RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BMP7 (Homo sapiens)

Ensembl gene IDs: ENSG00000101144

Ensembl transcript IDs: ENST00000395863.8, ENST00000395864.7, ENST00000433911.1, ENST00000450594.6, ENST00000460817.5, ENST00000463939.1, ENST00000476877.1, ENST00000524700.5, ENST00000530870.1

Found 373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACAGCCACGGGTGCCCTTGCCAGGGCCCAGCCTTGGAATGCCACTaGAGACAAAGACCAGAGGGTCCACTGGGGCGATGTGCAGTGCTC +
Preference number: 1 (lower is better)
Translates to: DSHGCPCQGPALECH*RQRPEGPLGRCAVL
Trigger: GAGCACTGCACATCGCCCCAGTGGACCCTCTGGTCTTTGTCTGCAGTGGCATTCCAAGGCTGGGCCCTGGCAAGGGCACCCGTGGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CCA 90 bp GCCCAGCCTTGGAATGCCACTGCAGACAAAGACCAGAGGGTCCACTaGGGCGATGTGCAGTGCTCCTGCTCACCCCACTCCCGTGGAGAA +
Preference number: 1 (lower is better)
Translates to: AQPWNATADKDQRVH*GDVQCSCSPHSRGE
Trigger: TTCTCCACGGGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCAGTGGACCCTCTGGTCTTTGTCTGCAGTGGCATTCCAAGGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR GCA 90 bp GCCACTGCAGACAAAGACCAGAGGGTCCACTGGGGCGATGTGCAGTaGTCCTGCTCACCCCACTCCCGTGGAGAACTAGGCTTCATTGGT +
Preference number: 1 (lower is better)
Translates to: ATADKDQRVHWGDVQ*SCSPHSRGELGFIG
Trigger: ACCAATGAAGCCTAGTTCTCCACGGGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCAGTGGACCCTCTGGTCTTTGTCTGCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR GCA 90 bp GCAGACAAAGACCAGAGGGTCCACTGGGGCGATGTGCAGTGCTCCTaGTCACCCCACTCCCGTGGAGAACTAGGCTTCATTGGTGCTGTT +
Preference number: 1 (lower is better)
Translates to: ADKDQRVHWGDVQCS*SPHSRGELGFIGAV
Trigger: AACAGCACCAATGAAGCCTAGTTCTCCACGGGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCAGTGGACCCTCTGGTCTTTGTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR TCA 90 bp AGACAGTCTAGCCCTCCCCTAGGCCTTGTGTTTGTGGCCGGAGGCTaGGTGCATACTATTTATGGGACTCACCAGCCAAGGCAAGGCAGG +
Preference number: 1 (lower is better)
Translates to: RQSSPPLGLVFVAGG*VHTIYGTHQPRQGR
Trigger: CCTGCCTTGCCTTGGCTGGTGAGTCCCATAAATAGTATGCACTCAGCCTCCGGCCACAAACACAAGGCCTAGGGGAGGGCTAGACTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CCA 90 bp CCCTCCTCGGAGCAGACATTTGCTCTTTCCCCTCCCACTAGATCTTaGATTTGGGCAAACCTCGGTAAACACTGGGCCTCTGCAAGCCTC +
Preference number: 1 (lower is better)
Translates to: PSSEQTFALSPPTRS*IWANLGKHWASASL
Trigger: GAGGCTTGCAGAGGCCCAGTGTTTACCGAGGTTTGCCCAAATCCAAGATCTAGTGGGAGGGGAAAGAGCAAATGTCTGCTCCGAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CCA 90 bp CCTAGGCCTTGTGTTTGTGGCCGGAGGCTGAGTGCATACTATTTATaGGACTCACCAGCCAAGGCAAGGCAGGCTTACACCAAGAGCCAC +
Preference number: 1 (lower is better)
Translates to: PRPCVCGRRLSAYYL*DSPAKARQAYTKSH
Trigger: GTGGCTCTTGGTGTAAGCCTGCCTTGCCTTGGCTGGTGAGTCCCATAAATAGTATGCACTCAGCCTCCGGCCACAAACACAAGGCCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR TCA 90 bp AAGGAGCAAATTTGTTTGCAGAGACTTCTGATCAGGGTCTGCAAATaGAGAGACAGCCACGGGTGCCCTTGCCAGGGCCCAGCCTTGGAA +
Preference number: 1 (lower is better)
Translates to: KEQICLQRLLIRVCK*RDSHGCPCQGPALE
Trigger: TTCCAAGGCTGGGCCCTGGCAAGGGCACCCGTGGCTGTCTCTTCATTTGCAGACCCTGATCAGAAGTCTCTGCAAACAAATTTGCTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CCA 90 bp TCGGAGCAGACATTTGCTCTTTCCCCTCCCACTAGATCTTGGATTTaGGCAAACCTCGGTAAACACTGGGCCTCTGCAAGCCTCAGGATG +
Preference number: 1 (lower is better)
Translates to: SEQTFALSPPTRSWI*ANLGKHWASASLRM
Trigger: CATCCTGAGGCTTGCAGAGGCCCAGTGTTTACCGAGGTTTGCCCAAATCCAAGATCTAGTGGGAGGGGAAAGAGCAAATGTCTGCTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR TCA 90 bp GTCCCCTCTGCAATTTCACATGGATTTACTACCACTGGGGCGAGGTaGAAAGCCAATCCCAAATGTCTGCGGGTATTTCACACACCTAGT +
Preference number: 1 (lower is better)
Translates to: VPSAISHGFTTTGAR*KANPKCLRVFHTPS
Trigger: ACTAGGTGTGTGAAATACCCGCAGACATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCATGTGAAATTGCAGAGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CCA 90 bp TGCTGTCCTTGTCCCCTCTGCAATTTCACATGGATTTACTACCACTaGGGCGAGGTGAAAAGCCAATCCCAAATGTCTGCGGGTATTTCA +
Preference number: 1 (lower is better)
Translates to: CCPCPLCNFTWIYYH*GEVKSQSQMSAGIS
Trigger: TGAAATACCCGCAGACATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCATGTGAAATTGCAGAGGGGACAAGGACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CCA 90 bp ACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTaGTTAGGATGTCACCCTCAACAAGGCTTCTATTTGCAATGTAAG +
Preference number: 1 (lower is better)
Translates to: TPRATSEMPPPNRDT*LGCHPQQGFYLQCK
Trigger: CTTACATTGCAAATAGAAGCCTTGTTGAGGGTGACATCCTAACCAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CCA 90 bp CAACTATTTACAGGTTTAAATGTACAAATGATGCTAACCAGAGGCTaGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGC +
Preference number: 1 (lower is better)
Translates to: QLFTGLNVQMMLTRG*LGQKTHTKRDHTKS
Trigger: GCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTGGTTAGCATCATTTGTACATTTAAACCTGTAAATAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR GCA 90 bp GTCCACTGGGGCGATGTGCAGTGCTCCTGCTCACCCCACTCCCGTGGAGAACTAAATGTGCCCACCCCTTaGCACGCCCCCTTCCTCCCA +
Preference number: 2 (lower is better)
Translates to: VHWGDVQCSCSPHSRGELNVPTP*HAPFLP
Trigger: TGGGAGGAAGGGGGCGTGGCAAGGGGTGGGCACATT...TAGTTCTCCACGGGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCAGTGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR CCA 90 bp CACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGTCAGGCAGTTGGTCTGCTaGTTCCTGGCCAAGGCGAGC +
Preference number: 2 (lower is better)
Translates to: HGWVAWLVGAHNYLWKRVRQLVC*FLAKAS
Trigger: GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCT...GACTCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR-3UTR TCA 90 bp TCCTCCCACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAAGAGTCCGTGCATGGCTaGGACTTCCCAGCCAATGAC +
Preference number: 2 (lower is better)
Translates to: SSHGWVAWLVGAHNYLWKESVHG*DFPAND
Trigger: GTCATTGGCTGGGAAGTCTCAGCCATGCACGGACTC...TTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTGGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR-3UTR CCA 90 bp CACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGTCTGGTCTGCTGGTTCCTaGCCAAGGCGAGCAATGGAG +
Preference number: 2 (lower is better)
Translates to: HGWVAWLVGAHNYLWKRVWSAGS*PRRAME
Trigger: CTCCATTGCTCGCCTTGGCCAGGAACCAGCAGACCA...GACTCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR-3UTR GCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCAAAAGGCAGTTGGTCTaGTGGTTCCTGGCCAAGGCG +
Preference number: 2 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPKRQLV*WFLAKA
Trigger: CGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTT...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR-3UTR GCA 90 bp CAGAGGCTGGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCTGGGGCGATGTGCAGTaGTCCTGCTCACCCCACTCC +
Preference number: 2 (lower is better)
Translates to: QRLVGSENSHQEGSHKKPWGDVQ*SCSPHS
Trigger: GGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCA...GGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR GCA 90 bp CTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTGGTTAAGCCACGGGTGCCCTTaGCAGGGCCCAGCCTTGGAA +
Preference number: 2 (lower is better)
Translates to: LTPRATSEMPPPNRDTWLSHGCP*QGPALE
Trigger: TTCCAAGGCTGGGCCCTGGCAAGGGCACCCGTGGCT...TAACCAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR TCA 90 bp CAGGCTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTGACTCCTGACCTCAAATaGTCCGCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: QAYTKSHVRNATSKSGHLTPDLK*SAHLSL
Trigger: GAGGCTGAGGTGGGCGGATCATTTGAGGTCAGGAGT...CAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR GCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCCTGCTAGGTTTTGCCTaGACAGCTTGTAGGATCTTG +
Preference number: 2 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPLLGFA*TACRIL
Trigger: CAAGATCCTACAAGCTGTGCAGGCAAAACCTAGCAG...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR-3UTR TCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCCTGCCACTGAAAAACTaGTCAAAAGCCATATGCTGC +
Preference number: 2 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPLPLKN*SKAICC
Trigger: GCAGCATATGGCTTTTGATCAGTTTTTCAGTGGCAG...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR-3UTR GCA 90 bp CAGAGGCTGGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCTCACCCAAGCTGGAGTaGAGTGGGACGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: QRLVGSENSHQEGSHKKPSPKLE*SGTILA
Trigger: AGCCAAGATCGTCCCACTGCACTCCAGCTTGGGTGA...GGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR GCA 90 bp CAGAGGCTGGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCGGCCCAGCCTTGGAATaGCACTGCAGACAAAGACCA +
Preference number: 2 (lower is better)
Translates to: QRLVGSENSHQEGSHKKPGPALE*HCRQRP
Trigger: TGGTCTTTGTCTGCAGTGGCATTCCAAGGCTGGGCC...GGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR CCA 90 bp CAGAGGCTGGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCCTCACCCCACTCCCGTaGAGAACTAGGCTTCATTGG +
Preference number: 2 (lower is better)
Translates to: QRLVGSENSHQEGSHKKPLTPLP*RTRLHW
Trigger: CCAATGAAGCCTAGTTCTCCACGGGAGTGGGGTGAG...GGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR CCA 90 bp AACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCTCCCAGCCAATGACCTaGCCCGGCCATTTTTCTTTA +
Preference number: 2 (lower is better)
Translates to: NFRVNFPFAQTPMCPPLASQPMT*PGHFSL
Trigger: TAAAGAAAAATGGCCGGGCCAGGTCATTGGCTGGGA...GGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR-3UTR TCA 90 bp AGGCAGGCTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACGTTTGCAGAGACTTCTaGTCAGGGTCTGCAAATGAA +
Preference number: 2 (lower is better)
Translates to: RQAYTKSHVRNATSKSGHVCRDF*SGSANE
Trigger: TTCATTTGCAGACCCTGATCAGAAGTCTCTGCAAAC...GTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAGCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR TCA 90 bp AATTTCACATGGATTTACTACCACTGGGGCGAGGTGAAAAGCCAATCCCAAATGGAGTCCGTGCATGGCTaGGACTTCCCAGCCAATGAC +
Preference number: 2 (lower is better)
Translates to: NFTWIYYHWGEVKSQSQMESVHG*DFPAND
Trigger: GTCATTGGCTGGGAAGTCTCAGCCATGCACGGACTC...CATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCATGTGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR GCA 90 bp CTCCACTTGACACAGCTTCTGTTTACGCATCAGGATAAACCGAGAAATGGGGATCTGGAAACGAGTCCGTaGATGGCTGAGACTTCCCAG +
Preference number: 2 (lower is better)
Translates to: LHLTQLLFTHQDKPRNGDLETSP*MAETSQ
Trigger: CTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAG...ATCCCCATTTCTCGGTTTATCCTGATGCGTAAACAGAAGCTGTGTCAAGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR CCA 90 bp CTGTGCCCGGCCCATTGGTGCTTCTTAACAACAGGGTTGAGTTGCAAGTTCCATGCTCATAATTACCTCTaGAAACGAGTCCGTGCATGG +
Preference number: 2 (lower is better)
Translates to: LCPAHWCFLTTGLSCKFHAHNYL*KRVRAW
Trigger: CCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC...ATGGAACTTGCAACTCAACCCTGTTGTTAAGAAGCACCAATGGGCCGGGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR TCA 90 bp TACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTGCCACTGAAAAACTaGTCAAAAGCCATATGCTGC +
Preference number: 2 (lower is better)
Translates to: YRNFRVNFPFAQTPMCPPLPLKN*SKAICC
Trigger: GCAGCATATGGCTTTTGATCAGTTTTTCAGTGGCAG...GGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR CCA 90 bp CAAGACCGGGTTCCACATGGCCACAGTTTTCGATCACCTTGTTTTCTTTACAGAAAACGAGTCCGTGCATaGCTGAGACTTCCCAGCCAA +
Preference number: 2 (lower is better)
Translates to: QDRVPHGHSFRSPCFLYRKRVRA*LRLPSQ
Trigger: TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTT...TCTGTAAAGAAAACAAGGTGATCGAAAACTGTGGCCATGTGGAACCCGGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR CCA 90 bp CAGAGGCTGGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCAGTGCATACTATTTATaGGACTCACCAGCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: QRLVGSENSHQEGSHKKPSAYYL*DSPAKA
Trigger: TGCCTTGGCTGGTGAGTCCCATAAATAGTATGCACT...GGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR GCA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCTCAAAAGCCATATGCTaGTCATGTTTCCTAATACTC +
Preference number: 2 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSSKAIC*SCFLIL
Trigger: GAGTATTAGGAAACATGAGCAGCATATGGCTTTTGA...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR-3UTR CCA 90 bp CAAGACCGGGTTCCACATGGCCACAGTTTTCGATCACCTTGTTTTCTTTACAGACCAAATCGGGACACTTaGTTAGGATGTCACCCTCAA +
Preference number: 2 (lower is better)
Translates to: QDRVPHGHSFRSPCFLYRPNRDT*LGCHPQ
Trigger: TTGAGGGTGACATCCTAACCAAGTGTCCCGATTTGG...TCTGTAAAGAAAACAAGGTGATCGAAAACTGTGGCCATGTGGAACCCGGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR TCA 90 bp CTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTGGTTACACGGCAAATCCAGCTaGACAACAGAACATATTTTT +
Preference number: 2 (lower is better)
