Pregenerated sensors for BNC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000169594Ensembl transcript IDs: ENST00000345382.6, ENST00000345382.7, ENST00000569704.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGACCTTTAACACTGCAAGCCTCATTTAAAGCCACCCCCAGGTCCTaGGCCCACTGGTGTCGATCTGCAGACCTGGATCTGTCCCAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: RPLTLQASFKATPRS*AHWCRSADLDLSQG Trigger: TCCCTGGGACAGATCCAGGTCTGCAGATCGACACCAGTGGGCCCAGGACCTGGGGGTGGCTTTAAATGAGGCTTGCAGTGTTAAAGGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR CCA 90 bp | ACACTGCAAGCCTCATTTAAAGCCACCCCCAGGTCCTGGGCCCACTaGTGTCGATCTGCAGACCTGGATCTGTCCCAGGGAACATGTAAA | + |
|
Preference number: 1 (lower is better) Translates to: TLQASFKATPRSWAH*CRSADLDLSQGTCK Trigger: TTTACATGTTCCCTGGGACAGATCCAGGTCTGCAGATCGACACCAGTGGGCCCAGGACCTGGGGGTGGCTTTAAATGAGGCTTGCAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR TCA 90 bp | GTTAGAGGCCAACCCAATCCTCTGAGAACTCCCTGGGGTAACATATaGGACCTCTGGTGCAGGGCTGAGGGGAGGGACAATTATCCACTC | + |
|
Preference number: 1 (lower is better) Translates to: VRGQPNPLRTPWGNI*DLWCRAEGRDNYPL Trigger: GAGTGGATAATTGTCCCTCCCCTCAGCCCTGCACCAGAGGTCTCATATGTTACCCCAGGGAGTTCTCAGAGGATTGGGTTGGCCTCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR CCA 90 bp | AAGCCACCCCCAGGTCCTGGGCCCACTGGTGTCGATCTGCAGACCTaGATCTGTCCCAGGGAACATGTAAACAAATCTGGGAAAAATCAC | + |
|
Preference number: 1 (lower is better) Translates to: KPPPGPGPTGVDLQT*ICPREHVNKSGKNH Trigger: GTGATTTTTCCCAGATTTGTTTACATGTTCCCTGGGACAGATCCAGGTCTGCAGATCGACACCAGTGGGCCCAGGACCTGGGGGTGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR TCA 90 bp | GAACAAGAATTAACAAGGAACATGTTAGAGGCCAACCCAATCCTCTaGGAACTCCCTGGGGTAACATATGAGACCTCTGGTGCAGGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: EQELTRNMLEANPIL*ELPGVTYETSGAGL Trigger: CAGCCCTGCACCAGAGGTCTCATATGTTACCCCAGGGAGTTCTCAGAGGATTGGGTTGGCCTCTAACATGTTCCTTGTTAATTCTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR TCA 90 bp | CATTCCACAGGTGACCAAAAAGAACAGAGTTTGAAGTTCACCAAATaGAAACGAGCAGTGATTTTGACATTTAGGTCATCACTTGTTCTG | + |
|
Preference number: 1 (lower is better) Translates to: HSTGDQKEQSLKFTK*KRAVILTFRSSLVL Trigger: CAGAACAAGTGATGACCTAAATGTCAAAATCACTGCTCGTTTTCATTTGGTGAACTTCAAACTCTGTTCTTTTTGGTCACCTGTGGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR GCA 90 bp | TATCTACGGCAGAATATGTACAAATGTTCCTGCCAAAATCATGCTTaGATTCATTCCACAGGTGACCAAAAAGAACAGAGTTTGAAGTTC | + |
|
Preference number: 1 (lower is better) Translates to: YLRQNMYKCSCQNHA*IHSTGDQKEQSLKF Trigger: GAACTTCAAACTCTGTTCTTTTTGGTCACCTGTGGAATGAATGCAAGCATGATTTTGGCAGGAACATTTGTACATATTCTGCCGTAGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTCCTGGGCCCACTGGTGTCGATCTGCAGACCTGGATCTGTCCCAGGGAACAATAATAGGAAGGGCTaGCCCAGTGTCATCTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: QVLGPLVSICRPGSVPGNNNRKG*PSVIFP Trigger: TGGGAAGATGACACTGGGGCAGCCCTTCCTATTATT...GTTCCCTGGGACAGATCCAGGTCTGCAGATCGACACCAGTGGGCCCAGGACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTCCTGGGCCCACTGGTGTCGATCTGCAGACCTGGATCTGTCCCAGGGAACTTTTCCTTGTATCAGTaGAAGACCTCTTGGGCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: QVLGPLVSICRPGSVPGNFSLYQ*KTSWAK Trigger: CTTAGCCCAAGAGGTCTTTCACTGATACAAGGAAAA...GTTCCCTGGGACAGATCCAGGTCTGCAGATCGACACCAGTGGGCCCAGGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR TCA 90 bp | CTGAATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCTACCCTCTGGTGCAGGGCTaGGGGGAGGGACAATTATCC | + |
|
Preference number: 2 (lower is better) Translates to: LNFRRWFHSTGLTELPFYPLVQG*GEGQLS Trigger: GGATAATTGTCCCTCCCCTCAGCCCTGCACCAGAGG...GTAGAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR TCA 90 bp | GCAGTGATTTTGACATTTAGGTCATCACTTGTTCTGCTTCTGAGCAGAGATCCAGCCAACCCAATCCTCTaGGAACTCCCTGGGGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: AVILTFRSSLVLLLSRDPANPIL*ELPGVT Trigger: TGTTACCCCAGGGAGTTCTCAGAGGATTGGGTTGGC...TGGATCTCTGCTCAGAAGCAGAACAAGTGATGACCTAAATGTCAAAATCACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR CCA 90 bp | AATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCTACCATAGGTCCTGGGCCCACTaGTGTCGATCTGCAGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: NFRRWFHSTGLTELPFYHRSWAH*CRSADL Trigger: CAGGTCTGCAGATCGACACCAGTGGGCCCAGGACCT...ATGGTAGAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR TCA 90 bp | AATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCTACCATCCCTGGGGTAACATATaGGACCTCTGGTGCAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: NFRRWFHSTGLTELPFYHPWGNI*DLWCRA Trigger: AGCCCTGCACCAGAGGTCTCATATGTTACCCCAGGG...ATGGTAGAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR GCA 90 bp | CACAACAACCATCAGAACCACATTATCTACGGCAGAATATGTACAAATGTTCCTCCACTGGTGTCGATCTaGAGACCTGGATCTGTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: HNNHQNHIIYGRICTNVPPLVSI*RPGSVP Trigger: TGGGACAGATCCAGGTCTGCAGATCGACACCAGTGG...AGGAACATTTGTACATATTCTGCCGTAGATAATGTGGTTCTGATGGTTGTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTGAATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCGCAGAGATCCAGAGGTaGCACAGTGCAATATCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: MLNFRRWFHSTGLTELPFAEIQR*HSAISA Trigger: TGCAGATATTGCACTGTGTCACCTCTGGATCTCTGC...GAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATTCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR GCA 90 bp | ATGCTGAATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCCCAGAGGTGACACAGTaGAATATCTGCACTCACACC | + |
