RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BMP8A (Homo sapiens)

Ensembl gene IDs: ENSG00000183682

Ensembl transcript IDs: ENST00000331593.6

Found 291 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGGGCCGCACACCTGCCACTTCCTCAGCAGAGACCCTAGCGCGTaGGTCACTGCTGGCCCAGACTCCTTCCACGAGCAGGCGAGTGTG +
Preference number: 1 (lower is better)
Translates to: AGPHTCHFLSRDPSA*VTAGPDSFHEQASV
Trigger: CACACTCGCCTGCTCGTGGAAGGAGTCTGGGCCAGCAGTGACCCACGCGCTAGGGTCTCTGCTGAGGAAGTGGCAGGTGTGCGGCCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp GAGATGGTGGAGGGAACTGGAAGCCCCCAGGATTCTTTGCTCCTGTaGGAGTCATACCTCTTTCCCAGGCAGGAGAAGGGGCAGGCCCAG +
Preference number: 1 (lower is better)
Translates to: EMVEGTGSPQDSLLL*ESYLFPRQEKGQAQ
Trigger: CTGGGCCTGCCCCTTCTCCTGCCTGGGAAAGAGGTATGACTCCCACAGGAGCAAAGAATCCTGGGGGCTTCCAGTTCCCTCCACCATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp CCCAAGTCCTATGGCAGCAGGGGGCTCAGGCCATGTCTCAAGCTCTaGGAGAAGGTCATGGGGGCAGATGGGTTCTCTGGGTTGGAAGAG +
Preference number: 1 (lower is better)
Translates to: PKSYGSRGLRPCLKL*EKVMGADGFSGLEE
Trigger: CTCTTCCAACCCAGAGAACCCATCTGCCCCCATGACCTTCTCCCAGAGCTTGAGACATGGCCTGAGCCCCCTGCTGCCATAGGACTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp CCACAGGTCTGCGCAGGCATGGCACTAAGTGTCCCATGGCACATTTaGCCCTCATGGAGGCCTCAAAAGGGCAGGACCAGCACCCTCTTC +
Preference number: 1 (lower is better)
Translates to: PQVCAGMALSVPWHI*PSWRPQKGRTSTLF
Trigger: GAAGAGGGTGCTGGTCCTGCCCTTTTGAGGCCTCCATGAGGGCCAAATGTGCCATGGGACACTTAGTGCCATGCCTGCGCAGACCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 90 bp ACTCCTAGACACAAGCAAACACTGGCAGTCCCCACCCTTGCCCCATaGCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGA +
Preference number: 1 (lower is better)
Translates to: TPRHKQTLAVPTLAP*LAGDCQSPCFGWNG
Trigger: TCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCATGGGGCAAGGGTGGGGACTGCCAGTGTTTGCTTGTGTCTAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp GGAAGAGGCAGAGCCCTTCTCCTCACACCTAAACCCTCTGGTGAATaGAGAAAAGCTCGGGTCAGCCAACCTCAGACCATCCGGGGCCAG +
Preference number: 1 (lower is better)
Translates to: GRGRALLLTPKPSGE*RKARVSQPQTIRGQ
Trigger: CTGGCCCCGGATGGTCTGAGGTTGGCTGACCCGAGCTTTTCTCCATTCACCAGAGGGTTTAGGTGTGAGGAGAAGGGCTCTGCCTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp TGCGCAGGCATGGCACTAAGTGTCCCATGGCACATTTGGCCCTCATaGAGGCCTCAAAAGGGCAGGACCAGCACCCTCTTCTACGGAGGA +
Preference number: 1 (lower is better)
Translates to: CAGMALSVPWHIWPS*RPQKGRTSTLFYGG
Trigger: TCCTCCGTAGAAGAGGGTGCTGGTCCTGCCCTTTTGAGGCCTCCATGAGGGCCAAATGTGCCATGGGACACTTAGTGCCATGCCTGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 90 bp GGGGCCAGCCACAGTCTGACAGGTCCTAAGATAGGACTTCTGTGCTaGCTCCAGACAGTGCAGTCAGCACAGGCTCTGAGGCTGCTGTGT +
Preference number: 1 (lower is better)
Translates to: GASHSLTGPKIGLLC*LQTVQSAQALRLLC
Trigger: ACACAGCAGCCTCAGAGCCTGTGCTGACTGCACTGTCTGGAGTCAGCACAGAAGTCCTATCTTAGGACCTGTCAGACTGTGGCTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 90 bp TTTGCACGCTCACCTGGCATTAGGGCCAGCACTGTGCTGCAGTTGTaGAGATGGCCACTGGGTTGGGGGTTGTTCTGCACCAAATGGCCC +
Preference number: 1 (lower is better)
Translates to: FARSPGIRASTVLQL*RWPLGWGLFCTKWP
Trigger: GGGCCATTTGGTGCAGAACAACCCCCAACCCAGTGGCCATCTTCACAACTGCAGCACAGTGCTGGCCCTAATGCCAGGTGAGCGTGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 90 bp TGCGGGGGCATTTGCTCTGTGCCAGCCTACACTACATGTTGGAGCTaGTGGTCTTGCCTCTGTCTCAGTGCTGAGCCCCAAATGGGTCAG +
Preference number: 1 (lower is better)
Translates to: CGGICSVPAYTTCWS*WSCLCLSAEPQMGQ
Trigger: CTGACCCATTTGGGGCTCAGCACTGAGACAGAGGCAAGACCAGCAGCTCCAACATGTAGTGTAGGCTGGCACAGAGCAAATGCCCCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp GGTTGGGGGTTGTTCTGCACCAAATGGCCCCAGACTCCCTGTCAGTaGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATT +
Preference number: 1 (lower is better)
Translates to: GWGLFCTKWPQTPCQ*LLVAASGPELTTLI
Trigger: AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGGAGTCTGGGGCCATTTGGTGCAGAACAACCCCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 90 bp ATGGATTGCTCTGCAGTGGGGCAGGAGGGGGAACTGAGGTCTTATTaGCAATGCCTGGTGGTGGCTGTCTGCAGTTCTGTGCTGAGGCCT +
Preference number: 1 (lower is better)
Translates to: MDCSAVGQEGELRSY*QCLVVAVCSSVLRP
Trigger: AGGCCTCAGCACAGAACTGCAGACAGCCACCACCAGGCATTGTCAATAAGACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 90 bp GGGCCTGAGCTGACCACCCTTATTTATGCTCCTGATGTGCAGCCTTaGATGCATCCTGGGCTGTGGGAGGCAACCAGGCCAGAAGATGAC +
Preference number: 1 (lower is better)
Translates to: GPELTTLIYAPDVQP*MHPGLWEATRPEDD
Trigger: GTCATCTTCTGGCCTGGTTGCCTCCCACAGCCCAGGATGCATTCAAGGCTGCACATCAGGAGCATAAATAAGGGTGGTCAGCTCAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 90 bp AACAGGACTTTGCACGCTCACCTGGCATTAGGGCCAGCACTGTGCTaGAGTTGTGAAGATGGCCACTGGGTTGGGGGTTGTTCTGCACCA +
Preference number: 1 (lower is better)
Translates to: NRTLHAHLALGPALC*SCEDGHWVGGCSAP
Trigger: TGGTGCAGAACAACCCCCAACCCAGTGGCCATCTTCACAACTGCAGCACAGTGCTGGCCCTAATGCCAGGTGAGCGTGCAAAGTCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp GGGGGCATTTGCTCTGTGCCAGCCTACACTACATGTTGGAGCTGCTaGTCTTGCCTCTGTCTCAGTGCTGAGCCCCAAATGGGTCAGCAT +
Preference number: 1 (lower is better)
Translates to: GGICSVPAYTTCWSC*SCLCLSAEPQMGQH
Trigger: ATGCTGACCCATTTGGGGCTCAGCACTGAGACAGAGGCAAGACCAGCAGCTCCAACATGTAGTGTAGGCTGGCACAGAGCAAATGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATaGCAGCAGGGGGCTCAGGCCATGTCTCAAGCTCTGGGAGAAGGT +
Preference number: 1 (lower is better)
Translates to: AVKSGPAMADRPQVL*QQGAQAMSQALGEG
Trigger: ACCTTCTCCCAGAGCTTGAGACATGGCCTGAGCCCCCTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp CTGTTTATTCCACAGGTCTGCGCAGGCATGGCACTAAGTGTCCCATaGCACATTTGGCCCTCATGGAGGCCTCAAAAGGGCAGGACCAGC +
Preference number: 1 (lower is better)
Translates to: LFIPQVCAGMALSVP*HIWPSWRPQKGRTS
Trigger: GCTGGTCCTGCCCTTTTGAGGCCTCCATGAGGGCCAAATGTGCCATGGGACACTTAGTGCCATGCCTGCGCAGACCTGTGGAATAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 90 bp AGAAACAGGACTTTGCACGCTCACCTGGCATTAGGGCCAGCACTGTaGTGCAGTTGTGAAGATGGCCACTGGGTTGGGGGTTGTTCTGCA +
Preference number: 1 (lower is better)
Translates to: RNRTLHAHLALGPAL*CSCEDGHWVGGCSA
Trigger: TGCAGAACAACCCCCAACCCAGTGGCCATCTTCACAACTGCAGCACAGTGCTGGCCCTAATGCCAGGTGAGCGTGCAAAGTCCTGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp GCTGAGCCCCAAATGGGTCAGCATGGTAGAGATGGTGGAGGGAACTaGAAGCCCCCAGGATTCTTTGCTCCTGTGGGAGTCATACCTCTT +
Preference number: 1 (lower is better)
Translates to: AEPQMGQHGRDGGGN*KPPGFFAPVGVIPL
Trigger: AAGAGGTATGACTCCCACAGGAGCAAAGAATCCTGGGGGCTTCCAGTTCCCTCCACCATCTCTACCATGCTGACCCATTTGGGGCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp CTGCCCAGTATTGGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATaGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGGGCTCAGGCCA +
Preference number: 1 (lower is better)
Translates to: LPSIGRRELLNQVLQ*QIGPKSYGSRGLRP
Trigger: TGGCCTGAGCCCCCTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAATACTGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 90 bp CTTTGGATGGAATGGATTGCTCTGCAGTGGGGCAGGAGGGGGAACTaGGGTCTTATTGACAATGCCTGGTGGTGGCTGTCTGCAGTTCTG +
Preference number: 1 (lower is better)
Translates to: LWMEWIALQWGRRGN*GLIDNAWWWLSAVL
Trigger: CAGAACTGCAGACAGCCACCACCAGGCATTGTCAATAAGACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 90 bp TGTGGGAGGCAACCAGGCCAGAAGATGACCTTGATAGCTGAGCACTaGCCCTTCATCAGCTGTGTGTCCTTACGACCTCCTCCCTTTCTG +
Preference number: 1 (lower is better)
Translates to: CGRQPGQKMTLIAEH*PFISCVSLRPPPFL
Trigger: CAGAAAGGGAGGAGGTCGTAAGGACACACAGCTGATGAAGGGTCAGTGCTCAGCTATCAAGGTCATCTTCTGGCCTGGTTGCCTCCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 90 bp AGACTCCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTaGCCACCCTTATTTATGCTCCTGATGTGCAGCCTTGAATGCATC +
Preference number: 1 (lower is better)
Translates to: RLPVSGYLLQPVGLS*PPLFMLLMCSLECI
Trigger: GATGCATTCAAGGCTGCACATCAGGAGCATAAATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGGAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 90 bp GTCTGGCCACCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCTaGATAAAAAGGGAGTCTCATCATGATCCTCAGGCCTGCTGTGCA +
Preference number: 1 (lower is better)
Translates to: VWPPGRPRLSHFVLC*IKRESHHDPQACCA
Trigger: TGCACAGCAGGCCTGAGGATCATGATGAGACTCCCTTTTTATGCAGCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGGTGGCCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 90 bp CAGGCCTGCTGTGCACACCTGATGGGCATAGCAGCGTTTGCGTCTTaGAAACATTCATTTCACAAACTCCTAGCACACCCAAACCATGCC +
Preference number: 1 (lower is better)
Translates to: QACCAHLMGIAAFAS*KHSFHKLLAHPNHA
Trigger: GGCATGGTTTGGGTGTGCTAGGAGTTTGTGAAATGAATGTTTTCAAGACGCAAACGCTGCTATGCCCATCAGGTGTGCACAGCAGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp ACACACTGTGCTGAGAACATAAGCGTGTCCAATTTTGCCCAGAAATaGCCAGTGTTGTACCTGGGAAGAGGCAGAGCCCTTCTCCTCACA +
Preference number: 1 (lower is better)
Translates to: THCAENISVSNFAQK*PVLYLGRGRALLLT
Trigger: TGTGAGGAGAAGGGCTCTGCCTCTTCCCAGGTACAACACTGGCCATTTCTGGGCAAAATTGGACACGCTTATGTTCTCAGCACAGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 90 bp ACTGTCACACTTTGTGCTTTGCTGCATAAAAAGGGAGTCTCATCATaGTCCTCAGGCCTGCTGTGCACACCTGATGGGCATAGCAGCGTT +
Preference number: 1 (lower is better)
Translates to: TVTLCALLHKKGVSS*SSGLLCTPDGHSSV
Trigger: AACGCTGCTATGCCCATCAGGTGTGCACAGCAGGCCTGAGGATCATGATGAGACTCCCTTTTTATGCAGCAAAGCACAAAGTGTGACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 90 bp ACTGACCCTTCATCAGCTGTGTGTCCTTACGACCTCCTCCCTTTCTaGGGCCTTCTGTATGTGATGTCATTTGGTGGGTGGCTAAAGTTG +
Preference number: 1 (lower is better)
Translates to: TDPSSAVCPYDLLPF*GLLYVMSFGGWLKL
Trigger: CAACTTTAGCCACCCACCAAATGACATCACATACAGAAGGCCTCAGAAAGGGAGGAGGTCGTAAGGACACACAGCTGATGAAGGGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 90 bp AGGAAGGCACACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATaGGCCTGCTCAGAATTGCTGTTTATTCCACAGGTCTGCGCAGGC +
Preference number: 1 (lower is better)
Translates to: RKAHKERPNLQVPLK*ACSELLFIPQVCAG
Trigger: GCCTGCGCAGACCTGTGGAATAAACAGCAATTCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTGTGCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 90 bp AGAGACCACACATTTGTCAGTTTCCGAAACTCTACTGCCCAGTATTaGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATGGCAGATAGG +
Preference number: 1 (lower is better)
Translates to: RDHTFVSFRNSTAQY*KKRAVKSGPAMADR
Trigger: CCTATCTGCCATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAATACTGGGCAGTAGAGTTTCGGAAACTGACAAATGTGTGGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCGGTGGGCACCCAGGGTaGCGCCAATTTTGGTGGCCA +
Preference number: 2 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRGGHPG*RQFWWP
Trigger: TGGCCACCAAAATTGGCGTCACCCTGGGTGCCCACC...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCCAGACTCCCTGTCAGTaGCTACTTGTTGCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRQTPCQ*LLVAAS
Trigger: ACTGGCTGCAACAAGTAGCCACTGACAGGGAGTCTG...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCGCACTAAGTGTCCCATaGCACATTTGGCCCTCATGG +
Preference number: 2 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRALSVP*HIWPSW
Trigger: CCATGAGGGCCAAATGTGCCATGGGACACTTAGTGC...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCGAGGAGTGGGTTTTATaGGGAAGGCACACAAGGAAC +
