RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BMX (Homo sapiens)

Ensembl gene IDs: ENSG00000102010

Ensembl transcript IDs: ENST00000342014.6, ENST00000348343.11, ENST00000357607.6, ENST00000463891.1, ENST00000489983.1

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTaGAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAG +
Preference number: 1 (lower is better)
Translates to: FCSVFTHEHSLYIAV*KCASAIGWKVLYQE
Trigger: CTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
3UTR-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAACTACTTTCCTTAAAATaGATGAAAATGCTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQLLSLK*MKMLAS
Trigger: GCTGGCCAGCATTTTCATTCATTTTAAGGAAAGTAG...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
3UTR-3UTR TCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCACTACTTTCCTTAAAATaGATGAAAATGCTGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LYCSLKMCFCYRLESVISLLSLK*MKMLAS
Trigger: GCTGGCCAGCATTTTCATTCATTTTAAGGAAAGTAG...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
3UTR TCA 72 bp GTCTTTACACATGAACACAGTCTCTATATTGCAGTCTaGAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTA +
Preference number: 3 (lower is better)
Translates to: VFTHEHSLYIAV*KCASAIGWKVL
Trigger: TAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCATGTTCCGTGCTTGCCTaGGTCCGCCGCGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGACSVLA*VRRGAW
Trigger: CCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACA...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS-3UTR GCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCATCTCAGCTTGTTCCGTaGTTGCCTGGGTCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGASQLVP*LPGSAA
Trigger: CGCGGCGGACCCAGGCAAGCACGGAACAAGCTGAGA...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS-3UTR TCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACTTGTTGGCCTTTGTTaGCACAGGGTGGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGALVGLC*HRVAEP
Trigger: CGGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATCCGCGGTGCTTGGTCTaGTGTTGCAGGAACACGGCC +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNPRCLV*CCRNTA
Trigger: GGCCGTGTTCCTGCAACAGCAGACCAAGCACCGCGG...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS-3UTR GCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCACTGGGTCCGCCGCGGTaGTTGGTCTGCTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISLGPPR*LVCCCR
Trigger: CCTGCAACAGCAGACCAAGCACCGCGGCGGACCCAG...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATAGCTTGTTCCGTGCTTaGCTGGGTCCGCCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENSLFRA*LGPPRC
Trigger: GCACCGCGGCGGACCCAGGCAAGCACGGAACAAGCT...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS-3UTR TCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAACCCACTATGGTACTTaGCCAGCAGGTGGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGATHYGT*PAGGGY
Trigger: GTAACCCCCACCTGCTGGTCAAGTACCATAGTGGGT...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAGCTGCTTCCCCAGGCTaGACACCTCCCACATCAGGA +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQAASPG*TPPTSG
Trigger: TCCTGATGTGGGAGGTGTTCAGCCTGGGGAAGCAGC...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATTGCTTGGTCTGCTGTTaGAGGAACACGGCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNCLVCC*RNTAPA
Trigger: AGCCGGGGCCGTGTTCCTGCAACAGCAGACCAAGCA...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAGGTGGCGGAGCCGTGTaGTCATGCCTGCTGAATTGT +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQGGGAV*SCLLNC
Trigger: ACAATTCAGCAGGCATGATCACACGGCTCCGCCACC...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATCTTGTTGGCCTTTGTTaGCACAGGGTGGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENLVGLC*HRVAEP
Trigger: CGGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAG...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCACTTGTTGGCCTTTGTTaGCACAGGGTGGCGGAGCCG +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISLVGLC*HRVAEP
Trigger: CGGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAG...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGCTGCTTCCCCAGGCTaGACACCTCCCACATCAGGA +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISAASPG*TPPTSG
Trigger: TCCTGATGTGGGAGGTGTTCAGCCTGGGGAAGCAGC...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCTTTACAGCTCTGCTaGCAACACAGGAACTTCCCG +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAALQLC*QHRNFP
Trigger: CGGGAAGTTCCTGTGTTGCCAGCAGAGCTGTAAAGC...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACTTCAGCACTCTGTCTaGGAAGGTGGGAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGALQHSV*EGGNSV
Trigger: CACAGAGTTCCCACCTTCCCAGACAGAGTGCTGAAG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAAGTCGGGGACCTTGTTaGCCTTTGTTGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGASRGPC*PLLTQG
Trigger: ACCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACT...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGTCCGCCGCGGTGCTTaGTCTGCTGTTGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENVRRGA*SAVAGT
Trigger: TGTTCCTGCAACAGCAGACCAAGCACCGCGGCGGAC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAACCCACTATGGTACTTaGCCAGCAGGTGGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQTHYGT*PAGGGY
Trigger: GTAACCCCCACCTGCTGGTCAAGTACCATAGTGGGT...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGGTGGCGGAGCCGTGTaGTCATGCCTGCTGAATTGT +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENGGGAV*SCLLNC
Trigger: ACAATTCAGCAGGCATGATCACACGGCTCCGCCACC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACGGTGTATGAATTGGTaGCTCTCCAAGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGARCMNW*LSKKAM
Trigger: CATGGCCTTCTTGGAGAGTCACCAATTCATACACCG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAGCCAGCAGCTGTACATaGTCTGGTAGATGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQASSCT*SGRWCP
Trigger: CGGACACCATCTACCAGATCATGTACAGCTGCTGGC...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCTGCTTTACAGCTCTaGTGGCAACACAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAAALQL*WQHRNF
Trigger: GAAGTTCCTGTGTTGCCAGCAGAGCTGTAAAGCAGC...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGTAGATGGTGTCCGATaGCAGGTGGGGCCGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENVDGVR*QVGPVK
Trigger: CTTTACCGGCCCCACCTGGCATCGGACACCATCTAC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGTAGATGGTGTCCGATaGCAGGTGGGGCCGGTAAAG +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISVDGVR*QVGPVK
Trigger: CTTTACCGGCCCCACCTGGCATCGGACACCATCTAC...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATCCAGAGGGTACATCCTaGGGCTGCTTTACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNPEGTS*GCFTAL
Trigger: CAGAGCTGTAAAGCAGCCCCAGGATGTACCCTCTGG...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAACCAGAGGGTACATCCTaGGGCTGCTTTACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQPEGTS*GCFTAL
Trigger: CAGAGCTGTAAAGCAGCCCCAGGATGTACCCTCTGG...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATTTCCACTTGCCCAGCTaGACCACTCCAAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNFHLPS*TTPNWP
Trigger: TGGCCAGTTTGGAGTGGTCCAGCTGGGCAAGTGGAA...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATTCCACTTGCCCAGCTaGACCACTCCAAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQFHLPS*TTPNWP
Trigger: TGGCCAGTTTGGAGTGGTCCAGCTGGGCAAGTGGAA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATGTGGGACGCTTTTCTaGAAGCTCGTGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQCGTLF*KLVPAA
Trigger: AGCTGCTGGCACGAGCTTCCAGAAAAGCGTCCCACA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATACCCACTATGGTACTTaGCCAGCAGGTGGGGGTTAC +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENTHYGT*PAGGGY