|
Preference number: 2 (lower is better) Translates to: MLNFRRWFHSTGLTELPFPEVTQ*NICTHT Trigger: GGTGTGAGTGCAGATATTGCACTGTGTCACCTCTGG...GAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATTCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR CCA 90 bp | AATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCTACCATGTCGATCTGCAGACCTaGATCTGTCCCAGGGAACAT | + |
|
Preference number: 2 (lower is better) Translates to: NFRRWFHSTGLTELPFYHVDLQT*ICPREH Trigger: ATGTTCCCTGGGACAGATCCAGGTCTGCAGATCGAC...ATGGTAGAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR GCA 90 bp | GCAGTGATTTTGACATTTAGGTCATCACTTGTTCTGCTTCTGAGCAGAGATCCAACACAGTGCAATATCTaGACTCACACCAAACACCAC | + |
|
Preference number: 2 (lower is better) Translates to: AVILTFRSSLVLLLSRDPTQCNI*THTKHH Trigger: GTGGTGTTTGGTGTGAGTGCAGATATTGCACTGTGT...TGGATCTCTGCTCAGAAGCAGAACAAGTGATGACCTAAATGTCAAAATCACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR CAA 90 bp | ATAGGAAGGGCTGCCCCAGTGTCATCTTCCCACGAGGTTTGTCTTTaGCTCATTGTGCTGTGGAAAACTATAAAGTCAAATCAAATACTT | + |
|
Preference number: 2 (lower is better) Translates to: IGRAAPVSSSHEVCL*LIVLWKTIKSNQIL Trigger: AAGTATTTGATTTGACTTTATAGTTTTCCACAGCACAATGAGCAAAAGACAAACCTCGTGGGAAGATGACACTGGGGCAGCCCTTCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTGAATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCTCAAATACTTTTGCCTaGCTCGCCCCAAATGATATG | + |
|
Preference number: 2 (lower is better) Translates to: MLNFRRWFHSTGLTELPFSNTFA*LAPNDM Trigger: CATATCATTTGGGGCGAGTCAGGCAAAAGTATTTGA...GAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATTCAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR GCA 90 bp | CTGAATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCTACTGCCAAAATCATGCTTaGATTCATTCCACAGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: LNFRRWFHSTGLTELPFYCQNHA*IHSTGD Trigger: GTCACCTGTGGAATGAATGCAAGCATGATTTTGGCA...GTAGAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR TCA 90 bp | CTGAATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCTACTTTCCCCTAGCTTCTTaGATGCATGTTACAGAACAA | + |
|
Preference number: 2 (lower is better) Translates to: LNFRRWFHSTGLTELPFYFPLAS*MHVTEQ Trigger: TTGTTCTGTAACATGCATTCAAGAAGCTAGGGGAAA...GTAGAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTGAATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCCATTCATTCCACAGGTaGCCAAAAAGAACAGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: MLNFRRWFHSTGLTELPFHSFHR*PKRTEF Trigger: AAACTCTGTTCTTTTTGGTCACCTGTGGAATGAATG...GAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATTCAGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR TCA 90 bp | AATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCTACCATCTGACTCGCCCCAAATaGTATGAAACAGAAACATTT | + |
|
Preference number: 2 (lower is better) Translates to: NFRRWFHSTGLTELPFYHLTRPK*YETETF Trigger: AAATGTTTCTGTTTCATATCATTTGGGGCGAGTCAG...ATGGTAGAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR GCA 90 bp | CACAACAACCATCAGAACCACATTATCTACGGCAGAATATGTACAAATGTTCCTACGAGGTTTGTCTTTTaGTCATTGTGCTGTGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HNNHQNHIIYGRICTNVPTRFVF*SLCCGK Trigger: TTTTCCACAGCACAATGAGCAAAAGACAAACCTCGT...AGGAACATTTGTACATATTCTGCCGTAGATAATGTGGTTCTGATGGTTGTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTTCACTTTGGGAAGACTGGAATATTAAACAGCTGGGTAACTAAACAGTTGTTGAAGTTCACCAAATaGAAACGAGCAGTGATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SFHFGKTGILNSWVTKQLLKFTK*KRAVIL Trigger: CAAAATCACTGCTCGTTTTCATTTGGTGAACTTCAA...CAACTGTTTAGTTACCCAGCTGTTTAATATTCCAGTCTTCCCAAAGTGAAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR CCA 72 bp | GCCTCATTTAAAGCCACCCCCAGGTCCTGGGCCCACTaGTGTCGATCTGCAGACCTGGATCTGTCCCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ASFKATPRSWAH*CRSADLDLSQG Trigger: TCCCTGGGACAGATCCAGGTCTGCAGATCGACACCAGTGGGCCCAGGACCTGGGGGTGGCTTTAAATGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGAATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCTTGGGGACTGGTATCTaGTCCACAGAGTCTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: MLNFRRWFHSTGLTELPFLGTGI*STESSS Trigger: GGAAGAAGACTCTGTGGACAAGATACCAGTCCCCAA...GAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATTCAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGAATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCATCTTCCCACGAGGTTaGTCTTTTGCTCATTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: MLNFRRWFHSTGLTELPFIFPRG*SFAHCA Trigger: AGCACAATGAGCAAAAGACAAACCTCGTGGGAAGAT...GAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATTCAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGAATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCTACACTGAAAATGCTGTTTaGGGGACTGGTATCTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LNFRRWFHSTGLTELPFYTENAV*GTGILS Trigger: GGACAAGATACCAGTCCCCAAAACAGCATTTTCAGT...GTAGAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR CAA 90 bp | AATTTTAGGAGATGGTTTCATTCCACAGGACTGACTGAACTTCCTTTCTACCATTCAAATCAAATACTTTaGCCTGACTCGCCCCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: NFRRWFHSTGLTELPFYHSNQIL*PDSPQM Trigger: CATTTGGGGCGAGTCAGGCAAAAGTATTTGATTTGA...ATGGTAGAAAGGAAGTTCAGTCAGTCCTGTGGAATGAAACCATCTCCTAAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR-3UTR CAA 90 bp | CTAATCTTATACGTTTATAAAACGGTGAAGACTGAGGGATCCAGTGATACTGAACACGAGGTTTGTCTTTaGCTCATTGTGCTGTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LILYVYKTVKTEGSSDTEHEVCL*LIVLWK Trigger: TTTCCACAGCACAATGAGCAAAAGACAAACCTCGTG...TTCAGTATCACTGGATCCCTCAGTCTTCACCGTTTTATAAACGTATAAGATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR TCA 72 bp | TTCCTGCCAAAATCATGCTTGCATTCATTCCACAGGTaGCCAAAAAGAACAGAGTTTGAAGTTCACCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: FLPKSCLHSFHR*PKRTEFEVHQM Trigger: CATTTGGTGAACTTCAAACTCTGTTCTTTTTGGTCACCTGTGGAATGAATGCAAGCATGATTTTGGCAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR TCA 72 bp | GGTGACCAAAAAGAACAGAGTTTGAAGTTCACCAAATaGAAACGAGCAGTGATTTTGACATTTAGGTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: GDQKEQSLKFTK*KRAVILTFRSS Trigger: TGATGACCTAAATGTCAAAATCACTGCTCGTTTTCATTTGGTGAACTTCAAACTCTGTTCTTTTTGGTCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| 3UTR TCA 72 bp | AGTCAAATCAAATACTTTTGCCTGACTCGCCCCAAATaGTATGAAACAGAAACATTTCTATGGACTACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SQIKYFCLTRPK*YETETFLWTTL Trigger: TAAAGTAGTCCATAGAAATGTTTCTGTTTCATATCATTTGGGGCGAGTCAGGCAAAAGTATTTGATTTGACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000345382.6 |
||
| CDS TCA 90 bp | TCAGATCTCCTTCACTCGCCTCGCCACAATCTTGTCACATCTGGCTaGCAAATCCCGAGGAACTCCGGCAAAGCCAGGCGGCGGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SDLLHSPRHNLVTSG*QIPRNSGKARRRRG Trigger: GCCCCGCCGCCGCCTGGCTTTGCCGGAGTTCCTCGGGATTTGTCAGCCAGATGTGACAAGATTGTGGCGAGGCGAGTGAAGGAGATCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569704.2 |
||
| CDS TCA 90 bp | AACCAGGGTAGCTGGGAGGAGGCCTACAGTCTGGGGACGTCACTGTaGAACCTGGGCACTTGTAGTTCTCAGAGCTGGCCAGGTTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NQGSWEEAYSLGTSL*NLGTCSSQSWPGSG Trigger: GCCTGAACCTGGCCAGCTCTGAGAACTACAAGTGCCCAGGTTTCACAGTGACGTCCCCAGACTGTAGGCCTCCTCCCAGCTACCCTGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | GGCCTGCTCAGGGGTTTGGCTGATGGCTCCACTGGACTCAATTACTaGTTCACGATGGCAGGGCCTCTCCCCTTCAGGGAAAGGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLLRGLADGSTGLNY*FTMAGPLPFRERLP Trigger: GGGAAGCCTTTCCCTGAAGGGGAGAGGCCCTGCCATCGTGAATCAGTAATTGAGTCCAGTGGAGCCATCAGCCAAACCCCTGAGCAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | GTAGCTGGGAGGAGGCCTACAGTCTGGGGACGTCACTGTGAAACCTaGGCACTTGTAGTTCTCAGAGCTGGCCAGGTTCAGGCTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VAGRRPTVWGRHCET*ALVVLRAGQVQAVP Trigger: AGGAACAGCCTGAACCTGGCCAGCTCTGAGAACTACAAGTGCCCAGGTTTCACAGTGACGTCCCCAGACTGTAGGCCTCCTCCCAGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | GGGGTTTGGCTGATGGCTCCACTGGACTCAATTACTGATTCACGATaGCAGGGCCTCTCCCCTTCAGGGAAAGGCTTCCCTAAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GVWLMAPLDSITDSR*QGLSPSGKGFPKPP Trigger: AGGAGGCTTAGGGAAGCCTTTCCCTGAAGGGGAGAGGCCCTGCCATCGTGAATCAGTAATTGAGTCCAGTGGAGCCATCAGCCAAACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | AATATCAGATCTCCTTCACTCGCCTCGCCACAATCTTGTCACATCTaGCTGACAAATCCCGAGGAACTCCGGCAAAGCCAGGCGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: NIRSPSLASPQSCHI*LTNPEELRQSQAAA Trigger: CGCCGCCGCCTGGCTTTGCCGGAGTTCCTCGGGATTTGTCAGCCAGATGTGACAAGATTGTGGCGAGGCGAGTGAAGGAGATCTGATATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569704.2 |
||
| CDS TCA 90 bp | CAGTCTCCCTCTCTGAATTGTGTGTGGCCTGCTCAGGGGTTTGGCTaGTGGCTCCACTGGACTCAATTACTGATTCACGATGGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSPSLNCVWPAQGFG*WLHWTQLLIHDGRA Trigger: GGCCCTGCCATCGTGAATCAGTAATTGAGTCCAGTGGAGCCATCAGCCAAACCCCTGAGCAGGCCACACACAATTCAGAGAGGGAGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | CCTTGGCACCATGATCAATGCTGGTGTCTGCTCAGTCTCCCTCTCTaGATTGTGTGTGGCCTGCTCAGGGGTTTGGCTGATGGCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: PWHHDQCWCLLSLPL*IVCGLLRGLADGST Trigger: AGTGGAGCCATCAGCCAAACCCCTGAGCAGGCCACACACAATTCAGAGAGGGAGACTGAGCAGACACCAGCATTGATCATGGTGCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | CTCACTCACCCCGTCAGAGTCCCAGGAAGAATGGCTGCTACTCTCTaGCTTCATGCTCGAGGTAGTGCTCAAATCCAGGATGGTGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LTHPVRVPGRMAATL*LHARGSAQIQDGAL Trigger: GAGGGCACCATCCTGGATTTGAGCACTACCTCGAGCATGAAGTCAGAGAGTAGCAGCCATTCTTCCTGGGACTCTGACGGGGTGAGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS GCA 90 bp | CTGTTCCTGAGGTCTTTGTCCCGGTTATTTCTGTTCATTGGCATGTaGAGCCGAGGGTTGGGGTTGGCGCTATGGCGATTCCGGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LFLRSLSRLFLFIGM*SRGLGLALWRFRLL Trigger: AAGGAGCCGGAATCGCCATAGCGCCAACCCCAACCCTCGGCTGCACATGCCAATGAACAGAAATAACCGGGACAAAGACCTCAGGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | TTTCTGTTCATTGGCATGTGCAGCCGAGGGTTGGGGTTGGCGCTATaGCGATTCCGGCTCCTTAGGGAGCTGAACACCATGTTACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: FLFIGMCSRGLGLAL*RFRLLRELNTMLHP Trigger: AGGGTGTAACATGGTGTTCAGCTCCCTAAGGAGCCGGAATCGCCATAGCGCCAACCCCAACCCTCGGCTGCACATGCCAATGAACAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | GTTCAGGCTGTTCCTGAGGTCTTTGTCCCGGTTATTTCTGTTCATTaGCATGTGCAGCCGAGGGTTGGGGTTGGCGCTATGGCGATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VQAVPEVFVPVISVH*HVQPRVGVGAMAIP Trigger: CGGAATCGCCATAGCGCCAACCCCAACCCTCGGCTGCACATGCCAATGAACAGAAATAACCGGGACAAAGACCTCAGGAACAGCCTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | AAGCCTCCTGACTGTACATGCTGCTCCTCAGATACTCTGTGTGACTaGGGACTGCAGGCCTCCTGCTCATCTTCACTGACCACCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPPDCTCCSSDTLCD*GLQASCSSSLTTCR Trigger: CCTACAGGTGGTCAGTGAAGATGAGCAGGAGGCCTGCAGTCCTCAGTCACACAGAGTATCTGAGGAGCAGCATGTACAGTCAGGAGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | AGCACAGTGCCTTCCTCACTCACCCCGTCAGAGTCCCAGGAAGAATaGCTGCTACTCTCTGACTTCATGCTCGAGGTAGTGCTCAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: STVPSSLTPSESQEE*LLLSDFMLEVVLKS Trigger: GGATTTGAGCACTACCTCGAGCATGAAGTCAGAGAGTAGCAGCCATTCTTCCTGGGACTCTGACGGGGTGAGTGAGGAAGGCACTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | CCAAGGCATGGAGGATCTGGAGAACCTCATCTTGCTTCAACACACTaGAGAGCCGGTCCAGTAGGATTTTTAGGCGAACGGGGATGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRHGGSGEPHLASTH*RAGPVGFLGERGWP Trigger: AGGCCATCCCCGTTCGCCTAAAAATCCTACTGGACCGGCTCTTCAGTGTGTTGAAGCAAGATGAGGTTCTCCAGATCCTCCATGCCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | TGCTGCAAGGTGGCCACTTCTTCCTCACTGGTCATGATGCTCCAGTaGTCCAACACCTTTCCTGATGCATCCTGCAGTACGTATCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: CCKVATSSSLVMMLQ*SNTFPDASCSTYPR Trigger: CCGTGGATACGTACTGCAGGATGCATCAGGAAAGGTGTTGGATCACTGGAGCATCATGACCAGTGAGGAAGAAGTGGCCACCTTGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | AAAGCACACCATTTTGCCCAATGTTTGGGAAGGCTGGTTGGCCTTTaGAATCCTCTCCTGAACCAGGGTAGCTGGGAGGAGGCCTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: KAHHFAQCLGRLVGL*NPLLNQGSWEEAYS Trigger: ACTGTAGGCCTCCTCCCAGCTACCCTGGTTCAGGAGAGGATTCCAAAGGCCAACCAGCCTTCCCAAACATTGGGCAAAATGGTGTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | GTTCCATGTAGTCAGAAAAAGGAACTTGGGGTTCCATCCCAGGTGTaGAGTAGTGTTCATGGCCACCATCCTCGACCTCCCTTGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: VPCSQKKELGVPSQV*SSVHGHHPRPPLAP Trigger: TGGTGCCAAGGGAGGTCGAGGATGGTGGCCATGAACACTACTTCACACCTGGGATGGAACCCCAAGTTCCTTTTTCTGACTACATGGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | TGGGATTCTGGCTGTGTCTGTTTCGACTGCGAACAGACGAAAACATaGTGTTGCAGCCTGGTACTTTGCATTTGTGGAGCTGCCGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WDSGCVCFDCEQTKT*CCSLVLCICGAAGG Trigger: ACCTCCGGCAGCTCCACAAATGCAAAGTACCAGGCTGCAACACCATGTTTTCGTCTGTTCGCAGTCGAAACAGACACAGCCAGAATCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | AACGAAGGAACTGCTGCAAGGTGGCCACTTCTTCCTCACTGGTCATaGTGCTCCAGTGATCCAACACCTTTCCTGATGCATCCTGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: NEGTAARWPLLPHWS*CSSDPTPFLMHPAV Trigger: TACTGCAGGATGCATCAGGAAAGGTGTTGGATCACTGGAGCATCATGACCAGTGAGGAAGAAGTGGCCACCTTGCAGCAGTTCCTTCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | GCCAGAGTTGTAGCTCTCCAGGCTGGCACTGTGGACTTGCGTTATTaGGTAAACCAGACTGCCCATTCGACTTGTTCCTTTGAAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARVVALQAGTVDLRY*VNQTAHSTCSFEDD Trigger: GTCATCTTCAAAGGAACAAGTCGAATGGGCAGTCTGGTTTACCCAATAACGCAAGTCCACAGTGCCAGCCTGGAGAGCTACAACTCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | GTTACTGGAGGTGACTTGGAGATGAGGCCAGGCTTTTGTGCAGGTTaGGATTCTGGCTGTGTCTGTTTCGACTGCGAACAGACGAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: VTGGDLEMRPGFCAG*DSGCVCFDCEQTKT Trigger: TGTTTTCGTCTGTTCGCAGTCGAAACAGACACAGCCAGAATCCCAACCTGCACAAAAGCCTGGCCTCATCTCCAAGTCACCTCCAGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | CTGACTTTGGTCATGACCCTGCTCCAACATATATTGTTCGGGCAATaGCCCTATCAGTGCAGGAGGCAGAGGGTTGAAGAACTGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTLVMTLLQHILFGQ*PYQCRRQRVEELER Trigger: CCTTTCCAGTTCTTCAACCCTCTGCCTCCTGCACTGATAGGGTCATTGCCCGAACAATATATGTTGGAGCAGGGTCATGACCAAAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | GAGCATACTTGGTTTGCCATCTTGTTACTGGAGGTGACTTGGAGATaGGGCCAGGCTTTTGTGCAGGTTGGGATTCTGGCTGTGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EHTWFAILLLEVTWR*GQAFVQVGILAVSV Trigger: AACAGACACAGCCAGAATCCCAACCTGCACAAAAGCCTGGCCTCATCTCCAAGTCACCTCCAGTAACAAGATGGCAAACCAAGTATGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS GCA 90 bp | AGGACTGGCTGGACTGTCTTTAGGTTGGGAAAAAGCACACCATTTTaGCCAATGTTTGGGAAGGCTGGTTGGCCTTTGGAATCCTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RTGWTVFRLGKSTPF*PMFGKAGWPLESSP Trigger: AGGAGAGGATTCCAAAGGCCAACCAGCCTTCCCAAACATTGGGCAAAATGGTGTGCTTTTTCCCAACCTAAAGACAGTCCAGCCAGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS GCA 90 bp | CCAGGCTTTTGTGCAGGTTGGGATTCTGGCTGTGTCTGTTTCGACTaGGAACAGACGAAAACATGGTGTTGCAGCCTGGTACTTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: PGFCAGWDSGCVCFD*EQTKTWCCSLVLCI Trigger: AATGCAAAGTACCAGGCTGCAACACCATGTTTTCGTCTGTTCGCAGTCGAAACAGACACAGCCAGAATCCCAACCTGCACAAAAGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | TTACTTAGAGCGTGGGCCACCCATCCATGCTTGCATTGGTCACACTaGCGGTGGTTTATTTTCCCGGGTTTGAAACTTTGGCAACTACAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRAWATHPCLHWSH*RWFIFPGLKLWQLQ Trigger: CTGTAGTTGCCAAAGTTTCAAACCCGGGAAAATAAACCACCGTCAGTGTGACCAATGCAAGCATGGATGGGTGGCCCACGCTCTAAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS GCA 90 bp | GCCATGAGTTCAACTATAGATTTGGTCTCTCCAAAACGAAGGAACTaGTGCAAGGTGGCCACTTCTTCCTCACTGGTCATGATGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AMSSTIDLVSPKRRN*CKVATSSSLVMMLQ Trigger: CTGGAGCATCATGACCAGTGAGGAAGAAGTGGCCACCTTGCAGCAGTTCCTTCGTTTTGGAGAGACCAAATCTATAGTTGAACTCATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | TCGGGCAATGACCCTATCAGTGCAGGAGGCAGAGGGTTGAAGAACTaGAAAGGCAGCATGAAAGTCATGTTGCTTATGAGGTTCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGNDPISAGGRGLKN*KGSMKVMLLMRFSK Trigger: CTTTGAGAACCTCATAAGCAACATGACTTTCATGCTGCCTTTCCAGTTCTTCAACCCTCTGCCTCCTGCACTGATAGGGTCATTGCCCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | TGGATTTCTTCTTGGGAAGGGCATCAAATGGCATTTCGTTTGAAATaGGCTGTTCTGGGATTGAAGAGGACAACAGCGGGAGGGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: WISSWEGHQMAFRLK*AVLGLKRTTAGGKG Trigger: TCCCTTCCCTCCCGCTGTTGTCCTCTTCAATCCCAGAACAGCTCATTTCAAACGAAATGCCATTTGATGCCCTTCCCAAGAAGAAATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | TGTTTCTACACCGCATTTGTGAAAGTTTGGCTCGGAGCTACGCGCTaGTTAATATCAGATCTCCTTCACTCGCCTCGCCACAATCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CFYTAFVKVWLGATR*LISDLLHSPRHNLV Trigger: GACAAGATTGTGGCGAGGCGAGTGAAGGAGATCTGATATTAATCAGCGCGTAGCTCCGAGCCAAACTTTCACAAATGCGGTGTAGAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569704.2 |
||
| CDS GCA 90 bp | CACATCCTGATAGGCTTCCTTAGCCACATCTTTCAGAAGGTAAGCTaGACGGAAATGATCTTCACTACTCTCCAATGCTTCCTGGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HILIGFLSHIFQKVS*TEMIFTTLQCFLAQ Trigger: TTGAGCCAGGAAGCATTGGAGAGTAGTGAAGATCATTTCCGTGCAGCTTACCTTCTGAAAGATGTGGCTAAGGAAGCCTATCAGGATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | CATCCGGACAGTTTAAACACTGATCTTTTTCAACCTGAAATGGTGTaGAACTGGAAGTTAAGAAGCTGCTGTCAGGGAAGGGCCCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: HPDSLNTDLFQPEMV*NWKLRSCCQGRAHG Trigger: TCCATGGGCCCTTCCCTGACAGCAGCTTCTTAACTTCCAGTTCCACACCATTTCAGGTTGAAAAAGATCAGTGTTTAAACTGTCCGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS GCA 90 bp | ACTCCTGTGACTGCAGCTCTCGATGAAAGCCCTGATATCTACATTTaGTGTGGAAGGTGGTATGATGATGGATTGCTCTTCTTTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TPVTAALDESPDIYI*CGRWYDDGLLFFLL Trigger: CAAGAGAAAGAAGAGCAATCCATCATCATACCACCTTCCACAGCAAATGTAGATATCAGGGCTTTCATCGAGAGCTGCAGTCACAGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 90 bp | GACAGTTTAAACACTGATCTTTTTCAACCTGAAATGGTGTGGAACTaGAAGTTAAGAAGCTGCTGTCAGGGAAGGGCCCATGGACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DSLNTDLFQPEMVWN*KLRSCCQGRAHGLP Trigger: AGGAAGTCCATGGGCCCTTCCCTGACAGCAGCTTCTTAACTTCCAGTTCCACACCATTTCAGGTTGAAAAAGATCAGTGTTTAAACTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | TCACACTGGAAGCGATTTTCTTCTATCTGCCTTGCTAATGCATGCTaGCCCACGTGCTCCAGTTCTTTAGAATCTTCAAGACAAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SHWKRFSSICLANAC*PTCSSSLESSRQGK Trigger: TTTTCCTTGTCTTGAAGATTCTAAAGAACTGGAGCACGTGGGTCAGCATGCATTAGCAAGGCAGATAGAAGAAAATCGCTTCCAGTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 90 bp | TTTGCTGTGGAAGGTGGTATGATGATGGATTGCTCTTCTTTCTCTTaGATTGCCATGAGTTCAACTATAGATTTGGTCTCTCCAAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: FAVEGGMMMDCSSFS*IAMSSTIDLVSPKR Trigger: TCGTTTTGGAGAGACCAAATCTATAGTTGAACTCATGGCAATTCAAGAGAAAGAAGAGCAATCCATCATCATACCACCTTCCACAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS GCA 90 bp | TGTGGAAGGTGGTATGATGATGGATTGCTCTTCTTTCTCTTGAATTaGCATGAGTTCAACTATAGATTTGGTCTCTCCAAAACGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CGRWYDDGLLFFLLN*HEFNYRFGLSKTKE Trigger: TTCCTTCGTTTTGGAGAGACCAAATCTATAGTTGAACTCATGGCAATTCAAGAGAAAGAAGAGCAATCCATCATCATACCACCTTCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 90 bp | TTGAAGAGGACAACAGCGGGAGGGAAGGGAGTATCCCAGGCGTGTTaGCTACCTCGGCAGGCGTGGCTGGACTGCGGTAGAAAGGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LKRTTAGGKGVSQAC*LPRQAWLDCGRKEG Trigger: TCCTTCCTTTCTACCGCAGTCCAGCCACGCCTGCCGAGGTAGCAAACACGCCTGGGATACTCCCTTCCCTCCCGCTGTTGTCCTCTTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 72 bp | CTTCACTCGCCTCGCCACAATCTTGTCACATCTGGCTaGCAAATCCCGAGGAACTCCGGCAAAGCCAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LHSPRHNLVTSG*QIPRNSGKARR Trigger: CCGCCTGGCTTTGCCGGAGTTCCTCGGGATTTGTCAGCCAGATGTGACAAGATTGTGGCGAGGCGAGTGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569704.2 |
||
| CDS CCA 72 bp | CAAGGCTCTGGTCAGCCTTCTCCATCAGGACACAGATaGGGTACTCATCTTCCCCAGGGACAAGGCTCGACC | + |
|
Preference number: 6 (lower is better) Translates to: QGSGQPSPSGHR*GTHLPQGQGST Trigger: GGTCGAGCCTTGTCCCTGGGGAAGATGAGTACCCCATCTGTGTCCTGATGGAGAAGGCTGACCAGAGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 72 bp | TTTCTGTTCATTGGCATGTGCAGCCGAGGGTTGGGGTaGGCGCTATGGCGATTCCGGCTCCTTAGGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLFIGMCSRGLG*ALWRFRLLREL Trigger: CAGCTCCCTAAGGAGCCGGAATCGCCATAGCGCCAACCCCAACCCTCGGCTGCACATGCCAATGAACAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 90 bp | TCCCGGTTATTTCTGTTCATTGGCATGTGCAGCCGAGGGTTGGGGTaGGCGCTATGGCGATTCCGGCTCCTTAGGGAGCTGAACACCATG | + |
|