Preference number: 2 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGREEWVL*GRHTRN
Trigger: GTTCCTTGTGTGCCTTCCTCATAAAACCCACTCCTC...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp AGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCACACCTAGCACACCCAAACCATaGCAGGTTACACACTGGGCA +
Preference number: 2 (lower is better)
Translates to: RAQVGPTLTTGPGQGRTPSTPKP*QVTHWA
Trigger: TGCCCAGTGTGTAACCTGGCATGGTTTGGGTGTGCT...AGGTGTGCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp AGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCACACCTATAAAATATCCCCAGTaGCCAGGCACGGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: RAQVGPTLTTGPGQGRTPIKYPQ*PGTVAH
Trigger: ATGAGCCACCGTGCCTGGCCACTGGGGATATTTTAT...AGGTGTGCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp GGTGGCGTGTGCCTGTCATCCCAGCAACTCGGGCTGAAGTGGGAGGATTGCTTGAGTAGGCACCGAGAGTaGGGGCCCCTGACACTCCTG +
Preference number: 2 (lower is better)
Translates to: GGVCLSSQQLGLKWEDCLSRHRE*GPLTLL
Trigger: CAGGAGTGTCAGGGGCCCTCACTCTCGGTGCCTACT...CAAGCAATCCTCCCACTTCAGCCCGAGTTGCTGGGATGACAGGCACACGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTCCCACCCTTGCCCCATaGCTGGCCGGAGACTGCCAG +
Preference number: 2 (lower is better)
Translates to: PCQWLLVAASGPELTTLIPTLAP*LAGDCQ
Trigger: CTGGCAGTCTCCGGCCAGGCATGGGGCAAGGGTGGG...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCAATTTTGCCCAGAAATaGCCAGTGTTGTACCTGGGA +
Preference number: 2 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRNFAQK*PVLYLG
Trigger: TCCCAGGTACAACACTGGCCATTTCTGGGCAAAATT...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp AGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCACACCTCTTATTGACAATGCCTaGTGGTGGCTGTCTGCAGTT +
Preference number: 2 (lower is better)
Translates to: RAQVGPTLTTGPGQGRTPLIDNA*WWLSAV
Trigger: AACTGCAGACAGCCACCACCAGGCATTGTCAATAAG...AGGTGTGCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 90 bp GAGGCCTGGAGGCCCTGTCCTGGTTCAGTGGGAAAGGTACGTAGGTaGATTACTGACATGAGCCATGGGCAAGGGGAGCAGGCTGCGGGG +
Preference number: 2 (lower is better)
Translates to: EAWRPCPGSVGKVRR*ITDMSHGQGEQAAG
Trigger: CCCCGCAGCCTGCTCCCCTTGCCCATGGCTCATGTCAGTAATCAACCTACGTACCTTTCCCACTGAACCAGGACAGGGCCTCCAGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp GGTCACTGCTGGCCCAGACTCCTTCCACGAGCAGGCGAGTGTGCAGGGCCACACGGGGCATTTGCTCTGTaGCAGCCTACACTACATGTT +
Preference number: 2 (lower is better)
Translates to: GHCWPRLLPRAGECAGPHGAFAL*QPTLHV
Trigger: AACATGTAGTGTAGGCTGGCACAGAGCAAATGCCCC...GTGTGGCCCTGCACACTCGCCTGCTCGTGGAAGGAGTCTGGGCCAGCAGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp GGTGGCGTGTGCCTGTCATCCCAGCAACTCGGGCTGAAGTGGGAGGATTGCTTGCTGGTGGTGGCTGTCTaGAGTTCTGTGCTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: GGVCLSSQQLGLKWEDCLLVVAV*SSVLRP
Trigger: AGGCCTCAGCACAGAACTGCAGACAGCCACCACCAG...CAAGCAATCCTCCCACTTCAGCCCGAGTTGCTGGGATGACAGGCACACGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp GGTGGCGTGTGCCTGTCATCCCAGCAACTCGGGCTGAAGTGGGAGGATTGCTTGCATGATCCTCAGGCCTaGTGTGCACACCTGATGGGC +
Preference number: 2 (lower is better)
Translates to: GGVCLSSQQLGLKWEDCLHDPQA*CAHLMG
Trigger: GCCCATCAGGTGTGCACAGCAGGCCTGAGGATCATG...CAAGCAATCCTCCCACTTCAGCCCGAGTTGCTGGGATGACAGGCACACGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp GGTCACTGCTGGCCCAGACTCCTTCCACGAGCAGGCGAGTGTGCAGGGCCACACATTGACAATGCCTGGTaGTGGCTGTCTGCAGTTCTG +
Preference number: 2 (lower is better)
Translates to: GHCWPRLLPRAGECAGPHIDNAW*WLSAVL
Trigger: CAGAACTGCAGACAGCCACCACCAGGCATTGTCAAT...GTGTGGCCCTGCACACTCGCCTGCTCGTGGAAGGAGTCTGGGCCAGCAGTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 90 bp TCCACAGGTCTGCGCAGGCATGGCACTAAGTGTCCCATGGCACATTaGGCCCTCATGGAGGCCTCAAAAGGGCAGGACCAGCACCCTCTT +
Preference number: 2 (lower is better)
Translates to: STGLRRHGTKCPMAH*ALMEASKGQDQHPL
Trigger: AAGAGGGTGCTGGTCCTGCCCTTTTGAGGCCTCCATGAGGGCCAAATGTGCCATGGGACACTTAGTGCCATGCCTGCGCAGACCTGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp GGTGGCGTGTGCCTGTCATCCCAGCAACTCGGGCTGAAGTGGGAGGATTGCTTGAATACAAGAATGAGCTaGGCGTGGTGGTGGGCCCCT +
Preference number: 2 (lower is better)
Translates to: GGVCLSSQQLGLKWEDCLNTRMS*AWWWAP
Trigger: AGGGGCCCACCACCACGCCCAGCTCATTCTTGTATT...CAAGCAATCCTCCCACTTCAGCCCGAGTTGCTGGGATGACAGGCACACGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp TTGCTAGAAGTCTGGCCACCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCCCCTTGCCCCATGCCTaGCCGGAGACTGCCAGTCAC +
Preference number: 2 (lower is better)
Translates to: LLEVWPPGRPRLSHFVLCPLPHA*PETASH
Trigger: GTGACTGGCAGTCTCCGGCCAGGCATGGGGCAAGGG...GCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGGTGGCCAGACTTCTAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 90 bp TGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATaGCTCTGCAGTGGGGCAGGAGGGGGAACTGAGGTCTTATTGACA +
Preference number: 2 (lower is better)
Translates to: CLAGDCQSPCFGWNG*LCSGAGGGTEVLLT
Trigger: TGTCAATAAGACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 90 bp CAGCGCTGGTGGGCACCCAGGGTGACGCCAATTTTGGTGGCCAGCTaGTTCATAACTCCTAGACACAAGCAAACACTGGCAGTCCCCACC +
Preference number: 2 (lower is better)
Translates to: QRWWAPRVTPILVAS*FITPRHKQTLAVPT
Trigger: GGTGGGGACTGCCAGTGTTTGCTTGTGTCTAGGAGTTATGAACAAGCTGGCCACCAAAATTGGCGTCACCCTGGGTGCCCACCAGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp TTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGGGAAGTGTCGGGCAGAGTaGCAGCCACAAACCCCAGGG +
Preference number: 2 (lower is better)
Translates to: LNQVLQWQIGPKSYGSRGKCRAE*QPQTPG
Trigger: CCCTGGGGTTTGTGGCTGTCACTCTGCCCGACACTT...CCCCCTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTAGGCAGAGGTTGCAGTaGGCCAGGATTGCACCACTG +
Preference number: 2 (lower is better)
Translates to: PCQWLLVAASGPELTTLIRQRLQ*ARIAPL
Trigger: CAGTGGTGCAATCCTGGCTCACTGCAACCTCTGCCT...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGCCTCTGTCTCAGTGCTaGGCCCCAAATGGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALPLSQC*APNGSA
Trigger: TGCTGACCCATTTGGGGCTCAGCACTGAGACAGAGG...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 90 bp AATGGATTGCTCTGCAGTGGGGCAGGAGGGGGAACTGAGGTCTTATaGACAATGCCTGGTGGTGGCTGTCTGCAGTTCTGTGCTGAGGCC +
Preference number: 2 (lower is better)
Translates to: NGLLCSGAGGGTEVL*TMPGGGCLQFCAEA
Trigger: GGCCTCAGCACAGAACTGCAGACAGCCACCACCAGGCATTGTCAATAAGACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp GGTCACTGCTGGCCCAGACTCCTTCCACGAGCAGGCGAGTGTGCAGGGCCACACTTTCCGAAACTCTACTaGCCAGTATTGGAAGAAGAG +
Preference number: 2 (lower is better)
Translates to: GHCWPRLLPRAGECAGPHFPKLY*PVLEEE
Trigger: CTCTTCTTCCAATACTGGGCAGTAGAGTTTCGGAAA...GTGTGGCCCTGCACACTCGCCTGCTCGTGGAAGGAGTCTGGGCCAGCAGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp TTGCTAGAAGTCTGGCCACCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCTCCTCAGGCCTGCTGTaGACACCTGATGGGCATAGC +
Preference number: 2 (lower is better)
Translates to: LLEVWPPGRPRLSHFVLCSSGLL*TPDGHS
Trigger: GCTATGCCCATCAGGTGTGCACAGCAGGCCTGAGGA...GCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGGTGGCCAGACTTCTAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp GGTCACTGCTGGCCCAGACTCCTTCCACGAGCAGGCGAGTGTGCAGGGCCACACTCACACTTTGTGCTTTaGTGCATAAAAAGGGAGTCT +
Preference number: 2 (lower is better)
Translates to: GHCWPRLLPRAGECAGPHSHFVL*CIKRES
Trigger: AGACTCCCTTTTTATGCAGCAAAGCACAAAGTGTGA...GTGTGGCCCTGCACACTCGCCTGCTCGTGGAAGGAGTCTGGGCCAGCAGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGCAGGAGGGGGAACTaGGGTCTTATTGACAATGCC +
Preference number: 2 (lower is better)
Translates to: AVKSGPAMADRPQVLWQQGRRGN*GLIDNA
Trigger: GGCATTGTCAATAAGACCTCAGTTCCCCCTCCTGCC...CTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp GTACATGATGTGGTCAAATTAACAAGAGGCAGAGGCCGGGTAAGTGGCTCACGCGGGTATGGTGGCGTGTaGCTGTCATCCCAGCAACTC +
Preference number: 2 (lower is better)
Translates to: VHDVVKLTRGRGRVSGSRGYGGV*LSSQQL
Trigger: GAGTTGCTGGGATGACAGGCACACGCCACCATACCC...GCGTGAGCCACTTACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTAAACCCTCTGGTGAATaGAGAAAAGCTCGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: PCQWLLVAASGPELTTLIKPSGE*RKARVS
Trigger: GCTGACCCGAGCTTTTCTCCATTCACCAGAGGGTTT...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp GTACATGATGTGGTCAAATTAACAAGAGGCAGAGGCCGGGTAAGTGGCTCACGCGCCTTGAATGCATCCTaGGCTGTGGGAGGCAACCAG +
Preference number: 2 (lower is better)
Translates to: VHDVVKLTRGRGRVSGSRALNAS*AVGGNQ
Trigger: CTGGTTGCCTCCCACAGCCCAGGATGCATTCAAGGC...GCGTGAGCCACTTACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp TTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGGGGAACTGAGGTCTTATTaGCAATGCCTGGTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: LNQVLQWQIGPKSYGSRGELRSY*QCLVVA
Trigger: AGCCACCACCAGGCATTGTCAATAAGACCTCAGTTC...CCCCCTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTTTACACACTGGGCACTaGAGAGACCACACATTTGTC +
Preference number: 2 (lower is better)
Translates to: PCQWLLVAASGPELTTLILHTGH*RDHTFV
Trigger: GACAAATGTGTGGTCTCTTCAGTGCCCAGTGTGTAA...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp GGTGGCGTGTGCCTGTCATCCCAGCAACTCGGGCTGAAGTGGGAGGATTGCTTGCAGCCTCCTTTCCTGTaGAATAATAGGGAATTTCTC +
Preference number: 2 (lower is better)
Translates to: GGVCLSSQQLGLKWEDCLQPPFL*NNREFL
Trigger: GAGAAATTCCCTATTATTTCACAGGAAAGGAGGCTG...CAAGCAATCCTCCCACTTCAGCCCGAGTTGCTGGGATGACAGGCACACGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp GCATCGCCCGGTCCCTATGTAAAGACAAAGAAACAGGACTTTGCACGCTCACCTGCCCCCAGGATTCTTTaGTCCTGTGGGAGTCATACC +
Preference number: 2 (lower is better)
Translates to: ASPGPYVKTKKQDFARSPAPRIL*SCGSHT
Trigger: GGTATGACTCCCACAGGAGCAAAGAATCCTGGGGGC...AGGTGAGCGTGCAAAGTCCTGTTTCTTTGTCTTTACATAGGGACCGGGCGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp AACTCTACTGCCCAGTATTGGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATGACAGGACAGCGCTGGTaGGCACCCAGGGTGACGCCA +
Preference number: 2 (lower is better)
Translates to: NSTAQYWKKRAVKSGPAMTGQRW*APRVTP
Trigger: TGGCGTCACCCTGGGTGCCCACCAGCGCTGTCCTGT...CATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAATACTGGGCAGTAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp TTGCTAGAAGTCTGGCCACCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCCCTGACACTCCTGCTTaGGCTGTGACAGCATTTAAG +
Preference number: 2 (lower is better)
Translates to: LLEVWPPGRPRLSHFVLCPDTPA*AVTAFK
Trigger: CTTAAATGCTGTCACAGCTCAAGCAGGAGTGTCAGG...GCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGGTGGCCAGACTTCTAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGATAGGACTTCTGTGCTaGCTCCAGACAGTGCAGTCA +
Preference number: 2 (lower is better)
Translates to: AVKSGPAMADRPQVLWQQIGLLC*LQTVQS
Trigger: TGACTGCACTGTCTGGAGTCAGCACAGAAGTCCTAT...CTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGCACCCTGGACCAAATaGGAAGAATCCCAGAACACA +
Preference number: 2 (lower is better)
Translates to: AVKSGPAMADRPQVLWQQAPWTK*EESQNT
Trigger: TGTGTTCTGGGATTCTTCTCATTTGGTCCAGGGTGC...CTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp GCATCGCCCGGTCCCTATGTAAAGACAAAGAAACAGGACTTTGCACGCTCACCTCATTTAAGGGTTTTCTaGCTCTGCAGGGCCCGATCC +
Preference number: 2 (lower is better)