Translates to: LTPRATSEMPPPNRDTWLHGKSS*TTEHIF
Trigger: AAAAATATGTTCTGTTGTTCAGCTGGATTTGCCGTG...TAACCAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR CCA 90 bp AAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCACACCTTTATGGTCTGCTGGTTCCTaGCCAAGGCGAGCAATGGAG +
Preference number: 2 (lower is better)
Translates to: KLIKSHMLLMFPNTLTPLWSAGS*PRRAME
Trigger: CTCCATTGCTCGCCTTGGCCAGGAACCAGCAGACCA...TAAAGGTGTGAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR CAA 90 bp CAGACCTCCTATTATGCCATCTCCCCCTTAATTCAAGGAGCAAATTaGTTTGCAGAGACTTCTGATCAGGGTCTGCAAATGAAGAGACAG +
Preference number: 2 (lower is better)
Translates to: QTSYYAISPLIQGAN*FAETSDQGLQMKRQ
Trigger: CTGTCTCTTCATTTGCAGACCCTGATCAGAAGTCTCTGCAAACAAATTTGCTCCTTGAATTAAGGGGGAGATGGCATAATAGGAGGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR GCA 90 bp AAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCACACCTTTAAAAAGGCAGTTGGTCTaGTGGTTCCTGGCCAAGGCG +
Preference number: 2 (lower is better)
Translates to: KLIKSHMLLMFPNTLTPLKRQLV*WFLAKA
Trigger: CGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTT...TAAAGGTGTGAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR CAA 90 bp CTATTTACAGGTTTAAATGTACAAATGATGCTAACCAGAGGCTGGTaGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCC +
Preference number: 2 (lower is better)
Translates to: LFTGLNVQMMLTRGW*GQKTHTKRDHTKSP
Trigger: GGGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTGGTTAGCATCATTTGTACATTTAAACCTGTAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR CCA 90 bp AATTTCACATGGATTTACTACCACTGGGGCGAGGTGAAAAGCCAATCCCAAATGACTAGATCTTGGATTTaGGCAAACCTCGGTAAACAC +
Preference number: 2 (lower is better)
Translates to: NFTWIYYHWGEVKSQSQMTRSWI*ANLGKH
Trigger: GTGTTTACCGAGGTTTGCCCAAATCCAAGATCTAGT...CATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCATGTGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR GCA 72 bp AGCCACGGGTGCCCTTGCCAGGGCCCAGCCTTGGAATaGCACTGCAGACAAAGACCAGAGGGTCCACTGGGG +
Preference number: 3 (lower is better)
Translates to: SHGCPCQGPALE*HCRQRPEGPLG
Trigger: CCCCAGTGGACCCTCTGGTCTTTGTCTGCAGTGGCATTCCAAGGCTGGGCCCTGGCAAGGGCACCCGTGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR GCA 72 bp GACAAAGACCAGAGGGTCCACTGGGGCGATGTGCAGTaGTCCTGCTCACCCCACTCCCGTGGAGAACTAGGC +
Preference number: 3 (lower is better)
Translates to: DKDQRVHWGDVQ*SCSPHSRGELG
Trigger: GCCTAGTTCTCCACGGGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCAGTGGACCCTCTGGTCTTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR GCA 72 bp CTGCAGACAAAGACCAGAGGGTCCACTGGGGCGATGTaGAGTGCTCCTGCTCACCCCACTCCCGTGGAGAAC +
Preference number: 3 (lower is better)
Translates to: LQTKTRGSTGAM*SAPAHPTPVEN
Trigger: GTTCTCCACGGGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCAGTGGACCCTCTGGTCTTTGTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR GCA 72 bp GACCAGAGGGTCCACTGGGGCGATGTGCAGTGCTCCTaGTCACCCCACTCCCGTGGAGAACTAGGCTTCATT +
Preference number: 3 (lower is better)
Translates to: DQRVHWGDVQCS*SPHSRGELGFI
Trigger: AATGAAGCCTAGTTCTCCACGGGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCAGTGGACCCTCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CCA 72 bp TGGAATGCCACTGCAGACAAAGACCAGAGGGTCCACTaGGGCGATGTGCAGTGCTCCTGCTCACCCCACTCC +
Preference number: 3 (lower is better)
Translates to: WNATADKDQRVH*GDVQCSCSPHS
Trigger: GGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCAGTGGACCCTCTGGTCTTTGTCTGCAGTGGCATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CCA 72 bp GGGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTaGTTCCTGGCCAAGGCGAGCAATGGAGGATCCAGA +
Preference number: 3 (lower is better)
Translates to: GRGRSHKRQLVC*FLAKASNGGSR
Trigger: TCTGGATCCTCCATTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR TCA 72 bp AGCCCTCCCCTAGGCCTTGTGTTTGTGGCCGGAGGCTaGGTGCATACTATTTATGGGACTCACCAGCCAAGG +
Preference number: 3 (lower is better)
Translates to: SPPLGLVFVAGG*VHTIYGTHQPR
Trigger: CCTTGGCTGGTGAGTCCCATAAATAGTATGCACTCAGCCTCCGGCCACAAACACAAGGCCTAGGGGAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR GCA 72 bp ATAGGGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTaGTGGTTCCTGGCCAAGGCGAGCAATGGAGGATCC +
Preference number: 3 (lower is better)
Translates to: IGRGRSHKRQLV*WFLAKASNGGS
Trigger: GGATCCTCCATTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR CCA 72 bp GCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAATaGAGGATCCAGAAAAACTTGGCCCCAAAGGGTCTG +
Preference number: 3 (lower is better)
Translates to: AVGLLVPGQGEQ*RIQKNLAPKGL
Trigger: CAGACCCTTTGGGGCCAAGTTTTTCTGGATCCTCCATTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR CCA 72 bp GAGCCCCGGTGTTTCCAGGAACTGTCTGAGTCAAGATaGAGAAACAGTCCCCCACAAGACCGGGTTCCACAT +
Preference number: 3 (lower is better)
Translates to: EPRCFQELSESR*RNSPPQDRVPH
Trigger: ATGTGGAACCCGGTCTTGTGGGGGACTGTTTCTCCATCTTGACTCAGACAGTTCCTGGAAACACCGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR CAA 90 bp CACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGTCAGGATCCAGAAAAACTaGGCCCCAAAGGGTCTGAAT +
Preference number: 3 (lower is better)
Translates to: HGWVAWLVGAHNYLWKRVRIQKN*APKGLN
Trigger: ATTCAGACCCTTTGGGGCCAAGTTTTTCTGGATCCT...GACTCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR-3UTR CAA 90 bp CAGGCTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTGACTGTGCCCGGCCCATaGGTGCTTCTTAACAACAGG +
Preference number: 3 (lower is better)
Translates to: QAYTKSHVRNATSKSGHLTVPGP*VLLNNR
Trigger: CCTGTTGTTAAGAAGCACCAATGGGCCGGGCACAGT...CAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR TCA 72 bp CTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTaGGACTTCCCAGCCAATGACCTGGCCCGGCCATTT +
Preference number: 3 (lower is better)
Translates to: LIITSGNESVHG*DFPANDLARPF
Trigger: AAATGGCCGGGCCAGGTCATTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR TCA 72 bp ATTTGTTTGCAGAGACTTCTGATCAGGGTCTGCAAATaGAGAGACAGCCACGGGTGCCCTTGCCAGGGCCCA +
Preference number: 3 (lower is better)
Translates to: ICLQRLLIRVCK*RDSHGCPCQGP
Trigger: TGGGCCCTGGCAAGGGCACCCGTGGCTGTCTCTTCATTTGCAGACCCTGATCAGAAGTCTCTGCAAACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR CAA 90 bp GGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAAAGGATCCAGAAAAACTaGGCCCCAAAGGGTCTGAAT +
Preference number: 3 (lower is better)
Translates to: GKVSQKAVGLLVPGQGEQRIQKN*APKGLN
Trigger: ATTCAGACCCTTTGGGGCCAAGTTTTTCTGGATCCT...TTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR CCA 72 bp ACATTTGCTCTTTCCCCTCCCACTAGATCTTGGATTTaGGCAAACCTCGGTAAACACTGGGCCTCTGCAAGC +
Preference number: 3 (lower is better)
Translates to: TFALSPPTRSWI*ANLGKHWASAS
Trigger: GCTTGCAGAGGCCCAGTGTTTACCGAGGTTTGCCCAAATCCAAGATCTAGTGGGAGGGGAAAGAGCAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CCA 72 bp TGTCCCCTCTGCAATTTCACATGGATTTACTACCACTaGGGCGAGGTGAAAAGCCAATCCCAAATGTCTGCG +
Preference number: 3 (lower is better)
Translates to: CPLCNFTWIYYH*GEVKSQSQMSA
Trigger: CGCAGACATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCATGTGAAATTGCAGAGGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CCA 72 bp GCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTaGTTAGGATGTCACCCTCAACAAGGCTTCTATTTG +
Preference number: 3 (lower is better)
Translates to: ATSEMPPPNRDT*LGCHPQQGFYL
Trigger: CAAATAGAAGCCTTGTTGAGGGTGACATCCTAACCAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR CAA 90 bp CAGGCTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTGGTAGGATCTTGTTCATaGGATGCTGCCACTGAAAAA +
Preference number: 3 (lower is better)
Translates to: QAYTKSHVRNATSKSGHLVGSCS*DAATEK
Trigger: TTTTTCAGTGGCAGCATCCAATGAACAAGATCCTAC...CAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR TCA 72 bp GCAATTTCACATGGATTTACTACCACTGGGGCGAGGTaGAAAGCCAATCCCAAATGTCTGCGGGTATTTCAC +
Preference number: 3 (lower is better)
Translates to: AISHGFTTTGAR*KANPKCLRVFH
Trigger: GTGAAATACCCGCAGACATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCATGTGAAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR-3UTR CAA 90 bp TTTACAGGTTTAAATGTACAAATGATGCTAACCAGAGGCTGGTTGGGTCAGAAACTCACACCTTTAAAGTaGGGGATAGGGAGGGGAAGG +
Preference number: 3 (lower is better)
Translates to: FTGLNVQMMLTRGWLGQKLTPLK*GIGRGR
Trigger: CCTTCCCCTCCCTATCCCCAACTTTAAAGGTGTGAG...TTTCTGACCCAACCAGCCTCTGGTTAGCATCATTTGTACATTTAAACCTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CCA 72 bp ACAGGTTTAAATGTACAAATGATGCTAACCAGAGGCTaGTTGGGTCAGAAAACTCACACCAAGAGGGATCAC +
Preference number: 3 (lower is better)
Translates to: TGLNVQMMLTRG*LGQKTHTKRDH
Trigger: GTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTGGTTAGCATCATTTGTACATTTAAACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGACGCCGCAGCTCGCAGTaGGCGCACGTGCATCGCGCC +
Preference number: 4 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRRRSSQ*AHVHRA
Trigger: GGCGCGATGCACGTGCGCTCACTGCGAGCTGCGGCG...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCCGCCGCAGCTCGCAGTaGGCGCACGTGCATCGCGCC +
Preference number: 4 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPRRSSQ*AHVHRA
Trigger: GGCGCGATGCACGTGCGCTCACTGCGAGCTGCGGCG...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAATCTCCCGCCGCTCCTaGCTGCGGAGGCGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRISRRS*LRRRRW
Trigger: CCACCGGCGCCTCCGCAGCCAGGAGCGGCGGGAGAT...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCGCCGCTCGGTCACTTaGTGCAGACGGGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: EGKVSQKAVGLLVPGQGERRSVT*CRRAPL
Trigger: CAGCGGGGCCCGTCTGCAGCAAGTGACCGAGCGGCG...CTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGACGCAGTGAGCGCACGTaGATCGCGCCGGCTCTACGC +
Preference number: 4 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRRSERT*IAPALR
Trigger: GCGTAGAGCCGGCGCGATGCACGTGCGCTCACTGCG...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAGCGCCACGAAGCTGTaGGGCGCCGCAGCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASSATKL*GAAARS
Trigger: ACTGCGAGCTGCGGCGCCGCACAGCTTCGTGGCGCT...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGAGCGCCACGAAGCTGTaGGGCGCCGCAGCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: EGKVSQKAVGLLVPGQGESATKL*GAAARS
Trigger: ACTGCGAGCTGCGGCGCCGCACAGCTTCGTGGCGCT...CTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCGTGCCGAGTTGTGCTTaGCCTGGAGGTGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPVPSCA*PGGAGA
Trigger: CGCGCCCGCACCTCCAGGGCAAGCACAACTCGGCAC...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp CCACTGCAGACAAAGACCAGAGGGTCCACTGGGGCGATGTGCAGTGCTCCTGCTCCGTGGACCGGATGCTaGGGAAGTGGACCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: PLQTKTRGSTGAMCSAPAPWTGC*GSGPPW
Trigger: CCACGGAGGTCCACTTCCGCAGCATCCGGTCCACGG...AGCAGGAGCACTGCACATCGCCCCAGTGGACCCTCTGGTCTTTGTCTGCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCGCGCACCGCAGGGCTTaGAAAGCAGCCCCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASAHRRA*KAAPAN
Trigger: GTTCGCCGGGGCTGCTTTCCAAGCCCTGCGGTGCGC...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp CACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGTCGGAGGCGCCGGTGGATaGAGCTCGAGTGCACCTCGT +
Preference number: 4 (lower is better)
Translates to: HGWVAWLVGAHNYLWKRVGGAGG*SSSAPR
Trigger: ACGAGGTGCACTCGAGCTTCATCCACCGGCGCCTCC...GACTCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCGGGGGCCCTGGGTACTaGAGACGGCCTTGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASGGPGY*RRPCRG
Trigger: ACCCCTACAAGGCCGTCTTCAGTACCCAGGGCCCCC...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAATCGCCGCTCGGTCACTTaGTGCAGACGGGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GRSHKRQLVCWFLAKASNRRSVT*CRRAPL
Trigger: CAGCGGGGCCCGTCTGCAGCAAGTGACCGAGCGGCG...ATTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAACGCAGTGAGCGCACGTaGATCGCGCCGGCTCTACGC +
Preference number: 4 (lower is better)
Translates to: GKVSQKAVGLLVPGQGEQRSERT*IAPALR
Trigger: GCGTAGAGCCGGCGCGATGCACGTGCGCTCACTGCG...TTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCGTCTCCACCGAGAGCTaGAGGCCCAGGTTGTGCCGC +
Preference number: 4 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPVSTES*RPRLCR
Trigger: GCGGCACAACCTGGGCCTGCAGCTCTCGGTGGAGAC...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp TCCTCCCACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAAAGCCACGGGTGCCCTTaGCAGGGCCCAGCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SSHGWVAWLVGAHNYLWKSHGCP*QGPALE
Trigger: TTCCAAGGCTGGGCCCTGGCAAGGGCACCCGTGGCT...TTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp TCCCACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGACAGCCTTGTGCGCCCTaGATCGCACAAGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SHGWVAWLVGAHNYLWKRQPCAP*IAQEAA
