RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BMPR1B (Homo sapiens)

Ensembl gene IDs: ENSG00000138696

Ensembl transcript IDs: ENST00000264568.8, ENST00000394931.1, ENST00000440890.7, ENST00000502683.6, ENST00000506363.5, ENST00000509540.6, ENST00000512312.5, ENST00000515059.6, ENST00000672698.1

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGTGTTTGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATaGAGGGATGGCCAAAGTGGTCTGAGGAGGCCAAGACGGGGTGGG +
Preference number: 1 (lower is better)
Translates to: RCLYPVHSHYHSGPK*RDGQSGLRRPRRGG
Trigger: CCCACCCCGTCTTGGCCTCCTCAGACCACTTTGGCCATCCCTGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR TCA 90 bp GAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAGGTCTaGACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGG +
Preference number: 1 (lower is better)
Translates to: ELLCLCPGRSLRGEV*THWEAGRCSRLVLW
Trigger: CCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTTCAGACCTCACCTCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR CCA 90 bp GCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTaGGAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAG +
Preference number: 1 (lower is better)
Translates to: AVSPSYKQTWINLSF*ELLCLCPGRSLRGE
Trigger: CTCACCTCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR GCA 90 bp GAACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATaGTTATTTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACC +
Preference number: 1 (lower is better)
Translates to: EPTGKQDDVQGLYCG*LFDVFCSAHKQKST
Trigger: GGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR TCA 90 bp TGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTaGTGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCT +
Preference number: 1 (lower is better)
Translates to: WEAGRCSRLVLWMLI*CLLLCPQTEEYLLA
Trigger: AGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR GCA 90 bp GACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTaGTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAG +
Preference number: 1 (lower is better)
Translates to: DDVQGLYCGCLFDVF*SAHKQKSTCWLSAE
Trigger: CTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR TCA 90 bp ACAGGCGGTGTTTGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATGCATCGCTCCCTGAGAGGTaGGGTCTGAACCCACTGGGA +
Preference number: 2 (lower is better)
Translates to: TGGVCTQCIHITIAAPNASLPER*GLNPLG
Trigger: TCCCAGTGGGTTCAGACCTCACCTCTCAGGGAGCGA...TGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR CAA 90 bp AGGCCACCTGCAGGAATTCCAAATGTGGTCCTAGACAGGCGGTGTTaGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATGCAGG +
Preference number: 2 (lower is better)
Translates to: RPPAGIPNVVLDRRC*YPVHSHYHSGPKCR
Trigger: CCTGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGTCTAGGACCACATTTGGAATTCCTGCAGGTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR TCA 90 bp AACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACCTGAGAGGTGAGGTCTaGACCCACTGGGAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: NMHHILNKLPKRFLRPTNLRGEV*THWEAG
Trigger: TCCTGCTTCCCAGTGGGTTCAGACCTCACCTCTCAG...GTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR CCA 90 bp CCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGCAGAAGAGTACCTGTTaGCTTTCTGCAGAGATGCTT +
Preference number: 2 (lower is better)
Translates to: PKRFLRPTNRHGSISPSGQKSTC*LSAEML
Trigger: AAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTG...CCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR CAA 90 bp CTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTaGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGC +
Preference number: 2 (lower is better)
Translates to: LGSRTMFKACTVDAY*MSFALPTNRRVPVG
Trigger: GCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR GCA 90 bp ACAGGCGGTGTTTGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATGCAGGCTTGTACTGTGGATaGTTATTTGATGTCTTTTGC +
Preference number: 2 (lower is better)
Translates to: TGGVCTQCIHITIAAPNAGLYCG*LFDVFC
Trigger: GCAAAAGACATCAAATAAGCATCCACAGTACAAGCC...TGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR CCA 90 bp TCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTCAGAAGAGTACCTGTTaGCTTTCTGCAGAGATGCTT +
Preference number: 2 (lower is better)
Translates to: SVLQTDMDQSLLLGASLSQKSTC*LSAEML
Trigger: AAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTG...AGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR TCA 90 bp TTTCTTAGAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCTGAGAGGTGAGGTCTaGACCCACTGGGAAGCAGGA +
Preference number: 2 (lower is better)
Translates to: FLRKQHASYLEQVTQAVSLRGEV*THWEAG
Trigger: TCCTGCTTCCCAGTGGGTTCAGACCTCACCTCTCAG...AGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR TCA 90 bp CTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTGTGGATGCTTATTTaGTGTCTTTTGCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: LEQVTQAVSPSYKQTWINLWMLI*CLLLCP
Trigger: TGGGCAGAGCAAAAGACATCAAATAAGCATCCACAG...ATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR CCA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACCAGAAGAGTACCTGTTaGCTTTCTGCAGAGATGCTT +
Preference number: 2 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHQKSTC*LSAEML
Trigger: AAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTG...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR CCA 90 bp AAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACCAGAAGAGTACCTGTTaGCTTTCTGCAGAGATGCTT +
Preference number: 2 (lower is better)
Translates to: KQHASYLEQVTQAVSPSYQKSTC*LSAEML
Trigger: AAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTG...GTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR GCA 90 bp AAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTACCTGTTGGCTTTCTaGAGAGATGCTTACTTTTCC +
Preference number: 2 (lower is better)
Translates to: KQDDVQGLYCGCLFDVFCYLLAF*RDAYFS
Trigger: GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTA...GCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR GCA 90 bp ATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCATTATTTGATGTCTTTTaGTCTGCCCACAAACAGAAG +
Preference number: 2 (lower is better)
Translates to: ILNKLPKRFLRPTNRHGSLFDVF*SAHKQK
Trigger: CTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAA...TGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR GCA 90 bp GAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTTTATTTGATGTCTTTTaGTCTGCCCACAAACAGAAG +
Preference number: 2 (lower is better)
Translates to: ESNMHHILNKLPKRFLRPLFDVF*SAHKQK
Trigger: CTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAA...AGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR GCA 90 bp AAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACTTATTTGATGTCTTTTaGTCTGCCCACAAACAGAAG +
Preference number: 2 (lower is better)
Translates to: KQHASYLEQVTQAVSPSYLFDVF*SAHKQK
Trigger: CTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAA...GTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR CAA 90 bp ATCACAAAATACAGGGCTTTCTTAGAAAGCAACATGCATCATATCTaGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACAT +
Preference number: 2 (lower is better)
Translates to: ITKYRAFLESNMHHI*NKLPKRFLRPTNRH
Trigger: ATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAAGCCCTGTATTTTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR TCA 90 bp TTTCTTAGAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCTGTGGATGCTTATTTaGTGTCTTTTGCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: FLRKQHASYLEQVTQAVSLWMLI*CLLLCP
Trigger: TGGGCAGAGCAAAAGACATCAAATAAGCATCCACAG...AGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR GCA 90 bp CTAACTCAATCAGAAACAGAAGTGGATCTGAAGAACACCTATCAACAATTACTTTACCTGTTGGCTTTCTaGAGAGATGCTTACTTTTCC +
Preference number: 2 (lower is better)
Translates to: LTQSETEVDLKNTYQQLLYLLAF*RDAYFS
Trigger: GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTA...AAGTAATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTTCTGATTGAGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR CAA 90 bp CTGTCTTCAACACAGCTCATGACAATTTTATTTAATATTGATCCTTaGAATGAGAGATCAAAAGCATGCACAGGTCAATCCTCTGCACAT +
Preference number: 2 (lower is better)
Translates to: LSSTQLMTILFNIDP*NERSKACTGQSSAH
Trigger: ATGTGCAGAGGATTGACCTGTGCATGCTTTTGATCTCTCATTCAAAGGATCAATATTAAATAAAATTGTCATGAGCTGTGTTGAAGACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR TCA 72 bp TGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAGGTCTaGACCCACTGGGAAGCAGGACGATGTTCAAGGCTT +
Preference number: 3 (lower is better)
Translates to: CLCPGRSLRGEV*THWEAGRCSRL
Trigger: AAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTTCAGACCTCACCTCTCAGGGAGCGACCTGGGCAAAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR CAA 90 bp ACAGGCGGTGTTTGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATGCAGGAGCTTCTCTGTCTTaGCCCAGGTCGCTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: TGGVCTQCIHITIAAPNAGASLS*PRSLPE
Trigger: CTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCC...TGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR GCA 72 bp TACCCAGTGCATTCACATTACCATAGCGGCCCCAAATaGAGGGATGGCCAAAGTGGTCTGAGGAGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: YPVHSHYHSGPK*RDGQSGLRRPR
Trigger: TCTTGGCCTCCTCAGACCACTTTGGCCATCCCTGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR CCA 72 bp CCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTaGGAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTG +
Preference number: 3 (lower is better)
Translates to: PSYKQTWINLSF*ELLCLCPGRSL
Trigger: CAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR TCA 72 bp GAGGAGGCCAAGACGGGGTGGGGAGTATGTTTAAGATaGGTTCCGTTCTATGTCCTCCAACTTAGACTGTCT +
Preference number: 3 (lower is better)
Translates to: EEAKTGWGVCLR*VPFYVLQLRLS
Trigger: AGACAGTCTAAGTTGGAGGACATAGAACGGAACTCATCTTAAACATACTCCCCACCCCGTCTTGGCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR CAA 90 bp CCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATACAGAAGAGTACCTGTaGGCTTTCTGCAGAGATGCT +
Preference number: 3 (lower is better)
Translates to: PTGKQDDVQGLYCGCLFDTEEYL*AFCRDA
Trigger: AGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGT...ATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR CAA 90 bp CTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCACTGTGGATGCTTATTaGATGTCTTTTGCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: LRPTNRHGSISPSGSFSVTVDAY*MSFALP
Trigger: GGGCAGAGCAAAAGACATCAAATAAGCATCCACAGT...GACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR CAA 90 bp CTAACTCAATCAGAAACAGAAGTGGATCTGAAGAACACCTATCAACAATTACTTGGAGCTTCTCTGTCTTaGCCCAGGTCGCTCCCTGAG +
Preference number: 3 (lower is better)
Translates to: LTQSETEVDLKNTYQQLLGASLS*PRSLPE
Trigger: CTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCC...AAGTAATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTTCTGATTGAGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR CAA 90 bp AACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACACAGAAGAGTACCTGTaGGCTTTCTGCAGAGATGCT +
Preference number: 3 (lower is better)
Translates to: NMHHILNKLPKRFLRPTNTEEYL*AFCRDA
Trigger: AGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGT...GTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR TCA 72 bp GGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTaGTGTCTTTTGCTCTGCCCACAAACAGAAGAGTAC +
Preference number: 3 (lower is better)
Translates to: GRCSRLVLWMLI*CLLLCPQTEEY
Trigger: GTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR GCA 72 bp CAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTaGTCTGCCCACAAACAGAAGAGTACCTGTTGGCTT +
Preference number: 3 (lower is better)
Translates to: QGLYCGCLFDVF*SAHKQKSTCWL
Trigger: AAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR GCA 72 bp GGAATTCAAAAATGGGCACTAATGACTTTTGAGCAGTaGTTTCCAGGAGGTCAAAGGCCTGTTTCCTCATAC +
Preference number: 3 (lower is better)
Translates to: GIQKWALMTFEQ*FPGGQRPVSSY
Trigger: GTATGAGGAAACAGGCCTTTGACCTCCTGGAAAGCACTGCTCAAAAGTCATTAGTGCCCATTTTTGAATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440890.7
ENST00000515059.6
3UTR-3UTR CAA 90 bp TATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCGACGATGTTCAAGGCTaGTACTGTGGATGCTTATTT +
Preference number: 3 (lower is better)
Translates to: YLEQVTQAVSPSYKQTWIDDVQG*YCGCLF
Trigger: AAATAAGCATCCACAGTACAAGCCTTGAACATCGTC...GATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR CAA 90 bp TTTCTTAGAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTACAGAAGAGTACCTGTaGGCTTTCTGCAGAGATGCT +
Preference number: 3 (lower is better)
Translates to: FLRKQHASYLEQVTQAVSTEEYL*AFCRDA
Trigger: AGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGT...AGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR CAA 90 bp CTAACTCAATCAGAAACAGAAGTGGATCTGAAGAACACCTATCAACAATTACTTACAGAAGAGTACCTGTaGGCTTTCTGCAGAGATGCT +
Preference number: 3 (lower is better)
Translates to: LTQSETEVDLKNTYQQLLTEEYL*AFCRDA
Trigger: AGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGT...AAGTAATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTTCTGATTGAGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR TCA 72 bp CTCACAAAGTCTCATTGCTTTAGAATGTTTTCTGGATaGACAAGTTACCAGCTGCAAACCGACTTCAGAAGT +
Preference number: 3 (lower is better)
Translates to: LTKSHCFRMFSG*TSYQLQTDFRS
Trigger: ACTTCTGAAGTCGGTTTGCAGCTGGTAACTTGTTCATCCAGAAAACATTCTAAAGCAATGAGACTTTGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR-3UTR CAA 90 bp CTAACTCAATCAGAAACAGAAGTGGATCTGAAGAACACCTATCAACAATTACTTGACGATGTTCAAGGCTaGTACTGTGGATGCTTATTT +
Preference number: 3 (lower is better)
Translates to: LTQSETEVDLKNTYQQLLDDVQG*YCGCLF
Trigger: AAATAAGCATCCACAGTACAAGCCTTGAACATCGTC...AAGTAATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTTCTGATTGAGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR TCA 72 bp TGTATTCATGTTGCTAAACAATATTGGCCTTCTCGATaGTTTTATTCATGTTGCTCCAAAGTTAAAACCCTG +
Preference number: 3 (lower is better)
Translates to: CIHVAKQYWPSR*FYSCCSKVKTL
Trigger: CAGGGTTTTAACTTTGGAGCAACATGAATAAAATCATCGAGAAGGCCAATATTGTTTAGCAACATGAATACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAGGTCGGAGTGTCCCGACACTaGAAATCTGAGCCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: SFWELLCLCPGRSLRGEVGVSRH*KSEPSS
Trigger: ACTAGAAGGCTCAGATTTTCAGTGTCGGGACACTCC...GACCTCACCTCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAGGTCCATAAGAGGGGTCACTaGGCACTAGGTCATGATAAG +
Preference number: 4 (lower is better)
Translates to: SFWELLCLCPGRSLRGEVHKRGH*ALGHDK