Translates to: ASPGPYVKTKKQDFARSPHLRVF*LCRARS
Trigger: GGATCGGGCCCTGCAGAGGCAGAAAACCCTTAAATG...AGGTGAGCGTGCAAAGTCCTGTTTCTTTGTCTTTACATAGGGACCGGGCGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp GTACATGATGTGGTCAAATTAACAAGAGGCAGAGGCCGGGTAAGTGGCTCACGCCTTGGCTCCAAAACCTaGCCTCTCCTTTTCACAGCC +
Preference number: 2 (lower is better)
Translates to: VHDVVKLTRGRGRVSGSRLGSKT*PLLFTA
Trigger: GGCTGTGAAAAGGAGAGGGCAGGTTTTGGAGCCAAG...GCGTGAGCCACTTACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp GGCACACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATGAGCCTGCTCAGAGACACAAGCAAACACTaGCAGTCCCCACCCTTGCCC +
Preference number: 2 (lower is better)
Translates to: GTQGTPKFASPFKMSLLRDTSKH*QSPPLP
Trigger: GGGCAAGGGTGGGGACTGCCAGTGTTTGCTTGTGTC...TCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp TTTGGATGGAATGGATTGCTCTGCAGTGGGGCAGGAGGGGGAACTGAGGTCTTACTCCTGCTTGAGCTGTaGCAGCATTTAAGGGTTTTC +
Preference number: 2 (lower is better)
Translates to: FGWNGLLCSGAGGGTEVLLLLEL*QHLRVF
Trigger: GAAAACCCTTAAATGCTGTCACAGCTCAAGCAGGAG...TAAGACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp AACTCTACTGCCCAGTATTGGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATGGAGAGTGAGGGCCCCTaGCACTCCTGCTTGAGCTGT +
Preference number: 2 (lower is better)
Translates to: NSTAQYWKKRAVKSGPAMESEGP*HSCLSC
Trigger: ACAGCTCAAGCAGGAGTGTCAGGGGCCCTCACTCTC...CATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAATACTGGGCAGTAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp AACTCTACTGCCCAGTATTGGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATGGGCTGCGGGGGCATTTaGTCTGTGCCAGCCTACACT +
Preference number: 2 (lower is better)
Translates to: NSTAQYWKKRAVKSGPAMGCGGI*SVPAYT
Trigger: AGTGTAGGCTGGCACAGAGCAAATGCCCCCGCAGCC...CATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAATACTGGGCAGTAGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTGGGCATAGCAGCGTTTaGGTCTTGAAAACATTCATT +
Preference number: 2 (lower is better)
Translates to: PCQWLLVAASGPELTTLIGHSSV*VLKTFI
Trigger: AATGAATGTTTTCAAGACGCAAACGCTGCTATGCCC...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 90 bp TCAGGCCTGCTGTGCACACCTGATGGGCATAGCAGCGTTTGCGTCTaGAAAACATTCATTTCACAAACTCCTAGCACACCCAAACCATGC +
Preference number: 2 (lower is better)
Translates to: SGLLCTPDGHSSVCV*KTFISQTPSTPKPC
Trigger: GCATGGTTTGGGTGTGCTAGGAGTTTGTGAAATGAATGTTTTCAAGACGCAAACGCTGCTATGCCCATCAGGTGTGCACAGCAGGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp AGGCCCTGTCCTGGTTCAGTGGGAAAGGTACGTAGGTTGATTACTGACATGAGCCAGAACACACTGTGCTaGGAACATAAGCGTGTCCAA +
Preference number: 2 (lower is better)
Translates to: RPCPGSVGKVRRLITDMSQNTLC*EHKRVQ
Trigger: TTGGACACGCTTATGTTCTCAGCACAGTGTGTTCTG...GCTCATGTCAGTAATCAACCTACGTACCTTTCCCACTGAACCAGGACAGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp AGAAAGGGGACTTGTCCTGACACCAAGTCAGTGGCTGAGTTGGAACCAGAATACGACTGCCAGTCACCCTaGTTTGGATGGAATGGATTG +
Preference number: 2 (lower is better)
Translates to: RKGTCPDTKSVAELEPEYDCQSP*FGWNGL
Trigger: CAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTC...GTATTCTGGTTCCAACTCAGCCACTGACTTGGTGTCAGGACAAGTCCCCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp AGGCCCTGTCCTGGTTCAGTGGGAAAGGTACGTAGGTTGATTACTGACATGAGCGATTCTTTGCTCCTGTaGGAGTCATACCTCTTTCCC +
Preference number: 2 (lower is better)
Translates to: RPCPGSVGKVRRLITDMSDSLLL*ESYLFP
Trigger: GGGAAAGAGGTATGACTCCCACAGGAGCAAAGAATC...GCTCATGTCAGTAATCAACCTACGTACCTTTCCCACTGAACCAGGACAGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp GGCACACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATGAGCCTGCTCAGAGCCTACACTACATGTTaGAGCTGCTGGTCTTGCCTC +
Preference number: 2 (lower is better)
Translates to: GTQGTPKFASPFKMSLLRAYTTC*SCWSCL
Trigger: GAGGCAAGACCAGCAGCTCCAACATGTAGTGTAGGC...TCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp GCATCGCCCGGTCCCTATGTAAAGACAAAGAAACAGGACTTTGCACGCTCACCTTCACCCTGCTTTGGATaGAATGGATTGCTCTGCAGT +
Preference number: 2 (lower is better)
Translates to: ASPGPYVKTKKQDFARSPSPCFG*NGLLCS
Trigger: ACTGCAGAGCAATCCATTCCATCCAAAGCAGGGTGA...AGGTGAGCGTGCAAAGTCCTGTTTCTTTGTCTTTACATAGGGACCGGGCGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp GTACATGATGTGGTCAAATTAACAAGAGGCAGAGGCCGGGTAAGTGGCTCACGCAGTCAGTGGCTGAGTTaGAACCAGAATACCTGTCTC +
Preference number: 2 (lower is better)
Translates to: VHDVVKLTRGRGRVSGSRSQWLS*NQNTCL
Trigger: GAGACAGGTATTCTGGTTCCAACTCAGCCACTGACT...GCGTGAGCCACTTACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp TCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGGAGGAGTGGGTTTTATGGGCACGAGAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: SGKYSSTSKHILGGVGFMGTRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTCTCGTGCC...CATAAAACCCACTCCTCCCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp GGCACACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATGAGCCTGCTCAGAGATGACCTTGATAGCTaGGCACTGACCCTTCATCAG +
Preference number: 2 (lower is better)
Translates to: GTQGTPKFASPFKMSLLRDDLDS*ALTLHQ
Trigger: CTGATGAAGGGTCAGTGCTCAGCTATCAAGGTCATC...TCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTGTCATCCCAACACTTTaGGAGGCCGGGCGGGTGGAT +
Preference number: 2 (lower is better)
Translates to: PHLIQEMITFRFLMKSIAVIPTL*EAGRVD
Trigger: ATCCACCCGCCCGGCCTCCCAAAGTGTTGGGATGAC...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp GGCACACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATGAGCCTGCTCAGACCAGTCACCCTGCTTTaGATGGAATGGATTGCTCTG +
Preference number: 2 (lower is better)
Translates to: GTQGTPKFASPFKMSLLRPVTLL*MEWIAL
Trigger: CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGG...TCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp TCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGGAGGAGTGGGTTTTATGCCATGTCTCAAGCTCTaGGAGAAGGTCATGGGGGCA +
Preference number: 2 (lower is better)
Translates to: SGKYSSTSKHILGGVGFMPCLKL*EKVMGA
Trigger: TGCCCCCATGACCTTCTCCCAGAGCTTGAGACATGG...CATAAAACCCACTCCTCCCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 90 bp CAAACCATGCCAGGTTACACACTGGGCACTGAAGAGACCACACATTaGTCAGTTTCCGAAACTCTACTGCCCAGTATTGGAAGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: QTMPGYTLGTEETTH*SVSETLLPSIGRRE
Trigger: CTCTCTTCTTCCAATACTGGGCAGTAGAGTTTCGGAAACTGACAAATGTGTGGTCTCTTCAGTGCCCAGTGTGTAACCTGGCATGGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp GCATCGCCCGGTCCCTATGTAAAGACAAAGAAACAGGACTTTGCACGCTCACCTGCAAGGGAATACACATaGCATAAAATATCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: ASPGPYVKTKKQDFARSPAREYT*HKISPV
Trigger: CACTGGGGATATTTTATGTCATGTGTATTCCCTTGC...AGGTGAGCGTGCAAAGTCCTGTTTCTTTGTCTTTACATAGGGACCGGGCGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp TCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGGAGGAGTGGGTTTTATGTCTGAGGCTGCTGTGTaGCTTAGGCCACCAAAGTGT +
Preference number: 2 (lower is better)
Translates to: SGKYSSTSKHILGGVGFMSEAAV*LRPPKC
Trigger: ACACTTTGGTGGCCTAAGGCACACAGCAGCCTCAGA...CATAAAACCCACTCCTCCCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTTTCTGTGCTGAGGCCTaGAGGCCCTGTCCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: PHLIQEMITFRFLMKSIAFCAEA*RPCPGS
Trigger: TGAACCAGGACAGGGCCTCCAGGCCTCAGCACAGAA...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTAAAGGACCAGAAGCCTaGCAGGAAGTAGGCACCGAG +
Preference number: 2 (lower is better)
Translates to: PHLIQEMITFRFLMKSIAKGPEA*QEVGTE
Trigger: CTCGGTGCCTACTTCCTGTCAGGCTTCTGGTCCTTT...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp GATGAAAAGCATAGCTCTCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGTTGGATGGAATGGATTaGTCTGCAGTGGGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: DEKHSSQVNTAAPLSIFWLDGMD*SAVGQE
Trigger: CTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAA...CCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGAGAGCTATGCTTTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp AACTCTACTGCCCAGTATTGGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATGACATGTTGGAGCTGCTaGTCTTGCCTCTGTCTCAGT +
Preference number: 2 (lower is better)
Translates to: NSTAQYWKKRAVKSGPAMTCWSC*SCLCLS
Trigger: ACTGAGACAGAGGCAAGACCAGCAGCTCCAACATGT...CATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAATACTGGGCAGTAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp GGCACACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATGAGCCTGCTCAGATCAGGAGTTCAAGACTaGCCTGGGCAAAGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: GTQGTPKFASPFKMSLLRSGVQD*PGQSLR
Trigger: TCTTAAACTTTGCCCAGGCCAGTCTTGAACTCCTGA...TCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTCTGAGGCACGAGAATTaGTTGAACCTGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: PHLIQEMITFRFLMKSIALRHEN*LNLGGR
Trigger: TCTGCCTCCCAGGTTCAAGCAATTCTCGTGCCTCAG...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp AGAAAGACAAATGTATATGTGCCAAGTAAGAAGACTGGAAGGAATTATGAACAGTGCCTGGCCGGAGACTaGCAGTCACCCTGCTTTGGA +
Preference number: 2 (lower is better)
Translates to: RKTNVYVPSKKTGRNYEQCLAGD*QSPCFG
Trigger: TCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCA...CTGTTCATAATTCCTTCCAGTCTTCTTACTTGGCACATATACATTTGTCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTTCCCCAGTGGCTTCGTaGGGATGTCCAGCTTATTCT +
Preference number: 2 (lower is better)
Translates to: PHLIQEMITFRFLMKSIASPVAS*GCPAYS
Trigger: AGAATAAGCTGGACATCCCCACGAAGCCACTGGGGA...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTAATCAGGTCCTGCAATaGCAGATAGGCCCCAAGTCC +
Preference number: 2 (lower is better)
Translates to: PHLIQEMITFRFLMKSIANQVLQ*QIGPKS
Trigger: GGACTTGGGGCCTATCTGCCATTGCAGGACCTGATT...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTTGCCAGGTTACACACTaGGCACTGAAGAGACCACAC +
Preference number: 2 (lower is better)
Translates to: PHLIQEMITFRFLMKSIACQVTH*ALKRPH
Trigger: GTGTGGTCTCTTCAGTGCCCAGTGTGTAACCTGGCA...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp GATGAAAAGCATAGCTCTCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGAGTTCAAGACTGGCCTaGGCAAAGTTTAAGACCGGC +
Preference number: 2 (lower is better)
Translates to: DEKHSSQVNTAAPLSIFWSSRLA*AKFKTG
Trigger: GCCGGTCTTAAACTTTGCCCAGGCCAGTCTTGAACT...CCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGAGAGCTATGCTTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp AGAAAGACAAATGTATATGTGCCAAGTAAGAAGACTGGAAGGAATTATGAACAGCCAGTGGGCCTGAGCTaGCCACCCTTATTTATGCTC +
Preference number: 2 (lower is better)
Translates to: RKTNVYVPSKKTGRNYEQPVGLS*PPLFML
Trigger: GAGCATAAATAAGGGTGGTCAGCTCAGGCCCACTGG...CTGTTCATAATTCCTTCCAGTCTTCTTACTTGGCACATATACATTTGTCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp AGAAAGACAAATGTATATGTGCCAAGTAAGAAGACTGGAAGGAATTATGAACAGGGTTGGGGGTTGTTCTaGACCAAATGGCCCCAGACT +
Preference number: 2 (lower is better)
Translates to: RKTNVYVPSKKTGRNYEQGWGLF*TKWPQT
Trigger: AGTCTGGGGCCATTTGGTGCAGAACAACCCCCAACC...CTGTTCATAATTCCTTCCAGTCTTCTTACTTGGCACATATACATTTGTCTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp AGAAAGACAAATGTATATGTGCCAAGTAAGAAGACTGGAAGGAATTATGAACAGTCTGGGAGAAGGTCATaGGGGCAGATGGGTTCTCTG +
Preference number: 2 (lower is better)
Translates to: RKTNVYVPSKKTGRNYEQSGRRS*GQMGSL