Trigger: GGCGGCCTCTTGTGCGATCCAGGGCGCACAAGGCTG...TCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAATGCGGGCGCGGGCGGTaGGGCAAGCCCAAAATGGAG +
Preference number: 4 (lower is better)
Translates to: GKVSQKAVGLLVPGQGEQCGRGR*GKPKME
Trigger: CTCCATTTTGGGCTTGCCCCACCGCCCGCGCCCGCA...TTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR CAA 72 bp AGAGACAGCCACGGGTGCCCTTGCCAGGGCCCAGCCTaGGAATGCCACTGCAGACAAAGACCAGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RDSHGCPCQGPA*ECHCRQRPEGP
Trigger: TGGACCCTCTGGTCTTTGTCTGCAGTGGCATTCCAAGGCTGGGCCCTGGCAAGGGCACCCGTGGCTGTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCCTCGTTGTCCAGGCTaGAGTCGGCCAGGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSPRCPG*SRPGRS
Trigger: GCTCCGCCCTGGCCGACTTCAGCCTGGACAACGAGG...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCATGGGTGCCGAGTTGTaGTTGCCCTGGAGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASMGAEL*LPWRCG
Trigger: CCCGCACCTCCAGGGCAAGCACAACTCGGCACCCAT...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCTTGTTCTGGGGCCCGTaGCGCCCAATCAGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSLFWGP*RPIRPA
Trigger: GGCGGGCCTGATTGGGCGGCACGGGCCCCAGAACAA...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCGCCACCATGAAGGGCTaGTTGTTCTGGGGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPATMKG*LFWGPC
Trigger: GCACGGGCCCCAGAACAAGCAGCCCTTCATGGTGGC...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAATGTGCCCACCCCTTaGCACGCCCCCTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASNVPTP*HAPFLP
Trigger: TGGGAGGAAGGGGGCGTGGCAAGGGGTGGGCACATT...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCGCACAGACACCAATGTaGCCACCCCTTGCCACGCCC +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASAQTPM*PPLATP
Trigger: GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGC...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp CAGAGGCTGGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCATCTCCCGCCGCTCCTaGCTGCGGAGGCGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: QRLVGSENSHQEGSHKKPISRRS*LRRRRW
Trigger: CCACCGGCGCCTCCGCAGCCAGGAGCGGCGGGAGAT...GGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp CACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGTCAAGGGCTGCTTGTTCTaGGGCCCGTGCCGCCCAATC +
Preference number: 4 (lower is better)
Translates to: HGWVAWLVGAHNYLWKRVKGCLF*GPCRPI
Trigger: GATTGGGCGGCACGGGCCCCAGAACAAGCAGCCCTT...GACTCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp AACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCGAACGAAAAGGCGAGTaGGGAGGCGGGCGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: NFRVNFPFAQTPMCPPLAERKGE*GGGRGW
Trigger: CCACCCGCGCCCGCCTCCTCACTCGCCTTTTCGTTC...GGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp AGATCAACACACCGCCCTCCTCGGAGCAGACATTTGCTCTTTCCCCTCCCACTAGGGGGCCCTGGGTACTaGAGACGGCCTTGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: RSTHRPPRSRHLLFPLPLGGPGY*RRPCRG
Trigger: ACCCCTACAAGGCCGTCTTCAGTACCCAGGGCCCCC...TAGTGGGAGGGGAAAGAGCAAATGTCTGCTCCGAGGAGGGCGGTGTGTTGATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp CCACTGCAGACAAAGACCAGAGGGTCCACTGGGGCGATGTGCAGTGCTCCTGCTGAGTCCGTGCATGGCTaGGACTTCCCAGCCAATGAC +
Preference number: 4 (lower is better)
Translates to: PLQTKTRGSTGAMCSAPAESVHG*DFPAND
Trigger: GTCATTGGCTGGGAAGTCTCAGCCATGCACGGACTC...AGCAGGAGCACTGCACATCGCCCCAGTGGACCCTCTGGTCTTTGTCTGCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp GGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAACAGCAGGAACAGGGGTaGCCAGAGCGCCACGAAGCT +
Preference number: 4 (lower is better)
Translates to: GKVSQKAVGLLVPGQGEQQQEQG*PERHEA
Trigger: AGCTTCGTGGCGCTCTGGGCACCCCTGTTCCTGCTG...TTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCGAGAGGATCTCGCGCTaGATCTCCCGCCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSERISR*ISRRSW
Trigger: CCAGGAGCGGCGGGAGATGCAGCGCGAGATCCTCTC...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCGTCTCCACCGAGAGCTaGAGGCCCAGGTTGTGCCGC +
Preference number: 4 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSVSTES*RPRLCR
Trigger: GCGGCACAACCTGGGCCTGCAGCTCTCGGTGGAGAC...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCGCGATGATCCAGTCCTaGCAGCCCAGGTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPAMIQS*QPRSRK
Trigger: CTTCCGAGACCTGGGCTGGCAGGACTGGATCATCGC...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGACCTCCTCCACCGCCATaGCGTTGTACAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRPPPPP*RCTGPA
Trigger: TGCTGGACCTGTACAACGCCATGGCGGTGGAGGAGG...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCGGTTGCTGGTGGCTGTaGTGTCAAACACCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASGCWWL*CQTPAS
Trigger: GCTGGCTGGTGTTTGACATCACAGCCACCAGCAACC...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp ATAGGGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGAGCCTTCAGGCGCGATaGTCCAGTCCTGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: IGRGRSHKRQLVCWFLAKSLQAR*SSPASP
Trigger: TGGGCTGGCAGGACTGGATCATCGCGCCTGAAGGCT...CTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCCCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCGAGTCCGTGCATGGCTaGGACTTCCCAGCCAATGAC +
Preference number: 4 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPESVHG*DFPAND
Trigger: GTCATTGGCTGGGAAGTCTCAGCCATGCACGGACTC...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGGATCCGGAATTCGGCTaGCGTGACAGCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: EGKVSQKAVGLLVPGQGEDPEFG*RDSFPF
Trigger: GAAGGGGAAGCTGTCACGGCAGCCGAATTCCGGATC...CTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp AGATCAACACACCGCCCTCCTCGGAGCAGACATTTGCTCTTTCCCCTCCCACTATCTGGCTGCGCTGTTTaGTCCCCGTGGACCGGATGC +
Preference number: 4 (lower is better)
Translates to: RSTHRPPRSRHLLFPLPLSGCAV*SPWTGC
Trigger: GCATCCGGTCCACGGGGAGCAAACAGCGCAGCCAGA...TAGTGGGAGGGGAAAGAGCAAATGTCTGCTCCGAGGAGGGCGGTGTGTTGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp TCCCACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGATGCTTCTTACAGGCCTaGCTCTGGTCGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SHGWVAWLVGAHNYLWKRCFLQA*LWSLLL
Trigger: CAGCAGCAGCGACCAGAGGCAGGCCTGTAAGAAGCA...TCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAACCTGCCTCTGGTCGCTaGTGCTGTTCTCATCCAGCG +
Preference number: 4 (lower is better)
Translates to: GKVSQKAVGLLVPGQGEQPASGR*CCSHPA
Trigger: CGCTGGATGAGAACAGCAGCAGCGACCAGAGGCAGG...TTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395864.7
CDS-3UTR CCA 90 bp CACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGTCGCGTCGGTGAGGAAATaGCTATCTTGCAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: HGWVAWLVGAHNYLWKRVASVRK*LSCRLA
Trigger: GGCCAGCCTGCAAGATAGCCATTTCCTCACCGACGC...GACTCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp TCCCACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGACCATGTCGGCGTCGGTaGGGAAATGGCTATCTTGCA +
Preference number: 4 (lower is better)
Translates to: SHGWVAWLVGAHNYLWKRPCRRR*GNGYLA
Trigger: TGCAAGATAGCCATTTCCTCACCGACGCCGACATGG...TCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp CAGGCTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTGGGTTGTGCCGCGGATTaGCCACCCAGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QAYTKSHVRNATSKSGHLGCAAD*PPSGCW
Trigger: CCAGCAACCACTGGGTGGTCAATCCGCGGCACAACC...CAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp CACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGTCCCAGGTCTCGGAAGCTaGCATACAGCTCGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HGWVAWLVGAHNYLWKRVPGLGS*HTARAS
Trigger: AGAAGCACGAGCTGTATGTCAGCTTCCGAGACCTGG...GACTCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp AACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCCAGCAGGAACAGGGGTaGCCAGAGCGCCACGAAGCT +
Preference number: 4 (lower is better)
Translates to: NFRVNFPFAQTPMCPPLAQQEQG*PERHEA
Trigger: AGCTTCGTGGCGCTCTGGGCACCCCTGTTCCTGCTG...GGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGATGGATGAAGCTCGAGTaGACCTCGTTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRWMKLE*TSLSRL
Trigger: CAGCCTGGACAACGAGGTGCACTCGAGCTTCATCCA...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCCAGCATGAACATGGGTaGCGAGTTGTGCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASQHEHG*RVVLAL
Trigger: CAGGGCAAGCACAACTCGGCACCCATGTTCATGCTG...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAAAAAGGCAGTTGGTCTaGTGGTTCCTGGCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRKRQLV*WFLAKA
Trigger: CGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTT...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp CACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGTCTCACCCAAGCTGGAGTaGAGTGGGACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HGWVAWLVGAHNYLWKRVSPKLE*SGTILA
Trigger: AGCCAAGATCGTCCCACTGCACTCCAGCTTGGGTGA...GACTCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp ATAGGGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGATGTGCAGTGCTCCTaGTCACCCCACTCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: IGRGRSHKRQLVCWFLAKDVQCS*SPHSRG
Trigger: TCCACGGGAGTGGGGTGAGCAGGAGCACTGCACATC...CTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp TCCCACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGGCCCAGCCTTGGAATaGCACTGCAGACAAAGACCA +
Preference number: 4 (lower is better)
Translates to: SHGWVAWLVGAHNYLWKRGPALE*HCRQRP
Trigger: TGGTCTTTGTCTGCAGTGGCATTCCAAGGCTGGGCC...TCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp CTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTGGTTAAGAGACAGCCACGGGTaGCCTTGCCAGGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LTPRATSEMPPPNRDTWLRDSHG*PCQGPA
Trigger: GGCTGGGCCCTGGCAAGGGCACCCGTGGCTGTCTCT...TAACCAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp GGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAAGCCTCTGGTCGCTGCTaGTGTTCTCATCCAGCGTCT +
Preference number: 4 (lower is better)
Translates to: GKVSQKAVGLLVPGQGEQASGRC*CSHPAS
Trigger: AGACGCTGGATGAGAACAGCAGCAGCGACCAGAGGC...TTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395864.7
CDS-3UTR CCA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCCTCCTCCACCGCCATaGCGTTGTACAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSPPPPP*RCTGPA
Trigger: TGCTGGACCTGTACAACGCCATGGCGGTGGAGGAGG...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGGATTGACCACCCAGTaGTTGCTGGTGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRGLTTQ*LLVAVM
Trigger: CATCACAGCCACCAGCAACCACTGGGTGGTCAATCC...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp GGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAATGTCTTGGAGCGGTTCTaGCTGCGCTGTTTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GRSHKRQLVCWFLAKASNVLERF*LRCLLP
Trigger: GGGGAGCAAACAGCGCAGCCAGAACCGCTCCAAGAC...ATTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCACGGCTGGGTGGCCTaGCTGGTAGGCGCTCATAAT +
Preference number: 4 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSHGWVA*LVGAHN
Trigger: ATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp CACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGTCTTACAGGCCTGCCTCTaGTCGCTGCTGCTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: HGWVAWLVGAHNYLWKRVLQACL*SLLLFS
Trigger: TGAGAACAGCAGCAGCGACCAGAGGCAGGCCTGTAA...GACTCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395864.7
CDS-3UTR TCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCTGTACAGGTCCAGCATaGACATGGGTGCCGAGTTGT +
Preference number: 4 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPCTGPA*TWVPSC
Trigger: ACAACTCGGCACCCATGTTCATGCTGGACCTGTACA...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCTGTACAGGTCCAGCATaGACATGGGTGCCGAGTTGT +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASCTGPA*TWVPSC
Trigger: ACAACTCGGCACCCATGTTCATGCTGGACCTGTACA...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp GCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCAAGGTTGTGCCGCGGATTaGCCACCCAGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AHNYLWKRVRAWLRLPSQGCAAD*PPSGCW
Trigger: CCAGCAACCACTGGGTGGTCAATCCGCGGCACAACC...TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp AGATCAACACACCGCCCTCCTCGGAGCAGACATTTGCTCTTTCCCCTCCCACTATCCCCGCCCTCCACTTaGCACAGCTTCTGTTTACGC +
Preference number: 4 (lower is better)
Translates to: RSTHRPPRSRHLLFPLPLSPPST*HSFCLR
Trigger: GCGTAAACAGAAGCTGTGTCAAGTGGAGGGCGGGGA...TAGTGGGAGGGGAAAGAGCAAATGTCTGCTCCGAGGAGGGCGGTGTGTTGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp CCACTGCAGACAAAGACCAGAGGGTCCACTGGGGCGATGTGCAGTGCTCCTGCTTTTGTGGCCGGAGGCTaGGTGCATACTATTTATGGG +
Preference number: 4 (lower is better)
Translates to: PLQTKTRGSTGAMCSAPAFVAGG*VHTIYG
Trigger: CCCATAAATAGTATGCACTCAGCCTCCGGCCACAAA...AGCAGGAGCACTGCACATCGCCCCAGTGGACCCTCTGGTCTTTGTCTGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp GGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAATGATCCGGAATTCGGCTaGCGTGACAGCTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GRSHKRQLVCWFLAKASNDPEFG*RDSFPF