Trigger: CTTATCATGACCTAGTGCCCAGTGACCCCTCTTATG...GACCTCACCTCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGCTAGGCAACCAGAAGTaGCCACAGGCAACCCAGAGT +
Preference number: 4 (lower is better)
Translates to: TDMDQSLLLGASLSLPRSLGNQK*PQATQS
Trigger: ACTCTGGGTTGCCTGTGGTCACTTCTGGTTGCCTAG...CGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCCAGGGCTGTCAGCCTTaGTGCAGGATTGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LRPTNRHGSISPSGSFSVQGCQP*CRIVSP
Trigger: TGGGCTCACAATCCTGCATCAAGGCTGACAGCCCTG...GACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CAAAAGGCCACCTGCAGGAATTCCAAATGTGGTCCTAGACAGGCGGTGTTTGTACAGGGCTGTCAGCCTTaGTGCAGGATTGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QKATCRNSKCGPRQAVFVQGCQP*CRIVSP
Trigger: TGGGCTCACAATCCTGCATCAAGGCTGACAGCCCTG...TACAAACACCGCCTGTCTAGGACCACATTTGGAATTCCTGCAGGTGGCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAGGTCCTGTGGATGCTTATTTaGTGTCTTTTGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SFWELLCLCPGRSLRGEVLWMLI*CLLLCP
Trigger: TGGGCAGAGCAAAAGACATCAAATAAGCATCCACAG...GACCTCACCTCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGTCGCTCCCTGAGAGGTaGGGTCTGAACCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: DVFCSAHKQKSTCWLSAESLPER*GLNPLG
Trigger: TCCCAGTGGGTTCAGACCTCACCTCTCAGGGAGCGA...CTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTCGCTCCCTGAGAGGTaGGGTCTGAACCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: PSYKQTWINLSFWELLCLSLPER*GLNPLG
Trigger: TCCCAGTGGGTTCAGACCTCACCTCTCAGGGAGCGA...AAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAGGTCCTATACTTCTCTCAGTaGCGTTCCACCCACAAACAA +
Preference number: 4 (lower is better)
Translates to: SFWELLCLCPGRSLRGEVLYFSQ*RSTHKQ
Trigger: TTGTTTGTGGGTGGAACGGCACTGAGAGAAGTATAG...GACCTCACCTCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440890.7
ENST00000515059.6
CDS-3UTR CCA 90 bp TCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAGGTCATCAATCTCTCCTTCTaGGAGCTTCTCTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SFWELLCLCPGRSLRGEVINLSF*ELLCLC
Trigger: GCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGAT...GACCTCACCTCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR CAA 72 bp GCAGGAATTCCAAATGTGGTCCTAGACAGGCGGTGTTaGTACCCAGTGCATTCACATTACCATAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: AGIPNVVLDRRC*YPVHSHYHSGP
Trigger: GGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGTCTAGGACCACATTTGGAATTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATCAGGGCTGTCAGCCTTaGTGCAGGATTGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PTGKQDDVQGLYCGCLFDQGCQP*CRIVSP
Trigger: TGGGCTCACAATCCTGCATCAAGGCTGACAGCCCTG...ATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAGGTCAAGTTTGCCCTTGTGTaGATAGAGAGAAGAATGAGC +
Preference number: 4 (lower is better)
Translates to: SFWELLCLCPGRSLRGEVKFALV*IERRMS
Trigger: GCTCATTCTTCTCTCTATGCACACAAGGGCAAACTT...GACCTCACCTCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440890.7
CDS-3UTR CCA 90 bp TCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAGGTCTCCTACAAACAGACATaGATCAATCTCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SFWELLCLCPGRSLRGEVSYKQT*INLSFW
Trigger: CCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGA...GACCTCACCTCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp GATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGCAGGGATGGCCAAAGTaGTCTGAGGAGGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: DVFCSAHKQKSTCWLSAEQGWPK*SEEAKT
Trigger: CGTCTTGGCCTCCTCAGACCACTTTGGCCATCCCTG...CTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTCAGGGATGGCCAAAGTaGTCTGAGGAGGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: PSYKQTWINLSFWELLCLQGWPK*SEEAKT
Trigger: CGTCTTGGCCTCCTCAGACCACTTTGGCCATCCCTG...AAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGCTAGGCAACCAGAAGTaGCCACAGGCAACCCAGAGT +
Preference number: 4 (lower is better)
Translates to: DVFCSAHKQKSTCWLSAELGNQK*PQATQS
Trigger: ACTCTGGGTTGCCTGTGGTCACTTCTGGTTGCCTAG...CTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGGGAGTGTCCCGACACTaGAAATCTGAGCCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: PKRFLRPTNRHGSISPSGGVSRH*KSEPSS
Trigger: ACTAGAAGGCTCAGATTTTCAGTGTCGGGACACTCC...CCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCCTGAGAGGTGAGGTCTaGACCCACTGGGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CPQTEEYLLAFCRDAYFSLRGEV*THWEAG
Trigger: TCCTGCTTCCCAGTGGGTTCAGACCTCACCTCTCAG...GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGCTGAGAGGTGAGGTCTaGACCCACTGGGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQLRGEV*THWEAG
Trigger: TCCTGCTTCCCAGTGGGTTCAGACCTCACCTCTCAG...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCTCGCTCCCTGAGAGGTaGGGTCTGAACCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLSLPER*GLNPLG
Trigger: TCCCAGTGGGTTCAGACCTCACCTCTCAGGGAGCGA...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTTCGCTCCCTGAGAGGTaGGGTCTGAACCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: ESNMHHILNKLPKRFLRPSLPER*GLNPLG
Trigger: TCCCAGTGGGTTCAGACCTCACCTCTCAGGGAGCGA...AGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTGAGCTTCTCTGTCTTTaGCCAGGTCGCTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: PSYKQTWINLSFWELLCLELLCL*PGRSLR
Trigger: TCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTC...AAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCGAGCTTCTCTGTCTTTaGCCAGGTCGCTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SFALPTNRRVPVGFLQRCELLCL*PGRSLR
Trigger: TCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTC...GCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTGGAGTGTCCCGACACTaGAAATCTGAGCCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: AVSPSYKQTWINLSFWELGVSRH*KSEPSS
Trigger: ACTAGAAGGCTCAGATTTTCAGTGTCGGGACACTCC...AAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACCAGGGCTGTCAGCCTTaGTGCAGGATTGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHQGCQP*CRIVSP
Trigger: TGGGCTCACAATCCTGCATCAAGGCTGACAGCCCTG...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCACTGAGAGGTGAGGTCTaGACCCACTGGGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ILNKLPKRFLRPTNRHGSLRGEV*THWEAG
Trigger: TCCTGCTTCCCAGTGGGTTCAGACCTCACCTCTCAG...TGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAGGTCAAACAGAAGTGGATCTaGAGAACACCTATCAACAAT +
Preference number: 4 (lower is better)
Translates to: SFWELLCLCPGRSLRGEVKQKWI*RTPINN
Trigger: ATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTT...GACCTCACCTCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGCATAGCGGCCCCAAATaGAGGGATGGCCAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQHSGPK*RDGQSG
Trigger: ACCACTTTGGCCATCCCTGCATTTGGGGCCGCTATG...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGTCTGGACAATGGTGGTaGCATTTACAACGCAAGACC +
Preference number: 4 (lower is better)
Translates to: PKRFLRPTNRHGSISPSGSGQWW*HLQRKT
Trigger: GGTCTTGCGTTGTAAATGCCACCACCATTGTCCAGA...CCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTGTGATTAGGTACAACTaGGTCCAGGACCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: KQTWINLSFWELLCLCPGVIRYN*VQDPVP
Trigger: AGGGACAGGGTCCTGGACCCAGTTGTACCTAATCAC...ACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTGTGATTAGGTACAACTaGGTCCAGGACCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: SVLQTDMDQSLLLGASLSVIRYN*VQDPVP
Trigger: AGGGACAGGGTCCTGGACCCAGTTGTACCTAATCAC...AGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACCAGGGATGGCCAAAGTaGTCTGAGGAGGCCAAGACG +
Preference number: 4 (lower is better)
Translates to: KQHASYLEQVTQAVSPSYQGWPK*SEEAKT
Trigger: CGTCTTGGCCTCCTCAGACCACTTTGGCCATCCCTG...GTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCTAGGCAACCAGAAGTaGCCACAGGCAACCCAGAGT +
Preference number: 4 (lower is better)
Translates to: DDVQGLYCGCLFDVFCSALGNQK*PQATQS
Trigger: ACTCTGGGTTGCCTGTGGTCACTTCTGGTTGCCTAG...GGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTCTAGGCAACCAGAAGTaGCCACAGGCAACCCAGAGT +
Preference number: 4 (lower is better)
Translates to: ESNMHHILNKLPKRFLRPLGNQK*PQATQS
Trigger: ACTCTGGGTTGCCTGTGGTCACTTCTGGTTGCCTAG...AGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGGGAGTGTCCCGACACTaGAAATCTGAGCCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMGVSRH*KSEPSS
Trigger: ACTAGAAGGCTCAGATTTTCAGTGTCGGGACACTCC...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CAAAAGGCCACCTGCAGGAATTCCAAATGTGGTCCTAGACAGGCGGTGTTTGTACCCAGCATTCTGTCATaGGTTTTCCCATCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: QKATCRNSKCGPRQAVFVPSILS*VFPSAL
Trigger: TAAGGCAGATGGGAAAACTCATGACAGAATGCTGGG...TACAAACACCGCCTGTCTAGGACCACATTTGGAATTCCTGCAGGTGGCCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCAGGGCTGTCAGCCTTaGTGCAGGATTGTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RTMFKACTVDAYLMSFALQGCQP*CRIVSP
Trigger: TGGGCTCACAATCCTGCATCAAGGCTGACAGCCCTG...CAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ACAGGCGGTGTTTGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATGCACTGTGGATGCTTATTTaGTGTCTTTTGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TGGVCTQCIHITIAAPNALWMLI*CLLLCP
Trigger: TGGGCAGAGCAAAAGACATCAAATAAGCATCCACAG...TGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp GATGAGTTCCGTTCTATGTCCTCCAACTTAGACTGTCTTTTGGTTCACAGAGTGGAGCTTCTCTGTCTTTaGCCAGGTCGCTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: DEFRSMSSNLDCLLVHRVELLCL*PGRSLR
Trigger: TCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTC...CACTCTGTGAACCAAAAGACAGTCTAAGTTGGAGGACATAGAACGGAACTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCCTGCAAAAGGCCACCTaGAGGAATTCCAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: LRPTNRHGSISPSGSFSVLQKAT*RNSKCG
Trigger: ACCACATTTGGAATTCCTGCAGGTGGCCTTTTGCAG...GACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp ACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGGAGAGATCAAAAGCATaGACAGGTCAATCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: TDMDQSLLLGASLSLPRSERSKA*TGQSSA
Trigger: TGCAGAGGATTGACCTGTGCATGCTTTTGATCTCTC...CGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp ACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGAAGATACAAGCCATCTaGACGATCACCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: TDMDQSLLLGASLSLPRSKIQAI*TITLIS
Trigger: GGAAATGAGGGTGATCGTGCAGATGGCTTGTATCTT...CGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGTCTTCTGGACAATGGTaGTGGCATTTACAACGCAAG +
Preference number: 4 (lower is better)
Translates to: PKRFLRPTNRHGSISPSGSSGQW*WHLQRK
Trigger: CTTGCGTTGTAAATGCCACCACCATTGTCCAGAAGA...CCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGTTCTTTGATGAGGAATaGGAGTGTCCCGACACTGAA +
Preference number: 4 (lower is better)
Translates to: PKRFLRPTNRHGSISPSGFFDEE*ECPDTE
Trigger: TTCAGTGTCGGGACACTCCCATTCCTCATCAAAGAA...CCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp ACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGCAGAAGAGTACCTGTTaGCTTTCTGCAGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: TDMDQSLLLGASLSLPRSQKSTC*LSAEML
Trigger: AAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTG...CGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp GCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTGCCCATAACAGTTTGTaGCCTCTACTAACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: AVSPSYKQTWINLSFWELAHNSL*PLLTVL
Trigger: GAGGACAGTTAGTAGAGGCCACAAACTGTTATGGGC...AAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGGCAAATATTGTTGACTaGGTCTTCTGGACAATGGTG +
Preference number: 4 (lower is better)
Translates to: PKRFLRPTNRHGSISPSGANIVD*VFWTMV
Trigger: CACCATTGTCCAGAAGACTCAGTCAACAATATTTGC...CCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCCTAGGCAACCAGAAGTaGCCACAGGCAACCCAGAGT +
Preference number: 4 (lower is better)
Translates to: KQDDVQGLYCGCLFDVFCLGNQK*PQATQS
Trigger: ACTCTGGGTTGCCTGTGGTCACTTCTGGTTGCCTAG...GCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGCCACTTCCTGAGCTCTaGGACTGCTCAATTAAGTCT +
Preference number: 4 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMPLPEL*DCSIKS
Trigger: AGACTTAATTGAGCAGTCTCAGAGCTCAGGAAGTGG...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCCCACTTCCTGAGCTCTaGGACTGCTCAATTAAGTCT +
Preference number: 4 (lower is better)
Translates to: SFALPTNRRVPVGFLQRCPLPEL*DCSIKS
Trigger: AGACTTAATTGAGCAGTCTCAGAGCTCAGGAAGTGG...GCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGGCTTCCTCTGTGGTaGAGAACACTTTCACAGCTA +
Preference number: 4 (lower is better)
Translates to: VSPSYKQTWINLSFWELLWLPLW*RTLSQL
Trigger: TAGCTGTGAAAGTGTTCTTCACCACAGAGGAAGCCA...GAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGGCTTCCTCTGTGGTaGAGAACACTTTCACAGCTA +
Preference number: 4 (lower is better)
Translates to: PSYKQTWINLSFWELLCLWLPLW*RTLSQL
Trigger: TAGCTGTGAAAGTGTTCTTCACCACAGAGGAAGCCA...AAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGCCCAGCATTCTGTCATaGGTTTTCCCATCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMPSILS*VFPSAL
Trigger: TAAGGCAGATGGGAAAACTCATGACAGAATGCTGGG...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTGTTCCATATTGCCTaGAGCTGCAAAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: SFALPTNRRVPVGFLQRCLFHIA*SCKRPP
Trigger: AGGTGGCCTTTTGCAGCTTCAGGCAATATGGAACAA...GCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCGAATCAGCAGAAGTCTaGACCTTAAATCTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PTNRHGSISPSGSFSVFAESAEV*TLNLGP
Trigger: GGGCCCAAGATTTAAGGTTCAGACTTCTGCTGATTC...GGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672698.1
CDS-3UTR GCA 90 bp CAAAAGGCCACCTGCAGGAATTCCAAATGTGGTCCTAGACAGGCGGTGTTTGTACCTGTTCTAACCCAATaGTGTATCGAGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: QKATCRNSKCGPRQAVFVPVLTQ*CIEVWF
Trigger: AAACCAGACCTCGATACAGCATTGGGTTAGAACAGG...TACAAACACCGCCTGTCTAGGACCACATTTGGAATTCCTGCAGGTGGCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTTTAGACACTCATCACTaGTCCACCGGTTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: KQTWINLSFWELLCLCPGLDTHH*STGLGM
Trigger: CATTCCCAAACCGGTGGAGCAGTGATGAGTGTCTAA...ACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp ATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACACATAGCGGCCCCAAATaGAGGGATGGCCAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: MFKACTVDAYLMSFALPTHSGPK*RDGQSG
Trigger: ACCACTTTGGCCATCCCTGCATTTGGGGCCGCTATG...TGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCATAGCGGCCCCAAATaGAGGGATGGCCAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: RTMFKACTVDAYLMSFALHSGPK*RDGQSG
Trigger: ACCACTTTGGCCATCCCTGCATTTGGGGCCGCTATG...CAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGCTGCAAAAGGCCACCTaGAGGAATTCCAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLLQKAT*RNSKCG