Trigger: CAGAGAACCCATCTGCCCCCATGACCTTCTCCCAGA...CTGTTCATAATTCCTTCCAGTCTTCTTACTTGGCACATATACATTTGTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTAAGCGTGTCCAATTTTaGCCAGAAATGGCCAGTGTT +
Preference number: 2 (lower is better)
Translates to: PHLIQEMITFRFLMKSIAKRVQF*PEMASV
Trigger: AACACTGGCCATTTCTGGGCAAAATTGGACACGCTT...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR GCA 90 bp TCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGGAGGAGTGGGTTTTATGCACTTTGTGCTTTGCTaGATAAAAAGGGAGTCTCAT +
Preference number: 2 (lower is better)
Translates to: SGKYSSTSKHILGGVGFMHFVLC*IKRESH
Trigger: ATGAGACTCCCTTTTTATGCAGCAAAGCACAAAGTG...CATAAAACCCACTCCTCCCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CCA 90 bp AGAAAGACAAATGTATATGTGCCAAGTAAGAAGACTGGAAGGAATTATGAACAGTGTGAAGATGGCCACTaGGTTGGGGGTTGTTCTGCA +
Preference number: 2 (lower is better)
Translates to: RKTNVYVPSKKTGRNYEQCEDGH*VGGCSA
Trigger: TGCAGAACAACCCCCAACCCAGTGGCCATCTTCACA...CTGTTCATAATTCCTTCCAGTCTTCTTACTTGGCACATATACATTTGTCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR TCA 90 bp AGAAAGACAAATGTATATGTGCCAAGTAAGAAGACTGGAAGGAATTATGAACAGCTAAAAATACAAGAATaGGCTGGGCGTGGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: RKTNVYVPSKKTGRNYEQLKIQE*AGRGGG
Trigger: CCCACCACCACGCCCAGCTCATTCTTGTATTTTTAG...CTGTTCATAATTCCTTCCAGTCTTCTTACTTGGCACATATACATTTGTCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp AGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCACACCTAGGCTGCGGGGGCATTaGCTCTGTGCCAGCCTACAC +
Preference number: 3 (lower is better)
Translates to: RAQVGPTLTTGPGQGRTPRLRGH*LCASLH
Trigger: GTGTAGGCTGGCACAGAGCAAATGCCCCCGCAGCCT...AGGTGTGCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp CACACCTGCCACTTCCTCAGCAGAGACCCTAGCGCGTaGGTCACTGCTGGCCCAGACTCCTTCCACGAGCAG +
Preference number: 3 (lower is better)
Translates to: HTCHFLSRDPSA*VTAGPDSFHEQ
Trigger: CTGCTCGTGGAAGGAGTCTGGGCCAGCAGTGACCCACGCGCTAGGGTCTCTGCTGAGGAAGTGGCAGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCGTCACACTTTGTGCTTaGCTGCATAAAAAGGGAGTC +
Preference number: 3 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRVTLCA*LHKKGV
Trigger: GACTCCCTTTTTATGCAGCAAAGCACAAAGTGTGAC...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 72 bp CACAAGCAAACACTGGCAGTCCCCACCCTTGCCCCATaGCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGA +
Preference number: 3 (lower is better)
Translates to: HKQTLAVPTLAP*LAGDCQSPCFG
Trigger: TCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCATGGGGCAAGGGTGGGGACTGCCAGTGTTTGCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp CCCATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTaGATGGAATGGATTGCTCTGCAGTGGGGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: PMPGRRLPVTLL*MEWIALQWGRR
Trigger: CCTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp AGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCACACCTATTTTGGTGGCCAGCTaGTTCATAACTCCTAGACAC +
Preference number: 3 (lower is better)
Translates to: RAQVGPTLTTGPGQGRTPILVAS*FITPRH
Trigger: GTGTCTAGGAGTTATGAACAAGCTGGCCACCAAAAT...AGGTGTGCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 72 bp CTTGCCCCATGCCTGGCCGGAGACTGCCAGTCACCCTaGTTTGGATGGAATGGATTGCTCTGCAGTGGGGCA +
Preference number: 3 (lower is better)
Translates to: LAPCLAGDCQSP*FGWNGLLCSGA
Trigger: TGCCCCACTGCAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCATGGGGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp TATGGCAGCAGGGGGCTCAGGCCATGTCTCAAGCTCTaGGAGAAGGTCATGGGGGCAGATGGGTTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: YGSRGLRPCLKL*EKVMGADGFSG
Trigger: CCCAGAGAACCCATCTGCCCCCATGACCTTCTCCCAGAGCTTGAGACATGGCCTGAGCCCCCTGCTGCCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 72 bp CTGCTGGCCCAGACTCCTTCCACGAGCAGGCGAGTGTaGAGGGCCACACCTCATCCAAGAGATGATCACGTT +
Preference number: 3 (lower is better)
Translates to: LLAQTPSTSRRV*RATPHPRDDHV
Trigger: AACGTGATCATCTCTTGGATGAGGTGTGGCCCTGCACACTCGCCTGCTCGTGGAAGGAGTCTGGGCCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp GGGCCAGCACTGTGCTGCAGTTGTGAAGATGGCCACTaGGTTGGGGGTTGTTCTGCACCAAATGGCCCCAGA +
Preference number: 3 (lower is better)
Translates to: GPALCCSCEDGH*VGGCSAPNGPR
Trigger: TCTGGGGCCATTTGGTGCAGAACAACCCCCAACCCAGTGGCCATCTTCACAACTGCAGCACAGTGCTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp TGCGCAGGCATGGCACTAAGTGTCCCATGGCACATTTaGCCCTCATGGAGGCCTCAAAAGGGCAGGACCAGC +
Preference number: 3 (lower is better)
Translates to: CAGMALSVPWHI*PSWRPQKGRTS
Trigger: GCTGGTCCTGCCCTTTTGAGGCCTCCATGAGGGCCAAATGTGCCATGGGACACTTAGTGCCATGCCTGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp CCACAGGTCTGCGCAGGCATGGCACTAAGTGTCCCATaGCACATTTGGCCCTCATGGAGGCCTCAAAAGGGC +
Preference number: 3 (lower is better)
Translates to: PQVCAGMALSVP*HIWPSWRPQKG
Trigger: GCCCTTTTGAGGCCTCCATGAGGGCCAAATGTGCCATGGGACACTTAGTGCCATGCCTGCGCAGACCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 72 bp GAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTaGTCTGCAGTGGGGCAGGAGGGGGAACTGAGGTCT +
Preference number: 3 (lower is better)
Translates to: ETASHPALDGMD*SAVGQEGELRS
Trigger: AGACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 72 bp TTGCACGCTCACCTGGCATTAGGGCCAGCACTGTGCTaGAGTTGTGAAGATGGCCACTGGGTTGGGGGTTGT +
Preference number: 3 (lower is better)
Translates to: LHAHLALGPALC*SCEDGHWVGGC
Trigger: ACAACCCCCAACCCAGTGGCCATCTTCACAACTGCAGCACAGTGCTGGCCCTAATGCCAGGTGAGCGTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 72 bp ACTTTGCACGCTCACCTGGCATTAGGGCCAGCACTGTaGTGCAGTTGTGAAGATGGCCACTGGGTTGGGGGT +
Preference number: 3 (lower is better)
Translates to: TLHAHLALGPAL*CSCEDGHWVGG
Trigger: ACCCCCAACCCAGTGGCCATCTTCACAACTGCAGCACAGTGCTGGCCCTAATGCCAGGTGAGCGTGCAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp GAGGGAACTGGAAGCCCCCAGGATTCTTTGCTCCTGTaGGAGTCATACCTCTTTCCCAGGCAGGAGAAGGGG +
Preference number: 3 (lower is better)
Translates to: EGTGSPQDSLLL*ESYLFPRQEKG
Trigger: CCCCTTCTCCTGCCTGGGAAAGAGGTATGACTCCCACAGGAGCAAAGAATCCTGGGGGCTTCCAGTTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp TTGTTCTGCACCAAATGGCCCCAGACTCCCTGTCAGTaGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACC +
Preference number: 3 (lower is better)
Translates to: LFCTKWPQTPCQ*LLVAASGPELT
Trigger: GGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGGAGTCTGGGGCCATTTGGTGCAGAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp AGATGGCCACTGGGTTGGGGGTTGTTCTGCACCAAATaGCCCCAGACTCCCTGTCAGTGGCTACTTGTTGCA +
Preference number: 3 (lower is better)
Translates to: RWPLGWGLFCTK*PQTPCQWLLVA
Trigger: TGCAACAAGTAGCCACTGACAGGGAGTCTGGGGCCATTTGGTGCAGAACAACCCCCAACCCAGTGGCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp ATGGCACTAAGTGTCCCATGGCACATTTGGCCCTCATaGAGGCCTCAAAAGGGCAGGACCAGCACCCTCTTC +
Preference number: 3 (lower is better)
Translates to: MALSVPWHIWPS*RPQKGRTSTLF
Trigger: GAAGAGGGTGCTGGTCCTGCCCTTTTGAGGCCTCCATGAGGGCCAAATGTGCCATGGGACACTTAGTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp TTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGGGAGGCACGAGAATTGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: LNQVLQWQIGPKSYGSRGRHENC*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCAATTCTCGTGCCT...CCCCCTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTGCCAGTCACCCTGCTTaGGATGGAATGGATTGCTCT +
Preference number: 3 (lower is better)
Translates to: PCQWLLVAASGPELTTLIASHPA*DGMDCS
Trigger: AGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGC...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp GTACATGATGTGGTCAAATTAACAAGAGGCAGAGGCCGGGTAAGTGGCTCACGCCCTGTCAGTGGCTACTaGTTGCAGCCAGTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: VHDVVKLTRGRGRVSGSRPVSGY*LQPVGL
Trigger: CAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGG...GCGTGAGCCACTTACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 72 bp GAATGGATTGCTCTGCAGTGGGGCAGGAGGGGGAACTaGGGTCTTATTGACAATGCCTGGTGGTGGCTGTCT +
Preference number: 3 (lower is better)
Translates to: EWIALQWGRRGN*GLIDNAWWWLS
Trigger: AGACAGCCACCACCAGGCATTGTCAATAAGACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 72 bp CACAGTCTGACAGGTCCTAAGATAGGACTTCTGTGCTaGCTCCAGACAGTGCAGTCAGCACAGGCTCTGAGG +
Preference number: 3 (lower is better)
Translates to: HSLTGPKIGLLC*LQTVQSAQALR
Trigger: CCTCAGAGCCTGTGCTGACTGCACTGTCTGGAGTCAGCACAGAAGTCCTATCTTAGGACCTGTCAGACTGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 72 bp GTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTaGCCACCCTTATTTATGCTCCTGATGTGCAGCCTT +
Preference number: 3 (lower is better)
Translates to: VSGYLLQPVGLS*PPLFMLLMCSL
Trigger: AAGGCTGCACATCAGGAGCATAAATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp AGAGCCCTTCTCCTCACACCTAAACCCTCTGGTGAATaGAGAAAAGCTCGGGTCAGCCAACCTCAGACCATC +
Preference number: 3 (lower is better)
Translates to: RALLLTPKPSGE*RKARVSQPQTI
Trigger: GATGGTCTGAGGTTGGCTGACCCGAGCTTTTCTCCATTCACCAGAGGGTTTAGGTGTGAGGAGAAGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp GGCACACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATGAGCCTGCTCAGACCACTGGGTTGGGGGTaGTTCTGCACCAAATGGCCC +
Preference number: 3 (lower is better)
Translates to: GTQGTPKFASPFKMSLLRPLGWG*FCTKWP
Trigger: GGGCCATTTGGTGCAGAACAACCCCCAACCCAGTGG...TCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 72 bp CAACCAGGCCAGAAGATGACCTTGATAGCTGAGCACTaGCCCTTCATCAGCTGTGTGTCCTTACGACCTCCT +
Preference number: 3 (lower is better)
Translates to: QPGQKMTLIAEH*PFISCVSLRPP
Trigger: AGGAGGTCGTAAGGACACACAGCTGATGAAGGGTCAGTGCTCAGCTATCAAGGTCATCTTCTGGCCTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 72 bp TCTTCTACGGAGGAAGGAACGGGCACAGCAGGTACATaGTGTGGTCAAATTAACAAGAGGCAGAGGCCGGGT +
Preference number: 3 (lower is better)
Translates to: SSTEEGTGTAGT*CGQINKRQRPG
Trigger: ACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTACCTGCTGTGCCCGTTCCTTCCTCCGTAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 72 bp TGCATAAAAAGGGAGTCTCATCATGATCCTCAGGCCTaGTGTGCACACCTGATGGGCATAGCAGCGTTTGCG +
Preference number: 3 (lower is better)
Translates to: CIKRESHHDPQA*CAHLMGIAAFA
Trigger: CGCAAACGCTGCTATGCCCATCAGGTGTGCACAGCAGGCCTGAGGATCATGATGAGACTCCCTTTTTATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp ATTGGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATaGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGGG +
Preference number: 3 (lower is better)
Translates to: IGRRELLNQVLQ*QIGPKSYGSRG
Trigger: CCCCCTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 72 bp CCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCTaGATAAAAAGGGAGTCTCATCATGATCCTCAGGCC +
Preference number: 3 (lower is better)
Translates to: PGRPRLSHFVLC*IKRESHHDPQA
Trigger: GGCCTGAGGATCATGATGAGACTCCCTTTTTATGCAGCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp GCTGAGAACATAAGCGTGTCCAATTTTGCCCAGAAATaGCCAGTGTTGTACCTGGGAAGAGGCAGAGCCCTT +
Preference number: 3 (lower is better)
Translates to: AENISVSNFAQK*PVLYLGRGRAL
Trigger: AAGGGCTCTGCCTCTTCCCAGGTACAACACTGGCCATTTCTGGGCAAAATTGGACACGCTTATGTTCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CCA 72 bp CCTCCCTTTCTGAGGCCTTCTGTATGTGATGTCATTTaGTGGGTGGCTAAAGTTGCTAGAAGTCTGGCCACC +
Preference number: 3 (lower is better)