Trigger: GAAGGGGAAGCTGTCACGGCAGCCGAATTCCGGATC...ATTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp CAGGCTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTGGCTGCTGCTGTTCTCTaGCACGTTGGCCATCCGCAG +
Preference number: 4 (lower is better)
Translates to: QAYTKSHVRNATSKSGHLAAAVL*HVGHPQ
Trigger: CTGCGGATGGCCAACGTGGCAGAGAACAGCAGCAGC...CAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCCTGACATACAGCTCGTaGTTCTTACAGGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPLTYSS*FLQACL
Trigger: GAGGCAGGCCTGTAAGAAGCACGAGCTGTATGTCAG...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GGTGTTTCCAGGAACTGTCTGAGTCAAGATGGAGAAACAGTCCCCCACAAGACCGCACAGACACCAATGTaGCCACCCCTTGCCACGCCC +
Preference number: 4 (lower is better)
Translates to: GVSRNCLSQDGETVPHKTAQTPM*PPLATP
Trigger: GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGC...GGTCTTGTGGGGGACTGTTTCTCCATCTTGACTCAGACAGTTCCTGGAAACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp GCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCAATGGGGCGATGTGCAGTaGTCCTGCTCACCCCACTCC +
Preference number: 4 (lower is better)
Translates to: AHNYLWKRVRAWLRLPSQWGDVQ*SCSPHS
Trigger: GGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCA...TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp CAGAGGCTGGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCTCCACTGGGGCGATGTaGAGTGCTCCTGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: QRLVGSENSHQEGSHKKPSTGAM*SAPAHP
Trigger: GGGGTGAGCAGGAGCACTGCACATCGCCCCAGTGGA...GGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp TCCTCCCACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAAGAGCCACGTCAGAAATaGCACCTCCAAATCGGGACA +
Preference number: 4 (lower is better)
Translates to: SSHGWVAWLVGAHNYLWKEPRQK*HLQIGT
Trigger: TGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTC...TTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAATGGGGCAAGCCCAAAATaGAGAGGATCTCGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRSHKRQLVCWFLAKASNGASPK*RGSRAA
Trigger: TGCAGCGCGAGATCCTCTCCATTTTGGGCTTGCCCC...ATTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp ATAGGGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGTGTTCTCTGCCACGTTaGCCATCCGCAGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: IGRGRSHKRQLVCWFLAKCSLPR*PSAGLP
Trigger: AGGAAGCCCTGCGGATGGCCAACGTGGCAGAGAACA...CTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAATTGGTCTGCTGGTTCCTaGCCAAGGCGAGCAATGGAG +
Preference number: 4 (lower is better)
Translates to: GRSHKRQLVCWFLAKASNWSAGS*PRRAME
Trigger: CTCCATTGCTCGCCTTGGCCAGGAACCAGCAGACCA...ATTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp GCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCAAGACCAGAGGGTCCACTaGGGCGATGTGCAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: AHNYLWKRVRAWLRLPSQDQRVH*GDVQCS
Trigger: GGAGCACTGCACATCGCCCCAGTGGACCCTCTGGTC...TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp AGGCAGGCTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACCCAGGTCTCGGAAGCTaGCATACAGCTCGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RQAYTKSHVRNATSKSGHPGLGS*HTARAS
Trigger: AGAAGCACGAGCTGTATGTCAGCTTCCGAGACCTGG...GTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAGCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp ATAGGGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGTGGCCCCAAAGGGTCTaGATTCTCGGAGGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: IGRGRSHKRQLVCWFLAKWPQRV*ILGGAS
Trigger: ACTAGCTCCTCCGAGAATTCAGACCCTTTGGGGCCA...CTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp AAAACAGAGCCCCGGTGTTTCCAGGAACTGTCTGAGTCAAGATGGAGAAACAGTGAGAGGATCTCGCGCTaGATCTCCCGCCGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KTEPRCFQELSESRWRNSERISR*ISRRSW
Trigger: CCAGGAGCGGCGGGAGATGCAGCGCGAGATCCTCTC...ACTGTTTCTCCATCTTGACTCAGACAGTTCCTGGAAACACCGGGGCTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp CAAGACCGGGTTCCACATGGCCACAGTTTTCGATCACCTTGTTTTCTTTACAGATTCTTCCCGCTCCTCTaGCGCTCTCGCCCTCGGGCG +
Preference number: 4 (lower is better)
Translates to: QDRVPHGHSFRSPCFLYRFFPLL*RSRPRA
Trigger: CGCCCGAGGGCGAGAGCGCCAGAGGAGCGGGAAGAA...TCTGTAAAGAAAACAAGGTGATCGAAAACTGTGGCCATGTGGAACCCGGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCTCGATGGTGGTAGCGTaGGTGGAAGAATTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPSMVVA*VEEFLV
Trigger: GACAAGGAATTCTTCCACCCACGCTACCACCATCGA...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCTTACAGGCCTGCCTCTaGTCGCTGCTGCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSLQACL*SLLLFS
Trigger: AGAGAACAGCAGCAGCGACCAGAGGCAGGCCTGTAA...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGGCCAAGGCGAGCAATaGAGGATCCAGAAAAACTTG +
Preference number: 4 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRGQGEQ*RIQKNL
Trigger: CAAGTTTTTCTGGATCCTCCATTGCTCGCCTTGGCC...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCGGCCAAGGCGAGCAATaGAGGATCCAGAAAAACTTG +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASGQGEQ*RIQKNL
Trigger: CAAGTTTTTCTGGATCCTCCATTGCTCGCCTTGGCC...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp CACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGTCTCCCAGCCAATGACCTaGCCCGGCCATTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: HGWVAWLVGAHNYLWKRVSQPMT*PGHFSL
Trigger: TAAAGAAAAATGGCCGGGCCAGGTCATTGGCTGGGA...GACTCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGACCTCCCACTAGATCTTaGATTTGGGCAAACCTCGGT +
Preference number: 4 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRPPTRS*IWANLG
Trigger: ACCGAGGTTTGCCCAAATCCAAGATCTAGTGGGAGG...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp CCACTGCAGACAAAGACCAGAGGGTCCACTGGGGCGATGTGCAGTGCTCCTGCTCTGTCTGAGTCAAGATaGAGAAACAGTCCCCCACAA +
Preference number: 4 (lower is better)
Translates to: PLQTKTRGSTGAMCSAPALSESR*RNSPPQ
Trigger: TTGTGGGGGACTGTTTCTCCATCTTGACTCAGACAG...AGCAGGAGCACTGCACATCGCCCCAGTGGACCCTCTGGTCTTTGTCTGCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp GCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCAAGGTTGCTGGTGGCTGTaGTGTCAAACACCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AHNYLWKRVRAWLRLPSQGCWWL*CQTPAS
Trigger: GCTGGCTGGTGTTTGACATCACAGCCACCAGCAACC...TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp GCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCAAACTCCTGACCTCAAATaGTCCGCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: AHNYLWKRVRAWLRLPSQTPDLK*SAHLSL
Trigger: GAGGCTGAGGTGGGCGGATCATTTGAGGTCAGGAGT...TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp GTTTCATTTCTGCCACGGCAAATCCAGCTGAACAACAGAACATATTTTTCCTCCCGCTCGGTCACTTGCTaGAGACGGGCCCCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: VSFLPRQIQLNNRTYFSSRSVTC*RRAPLR
Trigger: GCGCAGCGGGGCCCGTCTGCAGCAAGTGACCGAGCG...GGAGGAAAAATATGTTCTGTTGTTCAGCTGGATTTGCCGTGGCAGAAATGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp CAGGCTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTGCAGCATGAACATGGGTaGCGAGTTGTGCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: QAYTKSHVRNATSKSGHLQHEHG*RVVLAL
Trigger: CAGGGCAAGCACAACTCGGCACCCATGTTCATGCTG...CAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp CTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTGGTTAGCCTCTGGTCGCTGCTaGTGTTCTCTGCCACGTTGG +
Preference number: 4 (lower is better)
Translates to: LTPRATSEMPPPNRDTWLASGRC*CSLPRW
Trigger: CCAACGTGGCAGAGAACAGCAGCAGCGACCAGAGGC...TAACCAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp CAGAGGCTGGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCTGCTTCTTACAGGCCTaGCTCTGGTCGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QRLVGSENSHQEGSHKKPCFLQA*LWSLLL
Trigger: CAGCAGCAGCGACCAGAGGCAGGCCTGTAAGAAGCA...GGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCCTGCTAGGTTTTGCCTaGACAGCTTGTAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASLLGFA*TACRIL
Trigger: CAAGATCCTACAAGCTGTGCAGGCAAAACCTAGCAG...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GTCCACTGGGGCGATGTGCAGTGCTCCTGCTCACCCCACTCCCGTGGAGAACTATCAGACCTCCTATTATaGCATCTCCCCCTTAATTCA +
Preference number: 4 (lower is better)
Translates to: VHWGDVQCSCSPHSRGELSDLLL*HLPLNS
Trigger: TGAATTAAGGGGGAGATGGCATAATAGGAGGTCTGA...TAGTTCTCCACGGGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCAGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCAAGGGGCAAGCCCAAAATaGAGAGGATCTCGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: AHNYLWKRVRAWLRLPSQGASPK*RGSRAA
Trigger: TGCAGCGCGAGATCCTCTCCATTTTGGGCTTGCCCC...TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp AATTTCACATGGATTTACTACCACTGGGGCGAGGTGAAAAGCCAATCCCAAATGTGCGGGCGCGGGCGGTaGGGCAAGCCCAAAATGGAG +
Preference number: 4 (lower is better)
Translates to: NFTWIYYHWGEVKSQSQMCGRGR*GKPKME
Trigger: CTCCATTTTGGGCTTGCCCCACCGCCCGCGCCCGCA...CATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCATGTGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCCCCCTTCTGGGATCTTaGAAAGATCAAACCGGAACT +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASPLLGS*KDQTGT
Trigger: AGTTCCGGTTTGATCTTTCCAAGATCCCAGAAGGGG...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp TTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCGGTTCTTGGGCGTCTTaGAGCGGTTCTGGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: LQELPGQFSFRTDTNVPTGSWAS*SGSGCA
Trigger: AGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACC...GGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCTGGATTTACTACCACTaGGGCGAGGTGAAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASWIYYH*GEVKSQ
Trigger: TTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCA...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCGCACCTGATAAACGCTaGTCCGGAACGTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSAPDKR*SGTSHC
Trigger: ACAATGAGACGTTCCGGATCAGCGTTTATCAGGTGC...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCTGTATTTCTTCAGGATaGCGTTGGAGCTGTCATCGA +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASCISSG*RWSCHR
Trigger: TCGATGACAGCTCCAACGTCATCCTGAAGAAATACA...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GCCACTGAAAAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCCGCTCGGTCACTTGCTaGAGACGGGCCCCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ATEKLIKSHMLLMFPNTLRSVTC*RRAPLR
Trigger: GCGCAGCGGGGCCCGTCTGCAGCAAGTGACCGAGCG...GAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTTTTCAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GGTGTTTCCAGGAACTGTCTGAGTCAAGATGGAGAAACAGTCCCCCACAAGACCTGGATGAAGCTCGAGTaGACCTCGTTGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GVSRNCLSQDGETVPHKTWMKLE*TSLSRL
Trigger: CAGCCTGGACAACGAGGTGCACTCGAGCTTCATCCA...GGTCTTGTGGGGGACTGTTTCTCCATCTTGACTCAGACAGTTCCTGGAAACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp GGTGTTTCCAGGAACTGTCTGAGTCAAGATGGAGAAACAGTCCCCCACAAGACCCTGGAAACGAGTCCGTaGATGGCTGAGACTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GVSRNCLSQDGETVPHKTLETSP*MAETSQ
Trigger: CTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAG...GGTCTTGTGGGGGACTGTTTCTCCATCTTGACTCAGACAGTTCCTGGAAACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp GCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCAACTGGAAACGAGTCCGTaGATGGCTGAGACTTCCCAG +
Preference number: 4 (lower is better)
Translates to: AHNYLWKRVRAWLRLPSQLETSP*MAETSQ
Trigger: CTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAG...TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp CACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGTCCCAATCCCAAATGTCTaGGGGTATTTCACACACCTA +
Preference number: 4 (lower is better)
Translates to: HGWVAWLVGAHNYLWKRVPIPNV*GYFTHL
Trigger: TAGGTGTGTGAAATACCCGCAGACATTTGGGATTGG...GACTCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp AGGCAGGCTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTGGCCGGAGGCTGAGTaGATACTATTTATGGGACTC +
Preference number: 4 (lower is better)
Translates to: RQAYTKSHVRNATSKSGHWPEAE*ILFMGL
Trigger: GAGTCCCATAAATAGTATGCACTCAGCCTCCGGCCA...GTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAGCCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGACAGCTTCCCCTTCTaGGATCTTGGAAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRDSFPF*DLGKIK
Trigger: TTTGATCTTTCCAAGATCCCAGAAGGGGAAGCTGTC...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp AAAACAGAGCCCCGGTGTTTCCAGGAACTGTCTGAGTCAAGATGGAGAAACAGTGCTGTTTGCTCCCCGTaGACCGGATGCTGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: KTEPRCFQELSESRWRNSAVCSP*TGCCGS