Trigger: GTAACCCCCACCTGCTGGTCAAGTACCATAGTGGGT...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGCCAGCAGCTGTACATaGTCTGGTAGATGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENASSCT*SGRWCP
Trigger: CGGACACCATCTACCAGATCATGTACAGCTGCTGGC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGCCAGCAGCTGTACATaGTCTGGTAGATGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISASSCT*SGRWCP
Trigger: CGGACACCATCTACCAGATCATGTACAGCTGCTGGC...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGAAGACAGGAGTTGCTaGAATGTGGGACGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAEDRSC*NVGRFS
Trigger: AGAAAAGCGTCCCACATTTCAGCAACTCCTGTCTTC...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACTCTCTACAGGCGTCTaGTCCTCGAGATTTACTTTC +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGALSTGV*SSRFTF
Trigger: GAAAGTAAATCTCGAGGAGCAGACGCCTGTAGAGAG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGTACATCCTGGGGCTaGTTTACAGCTCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISGTSWG*FTALLA
Trigger: TGCCAGCAGAGCTGTAAAGCAGCCCCAGGATGTACC...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAACAGCAACATCATACTaGCCCTTCCACTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQTATSY*PFHLPS
Trigger: GCTGGGCAAGTGGAAGGGGCAGTATGATGTTGCTGT...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAGCTTTACAGCTCTGCTaGCAACACAGGAACTTCCCG +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQALQLC*QHRNFP
Trigger: CGGGAAGTTCCTGTGTTGCCAGCAGAGCTGTAAAGC...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACTCTGTCTGGGAAGGTaGGAACTCTGTGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGALCLGR*ELCVSL
Trigger: AAGAGAAACACAGAGTTCCCACCTTCCCAGACAGAG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATTTGTTGACACAGGGTaGCGGAGCCGTGTGATCATG +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQFVDTG*RSRVIM
Trigger: CATGATCACACGGCTCCGCCACCCTGTGTCAACAAA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATTTTGTTGACACAGGGTaGCGGAGCCGTGTGATCATG +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNFVDTG*RSRVIM
Trigger: CATGATCACACGGCTCCGCCACCCTGTGTCAACAAA...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATAGTCGGGGACCTTGTTaGCCTTTGTTGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNSRGPC*PLLTQG
Trigger: ACCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACT...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTTCCACTTGCCCAGCTaGACCACTCCAAACTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENFHLPS*TTPNWP
Trigger: TGGCCAGTTTGGAGTGGTCCAGCTGGGCAAGTGGAA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTGTGGGACGCTTTTCTaGAAGCTCGTGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENCGTLF*KLVPAA
Trigger: AGCTGCTGGCACGAGCTTCCAGAAAAGCGTCCCACA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCATGTGGGACGCTTTTCTaGAAGCTCGTGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISCGTLF*KLVPAA
Trigger: AGCTGCTGGCACGAGCTTCCAGAAAAGCGTCCCACA...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACCCGAAGTGGTTCAATaGAAGACAGGAGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAPEVVQ*KTGVAE
Trigger: TTCAGCAACTCCTGTCTTCCATTGAACCACTTCGGG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAATGGTGCATCCATTTTaGGAACAGGAACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQMVHPF*EQELPE
Trigger: CTCGGGCAGTTCCTGTTCTCAAAATGGATGCACCAT...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGAATATACTGCATGTTaGAGTTTGGCTGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAEYTAC*SLAGSH
Trigger: ATGGCTCCCAGCCAAACTTCAACATGCAGTATATTC...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAATAGTCTGGGCCTCCTaGAAGAATTCATCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAIVWAS*KNSSSD
Trigger: GTCAGAAGATGAATTCTTTCAGGAGGCCCAGACTAT...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATCGGTGTATGAATTGGTaGCTCTCCAAGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNRCMNW*LSKKAM
Trigger: CATGGCCTTCTTGGAGAGTCACCAATTCATACACCG...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAACGGTGTATGAATTGGTaGCTCTCCAAGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQRCMNW*LSKKAM
Trigger: CATGGCCTTCTTGGAGAGTCACCAATTCATACACCG...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAACCAAGTCCCGGTGTATaGATTGGTGACTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQPSPGV*IGDSPR
Trigger: TCTTGGAGAGTCACCAATTCATACACCGGGACTTGG...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATCTGGAGCTGACCACTTaGCTGGAAACTTTGTTCCGA +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNLELTT*LETLFR
Trigger: TCGGAACAAAGTTTCCAGTCAAGTGGTCAGCTCCAG...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCATCATCTTTCATCCACTaGTTAGCGGCAGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGASSFIH*LAAASF
Trigger: GAAAGATGCTGCCGCTAATCAGTGGATGAAAGATGA...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357607.6
CDS-3UTR GCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAATGCAGATTAGCATATaGTTCCCAGAGGGTACATCC +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAMQISI*FPEGTS
Trigger: GGATGTACCCTCTGGGAAGCATATGCTAATCTGCAT...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAACAGCAACATCATACTaGCCCTTCCACTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISTATSY*PFHLPS
Trigger: GCTGGGCAAGTGGAAGGGGCAGTATGATGTTGCTGT...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATACAGCAACATCATACTaGCCCTTCCACTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENTATSY*PFHLPS
Trigger: GCTGGGCAAGTGGAAGGGGCAGTATGATGTTGCTGT...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATCTCCAAGAAGGCCATaGCTTCACAGACATCGTAGC +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQSPRRP*LHRHRS
Trigger: GCTACGATGTCTGTGAAGGCATGGCCTTCTTGGAGA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATACTTGACCAGCAGGTaGGGGTTACCCCTTATCTCT +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQYLTSR*GLPLIS
Trigger: AGAGATAAGGGGTAACCCCCACCTGCTGGTCAAGTA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAACGAAGAACCCACTATaGTACTTGACCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQTKNPL*YLTSRW
Trigger: CCACCTGCTGGTCAAGTACCATAGTGGGTTCTTCGT...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGCTTTACAGCTCTGCTaGCAACACAGGAACTTCCCG +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISALQLC*QHRNFP
Trigger: CGGGAAGTTCCTGTGTTGCCAGCAGAGCTGTAAAGC...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATCTTCAGCACTCTGTCTaGGAAGGTGGGAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENLQHSV*EGGNSV
Trigger: CACAGAGTTCCCACCTTCCCAGACAGAGTGCTGAAG...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTTTGTTGACACAGGGTaGCGGAGCCGTGTGATCATG +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENFVDTG*RSRVIM
Trigger: CATGATCACACGGCTCCGCCACCCTGTGTCAACAAA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAACCTTCAGAACCACCTaGGAGTTGTCATACAAGTCA +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGATFRTT*ELSYKS
Trigger: TGACTTGTATGACAACTCCCAGGTGGTTCTGAAGGT...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGTCTTTTTCCCGAAGTaGTTCAATGGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAVFFPK*FNGRQE
Trigger: CTCCTGTCTTCCATTGAACCACTTCGGGAAAAAGAC...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATATGGTGCATCCATTTTaGGAACAGGAACTGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENMVHPF*EQELPE
Trigger: CTCGGGCAGTTCCTGTTCTCAAAATGGATGCACCAT...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCACCAAGTCCCGGTGTATaGATTGGTGACTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISPSPGV*IGDSPR
Trigger: TCTTGGAGAGTCACCAATTCATACACCGGGACTTGG...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAAAACTTTGTTCCGACTaGACTGACATACTGGTCATC +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAKLCSD*TDILVI
Trigger: GATGACCAGTATGTCAGTTCAGTCGGAACAAAGTTT...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATCTGGAGCTGACCACTTaGCTGGAAACTTTGTTCCGA +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENLELTT*LETLFR