Preference number: 6 (lower is better) Translates to: SRLFLFIGMCSRGLG*ALWRFRLLRELNTM Trigger: CATGGTGTTCAGCTCCCTAAGGAGCCGGAATCGCCATAGCGCCAACCCCAACCCTCGGCTGCACATGCCAATGAACAGAAATAACCGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 72 bp | GGTTATTTCTGTTCATTGGCATGTGCAGCCGAGGGTTaGGGTTGGCGCTATGGCGATTCCGGCTCCTTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GYFCSLACAAEG*GWRYGDSGSLG Trigger: CCCTAAGGAGCCGGAATCGCCATAGCGCCAACCCCAACCCTCGGCTGCACATGCCAATGAACAGAAATAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 72 bp | CCTCGCTCAAGGGGCCAGAGTTGTAGCTCTCCAGGCTaGCACTGTGGACTTGCGTTATTGGGTAAACCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PRSRGQSCSSPG*HCGLALLGKPD Trigger: GTCTGGTTTACCCAATAACGCAAGTCCACAGTGCCAGCCTGGAGAGCTACAACTCTGGCCCCTTGAGCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 72 bp | GTTATGGGCAACCCAGAAGGCAGGCTAGCAAGGCTCTaGTCAGCCTTCTCCATCAGGACACAGATGGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: VMGNPEGRLARL*SAFSIRTQMGY Trigger: GTACCCCATCTGTGTCCTGATGGAGAAGGCTGACCAGAGCCTTGCTAGCCTGCCTTCTGGGTTGCCCATAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 72 bp | AGGGGTTTGGCTGATGGCTCCACTGGACTCAATTACTaGTTCACGATGGCAGGGCCTCTCCCCTTCAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RGLADGSTGLNY*FTMAGPLPFRE Trigger: TTCCCTGAAGGGGAGAGGCCCTGCCATCGTGAATCAGTAATTGAGTCCAGTGGAGCCATCAGCCAAACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 72 bp | CCTTCCTCACTCACCCCGTCAGAGTCCCAGGAAGAATaGCTGCTACTCTCTGACTTCATGCTCGAGGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PSSLTPSESQEE*LLLSDFMLEVV Trigger: CACTACCTCGAGCATGAAGTCAGAGAGTAGCAGCCATTCTTCCTGGGACTCTGACGGGGTGAGTGAGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 72 bp | TCTCCTTCACTCGCCTCGCCACAATCTTGTCACATCTaGCTGACAAATCCCGAGGAACTCCGGCAAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPSLASPQSCHI*LTNPEELRQSQ Trigger: CTGGCTTTGCCGGAGTTCCTCGGGATTTGTCAGCCAGATGTGACAAGATTGTGGCGAGGCGAGTGAAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569704.2 |
||
| CDS TCA 72 bp | GGTTGGCGCTATGGCGATTCCGGCTCCTTAGGGAGCTaGACACCATGTTACACCCTTCGATGGTGCACTTAT | + |
|
Preference number: 6 (lower is better) Translates to: GWRYGDSGSLGS*TPCYTLRWCTY Trigger: ATAAGTGCACCATCGAAGGGTGTAACATGGTGTTCAGCTCCCTAAGGAGCCGGAATCGCCATAGCGCCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS GCA 72 bp | AGGTCTTTGTCCCGGTTATTTCTGTTCATTGGCATGTaGAGCCGAGGGTTGGGGTTGGCGCTATGGCGATTC | + |
|
Preference number: 6 (lower is better) Translates to: RSLSRLFLFIGM*SRGLGLALWRF Trigger: GAATCGCCATAGCGCCAACCCCAACCCTCGGCTGCACATGCCAATGAACAGAAATAACCGGGACAAAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 72 bp | GTTCCTGAGGTCTTTGTCCCGGTTATTTCTGTTCATTaGCATGTGCAGCCGAGGGTTGGGGTTGGCGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: VPEVFVPVISVH*HVQPRVGVGAM Trigger: CATAGCGCCAACCCCAACCCTCGGCTGCACATGCCAATGAACAGAAATAACCGGGACAAAGACCTCAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 72 bp | TCGACTGCGAACAGACGAAAACATGGTGTTGCAGCCTaGTACTTTGCATTTGTGGAGCTGCCGGAGGTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: STANRRKHGVAA*YFAFVELPEVH Trigger: GTGCACCTCCGGCAGCTCCACAAATGCAAAGTACCAGGCTGCAACACCATGTTTTCGTCTGTTCGCAGTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 72 bp | GCCAGAGTTGTAGCTCTCCAGGCTGGCACTGTGGACTaGCGTTATTGGGTAAACCAGACTGCCCATTCGACT | + |
|
Preference number: 6 (lower is better) Translates to: ARVVALQAGTVD*RYWVNQTAHST Trigger: AGTCGAATGGGCAGTCTGGTTTACCCAATAACGCAAGTCCACAGTGCCAGCCTGGAGAGCTACAACTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 90 bp | CATAGAAGGTCTTCTCACATGCAGTGCAGAACACCCGGCCCTTCTTaGTACCAAGGCTATTCCTCTCAGGCTTCACTTTGGCCTCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HRRSSHMQCRTPGPS*YQGYSSQASLWPQG Trigger: CCCCTGAGGCCAAAGTGAAGCCTGAGAGGAATAGCCTTGGTACAAAGAAGGGCCGGGTGTTCTGCACTGCATGTGAGAAGACCTTCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 90 bp | GCTCAAGGGGCCAGAGTTGTAGCTCTCCAGGCTGGCACTGTGGACTaGCGTTATTGGGTAAACCAGACTGCCCATTCGACTTGTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AQGARVVALQAGTVD*RYWVNQTAHSTCSF Trigger: AAAGGAACAAGTCGAATGGGCAGTCTGGTTTACCCAATAACGCAAGTCCACAGTGCCAGCCTGGAGAGCTACAACTCTGGCCCCTTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 72 bp | GCGTGGGCCACCCATCCATGCTTGCATTGGTCACACTaGCGGTGGTTTATTTTCCCGGGTTTGAAACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AWATHPCLHWSH*RWFIFPGLKLW Trigger: CCAAAGTTTCAAACCCGGGAAAATAAACCACCGTCAGTGTGACCAATGCAAGCATGGATGGGTGGCCCACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 72 bp | CCCGTCAGAGTCCCAGGAAGAATGGCTGCTACTCTCTaGCTTCATGCTCGAGGTAGTGCTCAAATCCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PVRVPGRMAATL*LHARGSAQIQD Trigger: ATCCTGGATTTGAGCACTACCTCGAGCATGAAGTCAGAGAGTAGCAGCCATTCTTCCTGGGACTCTGACGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 72 bp | GGAGATGAGGCCAGGCTTTTGTGCAGGTTGGGATTCTaGCTGTGTCTGTTTCGACTGCGAACAGACGAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GDEARLLCRLGF*LCLFRLRTDEN Trigger: GTTTTCGTCTGTTCGCAGTCGAAACAGACACAGCCAGAATCCCAACCTGCACAAAAGCCTGGCCTCATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 72 bp | TCAGAGCTGGCCAGGTTCAGGCTGTTCCTGAGGTCTTaGTCCCGGTTATTTCTGTTCATTGGCATGTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SELARFRLFLRS*SRLFLFIGMCS Trigger: GCTGCACATGCCAATGAACAGAAATAACCGGGACAAAGACCTCAGGAACAGCCTGAACCTGGCCAGCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 90 bp | TTCTGGCTGTGTCTGTTTCGACTGCGAACAGACGAAAACATGGTGTaGCAGCCTGGTACTTTGCATTTGTGGAGCTGCCGGAGGTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: FWLCLFRLRTDENMV*QPGTLHLWSCRRCT Trigger: TGTGCACCTCCGGCAGCTCCACAAATGCAAAGTACCAGGCTGCAACACCATGTTTTCGTCTGTTCGCAGTCGAAACAGACACAGCCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 72 bp | GGAGGATCTGGAGAACCTCATCTTGCTTCAACACACTaGAGAGCCGGTCCAGTAGGATTTTTAGGCGAACGG | + |