Trigger: ACTTCCGCAGCATCCGGTCCACGGGGAGCAAACAGC...ACTGTTTCTCCATCTTGACTCAGACAGTTCCTGGAAACACCGGGGCTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CAA 72 bp CAAAGATCAACACACCGCCCTCCTCGGAGCAGACATTaGCTCTTTCCCCTCCCACTAGATCTTGGATTTGGG +
Preference number: 4 (lower is better)
Translates to: QRSTHRPPRSRH*LFPLPLDLGFG
Trigger: CCCAAATCCAAGATCTAGTGGGAGGGGAAAGAGCAAATGTCTGCTCCGAGGAGGGCGGTGTGTTGATCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp TTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCTGGCCCCAAAGGGTCTaGATTCTCGGAGGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: LQELPGQFSFRTDTNVPTWPQRV*ILGGAS
Trigger: ACTAGCTCCTCCGAGAATTCAGACCCTTTGGGGCCA...GGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp TTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCATCAGGGTCTGCAAATaGAGAGACAGCCACGGGTGC +
Preference number: 4 (lower is better)
Translates to: LQELPGQFSFRTDTNVPTIRVCK*RDSHGC
Trigger: GCACCCGTGGCTGTCTCTTCATTTGCAGACCCTGAT...GGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp GTCCACTGGGGCGATGTGCAGTGCTCCTGCTCACCCCACTCCCGTGGAGAACTAAACAAGGCTTCTATTTaGAATGTAAGTCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: VHWGDVQCSCSPHSRGELNKASI*NVSPAH
Trigger: ATGTGCTGGACTTACATTGCAAATAGAAGCCTTGTT...TAGTTCTCCACGGGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCAGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp CAGAGGCTGGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCGCACCTGATAAACGCTaGTCCGGAACGTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: QRLVGSENSHQEGSHKKPAPDKR*SGTSHC
Trigger: ACAATGAGACGTTCCGGATCAGCGTTTATCAGGTGC...GGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp GGATCTTGTTCATTGGATGCTGCCACTGAAAAACTGATCAAAAGCCATATGCTGCCGCCAACTTGGGGTTaGTGCTCTGCCCATCCAGCG +
Preference number: 4 (lower is better)
Translates to: GSCSLDAATEKLIKSHMLPPTWG*CSAHPA
Trigger: CGCTGGATGGGCAGAGCATCAACCCCAAGTTGGCGG...CAGCATATGGCTTTTGATCAGTTTTTCAGTGGCAGCATCCAATGAACAAGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp GTTTCATTTCTGCCACGGCAAATCCAGCTGAACAACAGAACATATTTTTCCTCCAGCCTTCAGGCGCGATaGTCCAGTCCTGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSFLPRQIQLNNRTYFSSSLQAR*SSPASP
Trigger: TGGGCTGGCAGGACTGGATCATCGCGCCTGAAGGCT...GGAGGAAAAATATGTTCTGTTGTTCAGCTGGATTTGCCGTGGCAGAAATGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCTGTATTTCTTCAGGATaGCGTTGGAGCTGTCATCGA +
Preference number: 4 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSCISSG*RWSCHR
Trigger: TCGATGACAGCTCCAACGTCATCCTGAAGAAATACA...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp ATAGGGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGCTGCCACTGAAAAACTaGTCAAAAGCCATATGCTGC +
Preference number: 4 (lower is better)
Translates to: IGRGRSHKRQLVCWFLAKLPLKN*SKAICC
Trigger: GCAGCATATGGCTTTTGATCAGTTTTTCAGTGGCAG...CTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR TCA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCCACGGCAAATCCAGCTaGACAACAGAACATATTTTT +
Preference number: 4 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASHGKSS*TTEHIF
Trigger: AAAAATATGTTCTGTTGTTCAGCTGGATTTGCCGTG...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp GGTGAAAAGCCAATCCCAAATGTCTGCGGGTATTTCACACACCTAGTTTCATTTTGGAGCGGTTCTGGCTaGGCTGTTTGCTCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GEKPIPNVCGYFTHLVSFWSGSG*AVCSPW
Trigger: CCACGGGGAGCAAACAGCGCAGCCAGAACCGCTCCA...AAATGAAACTAGGTGTGTGAAATACCCGCAGACATTTGGGATTGGCTTTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp TTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCTGACATACAGCTCGTaGTTCTTACAGGCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: LQELPGQFSFRTDTNVPTLTYSS*FLQACL
Trigger: GAGGCAGGCCTGTAAGAAGCACGAGCTGTATGTCAG...GGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp ATAGGGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGACAACAGGGTTGAGTTaGAAGTTCCATCCTACTTGC +
Preference number: 4 (lower is better)
Translates to: IGRGRSHKRQLVCWFLAKTTGLS*KFHPTC
Trigger: GCAAGTAGGATGGAACTTGCAACTCAACCCTGTTGT...CTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp TTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCGCCTTGGAATGCCACTaGAGACAAAGACCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LQELPGQFSFRTDTNVPTALECH*RQRPEG
Trigger: ACCCTCTGGTCTTTGTCTGCAGTGGCATTCCAAGGC...GGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp CTCCACTTGACACAGCTTCTGTTTACGCATCAGGATAAACCGAGAAATGGGGATGGGCTTCCTGGTTCTTaGGCGTCTTGGAGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: LHLTQLLFTHQDKPRNGDGLPGS*ASWSGS
Trigger: AGAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCC...ATCCCCATTTCTCGGTTTATCCTGATGCGTAAACAGAAGCTGTGTCAAGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp TTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCAAACGAGTCCGTGCATaGCTGAGACTTCCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LQELPGQFSFRTDTNVPTKRVRA*LRLPSQ
Trigger: TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTT...GGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp CAGAGGCTGGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCTGCAACCTCCACCTCTaGGGTTCAAGCAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: QRLVGSENSHQEGSHKKPCNLHL*GSSNSP
Trigger: AGGAGAATTGCTTGAACCCCAGAGGTGGAGGTTGCA...GGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp AGGCAGGCTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACAGTGCATACTATTTATaGGACTCACCAGCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: RQAYTKSHVRNATSKSGHSAYYL*DSPAKA
Trigger: TGCCTTGGCTGGTGAGTCCCATAAATAGTATGCACT...GTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAGCCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CAA 72 bp CTGTGCCCGGCCCATTGGTGCTTCTTAACAACAGGGTaGAGTTGCAAGTTCCATCCTACTTGCTGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LCPAHWCFLTTG*SCKFHPTCCPC
Trigger: ACAAGGACAGCAAGTAGGATGGAACTTGCAACTCAACCCTGTTGTTAAGAAGCACCAATGGGCCGGGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp AAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCACACCTTTACCTCGTTGTCCAGGCTaGAGTCGGCCAGGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: KLIKSHMLLMFPNTLTPLPRCPG*SRPGRS
Trigger: GCTCCGCCCTGGCCGACTTCAGCCTGGACAACGAGG...TAAAGGTGTGAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp GGATCTTGTTCATTGGATGCTGCCACTGAAAAACTGATCAAAAGCCATATGCTGGCTCTCCCAGCCTTGTaGGCCCTGGATCGCACAAGA +
Preference number: 4 (lower is better)
Translates to: GSCSLDAATEKLIKSHMLALPAL*ALDRTR
Trigger: TCTTGTGCGATCCAGGGCGCACAAGGCTGGGAGAGC...CAGCATATGGCTTTTGATCAGTTTTTCAGTGGCAGCATCCAATGAACAAGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp AAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCACACCTTTAGTGCCGAGTTGTGCTTaGCCTGGAGGTGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: KLIKSHMLLMFPNTLTPLVPSCA*PGGAGA
Trigger: CGCGCCCGCACCTCCAGGGCAAGCACAACTCGGCAC...TAAAGGTGTGAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp TTTACAGGTTTAAATGTACAAATGATGCTAACCAGAGGCTGGTTGGGTCAGAAATCCCCGTGGACCGGATaGTGCGGAAGTGGACCTCCG +
Preference number: 4 (lower is better)
Translates to: FTGLNVQMMLTRGWLGQKSPWTG*CGSGPP
Trigger: CGGAGGTCCACTTCCGCAGCATCCGGTCCACGGGGA...TTTCTGACCCAACCAGCCTCTGGTTAGCATCATTTGTACATTTAAACCTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp GGATCTTGTTCATTGGATGCTGCCACTGAAAAACTGATCAAAAGCCATATGCTGGCGATGATCCAGTCCTaGCAGCCCAGGTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: GSCSLDAATEKLIKSHMLAMIQS*QPRSRK
Trigger: CTTCCGAGACCTGGGCTGGCAGGACTGGATCATCGC...CAGCATATGGCTTTTGATCAGTTTTTCAGTGGCAGCATCCAATGAACAAGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCTCAAAAGCCATATGCTaGTCATGTTTCCTAATACTC +
Preference number: 4 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPSKAIC*SCFLIL
Trigger: GAGTATTAGGAAACATGAGCAGCATATGGCTTTTGA...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp AGGCAGGCTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTGTCCTTGTCCCCTCTaGAATTTCACATGGATTTAC +
Preference number: 4 (lower is better)
Translates to: RQAYTKSHVRNATSKSGHCPCPL*NFTWIY
Trigger: GTAAATCCATGTGAAATTGCAGAGGGGACAAGGACA...GTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAGCCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCAAGCTCATAATTACCTCTaGAAACGAGTCCGTGCATGG +
Preference number: 4 (lower is better)
Translates to: AHNYLWKRVRAWLRLPSQAHNYL*KRVRAW
Trigger: CCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC...TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp GGTGAAAAGCCAATCCCAAATGTCTGCGGGTATTTCACACACCTAGTTTCATTTCACGGCTGGGTGGCCTaGCTGGTAGGCGCTCATAAT +
Preference number: 4 (lower is better)
Translates to: GEKPIPNVCGYFTHLVSFHGWVA*LVGAHN
Trigger: ATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG...AAATGAAACTAGGTGTGTGAAATACCCGCAGACATTTGGGATTGGCTTTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp CAGAGGCTGGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCATGCTAACCAGAGGCTaGTTGGGTCAGAAAACTCAC +
Preference number: 4 (lower is better)
Translates to: QRLVGSENSHQEGSHKKPMLTRG*LGQKTH
Trigger: GTGAGTTTTCTGACCCAACCAGCCTCTGGTTAGCAT...GGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp AATTTCACATGGATTTACTACCACTGGGGCGAGGTGAAAAGCCAATCCCAAATGAGACTTCCCAGCCAATaGCCTGGCCCGGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: NFTWIYYHWGEVKSQSQMRLPSQ*PGPAIF
Trigger: AAAAATGGCCGGGCCAGGTCATTGGCTGGGAAGTCT...CATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCATGTGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp CTCCACTTGACACAGCTTCTGTTTACGCATCAGGATAAACCGAGAAATGGGGATACCACTGGGGCGAGGTaGAAAGCCAATCCCAAATGT +
Preference number: 4 (lower is better)
Translates to: LHLTQLLFTHQDKPRNGDTTGAR*KANPKC
Trigger: ACATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGT...ATCCCCATTTCTCGGTTTATCCTGATGCGTAAACAGAAGCTGTGTCAAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp TACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCGTTTGCAGAGACTTCTaGTCAGGGTCTGCAAATGAA +
Preference number: 4 (lower is better)
Translates to: YRNFRVNFPFAQTPMCPPVCRDF*SGSANE
Trigger: TTCATTTGCAGACCCTGATCAGAAGTCTCTGCAAAC...GGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp GGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCAATCAAAAGCCATATGCTaGTCATGTTTCCTAATACTC +
Preference number: 4 (lower is better)
Translates to: GKVSQKAVGLLVPGQGEQSKAIC*SCFLIL
Trigger: GAGTATTAGGAAACATGAGCAGCATATGGCTTTTGA...TTGCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp CTGTGCCCGGCCCATTGGTGCTTCTTAACAACAGGGTTGAGTTGCAAGTTCCATGACAGCTTCCCCTTCTaGGATCTTGGAAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: LCPAHWCFLTTGLSCKFHDSFPF*DLGKIK
Trigger: TTTGATCTTTCCAAGATCCCAGAAGGGGAAGCTGTC...ATGGAACTTGCAACTCAACCCTGTTGTTAAGAAGCACCAATGGGCCGGGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp AATTTCACATGGATTTACTACCACTGGGGCGAGGTGAAAAGCCAATCCCAAATGGGATTGACCACCCAGTaGTTGCTGGTGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: NFTWIYYHWGEVKSQSQMGLTTQ*LLVAVM
Trigger: CATCACAGCCACCAGCAACCACTGGGTGGTCAATCC...CATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCATGTGAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GCCACTGAAAAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCCGGATGCTGCGGAAGTaGACCTCCGTGGCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: ATEKLIKSHMLLMFPNTLRMLRK*TSVALK
Trigger: CTTCAAGGCCACGGAGGTCCACTTCCGCAGCATCCG...GAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTTTTCAGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GCCACTGAAAAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCAGGCAGTTGGTCTGCTaGTTCCTGGCCAAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: ATEKLIKSHMLLMFPNTLRQLVC*FLAKAS
Trigger: GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCT...GAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTTTTCAGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR CAA 72 bp AGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTaGGTTAGGATGTCACCCTCAACAAGGCTTCTATTT +
Preference number: 4 (lower is better)
Translates to: SHVRNATSKSGH*VRMSPSTRLLF
Trigger: AAATAGAAGCCTTGTTGAGGGTGACATCCTAACCAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp GTTTCATTTCTGCCACGGCAAATCCAGCTGAACAACAGAACATATTTTTCCTCCCCATGTCGGCGTCGGTaGGGAAATGGCTATCTTGCA +
Preference number: 4 (lower is better)
Translates to: VSFLPRQIQLNNRTYFSSPCRRR*GNGYLA
Trigger: TGCAAGATAGCCATTTCCTCACCGACGCCGACATGG...GGAGGAAAAATATGTTCTGTTGTTCAGCTGGATTTGCCGTGGCAGAAATGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp CTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTGGTTACTGCCACTGAAAAACTaGTCAAAAGCCATATGCTGC +
Preference number: 4 (lower is better)
Translates to: LTPRATSEMPPPNRDTWLLPLKN*SKAICC
Trigger: GCAGCATATGGCTTTTGATCAGTTTTTCAGTGGCAG...TAACCAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp GGATCTTGTTCATTGGATGCTGCCACTGAAAAACTGATCAAAAGCCATATGCTGAGACTTCCCAGCCAATaGCCTGGCCCGGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: GSCSLDAATEKLIKSHMLRLPSQ*PGPAIF