Trigger: TCGGAACAAAGTTTCCAGTCAAGTGGTCAGCTCCAG...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATAAACACCTCTGGAGCTaGCCACTTGACTGGAAACTT +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNKHLWS*PLDWKL
Trigger: AAGTTTCCAGTCAAGTGGTCAGCTCCAGAGGTGTTT...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAAAATGCCCATACGTCTaGCTTGCTGCTGTATTTGAA +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAKCPYV*LAAVFE
Trigger: TTCAAATACAGCAGCAAGTCAGACGTATGGGCATTT...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAGAAGACAGGAGTTGCTaGAATGTGGGACGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQEDRSC*NVGRFS
Trigger: AGAAAAGCGTCCCACATTTCAGCAACTCCTGTCTTC...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGCTGCTTTACAGCTCTaGTGGCAACACAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENAALQL*WQHRNF
Trigger: GAAGTTCCTGTGTTGCCAGCAGAGCTGTAAAGCAGC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATTTGAGAACAGGAACTaGCCGAGGTATCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQFENRN*PRYLQH
Trigger: GTGCTGAAGATACCTCGGGCAGTTCCTGTTCTCAAA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATTTTGAGAACAGGAACTaGCCGAGGTATCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNFENRN*PRYLQH
Trigger: GTGCTGAAGATACCTCGGGCAGTTCCTGTTCTCAAA...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCATCCCTTGGAATATACTaGATGTTGAAGTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGASLGIY*MLKFGW
Trigger: CCAGCCAAACTTCAACATGCAGTATATTCCAAGGGA...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCATTCAGTTTTCTTACTTaGCACCAGTCAGGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAFSFLT*HQSGKS
Trigger: AGACTTCCCTGACTGGTGGCAAGTAAGAAAACTGAA...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCATCTCCAAGAAGGCCATaGCTTCACAGACATCGTAGC +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISSPRRP*LHRHRS
Trigger: GCTACGATGTCTGTGAAGGCATGGCCTTCTTGGAGA...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTCTCCAAGAAGGCCATaGCTTCACAGACATCGTAGC +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENSPRRP*LHRHRS
Trigger: GCTACGATGTCTGTGAAGGCATGGCCTTCTTGGAGA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATTTTCTGGAAGCTCGTaGCAGCAGCTGTACATGATC +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQFSGSS*QQLYMI
Trigger: GATCATGTACAGCTGCTGGCACGAGCTTCCAGAAAA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCCGAAGTATACATGTaGGTCCTTAACTTTGACTCT +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAAEVYM*VLNFDS
Trigger: AGAGTCAAAGTTAAGGACCCACATGTATACTTCGGC...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342014.6
CDS-3UTR CCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAACGAAGAACCCACTATaGTACTTGACCAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISTKNPL*YLTSRW
Trigger: CCACCTGCTGGTCAAGTACCATAGTGGGTTCTTCGT...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACTGCATGTTGAAGTTTaGCTGGGAGCCATAGATTTT +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGALHVEV*LGAIDF
Trigger: AAAATCTATGGCTCCCAGCCAAACTTCAACATGCAG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAACCCGAAGTGGTTCAATaGAAGACAGGAGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQPEVVQ*KTGVAE
Trigger: TTCAGCAACTCCTGTCTTCCATTGAACCACTTCGGG...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATGTTTCACATTTTCCTaGCTGCCGGGTCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQCFTFS*LPGQKW
Trigger: CCATTTCTGACCCGGCAGCCAGGAAAATGTGAAACA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS-3UTR TCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATGAATATACTGCATGTTaGAGTTTGGCTGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNEYTAC*SLAGSH
Trigger: ATGGCTCCCAGCCAAACTTCAACATGCAGTATATTC...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATAAACACCTCTGGAGCTaGCCACTTGACTGGAAACTT +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENKHLWS*PLDWKL
Trigger: AAGTTTCCAGTCAAGTGGTCAGCTCCAGAGGTGTTT...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGAAGACAGGAGTTGCTaGAATGTGGGACGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENEDRSC*NVGRFS
Trigger: AGAAAAGCGTCCCACATTTCAGCAACTCCTGTCTTC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACTACTTTCCTTAAAATaGATGAAAATGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGALLSLK*MKMLAS
Trigger: GCTGGCCAGCATTTTCATTCATTTTAAGGAAAGTAG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATCTCTCTACAGGCGTCTaGTCCTCGAGATTTACTTTC +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENLSTGV*SSRFTF
Trigger: GAAAGTAAATCTCGAGGAGCAGACGCCTGTAGAGAG...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAATGCAGATTAGCATATaGTTCCCAGAGGGTACATCC +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQMQISI*FPEGTS
Trigger: GGATGTACCCTCTGGGAAGCATATGCTAATCTGCAT...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCATTTGAGAACAGGAACTaGCCGAGGTATCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISFENRN*PRYLQH
Trigger: GTGCTGAAGATACCTCGGGCAGTTCCTGTTCTCAAA...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACAACATCTTCACTGCTaGTGCTACTTTTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAQHLHC*CYFSVF
Trigger: GAAAACTGAAAAGTAGCAGCAGCAGTGAAGATGTTG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCATTGCAACATCTTCACTaGTGCTGCTACTTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGALQHLH*CCYFSV
Trigger: AACTGAAAAGTAGCAGCAGCAGTGAAGATGTTGCAA...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTTTTCTGGAAGCTCGTaGCAGCAGCTGTACATGATC +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENFSGSS*QQLYMI
Trigger: GATCATGTACAGCTGCTGGCACGAGCTTCCAGAAAA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCACTCTGTCTGGGAAGGTaGGAACTCTGTGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISLCLGR*ELCVSL
Trigger: AAGAGAAACACAGAGTTCCCACCTTCCCAGACAGAG...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATCTCTGTCTGGGAAGGTaGGAACTCTGTGTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENLCLGR*ELCVSL
Trigger: AAGAGAAACACAGAGTTCCCACCTTCCCAGACAGAG...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACACATTTCTAAGAGCTaGGAAGGTTCAAGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAHISKS*EGSSPF
Trigger: AAAAGGACTTGAACCTTCCCAGCTCTTAGAAATGTG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCACCCGAAGTGGTTCAATaGAAGACAGGAGTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISPEVVQ*KTGVAE
Trigger: TTCAGCAACTCCTGTCTTCCATTGAACCACTTCGGG...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAGTCTTTTTCCCGAAGTaGTTCAATGGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQVFFPK*FNGRQE
Trigger: CTCCTGTCTTCCATTGAACCACTTCGGGAAAAAGAC...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGAATATACTGCATGTTaGAGTTTGGCTGGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISEYTAC*SLAGSH
Trigger: ATGGCTCCCAGCCAAACTTCAACATGCAGTATATTC...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCATATGGGGTATTCCTTTaGACACACTCCATAGAATTT +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGAYGVFL*THSIEF
Trigger: AAATTCTATGGAGTGTGTTCAAAGGAATACCCCATA...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATTGTTCCGACTGAACTaGCATACTGGTCATCAAGAA +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQLFRLN*HTGHQE
Trigger: TTCTTGATGACCAGTATGTCAGTTCAGTCGGAACAA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAAACTTTGTTCCGACTaGACTGACATACTGGTCATC +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQKLCSD*TDILVI
Trigger: GATGACCAGTATGTCAGTTCAGTCGGAACAAAGTTT...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATAAACTTTGTTCCGACTaGACTGACATACTGGTCATC +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNKLCSD*TDILVI
Trigger: GATGACCAGTATGTCAGTTCAGTCGGAACAAAGTTT...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAAATGCCCATACGTCTaGCTTGCTGCTGTATTTGAA +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQKCPYV*LAAVFE