Translates to: PPFLRPSVCDVI*WVAKVARSLAT
Trigger: GGTGGCCAGACTTCTAGCAACTTTAGCCACCCACCAAATGACATCACATACAGAAGGCCTCAGAAAGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp GGCACACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATGAGCCTGCTCAGACAGAAATGGCCAGTGTaGTACCTGGGAAGAGGCAGA +
Preference number: 3 (lower is better)
Translates to: GTQGTPKFASPFKMSLLRQKWPV*YLGRGR
Trigger: TCTGCCTCTTCCCAGGTACAACACTGGCCATTTCTG...TCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp GGCACACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATGAGCCTGCTCAGAGGAACTGAGGTCTTATaGACAATGCCTGGTGGTGGC +
Preference number: 3 (lower is better)
Translates to: GTQGTPKFASPFKMSLLRGTEVL*TMPGGG
Trigger: GCCACCACCAGGCATTGTCAATAAGACCTCAGTTCC...TCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGGTTGGAAGAGCCTTaGGAATTAAAGAGTCCTATG +
Preference number: 3 (lower is better)
Translates to: AVKSGPAMADRPQVLWQQGLEEP*ELKSPM
Trigger: CATAGGACTCTTTAATTCCAAAGGCTCTTCCAACCC...CTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 72 bp CTTTGTGCTTTGCTGCATAAAAAGGGAGTCTCATCATaGTCCTCAGGCCTGCTGTGCACACCTGATGGGCAT +
Preference number: 3 (lower is better)
Translates to: LCALLHKKGVSS*SSGLLCTPDGH
Trigger: ATGCCCATCAGGTGTGCACAGCAGGCCTGAGGATCATGATGAGACTCCCTTTTTATGCAGCAAAGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 72 bp GCACCTCTAAGCATATTCTGGGAGGAGTGGGTTTTATaGGGAAGGCACACAAGGAACGCCCAAATTTGCAAG +
Preference number: 3 (lower is better)
Translates to: APLSIFWEEWVL*GRHTRNAQICK
Trigger: CTTGCAAATTTGGGCGTTCCTTGTGTGCCTTCCTCATAAAACCCACTCCTCCCAGAATATGCTTAGAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR GCA 72 bp ACATTCATTTCACAAACTCCTAGCACACCCAAACCATaGCAGGTTACACACTGGGCACTGAAGAGACCACAC +
Preference number: 3 (lower is better)
Translates to: TFISQTPSTPKP*QVTHWALKRPH
Trigger: GTGTGGTCTCTTCAGTGCCCAGTGTGTAACCTGGCATGGTTTGGGTGTGCTAGGAGTTTGTGAAATGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp GATGAAAAGCATAGCTCTCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGAAGATGGCCACTGGGTaGGGGGTTGTTCTGCACCAA +
Preference number: 3 (lower is better)
Translates to: DEKHSSQVNTAAPLSIFWKMATG*GVVLHQ
Trigger: TTGGTGCAGAACAACCCCCAACCCAGTGGCCATCTT...CCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGAGAGCTATGCTTTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 72 bp TGTGCACACCTGATGGGCATAGCAGCGTTTGCGTCTTaGAAACATTCATTTCACAAACTCCTAGCACACCCA +
Preference number: 3 (lower is better)
Translates to: CAHLMGIAAFAS*KHSFHKLLAHP
Trigger: TGGGTGTGCTAGGAGTTTGTGAAATGAATGTTTTCAAGACGCAAACGCTGCTATGCCCATCAGGTGTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp GATGAAAAGCATAGCTCTCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGAGGGTGACGCCAATTTaGGTGGCCAGCTTGTTCATA +
Preference number: 3 (lower is better)
Translates to: DEKHSSQVNTAAPLSIFWRVTPI*VASLFI
Trigger: TATGAACAAGCTGGCCACCAAAATTGGCGTCACCCT...CCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGAGAGCTATGCTTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR TCA 72 bp CACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATaGGCCTGCTCAGAATTGCTGTTTATTCCACAGGTC +
Preference number: 3 (lower is better)
Translates to: HKERPNLQVPLK*ACSELLFIPQV
Trigger: GACCTGTGGAATAAACAGCAATTCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR-3UTR CAA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTGAAGAGACCACACATTaGTCAGTTTCCGAAACTCTA +
Preference number: 3 (lower is better)
Translates to: PHLIQEMITFRFLMKSIAEETTH*SVSETL
Trigger: TAGAGTTTCGGAAACTGACAAATGTGTGGTCTCTTC...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCCGTCGTCGCCAGCCATaGCGTGGTACAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRRRRQP*RGTGPA
Trigger: TGCTGGACCTGTACCACGCCATGGCTGGCGACGACG...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCTGCCTGGCCGGAGACTaGCAGTCACCCTGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRCLAGD*QSPCFG
Trigger: TCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCA...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCCCTCTGTCTCAGTGCTaGGCCCCAAATGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRPLSQC*APNGSA
Trigger: TGCTGACCCATTTGGGGCTCAGCACTGAGACAGAGG...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GGTCACTGCTGGCCCAGACTCCTTCCACGAGCAGGCGAGTGTGCAGGGCCACACCCCTTCAGCTGCCCATaGGGGCACAGGTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GHCWPRLLPRAGECAGPHPFSCP*GHRWAP
Trigger: TGGGGCCCACCTGTGCCCTCATGGGCAGCTGAAGGG...GTGTGGCCCTGCACACTCGCCTGCTCGTGGAAGGAGTCTGGGCCAGCAGTGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCTGCAGCCAGTGGGCCTaGGCTGACCACCCTTATTTA +
Preference number: 4 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRCSQWA*ADHPYL
Trigger: TAAATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCA...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp GGTCACTGCTGGCCCAGACTCCTTCCACGAGCAGGCGAGTGTGCAGGGCCACACACAGGACAGCGCTGGTaGGCACCCAGGGTGACGCCA +
Preference number: 4 (lower is better)
Translates to: GHCWPRLLPRAGECAGPHTGQRW*APRVTP
Trigger: TGGCGTCACCCTGGGTGCCCACCAGCGCTGTCCTGT...GTGTGGCCCTGCACACTCGCCTGCTCGTGGAAGGAGTCTGGGCCAGCAGTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp AGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCACACCTGGCACGAGAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RAQVGPTLTTGPGQGRTPGTRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTCTCGTGCC...AGGTGTGCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp GGTCACTGCTGGCCCAGACTCCTTCCACGAGCAGGCGAGTGTGCAGGGCCACACGCAGGGCCGCACACCTaGCACTTCCTCAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GHCWPRLLPRAGECAGPHAGPHT*HFLSRD
Trigger: GTCTCTGCTGAGGAAGTGGCAGGTGTGCGGCCCTGC...GTGTGGCCCTGCACACTCGCCTGCTCGTGGAAGGAGTCTGGGCCAGCAGTGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp AGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCACACCTGATGGTGGAGGGAACTaGAAGCCCCCAGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: RAQVGPTLTTGPGQGRTPDGGGN*KPPGFF
Trigger: AAAGAATCCTGGGGGCTTCCAGTTCCCTCCACCATC...AGGTGTGCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp AGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCACACCTCCAGTCACCCTGCTTTaGATGGAATGGATTGCTCTG +
Preference number: 4 (lower is better)
Translates to: RAQVGPTLTTGPGQGRTPPVTLL*MEWIAL
Trigger: CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGG...AGGTGTGCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GGTCACTGCTGGCCCAGACTCCTTCCACGAGCAGGCGAGTGTGCAGGGCCACACGGCAGGAGGGGGAACTaGGGTCTTATTGACAATGCC +
Preference number: 4 (lower is better)
Translates to: GHCWPRLLPRAGECAGPHGRRGN*GLIDNA
Trigger: GGCATTGTCAATAAGACCTCAGTTCCCCCTCCTGCC...GTGTGGCCCTGCACACTCGCCTGCTCGTGGAAGGAGTCTGGGCCAGCAGTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCAAGCGTGTCCAATTTTaGCCAGAAATGGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRKRVQF*PEMASV
Trigger: AACACTGGCCATTTCTGGGCAAAATTGGACACGCTT...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GTACATGATGTGGTCAAATTAACAAGAGGCAGAGGCCGGGTAAGTGGCTCACGCCGGCGAACGGGGAGCTaGGTTCGGCGAGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VHDVVKLTRGRGRVSGSRRRTGS*VRRAGG
Trigger: GCCCCCTGCTCGCCGAACTCAGCTCCCCGTTCGCCG...GCGTGAGCCACTTACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GGTGGCGTGTGCCTGTCATCCCAGCAACTCGGGCTGAAGTGGGAGGATTGCTTGGAGAGTGAGGGCCCCTaGCACTCCTGCTTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GGVCLSSQQLGLKWEDCLESEGP*HSCLSC
Trigger: ACAGCTCAAGCAGGAGTGTCAGGGGCCCTCACTCTC...CAAGCAATCCTCCCACTTCAGCCCGAGTTGCTGGGATGACAGGCACACGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGTACAGGTCCAGCATaGAGAGCGGCGCGGACGCGG +
Preference number: 4 (lower is better)
Translates to: AVKSGPAMADRPQVLWQQGTGPA*RAARTR
Trigger: CCGCGTCCGCGCCGCTCTTCATGCTGGACCTGTACC...CTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GGTGGCGTGTGCCTGTCATCCCAGCAACTCGGGCTGAAGTGGGAGGATTGCTTGAGGCAGAGGTTGCAGTaGGCCAGGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: GGVCLSSQQLGLKWEDCLRQRLQ*ARIAPL
Trigger: CAGTGGTGCAATCCTGGCTCACTGCAACCTCTGCCT...CAAGCAATCCTCCCACTTCAGCCCGAGTTGCTGGGATGACAGGCACACGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGCCCACCCTTGCCCCATaGCTGGCCGGAGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: AVKSGPAMADRPQVLWQQPTLAP*LAGDCQ
Trigger: CTGGCAGTCTCCGGCCAGGCATGGGGCAAGGGTGGG...CTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp TTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGGGCCCTTGCCCCATGCCTaGCCGGAGACTGCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LNQVLQWQIGPKSYGSRGPLPHA*PETASH
Trigger: GTGACTGGCAGTCTCCGGCCAGGCATGGGGCAAGGG...CCCCCTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 72 bp GGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATaGCTCTGCAGTGGGGCAGGAGGGGGAACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: GDCQSPCFGWNG*LCSGAGGGTEV
Trigger: GACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 72 bp CTGCGCAGGCATGGCACTAAGTGTCCCATGGCACATTaGGCCCTCATGGAGGCCTCAAAAGGGCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: LRRHGTKCPMAH*ALMEASKGQDQ
Trigger: CTGGTCCTGCCCTTTTGAGGCCTCCATGAGGGCCAAATGTGCCATGGGACACTTAGTGCCATGCCTGCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGGTCATCCCAACACTTTaGGAGGCCGGGCGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALVIPTL*EAGRVD
Trigger: ATCCACCCGCCCGGCCTCCCAAAGTGTTGGGATGAC...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp GGTGGCGTGTGCCTGTCATCCCAGCAACTCGGGCTGAAGTGGGAGGATTGCTTGCTGAGGCACGAGAATTaGTTGAACCTGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGVCLSSQQLGLKWEDCLLRHEN*LNLGGR
Trigger: TCTGCCTCCCAGGTTCAAGCAATTCTCGTGCCTCAG...CAAGCAATCCTCCCACTTCAGCCCGAGTTGCTGGGATGACAGGCACACGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGGGGCCAGCACTGTGCTaGAGTTGTGAAGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALGPALC*SCEDGH
Trigger: GTGGCCATCTTCACAACTGCAGCACAGTGCTGGCCC...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp GGTGGCGTGTGCCTGTCATCCCAGCAACTCGGGCTGAAGTGGGAGGATTGCTTGGCCTACACTACATGTTaGAGCTGCTGGTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: GGVCLSSQQLGLKWEDCLAYTTC*SCWSCL
Trigger: GAGGCAAGACCAGCAGCTCCAACATGTAGTGTAGGC...CAAGCAATCCTCCCACTTCAGCCCGAGTTGCTGGGATGACAGGCACACGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 72 bp CAGCACTGTGCTGCAGTTGTGAAGATGGCCACTGGGTaGGGGGTTGTTCTGCACCAAATGGCCCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: QHCAAVVKMATG*GVVLHQMAPDS
Trigger: GGAGTCTGGGGCCATTTGGTGCAGAACAACCCCCAACCCAGTGGCCATCTTCACAACTGCAGCACAGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GGTGGCGTGTGCCTGTCATCCCAGCAACTCGGGCTGAAGTGGGAGGATTGCTTGGCACCCTGGACCAAATaGGAAGAATCCCAGAACACA +
Preference number: 4 (lower is better)
Translates to: GGVCLSSQQLGLKWEDCLAPWTK*EESQNT
Trigger: TGTGTTCTGGGATTCTTCTCATTTGGTCCAGGGTGC...CAAGCAATCCTCCCACTTCAGCCCGAGTTGCTGGGATGACAGGCACACGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTGCCCCCAGGATTCTTTaGTCCTGTGGGAGTCATACC +
Preference number: 4 (lower is better)
Translates to: PCQWLLVAASGPELTTLIAPRIL*SCGSHT
Trigger: GGTATGACTCCCACAGGAGCAAAGAATCCTGGGGGC...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp TTGCTAGAAGTCTGGCCACCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCACGAGCAGGCGAGTGTaGAGGGCCACACCTCATCCA +