Trigger: AAAAATGGCCGGGCCAGGTCATTGGCTGGGAAGTCT...CAGCATATGGCTTTTGATCAGTTTTTCAGTGGCAGCATCCAATGAACAAGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp AAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCACACCTTTAATGGGTGCCGAGTTGTaGTTGCCCTGGAGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: KLIKSHMLLMFPNTLTPLMGAEL*LPWRCG
Trigger: CCCGCACCTCCAGGGCAAGCACAACTCGGCACCCAT...TAAAGGTGTGAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR GCA 90 bp AATTTCACATGGATTTACTACCACTGGGGCGAGGTGAAAAGCCAATCCCAAATGTGCCCGGCCCATTGGTaGTTCTTAACAACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NFTWIYYHWGEVKSQSQMCPAHW*FLTTGL
Trigger: CAACCCTGTTGTTAAGAAGCACCAATGGGCCGGGCA...CATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCATGTGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GCCACTGAAAAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCGAAAACTGTAGGGAATaGAGAGGGACCTCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ATEKLIKSHMLLMFPNTLENCRE*RGTSPP
Trigger: GGGCGGGGAGGTCCCTCTCCATTCCCTACAGTTTTC...GAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTTTTCAGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp AAAACAGAGCCCCGGTGTTTCCAGGAACTGTCTGAGTCAAGATGGAGAAACAGTCCAAATCGGGACACTTaGTTAGGATGTCACCCTCAA +
Preference number: 4 (lower is better)
Translates to: KTEPRCFQELSESRWRNSPNRDT*LGCHPQ
Trigger: TTGAGGGTGACATCCTAACCAAGTGTCCCGATTTGG...ACTGTTTCTCCATCTTGACTCAGACAGTTCCTGGAAACACCGGGGCTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp ATTGTGACATTTATTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACAAAAGGCAGTTGGTCTaGTGGTTCCTGGCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: IVTFITGTSGSIFLSHRHKRQLV*WFLAKA
Trigger: CGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTT...GTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAATAAATGTCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp CTCCACTTGACACAGCTTCTGTTTACGCATCAGGATAAACCGAGAAATGGGGATCTGCTAGGTTTTGCCTaGACAGCTTGTAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: LHLTQLLFTHQDKPRNGDLLGFA*TACRIL
Trigger: CAAGATCCTACAAGCTGTGCAGGCAAAACCTAGCAG...ATCCCCATTTCTCGGTTTATCCTGATGCGTAAACAGAAGCTGTGTCAAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp CTCCACTTGACACAGCTTCTGTTTACGCATCAGGATAAACCGAGAAATGGGGATGCTCATAATTACCTCTaGAAACGAGTCCGTGCATGG +
Preference number: 4 (lower is better)
Translates to: LHLTQLLFTHQDKPRNGDAHNYL*KRVRAW
Trigger: CCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC...ATCCCCATTTCTCGGTTTATCCTGATGCGTAAACAGAAGCTGTGTCAAGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GCCACTGAAAAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCCTGTGCCCGGCCCATTaGTGCTTCTTAACAACAGGG +
Preference number: 4 (lower is better)
Translates to: ATEKLIKSHMLLMFPNTLLCPAH*CFLTTG
Trigger: CCCTGTTGTTAAGAAGCACCAATGGGCCGGGCACAG...GAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTTTTCAGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp ATTGTGACATTTATTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACCTCACCCCACTCCCGTaGAGAACTAGGCTTCATTGG +
Preference number: 4 (lower is better)
Translates to: IVTFITGTSGSIFLSHRHLTPLP*RTRLHW
Trigger: CCAATGAAGCCTAGTTCTCCACGGGAGTGGGGTGAG...GTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAATAAATGTCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GGTGAAAAGCCAATCCCAAATGTCTGCGGGTATTTCACACACCTAGTTTCATTTAGACCGGGTTCCACATaGCCACAGTTTTCGATCACC +
Preference number: 4 (lower is better)
Translates to: GEKPIPNVCGYFTHLVSFRPGST*PQFSIT
Trigger: GGTGATCGAAAACTGTGGCCATGTGGAACCCGGTCT...AAATGAAACTAGGTGTGTGAAATACCCGCAGACATTTGGGATTGGCTTTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp GGATCTTGTTCATTGGATGCTGCCACTGAAAAACTGATCAAAAGCCATATGCTGTCGACGCAACAGCTGTaGGTACATTGGTCCAACCAT +
Preference number: 4 (lower is better)
Translates to: GSCSLDAATEKLIKSHMLSTQQL*VHWSNH
Trigger: ATGGTTGGACCAATGTACTCACAGCTGTTGCGTCGA...CAGCATATGGCTTTTGATCAGTTTTTCAGTGGCAGCATCCAATGAACAAGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR TCA 90 bp AAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCACACCTTTAAATACTCCTCCCCAGTaGCTAGAGAGTGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KLIKSHMLLMFPNTLTPLNTPPQ*LESGGC
Trigger: GCAGCCTCCACTCTCTAGTCACTGGGGAGGAGTATT...TAAAGGTGTGAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR GCA 90 bp GGTGTTTCCAGGAACTGTCTGAGTCAAGATGGAGAAACAGTCCCCCACAAGACCTGTTTTCTTTACAGATaGAGAAAACGTTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: GVSRNCLSQDGETVPHKTCFLYR*RKRLQT
Trigger: TGTCTGCAAACGTTTTCTGCATCTGTAAAGAAAACA...GGTCTTGTGGGGGACTGTTTCTCCATCTTGACTCAGACAGTTCCTGGAAACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GCCACTGAAAAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCTCCCAGCCAATGACCTaGCCCGGCCATTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: ATEKLIKSHMLLMFPNTLSQPMT*PGHFSL
Trigger: TAAAGAAAAATGGCCGGGCCAGGTCATTGGCTGGGA...GAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTTTTCAGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp CAAGACCGGGTTCCACATGGCCACAGTTTTCGATCACCTTGTTTTCTTTACAGAACTAGATCTTGGATTTaGGCAAACCTCGGTAAACAC +
Preference number: 4 (lower is better)
Translates to: QDRVPHGHSFRSPCFLYRTRSWI*ANLGKH
Trigger: GTGTTTACCGAGGTTTGCCCAAATCCAAGATCTAGT...TCTGTAAAGAAAACAAGGTGATCGAAAACTGTGGCCATGTGGAACCCGGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
3UTR CAA 72 bp GGTTTAAATGTACAAATGATGCTAACCAGAGGCTGGTaGGGTCAGAAAACTCACACCAAGAGGGATCACACA +
Preference number: 4 (lower is better)
Translates to: GLNVQMMLTRGW*GQKTHTKRDHT
Trigger: TGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTGGTTAGCATCATTTGTACATTTAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp TTTACAGGTTTAAATGTACAAATGATGCTAACCAGAGGCTGGTTGGGTCAGAAATCGATGGTGGTAGCGTaGGTGGAAGAATTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: FTGLNVQMMLTRGWLGQKSMVVA*VEEFLV
Trigger: GACAAGGAATTCTTCCACCCACGCTACCACCATCGA...TTTCTGACCCAACCAGCCTCTGGTTAGCATCATTTGTACATTTAAACCTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CCA 90 bp GCCACTGAAAAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCCCCCTTCTGGGATCTTaGAAAGATCAAACCGGAACT +
Preference number: 4 (lower is better)
Translates to: ATEKLIKSHMLLMFPNTLPLLGS*KDQTGT
Trigger: AGTTCCGGTTTGATCTTTCCAAGATCCCAGAAGGGG...GAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTTTTCAGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CCA 90 bp AAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCACACCTTTAAAACGAGTCCGTGCATaGCTGAGACTTCCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: KLIKSHMLLMFPNTLTPLKRVRA*LRLPSQ
Trigger: TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTT...TAAAGGTGTGAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
3UTR CAA 72 bp TATTATGCCATCTCCCCCTTAATTCAAGGAGCAAATTaGTTTGCAGAGACTTCTGATCAGGGTCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: YYAISPLIQGAN*FAETSDQGLQM
Trigger: CATTTGCAGACCCTGATCAGAAGTCTCTGCAAACAAATTTGCTCCTTGAATTAAGGGGGAGATGGCATAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS CCA 90 bp TACGCGCTACCCGGGCTCCGGGCTCCGGGCCCGCACCGCCCCAGGTaGCAGAGGGGGCAGGCGGCCGTCCGCGCCGCTCGGTCACTTGCT +
Preference number: 5 (lower is better)
Translates to: YALPGLRAPGPHRPR*QRGQAAVRAARSLA
Trigger: AGCAAGTGACCGAGCGGCGCGGACGGCCGCCTGCCCCCTCTGCCACCTGGGGCGGTGCGGGCCCGGAGCCCGGAGCCCGGGTAGCGCGTA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS GCA 90 bp AGCGCCACGAAGCTGTGCGGCGCCGCAGCTCGCAGTGAGCGCACGTaGATCGCGCCGGCTCTACGCGCTACCCGGGCTCCGGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: SATKLCGAAARSERT*IAPALRATRAPGSG
Trigger: CCCGGAGCCCGGAGCCCGGGTAGCGCGTAGAGCCGGCGCGATGCACGTGCGCTCACTGCGAGCTGCGGCGCCGCACAGCTTCGTGGCGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS TCA 90 bp GGGTGCCCAGAGCGCCACGAAGCTGTGCGGCGCCGCAGCTCGCAGTaGGCGCACGTGCATCGCGCCGGCTCTACGCGCTACCCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: GCPERHEAVRRRSSQ*AHVHRAGSTRYPGS
Trigger: GGAGCCCGGGTAGCGCGTAGAGCCGGCGCGATGCACGTGCGCTCACTGCGAGCTGCGGCGCCGCACAGCTTCGTGGCGCTCTGGGCACCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS GCA 90 bp GCGGAGCGCAGCAGGAACAGGGGTGCCCAGAGCGCCACGAAGCTGTaGGGCGCCGCAGCTCGCAGTGAGCGCACGTGCATCGCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: AERSRNRGAQSATKL*GAAARSERTCIAPA
Trigger: AGCCGGCGCGATGCACGTGCGCTCACTGCGAGCTGCGGCGCCGCACAGCTTCGTGGCGCTCTGGGCACCCCTGTTCCTGCTGCGCTCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS GCA 90 bp TCCCGCCGCTCCTGGCTGCGGAGGCGCCGGTGGATGAAGCTCGAGTaGACCTCGTTGTCCAGGCTGAAGTCGGCCAGGGCGGAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: SRRSWLRRRRWMKLE*TSLSRLKSARAERS
Trigger: GCTGCGCTCCGCCCTGGCCGACTTCAGCCTGGACAACGAGGTGCACTCGAGCTTCATCCACCGGCGCCTCCGCAGCCAGGAGCGGCGGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS GCA 90 bp GGGCGCGGGCGGTGGGGCAAGCCCAAAATGGAGAGGATCTCGCGCTaGATCTCCCGCCGCTCCTGGCTGCGGAGGCGCCGGTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: GRGRWGKPKMERISR*ISRRSWLRRRRWMK
Trigger: CTTCATCCACCGGCGCCTCCGCAGCCAGGAGCGGCGGGAGATGCAGCGCGAGATCCTCTCCATTTTGGGCTTGCCCCACCGCCCGCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS GCA 90 bp GGCTGGTGGGCTCCAGGCTTTGGGGCAGGAGCGCTTGCCCCTGGGTaGCCTGCCCTCGCGGCCTGCATGCCTTGTGGAGTCACTCATTCA +
Preference number: 5 (lower is better)
Translates to: GWWAPGFGAGALAPG*PALAACMPCGVTHS
Trigger: TGAATGAGTGACTCCACAAGGCATGCAGGCCGCGAGGGCAGGGCACCCAGGGGCAAGCGCTCCTGCCCCAAAGCCTGGAGCCCACCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS GCA 90 bp GGGCAGGAGCGCTTGCCCCTGGGTGCCCTGCCCTCGCGGCCTGCATaGCTTGTGGAGTCACTCATTCATTCAGCCATTGCTAGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GQERLPLGALPSRPA*LVESLIHSAIARGC
Trigger: GCAGCCCCTAGCAATGGCTGAATGAATGAGTGACTCCACAAGGCATGCAGGCCGCGAGGGCAGGGCACCCAGGGGCAAGCGCTCCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS GCA 90 bp GTGGGCTCCAGGCTTTGGGGCAGGAGCGCTTGCCCCTGGGTGCCCTaGCCTCGCGGCCTGCATGCCTTGTGGAGTCACTCATTCATTCAG +
Preference number: 5 (lower is better)
Translates to: VGSRLWGRSACPWVP*PRGLHALWSHSFIQ
Trigger: CTGAATGAATGAGTGACTCCACAAGGCATGCAGGCCGCGAGGGCAGGGCACCCAGGGGCAAGCGCTCCTGCCCCAAAGCCTGGAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS-3UTR CAA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCGCCGCTCGGTCACTaGCTGCAGACGGGCCCCGCT +
Preference number: 5 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRAPLGH*LQTGPA
Trigger: AGCGGGGCCCGTCTGCAGCAAGTGACCGAGCGGCGC...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS GCA 90 bp CTTCCTGGTTCTTGGGCGTCTTGGAGCGGTTCTGGCTGCGCTGTTTaGTCCCCGTGGACCGGATGCTGCGGAAGTGGACCTCCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: LPGSWASWSGSGCAV*SPWTGCCGSGPPWP
Trigger: AGGCCACGGAGGTCCACTTCCGCAGCATCCGGTCCACGGGGAGCAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
ENST00000463939.1
CDS-3UTR CAA 90 bp GAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGGGTGCCGAGTTGTGCTaGCCCTGGAGGTGCGGGCGC +
Preference number: 5 (lower is better)
Translates to: EGKVSQKAVGLLVPGQGEGAELC*PWRCGR
Trigger: GCGCCCGCACCTCCAGGGCAAGCACAACTCGGCACC...CTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS GCA 90 bp CTCTGCCCATCCAGCGTCTCCACCGAGAGCTGCAGGCCCAGGTTGTaGCGCGGATTGACCACCCAGTGGTTGCTGGTGGCTGTGATGTCA +
Preference number: 5 (lower is better)
Translates to: LCPSSVSTESCRPRL*RGLTTQWLLVAVMS
Trigger: TGACATCACAGCCACCAGCAACCACTGGGTGGTCAATCCGCGGCACAACCTGGGCCTGCAGCTCTCGGTGGAGACGCTGGATGGGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
CDS GCA 90 bp CTCTGGTCGCTGCTGCTGTTCTCATCCAGCGTCTCCACCGAGAGCTaGAGGCCCAGGTTGTGCCGCGGATTGACCACCCAGTGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LWSLLLFSSSVSTES*RPRLCRGLTTQWLL
Trigger: CAGCAACCACTGGGTGGTCAATCCGCGGCACAACCTGGGCCTGCAGCTCTCGGTGGAGACGCTGGATGAGAACAGCAGCAGCGACCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395864.7
CDS CCA 90 bp TTGTACAGGTCCAGCATGAACATGGGTGCCGAGTTGTGCTTGCCCTaGAGGTGCGGGCGCGGGCGGTGGGGCAAGCCCAAAATGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LYRSSMNMGAELCLP*RCGRGRWGKPKMER
Trigger: CCTCTCCATTTTGGGCTTGCCCCACCGCCCGCGCCCGCACCTCCAGGGCAAGCACAACTCGGCACCCATGTTCATGCTGGACCTGTACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS CCA 90 bp TGCTGTTCTCTGCCACGTTGGCCATCCGCAGGGCTTCCTGGTTCTTaGGCGTCTTGGAGCGGTTCTGGCTGCGCTGTTTGCTCCCCGTGG +
Preference number: 5 (lower is better)
Translates to: CCSLPRWPSAGLPGS*ASWSGSGCAVCSPW
Trigger: CCACGGGGAGCAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCCTGCGGATGGCCAACGTGGCAGAGAACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
CDS GCA 90 bp AACTTGGGGTTGATGCTCTGCCCATCCAGCGTCTCCACCGAGAGCTaGAGGCCCAGGTTGTGCCGCGGATTGACCACCCAGTGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: NLGLMLCPSSVSTES*RPRLCRGLTTQWLL