Trigger: TTCAAATACAGCAGCAAGTCAGACGTATGGGCATTT...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCATCAGCAAGCAGCCATTaGTTATATATTCAGTCACTA +
Preference number: 4 (lower is better)
Translates to: CSLKMCFCYRLESVISGASASSH*LYIQSL
Trigger: TAGTGACTGAATATATAAGCAATGGCTGCTTGCTGA...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATTAACCAGCTTGGGATaGCTGAGTTTCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQLTSLG*LSFIIV
Trigger: GACTATGATGAAACTCAGCCATCCCAAGCTGGTTAA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAACCTTCAGAACCACCTaGGAGTTGTCATACAAGTCA +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISTFRTT*ELSYKS
Trigger: TGACTTGTATGACAACTCCCAGGTGGTTCTGAAGGT...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGTCTTTTTCCCGAAGTaGTTCAATGGAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISVFFPK*FNGRQE
Trigger: CTCCTGTCTTCCATTGAACCACTTCGGGAAAAAGAC...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAGCCATAGTTTTTCTTTaGTTCGTTGTCATATTGGGC +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQAIVFL*FVVILG
Trigger: GCCCAATATGACAACGAATCAAAGAAAAACTATGGC...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATGCCATAGTTTTTCTTTaGTTCGTTGTCATATTGGGC +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNAIVFL*FVVILG
Trigger: GCCCAATATGACAACGAATCAAAGAAAAACTATGGC...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCATTGTTCCGACTGAACTaGCATACTGGTCATCAAGAA +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISLFRLN*HTGHQE
Trigger: TTCTTGATGACCAGTATGTCAGTTCAGTCGGAACAA...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAAAATGCCCATACGTCTaGCTTGCTGCTGTATTTGAA +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISKCPYV*LAAVFE
Trigger: TTCAAATACAGCAGCAAGTCAGACGTATGGGCATTT...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATCATTGACTGCAGTATaGAGATTAGCATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQSLTAV*RLAYAS
Trigger: GGAAGCATATGCTAATCTGCATACTGCAGTCAATGA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATTCATTGACTGCAGTATaGAGATTAGCATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNSLTAV*RLAYAS
Trigger: GGAAGCATATGCTAATCTGCATACTGCAGTCAATGA...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCATCCCTTGGAATATACTaGATGTTGAAGTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISSLGIY*MLKFGW
Trigger: CCAGCCAAACTTCAACATGCAGTATATTCCAAGGGA...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTTCAGTTTTCTTACTTaGCACCAGTCAGGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENFSFLT*HQSGKS
Trigger: AGACTTCCCTGACTGGTGGCAAGTAAGAAAACTGAA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATTTGCAACATCTTCACTaGTGCTGCTACTTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNLQHLH*CCYFSV
Trigger: AACTGAAAAGTAGCAGCAGCAGTGAAGATGTTGCAA...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAACTGAAAATGTGCTTCTaGTATAGGCTGGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQLKMCF*YRLESV
Trigger: AACACTTTCCAGCCTATAGCAGAAGCACATTTTCAG...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAATAGACAATCTGAAATaGGTACTGTCTCTCTACAGG +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQIDNLK*VLSLYR
Trigger: CCTGTAGAGAGACAGTACCCATTTCAGATTGTCTAT...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATATAGACAATCTGAAATaGGTACTGTCTCTCTACAGG +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNIDNLK*VLSLYR
Trigger: CCTGTAGAGAGACAGTACCCATTTCAGATTGTCTAT...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATCTGCATGTTGAAGTTTaGCTGGGAGCCATAGATTTT +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENLHVEV*LGAIDF
Trigger: AAAATCTATGGCTCCCAGCCAAACTTCAACATGCAG...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATAGGGAAGTCTTCCCTTaGAATATACTGCATGTTGAA +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNREVFP*NILHVE
Trigger: TTCAACATGCAGTATATTCCAAGGGAAGACTTCCCT...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGTTCAGATTGTGATCTaGAGATGTTACCAGCAAACC +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENVQIVI*RCYQQT
Trigger: GGTTTGCTGGTAACATCTCCAGATCACAATCTGAAC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGTTCAGATTGTGATCTaGAGATGTTACCAGCAAACC +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISVQIVI*RCYQQT
Trigger: GGTTTGCTGGTAACATCTCCAGATCACAATCTGAAC...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAGTGTACATTCCCACTTaGCTCGAATTTCTAACCATA +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQVYIPT*LEFLTI
Trigger: TATGGTTAGAAATTCGAGCCAAGTGGGAATGTACAC...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATGTGTACATTCCCACTTaGCTCGAATTTCTAACCATA +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNVYIPT*LEFLTI
Trigger: TATGGTTAGAAATTCGAGCCAAGTGGGAATGTACAC...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTTAACCAGCTTGGGATaGCTGAGTTTCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENLTSLG*LSFIIV
Trigger: GACTATGATGAAACTCAGCCATCCCAAGCTGGTTAA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCATTAACCAGCTTGGGATaGCTGAGTTTCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISLTSLG*LSFIIV
Trigger: GACTATGATGAAACTCAGCCATCCCAAGCTGGTTAA...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATCACATTTCTAAGAGCTaGGAAGGTTCAAGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNHISKS*EGSSPF
Trigger: AAAAGGACTTGAACCTTCCCAGCTCTTAGAAATGTG...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCATGTGATCATGCCTGCTaGATTGTGTTGATGATAATG +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISCDHAC*IVLMIM
Trigger: CATTATCATCAACACAATTCAGCAGGCATGATCACA...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTGTGATCATGCCTGCTaGATTGTGTTGATGATAATG +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENCDHAC*IVLMIM
Trigger: CATTATCATCAACACAATTCAGCAGGCATGATCACA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATCTACTTTCCTTAAAATaGATGAAAATGCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENLLSLK*MKMLAS
Trigger: GCTGGCCAGCATTTTCATTCATTTTAAGGAAAGTAG...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATCTCTATATTGCAGTCTaGAAATGTGCTTCTGCTATA +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNLYIAV*KCASAI
Trigger: TATAGCAGAAGCACATTTTCAGACTGCAATATAGAG...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCATCATTGACTGCAGTATaGAGATTAGCATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISSLTAV*RLAYAS
Trigger: GGAAGCATATGCTAATCTGCATACTGCAGTCAATGA...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCACAACATCTTCACTGCTaGTGCTACTTTTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISQHLHC*CYFSVF
Trigger: GAAAACTGAAAAGTAGCAGCAGCAGTGAAGATGTTG...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTTGCAACATCTTCACTaGTGCTGCTACTTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENLQHLH*CCYFSV
Trigger: AACTGAAAAGTAGCAGCAGCAGTGAAGATGTTGCAA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCACTGAAAATGTGCTTCTaGTATAGGCTGGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISLKMCF*YRLESV
Trigger: AACACTTTCCAGCCTATAGCAGAAGCACATTTTCAG...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATCTGAAAATGTGCTTCTaGTATAGGCTGGAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENLKMCF*YRLESV
Trigger: AACACTTTCCAGCCTATAGCAGAAGCACATTTTCAG...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATACACAGTCTCTATATTaGAGTCTGAAAATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNTQSLY*SLKMCF
Trigger: GAAGCACATTTTCAGACTGCAATATAGAGACTGTGT...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAACACAGTCTCTATATTaGAGTCTGAAAATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQTQSLY*SLKMCF
Trigger: GAAGCACATTTTCAGACTGCAATATAGAGACTGTGT...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATATAGACAATCTGAAATaGGTACTGTCTCTCTACAGG +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENIDNLK*VLSLYR