Trigger: ACCACATTTGGAATTCCTGCAGGTGGCCTTTTGCAG...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp ACAGGCGGTGTTTGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATGCATCATTTGTTCCATATTaGCTGAAGCTGCAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TGGVCTQCIHITIAAPNASFVPY*LKLQKA
Trigger: GGCCTTTTGCAGCTTCAGGCAATATGGAACAAATGA...TGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTGTGATTAGGTACAACTaGGTCCAGGACCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PQTEEYLLAFCRDAYFSSVIRYN*VQDPVP
Trigger: AGGGACAGGGTCCTGGACCCAGTTGTACCTAATCAC...AGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCATAAGAGGGGTCACTaGGCACTAGGTCATGATAAG +
Preference number: 4 (lower is better)
Translates to: PTNRHGSISPSGSFSVFAHKRGH*ALGHDK
Trigger: CTTATCATGACCTAGTGCCCAGTGACCCCTCTTATG...GGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCTTCCCATCCTTCATTaGAACCAACACCTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: KQTWINLSFWELLCLCPGLPILH*NQHLPR
Trigger: TCTAGGGAGGTGTTGGTTCCAATGAAGGATGGGAAG...ACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp GATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGCTTCCCATCCTTCATTaGAACCAACACCTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: DVFCSAHKQKSTCWLSAELPILH*NQHLPR
Trigger: TCTAGGGAGGTGTTGGTTCCAATGAAGGATGGGAAG...CTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGCCTCTTCTATCATCGTaGAACAATATCCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMPLLSS*NNIRLC
Trigger: GCACAGACGGATATTGTTTCACGATGATAGAAGAGG...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGCCTCTTCTATCATCGTaGAACAATATCCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLPLLSS*NNIRLC
Trigger: GCACAGACGGATATTGTTTCACGATGATAGAAGAGG...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCGGAGTGTCCCGACACTaGAAATCTGAGCCTTCTAGT +
Preference number: 4 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLGVSRH*KSEPSS
Trigger: ACTAGAAGGCTCAGATTTTCAGTGTCGGGACACTCC...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGATCTGTTTCACCATCTaGATCTGCTTAGCTATAGTC +
Preference number: 4 (lower is better)
Translates to: PKRFLRPTNRHGSISPSGICFTI*ICLAIV
Trigger: GACTATAGCTAAGCAGATTCAGATGGTGAAACAGAT...CCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGGCTTCCTCTGTGGTaGAGAACACTTTCACAGCTA +
Preference number: 4 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRWLPLW*RTLSQL
Trigger: TAGCTGTGAAAGTGTTCTTCACCACAGAGGAAGCCA...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CAAAAGGCCACCTGCAGGAATTCCAAATGTGGTCCTAGACAGGCGGTGTTTGTAAATGACATAAGCCACTaGCAGAAGAGTAGGCTAACT +
Preference number: 4 (lower is better)
Translates to: QKATCRNSKCGPRQAVFVNDISH*QKSRLT
Trigger: AGTTAGCCTACTCTTCTGTCAGTGGCTTATGTCATT...TACAAACACCGCCTGTCTAGGACCACATTTGGAATTCCTGCAGGTGGCCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTTCCACTATACCTCCTaGTACACATCTCCTAGCAAC +
Preference number: 4 (lower is better)
Translates to: PSYKQTWINLSFWELLCLFHYTS*YTSPSN
Trigger: GTTGCTAGGAGATGTGTATCAGGAGGTATAGTGGAA...AAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTTCCACTATACCTCCTaGTACACATCTCCTAGCAAC +
Preference number: 4 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMFHYTS*YTSPSN
Trigger: GTTGCTAGGAGATGTGTATCAGGAGGTATAGTGGAA...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCAGGGGCGTAACTTCTTaGTGCACACAATCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLRGVTS*CTQSPS
Trigger: TGAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCT...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GATGAGTTCCGTTCTATGTCCTCCAACTTAGACTGTCTTTTGGTTCACAGAGTGAGGGGCGTAACTTCTTaGTGCACACAATCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: DEFRSMSSNLDCLLVHRVRGVTS*CTQSPS
Trigger: TGAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCT...CACTCTGTGAACCAAAAGACAGTCTAAGTTGGAGGACATAGAACGGAACTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCCTGTGGATGCTTATTTaGTGTCTTTTGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SFALPTNRRVPVGFLQRCLWMLI*CLLLCP
Trigger: TGGGCAGAGCAAAAGACATCAAATAAGCATCCACAG...GCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATTGTTCCATATTGCCTaGAGCTGCAAAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRLFHIA*SCKRPP
Trigger: AGGTGGCCTTTTGCAGCTTCAGGCAATATGGAACAA...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ACAGGCGGTGTTTGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATGCATTTTCTTTGTGCTTCTaGGATTGGCTCCTTTGCATA +
Preference number: 4 (lower is better)
Translates to: TGGVCTQCIHITIAAPNAFSLCF*DWLLCI
Trigger: TATGCAAAGGAGCCAATCTCAGAAGCACAAAGAAAA...TGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGAACCGACTTCAGAAGTaGGGAAAATGTTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: TDMDQSLLLGASLSLPRSNRLQK*GKCFLM
Trigger: CATGAGAAAACATTTTCCTCACTTCTGAAGTCGGTT...CGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ACAGGCGGTGTTTGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATGCAAGAATGTTTTCTGGATaGACAAGTTACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: TGGVCTQCIHITIAAPNARMFSG*TSYQLQ
Trigger: TTGCAGCTGGTAACTTGTTCATCCAGAAAACATTCT...TGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp GATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGCCTGTTCTAACCCAATaGTGTATCGAGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: DVFCSAHKQKSTCWLSAEPVLTQ*CIEVWF
Trigger: AAACCAGACCTCGATACAGCATTGGGTTAGAACAGG...CTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCCTGTTCTAACCCAATaGTGTATCGAGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KQTWINLSFWELLCLCPGPVLTQ*CIEVWF
Trigger: AAACCAGACCTCGATACAGCATTGGGTTAGAACAGG...ACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCCCTGTTCTAACCCAATaGTGTATCGAGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SFALPTNRRVPVGFLQRCPVLTQ*CIEVWF
Trigger: AAACCAGACCTCGATACAGCATTGGGTTAGAACAGG...GCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTTAGACACTCATCACTaGTCCACCGGTTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: CPQTEEYLLAFCRDAYFSLDTHH*STGLGM
Trigger: CATTCCCAAACCGGTGGAGCAGTGATGAGTGTCTAA...GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATTAGACACTCATCACTaGTCCACCGGTTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRLDTHH*STGLGM
Trigger: CATTCCCAAACCGGTGGAGCAGTGATGAGTGTCTAA...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCATGAGTTTTCCCATCTaGCTTAGACACTCATCACTG +
Preference number: 4 (lower is better)
Translates to: LRPTNRHGSISPSGSFSVMSFPI*LRHSSL
Trigger: CAGTGATGAGTGTCTAAGGCAGATGGGAAAACTCAT...GACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp GAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTTTCCAGCCAACCCATTaGAGCAGCAGAGCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: ESNMHHILNKLPKRFLRPFQPTH*SSRAVN
Trigger: ATTGACTGCTCTGCTGCTGCAATGGGTTGGCTGGAA...AGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440890.7
CDS-3UTR GCA 90 bp TCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCGGTGTTTGTACCCAGTaGATTCACATTACCATAGCG +
Preference number: 4 (lower is better)
Translates to: SFALPTNRRVPVGFLQRCGVCTQ*IHITIA
Trigger: CGCTATGGTAATGTGAATGCACTGGGTACAAACACC...GCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGGAGAGATCAAAAGCATaGACAGGTCAATCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLERSKA*TGQSSA
Trigger: TGCAGAGGATTGACCTGTGCATGCTTTTGATCTCTC...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp GATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGAAGATACAAGCCATCTaGACGATCACCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: DVFCSAHKQKSTCWLSAEKIQAI*TITLIS
Trigger: GGAAATGAGGGTGATCGTGCAGATGGCTTGTATCTT...CTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGATGACTTTTGAGCAGTaGTTTCCAGGAGGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMMTFEQ*FPGGQR
Trigger: CCTTTGACCTCCTGGAAAGCACTGCTCAAAAGTCAT...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440890.7
ENST00000515059.6
CDS-3UTR CCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGTCTGGACAATGGTGGTaGCATTTACAACGCAAGACC +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQSGQWW*HLQRKT
Trigger: GGTCTTGCGTTGTAAATGCCACCACCATTGTCCAGA...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTGGACAATGGTGGTaGCATTTACAACGCAAGACC +
Preference number: 4 (lower is better)
Translates to: CPQTEEYLLAFCRDAYFSSGQWW*HLQRKT
Trigger: GGTCTTGCGTTGTAAATGCCACCACCATTGTCCAGA...GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTCTGGACAATGGTaGTGGCATTTACAACGCAAG +
Preference number: 4 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMSSGQW*WHLQRK
Trigger: CTTGCGTTGTAAATGCCACCACCATTGTCCAGAAGA...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCTCTTCTGGACAATGGTaGTGGCATTTACAACGCAAG +
Preference number: 4 (lower is better)
Translates to: PTNRHGSISPSGSFSVFASSGQW*WHLQRK
Trigger: CTTGCGTTGTAAATGCCACCACCATTGTCCAGAAGA...GGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp GTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTCTTCTGGACAATGGTaGTGGCATTTACAACGCAAG +
Preference number: 4 (lower is better)
Translates to: VSPSYKQTWINLSFWELLSSGQW*WHLQRK
Trigger: CTTGCGTTGTAAATGCCACCACCATTGTCCAGAAGA...GAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTCTTTGATGAGGAATaGGAGTGTCCCGACACTGAA +
Preference number: 4 (lower is better)
Translates to: SFALPTNRRVPVGFLQRCFFDEE*ECPDTE
Trigger: TTCAGTGTCGGGACACTCCCATTCCTCATCAAAGAA...GCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATTTCTTTGATGAGGAATaGGAGTGTCCCGACACTGAA +
Preference number: 4 (lower is better)
Translates to: PTGKQDDVQGLYCGCLFDFFDEE*ECPDTE
Trigger: TTCAGTGTCGGGACACTCCCATTCCTCATCAAAGAA...ATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp ACAGGCGGTGTTTGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATGCAATAAGTAAAGCCCTGTaGTGTATAGGTCCATCAACA +
Preference number: 4 (lower is better)
Translates to: TGGVCTQCIHITIAAPNAISKAL*CIGPST
Trigger: TGTTGATGGACCTATACACCACAGGGCTTTACTTAT...TGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACGTGATTAGGTACAACTaGGTCCAGGACCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: NMHHILNKLPKRFLRPTNVIRYN*VQDPVP
Trigger: AGGGACAGGGTCCTGGACCCAGTTGTACCTAATCAC...GTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGCTTTTCAGATCTCGATaGGCAATTGCTGGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLLFRSR*AIAGLP
Trigger: AGGCAAACCAGCAATTGCCCATCGAGATCTGAAAAG...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCCAGAAGAGTACCTGTTaGCTTTCTGCAGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: SFALPTNRRVPVGFLQRCQKSTC*LSAEML
Trigger: AAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTG...GCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATCAGAAGAGTACCTGTTaGCTTTCTGCAGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: PTGKQDDVQGLYCGCLFDQKSTC*LSAEML
Trigger: AAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTG...ATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CAAAAGGCCACCTGCAGGAATTCCAAATGTGGTCCTAGACAGGCGGTGTTTGTATCCTACAAACAGACATaGATCAATCTCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QKATCRNSKCGPRQAVFVSYKQT*INLSFW
Trigger: CCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGA...TACAAACACCGCCTGTCTAGGACCACATTTGGAATTCCTGCAGGTGGCCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp ACAGGCGGTGTTTGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATGCACCTTGTGAAGTCTGTTaGCTCTTTACAGTTAGTGAA +
Preference number: 4 (lower is better)
Translates to: TGGVCTQCIHITIAAPNAPCEVC*LFTVSE
Trigger: TTCACTAACTGTAAAGAGCCAACAGACTTCACAAGG...TGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672698.1
CDS-3UTR TCA 90 bp CTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTGCTGCAAATATTGTTaGCTGAGTCTTCTGGACAAT +
Preference number: 4 (lower is better)
Translates to: LRPTNRHGSISPSGSFSVCCKYC*LSLLDN
Trigger: ATTGTCCAGAAGACTCAGTCAACAATATTTGCAGCA...GACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGACCTCTTCTATCATCGTaGAACAATATCCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRPLLSS*NNIRLC
Trigger: GCACAGACGGATATTGTTTCACGATGATAGAAGAGG...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCACCACTTCCTGAGCTCTaGGACTGCTCAATTAAGTCT +
Preference number: 4 (lower is better)
Translates to: ILNKLPKRFLRPTNRHGSPLPEL*DCSIKS
Trigger: AGACTTAATTGAGCAGTCTCAGAGCTCAGGAAGTGG...TGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACCCACTTCCTGAGCTCTaGGACTGCTCAATTAAGTCT +
Preference number: 4 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHPLPEL*DCSIKS
Trigger: AGACTTAATTGAGCAGTCTCAGAGCTCAGGAAGTGG...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTCCACTTCCTGAGCTCTaGGACTGCTCAATTAAGTCT +
Preference number: 4 (lower is better)
Translates to: ESNMHHILNKLPKRFLRPPLPEL*DCSIKS
Trigger: AGACTTAATTGAGCAGTCTCAGAGCTCAGGAAGTGG...AGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCATCTGTTTCACCATCTaGATCTGCTTAGCTATAGTC +
Preference number: 4 (lower is better)
Translates to: LRPTNRHGSISPSGSFSVICFTI*ICLAIV
Trigger: GACTATAGCTAAGCAGATTCAGATGGTGAAACAGAT...GACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACTGGCTTCCTCTGTGGTaGAGAACACTTTCACAGCTA +
Preference number: 4 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHWLPLW*RTLSQL
Trigger: TAGCTGTGAAAGTGTTCTTCACCACAGAGGAAGCCA...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCTGGCTTCCTCTGTGGTaGAGAACACTTTCACAGCTA +
Preference number: 4 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLWLPLW*RTLSQL
Trigger: TAGCTGTGAAAGTGTTCTTCACCACAGAGGAAGCCA...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGAATGACATAAGCCACTaGCAGAAGAGTAGGCTAACT +
Preference number: 4 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMNDISH*QKSRLT
Trigger: AGTTAGCCTACTCTTCTGTCAGTGGCTTATGTCATT...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTAATGACATAAGCCACTaGCAGAAGAGTAGGCTAACT +
Preference number: 4 (lower is better)
Translates to: SVLQTDMDQSLLLGASLSNDISH*QKSRLT
Trigger: AGTTAGCCTACTCTTCTGTCAGTGGCTTATGTCATT...AGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGATTTCTGTGTGTAAATaGCATAAGCCACTGACAGAA +
Preference number: 4 (lower is better)
Translates to: PKRFLRPTNRHGSISPSGISVCK*HKPLTE
Trigger: TTCTGTCAGTGGCTTATGTCATTTACACACAGAAAT...CCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCAGGGGCGTAACTTCTTaGTGCACACAATCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: KQDDVQGLYCGCLFDVFCRGVTS*CTQSPS
Trigger: TGAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCT...GCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTAATGTCCTGGGACTCTaGCATTTTGGCAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: PSYKQTWINLSFWELLCLNVLGL*HFGKCF