Trigger: CAGCAACCACTGGGTGGTCAATCCGCGGCACAACCTGGGCCTGCAGCTCTCGGTGGAGACGCTGGATGGGCAGAGCATCAACCCCAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
CDS CCA 90 bp TCGCTGCTGCTGTTCTCTGCCACGTTGGCCATCCGCAGGGCTTCCTaGTTCTTGGGCGTCTTGGAGCGGTTCTGGCTGCGCTGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: SLLLFSATLAIRRAS*FLGVLERFWLRCLL
Trigger: GAGCAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCCTGCGGATGGCCAACGTGGCAGAGAACAGCAGCAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
CDS CCA 90 bp GGCAGGGACTCGTGTCTGGTTCGTTCTGGTCGATGCCCTCAGGCATaGCATGCAGCAGGTACCTGTGCTGCCCAAGTGCTCCTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: GRDSCLVRSGRCPQA*HAAGTCAAQVLLEH
Trigger: GTGCTCCAGGAGCACTTGGGCAGCACAGGTACCTGCTGCATGCCATGCCTGAGGGCATCGACCAGAACGAACCAGACACGAGTCCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433911.1
CDS-3UTR CAA 90 bp TCCTCCCACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAAAGCTGCAGGCCCAGGTaGTGCCGCGGATTGACCACC +
Preference number: 5 (lower is better)
Translates to: SSHGWVAWLVGAHNYLWKSCRPR*CRGLTT
Trigger: GGTGGTCAATCCGCGGCACAACCTGGGCCTGCAGCT...TTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTGGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp GAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGACCATGAAGGGCTGCTaGTTCTGGGGCCCGTGCCGC +
Preference number: 5 (lower is better)
Translates to: EGKVSQKAVGLLVPGQGETMKGC*FWGPCR
Trigger: GCGGCACGGGCCCCAGAACAAGCAGCCCTTCATGGT...CTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS GCA 90 bp CTGTTCTCATCCAGCGTCTCCACCGAGAGCTGCAGGCCCAGGTTGTaGCGCGGATTGACCACCCAGTGGTTGCTGGTGGCTGTGATGTCA +
Preference number: 5 (lower is better)
Translates to: LFSSSVSTESCRPRL*RGLTTQWLLVAVMS
Trigger: TGACATCACAGCCACCAGCAACCACTGGGTGGTCAATCCGCGGCACAACCTGGGCCTGCAGCTCTCGGTGGAGACGCTGGATGAGAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395864.7
CDS GCA 90 bp GAGCTTCCAGAGGGCAGGGACTCGTGTCTGGTTCGTTCTGGTCGATaGCCTCAGGCATGGCATGCAGCAGGTACCTGTGCTGCCCAAGTG +
Preference number: 5 (lower is better)
Translates to: ELPEGRDSCLVRSGR*PQAWHAAGTCAAQV
Trigger: CACTTGGGCAGCACAGGTACCTGCTGCATGCCATGCCTGAGGGCATCGACCAGAACGAACCAGACACGAGTCCCTGCCCTCTGGAAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433911.1
CDS CCA 90 bp TACATGGAGATGAGGGCTGCCACGTTGGCCATCCGCAGGGCTTCCTaGTTCTTGGGCGTCTTGGAGCGGTTCTGGCTGCGCTGTTTGCTC +
Preference number: 5 (lower is better)
Translates to: YMEMRAATLAIRRAS*FLGVLERFWLRCLL
Trigger: GAGCAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCCTGCGGATGGCCAACGTGGCAGCCCTCATCTCCATGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS-3UTR CAA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCCTCGAGTGCACCTCGTaGTCCAGGCTGAAGTCGGCC +
Preference number: 5 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPLECTS*SRLKSA
Trigger: GGCCGACTTCAGCCTGGACAACGAGGTGCACTCGAG...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCCTGTTCTCTGCCACGTaGGCCATCCGCAGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPLFSAT*AIRRAS
Trigger: GGAAGCCCTGCGGATGGCCAACGTGGCAGAGAACAG...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp AACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCCAGCCACGGGTGCCCTaGCCAGGGCCCAGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: NFRVNFPFAQTPMCPPLAQPRVP*PGPSLG
Trigger: TCCAAGGCTGGGCCCTGGCAAGGGCACCCGTGGCTG...GGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp AGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGCGAGGAAATGGCTATCTaGCAGGCTGGCCAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: RGRSHKRQLVCWFLAKASEEMAI*QAGQRG
Trigger: CCCCCTCTGGCCAGCCTGCAAGATAGCCATTTCCTC...GCTCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp CACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACGAGTCGAGGAAATGGCTATCTaGCAGGCTGGCCAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: HGWVAWLVGAHNYLWKRVEEMAI*QAGQRG
Trigger: CCCCCTCTGGCCAGCCTGCAAGATAGCCATTTCCTC...GACTCGTTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAATCAGGCCCGCCAACTaGGGGTTGATGCTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRIRPAN*GLMLCP
Trigger: TGGGCAGAGCATCAACCCCAAGTTGGCGGGCCTGAT...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGAGGCACCGTTTCCGGGTaGATGAAGTGGACCAGCGTC +
Preference number: 5 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRGTVSG*MKWTSV
Trigger: GACGCTGGTCCACTTCATCAACCCGGAAACGGTGCC...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS GCA 90 bp CTGTCGAGCAGGAAGAGATCCGATTCCCTGCCATGTCCTCTCCTCTaGTGGAACGTGAGCTTCCAGAGGGCAGGGACTCGTGTCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LSSRKRSDSLPCPLL*WNVSFQRAGTRVWF
Trigger: GAACCAGACACGAGTCCCTGCCCTCTGGAAGCTCACGTTCCAGCAGAGGAGAGGACATGGCAGGGAATCGGATCTCTTCCTGCTCGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433911.1
CDS CCA 90 bp CCACGCGCTGCAAAAAGTCTCTCTGTACCTCTGAGTGAAGGTGTCTaGCTTGCCTTGGGCAGCTGTCAGGACAGCCACATCCAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: PRAAKSLSVPLSEGV*LALGSCQDSHIQGA
Trigger: GGCTCCCTGGATGTGGCTGTCCTGACAGCTGCCCAAGGCAAGCCAGACACCTTCACTCAGAGGTACAGAGAGACTTTTTGCAGCGCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS-3UTR CAA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCTGGTTCTTGGGCGTCTaGGAGCGGTTCTGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSWFLGV*ERFWLR
Trigger: GCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCA...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp TCCTCCCACGGCTGGGTGGCCTGGCTGGTAGGCGCTCATAATTACCTCTGGAAACTCCCCGCCCTCCACTaGACACAGCTTCTGTTTACG +
Preference number: 5 (lower is better)
Translates to: SSHGWVAWLVGAHNYLWKLPALH*TQLLFT
Trigger: CGTAAACAGAAGCTGTGTCAAGTGGAGGGCGGGGAG...TTTCCAGAGGTAATTATGAGCGCCTACCAGCCAGGCCACCCAGCCGTGGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS TCA 90 bp AAGGCGAGCAATGGAGGATCCAGAAAAACTTGGCCCCAAAGGGTCTaGATTCTCGGAGGAGCTAGTGGCAGCCACAGGCCCGGACCACCA +
Preference number: 5 (lower is better)
Translates to: KASNGGSRKTWPQRV*ILGGASGSHRPGPP
Trigger: TGGTGGTCCGGGCCTGTGGCTGCCACTAGCTCCTCCGAGAATTCAGACCCTTTGGGGCCAAGTTTTTCTGGATCCTCCATTGCTCGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS CCA 90 bp GGAAGAGATCCGATTCCCTTCACCTGGAACCAAAGTCTGCACCAATaGAGACAGGAGCAAGTCCAGCTCCTGGAAGCCAGGCCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GRDPIPFTWNQSLHQ*RQEQVQLLEARPQL
Trigger: CAGCTGGGGCCTGGCTTCCAGGAGCTGGACTTGCTCCTGTCTCCATTGGTGCAGACTTTGGTTCCAGGTGAAGGGAATCGGATCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460817.5
CDS-3UTR CAA 90 bp AAAACAGAGCCCCGGTGTTTCCAGGAACTGTCTGAGTCAAGATGGAGAAACAGTGGTGCCGAGTTGTGCTaGCCCTGGAGGTGCGGGCGC +
Preference number: 5 (lower is better)
Translates to: KTEPRCFQELSESRWRNSGAELC*PWRCGR
Trigger: GCGCCCGCACCTCCAGGGCAAGCACAACTCGGCACC...ACTGTTTCTCCATCTTGACTCAGACAGTTCCTGGAAACACCGGGGCTCTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCAACATGGGTGCCGAGTaGTGCTTGCCCTGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSNMGAE*CLPWRC
Trigger: GCACCTCCAGGGCAAGCACAACTCGGCACCCATGTT...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp ATAGGGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGAGGTTGTGCCGCGGATaGACCACCCAGTGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: IGRGRSHKRQLVCWFLAKRLCRG*TTQWLL
Trigger: CAGCAACCACTGGGTGGTCAATCCGCGGCACAACCT...CTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp AGATCAACACACCGCCCTCCTCGGAGCAGACATTTGCTCTTTCCCCTCCCACTATGCCAGGGCCCAGCCTaGGAATGCCACTGCAGACAA +
Preference number: 5 (lower is better)
Translates to: RSTHRPPRSRHLLFPLPLCQGPA*ECHCRQ
Trigger: TTGTCTGCAGTGGCATTCCAAGGCTGGGCCCTGGCA...TAGTGGGAGGGGAAAGAGCAAATGTCTGCTCCGAGGAGGGCGGTGTGTTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS TCA 90 bp ATTCAGCCATTGCTAGGGGCTGCTTCCTGGTGTGCAGGCATGAGATaGGTCCCAGGTGTAAGACAGCAAAGCCCTGCCACTCAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: IQPLLGAASWCAGMR*VPGVRQQSPATQGL
Trigger: AAGCCCCTGAGTGGCAGGGCTTTGCTGTCTTACACCTGGGACTCATCTCATGCCTGCACACCAGGAAGCAGCCCCTAGCAATGGCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS-3UTR CAA 90 bp AACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCGGCACCGTTTCCGGGTaGATGAAGTGGACCAGCGTC +
Preference number: 5 (lower is better)
Translates to: NFRVNFPFAQTPMCPPLAGTVSG*MKWTSV
Trigger: GACGCTGGTCCACTTCATCAACCCGGAAACGGTGCC...GGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS TCA 90 bp GATCCGATTCCCTGCCCAAGTGCTCCTGGAGCACCTGATAAACGCTaGTCCGGAACGTCTCATTGTCGAAGCGTTCCCGGATGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: DPIPCPSAPGAPDKR*SGTSHCRSVPGCSP
Trigger: AGGACTACATCCGGGAACGCTTCGACAATGAGACGTTCCGGATCAGCGTTTATCAGGTGCTCCAGGAGCACTTGGGCAGGGAATCGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
ENST00000530870.1
CDS TCA 90 bp AGGTACCTGTGCTGCCCAAGTGCTCCTGGAGCACCTGATAAACGCTaGTCCGGAACGTCTCATTGTCGAAGCGTTCCCGGATGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: RYLCCPSAPGAPDKR*SGTSHCRSVPGCSP
Trigger: AGGACTACATCCGGGAACGCTTCGACAATGAGACGTTCCGGATCAGCGTTTATCAGGTGCTCCAGGAGCACTTGGGCAGCACAGGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433911.1
CDS-3UTR CAA 90 bp AATTTCACATGGATTTACTACCACTGGGGCGAGGTGAAAAGCCAATCCCAAATGGGCGCACCGCAGGGCTaGGAAAGCAGCCCCGGCGAA +
Preference number: 5 (lower is better)
Translates to: NFTWIYYHWGEVKSQSQMGAPQG*ESSPGE
Trigger: TTCGCCGGGGCTGCTTTCCAAGCCCTGCGGTGCGCC...CATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCATGTGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGCGATCATGTTCCACGAGGTaGACGAAGCTCATGACCATG +
Preference number: 5 (lower is better)
Translates to: GGEGLTKGSWSAGSWPRRSCSTR*TKLMTM
Trigger: CATGGTCATGAGCTTCGTCAACCTCGTGGAACATGA...TCGCCTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp ATAGGGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGTTGACCACCCAGTGGTaGCTGGTGGCTGTGATGTCA +
Preference number: 5 (lower is better)
Translates to: IGRGRSHKRQLVCWFLAKLTTQW*LVAVMS
Trigger: TGACATCACAGCCACCAGCAACCACTGGGTGGTCAA...CTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp CTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACTTGGTTACCCGCCAACTTGGGGTaGATGCTCTGCCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: LTPRATSEMPPPNRDTWLPANLG*MLCPSS
Trigger: GCTGGATGGGCAGAGCATCAACCCCAAGTTGGCGGG...TAACCAAGTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp CTCCACTTGACACAGCTTCTGTTTACGCATCAGGATAAACCGAGAAATGGGGATGGCGCACAGCAGGGCTaGGGCACCGTTTCCGGGTTG +
Preference number: 5 (lower is better)
Translates to: LHLTQLLFTHQDKPRNGDGAQQG*GTVSGL
Trigger: CAACCCGGAAACGGTGCCCAAGCCCTGCTGTGCGCC...ATCCCCATTTCTCGGTTTATCCTGATGCGTAAACAGAAGCTGTGTCAAGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp AGGCAGGCTTACACCAAGAGCCACGTCAGAAATGCCACCTCCAAATCGGGACACCCTCGGAGCAGACATTaGCTCTTTCCCCTCCCACTA +
Preference number: 5 (lower is better)
Translates to: RQAYTKSHVRNATSKSGHPRSRH*LFPLPL
Trigger: TAGTGGGAGGGGAAAGAGCAAATGTCTGCTCCGAGG...GTGTCCCGATTTGGAGGTGGCATTTCTGACGTGGCTCTTGGTGTAAGCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GCCACTGAAAAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCGCGCCGCTCGGTCACTaGCTGCAGACGGGCCCCGCT +
Preference number: 5 (lower is better)
Translates to: ATEKLIKSHMLLMFPNTLAPLGH*LQTGPA
Trigger: AGCGGGGCCCGTCTGCAGCAAGTGACCGAGCGGCGC...GAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTTTTCAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp TTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCAACATGGGTGCCGAGTaGTGCTTGCCCTGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LQELPGQFSFRTDTNVPTNMGAE*CLPWRC
Trigger: GCACCTCCAGGGCAAGCACAACTCGGCACCCATGTT...GGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCTCACACCTTTAAAGTaGGGGATAGGGAGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSLTPLK*GIGRGR
Trigger: CCTTCCCCTCCCTATCCCCAACTTTAAAGGTGTGAG...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS GCA 90 bp GCATGCCTTGTGGAGTCACTCATTCATTCAGCCATTGCTAGGGGCTaGTTCCTGGTGTGCAGGCATGAGATGAGTCCCAGGTGTAAGACA +
Preference number: 5 (lower is better)
Translates to: ACLVESLIHSAIARG*FLVCRHEMSPRCKT
Trigger: TGTCTTACACCTGGGACTCATCTCATGCCTGCACACCAGGAAGCAGCCCCTAGCAATGGCTGAATGAATGAGTGACTCCACAAGGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS-3UTR CAA 90 bp ATAGGGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGTCATGTTCCACGAGGTaGACGAAGCTCATGACCATG +
Preference number: 5 (lower is better)
Translates to: IGRGRSHKRQLVCWFLAKSCSTR*TKLMTM
Trigger: CATGGTCATGAGCTTCGTCAACCTCGTGGAACATGA...CTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp AGATCAACACACCGCCCTCCTCGGAGCAGACATTTGCTCTTTCCCCTCCCACTAGGGTGGAAGAATTCCTaGTCATGTTCCACGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RSTHRPPRSRHLLFPLPLGWKNS*SCSTRL
Trigger: CAACCTCGTGGAACATGACAAGGAATTCTTCCACCC...TAGTGGGAGGGGAAAGAGCAAATGTCTGCTCCGAGGAGGGCGGTGTGTTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp ATAGGGAGGGGAAGGTCTCACAAAAGGCAGTTGGTCTGCTGGTTCCTGGCCAAGGGGTGGAAGAATTCCTaGTCATGTTCCACGAGGTTG +