Preference number: 4 (lower is better)
Translates to: LLEVWPPGRPRLSHFVLCTSRRV*RATPHP
Trigger: TGGATGAGGTGTGGCCCTGCACACTCGCCTGCTCGT...GCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGGTGGCCAGACTTCTAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTAATACAAGAATGAGCTaGGCGTGGTGGTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PCQWLLVAASGPELTTLINTRMS*AWWWAP
Trigger: AGGGGCCCACCACCACGCCCAGCTCATTCTTGTATT...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp TTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGGGTTCTGTGCTGAGGCCTaGAGGCCCTGTCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LNQVLQWQIGPKSYGSRGFCAEA*RPCPGS
Trigger: TGAACCAGGACAGGGCCTCCAGGCCTCAGCACAGAA...CCCCCTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTCCATGTCTCAAGCTCTaGGAGAAGGTCATGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PCQWLLVAASGPELTTLIPCLKL*EKVMGA
Trigger: TGCCCCCATGACCTTCTCCCAGAGCTTGAGACATGG...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp GTACATGATGTGGTCAAATTAACAAGAGGCAGAGGCCGGGTAAGTGGCTCACGCCGCGTGGGTCACTGCTaGCCCAGACTCCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: VHDVVKLTRGRGRVSGSRRVGHC*PRLLPR
Trigger: TCGTGGAAGGAGTCTGGGCCAGCAGTGACCCACGCG...GCGTGAGCCACTTACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 72 bp GGACAGCGCTGGTGGGCACCCAGGGTGACGCCAATTTaGGTGGCCAGCTTGTTCATAACTCCTAGACACAAG +
Preference number: 4 (lower is better)
Translates to: GQRWWAPRVTPI*VASLFITPRHK
Trigger: CTTGTGTCTAGGAGTTATGAACAAGCTGGCCACCAAAATTGGCGTCACCCTGGGTGCCCACCAGCGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp AGAAAGGGGACTTGTCCTGACACCAAGTCAGTGGCTGAGTTGGAACCAGAATACAGTAGGCACCGAGAGTaGGGGCCCCTGACACTCCTG +
Preference number: 4 (lower is better)
Translates to: RKGTCPDTKSVAELEPEYSRHRE*GPLTLL
Trigger: CAGGAGTGTCAGGGGCCCTCACTCTCGGTGCCTACT...GTATTCTGGTTCCAACTCAGCCACTGACTTGGTGTCAGGACAAGTCCCCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GTACATGATGTGGTCAAATTAACAAGAGGCAGAGGCCGGGTAAGTGGCTCACGCGGCTGCAGTGAGCCATaGCACTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: VHDVVKLTRGRGRVSGSRGCSEP*HCHCTP
Trigger: TGGAGTGCAGTGGCAGTGTCATGGCTCACTGCAGCC...GCGTGAGCCACTTACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp AGAGCCCTTCTCCTCACACCTAAACCCTCTGGTGAATGGAGAAAAGCTCGGGTCAGGTTGAGGCTGCAGTaGGCCATGACACTGCCACTG +
Preference number: 4 (lower is better)
Translates to: RALLLTPKPSGEWRKARVRLRLQ*AMTLPL
Trigger: CAGTGGCAGTGTCATGGCTCACTGCAGCCTCAACCT...GACCCGAGCTTTTCTCCATTCACCAGAGGGTTTAGGTGTGAGGAGAAGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGTCTGAGGCTGCTGTGTaGCTTAGGCCACCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALSEAAV*LRPPKC
Trigger: ACACTTTGGTGGCCTAAGGCACACAGCAGCCTCAGA...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp TTGCTAGAAGTCTGGCCACCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCCTGGTGGTGGCTGTCTaGAGTTCTGTGCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLEVWPPGRPRLSHFVLCLVVAV*SSVLRP
Trigger: AGGCCTCAGCACAGAACTGCAGACAGCCACCACCAG...GCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGGTGGCCAGACTTCTAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTAGCACACCCAAACCATaGCAGGTTACACACTGGGCA +
Preference number: 4 (lower is better)
Translates to: PCQWLLVAASGPELTTLISTPKP*QVTHWA
Trigger: TGCCCAGTGTGTAACCTGGCATGGTTTGGGTGTGCT...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp AGAGCCCTTCTCCTCACACCTAAACCCTCTGGTGAATGGAGAAAAGCTCGGGTCTCCTCAGGCCTGCTGTaGACACCTGATGGGCATAGC +
Preference number: 4 (lower is better)
Translates to: RALLLTPKPSGEWRKARVSSGLL*TPDGHS
Trigger: GCTATGCCCATCAGGTGTGCACAGCAGGCCTGAGGA...GACCCGAGCTTTTCTCCATTCACCAGAGGGTTTAGGTGTGAGGAGAAGGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGGTATGGTGGCGTGTaGCTGTCATCCCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: AVKSGPAMADRPQVLWQQGYGGV*LSSQQL
Trigger: GAGTTGCTGGGATGACAGGCACACGCCACCATACCC...CTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGCTGTTCTGAGGGCTaGGACTGTCAGCCAATCCGT +
Preference number: 4 (lower is better)
Translates to: AVKSGPAMADRPQVLWQQGCSEG*DCQPIR
Trigger: ACGGATTGGCTGACAGTCCCAGCCCTCAGAACAGCC...CTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp TTTGGATGGAATGGATTGCTCTGCAGTGGGGCAGGAGGGGGAACTGAGGTCTTAGGCCAGTGTTGTACCTaGGAAGAGGCAGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: FGWNGLLCSGAGGGTEVLGQCCT*EEAEPF
Trigger: GAAGGGCTCTGCCTCTTCCCAGGTACAACACTGGCC...TAAGACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGGGCAGATGGGTTCTCTaGGTTGGAAGAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALGRWVL*VGRAFG
Trigger: TCCAAAGGCTCTTCCAACCCAGAGAACCCATCTGCC...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp TTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGGGTCTGGGAGAAGGTCATaGGGGCAGATGGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LNQVLQWQIGPKSYGSRGSGRRS*GQMGSL
Trigger: CAGAGAACCCATCTGCCCCCATGACCTTCTCCCAGA...CCCCCTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp TTTGGATGGAATGGATTGCTCTGCAGTGGGGCAGGAGGGGGAACTGAGGTCTTAGCCTTGAATGCATCCTaGGCTGTGGGAGGCAACCAG +
Preference number: 4 (lower is better)
Translates to: FGWNGLLCSGAGGGTEVLALNAS*AVGGNQ
Trigger: CTGGTTGCCTCCCACAGCCCAGGATGCATTCAAGGC...TAAGACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGCAGACTCCCTGTCAGTaGCTACTTGTTGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALQTPCQ*LLVAAS
Trigger: ACTGGCTGCAACAAGTAGCCACTGACAGGGAGTCTG...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp TCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGGAGGAGTGGGTTTTATGAGGCCGGGGCTGTTCTaGGGGCTGGGACTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SGKYSSTSKHILGGVGFMRPGLF*GLGLSA
Trigger: GGCTGACAGTCCCAGCCCTCAGAACAGCCCCGGCCT...CATAAAACCCACTCCTCCCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp TTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGGGGAGGCCTTCTGTATGTaGTGTCATTTGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LNQVLQWQIGPKSYGSRGEAFCM*CHLVGG
Trigger: GCCACCCACCAAATGACATCACATACAGAAGGCCTC...CCCCCTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp TTTGGATGGAATGGATTGCTCTGCAGTGGGGCAGGAGGGGGAACTGAGGTCTTAGGTTGGGGGTTGTTCTaGACCAAATGGCCCCAGACT +
Preference number: 4 (lower is better)
Translates to: FGWNGLLCSGAGGGTEVLGWGLF*TKWPQT
Trigger: AGTCTGGGGCCATTTGGTGCAGAACAACCCCCAACC...TAAGACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGAGTTCAAGACTGGCCTaGGCAAAGTTTAAGACCGGC +
Preference number: 4 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALSSRLA*AKFKTG
Trigger: GCCGGTCTTAAACTTTGCCCAGGCCAGTCTTGAACT...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp AGAGCCCTTCTCCTCACACCTAAACCCTCTGGTGAATGGAGAAAAGCTCGGGTCGTCCCATGGCACATTTaGCCCTCATGGAGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: RALLLTPKPSGEWRKARVVPWHI*PSWRPQ
Trigger: TTGAGGCCTCCATGAGGGCCAAATGTGCCATGGGAC...GACCCGAGCTTTTCTCCATTCACCAGAGGGTTTAGGTGTGAGGAGAAGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GCATCGCCCGGTCCCTATGTAAAGACAAAGAAACAGGACTTTGCACGCTCACCTAAAGGACCAGAAGCCTaGCAGGAAGTAGGCACCGAG +
Preference number: 4 (lower is better)
Translates to: ASPGPYVKTKKQDFARSPKGPEA*QEVGTE
Trigger: CTCGGTGCCTACTTCCTGTCAGGCTTCTGGTCCTTT...AGGTGAGCGTGCAAAGTCCTGTTTCTTTGTCTTTACATAGGGACCGGGCGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTCAGAACACACTGTGCTaGGAACATAAGCGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: PCQWLLVAASGPELTTLIQNTLC*EHKRVQ
Trigger: TTGGACACGCTTATGTTCTCAGCACAGTGTGTTCTG...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GGTGGCGTGTGCCTGTCATCCCAGCAACTCGGGCTGAAGTGGGAGGATTGCTTGGCAAGGGAATACACATaGCATAAAATATCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GGVCLSSQQLGLKWEDCLAREYT*HKISPV
Trigger: CACTGGGGATATTTTATGTCATGTGTATTCCCTTGC...CAAGCAATCCTCCCACTTCAGCCCGAGTTGCTGGGATGACAGGCACACGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp TTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGGGGGAGGAGTGGGTTTTATaGGGAAGGCACACAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LNQVLQWQIGPKSYGSRGEEWVL*GRHTRN
Trigger: GTTCCTTGTGTGCCTTCCTCATAAAACCCACTCCTC...CCCCCTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTCTTATTGACAATGCCTaGTGGTGGCTGTCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: PCQWLLVAASGPELTTLILIDNA*WWLSAV
Trigger: AACTGCAGACAGCCACCACCAGGCATTGTCAATAAG...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTTCACCCTGCTTTGGATaGAATGGATTGCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PCQWLLVAASGPELTTLISPCFG*NGLLCS
Trigger: ACTGCAGAGCAATCCATTCCATCCAAAGCAGGGTGA...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp TTGCTAGAAGTCTGGCCACCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCAATCAGGTCCTGCAATaGCAGATAGGCCCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: LLEVWPPGRPRLSHFVLCNQVLQ*QIGPKS
Trigger: GGACTTGGGGCCTATCTGCCATTGCAGGACCTGATT...GCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGGTGGCCAGACTTCTAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGTGCCAGGTTACACACTaGGCACTGAAGAGACCACAC +
Preference number: 4 (lower is better)
Translates to: AVKSGPAMADRPQVLWQQCQVTH*ALKRPH
Trigger: GTGTGGTCTCTTCAGTGCCCAGTGTGTAACCTGGCA...CTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp TTGCTAGAAGTCTGGCCACCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCTGTGAAGATGGCCACTaGGTTGGGGGTTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLEVWPPGRPRLSHFVLCCEDGH*VGGCSA
Trigger: TGCAGAACAACCCCCAACCCAGTGGCCATCTTCACA...GCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGGTGGCCAGACTTCTAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 72 bp TGGGCACCCAGGGTGACGCCAATTTTGGTGGCCAGCTaGTTCATAACTCCTAGACACAAGCAAACACTGGCA +
Preference number: 4 (lower is better)
Translates to: WAPRVTPILVAS*FITPRHKQTLA
Trigger: TGCCAGTGTTTGCTTGTGTCTAGGAGTTATGAACAAGCTGGCCACCAAAATTGGCGTCACCCTGGGTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp TTTGGATGGAATGGATTGCTCTGCAGTGGGGCAGGAGGGGGAACTGAGGTCTTACTAAAAATACAAGAATaGGCTGGGCGTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: FGWNGLLCSGAGGGTEVLLKIQE*AGRGGG
Trigger: CCCACCACCACGCCCAGCTCATTCTTGTATTTTTAG...TAAGACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp AGAGCCCTTCTCCTCACACCTAAACCCTCTGGTGAATGGAGAAAAGCTCGGGTCGAACTGAGGTCTTATTaGCAATGCCTGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RALLLTPKPSGEWRKARVELRSY*QCLVVA
Trigger: AGCCACCACCAGGCATTGTCAATAAGACCTCAGTTC...GACCCGAGCTTTTCTCCATTCACCAGAGGGTTTAGGTGTGAGGAGAAGGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp AGAGCCCTTCTCCTCACACCTAAACCCTCTGGTGAATGGAGAAAAGCTCGGGTCGATGACCTTGATAGCTaGGCACTGACCCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: RALLLTPKPSGEWRKARVDDLDS*ALTLHQ
Trigger: CTGATGAAGGGTCAGTGCTCAGCTATCAAGGTCATC...GACCCGAGCTTTTCTCCATTCACCAGAGGGTTTAGGTGTGAGGAGAAGGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTCCTTATTTATGCTCCTaGTGTGCAGCCTTGAATGCA +
Preference number: 4 (lower is better)
Translates to: PCQWLLVAASGPELTTLIPYLCS*CAALNA
Trigger: TGCATTCAAGGCTGCACATCAGGAGCATAAATAAGG...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGCAAGTCCCTTTAAAATaGGCCTGCTCAGAATTGCTG +
Preference number: 4 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALQVPLK*ACSELL