Trigger: AAAACACTTGCCAAAATGTCAGAGTCCCAGGACATT...AAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTACATGCATCATATCTTaGACAAGTTACCCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: PSYKQTWINLSFWELLCLTCIIS*TSYPSG
Trigger: ACCGCTTGGGTAACTTGTTCAAGATATGATGCATGT...AAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTGGAGTATGTTTAAGATaGGTTCCGTTCTATGTCCTC +
Preference number: 4 (lower is better)
Translates to: SVLQTDMDQSLLLGASLSGVCLR*VPFYVL
Trigger: GAGGACATAGAACGGAACTCATCTTAAACATACTCC...AGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTTTGTTCCATATTGCCTaGAGCTGCAAAAGGCCACCT +
Preference number: 4 (lower is better)
Translates to: QTEEYLLAFCRDAYFSSPLFHIA*SCKRPP
Trigger: AGGTGGCCTTTTGCAGCTTCAGGCAATATGGAACAA...AGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTCTTCAAGGCTCAGATaGTTAGTCACACTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: LRPTNRHGSISPSGSFSVSSRLR*LVTLSS
Trigger: AGAACTAAGTGTGACTAATCATCTGAGCCTTGAAGA...GACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGAGAGCCAAATGGTTATaGATCAGCAGAAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLRAKWL*ISRSLN
Trigger: GTTCAGACTTCTGCTGATTCATAACCATTTGGCTCT...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGGGAGACCTTGGAGCCTaGAGTAGCCCAATACCTTTT +
Preference number: 4 (lower is better)
Translates to: RTMFKACTVDAYLMSFALGDLGA*SSPIPF
Trigger: AAAAGGTATTGGGCTACTTCAGGCTCCAAGGTCTCC...CAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672698.1
CDS-3UTR GCA 90 bp CCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGTGTCCCTTTGATATCTaGAGCAATGAAACCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PKRFLRPTNRHGSISPSGCPFDI*SNETQN
Trigger: ATTTTGGGTTTCATTGCTGCAGATATCAAAGGGACA...CCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp GATGAGTTCCGTTCTATGTCCTCCAACTTAGACTGTCTTTTGGTTCACAGAGTGTTAGACACTCATCACTaGTCCACCGGTTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: DEFRSMSSNLDCLLVHRVLDTHH*STGLGM
Trigger: CATTCCCAAACCGGTGGAGCAGTGATGAGTGTCTAA...CACTCTGTGAACCAAAAGACAGTCTAAGTTGGAGGACATAGAACGGAACTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTTTAGACACTCATCACTaGTCCACCGGTTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: QTEEYLLAFCRDAYFSSPLDTHH*STGLGM
Trigger: CATTCCCAAACCGGTGGAGCAGTGATGAGTGTCTAA...AGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGAGTTTTCCCATCTaGCTTAGACACTCATCACTG +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLMSFPI*LRHSSL
Trigger: CAGTGATGAGTGTCTAAGGCAGATGGGAAAACTCAT...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGATGAGTTTTCCCATCTaGCTTAGACACTCATCACTG +
Preference number: 4 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMMSFPI*LRHSSL
Trigger: CAGTGATGAGTGTCTAAGGCAGATGGGAAAACTCAT...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATTACCTGTTGGCTTTCTaGAGAGATGCTTACTTTTCC +
Preference number: 4 (lower is better)
Translates to: PTGKQDDVQGLYCGCLFDYLLAF*RDAYFS
Trigger: GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTA...ATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGTTATTTGATGTCTTTTaGTCTGCCCACAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: PKRFLRPTNRHGSISPSGLFDVF*SAHKQK
Trigger: CTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAA...CCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGGTTATCAAGGAAGTTTaGCCTTGTGTGCATAGAGAG +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLVIKEV*PCVHRE
Trigger: CTCTCTATGCACACAAGGGCAAACTTCCTTGATAAC...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440890.7
CDS-3UTR GCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGGGTGTTTGTACCCAGTaGATTCACATTACCATAGCG +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQGVCTQ*IHITIA
Trigger: CGCTATGGTAATGTGAATGCACTGGGTACAAACACC...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTGCAAAAGGCCACCTaGAGGAATTCCAAATGTGGT +
Preference number: 4 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLLQKAT*RNSKCG
Trigger: ACCACATTTGGAATTCCTGCAGGTGGCCTTTTGCAG...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp GTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTCATTTGTTCCATATTaGCTGAAGCTGCAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: VSPSYKQTWINLSFWELLSFVPY*LKLQKA
Trigger: GGCCTTTTGCAGCTTCAGGCAATATGGAACAAATGA...GAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGTGTGTTATAAAACACTaGCCCCTGGAGTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQCVIKH*PLEYSG
Trigger: CCCAGAATACTCCAGGGGGCAGTGTTTTATAACACA...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGATGACTTTTGAGCAGTaGTTTCCAGGAGGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQMTFEQ*FPGGQR
Trigger: CCTTTGACCTCCTGGAAAGCACTGCTCAAAAGTCAT...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440890.7
ENST00000515059.6
CDS-3UTR CCA 90 bp GACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCTGTACGCTTGATATATaGTTGCCAGGCTCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: DDVQGLYCGCLFDVFCSACTLDI*LPGSLG
Trigger: TCCTAGGGAGCCTGGCAACCATATATCAAGCGTACA...GGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264568.8
CDS-3UTR CCA 90 bp TATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCTCTGGACAATGGTGGTaGCATTTACAACGCAAGACC +
Preference number: 4 (lower is better)
Translates to: YLEQVTQAVSPSYKQTWISGQWW*HLQRKT
Trigger: GGTCTTGCGTTGTAAATGCCACCACCATTGTCCAGA...GATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTTCTTTGATGAGGAATaGGAGTGTCCCGACACTGAA +
Preference number: 4 (lower is better)
Translates to: CPQTEEYLLAFCRDAYFSFFDEE*ECPDTE
Trigger: TTCAGTGTCGGGACACTCCCATTCCTCATCAAAGAA...GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCATAAGAGGGGTCACTaGGCACTAGGTCATGATAAG +
Preference number: 4 (lower is better)
Translates to: PQTEEYLLAFCRDAYFSSHKRGH*ALGHDK
Trigger: CTTATCATGACCTAGTGCCCAGTGACCCCTCTTATG...AGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp GTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTCCTACAAACAGACATaGATCAATCTCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VSPSYKQTWINLSFWELLSYKQT*INLSFW
Trigger: CCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGA...GAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTGCCCATAACAGTTTGTaGCCTCTACTAACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PQTEEYLLAFCRDAYFSSAHNSL*PLLTVL
Trigger: GAGGACAGTTAGTAGAGGCCACAAACTGTTATGGGC...AGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGCATGACCCACTTAACTaGCATAAATGTTTACCTGTT +
Preference number: 4 (lower is better)
Translates to: PKRFLRPTNRHGSISPSGHDPLN*HKCLPV
Trigger: AACAGGTAAACATTTATGCCAGTTAAGTGGGTCATG...CCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR CAA 72 bp TGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTaGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: CLLLCPQTEEYL*AFCRDAYFSSP
Trigger: AGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCGCAAATATTGTTGACTaGGTCTTCTGGACAATGGTG +
Preference number: 4 (lower is better)
Translates to: CPQTEEYLLAFCRDAYFSANIVD*VFWTMV
Trigger: CACCATTGTCCAGAAGACTCAGTCAACAATATTTGC...GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGGCAAATATTGTTGACTaGGTCTTCTGGACAATGGTG +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQANIVD*VFWTMV
Trigger: CACCATTGTCCAGAAGACTCAGTCAACAATATTTGC...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTGCTGCAAATATTGTTaGCTGAGTCTTCTGGACAAT +
Preference number: 4 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMCCKYC*LSLLDN
Trigger: ATTGTCCAGAAGACTCAGTCAACAATATTTGCAGCA...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCCCTCTTCTATCATCGTaGAACAATATCCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: YLEQVTQAVSPSYKQTWIPLLSS*NNIRLC
Trigger: GCACAGACGGATATTGTTTCACGATGATAGAAGAGG...GATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATATCTGTTTCACCATCTaGATCTGCTTAGCTATAGTC +
Preference number: 4 (lower is better)
Translates to: PTGKQDDVQGLYCGCLFDICFTI*ICLAIV
Trigger: GACTATAGCTAAGCAGATTCAGATGGTGAAACAGAT...ATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCATCTGTTTCACCATCTaGATCTGCTTAGCTATAGTC +
Preference number: 4 (lower is better)
Translates to: SFALPTNRRVPVGFLQRCICFTI*ICLAIV
Trigger: GACTATAGCTAAGCAGATTCAGATGGTGAAACAGAT...GCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGAAATGACATAAGCCACTaGCAGAAGAGTAGGCTAACT +
Preference number: 4 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRNDISH*QKSRLT
Trigger: AGTTAGCCTACTCTTCTGTCAGTGGCTTATGTCATT...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCTTCCACTATACCTCCTaGTACACATCTCCTAGCAAC +
Preference number: 4 (lower is better)
Translates to: DDVQGLYCGCLFDVFCSAFHYTS*YTSPSN
Trigger: GTTGCTAGGAGATGTGTATCAGGAGGTATAGTGGAA...GGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTTTCCACTATACCTCCTaGTACACATCTCCTAGCAAC +
Preference number: 4 (lower is better)
Translates to: PQTEEYLLAFCRDAYFSSFHYTS*YTSPSN
Trigger: GTTGCTAGGAGATGTGTATCAGGAGGTATAGTGGAA...AGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTTTCCACTATACCTCCTaGTACACATCTCCTAGCAAC +
Preference number: 4 (lower is better)
Translates to: QTEEYLLAFCRDAYFSSPFHYTS*YTSPSN
Trigger: GTTGCTAGGAGATGTGTATCAGGAGGTATAGTGGAA...AGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACCCCAGCATTCTGTCATaGGTTTTCCCATCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: NMHHILNKLPKRFLRPTNPSILS*VFPSAL
Trigger: TAAGGCAGATGGGAAAACTCATGACAGAATGCTGGG...GTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCCCCAGCATTCTGTCATaGGTTTTCCCATCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: KQDDVQGLYCGCLFDVFCPSILS*VFPSAL
Trigger: TAAGGCAGATGGGAAAACTCATGACAGAATGCTGGG...GCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAATGTCCTGGGACTCTaGCATTTTGGCAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQNVLGL*HFGKCF
Trigger: AAAACACTTGCCAAAATGTCAGAGTCCCAGGACATT...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTGTGGATGCTTATTTaGTGTCTTTTGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLLWMLI*CLLLCP
Trigger: TGGGCAGAGCAAAAGACATCAAATAAGCATCCACAG...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGACATGCATCATATCTTaGACAAGTTACCCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQTCIIS*TSYPSG
Trigger: ACCGCTTGGGTAACTTGTTCAAGATATGATGCATGT...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGGTAGTTAAATTAGCCTaGCGGATGTTTCCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLVVKLA*RMFPLY
Trigger: ATAGAGAGGAAACATCCGTCAGGCTAATTTAACTAC...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTGTAGTTAAATTAGCCTaGCGGATGTTTCCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: PSYKQTWINLSFWELLCLVVKLA*RMFPLY
Trigger: ATAGAGAGGAAACATCCGTCAGGCTAATTTAACTAC...AAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGTATTGGCCTTCTCGATaGTTTTATTCATGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLYWPSR*FYSCCS
Trigger: GGAGCAACATGAATAAAATCATCGAGAAGGCCAATA...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTCTTCAAGGCTCAGATaGTTAGTCACACTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: VSPSYKQTWINLSFWELLSSRLR*LVTLSS
Trigger: AGAACTAAGTGTGACTAATCATCTGAGCCTTGAAGA...GAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGAATGAGTTTTCCCATCTaGCTTAGACACTCATCACTG +
Preference number: 4 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRMSFPI*LRHSSL
Trigger: CAGTGATGAGTGTCTAAGGCAGATGGGAAAACTCAT...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGATGAGTTTTCCCATCTaGCTTAGACACTCATCACTG +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQMSFPI*LRHSSL
Trigger: CAGTGATGAGTGTCTAAGGCAGATGGGAAAACTCAT...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTACCTGTTGGCTTTCTaGAGAGATGCTTACTTTTCC +
Preference number: 4 (lower is better)
Translates to: CPQTEEYLLAFCRDAYFSYLLAF*RDAYFS
Trigger: GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTA...GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp GACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCGGTGTTTGTACCCAGTaGATTCACATTACCATAGCG +
Preference number: 4 (lower is better)
Translates to: DDVQGLYCGCLFDVFCSAGVCTQ*IHITIA
Trigger: CGCTATGGTAATGTGAATGCACTGGGTACAAACACC...GGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTGAGAGATCAAAAGCATaGACAGGTCAATCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QTEEYLLAFCRDAYFSSPERSKA*TGQSSA
Trigger: TGCAGAGGATTGACCTGTGCATGCTTTTGATCTCTC...AGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp ATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAAAGATACAAGCCATCTaGACGATCACCCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: ILNKLPKRFLRPTNRHGSKIQAI*TITLIS
Trigger: GGAAATGAGGGTGATCGTGCAGATGGCTTGTATCTT...TGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCTGTGTTATAAAACACTaGCCCCTGGAGTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLCVIKH*PLEYSG
Trigger: CCCAGAATACTCCAGGGGGCAGTGTTTTATAACACA...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATGAACAAGTTACCAGCTaGAAACCGACTTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LEQVTQAVSPSYKQTWINEQVTS*KPTSEV
Trigger: CACTTCTGAAGTCGGTTTGCAGCTGGTAACTTGTTC...ATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp GACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCGCAAAATTATTTTCCTaGTCCACCACCAAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: DDVQGLYCGCLFDVFCSAAKLFS*STTKAH
Trigger: GTGGGCTTTGGTGGTGGAGCAGGAAAATAATTTTGC...GGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672698.1
CDS-3UTR CCA 90 bp ATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCATCTTCTGGACAATGGTaGTGGCATTTACAACGCAAG +
Preference number: 4 (lower is better)
Translates to: ILNKLPKRFLRPTNRHGSSSGQW*WHLQRK
Trigger: CTTGCGTTGTAAATGCCACCACCATTGTCCAGAAGA...TGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATAAGTAAAGCCCTGTaGTGTATAGGTCCATCAACA +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLISKAL*CIGPST
Trigger: TGTTGATGGACCTATACACCACAGGGCTTTACTTAT...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp GTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCATAAGTAAAGCCCTGTaGTGTATAGGTCCATCAACA +
Preference number: 4 (lower is better)
Translates to: VSPSYKQTWINLSFWELLISKAL*CIGPST
Trigger: TGTTGATGGACCTATACACCACAGGGCTTTACTTAT...GAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp GATGAGTTCCGTTCTATGTCCTCCAACTTAGACTGTCTTTTGGTTCACAGAGTGCTTTTCAGATCTCGATaGGCAATTGCTGGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: DEFRSMSSNLDCLLVHRVLFRSR*AIAGLP
Trigger: AGGCAAACCAGCAATTGCCCATCGAGATCTGAAAAG...CACTCTGTGAACCAAAAGACAGTCTAAGTTGGAGGACATAGAACGGAACTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTCTTTTCAGATCTCGATaGGCAATTGCTGGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: QTEEYLLAFCRDAYFSSPLFRSR*AIAGLP