Trigger: CCTGTAGAGAGACAGTACCCATTTCAGATTGTCTAT...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATAGGGAAGTCTTCCCTTaGAATATACTGCATGTTGAA +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENREVFP*NILHVE
Trigger: TTCAACATGCAGTATATTCCAAGGGAAGACTTCCCT...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAAGGGAAGTCTTCCCTTaGAATATACTGCATGTTGAA +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISREVFP*NILHVE
Trigger: TTCAACATGCAGTATATTCCAAGGGAAGACTTCCCT...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGTGTACATTCCCACTTaGCTCGAATTTCTAACCATA +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENVYIPT*LEFLTI
Trigger: TATGGTTAGAAATTCGAGCCAAGTGGGAATGTACAC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATCAGTCACTATGTATATaGGGTATTCCTTTGAACACA +
Preference number: 4 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNQSLCI*GIPLNT
Trigger: TGTGTTCAAAGGAATACCCCATATACATAGTGACTG...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCACACATTTCTAAGAGCTaGGAAGGTTCAAGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISHISKS*EGSSPF
Trigger: AAAAGGACTTGAACCTTCCCAGCTCTTAGAAATGTG...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTATGGGGTATTCCTTTaGACACACTCCATAGAATTT +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENYGVFL*THSIEF
Trigger: AAATTCTATGGAGTGTGTTCAAAGGAATACCCCATA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCATATGGGGTATTCCTTTaGACACACTCCATAGAATTT +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISYGVFL*THSIEF
Trigger: AAATTCTATGGAGTGTGTTCAAAGGAATACCCCATA...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR TCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCACTCTATATTGCAGTCTaGAAATGTGCTTCTGCTATA +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISLYIAV*KCASAI
Trigger: TATAGCAGAAGCACATTTTCAGACTGCAATATAGAG...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATTTCTCTTCATTGACTaGAGTATGCAGATTAGCATA +
Preference number: 4 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQFLFID*SMQISI
Trigger: TATGCTAATCTGCATACTGCAGTCAATGAAGAGAAA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCATTTCTTTTTGGTTACTaGTTGCAACATCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISFLFGY*LQHLHC
Trigger: GCAGTGAAGATGTTGCAAGCAGTAACCAAAAAGAAA...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTTTCTTTTTGGTTACTaGTTGCAACATCTTCACTGC +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENFLFGY*LQHLHC
Trigger: GCAGTGAAGATGTTGCAAGCAGTAACCAAAAAGAAA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTCAGCAAGCAGCCATTaGTTATATATTCAGTCACTA +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENSASSH*LYIQSL
Trigger: TAGTGACTGAATATATAAGCAATGGCTGCTTGCTGA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAACACAGTCTCTATATTaGAGTCTGAAAATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISTQSLY*SLKMCF
Trigger: GAAGCACATTTTCAGACTGCAATATAGAGACTGTGT...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCACAGTCACTATGTATATaGGGTATTCCTTTGAACACA +
Preference number: 4 (lower is better)
Translates to: LYCSLKMCFCYRLESVISQSLCI*GIPLNT
Trigger: TGTGTTCAAAGGAATACCCCATATACATAGTGACTG...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATCAGTCACTATGTATATaGGGTATTCCTTTGAACACA +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENQSLCI*GIPLNT
Trigger: TGTGTTCAAAGGAATACCCCATATACATAGTGACTG...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR GCA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTTTCTCTTCATTGACTaGAGTATGCAGATTAGCATA +
Preference number: 4 (lower is better)
Translates to: SSAQSLHMNTVSILQSENFLFID*SMQISI
Trigger: TATGCTAATCTGCATACTGCAGTCAATGAAGAGAAA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS CCA 90 bp TCCGTCTCAGCTTGTTCCGTGCTTGCCTGGGTCCGCCGCGGTGCTTaGTCTGCTGTTGCAGGAACACGGCCCCGGCTGTCCTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: SVSACSVLAWVRRGA*SAVAGTRPRLSCFQ
Trigger: CTGGAAACAGGACAGCCGGGGCCGTGTTCCTGCAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACAAGCTGAGACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS GCA 90 bp ATCATCCGTCTCAGCTTGTTCCGTGCTTGCCTGGGTCCGCCGCGGTaGTTGGTCTGCTGTTGCAGGAACACGGCCCCGGCTGTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: IIRLSLFRACLGPPR*LVCCCRNTAPAVLF
Trigger: AAACAGGACAGCCGGGGCCGTGTTCCTGCAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACAAGCTGAGACGGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS GCA 90 bp TTGTTCCGTGCTTGCCTGGGTCCGCCGCGGTGCTTGGTCTGCTGTTaGAGGAACACGGCCCCGGCTGTCCTGTTTCCAGAAGCAAATTGT +
Preference number: 5 (lower is better)
Translates to: LFRACLGPPRCLVCC*RNTAPAVLFPEANC
Trigger: ACAATTTGCTTCTGGAAACAGGACAGCCGGGGCCGTGTTCCTGCAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS TCA 90 bp TCCATTTCCCAGGGACACAGAGTCGGGGACCTTGTTGGCCTTTGTTaGCACAGGGTGGCGGAGCCGTGTGATCATGCTTCACAGCCTTAC +
Preference number: 5 (lower is better)
Translates to: SISQGHRVGDLVGLC*HRVAEPCDHASQPY
Trigger: GTAAGGCTGTGAAGCATGATCACACGGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACTCTGTGTCCCTGGGAAATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489983.1
CDS CCA 90 bp TTTGTATCCATATTATCATCCGTCTCAGCTTGTTCCGTGCTTGCCTaGGTCCGCCGCGGTGCTTGGTCTGCTGTTGCAGGAACACGGCCC +
Preference number: 5 (lower is better)
Translates to: FVSILSSVSACSVLA*VRRGAWSAVAGTRP
Trigger: GGGCCGTGTTCCTGCAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACAAGCTGAGACGGATGATAATATGGATACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS GCA 90 bp GCATATGCTTCCCAGAGGGTACATCCTGGGGCTGCTTTACAGCTCTaGTGGCAACACAGGAACTTCCCGTCCACGAAGAACCCACTATGG +
Preference number: 5 (lower is better)
Translates to: AYASQRVHPGAALQL*WQHRNFPSTKNPLW
Trigger: CCATAGTGGGTTCTTCGTGGACGGGAAGTTCCTGTGTTGCCAGCAGAGCTGTAAAGCAGCCCCAGGATGTACCCTCTGGGAAGCATATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000463891.1
CDS CCA 90 bp TATGCTTCCCAGAGGGTACATCCTGGGGCTGCTTTACAGCTCTGCTaGCAACACAGGAACTTCCCGTCCACGAAGAACCCACTATGGTAC +
Preference number: 5 (lower is better)
Translates to: YASQRVHPGAALQLC*QHRNFPSTKNPLWY
Trigger: GTACCATAGTGGGTTCTTCGTGGACGGGAAGTTCCTGTGTTGCCAGCAGAGCTGTAAAGCAGCCCCAGGATGTACCCTCTGGGAAGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000463891.1
CDS GCA 90 bp AGTATGCAGATTAGCATATGCTTCCCAGAGGGTACATCCTGGGGCTaGTTTACAGCTCTGCTGGCAACACAGGAACTTCCCGTCCACGAA +
Preference number: 5 (lower is better)
Translates to: SMQISICFPEGTSWG*FTALLATQELPVHE
Trigger: TTCGTGGACGGGAAGTTCCTGTGTTGCCAGCAGAGCTGTAAAGCAGCCCCAGGATGTACCCTCTGGGAAGCATATGCTAATCTGCATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000463891.1
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATCAGCTTGTTCCGTGCTaGCCTGGGTCCGCCGCGGTG +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNQLVPC*PGSAAV
Trigger: CACCGCGGCGGACCCAGGCAAGCACGGAACAAGCTG...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS TCA 90 bp TGCTTGTCTTTTTCCCGAAGTGGTTCAATGGAAGACAGGAGTTGCTaGAATGTGGGACGCTTTTCTGGAAGCTCGTGCCAGCAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: CLSFSRSGSMEDRSC*NVGRFSGSSCQQLY
Trigger: GTACAGCTGCTGGCACGAGCTTCCAGAAAAGCGTCCCACATTTCAGCAACTCCTGTCTTCCATTGAACCACTTCGGGAAAAAGACAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACCTTGTTGGCCTTTGTaGACACAGGGTGGCGGAGCC +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGAPCWPL*TQGGGA
Trigger: GGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAGG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAGTGCTTGGTCTGCTGTaGCAGGAACACGGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQVLGLL*QEHGPG
Trigger: GCCGGGGCCGTGTTCCTGCAACAGCAGACCAAGCAC...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCGCTAGACTGGTACTaGAAGATGGTGGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGAALDWY*KMVAGS
Trigger: GCTCCCAGCCACCATCTTCAAGTACCAGTCTAGCGC...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGGTCCGCCGCGGTGCTaGGTCTGCTGTTGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENGPPRC*VCCCRN