Trigger: CAGCAATTCTGAGCAGGCTCATTTTAAAGGGACTTG...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp GTACATGATGTGGTCAAATTAACAAGAGGCAGAGGCCGGGTAAGTGGCTCACGCTTGGATGGAATGGATTaGTCTGCAGTGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VHDVVKLTRGRGRVSGSRLDGMD*SAVGQE
Trigger: CTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAA...GCGTGAGCCACTTACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp TTGCTAGAAGTCTGGCCACCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCATAAAATATCCCCAGTaGCCAGGCACGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LLEVWPPGRPRLSHFVLCIKYPQ*PGTVAH
Trigger: ATGAGCCACCGTGCCTGGCCACTGGGGATATTTTAT...GCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGGTGGCCAGACTTCTAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp AACTCTACTGCCCAGTATTGGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATGAGAGACCCTAGCGCGTaGGTCACTGCTGGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: NSTAQYWKKRAVKSGPAMRDPSA*VTAGPD
Trigger: GTCTGGGCCAGCAGTGACCCACGCGCTAGGGTCTCT...CATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAATACTGGGCAGTAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GCATCGCCCGGTCCCTATGTAAAGACAAAGAAACAGGACTTTGCACGCTCACCTCCTGACACTCCTGCTTaGGCTGTGACAGCATTTAAG +
Preference number: 4 (lower is better)
Translates to: ASPGPYVKTKKQDFARSPPDTPA*AVTAFK
Trigger: CTTAAATGCTGTCACAGCTCAAGCAGGAGTGTCAGG...AGGTGAGCGTGCAAAGTCCTGTTTCTTTGTCTTTACATAGGGACCGGGCGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp TTGCTAGAAGTCTGGCCACCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCTTACACACTGGGCACTaGAGAGACCACACATTTGTC +
Preference number: 4 (lower is better)
Translates to: LLEVWPPGRPRLSHFVLCLHTGH*RDHTFV
Trigger: GACAAATGTGTGGTCTCTTCAGTGCCCAGTGTGTAA...GCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGGTGGCCAGACTTCTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GGCACACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATGAGCCTGCTCAGAACTGTGCTGCAGTTGTaGAGATGGCCACTGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GTQGTPKFASPFKMSLLRTVLQL*RWPLGW
Trigger: CCAACCCAGTGGCCATCTTCACAACTGCAGCACAGT...TCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp AGGCCCTGTCCTGGTTCAGTGGGAAAGGTACGTAGGTTGATTACTGACATGAGCGACTGCCAGTCACCCTaGTTTGGATGGAATGGATTG +
Preference number: 4 (lower is better)
Translates to: RPCPGSVGKVRRLITDMSDCQSP*FGWNGL
Trigger: CAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTC...GCTCATGTCAGTAATCAACCTACGTACCTTTCCCACTGAACCAGGACAGGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGATTCTTTGCTCCTGTaGGAGTCATACCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AVKSGPAMADRPQVLWQQDSLLL*ESYLFP
Trigger: GGGAAAGAGGTATGACTCCCACAGGAGCAAAGAATC...CTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp AGAAAGGGGACTTGTCCTGACACCAAGTCAGTGGCTGAGTTGGAACCAGAATACGTGCTGAGCCCCAAATaGGTCAGCATGGTAGAGATG +
Preference number: 4 (lower is better)
Translates to: RKGTCPDTKSVAELEPEYVLSPK*VSMVEM
Trigger: CATCTCTACCATGCTGACCCATTTGGGGCTCAGCAC...GTATTCTGGTTCCAACTCAGCCACTGACTTGGTGTCAGGACAAGTCCCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGGTATGTGATGTCATTTaGTGGGTGGCTAAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALVCDVI*WVAKVA
Trigger: AGCAACTTTAGCCACCCACCAAATGACATCACATAC...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGAAAATTAGCTGGGTATaGTGGCGTGTGCCTGTCATC +
Preference number: 4 (lower is better)
Translates to: AVKSGPAMADRPQVLWQQKISWV*WRVPVI
Trigger: GATGACAGGCACACGCCACCATACCCAGCTAATTTT...CTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp GTACATGATGTGGTCAAATTAACAAGAGGCAGAGGCCGGGTAAGTGGCTCACGCTTAAAAAGCAGGGGGTaGAGAGCGGCAACTGTTTGC +
Preference number: 4 (lower is better)
Translates to: VHDVVKLTRGRGRVSGSRLKSRG*RAATVC
Trigger: GCAAACAGTTGCCGCTCTCCACCCCCTGCTTTTTAA...GCGTGAGCCACTTACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GATGAAAAGCATAGCTCTCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGAAGTGTCGGGCAGAGTaGCAGCCACAAACCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DEKHSSQVNTAAPLSIFWKCRAE*QPQTPG
Trigger: CCCTGGGGTTTGTGGCTGTCACTCTGCCCGACACTT...CCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGAGAGCTATGCTTTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTGGTGGGCACCCAGGGTaGCGCCAATTTTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PHLIQEMITFRFLMKSIAGGHPG*RQFWWP
Trigger: TGGCCACCAAAATTGGCGTCACCCTGGGTGCCCACC...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp AACTCTACTGCCCAGTATTGGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATGCCTGATGTGCAGCCTTaGATGCATCCTGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: NSTAQYWKKRAVKSGPAMPDVQP*MHPGLW
Trigger: CCACAGCCCAGGATGCATTCAAGGCTGCACATCAGG...CATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAATACTGGGCAGTAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp GATGAAAAGCATAGCTCTCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGGGCTGCGGGGGCATTTaGTCTGTGCCAGCCTACACT +
Preference number: 4 (lower is better)
Translates to: DEKHSSQVNTAAPLSIFWGCGGI*SVPAYT
Trigger: AGTGTAGGCTGGCACAGAGCAAATGCCCCCGCAGCC...CCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGAGAGCTATGCTTTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp GCTGTTAAATCAGGTCCTGCAATGGCAGATAGGCCCCAAGTCCTATGGCAGCAGGAGCCTGCTCAGAATTaGTGTTTATTCCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: AVKSGPAMADRPQVLWQQEPAQN*CLFHRS
Trigger: AGACCTGTGGAATAAACAGCAATTCTGAGCAGGCTC...CTGCTGCCATAGGACTTGGGGCCTATCTGCCATTGCAGGACCTGATTTAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp AGGCCCTGTCCTGGTTCAGTGGGAAAGGTACGTAGGTTGATTACTGACATGAGCAGTCAGTGGCTGAGTTaGAACCAGAATACCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RPCPGSVGKVRRLITDMSSQWLS*NQNTCL
Trigger: GAGACAGGTATTCTGGTTCCAACTCAGCCACTGACT...GCTCATGTCAGTAATCAACCTACGTACCTTTCCCACTGAACCAGGACAGGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp AGAAAGGGGACTTGTCCTGACACCAAGTCAGTGGCTGAGTTGGAACCAGAATACGTAAGGAAAGGAACCTaGGGTAGAAAGCTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: RKGTCPDTKSVAELEPEYVRKGT*GRKLPL
Trigger: AAGGGGGAGCTTTCTACCCCAGGTTCCTTTCCTTAC...GTATTCTGGTTCCAACTCAGCCACTGACTTGGTGTCAGGACAAGTCCCCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp GCATCGCCCGGTCCCTATGTAAAGACAAAGAAACAGGACTTTGCACGCTCACCTTCAGGAGTTCAAGACTaGCCTGGGCAAAGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: ASPGPYVKTKKQDFARSPSGVQD*PGQSLR
Trigger: TCTTAAACTTTGCCCAGGCCAGTCTTGAACTCCTGA...AGGTGAGCGTGCAAAGTCCTGTTTCTTTGTCTTTACATAGGGACCGGGCGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 72 bp ATGGGGGCAGATGGGTTCTCTGGGTTGGAAGAGCCTTaGGAATTAAAGAGTCCTATGTCCTCATGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: MGADGFSGLEEP*ELKSPMSSCCR
Trigger: TCTGCAACATGAGGACATAGGACTCTTTAATTCCAAAGGCTCTTCCAACCCAGAGAACCCATCTGCCCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 72 bp CCAGGTTACACACTGGGCACTGAAGAGACCACACATTaGTCAGTTTCCGAAACTCTACTGCCCAGTATTGGA +
Preference number: 4 (lower is better)
Translates to: PGYTLGTEETTH*SVSETLLPSIG
Trigger: TCCAATACTGGGCAGTAGAGTTTCGGAAACTGACAAATGTGTGGTCTCTTCAGTGCCCAGTGTGTAACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
3UTR CAA 72 bp CTGTGCACACCTGATGGGCATAGCAGCGTTTGCGTCTaGAAAACATTCATTTCACAAACTCCTAGCACACCC +
Preference number: 4 (lower is better)
Translates to: LCTPDGHSSVCV*KTFISQTPSTP
Trigger: GGGTGTGCTAGGAGTTTGTGAAATGAATGTTTTCAAGACGCAAACGCTGCTATGCCCATCAGGTGTGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp TCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGGAGGAGTGGGTTTTATGCATTTAAGGGTTTTCTaGCTCTGCAGGGCCCGATCC +
Preference number: 4 (lower is better)
Translates to: SGKYSSTSKHILGGVGFMHLRVF*LCRARS
Trigger: GGATCGGGCCCTGCAGAGGCAGAAAACCCTTAAATG...CATAAAACCCACTCCTCCCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp TTTGGATGGAATGGATTGCTCTGCAGTGGGGCAGGAGGGGGAACTGAGGTCTTACACTTTGTGCTTTGCTaGATAAAAAGGGAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: FGWNGLLCSGAGGGTEVLHFVLC*IKRESH
Trigger: ATGAGACTCCCTTTTTATGCAGCAAAGCACAAAGTG...TAAGACCTCAGTTCCCCCTCCTGCCCCACTGCAGAGCAATCCATTCCATCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp AGGCCCTGTCCTGGTTCAGTGGGAAAGGTACGTAGGTTGATTACTGACATGAGCAGAGCGGCAACTGTTTaGTCAAGACTTTTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: RPCPGSVGKVRRLITDMSRAATV*SRLFSK
Trigger: CTTACTGAAAAGTCTTGAGCAAACAGTTGCCGCTCT...GCTCATGTCAGTAATCAACCTACGTACCTTTCCCACTGAACCAGGACAGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp TCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGGAGGAGTGGGTTTTATGTCCCCAGTGGCTTCGTaGGGATGTCCAGCTTATTCT +
Preference number: 4 (lower is better)
Translates to: SGKYSSTSKHILGGVGFMSPVAS*GCPAYS
Trigger: AGAATAAGCTGGACATCCCCACGAAGCCACTGGGGA...CATAAAACCCACTCCTCCCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp AACTCTACTGCCCAGTATTGGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATGGCACTAAGTGTCCCATaGCACATTTGGCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: NSTAQYWKKRAVKSGPAMALSVP*HIWPSW
Trigger: CCATGAGGGCCAAATGTGCCATGGGACACTTAGTGC...CATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAATACTGGGCAGTAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp TCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGGAGGAGTGGGTTTTATGATAGGACTTCTGTGCTaGCTCCAGACAGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SGKYSSTSKHILGGVGFMIGLLC*LQTVQS
Trigger: TGACTGCACTGTCTGGAGTCAGCACAGAAGTCCTAT...CATAAAACCCACTCCTCCCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTAAGGGAGTCTCATCATaGTCCTCAGGCCTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PHLIQEMITFRFLMKSIAKGVSS*SSGLLC
Trigger: GCACAGCAGGCCTGAGGATCATGATGAGACTCCCTT...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTCCAGTGGGCCTGAGCTaGCCACCCTTATTTATGCTC +
Preference number: 4 (lower is better)
Translates to: PHLIQEMITFRFLMKSIAPVGLS*PPLFML
Trigger: GAGCATAAATAAGGGTGGTCAGCTCAGGCCCACTGG...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp AACTCTACTGCCCAGTATTGGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATGGGGGCATTTGCTCTGTaGCAGCCTACACTACATGTT +
Preference number: 4 (lower is better)
Translates to: NSTAQYWKKRAVKSGPAMGAFAL*QPTLHV
Trigger: AACATGTAGTGTAGGCTGGCACAGAGCAAATGCCCC...CATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAATACTGGGCAGTAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp AGAAAGGGGACTTGTCCTGACACCAAGTCAGTGGCTGAGTTGGAACCAGAATACGGGCATAGCAGCGTTTaGGTCTTGAAAACATTCATT +
Preference number: 4 (lower is better)
Translates to: RKGTCPDTKSVAELEPEYGHSSV*VLKTFI
Trigger: AATGAATGTTTTCAAGACGCAAACGCTGCTATGCCC...GTATTCTGGTTCCAACTCAGCCACTGACTTGGTGTCAGGACAAGTCCCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp AACTCTACTGCCCAGTATTGGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATGAAACCCTCTGGTGAATaGAGAAAAGCTCGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NSTAQYWKKRAVKSGPAMKPSGE*RKARVS
Trigger: GCTGACCCGAGCTTTTCTCCATTCACCAGAGGGTTT...CATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAATACTGGGCAGTAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp GGCACACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATGAGCCTGCTCAGAAATTTTGCCCAGAAATaGCCAGTGTTGTACCTGGGA +