Trigger: AGGCAAACCAGCAATTGCCCATCGAGATCTGAAAAG...AGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTTTTCAGATCTCGATaGGCAATTGCTGGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLLFRSR*AIAGLP
Trigger: AGGCAAACCAGCAATTGCCCATCGAGATCTGAAAAG...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACCATAAGAGGGGTCACTaGGCACTAGGTCATGATAAG +
Preference number: 4 (lower is better)
Translates to: NMHHILNKLPKRFLRPTNHKRGH*ALGHDK
Trigger: CTTATCATGACCTAGTGCCCAGTGACCCCTCTTATG...GTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCATCAATCTCTCCTTCTaGGAGCTTCTCTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLINLSF*ELLCLC
Trigger: GCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGAT...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTATCAATCTCTCCTTCTaGGAGCTTCTCTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QTEEYLLAFCRDAYFSSPINLSF*ELLCLC
Trigger: GCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGAT...AGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGGCCCATAACAGTTTGTaGCCTCTACTAACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RTMFKACTVDAYLMSFALAHNSL*PLLTVL
Trigger: GAGGACAGTTAGTAGAGGCCACAAACTGTTATGGGC...CAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp GCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTGCAGCTATGAAGCACTaGGAAGTAAATGCAAAATAT +
Preference number: 4 (lower is better)
Translates to: AVSPSYKQTWINLSFWELAAMKH*EVNAKY
Trigger: ATATTTTGCATTTACTTCCCAGTGCTTCATAGCTGC...AAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CAAAAGGCCACCTGCAGGAATTCCAAATGTGGTCCTAGACAGGCGGTGTTTGTACTGAACCTTAAATCTTaGGCCCTTACTACTATATCT +
Preference number: 4 (lower is better)
Translates to: QKATCRNSKCGPRQAVFVLNLKS*ALTTIS
Trigger: AGATATAGTAGTAAGGGCCCAAGATTTAAGGTTCAG...TACAAACACCGCCTGTCTAGGACCACATTTGGAATTCCTGCAGGTGGCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672698.1
CDS-3UTR TCA 90 bp GACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCGCAAATATTGTTGACTaGGTCTTCTGGACAATGGTG +
Preference number: 4 (lower is better)
Translates to: DDVQGLYCGCLFDVFCSAANIVD*VFWTMV
Trigger: CACCATTGTCCAGAAGACTCAGTCAACAATATTTGC...GGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GATGAGTTCCGTTCTATGTCCTCCAACTTAGACTGTCTTTTGGTTCACAGAGTGGCAAATATTGTTGACTaGGTCTTCTGGACAATGGTG +
Preference number: 4 (lower is better)
Translates to: DEFRSMSSNLDCLLVHRVANIVD*VFWTMV
Trigger: CACCATTGTCCAGAAGACTCAGTCAACAATATTTGC...CACTCTGTGAACCAAAAGACAGTCTAAGTTGGAGGACATAGAACGGAACTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGTGCTGCAAATATTGTTaGCTGAGTCTTCTGGACAAT +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQCCKYC*LSLLDN
Trigger: ATTGTCCAGAAGACTCAGTCAACAATATTTGCAGCA...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCCCTCTTCTATCATCGTaGAACAATATCCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: KQDDVQGLYCGCLFDVFCPLLSS*NNIRLC
Trigger: GCACAGACGGATATTGTTTCACGATGATAGAAGAGG...GCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATAATGACATAAGCCACTaGCAGAAGAGTAGGCTAACT +
Preference number: 4 (lower is better)
Translates to: LEQVTQAVSPSYKQTWINNDISH*QKSRLT
Trigger: AGTTAGCCTACTCTTCTGTCAGTGGCTTATGTCATT...ATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTATTTCTGTGTGTAAATaGCATAAGCCACTGACAGAA +
Preference number: 4 (lower is better)
Translates to: KQTWINLSFWELLCLCPGISVCK*HKPLTE
Trigger: TTCTGTCAGTGGCTTATGTCATTTACACACAGAAAT...ACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTAATGTCCTGGGACTCTaGCATTTTGGCAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: ESNMHHILNKLPKRFLRPNVLGL*HFGKCF
Trigger: AAAACACTTGCCAAAATGTCAGAGTCCCAGGACATT...AGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACAATGTCCTGGGACTCTaGCATTTTGGCAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHNVLGL*HFGKCF
Trigger: AAAACACTTGCCAAAATGTCAGAGTCCCAGGACATT...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACACTGTGGATGCTTATTTaGTGTCTTTTGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: MFKACTVDAYLMSFALPTLWMLI*CLLLCP
Trigger: TGGGCAGAGCAAAAGACATCAAATAAGCATCCACAG...TGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACACATGCATCATATCTTaGACAAGTTACCCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: KQHASYLEQVTQAVSPSYTCIIS*TSYPSG
Trigger: ACCGCTTGGGTAACTTGTTCAAGATATGATGCATGT...GTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTACATGCATCATATCTTaGACAAGTTACCCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: QTEEYLLAFCRDAYFSSPTCIIS*TSYPSG
Trigger: ACCGCTTGGGTAACTTGTTCAAGATATGATGCATGT...AGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCGGAGTATGTTTAAGATaGGTTCCGTTCTATGTCCTC +
Preference number: 4 (lower is better)
Translates to: YLEQVTQAVSPSYKQTWIGVCLR*VPFYVL
Trigger: GAGGACATAGAACGGAACTCATCTTAAACATACTCC...GATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACGGAGTATGTTTAAGATaGGTTCCGTTCTATGTCCTC +
Preference number: 4 (lower is better)
Translates to: KQHASYLEQVTQAVSPSYGVCLR*VPFYVL
Trigger: GAGGACATAGAACGGAACTCATCTTAAACATACTCC...GTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGAAAAGGGTTTTACCATaGAAGAGATGCCTAACTCAA +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLKRVLP*KRCLTQ
Trigger: TTGAGTTAGGCATCTCTTTCATGGTAAAACCCTTTT...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATTTTCTTTGTGCTTCTaGGATTGGCTCCTTTGCATA +
Preference number: 4 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRFSLCF*DWLLCI
Trigger: TATGCAAAGGAGCCAATCTCAGAAGCACAAAGAAAA...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCGGCATTCCTAAGATGTaGAATGATCACCTAAGATAT +
Preference number: 4 (lower is better)
Translates to: PTNRHGSISPSGSFSVFAGIPKM*NDHLRY
Trigger: ATATCTTAGGTGATCATTTCACATCTTAGGAATGCC...GGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTATTGAAGCAGCGTTCTaGTTACAGTTCTACTTGTTT +
Preference number: 4 (lower is better)
Translates to: PSYKQTWINLSFWELLCLIEAAF*LQFYLF
Trigger: AAACAAGTAGAACTGTAATCAGAACGCTGCTTCAAT...AAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAGAGCCAAATGGTTATaGATCAGCAGAAGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: YLEQVTQAVSPSYKQTWIRAKWL*ISRSLN
Trigger: GTTCAGACTTCTGCTGATTCATAACCATTTGGCTCT...GATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp GATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATTCGTTCCTTTCTGTaGAGCATTCAATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: DVFCSAHKQKSTCWLSAEIRSFL*SIQLIF
Trigger: GAAGATCAATTGAATGCTGCACAGAAAGGAACGAAT...CTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATTCGTTCCTTTCTGTaGAGCATTCAATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLIRSFL*SIQLIF
Trigger: GAAGATCAATTGAATGCTGCACAGAAAGGAACGAAT...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTATTCGTTCCTTTCTGTaGAGCATTCAATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: SVLQTDMDQSLLLGASLSIRSFL*SIQLIF
Trigger: GAAGATCAATTGAATGCTGCACAGAAAGGAACGAAT...AGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp ATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACACCTGTTCTAACCCAATaGTGTATCGAGGTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: MFKACTVDAYLMSFALPTPVLTQ*CIEVWF
Trigger: AAACCAGACCTCGATACAGCATTGGGTTAGAACAGG...TGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp GATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGTGTCCCTTTGATATCTaGAGCAATGAAACCCAAAAT +
Preference number: 4 (lower is better)
Translates to: DVFCSAHKQKSTCWLSAECPFDI*SNETQN
Trigger: ATTTTGGGTTTCATTGCTGCAGATATCAAAGGGACA...CTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCTGTCCCTTTGATATCTaGAGCAATGAAACCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PTNRHGSISPSGSFSVFACPFDI*SNETQN
Trigger: ATTTTGGGTTTCATTGCTGCAGATATCAAAGGGACA...GGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTTACCTGTTGGCTTTCTaGAGAGATGCTTACTTTTCC +
Preference number: 4 (lower is better)
Translates to: QTEEYLLAFCRDAYFSSPYLLAF*RDAYFS
Trigger: GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTA...AGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACTACCTGTTGGCTTTCTaGAGAGATGCTTACTTTTCC +
Preference number: 4 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHYLLAF*RDAYFS
Trigger: GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTA...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATTTATTTGATGTCTTTTaGTCTGCCCACAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: PTGKQDDVQGLYCGCLFDLFDVF*SAHKQK
Trigger: CTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAA...ATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTTTATTTGATGTCTTTTaGTCTGCCCACAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: KQTWINLSFWELLCLCPGLFDVF*SAHKQK
Trigger: CTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAA...ACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGAGGCTTGTACTGTGGATaGTTATTTGATGTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRGLYCG*LFDVFC
Trigger: GCAAAAGACATCAAATAAGCATCCACAGTACAAGCC...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGGGCTTGTACTGTGGATaGTTATTTGATGTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQGLYCG*LFDVFC
Trigger: GCAAAAGACATCAAATAAGCATCCACAGTACAAGCC...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CTAACTCAATCAGAAACAGAAGTGGATCTGAAGAACACCTATCAACAATTACTTGAGCTTCTCTGTCTTTaGCCAGGTCGCTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LTQSETEVDLKNTYQQLLELLCL*PGRSLR
Trigger: TCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTC...AAGTAATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTTCTGATTGAGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTTCATTTGTTCCATATTaGCTGAAGCTGCAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: PQTEEYLLAFCRDAYFSSSFVPY*LKLQKA
Trigger: GGCCTTTTGCAGCTTCAGGCAATATGGAACAAATGA...AGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCGAACAAGTTACCAGCTaGAAACCGACTTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: KQDDVQGLYCGCLFDVFCEQVTS*KPTSEV
Trigger: CACTTCTGAAGTCGGTTTGCAGCTGGTAACTTGTTC...GCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTGAACAAGTTACCAGCTaGAAACCGACTTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SRTMFKACTVDAYLMSFAEQVTS*KPTSEV
Trigger: CACTTCTGAAGTCGGTTTGCAGCTGGTAACTTGTTC...AGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TTTCTTAGAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTGTGATTAGGTACAACTaGGTCCAGGACCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: FLRKQHASYLEQVTQAVSVIRYN*VQDPVP
Trigger: AGGGACAGGGTCCTGGACCCAGTTGTACCTAATCAC...AGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCTTTTCAGATCTCGATaGGCAATTGCTGGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: RTMFKACTVDAYLMSFALLFRSR*AIAGLP
Trigger: AGGCAAACCAGCAATTGCCCATCGAGATCTGAAAAG...CAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGAACTCGAGTGTTAGGTaGTATGTCAACTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMNSSVR*YVNFIC
Trigger: ACAAATGAAGTTGACATACCACCTAACACTCGAGTT...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGAACTCGAGTGTTAGGTaGTATGTCAACTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLNSSVR*YVNFIC
Trigger: ACAAATGAAGTTGACATACCACCTAACACTCGAGTT...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp GTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCAACTCGAGTGTTAGGTaGTATGTCAACTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: VSPSYKQTWINLSFWELLNSSVR*YVNFIC
Trigger: ACAAATGAAGTTGACATACCACCTAACACTCGAGTT...GAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCAGAAGAGTACCTGTTaGCTTTCTGCAGAGATGCTT +
Preference number: 4 (lower is better)
Translates to: SRTMFKACTVDAYLMSFAQKSTC*LSAEML
Trigger: AAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTG...AGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp ATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCATCCTACAAACAGACATaGATCAATCTCTCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ILNKLPKRFLRPTNRHGSSYKQT*INLSFW
Trigger: CCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGA...TGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTCCAGCAGAGTTCCTaGGAAGAATTTTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: SFALPTNRRVPVGFLQRCFQQSS*EEFCCY
Trigger: ATAACAACAAAATTCTTCCCAGGAACTCTGCTGGAA...GCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp GAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTAGTGAAGTGGTTTCCTaGCTATATCTTGGGCTATGT +
Preference number: 4 (lower is better)
Translates to: ESNMHHILNKLPKRFLRPSEVVS*LYLGLC
Trigger: ACATAGCCCAAGATATAGCCAGGAAACCACTTCACT...AGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672698.1
3UTR CAA 72 bp AGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTaGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: RTMFKACTVDAY*MSFALPTNRRV
Trigger: TACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR CAA 72 bp TACAGGGCTTTCTTAGAAAGCAACATGCATCATATCTaGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACA +
Preference number: 4 (lower is better)
Translates to: YRAFLESNMHHI*NKLPKRFLRPT
Trigger: TGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAAGCCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCTGCTGCAAATATTGTTaGCTGAGTCTTCTGGACAAT +
Preference number: 4 (lower is better)
Translates to: YLEQVTQAVSPSYKQTWICCKYC*LSLLDN
Trigger: ATTGTCCAGAAGACTCAGTCAACAATATTTGCAGCA...GATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTTGCTGCAAATATTGTTaGCTGAGTCTTCTGGACAAT +
Preference number: 4 (lower is better)
Translates to: PQTEEYLLAFCRDAYFSSCCKYC*LSLLDN
Trigger: ATTGTCCAGAAGACTCAGTCAACAATATTTGCAGCA...AGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGATTTCTGTGTGTAAATaGCATAAGCCACTGACAGAA +
Preference number: 4 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQISVCK*HKPLTE
Trigger: TTCTGTCAGTGGCTTATGTCATTTACACACAGAAAT...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TTTCTTAGAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTAGGGGCGTAACTTCTTaGTGCACACAATCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: FLRKQHASYLEQVTQAVSRGVTS*CTQSPS
Trigger: TGAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCT...AGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACAAATGTCCTGGGACTCTaGCATTTTGGCAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: MFKACTVDAYLMSFALPTNVLGL*HFGKCF
Trigger: AAAACACTTGCCAAAATGTCAGAGTCCCAGGACATT...TGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGAAAACAGAAGTGGATCTaGAGAACACCTATCAACAAT +
Preference number: 4 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRKQKWI*RTPINN
Trigger: ATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTT...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGAAAAAGGGTTTTACCATaGAAGAGATGCCTAACTCAA +
Preference number: 4 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRKRVLP*KRCLTQ