Trigger: GTTCCTGCAACAGCAGACCAAGCACCGCGGCGGACC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATCCTTGTTGGCCTTTGTaGACACAGGGTGGCGGAGCC +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNPCWPL*TQGGGA
Trigger: GGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAGG...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAATCATCCGTCTCAGCTaGTTCCGTGCTTGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGAIIRLS*FRACLG
Trigger: ACCCAGGCAAGCACGGAACAAGCTGAGACGGATGAT...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAAACCCACTATGGTACTaGACCAGCAGGTGGGGGTTA +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGANPLWY*TSRWGL
Trigger: TAACCCCCACCTGCTGGTCAAGTACCATAGTGGGTT...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATGCGCTAGACTGGTACTaGAAGATGGTGGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNALDWY*KMVAGS
Trigger: GCTCCCAGCCACCATCTTCAAGTACCAGTCTAGCGC...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATGGACCTTGTTGGCCTTaGTTGACACAGGGTGGCGGA +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNGPCWP*LTQGGG
Trigger: TCCGCCACCCTGTGTCAACAAAGGCCAACAAGGTCC...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATGAGTCGGGGACCTTGTaGGCCTTTGTTGACACAGGG +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNESGTL*AFVDTG
Trigger: CCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACTC...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAGAGTCGGGGACCTTGTaGGCCTTTGTTGACACAGGG +
Preference number: 5 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQESGTL*AFVDTG
Trigger: CCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACTC...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGTCCCGGTGTATGAATaGGTGACTCTCCAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGAVPVYE*VTLQEG
Trigger: GCCTTCTTGGAGAGTCACCAATTCATACACCGGGAC...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGATGGTGCATCCATTTaGAGAACAGGAACTGCCCGA +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGADGASI*RTGTAR
Trigger: TCGGGCAGTTCCTGTTCTCAAAATGGATGCACCATC...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGCGCTAGACTGGTACTaGAAGATGGTGGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: LYCSLKMCFCYRLESVISALDWY*KMVAGS
Trigger: GCTCCCAGCCACCATCTTCAAGTACCAGTCTAGCGC...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGACCTTGTTGGCCTTaGTTGACACAGGGTGGCGGA +
Preference number: 5 (lower is better)
Translates to: LYCSLKMCFCYRLESVISGPCWP*LTQGGG
Trigger: TCCGCCACCCTGTGTCAACAAAGGCCAACAAGGTCC...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGGACCTTGTTGGCCTTaGTTGACACAGGGTGGCGGA +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENGPCWP*LTQGGG
Trigger: TCCGCCACCCTGTGTCAACAAAGGCCAACAAGGTCC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGAGTCGGGGACCTTGTaGGCCTTTGTTGACACAGGG +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENESGTL*AFVDTG
Trigger: CCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACTC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAACCCACTATGGTACTaGACCAGCAGGTGGGGGTTA +
Preference number: 5 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQNPLWY*TSRWGL
Trigger: TAACCCCCACCTGCTGGTCAAGTACCATAGTGGGTT...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATAACCCACTATGGTACTaGACCAGCAGGTGGGGGTTA +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNNPLWY*TSRWGL
Trigger: TAACCCCCACCTGCTGGTCAAGTACCATAGTGGGTT...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATACAGAGTCGGGGACCTaGTTGGCCTTTGTTGACACA +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNTESGT*LAFVDT
Trigger: TGTGTCAACAAAGGCCAACAAGGTCCCCGACTCTGT...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATGTCCCGGTGTATGAATaGGTGACTCTCCAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNVPVYE*VTLQEG
Trigger: GCCTTCTTGGAGAGTCACCAATTCATACACCGGGAC...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACTTCTTCAGATGAACTaGACTCAGGGAATTCCCATG +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGALLQMN*TQGIPM
Trigger: CATGGGAATTCCCTGAGTCAAGTTCATCTGAAGAAG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATACAGAGTCGGGGACCTaGTTGGCCTTTGTTGACACA +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENTESGT*LAFVDT
Trigger: TGTGTCAACAAAGGCCAACAAGGTCCCCGACTCTGT...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAACAGAGTCGGGGACCTaGTTGGCCTTTGTTGACACA +
Preference number: 5 (lower is better)
Translates to: LYCSLKMCFCYRLESVISTESGT*LAFVDT
Trigger: TGTGTCAACAAAGGCCAACAAGGTCCCCGACTCTGT...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAATCTGGAGCTGACCACTaGACTGGAAACTTTGTTCCG +
Preference number: 5 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQSGADH*TGNFVP
Trigger: CGGAACAAAGTTTCCAGTCAAGTGGTCAGCTCCAGA...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS CCA 90 bp ACTTTTCAGTTTTCTTACTTGCCACCAGTCAGGGAAGTCTTCCCTTaGAATATACTGCATGTTGAAGTTTGGCTGGGAGCCATAGATTTT +
Preference number: 5 (lower is better)
Translates to: TFQFSYLPPVREVFP*NILHVEVWLGAIDF
Trigger: AAAATCTATGGCTCCCAGCCAAACTTCAACATGCAGTATATTCCAAGGGAAGACTTCCCTGACTGGTGGCAAGTAAGAAAACTGAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGATGGTGCATCCATTTaGAGAACAGGAACTGCCCGA +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENDGASI*RTGTAR
Trigger: TCGGGCAGTTCCTGTTCTCAAAATGGATGCACCATC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATGGGCTAGAGTGGTACTaGAAGATGGTGCATCCATTT +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNGLEWY*KMVHPF
Trigger: AAATGGATGCACCATCTTCAAGTACCACTCTAGCCC...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAGGAATATACTGCATGTaGAAGTTTGGCTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQGIYCM*KFGWEP
Trigger: TGGCTCCCAGCCAAACTTCAACATGCAGTATATTCC...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATGACATGGAGCCCTCCTaGATCATCTTAACAGCAACA +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNDMEPS*IILTAT
Trigger: TGTTGCTGTTAAGATGATCAAGGAGGGCTCCATGTC...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTCTGGAGCTGACCACTaGACTGGAAACTTTGTTCCG +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENSGADH*TGNFVP
Trigger: CGGAACAAAGTTTCCAGTCAAGTGGTCAGCTCCAGA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATAATGGAAGACAGGAGTaGCTGAAATGTGGGACGCTT +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNNGRQE*LKCGTL
Trigger: AAGCGTCCCACATTTCAGCAACTCCTGTCTTCCATT...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCATTCGGCTCTCTTCATTaGATGCATAGACATAGAGAA +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGAFGSLH*MHRHRE
Trigger: TTCTCTATGTCTATGCATCAAATGAAGAGAGCCGAA...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGGCTAGAGTGGTACTaGAAGATGGTGCATCCATTT +
Preference number: 5 (lower is better)
Translates to: LYCSLKMCFCYRLESVISGLEWY*KMVHPF
Trigger: AAATGGATGCACCATCTTCAAGTACCACTCTAGCCC...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAAGCCATAGATTTTCTTaGAGTTGCTGTCATATTGCG +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGASHRFS*SCCHIA
Trigger: CGCAATATGACAGCAACTCAAAGAAAATCTATGGCT...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAATATACTGCATGTaGAAGTTTGGCTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: LYCSLKMCFCYRLESVISGIYCM*KFGWEP
Trigger: TGGCTCCCAGCCAAACTTCAACATGCAGTATATTCC...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGGAATATACTGCATGTaGAAGTTTGGCTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENGIYCM*KFGWEP
Trigger: TGGCTCCCAGCCAAACTTCAACATGCAGTATATTCC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAATTCCCATGAAATCTTaGAGGTGGTGTGATTCACAT +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGAIPMKS*RWCDSH
Trigger: ATGTGAATCACACCACCTCAAAGATTTCATGGGAAT...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATGACATGGAGCCCTCCTaGATCATCTTAACAGCAACA +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENDMEPS*IILTAT