Preference number: 4 (lower is better)
Translates to: GTQGTPKFASPFKMSLLRNFAQK*PVLYLG
Trigger: TCCCAGGTACAACACTGGCCATTTCTGGGCAAAATT...TCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTCACATTTGGCCCTCATaGAGGCCTCAAAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PHLIQEMITFRFLMKSIAHIWPS*RPQKGR
Trigger: CCTGCCCTTTTGAGGCCTCCATGAGGGCCAAATGTG...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTCTTGGCTCCAAAACCTaGCCTCTCCTTTTCACAGCC +
Preference number: 4 (lower is better)
Translates to: PHLIQEMITFRFLMKSIALGSKT*PLLFTA
Trigger: GGCTGTGAAAAGGAGAGGGCAGGTTTTGGAGCCAAG...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp GATGAAAAGCATAGCTCTCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGACATGTTGGAGCTGCTaGTCTTGCCTCTGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: DEKHSSQVNTAAPLSIFWTCWSC*SCLCLS
Trigger: ACTGAGACAGAGGCAAGACCAGCAGCTCCAACATGT...CCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGAGAGCTATGCTTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTTTGATAGCTGAGCACTaGCCCTTCATCAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PHLIQEMITFRFLMKSIALIAEH*PFISCV
Trigger: CACACAGCTGATGAAGGGTCAGTGCTCAGCTATCAA...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp AGAAAGACAAATGTATATGTGCCAAGTAAGAAGACTGGAAGGAATTATGAACAGCATGATCCTCAGGCCTaGTGTGCACACCTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RKTNVYVPSKKTGRNYEQHDPQA*CAHLMG
Trigger: GCCCATCAGGTGTGCACAGCAGGCCTGAGGATCATG...CTGTTCATAATTCCTTCCAGTCTTCTTACTTGGCACATATACATTTGTCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp AGAAAGACAAATGTATATGTGCCAAGTAAGAAGACTGGAAGGAATTATGAACAGGACACAAGCAAACACTaGCAGTCCCCACCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RKTNVYVPSKKTGRNYEQDTSKH*QSPPLP
Trigger: GGGCAAGGGTGGGGACTGCCAGTGTTTGCTTGTGTC...CTGTTCATAATTCCTTCCAGTCTTCTTACTTGGCACATATACATTTGTCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTCTCCTGCTTGAGCTGTaGCAGCATTTAAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: PHLIQEMITFRFLMKSIALLLEL*QHLRVF
Trigger: GAAAACCCTTAAATGCTGTCACAGCTCAAGCAGGAG...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR TCA 90 bp GATGAAAAGCATAGCTCTCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGCAGCCTCCTTTCCTGTaGAATAATAGGGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: DEKHSSQVNTAAPLSIFWQPPFL*NNREFL
Trigger: GAGAAATTCCCTATTATTTCACAGGAAAGGAGGCTG...CCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGAGAGCTATGCTTTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp AGAAAGACAAATGTATATGTGCCAAGTAAGAAGACTGGAAGGAATTATGAACAGTTTGGCTTCATCAGGTaGACCAGGGACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: RKTNVYVPSKKTGRNYEQFGFIR*TRDCRM
Trigger: CATCCTGCAGTCCCTGGTGCACCTGATGAAGCCAAA...CTGTTCATAATTCCTTCCAGTCTTCTTACTTGGCACATATACATTTGTCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp GATGAAAAGCATAGCTCTCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGTTTCCGAAACTCTACTaGCCAGTATTGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: DEKHSSQVNTAAPLSIFWFPKLY*PVLEEE
Trigger: CTCTTCTTCCAATACTGGGCAGTAGAGTTTCGGAAA...CCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGAGAGCTATGCTTTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR GCA 90 bp TCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGGAGGAGTGGGTTTTATGTCACACTTTGTGCTTTaGTGCATAAAAAGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: SGKYSSTSKHILGGVGFMSHFVL*CIKRES
Trigger: AGACTCCCTTTTTATGCAGCAAAGCACAAAGTGTGA...CATAAAACCCACTCCTCCCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp AGAAAGACAAATGTATATGTGCCAAGTAAGAAGACTGGAAGGAATTATGAACAGTTGTTCTGCACCAAATaGCCCCAGACTCCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: RKTNVYVPSKKTGRNYEQLFCTK*PQTPCQ
Trigger: CTGACAGGGAGTCTGGGGCCATTTGGTGCAGAACAA...CTGTTCATAATTCCTTCCAGTCTTCTTACTTGGCACATATACATTTGTCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CCA 90 bp CCACACCTCATCCAAGAGATGATCACGTTTAGGTTTTTGATGAAAAGCATAGCTATGTCATTTGGTGGGTaGCTAAAGTTGCTAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PHLIQEMITFRFLMKSIAMSFGG*LKLLEV
Trigger: GACTTCTAGCAACTTTAGCCACCCACCAAATGACAT...AGCTATGCTTTTCATCAAAAACCTAAACGTGATCATCTCTTGGATGAGGTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCGTCAGTGGCTACTTGTaGCAGCCAGTGGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRVSGYL*QPVGLS
Trigger: GCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGAC...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCCCTGTCAGTGGCTACTaGTTGCAGCCAGTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRPVSGY*LQPVGL
Trigger: CAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGG...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp CCCATGAGGGCACAGGTGGGCCCCACACTCACTACGGGGCCAGGGCAGGGCCGCAAGATGGCCACTGGGTaGGGGGTTGTTCTGCACCAA +
Preference number: 5 (lower is better)
Translates to: PMRAQVGPTLTTGPGQGRKMATG*GVVLHQ
Trigger: TTGGTGCAGAACAACCCCCAACCCAGTGGCCATCTT...GCGGCCCTGCCCTGGCCCCGTAGTGAGTGTGGGGCCCACCTGTGCCCTCATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGTGTCCCATGGCACATTaGGCCCTCATGGAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALCPMAH*ALMEAS
Trigger: TGAGGCCTCCATGAGGGCCAAATGTGCCATGGGACA...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp AGAGCCCTTCTCCTCACACCTAAACCCTCTGGTGAATGGAGAAAAGCTCGGGTCCCACTGGGTTGGGGGTaGTTCTGCACCAAATGGCCC +
Preference number: 5 (lower is better)
Translates to: RALLLTPKPSGEWRKARVPLGWG*FCTKWP
Trigger: GGGCCATTTGGTGCAGAACAACCCCCAACCCAGTGG...GACCCGAGCTTTTCTCCATTCACCAGAGGGTTTAGGTGTGAGGAGAAGGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGGCCAGTCACCCTGCTTaGGATGGAATGGATTGCTCT +
Preference number: 5 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALASHPA*DGMDCS
Trigger: AGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGC...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGCTAACACTCAGGCCATaGCCTCTTCCAATCTCTGCT +
Preference number: 5 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALLTLRP*PLPISA
Trigger: AGCAGAGATTGGAAGAGGCAATGGCCTGAGTGTTAG...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp GCATCGCCCGGTCCCTATGTAAAGACAAAGAAACAGGACTTTGCACGCTCACCTTCTCGCTCCACCATGTaGACGAAGCTCATGACCAGG +
Preference number: 5 (lower is better)
Translates to: ASPGPYVKTKKQDFARSPSRSTM*TKLMTR
Trigger: CCTGGTCATGAGCTTCGTCAACATGGTGGAGCGAGA...AGGTGAGCGTGCAAAGTCCTGTTTCTTTGTCTTTACATAGGGACCGGGCGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp TTGCTAGAAGTCTGGCCACCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCCAGAAATGGCCAGTGTaGTACCTGGGAAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: LLEVWPPGRPRLSHFVLCQKWPV*YLGRGR
Trigger: TCTGCCTCTTCCCAGGTACAACACTGGCCATTTCTG...GCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGGTGGCCAGACTTCTAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp CCCTGTCAGTGGCTACTTGTTGCAGCCAGTGGGCCTGAGCTGACCACCCTTATTAAGTCAGTGGCTGAGTaGGAACCAGAATACCTGTCT +
Preference number: 5 (lower is better)
Translates to: PCQWLLVAASGPELTTLIKSVAE*EPEYLS
Trigger: AGACAGGTATTCTGGTTCCAACTCAGCCACTGACTT...AATAAGGGTGGTCAGCTCAGGCCCACTGGCTGCAACAAGTAGCCACTGACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp AACTCTACTGCCCAGTATTGGAAGAAGAGAGCTGTTAAATCAGGTCCTGCAATGAGGCTGCGGGGGCATTaGCTCTGTGCCAGCCTACAC +
Preference number: 5 (lower is better)
Translates to: NSTAQYWKKRAVKSGPAMRLRGH*LCASLH
Trigger: GTGTAGGCTGGCACAGAGCAAATGCCCCCGCAGCCT...CATTGCAGGACCTGATTTAACAGCTCTCTTCTTCCAATACTGGGCAGTAGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp AGGCCCTGTCCTGGTTCAGTGGGAAAGGTACGTAGGTTGATTACTGACATGAGCGGAACTGAGGTCTTATaGACAATGCCTGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: RPCPGSVGKVRRLITDMSGTEVL*TMPGGG
Trigger: GCCACCACCAGGCATTGTCAATAAGACCTCAGTTCC...GCTCATGTCAGTAATCAACCTACGTACCTTTCCCACTGAACCAGGACAGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp GCATCGCCCGGTCCCTATGTAAAGACAAAGAAACAGGACTTTGCACGCTCACCTTTTGGATGGAATGGATaGCTCTGCAGTGGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: ASPGPYVKTKKQDFARSPFGWNG*LCSGAG
Trigger: TCCTGCCCCACTGCAGAGCAATCCATTCCATCCAAA...AGGTGAGCGTGCAAAGTCCTGTTTCTTTGTCTTTACATAGGGACCGGGCGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp ATGCCTGGCCGGAGACTGCCAGTCACCCTGCTTTGGATGGAATGGATTGCTCTGGTCACACTTTGTGCTTaGCTGCATAAAAAGGGAGTC +
Preference number: 5 (lower is better)
Translates to: MPGRRLPVTLLWMEWIALVTLCA*LHKKGV
Trigger: GACTCCCTTTTTATGCAGCAAAGCACAAAGTGTGAC...CAGAGCAATCCATTCCATCCAAAGCAGGGTGACTGGCAGTCTCCGGCCAGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp TTGCTAGAAGTCTGGCCACCAGGAAGGCCACGACTGTCACACTTTGTGCTTTGCGATGGGTTCTCTGGGTaGGAAGAGCCTTTGGAATTA +
Preference number: 5 (lower is better)
Translates to: LLEVWPPGRPRLSHFVLCDGFSG*EEPLEL
Trigger: TAATTCCAAAGGCTCTTCCAACCCAGAGAACCCATC...GCAAAGCACAAAGTGTGACAGTCGTGGCCTTCCTGGTGGCCAGACTTCTAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp GGCACACAAGGAACGCCCAAATTTGCAAGTCCCTTTAAAATGAGCCTGCTCAGAGGTGGGTGGCTAAAGTaGCTAGAAGTCTGGCCACCA +
Preference number: 5 (lower is better)
Translates to: GTQGTPKFASPFKMSLLRGGWLK*LEVWPP
Trigger: TGGTGGCCAGACTTCTAGCAACTTTAGCCACCCACC...TCTGAGCAGGCTCATTTTAAAGGGACTTGCAAATTTGGGCGTTCCTTGTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp GTACATGATGTGGTCAAATTAACAAGAGGCAGAGGCCGGGTAAGTGGCTCACGCCAAAGAAACAGGACTTaGCACGCTCACCTGGCATTA +
Preference number: 5 (lower is better)
Translates to: VHDVVKLTRGRGRVSGSRQRNRT*HAHLAL
Trigger: TAATGCCAGGTGAGCGTGCAAAGTCCTGTTTCTTTG...GCGTGAGCCACTTACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp GTACATGATGTGGTCAAATTAACAAGAGGCAGAGGCCGGGTAAGTGGCTCACGCATTTTGGTGGCCAGCTaGTTCATAACTCCTAGACAC +
Preference number: 5 (lower is better)
Translates to: VHDVVKLTRGRGRVSGSRILVAS*FITPRH
Trigger: GTGTCTAGGAGTTATGAACAAGCTGGCCACCAAAAT...GCGTGAGCCACTTACCCGGCCTCTGCCTCTTGTTAATTTGACCACATCATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp TCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGGAGGAGTGGGTTTTATGAGGGTGACGCCAATTTaGGTGGCCAGCTTGTTCATA +
Preference number: 5 (lower is better)
Translates to: SGKYSSTSKHILGGVGFMRVTPI*VASLFI
Trigger: TATGAACAAGCTGGCCACCAAAATTGGCGTCACCCT...CATAAAACCCACTCCTCCCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp AGAAAGGGGACTTGTCCTGACACCAAGTCAGTGGCTGAGTTGGAACCAGAATACGAAGAGACCACACATTaGTCAGTTTCCGAAACTCTA +
Preference number: 5 (lower is better)
Translates to: RKGTCPDTKSVAELEPEYEETTH*SVSETL
Trigger: TAGAGTTTCGGAAACTGACAAATGTGTGGTCTCTTC...GTATTCTGGTTCCAACTCAGCCACTGACTTGGTGTCAGGACAAGTCCCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp AGAAAGACAAATGTATATGTGCCAAGTAAGAAGACTGGAAGGAATTATGAACAGAGGCACGAGAATTGCTaGAACCTGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RKTNVYVPSKKTGRNYEQRHENC*NLGGRG
Trigger: ACCTCTGCCTCCCAGGTTCAAGCAATTCTCGTGCCT...CTGTTCATAATTCCTTCCAGTCTTCTTACTTGGCACATATACATTTGTCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331593.6
CDS-3UTR CAA 90 bp GATGAAAAGCATAGCTCTCAGGTAAATACAGCAGCACCTCTAAGCATATTCTGGATCACGTTTAGGTTTTaGATGAAAAGCATAGCTCTC +
Preference number: 5 (lower is better)
Translates to: DEKHSSQVNTAAPLSIFWITFRF*MKSIAL
Trigger: GAGAGCTATGCTTTTCATCAAAAACCTAAACGTGAT...CCAGAATATGCTTAGAGGTGCTGCTGTATTTACCTGAGAGCTATGCTTTTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000331593.6