Trigger: TTGAGTTAGGCATCTCTTTCATGGTAAAACCCTTTT...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTTTTTCTTTGTGCTTCTaGGATTGGCTCCTTTGCATA +
Preference number: 4 (lower is better)
Translates to: PQTEEYLLAFCRDAYFSSFSLCF*DWLLCI
Trigger: TATGCAAAGGAGCCAATCTCAGAAGCACAAAGAAAA...AGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTGTAGTTAAATTAGCCTaGCGGATGTTTCCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: ESNMHHILNKLPKRFLRPVVKLA*RMFPLY
Trigger: ATAGAGAGGAAACATCCGTCAGGCTAATTTAACTAC...AGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACTATTGGCCTTCTCGATaGTTTTATTCATGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: KQHASYLEQVTQAVSPSYYWPSR*FYSCCS
Trigger: GGAGCAACATGAATAAAATCATCGAGAAGGCCAATA...GTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACAACCGACTTCAGAAGTaGGGAAAATGTTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHNRLQK*GKCFLM
Trigger: CATGAGAAAACATTTTCCTCACTTCTGAAGTCGGTT...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTAGAATGTTTTCTGGATaGACAAGTTACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: QTEEYLLAFCRDAYFSSPRMFSG*TSYQLQ
Trigger: TTGCAGCTGGTAACTTGTTCATCCAGAAAACATTCT...AGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCATTGAAGCAGCGTTCTaGTTACAGTTCTACTTGTTT +
Preference number: 4 (lower is better)
Translates to: CPQTEEYLLAFCRDAYFSIEAAF*LQFYLF
Trigger: AAACAAGTAGAACTGTAATCAGAACGCTGCTTCAAT...GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTGTCCCTTTGATATCTaGAGCAATGAAACCCAAAAT +
Preference number: 4 (lower is better)
Translates to: CPQTEEYLLAFCRDAYFSCPFDI*SNETQN
Trigger: ATTTTGGGTTTCATTGCTGCAGATATCAAAGGGACA...GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp TATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCGGCTTGTACTGTGGATaGTTATTTGATGTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: YLEQVTQAVSPSYKQTWIGLYCG*LFDVFC
Trigger: GCAAAAGACATCAAATAAGCATCCACAGTACAAGCC...GATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATCACTTATGGCAGGCTTaGTTGTTTAACTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PTGKQDDVQGLYCGCLFDHLWQA*LFNFLF
Trigger: AAACAAAAAGTTAAACAAGCAAGCCTGCCATAAGTG...ATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGCACTTATGGCAGGCTTaGTTGTTTAACTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLHLWQA*LFNFLF
Trigger: AAACAAAAAGTTAAACAAGCAAGCCTGCCATAAGTG...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCATAAGTAAAGCCCTGTaGTGTATAGGTCCATCAACA +
Preference number: 4 (lower is better)
Translates to: YLEQVTQAVSPSYKQTWIISKAL*CIGPST
Trigger: TGTTGATGGACCTATACACCACAGGGCTTTACTTAT...GATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCAACTCGAGTGTTAGGTaGTATGTCAACTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: CPQTEEYLLAFCRDAYFSNSSVR*YVNFIC
Trigger: ACAAATGAAGTTGACATACCACCTAACACTCGAGTT...GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCCATGACCCACTTAACTaGCATAAATGTTTACCTGTT +
Preference number: 4 (lower is better)
Translates to: CPQTEEYLLAFCRDAYFSHDPLN*HKCLPV
Trigger: AACAGGTAAACATTTATGCCAGTTAAGTGGGTCATG...GGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGACATGACCCACTTAACTaGCATAAATGTTTACCTGTT +
Preference number: 4 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRHDPLN*HKCLPV
Trigger: AACAGGTAAACATTTATGCCAGTTAAGTGGGTCATG...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACAAATCTGTAAGGCACTaGTTCCCCCAAAAGAACAAA +
Preference number: 4 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHKSVRH*FPQKNK
Trigger: TTTGTTCTTTTGGGGGAACCAGTGCCTTACAGATTT...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440890.7
ENST00000515059.6
3UTR CAA 72 bp ACAAGCCATCTGCACGATCACCCTCATTTCCTATCTTaGTTGACATGTTCCTCTTACAACACAAGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: TSHLHDHPHFLS*LTCSSYNTRAN
Trigger: ATTTGCTCTTGTGTTGTAAGAGGAACATGTCAACAAAGATAGGAAATGAGGGTGATCGTGCAGATGGCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACATCTGTTTCACCATCTaGATCTGCTTAGCTATAGTC +
Preference number: 4 (lower is better)
Translates to: NMHHILNKLPKRFLRPTNICFTI*ICLAIV
Trigger: GACTATAGCTAAGCAGATTCAGATGGTGAAACAGAT...GTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCATTTCTGTGTGTAAATaGCATAAGCCACTGACAGAA +
Preference number: 4 (lower is better)
Translates to: DDVQGLYCGCLFDVFCSAISVCK*HKPLTE
Trigger: TTCTGTCAGTGGCTTATGTCATTTACACACAGAAAT...GGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TTTCTTAGAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCCAGCATTCTGTCATaGGTTTTCCCATCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: FLRKQHASYLEQVTQAVSPSILS*VFPSAL
Trigger: TAAGGCAGATGGGAAAACTCATGACAGAATGCTGGG...AGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAAACAGAAGTGGATCTaGAGAACACCTATCAACAAT +
Preference number: 4 (lower is better)
Translates to: YLEQVTQAVSPSYKQTWIKQKWI*RTPINN
Trigger: ATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTT...GATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACAAAAGGGTTTTACCATaGAAGAGATGCCTAACTCAA +
Preference number: 4 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHKRVLP*KRCLTQ
Trigger: TTGAGTTAGGCATCTCTTTCATGGTAAAACCCTTTT...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp TATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCGGCATTCCTAAGATGTaGAATGATCACCTAAGATAT +
Preference number: 4 (lower is better)
Translates to: YLEQVTQAVSPSYKQTWIGIPKM*NDHLRY
Trigger: ATATCTTAGGTGATCATTTCACATCTTAGGAATGCC...GATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTTATTGGCCTTCTCGATaGTTTTATTCATGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SRTMFKACTVDAYLMSFAYWPSR*FYSCCS
Trigger: GGAGCAACATGAATAAAATCATCGAGAAGGCCAATA...AGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTAACCGACTTCAGAAGTaGGGAAAATGTTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: SRTMFKACTVDAYLMSFANRLQK*GKCFLM
Trigger: CATGAGAAAACATTTTCCTCACTTCTGAAGTCGGTT...AGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp ATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACATCTTCAAGGCTCAGATaGTTAGTCACACTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: MFKACTVDAYLMSFALPTSSRLR*LVTLSS
Trigger: AGAACTAAGTGTGACTAATCATCTGAGCCTTGAAGA...TGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCCTCACAAAATATTCTaGTTTGACGTTATCCACGTT +
Preference number: 4 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLPHKIF*FDVIHV
Trigger: AACGTGGATAACGTCAAATCAGAATATTTTGTGAGG...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp AAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACCCTCACAAAATATTCTaGTTTGACGTTATCCACGTT +
Preference number: 4 (lower is better)
Translates to: KQHASYLEQVTQAVSPSYPHKIF*FDVIHV
Trigger: AACGTGGATAACGTCAAATCAGAATATTTTGTGAGG...GTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTCACAAAATATTCTaGTTTGACGTTATCCACGTT +
Preference number: 4 (lower is better)
Translates to: PQTEEYLLAFCRDAYFSSPHKIF*FDVIHV
Trigger: AACGTGGATAACGTCAAATCAGAATATTTTGTGAGG...AGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp GAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACTCTTCTTAGTCTTTaGAATAGTCCTGACAGTAAG +
Preference number: 4 (lower is better)
Translates to: ESNMHHILNKLPKRFLRPTLLSL*NSPDSK
Trigger: CTTACTGTCAGGACTATTTCAAAGACTAAGAAGAGT...AGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440890.7
ENST00000515059.6
CDS-3UTR TCA 90 bp GATGAGTTCCGTTCTATGTCCTCCAACTTAGACTGTCTTTTGGTTCACAGAGTGACTCTTCTTAGTCTTTaGAATAGTCCTGACAGTAAG +
Preference number: 4 (lower is better)
Translates to: DEFRSMSSNLDCLLVHRVTLLSL*NSPDSK
Trigger: CTTACTGTCAGGACTATTTCAAAGACTAAGAAGAGT...CACTCTGTGAACCAAAAGACAGTCTAAGTTGGAGGACATAGAACGGAACTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440890.7
ENST00000515059.6
CDS-3UTR GCA 90 bp ATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATTCGTTCCTTTCTGTaGAGCATTCAATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: ILNKLPKRFLRPTNRHGSIRSFL*SIQLIF
Trigger: GAAGATCAATTGAATGCTGCACAGAAAGGAACGAAT...TGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp GAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTATTCGTTCCTTTCTGTaGAGCATTCAATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: ESNMHHILNKLPKRFLRPIRSFL*SIQLIF
Trigger: GAAGATCAATTGAATGCTGCACAGAAAGGAACGAAT...AGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTTGTCCCTTTGATATCTaGAGCAATGAAACCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PQTEEYLLAFCRDAYFSSCPFDI*SNETQN
Trigger: ATTTTGGGTTTCATTGCTGCAGATATCAAAGGGACA...AGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCTTATTTGATGTCTTTTaGTCTGCCCACAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLLFDVF*SAHKQK
Trigger: CTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAA...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp AGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGGGCTTGTACTGTGGATaGTTATTTGATGTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: RTMFKACTVDAYLMSFALGLYCG*LFDVFC
Trigger: GCAAAAGACATCAAATAAGCATCCACAGTACAAGCC...CAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACAACTCGAGTGTTAGGTaGTATGTCAACTTCATTTGT +
Preference number: 4 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHNSSVR*YVNFIC
Trigger: ACAAATGAAGTTGACATACCACCTAACACTCGAGTT...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTGCAGCTATGAAGCACTaGGAAGTAAATGCAAAATAT +
Preference number: 4 (lower is better)
Translates to: PQTEEYLLAFCRDAYFSSAAMKH*EVNAKY
Trigger: ATATTTTGCATTTACTTCCCAGTGCTTCATAGCTGC...AGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TTTCTTAGAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCTTCCCATCCTTCATTaGAACCAACACCTCCCTAGA +
Preference number: 4 (lower is better)
Translates to: FLRKQHASYLEQVTQAVSLPILH*NQHLPR
Trigger: TCTAGGGAGGTGTTGGTTCCAATGAAGGATGGGAAG...AGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCAAATCTGTAAGGCACTaGTTCCCCCAAAAGAACAAA +
Preference number: 4 (lower is better)
Translates to: KQDDVQGLYCGCLFDVFCKSVRH*FPQKNK
Trigger: TTTGTTCTTTTGGGGGAACCAGTGCCTTACAGATTT...GCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440890.7
ENST00000515059.6
CDS-3UTR TCA 90 bp AGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGATTTCTGTGTGTAAATaGCATAAGCCACTGACAGAA +
Preference number: 4 (lower is better)
Translates to: RTMFKACTVDAYLMSFALISVCK*HKPLTE
Trigger: TTCTGTCAGTGGCTTATGTCATTTACACACAGAAAT...CAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp ATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACATTATTTGATGTCTTTTaGTCTGCCCACAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: MFKACTVDAYLMSFALPTLFDVF*SAHKQK
Trigger: CTTCTGTTTGTGGGCAGAGCAAAAGACATCAAATAA...TGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TTTCTTAGAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTTTCTTTGATGAGGAATaGGAGTGTCCCGACACTGAA +
Preference number: 4 (lower is better)
Translates to: FLRKQHASYLEQVTQAVSFFDEE*ECPDTE
Trigger: TTCAGTGTCGGGACACTCCCATTCCTCATCAAAGAA...AGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CTAACTCAATCAGAAACAGAAGTGGATCTGAAGAACACCTATCAACAATTACTTCATAAGAGGGGTCACTaGGCACTAGGTCATGATAAG +
Preference number: 4 (lower is better)
Translates to: LTQSETEVDLKNTYQQLLHKRGH*ALGHDK
Trigger: CTTATCATGACCTAGTGCCCAGTGACCCCTCTTATG...AAGTAATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTTCTGATTGAGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp TTTCTTAGAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTATCAATCTCTCCTTCTaGGAGCTTCTCTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: FLRKQHASYLEQVTQAVSINLSF*ELLCLC
Trigger: GCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGAT...AGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp AAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTTCCAGCAGAGTTCCTaGGAAGAATTTTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: KQDDVQGLYCGCLFDVFCFQQSS*EEFCCY
Trigger: ATAACAACAAAATTCTTCCCAGGAACTCTGCTGGAA...GCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp ATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACATTACAGTTAGTGAAGTaGTTTCCTGGCTATATCTTG +
Preference number: 4 (lower is better)
Translates to: MFKACTVDAYLMSFALPTLQLVK*FPGYIL
Trigger: CAAGATATAGCCAGGAAACCACTTCACTAACTGTAA...TGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672698.1
3UTR CAA 72 bp GAGTTCCGTTCTATGTCCTCCAACTTAGACTGTCTTTaGGTTCACAGAGTGCAACAATATTTTACCAATGGA +
Preference number: 4 (lower is better)
Translates to: EFRSMSSNLDCL*VHRVQQYFTNG
Trigger: TCCATTGGTAAAATATTGTTGCACTCTGTGAACCAAAAGACAGTCTAAGTTGGAGGACATAGAACGGAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CTAACTCAATCAGAAACAGAAGTGGATCTGAAGAACACCTATCAACAATTACTTTGTGTTATAAAACACTaGCCCCTGGAGTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: LTQSETEVDLKNTYQQLLCVIKH*PLEYSG
Trigger: CCCAGAATACTCCAGGGGGCAGTGTTTTATAACACA...AAGTAATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTTCTGATTGAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CTAACTCAATCAGAAACAGAAGTGGATCTGAAGAACACCTATCAACAATTACTTCTATACTTCTCTCAGTaGCGTTCCACCCACAAACAA +
Preference number: 4 (lower is better)
Translates to: LTQSETEVDLKNTYQQLLLYFSQ*RSTHKQ
Trigger: TTGTTTGTGGGTGGAACGGCACTGAGAGAAGTATAG...AAGTAATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTTCTGATTGAGTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440890.7
ENST00000515059.6
CDS-3UTR TCA 90 bp TTTCTTAGAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTAGAATGTTTTCTGGATaGACAAGTTACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: FLRKQHASYLEQVTQAVSRMFSG*TSYQLQ
Trigger: TTGCAGCTGGTAACTTGTTCATCCAGAAAACATTCT...AGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR GCA 90 bp CTAACTCAATCAGAAACAGAAGTGGATCTGAAGAACACCTATCAACAATTACTTGGCTTGTACTGTGGATaGTTATTTGATGTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LTQSETEVDLKNTYQQLLGLYCG*LFDVFC
Trigger: GCAAAAGACATCAAATAAGCATCCACAGTACAAGCC...AAGTAATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTTCTGATTGAGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CTAACTCAATCAGAAACAGAAGTGGATCTGAAGAACACCTATCAACAATTACTTGGCATTCCTAAGATGTaGAATGATCACCTAAGATAT +
Preference number: 4 (lower is better)
Translates to: LTQSETEVDLKNTYQQLLGIPKM*NDHLRY
Trigger: ATATCTTAGGTGATCATTTCACATCTTAGGAATGCC...AAGTAATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTTCTGATTGAGTTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR TCA 90 bp CTAACTCAATCAGAAACAGAAGTGGATCTGAAGAACACCTATCAACAATTACTTATTGAAGCAGCGTTCTaGTTACAGTTCTACTTGTTT +
Preference number: 4 (lower is better)
Translates to: LTQSETEVDLKNTYQQLLIEAAF*LQFYLF