|
Preference number: 6 (lower is better) Translates to: GGSGEPHLASTH*RAGPVGFLGER Trigger: CCGTTCGCCTAAAAATCCTACTGGACCGGCTCTTCAGTGTGTTGAAGCAAGATGAGGTTCTCCAGATCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 72 bp | TGGTTTGCCATCTTGTTACTGGAGGTGACTTGGAGATaGGGCCAGGCTTTTGTGCAGGTTGGGATTCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WFAILLLEVTWR*GQAFVQVGILA Trigger: AGCCAGAATCCCAACCTGCACAAAAGCCTGGCCTCATCTCCAAGTCACCTCCAGTAACAAGATGGCAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 72 bp | ACCGCATTTGTGAAAGTTTGGCTCGGAGCTACGCGCTaGTTAATATCAGATCTCCTTCACTCGCCTCGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: TAFVKVWLGATR*LISDLLHSPRH Trigger: GTGGCGAGGCGAGTGAAGGAGATCTGATATTAATCAGCGCGTAGCTCCGAGCCAAACTTTCACAAATGCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569704.2 |
||
| CDS GCA 72 bp | CAGTCCAAGGCATGGAGGATCTGGAGAACCTCATCTTaGTTCAACACACTGAAGAGCCGGTCCAGTAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: QSKAWRIWRTSS*FNTLKSRSSRI Trigger: AATCCTACTGGACCGGCTCTTCAGTGTGTTGAAGCAAGATGAGGTTCTCCAGATCCTCCATGCCTTGGACTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS GCA 72 bp | CAACCTGAAATGGTGTGGAACTGGAAGTTAAGAAGCTaGTGTCAGGGAAGGGCCCATGGACTTCCTGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QPEMVWNWKLRS*CQGRAHGLPVW Trigger: CCAAACAGGAAGTCCATGGGCCCTTCCCTGACAGCAGCTTCTTAACTTCCAGTTCCACACCATTTCAGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 72 bp | TCTTCTCACATGCAGTGCAGAACACCCGGCCCTTCTTaGTACCAAGGCTATTCCTCTCAGGCTTCACTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSHMQCRTPGPS*YQGYSSQASLW Trigger: CCAAAGTGAAGCCTGAGAGGAATAGCCTTGGTACAAAGAAGGGCCGGGTGTTCTGCACTGCATGTGAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 72 bp | TGTCTGTTTCGACTGCGAACAGACGAAAACATGGTGTaGCAGCCTGGTACTTTGCATTTGTGGAGCTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: CLFRLRTDENMV*QPGTLHLWSCR Trigger: CCGGCAGCTCCACAAATGCAAAGTACCAGGCTGCAACACCATGTTTTCGTCTGTTCGCAGTCGAAACAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 90 bp | GGACTGTCTTTAGGTTGGGAAAAAGCACACCATTTTGCCCAATGTTaGGGAAGGCTGGTTGGCCTTTGGAATCCTCTCCTGAACCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GLSLGWEKAHHFAQC*GRLVGLWNPLLNQG Trigger: ACCCTGGTTCAGGAGAGGATTCCAAAGGCCAACCAGCCTTCCCAAACATTGGGCAAAATGGTGTGCTTTTTCCCAACCTAAAGACAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 72 bp | GTCATGACCCTGCTCCAACATATATTGTTCGGGCAATaGCCCTATCAGTGCAGGAGGCAGAGGGTTGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VMTLLQHILFGQ*PYQCRRQRVEE Trigger: TTCTTCAACCCTCTGCCTCCTGCACTGATAGGGTCATTGCCCGAACAATATATGTTGGAGCAGGGTCATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 72 bp | TCTCTGAATTGTGTGTGGCCTGCTCAGGGGTTTGGCTaGTGGCTCCACTGGACTCAATTACTGATTCACGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLNCVWPAQGFG*WLHWTQLLIHD Trigger: ATCGTGAATCAGTAATTGAGTCCAGTGGAGCCATCAGCCAAACCCCTGAGCAGGCCACACACAATTCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS TCA 72 bp | CTGAGCATACTTGGTTTGCCATCTTGTTACTGGAGGTaGCTTGGAGATGAGGCCAGGCTTTTGTGCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSILGLPSCYWR*LGDEARLLCRL Trigger: CAACCTGCACAAAAGCCTGGCCTCATCTCCAAGTCACCTCCAGTAACAAGATGGCAAACCAAGTATGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 72 bp | GGCTGTGTCTGTTTCGACTGCGAACAGACGAAAACATaGTGTTGCAGCCTGGTACTTTGCATTTGTGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCVCFDCEQTKT*CCSLVLCICGA Trigger: AGCTCCACAAATGCAAAGTACCAGGCTGCAACACCATGTTTTCGTCTGTTCGCAGTCGAAACAGACACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 72 bp | GTGGGCCCTAAAGGTCCCTTTGTTACTGTATGTCTTTaGGCAGAGATGACAGGTTATGGGCAACCCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VGPKGPFVTVCL*AEMTGYGQPRR Trigger: CCTTCTGGGTTGCCCATAACCTGTCATCTCTGCCAAAAGACATACAGTAACAAAGGGACCTTTAGGGCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 90 bp | GCATTGGTCACACTGACGGTGGTTTATTTTCCCGGGTTTGAAACTTaGGCAACTACAGTTCAGAGTACAGCTGATAGCCTCGGCCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: ALVTLTVVYFPGFET*ATTVQSTADSLGHP Trigger: AGGATGGCCGAGGCTATCAGCTGTACTCTGAACTGTAGTTGCCAAAGTTTCAAACCCGGGAAAATAAACCACCGTCAGTGTGACCAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000345382.7 |
||
| CDS CAA 90 bp | GCCCATTCGACTTGTTCCTTTGAAGATGACAGATGTCTGGGAGGCTaGCTGTGTAAAAGCCACATCCTGATAGGCTTCCTTAGCCACATC | + |
|