Trigger: TGTTGCTGTTAAGATGATCAAGGAGGGCTCCATGTC...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAAATGGAAGACAGGAGTaGCTGAAATGTGGGACGCTT +
Preference number: 5 (lower is better)
Translates to: LYCSLKMCFCYRLESVISNGRQE*LKCGTL
Trigger: AAGCGTCCCACATTTCAGCAACTCCTGTCTTCCATT...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCATTTCTTCTTCAATGCTaGTCTTTTTCCCGAAGTGGT +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGAFLLQC*SFSRSG
Trigger: ACCACTTCGGGAAAAAGACAAGCATTGAAGAAGAAA...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS CCA 90 bp ATCCATATTATCATCCTTAGACTCGCTAGAGCCGAAGTATACATGTaGGTCCTTAACTTTGACTCTCAAGCTCTAAGCAAAAAGTTACTG +
Preference number: 5 (lower is better)
Translates to: IHIIILRLARAEVYM*VLNFDSQALSKKLL
Trigger: CAGTAACTTTTTGCTTAGAGCTTGAGAGTCAAAGTTAAGGACCCACATGTATACTTCGGCTCTAGCGAGTCTAAGGATGATAATATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342014.6
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAAGCCATAGTTTTTCTTaGATTCGTTGTCATATTGGG +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGASHSFS*IRCHIG
Trigger: CCCAATATGACAACGAATCAAAGAAAAACTATGGCT...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTTTCAGTTTTCTTACTaGCCACCAGTCAGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENFQFSY*PPVREV
Trigger: GACTTCCCTGACTGGTGGCAAGTAAGAAAACTGAAA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCATTTCAGTTTTCTTACTaGCCACCAGTCAGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: LYCSLKMCFCYRLESVISFQFSY*PPVREV
Trigger: GACTTCCCTGACTGGTGGCAAGTAAGAAAACTGAAA...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATCTTCTTCAGATGAACTaGACTCAGGGAATTCCCATG +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENLLQMN*TQGIPM
Trigger: CATGGGAATTCCCTGAGTCAAGTTCATCTGAAGAAG...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATTGTGTACATTCCCACTaGGCTCGAATTTCTAACCAT +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNCVHSH*ARISNH
Trigger: ATGGTTAGAAATTCGAGCCAAGTGGGAATGTACACA...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCACATCAAGAACATACCTaGTCATTCCAAAGTCAGATA +
Preference number: 5 (lower is better)
Translates to: CSLKMCFCYRLESVISGAHQEHT*SFQSQI
Trigger: TATCTGACTTTGGAATGACAAGGTATGTTCTTGATG...TGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATTTCGGCTCTCTTCATTaGATGCATAGACATAGAGAA +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNFGSLH*MHRHRE
Trigger: TTCTCTATGTCTATGCATCAAATGAAGAGAGCCGAA...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAGCCATAGATTTTCTTaGAGTTGCTGTCATATTGCG +
Preference number: 5 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQSHRFS*SCCHIA
Trigger: CGCAATATGACAGCAACTCAAAGAAAATCTATGGCT...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATATTCCCATGAAATCTTaGAGGTGGTGTGATTCACAT +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNIPMKS*RWCDSH
Trigger: ATGTGAATCACACCACCTCAAAGATTTCATGGGAAT...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATTCTGCCAGGTATAATTaGTTCTCAGCATTTGTATGC +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNSARYN*FSAFVC
Trigger: GCATACAAATGCTGAGAACAAATTATACCTGGCAGA...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATTTCAGCAAGCAGCCATaGCTTATATATTCAGTCACT +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNFSKQP*LIYSVT
Trigger: AGTGACTGAATATATAAGCAATGGCTGCTTGCTGAA...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAGTTTCCAGAAGCAAATaGTTTCACATTTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: KCASAIGWKVLYQEQHKQVSRSK*FHIFLA
Trigger: AGCCAGGAAAATGTGAAACAATTTGCTTCTGGAAAC...TTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATAGCCATAGTTTTTCTTaGATTCGTTGTCATATTGGG +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNSHSFS*IRCHIG
Trigger: CCCAATATGACAACGAATCAAAGAAAAACTATGGCT...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp TGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCAGGAGCAGCATAAACAAAATATATGGGGTATTCCTTaGAACACACTCCATAGAATT +
Preference number: 5 (lower is better)
Translates to: CASAIGWKVLYQEQHKQNIWGIP*NTLHRI
Trigger: AATTCTATGGAGTGTGTTCAAAGGAATACCCCATAT...ATTTTGTTTATGCTGCTCCTGATATAACACTTTCCAGCCTATAGCAGAAGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTTCAGCAAGCAGCCATaGCTTATATATTCAGTCACT +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENFSKQP*LIYSVT
Trigger: AGTGACTGAATATATAAGCAATGGCTGCTTGCTGAA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATTTTCTTCTTCAATGCTaGTCTTTTTCCCGAAGTGGT +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENFLLQC*SFSRSG
Trigger: ACCACTTCGGGAAAAAGACAAGCATTGAAGAAGAAA...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATAGCCATAGTTTTTCTTaGATTCGTTGTCATATTGGG +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENSHSFS*IRCHIG
Trigger: CCCAATATGACAACGAATCAAAGAAAAACTATGGCT...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATATATGGGGTATTCCTTaGAACACACTCCATAGAATT +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENIWGIP*NTLHRI
Trigger: AATTCTATGGAGTGTGTTCAAAGGAATACCCCATAT...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp AGTTCTGCTCAGTCTTTACACATGAACACAGTCTCTATATTGCAGTCTGAAAATCATCAAGAACATACCTaGTCATTCCAAAGTCAGATA +
Preference number: 5 (lower is better)
Translates to: SSAQSLHMNTVSILQSENHQEHT*SFQSQI
Trigger: TATCTGACTTTGGAATGACAAGGTATGTTCTTGATG...ATTTTCAGACTGCAATATAGAGACTGTGTTCATGTGTAAAGACTGAGCAGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS-3UTR CAA 90 bp CTATATTGCAGTCTGAAAATGTGCTTCTGCTATAGGCTGGAAAGTGTTATATCACATCAAGAACATACCTaGTCATTCCAAAGTCAGATA +
Preference number: 5 (lower is better)
Translates to: LYCSLKMCFCYRLESVISHQEHT*SFQSQI
Trigger: TATCTGACTTTGGAATGACAAGGTATGTTCTTGATG...TGATATAACACTTTCCAGCCTATAGCAGAAGCACATTTTCAGACTGCAATATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS CCA 72 bp GCTTGTTCCGTGCTTGCCTGGGTCCGCCGCGGTGCTTaGTCTGCTGTTGCAGGAACACGGCCCCGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: ACSVLAWVRRGA*SAVAGTRPRLS
Trigger: GGACAGCCGGGGCCGTGTTCCTGCAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS GCA 72 bp CTCAGCTTGTTCCGTGCTTGCCTGGGTCCGCCGCGGTaGTTGGTCTGCTGTTGCAGGAACACGGCCCCGGCT +
Preference number: 6 (lower is better)
Translates to: LSLFRACLGPPR*LVCCCRNTAPA
Trigger: AGCCGGGGCCGTGTTCCTGCAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACAAGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS GCA 72 bp GCTTGCCTGGGTCCGCCGCGGTGCTTGGTCTGCTGTTaGAGGAACACGGCCCCGGCTGTCCTGTTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: ACLGPPRCLVCC*RNTAPAVLFPE
Trigger: TTCTGGAAACAGGACAGCCGGGGCCGTGTTCCTGCAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS CAA 72 bp TGCTTGCCTGGGTCCGCCGCGGTGCTTGGTCTGCTGTaGCAGGAACACGGCCCCGGCTGTCCTGTTTCCAGA +
Preference number: 6 (lower is better)
Translates to: CLPGSAAVLGLL*QEHGPGCPVSR
Trigger: TCTGGAAACAGGACAGCCGGGGCCGTGTTCCTGCAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS CAA 90 bp ATCCGTCTCAGCTTGTTCCGTGCTTGCCTGGGTCCGCCGCGGTGCTaGGTCTGCTGTTGCAGGAACACGGCCCCGGCTGTCCTGTTTCCA +
Preference number: 6 (lower is better)
Translates to: IRLSLFRACLGPPRC*VCCCRNTAPAVLFP
Trigger: TGGAAACAGGACAGCCGGGGCCGTGTTCCTGCAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACAAGCTGAGACGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS CAA 90 bp CTTGTTCCGTGCTTGCCTGGGTCCGCCGCGGTGCTTGGTCTGCTGTaGCAGGAACACGGCCCCGGCTGTCCTGTTTCCAGAAGCAAATTG +
Preference number: 6 (lower is better)
Translates to: LVPCLPGSAAVLGLL*QEHGPGCPVSRSKL
Trigger: CAATTTGCTTCTGGAAACAGGACAGCCGGGGCCGTGTTCCTGCAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS TCA 72 bp CAGGGACACAGAGTCGGGGACCTTGTTGGCCTTTGTTaGCACAGGGTGGCGGAGCCGTGTGATCATGCCTGC +
Preference number: 6 (lower is better)
Translates to: QGHRVGDLVGLC*HRVAEPCDHAC
Trigger: GCAGGCATGATCACACGGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACTCTGTGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS TCA 72 bp GACGCTTTTCTGGAAGCTCGTGCCAGCAGCTGTACATaGTCTGGTAGATGGTGTCCGATGCCAGGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: DAFLEARASSCT*SGRWCPMPGGA
Trigger: GGCCCCACCTGGCATCGGACACCATCTACCAGATCATGTACAGCTGCTGGCACGAGCTTCCAGAAAAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS TCA 72 bp CAGGGACACAGAGTCGGGGACCTTGTTGGCCTTTGTTaGCACAGGGTGGCGGAGCCGTGTGATCATGCTTCA +
Preference number: 6 (lower is better)
Translates to: QGHRVGDLVGLC*HRVAEPCDHAS
Trigger: TGAAGCATGATCACACGGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACTCTGTGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489983.1
CDS CAA 72 bp ATTCCATTTCCCAGGGACACAGAGTCGGGGACCTTGTaGGCCTTTGTTGACACAGGGTGGCGGAGCCGTGTG +
Preference number: 6 (lower is better)
Translates to: IPFPRDTESGTL*AFVDTGWRSRV
Trigger: CACACGGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACTCTGTGTCCCTGGGAAATGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000489983.1
CDS CAA 72 bp CAGATTCCATTTCCCAGGGACACAGAGTCGGGGACCTaGTTGGCCTTTGTTGACACAGGGTGGCGGAGCCGT +
Preference number: 6 (lower is better)
Translates to: QIPFPRDTESGT*LAFVDTGWRSR
Trigger: ACGGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACTCTGTGTCCCTGGGAAATGGAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000489983.1
CDS CAA 90 bp AGTTCCCAGATTCCATTTCCCAGGGACACAGAGTCGGGGACCTTGTaGGCCTTTGTTGACACAGGGTGGCGGAGCCGTGTGATCATGCCT +
Preference number: 6 (lower is better)
Translates to: SSQIPFPRDTESGTL*AFVDTGWRSRVIMP
Trigger: AGGCATGATCACACGGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACTCTGTGTCCCTGGGAAATGGAATCTGGGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS GCA 72 bp TCCCAGAGGGTACATCCTGGGGCTGCTTTACAGCTCTaGTGGCAACACAGGAACTTCCCGTCCACGAAGAAC +
Preference number: 6 (lower is better)
Translates to: SQRVHPGAALQL*WQHRNFPSTKN
Trigger: GTTCTTCGTGGACGGGAAGTTCCTGTGTTGCCAGCAGAGCTGTAAAGCAGCCCCAGGATGTACCCTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000463891.1
CDS GCA 72 bp ATCCATATTATCATCCGTCTCAGCTTGTTCCGTGCTTaGCTGGGTCCGCCGCGGTGCTTGGTCTGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: IHIIIRLSLFRA*LGPPRCLVCCC
Trigger: GCAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACAAGCTGAGACGGATGATAATATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS CCA 72 bp ATATTATCATCCGTCTCAGCTTGTTCCGTGCTTGCCTaGGTCCGCCGCGGTGCTTGGTCTGCTGTTGCAGGA +
Preference number: 6 (lower is better)
Translates to: ILSSVSACSVLA*VRRGAWSAVAG
Trigger: TCCTGCAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACAAGCTGAGACGGATGATAATAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS CAA 90 bp TTCAGTTCCCAGATTCCATTTCCCAGGGACACAGAGTCGGGGACCTaGTTGGCCTTTGTTGACACAGGGTGGCGGAGCCGTGTGATCATG +
Preference number: 6 (lower is better)
Translates to: FSSQIPFPRDTESGT*LAFVDTGWRSRVIM
Trigger: CATGATCACACGGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACTCTGTGTCCCTGGGAAATGGAATCTGGGAACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000489983.1
CDS CAA 90 bp AGTTCCCAGATTCCATTTCCCAGGGACACAGAGTCGGGGACCTTGTaGGCCTTTGTTGACACAGGGTGGCGGAGCCGTGTGATCATGCTT +
Preference number: 6 (lower is better)
Translates to: SSQIPFPRDTESGTL*AFVDTGWRSRVIML
Trigger: AAGCATGATCACACGGCTCCGCCACCCTGTGTCAACAAAGGCCAACAAGGTCCCCGACTCTGTGTCCCTGGGAAATGGAATCTGGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489983.1
CDS GCA 72 bp TTGTATCCATATTATCATCCGTCTCAGCTTGTTCCGTaGTTGCCTGGGTCCGCCGCGGTGCTTGGTCTGCTG +
Preference number: 6 (lower is better)
Translates to: LYPYYHPSQLVP*LPGSAAVLGLL
Trigger: CAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACAAGCTGAGACGGATGATAATATGGATACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS CAA 72 bp TATCCATATTATCATCCGTCTCAGCTTGTTCCGTGCTaGCCTGGGTCCGCCGCGGTGCTTGGTCTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: YPYYHPSQLVPC*PGSAAVLGLLL
Trigger: CAACAGCAGACCAAGCACCGCGGCGGACCCAGGCAAGCACGGAACAAGCTGAGACGGATGATAATATGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS CCA 72 bp CAACACAGGAACTTCCCGTCCACGAAGAACCCACTATaGTACTTGACCAGCAGGTGGGGGTTACCCCTTATC +
Preference number: 6 (lower is better)
Translates to: QHRNFPSTKNPL*YLTSRWGLPLI
Trigger: GATAAGGGGTAACCCCCACCTGCTGGTCAAGTACCATAGTGGGTTCTTCGTGGACGGGAAGTTCCTGTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000463891.1
CDS CAA 72 bp GAACACGGCCCCGGCTGTCCTGTTTCCAGAAGCAAATaGTTTCACATTTTCCTGGCTGCCGGGTCAGAAATG +
Preference number: 6 (lower is better)
Translates to: EHGPGCPVSRSK*FHIFLAAGSEM
Trigger: CATTTCTGACCCGGCAGCCAGGAAAATGTGAAACAATTTGCTTCTGGAAACAGGACAGCCGGGGCCGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348343.11
CDS TCA 72 bp GGAACTTCCCGTCCACGAAGAACCCACTATGGTACTTaGCCAGCAGGTGGGGGTTACCCCTTATCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: GTSRPRRTHYGT*PAGGGYPLSLF
Trigger: AAAAAGAGATAAGGGGTAACCCCCACCTGCTGGTCAAGTACCATAGTGGGTTCTTCGTGGACGGGAAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000463891.1
CDS CCA 72 bp ATGCAGATTAGCATATGCTTCCCAGAGGGTACATCCTaGGGCTGCTTTACAGCTCTGCTGGCAACACAGGAA +
Preference number: 6 (lower is better)
Translates to: MQISICFPEGTS*GCFTALLATQE
Trigger: TTCCTGTGTTGCCAGCAGAGCTGTAAAGCAGCCCCAGGATGTACCCTCTGGGAAGCATATGCTAATCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000463891.1
CDS CAA 72 bp AGGAACTTCCCGTCCACGAAGAACCCACTATGGTACTaGACCAGCAGGTGGGGGTTACCCCTTATCTCTTTT +
Preference number: 6 (lower is better)
Translates to: RNFPSTKNPLWY*TSRWGLPLISF
Trigger: AAAAGAGATAAGGGGTAACCCCCACCTGCTGGTCAAGTACCATAGTGGGTTCTTCGTGGACGGGAAGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000463891.1
CDS TCA 72 bp GGGCTAGAGTGGTACTTGAAGATGGTGCATCCATTTTaGGAACAGGAACTGCCCGAGGTATCTTCAGCACTC +
Preference number: 6 (lower is better)
Translates to: GLEWYLKMVHPF*EQELPEVSSAL
Trigger: GAGTGCTGAAGATACCTCGGGCAGTTCCTGTTCTCAAAATGGATGCACCATCTTCAAGTACCACTCTAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS CAA 90 bp TCAATGCTTGTCTTTTTCCCGAAGTGGTTCAATGGAAGACAGGAGTaGCTGAAATGTGGGACGCTTTTCTGGAAGCTCGTGCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: SMLVFFPKWFNGRQE*LKCGTLFWKLVPAA
Trigger: AGCTGCTGGCACGAGCTTCCAGAAAAGCGTCCCACATTTCAGCAACTCCTGTCTTCCATTGAACCACTTCGGGAAAAAGACAAGCATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS CAA 72 bp GTCTTTTTCCCGAAGTGGTTCAATGGAAGACAGGAGTaGCTGAAATGTGGGACGCTTTTCTGGAAGCTCGTG +
Preference number: 6 (lower is better)
Translates to: VFFPKWFNGRQE*LKCGTLFWKLV
Trigger: CACGAGCTTCCAGAAAAGCGTCCCACATTTCAGCAACTCCTGTCTTCCATTGAACCACTTCGGGAAAAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS CCA 72 bp TTTTCTTACTTGCCACCAGTCAGGGAAGTCTTCCCTTaGAATATACTGCATGTTGAAGTTTGGCTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: FSYLPPVREVFP*NILHVEVWLGA
Trigger: GGCTCCCAGCCAAACTTCAACATGCAGTATATTCCAAGGGAAGACTTCCCTGACTGGTGGCAAGTAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS GCA 72 bp TCTTCACTGCTGCTGCTACTTTTCAGTTTTCTTACTTaGCACCAGTCAGGGAAGTCTTCCCTTGGAATATAC +
Preference number: 6 (lower is better)
Translates to: SSLLLLLFSFLT*HQSGKSSLGIY
Trigger: GTATATTCCAAGGGAAGACTTCCCTGACTGGTGGCAAGTAAGAAAACTGAAAAGTAGCAGCAGCAGTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
CDS CAA 72 bp GTAATGCTTTCAACCACTGACTTCGGCTCTCTTCATTaGATGCATAGACATAGAGAAGCCCATCTTTATAGA +
Preference number: 6 (lower is better)
Translates to: VMLSTTDFGSLH*MHRHREAHLYR
Trigger: TCTATAAAGATGGGCTTCTCTATGTCTATGCATCAAATGAAGAGAGCCGAAGTCAGTGGTTGAAAGCATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000463891.1
CDS CAA 90 bp TCTCTTTTTGTAATGCTTTCAACCACTGACTTCGGCTCTCTTCATTaGATGCATAGACATAGAGAAGCCCATCTTTATAGACAATCTGAA +
Preference number: 6 (lower is better)
Translates to: SLFVMLSTTDFGSLH*MHRHREAHLYRQSE
Trigger: TTCAGATTGTCTATAAAGATGGGCTTCTCTATGTCTATGCATCAAATGAAGAGAGCCGAAGTCAGTGGTTGAAAGCATTACAAAAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342014.6
ENST00000348343.11
ENST00000357607.6
ENST00000463891.1