Trigger: AAACAAGTAGAACTGTAATCAGAACGCTGCTTCAAT...AAGTAATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTTCTGATTGAGTTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CCA 90 bp CTAACTCAATCAGAAACAGAAGTGGATCTGAAGAACACCTATCAACAATTACTTGCAGCTATGAAGCACTaGGAAGTAAATGCAAAATAT +
Preference number: 4 (lower is better)
Translates to: LTQSETEVDLKNTYQQLLAAMKH*EVNAKY
Trigger: ATATTTTGCATTTACTTCCCAGTGCTTCATAGCTGC...AAGTAATTGTTGATAGGTGTTCTTCAGATCCACTTCTGTTTCTGATTGAGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
3UTR CAA 72 bp ACACAGCTCATGACAATTTTATTTAATATTGATCCTTaGAATGAGAGATCAAAAGCATGCACAGGTCAATCC +
Preference number: 4 (lower is better)
Translates to: TQLMTILFNIDP*NERSKACTGQS
Trigger: GGATTGACCTGTGCATGCTTTTGATCTCTCATTCAAAGGATCAATATTAAATAAAATTGTCATGAGCTGTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp TCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAGGTCGGAGCTTCTCTGTCTTaGCCCAGGTCGCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: SFWELLCLCPGRSLRGEVGASLS*PRSLPE
Trigger: CTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCC...GACCTCACCTCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ACAGGCGGTGTTTGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATGCACTTAGCTATAGTCCTTaGGACCAGCAGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: TGGVCTQCIHITIAAPNALSYSP*DQQREA
Trigger: GGCCTCCCTCTGCTGGTCCAAAGGACTATAGCTAAG...TGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGGCAGGGCTGTCAGCCTaGATGCAGGATTGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: DVFCSAHKQKSTCWLSAEAGLSA*MQDCEP
Trigger: GGGCTCACAATCCTGCATCAAGGCTGACAGCCCTGC...CTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGGCAGGGCTGTCAGCCTaGATGCAGGATTGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLAGLSA*MQDCEP
Trigger: GGGCTCACAATCCTGCATCAAGGCTGACAGCCCTGC...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS TCA 90 bp ACTCATCACTGCTCCACCGGTTTGGGAATGAGGGGCGTAACTTCTTaGTGCACACAATCTCCCTCATGTCCTCATAAGAGGGGTCACTGG +
Preference number: 5 (lower is better)
Translates to: THHCSTGLGMRGVTS*CTQSPSCPHKRGHW
Trigger: CCAGTGACCCCTCTTATGAGGACATGAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCTCATTCCCAAACCGGTGGAGCAGTGATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000509540.6
ENST00000512312.5
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTTAGCTATAGTCCTTaGGACCAGCAGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: AVSPSYKQTWINLSFWELLSYSP*DQQREA
Trigger: GGCCTCCCTCTGCTGGTCCAAAGGACTATAGCTAAG...AAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCACTGCTCCACCGGTTaGGGAATGAGGGGCGTAACT +
Preference number: 5 (lower is better)
Translates to: PTNRHGSISPSGSFSVFAHCSTG*GMRGVT
Trigger: AGTTACGCCCCTCATTCCCAAACCGGTGGAGCAGTG...GGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp TTGATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGGCAGGGCTGTCAGCCTaGATGCAGGATTGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: LMSFALPTNRRVPVGFLQAGLSA*MQDCEP
Trigger: GGGCTCACAATCCTGCATCAAGGCTGACAGCCCTGC...CTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGACACTGCTCCACCGGTTaGGGAATGAGGGGCGTAACT +
Preference number: 5 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRHCSTG*GMRGVT
Trigger: AGTTACGCCCCTCATTCCCAAACCGGTGGAGCAGTG...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCGCAGGGCTGTCAGCCTaGATGCAGGATTGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLAGLSA*MQDCEP
Trigger: GGGCTCACAATCCTGCATCAAGGCTGACAGCCCTGC...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAGGAGCTTCTCTGTCTTaGCCCAGGTCGCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: ILNKLPKRFLRPTNRHGSGASLS*PRSLPE
Trigger: CTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCC...TGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACGGAGCTTCTCTGTCTTaGCCCAGGTCGCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: KQHASYLEQVTQAVSPSYGASLS*PRSLPE
Trigger: CTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCC...GTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATGGAGCTTCTCTGTCTTaGCCCAGGTCGCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: LEQVTQAVSPSYKQTWINGASLS*PRSLPE
Trigger: CTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCC...ATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGCTTCCAGCCAACCCATaGCAGCAGCAGAGCAGTCAA +
Preference number: 5 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMLPANP*QQQSSQ
Trigger: TTGACTGCTCTGCTGCTGCAATGGGTTGGCTGGAAG...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440890.7
CDS-3UTR CAA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGGAGGGGCGTAACTTCTaGATGCACACAATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMEGRNF*MHTISL
Trigger: GAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCTC...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGAGGGGCGTAACTTCTaGATGCACACAATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: PTGKQDDVQGLYCGCLFDEGRNF*MHTISL
Trigger: GAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCTC...ATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTCACTGCTCCACCGGTTaGGGAATGAGGGGCGTAACT +
Preference number: 5 (lower is better)
Translates to: ESNMHHILNKLPKRFLRPHCSTG*GMRGVT
Trigger: AGTTACGCCCCTCATTCCCAAACCGGTGGAGCAGTG...AGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTGCAGGGCTGTCAGCCTaGATGCAGGATTGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: SRTMFKACTVDAYLMSFAAGLSA*MQDCEP
Trigger: GGGCTCACAATCCTGCATCAAGGCTGACAGCCCTGC...AGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp TCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTCGCTCCCTGAGAGGTGAGGTCTTATGGCAGGCTTGCTaGTTTAACTTTTTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: SFWELLCLCPGRSLRGEVLWQAC*FNFLFP
Trigger: AGGAAACAAAAAGTTAAACAAGCAAGCCTGCCATAA...GACCTCACCTCTCAGGGAGCGACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTCTTAGCTATAGTCCTTaGGACCAGCAGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: QTEEYLLAFCRDAYFSSPLSYSP*DQQREA
Trigger: GGCCTCCCTCTGCTGGTCCAAAGGACTATAGCTAAG...AGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCTTAGCTATAGTCCTTaGGACCAGCAGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: PQTEEYLLAFCRDAYFSSLSYSP*DQQREA
Trigger: GGCCTCCCTCTGCTGGTCCAAAGGACTATAGCTAAG...AGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGAGAGGGGCGTAACTTCTaGATGCACACAATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: MSFALPTNRRVPVGFLQREGRNF*MHTISL
Trigger: GAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCTC...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACACACTGCTCCACCGGTTaGGGAATGAGGGGCGTAACT +
Preference number: 5 (lower is better)
Translates to: MFKACTVDAYLMSFALPTHCSTG*GMRGVT
Trigger: AGTTACGCCCCTCATTCCCAAACCGGTGGAGCAGTG...TGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGGCAGCCCATAACAGTTaGTGGCCTCTACTAACTGTC +
Preference number: 5 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLAAHNS*WPLLTV
Trigger: GACAGTTAGTAGAGGCCACAAACTGTTATGGGCTGC...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACCTTAGCTATAGTCCTTaGGACCAGCAGAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: NMHHILNKLPKRFLRPTNLSYSP*DQQREA
Trigger: GGCCTCCCTCTGCTGGTCCAAAGGACTATAGCTAAG...GTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACGAGGGGCGTAACTTCTaGATGCACACAATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHEGRNF*MHTISL
Trigger: GAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCTC...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp TCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCACAGAAGAGTACCTGTaGGCTTTCTGCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: SFALPTNRRVPVGFLQRCTEEYL*AFCRDA
Trigger: AGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGT...GCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCACAGAAGAGTACCTGTaGGCTTTCTGCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: PTNRHGSISPSGSFSVFATEEYL*AFCRDA
Trigger: AGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGT...GGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTACTGTGGATGCTTATTaGATGTCTTTTGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: AVSPSYKQTWINLSFWELTVDAY*MSFALP
Trigger: GGGCAGAGCAAAAGACATCAAATAAGCATCCACAGT...AAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CAAAAGGCCACCTGCAGGAATTCCAAATGTGGTCCTAGACAGGCGGTGTTTGTATCGAGGTCTGGTTTCTaGTCTTTTATACCGGAAGTA +
Preference number: 5 (lower is better)
Translates to: QKATCRNSKCGPRQAVFVSRSGF*SFIPEV
Trigger: TACTTCCGGTATAAAAGACAAGAAACCAGACCTCGA...TACAAACACCGCCTGTCTAGGACCACATTTGGAATTCCTGCAGGTGGCCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTTCGAGGTCTGGTTTCTaGTCTTTTATACCGGAAGTA +
Preference number: 5 (lower is better)
Translates to: AVSPSYKQTWINLSFWELSRSGF*SFIPEV
Trigger: TACTTCCGGTATAAAAGACAAGAAACCAGACCTCGA...AAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATACTGTGGATGCTTATTaGATGTCTTTTGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: PTGKQDDVQGLYCGCLFDTVDAY*MSFALP
Trigger: GGGCAGAGCAAAAGACATCAAATAAGCATCCACAGT...ATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGACTGTGGATGCTTATTaGATGTCTTTTGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLTVDAY*MSFALP
Trigger: GGGCAGAGCAAAAGACATCAAATAAGCATCCACAGT...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTAACATGCATCATATCTaGAACAAGTTACCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: AVSPSYKQTWINLSFWELNMHHI*NKLPKR
Trigger: CCGCTTGGGTAACTTGTTCAAGATATGATGCATGTT...AAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTCTAGACAGGCGGTGTTaGTACCCAGTGCATTCACAT +
Preference number: 5 (lower is better)
Translates to: ESNMHHILNKLPKRFLRPLDRRC*YPVHSH
Trigger: ATGTGAATGCACTGGGTACAAACACCGCCTGTCTAG...AGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACCTAGACAGGCGGTGTTaGTACCCAGTGCATTCACAT +
Preference number: 5 (lower is better)
Translates to: KQHASYLEQVTQAVSPSYLDRRC*YPVHSH
Trigger: ATGTGAATGCACTGGGTACAAACACCGCCTGTCTAG...GTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACCTAGACAGGCGGTGTTaGTACCCAGTGCATTCACAT +
Preference number: 5 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHLDRRC*YPVHSH
Trigger: ATGTGAATGCACTGGGTACAAACACCGCCTGTCTAG...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCCTGCAGCCCATAACAGTTaGTGGCCTCTACTAACTGTC +
Preference number: 5 (lower is better)
Translates to: QTEEYLLAFCRDAYFSSPAAHNS*WPLLTV
Trigger: GACAGTTAGTAGAGGCCACAAACTGTTATGGGCTGC...AGGAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACGCAGCCCATAACAGTTaGTGGCCTCTACTAACTGTC +
Preference number: 5 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHAAHNS*WPLLTV
Trigger: GACAGTTAGTAGAGGCCACAAACTGTTATGGGCTGC...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTTGTTATCAAGGAAGTTaGCTTCTCACTTATGGCAGG +
Preference number: 5 (lower is better)
Translates to: AVSPSYKQTWINLSFWELCYQGS*LLTYGR
Trigger: CCTGCCATAAGTGAGAAGCAAACTTCCTTGATAACA...AAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTCACCATCCTCTTTCTaGGTGCCCACATTTAATTTT +
Preference number: 5 (lower is better)
Translates to: LRPTNRHGSISPSGSFSVSPSSF*VPTFNF
Trigger: AAAATTAAATGTGGGCACCAAGAAAGAGGATGGTGA...GACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AACCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGTCTGTGCTGCAAATATaGTTGACTGAGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: NPLGSRTMFKACTVDAYLSVLQI*LTESSG
Trigger: TCCAGAAGACTCAGTCAACAATATTTGCAGCACAGA...CAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp TCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTCTGTGCTGCAAATATaGTTGACTGAGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: SVLQTDMDQSLLLGASLSSVLQI*LTESSG
Trigger: TCCAGAAGACTCAGTCAACAATATTTGCAGCACAGA...AGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTGTGCTGCAAATATaGTTGACTGAGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMSVLQI*LTESSG
Trigger: TCCAGAAGACTCAGTCAACAATATTTGCAGCACAGA...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCCAGGTTCGAGGTCTGGTTTCTaGTCTTTTATACCGGAAGTA +
Preference number: 5 (lower is better)
Translates to: KQTWINLSFWELLCLCPGSRSGF*SFIPEV
Trigger: TACTTCCGGTATAAAAGACAAGAAACCAGACCTCGA...ACCTGGGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCGAGGTCTGGTTTCTaGTCTTTTATACCGGAAGTA +
Preference number: 5 (lower is better)
Translates to: PLGSRTMFKACTVDAYLMSRSGF*SFIPEV
Trigger: TACTTCCGGTATAAAAGACAAGAAACCAGACCTCGA...CATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp TCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTGGGACTCTGACATTTaGGCAAGTGTTTTCTTAACC +
Preference number: 5 (lower is better)
Translates to: SVLQTDMDQSLLLGASLSWDSDI*ASVFLT
Trigger: GGTTAAGAAAACACTTGCCAAAATGTCAGAGTCCCA...AGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGTGGGACTCTGACATTTaGGCAAGTGTTTTCTTAACC +
Preference number: 5 (lower is better)
Translates to: DVFCSAHKQKSTCWLSAEWDSDI*ASVFLT
Trigger: GGTTAAGAAAACACTTGCCAAAATGTCAGAGTCCCA...CTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACACAGAAGAGTACCTGTaGGCTTTCTGCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHTEEYL*AFCRDA
Trigger: AGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGT...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCACAGAAGAGTACCTGTaGGCTTTCTGCAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: DDVQGLYCGCLFDVFCSATEEYL*AFCRDA
Trigger: AGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGT...GGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp TCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCGACGATGTTCAAGGCTaGTACTGTGGATGCTTATTT +
Preference number: 5 (lower is better)
Translates to: SFALPTNRRVPVGFLQRCDDVQG*YCGCLF
Trigger: AAATAAGCATCCACAGTACAAGCCTTGAACATCGTC...GCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp TCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTGACGATGTTCAAGGCTaGTACTGTGGATGCTTATTT +
Preference number: 5 (lower is better)
Translates to: SVLQTDMDQSLLLGASLSDDVQG*YCGCLF
Trigger: AAATAAGCATCCACAGTACAAGCCTTGAACATCGTC...AGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCCACTGGGAAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGACGATGTTCAAGGCTaGTACTGTGGATGCTTATTT +
Preference number: 5 (lower is better)
Translates to: PTGKQDDVQGLYCGCLFDDDVQG*YCGCLF
Trigger: AAATAAGCATCCACAGTACAAGCCTTGAACATCGTC...ATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTTCCCAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGAACATGCATCATATCTaGAACAAGTTACCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: DVFCSAHKQKSTCWLSAENMHHI*NKLPKR
Trigger: CCGCTTGGGTAACTTGTTCAAGATATGATGCATGTT...CTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGCATTTCCTATCTTTGTaGACATGTTCCTCTTACAAC +
Preference number: 5 (lower is better)
Translates to: PKRFLRPTNRHGSISPSGHFLSL*TCSSYN