Preference number: 6 (lower is better) Translates to: AHSTCSFEDDRCLGG*LCKSHILIGFLSHI Trigger: GATGTGGCTAAGGAAGCCTATCAGGATGTGGCTTTTACACAGCAAGCCTCCCAGACATCTGTCATCTTCAAAGGAACAAGTCGAATGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 72 bp | CTACTCTCCAATGCTTCCTGGCTCAATGCTTTTTGGTaGAGGTTTAGGTTTGAGCTGTGTCTGTCTCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLSNASWLNAFW*RFRFELCLSLL Trigger: GAGCAGAGACAGACACAGCTCAAACCTAAACCTCCACCAAAAAGCATTGAGCCAGGAAGCATTGGAGAGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 72 bp | TTAGGTTGGGAAAAAGCACACCATTTTGCCCAATGTTaGGGAAGGCTGGTTGGCCTTTGGAATCCTCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGWEKAHHFAQC*GRLVGLWNPLL Trigger: CAGGAGAGGATTCCAAAGGCCAACCAGCCTTCCCAAACATTGGGCAAAATGGTGTGCTTTTTCCCAACCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 90 bp | GCATTGGTCACACTGACGGTGGTTTATTTTCCCGGGTTTGAAACTTaGGCAACTACAGTTCAGAGTACAGCTGATAGCTGTCAGACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: ALVTLTVVYFPGFET*ATTVQSTADSCQTR Trigger: CCGAGTCTGACAGCTATCAGCTGTACTCTGAACTGTAGTTGCCAAAGTTTCAAACCCGGGAAAATAAACCACCGTCAGTGTGACCAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569704.2 |
||
| CDS TCA 72 bp | TCTTGGGAAGGGCATCAAATGGCATTTCGTTTGAAATaGGCTGTTCTGGGATTGAAGAGGACAACAGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SWEGHQMAFRLK*AVLGLKRTTAG Trigger: TCCCGCTGTTGTCCTCTTCAATCCCAGAACAGCTCATTTCAAACGAAATGCCATTTGATGCCCTTCCCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS GCA 72 bp | ACTATAGATTTGGTCTCTCCAAAACGAAGGAACTGCTaGAAGGTGGCCACTTCTTCCTCACTGGTCATGATG | + |
|
Preference number: 6 (lower is better) Translates to: TIDLVSPKRRNC*KVATSSSLVMM Trigger: CATCATGACCAGTGAGGAAGAAGTGGCCACCTTGCAGCAGTTCCTTCGTTTTGGAGAGACCAAATCTATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS GCA 72 bp | TCAACTATAGATTTGGTCTCTCCAAAACGAAGGAACTaGTGCAAGGTGGCCACTTCTTCCTCACTGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: STIDLVSPKRRN*CKVATSSSLVM Trigger: CATGACCAGTGAGGAAGAAGTGGCCACCTTGCAGCAGTTCCTTCGTTTTGGAGAGACCAAATCTATAGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 72 bp | AGATGTCACACTGGAAGCGATTTTCTTCTATCTGCCTaGCTAATGCATGCTGACCCACGTGCTCCAGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RCHTGSDFLLSA*LMHADPRAPVL Trigger: AAGAACTGGAGCACGTGGGTCAGCATGCATTAGCAAGGCAGATAGAAGAAAATCGCTTCCAGTGTGACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS GCA 72 bp | ACTGCAGCTCTCGATGAAAGCCCTGATATCTACATTTaGTGTGGAAGGTGGTATGATGATGGATTGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TAALDESPDIYI*CGRWYDDGLLF Trigger: GAAGAGCAATCCATCATCATACCACCTTCCACAGCAAATGTAGATATCAGGGCTTTCATCGAGAGCTGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CCA 72 bp | AACACTGATCTTTTTCAACCTGAAATGGTGTGGAACTaGAAGTTAAGAAGCTGCTGTCAGGGAAGGGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: NTDLFQPEMVWN*KLRSCCQGRAH Trigger: ATGGGCCCTTCCCTGACAGCAGCTTCTTAACTTCCAGTTCCACACCATTTCAGGTTGAAAAAGATCAGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 72 bp | ACTTGTTCCTTTGAAGATGACAGATGTCTGGGAGGCTaGCTGTGTAAAAGCCACATCCTGATAGGCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TCSFEDDRCLGG*LCKSHILIGFL Trigger: AAGGAAGCCTATCAGGATGTGGCTTTTACACAGCAAGCCTCCCAGACATCTGTCATCTTCAAAGGAACAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 90 bp | GCCTTAAATGAGAAGAACATGTTTCTACACCGCATTTGTGAAAGTTaGGCTCGGAGCTACGCGCTGATTAATATCAGATCTCCTTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: ALNEKNMFLHRICES*ARSYALINIRSPSL Trigger: GAGTGAAGGAGATCTGATATTAATCAGCGCGTAGCTCCGAGCCAAACTTTCACAAATGCGGTGTAGAAACATGTTCTTCTCATTTAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569704.2 |
||
| CDS CAA 72 bp | GGGGATAACTGTGTCCTTTCAAACTTAGTGACAATGTaGTATGAGCTGGAGTCACTTAAATGGGTGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GDNCVLSNLVTM*YELESLKWVLS Trigger: AGACAGCACCCATTTAAGTGACTCCAGCTCATACAACATTGTCACTAAGTTTGAAAGGACACAGTTATCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 72 bp | GAGAAGAACATGTTTCTACACCGCATTTGTGAAAGTTaGGCTCGGAGCTACGCGCTGATTAATATCAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: EKNMFLHRICES*ARSYALINIRS Trigger: AGATCTGATATTAATCAGCGCGTAGCTCCGAGCCAAACTTTCACAAATGCGGTGTAGAAACATGTTCTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569704.2 |
||
| CDS CAA 90 bp | ATTTGCTGTGGAAGGTGGTATGATGATGGATTGCTCTTCTTTCTCTaGAATTGCCATGAGTTCAACTATAGATTTGGTCTCTCCAAAACG | + |
|
Preference number: 6 (lower is better) Translates to: ICCGRWYDDGLLFFL*NCHEFNYRFGLSKT Trigger: CGTTTTGGAGAGACCAAATCTATAGTTGAACTCATGGCAATTCAAGAGAAAGAAGAGCAATCCATCATCATACCACCTTCCACAGCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 72 bp | GGAAGGTGGTATGATGATGGATTGCTCTTCTTTCTCTaGAATTGCCATGAGTTCAACTATAGATTTGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GRWYDDGLLFFL*NCHEFNYRFGL Trigger: GAGACCAAATCTATAGTTGAACTCATGGCAATTCAAGAGAAAGAAGAGCAATCCATCATCATACCACCTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS CAA 72 bp | ATTTTGATAGGCATACTGGACTTCCTGGATTTCTTCTaGGGAAGGGCATCAAATGGCATTTCGTTTGAAATG | + |
|
Preference number: 6 (lower is better) Translates to: ILIGILDFLDFF*GRASNGISFEM Trigger: CATTTCAAACGAAATGCCATTTGATGCCCTTCCCAAGAAGAAATCCAGGAAGTCCAGTATGCCTATCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||
| CDS GCA 72 bp | TGGTATGATGATGGATTGCTCTTCTTTCTCTTGAATTaGCATGAGTTCAACTATAGATTTGGTCTCTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: WYDDGLLFFLLN*HEFNYRFGLSK Trigger: TTTGGAGAGACCAAATCTATAGTTGAACTCATGGCAATTCAAGAGAAAGAAGAGCAATCCATCATCATACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000345382.7 ENST00000569704.2 |
||