Trigger: GTTGTAAGAGGAACATGTCAACAAAGATAGGAAATG...CCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ACAGGCGGTGTTTGTACCCAGTGCATTCACATTACCATAGCGGCCCCAAATGCATTATGGCAGGCTTGCTaGTTTAACTTTTTGTTTCCT +
Preference number: 5 (lower is better)
Translates to: TGGVCTQCIHITIAAPNALWQAC*FNFLFP
Trigger: AGGAAACAAAAAGTTAAACAAGCAAGCCTGCCATAA...TGCATTTGGGGCCGCTATGGTAATGTGAATGCACTGGGTACAAACACCGCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGTTATCAAGGAAGTTaGCTTCTCACTTATGGCAGG +
Preference number: 5 (lower is better)
Translates to: PSYKQTWINLSFWELLCLCYQGS*LLTYGR
Trigger: CCTGCCATAAGTGAGAAGCAAACTTCCTTGATAACA...AAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATCTGTGCTGCAAATATaGTTGACTGAGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRSVLQI*LTESSG
Trigger: TCCAGAAGACTCAGTCAACAATATTTGCAGCACAGA...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCTTGATTTCTGTACGCTaGATATATGGTTGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLLISVR*IYGCQA
Trigger: AGCCTGGCAACCATATATCAAGCGTACAGAAATCAA...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264568.8
CDS-3UTR CAA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATCACCATCCTCTTTCTaGGTGCCCACATTTAATTTT +
Preference number: 5 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRSPSSF*VPTFNF
Trigger: AAAATTAAATGTGGGCACCAAGAAAGAGGATGGTGA...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCTCGAGGTCTGGTTTCTaGTCTTTTATACCGGAAGTA +
Preference number: 5 (lower is better)
Translates to: DDVQGLYCGCLFDVFCSASRSGF*SFIPEV
Trigger: TACTTCCGGTATAAAAGACAAGAAACCAGACCTCGA...GGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCTGTCTTTGCCAATTGCTGGTTTGCCTaGAGTACTAAAGATTTCTGT +
Preference number: 5 (lower is better)
Translates to: PTNRHGSISPSGSFSVFANCWFA*STKDFC
Trigger: ACAGAAATCTTTAGTACTCAAGGCAAACCAGCAATT...GGCAAAGACAGAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp TTTCTTAGAAAGCAACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTGAGGGGCGTAACTTCTaGATGCACACAATCTCCCTC +
Preference number: 5 (lower is better)
Translates to: FLRKQHASYLEQVTQAVSEGRNF*MHTISL
Trigger: GAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCTC...AGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTTGCTTTCTAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATTGGGACTCTGACATTTaGGCAAGTGTTTTCTTAACC +
Preference number: 5 (lower is better)
Translates to: LEQVTQAVSPSYKQTWINWDSDI*ASVFLT
Trigger: GGTTAAGAAAACACTTGCCAAAATGTCAGAGTCCCA...ATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GATGAGTTCCGTTCTATGTCCTCCAACTTAGACTGTCTTTTGGTTCACAGAGTGTGGGACTCTGACATTTaGGCAAGTGTTTTCTTAACC +
Preference number: 5 (lower is better)
Translates to: DEFRSMSSNLDCLLVHRVWDSDI*ASVFLT
Trigger: GGTTAAGAAAACACTTGCCAAAATGTCAGAGTCCCA...CACTCTGTGAACCAAAAGACAGTCTAAGTTGGAGGACATAGAACGGAACTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCACTGTGGATGCTTATTaGATGTCTTTTGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: KQDDVQGLYCGCLFDVFCTVDAY*MSFALP
Trigger: GGGCAGAGCAAAAGACATCAAATAAGCATCCACAGT...GCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCAATGACGATGTTCAAGGCTaGTACTGTGGATGCTTATTT +
Preference number: 5 (lower is better)
Translates to: LEQVTQAVSPSYKQTWINDDVQG*YCGCLF
Trigger: AAATAAGCATCCACAGTACAAGCCTTGAACATCGTC...ATTGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTCAACATGCATCATATCTaGAACAAGTTACCCAAGCGG +
Preference number: 5 (lower is better)
Translates to: HKQKSTCWLSAEMLTFPLNMHHI*NKLPKR
Trigger: CCGCTTGGGTAACTTGTTCAAGATATGATGCATGTT...GAGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp CCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGATGCTTACTTTTCCTCTTTCATTTGTTCCATATaGCCTGAAGCTGCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: PQTEEYLLAFCRDAYFSSFICSI*PEAAKG
Trigger: GCCTTTTGCAGCTTCAGGCAATATGGAACAAATGAA...AGAGGAAAAGTAAGCATCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAGACATGGATCATTCATTTGTTCCATATaGCCTGAAGCTGCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: ILNKLPKRFLRPTNRHGSFICSI*PEAAKG
Trigger: GCCTTTTGCAGCTTCAGGCAATATGGAACAAATGAA...TGATCCATGTCTGTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGACCTCATTTCCTATCTTaGTTGACATGTTCCTCTTAC +
Preference number: 5 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRPHFLS*LTCSSY
Trigger: GTAAGAGGAACATGTCAACAAAGATAGGAAATGAGG...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GTTTCTCCGTCCTACAAACAGACATGGATCAATCTCTCCTTCTGGGAGCTTCTCAACGAAACCCCTATATaGCCAACTTTTCTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: VSPSYKQTWINLSFWELLNETPI*PTFLQK
Trigger: TTTTTGGAGAAAAGTTGGCAATATAGGGGTTTCGTT...GAGAAGCTCCCAGAAGGAGAGATTGATCCATGTCTGTTTGTAGGACGGAGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440890.7
ENST00000515059.6
CDS-3UTR CAA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACTCACCATCCTCTTTCTaGGTGCCCACATTTAATTTT +
Preference number: 5 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHSPSSF*VPTFNF
Trigger: AAAATTAAATGTGGGCACCAAGAAAGAGGATGGTGA...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GATGAGTTCCGTTCTATGTCCTCCAACTTAGACTGTCTTTTGGTTCACAGAGTGTCACCATCCTCTTTCTaGGTGCCCACATTTAATTTT +
Preference number: 5 (lower is better)
Translates to: DEFRSMSSNLDCLLVHRVSPSSF*VPTFNF
Trigger: AAAATTAAATGTGGGCACCAAGAAAGAGGATGGTGA...CACTCTGTGAACCAAAAGACAGTCTAAGTTGGAGGACATAGAACGGAACTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACATCTGTGCTGCAAATATaGTTGACTGAGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: MFKACTVDAYLMSFALPTSVLQI*LTESSG
Trigger: TCCAGAAGACTCAGTCAACAATATTTGCAGCACAGA...TGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGAAATTGCTGGTTTGCCTaGAGTACTAAAGATTTCTGT +
Preference number: 5 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRNCWFA*STKDFC
Trigger: ACAGAAATCTTTAGTACTCAAGGCAAACCAGCAATT...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGTGGGACTCTGACATTTaGGCAAGTGTTTTCTTAACC +
Preference number: 5 (lower is better)
Translates to: RTMFKACTVDAYLMSFALWDSDI*ASVFLT
Trigger: GGTTAAGAAAACACTTGCCAAAATGTCAGAGTCCCA...CAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTGACGATGTTCAAGGCTaGTACTGTGGATGCTTATTT +
Preference number: 5 (lower is better)
Translates to: SRTMFKACTVDAYLMSFADDVQG*YCGCLF
Trigger: AAATAAGCATCCACAGTACAAGCCTTGAACATCGTC...AGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AAGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTTCATTTGTTCCATATaGCCTGAAGCTGCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: KQDDVQGLYCGCLFDVFCFICSI*PEAAKG
Trigger: GCCTTTTGCAGCTTCAGGCAATATGGAACAAATGAA...GCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ATGTCTTTTGCTCTGCCCACAAACAGAAGAGTACCTGTTGGCTTTCTGCAGAGACATTTCCTATCTTTGTaGACATGTTCCTCTTACAAC +
Preference number: 5 (lower is better)
Translates to: MSFALPTNRRVPVGFLQRHFLSL*TCSSYN
Trigger: GTTGTAAGAGGAACATGTCAACAAAGATAGGAAATG...TCTCTGCAGAAAGCCAACAGGTACTCTTCTGTTTGTGGGCAGAGCAAAAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS CCA 90 bp ACCAAGAGCAAACTACAGACAGTCACAGATATAAGTAAAGCCCTGTaGTGTATAGGTCCATCAACAAAATCTCTGTTTTTCAATGGAGGC +
Preference number: 5 (lower is better)
Translates to: TKSKLQTVTDISKAL*CIGPSTKSLFFNGG
Trigger: GCCTCCATTGAAAAACAGAGATTTTGTTGATGGACCTATACACCACAGGGCTTTACTTATATCTGTGACTGTCTGTAGTTTGCTCTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000509540.6
ENST00000512312.5
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCAATTGCTGGTTTGCCTaGAGTACTAAAGATTTCTGT +
Preference number: 5 (lower is better)
Translates to: DDVQGLYCGCLFDVFCSANCWFA*STKDFC
Trigger: ACAGAAATCTTTAGTACTCAAGGCAAACCAGCAATT...GGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp GATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACCATTTCCTATCTTTGTaGACATGTTCCTCTTACAAC +
Preference number: 5 (lower is better)
Translates to: DVQGLYCGCLFDVFCSAHHFLSL*TCSSYN
Trigger: GTTGTAAGAGGAACATGTCAACAAAGATAGGAAATG...GTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACCCTCATTTCCTATCTTaGTTGACATGTTCCTCTTAC +
Preference number: 5 (lower is better)
Translates to: NMHHILNKLPKRFLRPTNPHFLS*LTCSSY
Trigger: GTAAGAGGAACATGTCAACAAAGATAGGAAATGAGG...GTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AGCAGGACGATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTAATTGCTGGTTTGCCTaGAGTACTAAAGATTTCTGT +
Preference number: 5 (lower is better)
Translates to: SRTMFKACTVDAYLMSFANCWFA*STKDFC
Trigger: ACAGAAATCTTTAGTACTCAAGGCAAACCAGCAATT...AGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACATCGTCCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp ATGTTCAAGGCTTGTACTGTGGATGCTTATTTGATGTCTTTTGCTCTGCCCACAAATTGCTGGTTTGCCTaGAGTACTAAAGATTTCTGT +
Preference number: 5 (lower is better)
Translates to: MFKACTVDAYLMSFALPTNCWFA*STKDFC
Trigger: ACAGAAATCTTTAGTACTCAAGGCAAACCAGCAATT...TGTGGGCAGAGCAAAAGACATCAAATAAGCATCCACAGTACAAGCCTTGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000515059.6
ENST00000672698.1
CDS-3UTR CAA 90 bp AACATGCATCATATCTTGAACAAGTTACCCAAGCGGTTTCTCCGTCCTACAAACAACGAAACCCCTATATaGCCAACTTTTCTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: NMHHILNKLPKRFLRPTNNETPI*PTFLQK
Trigger: TTTTTGGAGAAAAGTTGGCAATATAGGGGTTTCGTT...GTTTGTAGGACGGAGAAACCGCTTGGGTAACTTGTTCAAGATATGATGCATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440890.7
ENST00000515059.6
CDS TCA 90 bp TCTTGTCATAGCTCAGAGCCAAATGGTTATGAATCAGCAGAAGTCTaGACCTTAAATCTTGGGCCCTTACTACTATATCTTTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: SCHSSEPNGYESAEV*TLNLGPLLLYLSVT
Trigger: TGTTACTGAAAGATATAGTAGTAAGGGCCCAAGATTTAAGGTTCAGACTTCTGCTGATTCATAACCATTTGGCTCTGAGCTATGACAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672698.1
CDS TCA 72 bp TGCTCCACCGGTTTGGGAATGAGGGGCGTAACTTCTTaGTGCACACAATCTCCCTCATGTCCTCATAAGAGG +
Preference number: 6 (lower is better)
Translates to: CSTGLGMRGVTS*CTQSPSCPHKR
Trigger: CCTCTTATGAGGACATGAGGGAGATTGTGTGCATCAAGAAGTTACGCCCCTCATTCCCAAACCGGTGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000509540.6
ENST00000512312.5
ENST00000515059.6
ENST00000672698.1
CDS TCA 72 bp GAAAATCTGAGCCTTCTAGTCCTAGGCAACCAGAAGTaGCCACAGGCAACCCAGAGTCATCCTCTTCTATCA +
Preference number: 6 (lower is better)
Translates to: ENLSLLVLGNQK*PQATQSHPLLS
Trigger: TGATAGAAGAGGATGACTCTGGGTTGCCTGTGGTCACTTCTGGTTGCCTAGGACTAGAAGGCTCAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000502683.6
ENST00000506363.5
ENST00000509540.6
ENST00000512312.5
ENST00000515059.6
ENST00000672698.1
CDS CCA 72 bp ACACAATCTCCCTCATGTCCTCATAAGAGGGGTCACTaGGCACTAGGTCATGATAAGGAAGCTGGTATTCTT +
Preference number: 6 (lower is better)
Translates to: TQSPSCPHKRGH*ALGHDKEAGIL
Trigger: AAGAATACCAGCTTCCTTATCATGACCTAGTGCCCAGTGACCCCTCTTATGAGGACATGAGGGAGATTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000509540.6
ENST00000512312.5
ENST00000515059.6
ENST00000672698.1
CDS CAA 72 bp TCCTATCAGAGTTTAATGTCCTGGGACTCTGACATTTaGGCAAGTGTTTTCTTAACCCGCAGGGCTGTCAGC +
Preference number: 6 (lower is better)
Translates to: SYQSLMSWDSDI*ASVFLTRRAVS
Trigger: GCTGACAGCCCTGCGGGTTAAGAAAACACTTGCCAAAATGTCAGAGTCCCAGGACATTAAACTCTGATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000509540.6
ENST00000515059.6
ENST00000672698.1
CDS TCA 72 bp TTTCCTCTCCTATCAGAGTTTAATGTCCTGGGACTCTaGCATTTTGGCAAGTGTTTTCTTAACCCGCAGGGC +
Preference number: 6 (lower is better)
Translates to: FPLLSEFNVLGL*HFGKCFLNPQG
Trigger: GCCCTGCGGGTTAAGAAAACACTTGCCAAAATGTCAGAGTCCCAGGACATTAAACTCTGATAGGAGAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000509540.6
ENST00000515059.6
ENST00000672698.1
CDS TCA 72 bp GAAGTTTGTGATAGGACACAATATGAAATTGGTGCTTaGGAGCTGTTCCTACCACACGCAGGAAACGTCTTG +
Preference number: 6 (lower is better)
Translates to: EVCDRTQYEIGA*ELFLPHAGNVL
Trigger: CAAGACGTTTCCTGCGTGTGGTAGGAACAGCTCTCAAGCACCAATTTCATATTGTGTCCTATCACAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512312.5
CDS CAA 72 bp ATAAATATTGACCCTGACACTTGCTCAGTGCTTTACTaGCTCATGGCACAGGTCTGTGTTACTGAACACCGT +
Preference number: 6 (lower is better)
Translates to: INIDPDTCSVLY*LMAQVCVTEHR
Trigger: ACGGTGTTCAGTAACACAGACCTGTGCCATGAGCAAGTAAAGCACTGAGCAAGTGTCAGGGTCAATATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506363.5
CDS TCA 72 bp GAAACAATATCCGTCTGTGCTGCAAATATTGTTGACTaGGTCTTCTGGACAATGGTGGTGGCATTTACAACG +
Preference number: 6 (lower is better)
Translates to: ETISVCAANIVD*VFWTMVVAFTT
Trigger: CGTTGTAAATGCCACCACCATTGTCCAGAAGACTCAGTCAACAATATTTGCAGCACAGACGGATATTGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000502683.6
ENST00000506363.5
ENST00000509540.6
ENST00000512312.5
ENST00000515059.6
ENST00000672698.1
CDS TCA 72 bp CTTGTGTGCATAGAGAGAAGAATGAGCAAGAAAATGTaGAGCTGCCAGTTTAGTTCTTCCAGCCAACCCATT +
Preference number: 6 (lower is better)
Translates to: LVCIERRMSKKM*SCQFSSSSQPI
Trigger: AATGGGTTGGCTGGAAGAACTAAACTGGCAGCTTCACATTTTCTTGCTCATTCTTCTCTCTATGCACACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440890.7
CDS CCA 72 bp ATAACAAACTGGAAGTTTCGTCCTTGTGAAGTCTGTTaGCTCTTTACAGTTAGTGAAGTGGTTTCCTGGCTA +
Preference number: 6 (lower is better)
Translates to: ITNWKFRPCEVC*LFTVSEVVSWL
Trigger: TAGCCAGGAAACCACTTCACTAACTGTAAAGAGCCAACAGACTTCACAAGGACGAAACTTCCAGTTTGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672698.1
CDS CAA 72 bp TTATCAAGGAAGTTTGTGATAGGACACAATATGAAATaGGTGCTTGAGAGCTGTTCCTACCACACGCAGGAA +
Preference number: 6 (lower is better)
Translates to: LSRKFVIGHNMK*VLESCSYHTQE
Trigger: TTCCTGCGTGTGGTAGGAACAGCTCTCAAGCACCAATTTCATATTGTGTCCTATCACAAACTTCCTTGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512312.5
CDS TCA 72 bp AGCTCAGAGCCAAATGGTTATGAATCAGCAGAAGTCTaGACCTTAAATCTTGGGCCCTTACTACTATATCTT +
Preference number: 6 (lower is better)
Translates to: SSEPNGYESAEV*TLNLGPLLLYL
Trigger: AAGATATAGTAGTAAGGGCCCAAGATTTAAGGTTCAGACTTCTGCTGATTCATAACCATTTGGCTCTGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672698.1
CDS CCA 72 bp AAACTACAGACAGTCACAGATATAAGTAAAGCCCTGTaGTGTATAGGTCCATCAACAAAATCTCTGTTTTTC +
Preference number: 6 (lower is better)
Translates to: KLQTVTDISKAL*CIGPSTKSLFF
Trigger: GAAAAACAGAGATTTTGTTGATGGACCTATACACCACAGGGCTTTACTTATATCTGTGACTGTCTGTAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000509540.6
ENST00000512312.5
ENST00000515059.6
ENST00000672698.1
CDS CCA 72 bp TTTCATCCTGTTCTAACCCAATGCTGTATCGAGGTCTaGTTTCTTGTCTTTTATACCGGAAGTAACAAAATA +
Preference number: 6 (lower is better)
Translates to: FHPVLTQCCIEV*FLVFYTGSNKI
Trigger: TATTTTGTTACTTCCGGTATAAAAGACAAGAAACCAGACCTCGATACAGCATTGGGTTAGAACAGGATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000264568.8
ENST00000394931.1
ENST00000440890.7
ENST00000509540.6
ENST00000512312.5
ENST00000515059.6
ENST00000672698.1