Preference number: 5 (lower is better)
Translates to: IGRGRSHKRQLVCWFLAKGWKNS*SCSTRL
Trigger: CAACCTCGTGGAACATGACAAGGAATTCTTCCACCC...CTTGGCCAGGAACCAGCAGACCAACTGCCTTTTGTGAGACCTTCCCCTCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp CTGTGCCCGGCCCATTGGTGCTTCTTAACAACAGGGTTGAGTTGCAAGTTCCATTTGACCACCCAGTGGTaGCTGGTGGCTGTGATGTCA +
Preference number: 5 (lower is better)
Translates to: LCPAHWCFLTTGLSCKFHLTTQW*LVAVMS
Trigger: TGACATCACAGCCACCAGCAACCACTGGGTGGTCAA...ATGGAACTTGCAACTCAACCCTGTTGTTAAGAAGCACCAATGGGCCGGGCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GGATCTTGTTCATTGGATGCTGCCACTGAAAAACTGATCAAAAGCCATATGCTGGGCGCACAGCAGGGCTaGGGCACCGTTTCCGGGTTG +
Preference number: 5 (lower is better)
Translates to: GSCSLDAATEKLIKSHMLGAQQG*GTVSGL
Trigger: CAACCCGGAAACGGTGCCCAAGCCCTGCTGTGCGCC...CAGCATATGGCTTTTGATCAGTTTTTCAGTGGCAGCATCCAATGAACAAGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp GTCCACTGGGGCGATGTGCAGTGCTCCTGCTCACCCCACTCCCGTGGAGAACTAAAACGTCTCCTTTTATaGCAAGGTCAAACCCTTTTC +
Preference number: 5 (lower is better)
Translates to: VHWGDVQCSCSPHSRGELKRLLL*QGQTLF
Trigger: GAAAAGGGTTTGACCTTGCAATAAAAGGAGACGTTT...TAGTTCTCCACGGGAGTGGGGTGAGCAGGAGCACTGCACATCGCCCCAGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp ATTGTGACATTTATTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACGGCGCTCTCCCAGCCTaGTGCGCCCTGGATCGCACA +
Preference number: 5 (lower is better)
Translates to: IVTFITGTSGSIFLSHRHGALPA*CALDRT
Trigger: TGTGCGATCCAGGGCGCACAAGGCTGGGAGAGCGCC...GTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAATAAATGTCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCAATCCCCTTCTGGGATCTaGGAAAGATCAAACCGGAAC +
Preference number: 5 (lower is better)
Translates to: AHNYLWKRVRAWLRLPSQSPSGI*ERSNRN
Trigger: GTTCCGGTTTGATCTTTCCAAGATCCCAGAAGGGGA...TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp ATTGTGACATTTATTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACAGCTGCAGGCCCAGGTaGTGCCGCGGATTGACCACC +
Preference number: 5 (lower is better)
Translates to: IVTFITGTSGSIFLSHRHSCRPR*CRGLTT
Trigger: GGTGGTCAATCCGCGGCACAACCTGGGCCTGCAGCT...GTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAATAAATGTCACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp AATTTCACATGGATTTACTACCACTGGGGCGAGGTGAAAAGCCAATCCCAAATGAGGGCTTCCTGGTTCTaGGGCGTCTTGGAGCGGTTC +
Preference number: 5 (lower is better)
Translates to: NFTWIYYHWGEVKSQSQMRASWF*GVLERF
Trigger: GAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCCT...CATTTGGGATTGGCTTTTCACCTCGCCCCAGTGGTAGTAAATCCATGTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GGCGCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCAACAACAGGGTTGAGTaGCAAGTTCCATCCTACTTG +
Preference number: 5 (lower is better)
Translates to: GAHNYLWKRVRAWLRLPSNNRVE*QVPSYL
Trigger: CAAGTAGGATGGAACTTGCAACTCAACCCTGTTGTT...GCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS CCA 90 bp TGGGATCTTGGAAAGATCAAACCGGAACTCTCGATGGTGGTAGCGTaGGTGGAAGAATTCCTTGTCATGTTCCACGAGGTTGACGAAGCT +
Preference number: 5 (lower is better)
Translates to: WDLGKIKPELSMVVA*VEEFLVMFHEVDEA
Trigger: AGCTTCGTCAACCTCGTGGAACATGACAAGGAATTCTTCCACCCACGCTACCACCATCGAGAGTTCCGGTTTGATCTTTCCAAGATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000433911.1
ENST00000450594.6
CDS-3UTR CAA 90 bp CAGAGGCTGGTTGGGTCAGAAAACTCACACCAAGAGGGATCACACAAAAAGCCCAGGATCCAGAAAAACTaGGCCCCAAAGGGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: QRLVGSENSHQEGSHKKPRIQKN*APKGLN
Trigger: ATTCAGACCCTTTGGGGCCAAGTTTTTCTGGATCCT...GGGCTTTTTGTGTGATCCCTCTTGGTGTGAGTTTTCTGACCCAACCAGCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCAAAGGATCCAGAAAAACTaGGCCCCAAAGGGTCTGAAT +
Preference number: 5 (lower is better)
Translates to: AHNYLWKRVRAWLRLPSQRIQKN*APKGLN
Trigger: ATTCAGACCCTTTGGGGCCAAGTTTTTCTGGATCCT...TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp CGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCCCTTGCCACGCCCACAGCTGTGAGTACATaGGTCCAACCATTAATAAAT +
Preference number: 5 (lower is better)
Translates to: RVNFPFAQTPMCPPLATPTAVST*VQPLIN
Trigger: ATTTATTAATGGTTGGACCAATGTACTCACAGCTGT...GGGCGTGGCAAGGGGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS CCA 90 bp TGGGATCTTGGAAAGATCAAACCGGAACTCTCGATGGTGGTAGCGTaGGTGGAAGAATTCCTTGTCATGTTCCACTGTTTCTCCACTGTC +
Preference number: 5 (lower is better)
Translates to: WDLGKIKPELSMVVA*VEEFLVMFHCFSTV
Trigger: GACAGTGGAGAAACAGTGGAACATGACAAGGAATTCTTCCACCCACGCTACCACCATCGAGAGTTCCGGTTTGATCTTTCCAAGATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530870.1
CDS-3UTR CAA 90 bp GTTTCATTTCTGCCACGGCAAATCCAGCTGAACAACAGAACATATTTTTCCTCCATCCGGAACGTCTCATaGTCGAAGCGTTCCCGGATG +
Preference number: 5 (lower is better)
Translates to: VSFLPRQIQLNNRTYFSSIRNVS*SKRSRM
Trigger: CATCCGGGAACGCTTCGACAATGAGACGTTCCGGAT...GGAGGAAAAATATGTTCTGTTGTTCAGCTGGATTTGCCGTGGCAGAAATGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp TTTACAGGTTTAAATGTACAAATGATGCTAACCAGAGGCTGGTTGGGTCAGAAAAGGTTGTGCCGCGGATaGACCACCCAGTGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: FTGLNVQMMLTRGWLGQKRLCRG*TTQWLL
Trigger: CAGCAACCACTGGGTGGTCAATCCGCGGCACAACCT...TTTCTGACCCAACCAGCCTCTGGTTAGCATCATTTGTACATTTAAACCTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GGTGAAAAGCCAATCCCAAATGTCTGCGGGTATTTCACACACCTAGTTTCATTTACTGTGCCCGGCCCATaGGTGCTTCTTAACAACAGG +
Preference number: 5 (lower is better)
Translates to: GEKPIPNVCGYFTHLVSFTVPGP*VLLNNR
Trigger: CCTGTTGTTAAGAAGCACCAATGGGCCGGGCACAGT...AAATGAAACTAGGTGTGTGAAATACCCGCAGACATTTGGGATTGGCTTTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GCTCATAATTACCTCTGGAAACGAGTCCGTGCATGGCTGAGACTTCCCAGCCAACAACAAGGCTTCTATTaGCAATGTAAGTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: AHNYLWKRVRAWLRLPSQQQGFY*QCKSST
Trigger: TGTGCTGGACTTACATTGCAAATAGAAGCCTTGTTG...TTGGCTGGGAAGTCTCAGCCATGCACGGACTCGTTTCCAGAGGTAATTATGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GCCACTGAAAAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCATCCGGAACGTCTCATaGTCGAAGCGTTCCCGGATG +
Preference number: 5 (lower is better)
Translates to: ATEKLIKSHMLLMFPNTLIRNVS*SKRSRM
Trigger: CATCCGGGAACGCTTCGACAATGAGACGTTCCGGAT...GAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTTTTCAGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp GGTGAAAAGCCAATCCCAAATGTCTGCGGGTATTTCACACACCTAGTTTCATTTCTCACACCTTTAAAGTaGGGGATAGGGAGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GEKPIPNVCGYFTHLVSFLTPLK*GIGRGR
Trigger: CCTTCCCCTCCCTATCCCCAACTTTAAAGGTGTGAG...AAATGAAACTAGGTGTGTGAAATACCCGCAGACATTTGGGATTGGCTTTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp TTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACCAATGTGCCCACCTTCTTAACAACAGGGTaGAGTTGCAAGTTCCATCCT +
Preference number: 5 (lower is better)
Translates to: LQELPGQFSFRTDTNVPTFLTTG*SCKFHP
Trigger: AGGATGGAACTTGCAACTCAACCCTGTTGTTAAGAA...GGTGGGCACATTGGTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GGTGAAAAGCCAATCCCAAATGTCTGCGGGTATTTCACACACCTAGTTTCATTTCTAACCAGAGGCTGGTaGGGTCAGAAAACTCACACC +
Preference number: 5 (lower is better)
Translates to: GEKPIPNVCGYFTHLVSFLTRGW*GQKTHT
Trigger: GGTGTGAGTTTTCTGACCCAACCAGCCTCTGGTTAG...AAATGAAACTAGGTGTGTGAAATACCCGCAGACATTTGGGATTGGCTTTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GGTGAAAAGCCAATCCCAAATGTCTGCGGGTATTTCACACACCTAGTTTCATTTTCCAAATCGGGACACTaGGTTAGGATGTCACCCTCA +
Preference number: 5 (lower is better)
Translates to: GEKPIPNVCGYFTHLVSFSKSGH*VRMSPS
Trigger: TGAGGGTGACATCCTAACCAAGTGTCCCGATTTGGA...AAATGAAACTAGGTGTGTGAAATACCCGCAGACATTTGGGATTGGCTTTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GCCACTGAAAAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCTCCCCTTCTGGGATCTaGGAAAGATCAAACCGGAAC +
Preference number: 5 (lower is better)
Translates to: ATEKLIKSHMLLMFPNTLSPSGI*ERSNRN
Trigger: GTTCCGGTTTGATCTTTCCAAGATCCCAGAAGGGGA...GAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTTTTCAGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp GGTGAAAAGCCAATCCCAAATGTCTGCGGGTATTTCACACACCTAGTTTCATTTGTAGGATCTTGTTCATaGGATGCTGCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: GEKPIPNVCGYFTHLVSFVGSCS*DAATEK
Trigger: TTTTTCAGTGGCAGCATCCAATGAACAAGATCCTAC...AAATGAAACTAGGTGTGTGAAATACCCGCAGACATTTGGGATTGGCTTTTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp GTTTCATTTCTGCCACGGCAAATCCAGCTGAACAACAGAACATATTTTTCCTCCAAGGAGCAAATTTGTTaGCAGAGACTTCTGATCAGG +
Preference number: 5 (lower is better)
Translates to: VSFLPRQIQLNNRTYFSSKEQIC*QRLLIR
Trigger: CCTGATCAGAAGTCTCTGCAAACAAATTTGCTCCTT...GGAGGAAAAATATGTTCTGTTGTTCAGCTGGATTTGCCGTGGCAGAAATGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS-3UTR CAA 90 bp AAACTGATCAAAAGCCATATGCTGCTCATGTTTCCTAATACTCTCACACCTTTAGTAGGATCTTGTTCATaGGATGCTGCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: KLIKSHMLLMFPNTLTPLVGSCS*DAATEK
Trigger: TTTTTCAGTGGCAGCATCCAATGAACAAGATCCTAC...TAAAGGTGTGAGAGTATTAGGAAACATGAGCAGCATATGGCTTTTGATCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395863.8
ENST00000395864.7
CDS-3UTR CAA 90 bp ATTGTGACATTTATTACAGGAACTTCCGGGTCAATTTTCCTTTCGCACAGACACATTCAAGGAGCAAATTaGTTTGCAGAGACTTCTGAT +
Preference number: 5 (lower is better)
Translates to: IVTFITGTSGSIFLSHRHIQGAN*FAETSD
Trigger: ATCAGAAGTCTCTGCAAACAAATTTGCTCCTTGAAT...GTGTCTGTGCGAAAGGAAAATTGACCCGGAAGTTCCTGTAATAAATGTCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395863.8
CDS GCA 72 bp GGGGCAGGCGGCCGTCCGCGCCGCTCGGTCACTTGCTaGAGACGGGCCCCGCTGCGCCCGCGCCAGACATGG +
Preference number: 6 (lower is better)
Translates to: GAGGRPRRSVTC*RRAPLRPRQTW
Trigger: CCATGTCTGGCGCGGGCGCAGCGGGGCCCGTCTGCAGCAAGTGACCGAGCGGCGCGGACGGCCGCCTGCCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS GCA 72 bp GAGGGGGCAGGCGGCCGTCCGCGCCGCTCGGTCACTTaGTGCAGACGGGCCCCGCTGCGCCCGCGCCAGACA +
Preference number: 6 (lower is better)
Translates to: EGAGGRPRRSVT*CRRAPLRPRQT
Trigger: TGTCTGGCGCGGGCGCAGCGGGGCCCGTCTGCAGCAAGTGACCGAGCGGCGCGGACGGCCGCCTGCCCCCTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS GCA 72 bp AAGCTGTGCGGCGCCGCAGCTCGCAGTGAGCGCACGTaGATCGCGCCGGCTCTACGCGCTACCCGGGCTCCG +
Preference number: 6 (lower is better)
Translates to: KLCGAAARSERT*IAPALRATRAP
Trigger: CGGAGCCCGGGTAGCGCGTAGAGCCGGCGCGATGCACGTGCGCTCACTGCGAGCTGCGGCGCCGCACAGCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS GCA 72 bp GAAGTCGGCCAGGGCGGAGCGCAGCAGGAACAGGGGTaGCCAGAGCGCCACGAAGCTGTGCGGCGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: EVGQGGAQQEQG*PERHEAVRRRS
Trigger: GCTGCGGCGCCGCACAGCTTCGTGGCGCTCTGGGCACCCCTGTTCCTGCTGCGCTCCGCCCTGGCCGACTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS TCA 72 bp GAGCGCCACGAAGCTGTGCGGCGCCGCAGCTCGCAGTaGGCGCACGTGCATCGCGCCGGCTCTACGCGCTAC +
Preference number: 6 (lower is better)
Translates to: ERHEAVRRRSSQ*AHVHRAGSTRY
Trigger: GTAGCGCGTAGAGCCGGCGCGATGCACGTGCGCTCACTGCGAGCTGCGGCGCCGCACAGCTTCGTGGCGCTC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS GCA 72 bp CGGTGGGGCAAGCCCAAAATGGAGAGGATCTCGCGCTaGATCTCCCGCCGCTCCTGGCTGCGGAGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: RWGKPKMERISR*ISRRSWLRRRR
Trigger: CCGGCGCCTCCGCAGCCAGGAGCGGCGGGAGATGCAGCGCGAGATCCTCTCCATTTTGGGCTTGCCCCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS GCA 72 bp AGCAGGAACAGGGGTGCCCAGAGCGCCACGAAGCTGTaGGGCGCCGCAGCTCGCAGTGAGCGCACGTGCATC +
Preference number: 6 (lower is better)
Translates to: SRNRGAQSATKL*GAAARSERTCI
Trigger: GATGCACGTGCGCTCACTGCGAGCTGCGGCGCCGCACAGCTTCGTGGCGCTCTGGGCACCCCTGTTCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS CAA 90 bp TCCTGGCTGCGGAGGCGCCGGTGGATGAAGCTCGAGTGCACCTCGTaGTCCAGGCTGAAGTCGGCCAGGGCGGAGCGCAGCAGGAACAGG +
Preference number: 6 (lower is better)
Translates to: SWLRRRRWMKLECTS*SRLKSARAERSRNR
Trigger: CCTGTTCCTGCTGCGCTCCGCCCTGGCCGACTTCAGCCTGGACAACGAGGTGCACTCGAGCTTCATCCACCGGCGCCTCCGCAGCCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS GCA 72 bp TCCTGGCTGCGGAGGCGCCGGTGGATGAAGCTCGAGTaGACCTCGTTGTCCAGGCTGAAGTCGGCCAGGGCG +
Preference number: 6 (lower is better)
Translates to: SWLRRRRWMKLE*TSLSRLKSARA
Trigger: CGCCCTGGCCGACTTCAGCCTGGACAACGAGGTGCACTCGAGCTTCATCCACCGGCGCCTCCGCAGCCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
CDS GCA 72 bp AGGCTTTGGGGCAGGAGCGCTTGCCCCTGGGTGCCCTaGCCTCGCGGCCTGCATGCCTTGTGGAGTCACTCA +
Preference number: 6 (lower is better)
Translates to: RLWGRSACPWVP*PRGLHALWSHS
Trigger: TGAGTGACTCCACAAGGCATGCAGGCCGCGAGGGCAGGGCACCCAGGGGCAAGCGCTCCTGCCCCAAAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS CAA 72 bp GGCCCGTGCCGCCCAATCAGGCCCGCCAACTTGGGGTaGATGCTCTGCCCATCCAGCGTCTCCACCGAGAGC +
Preference number: 6 (lower is better)
Translates to: GPCRPIRPANLG*MLCPSSVSTES
Trigger: GCTCTCGGTGGAGACGCTGGATGGGCAGAGCATCAACCCCAAGTTGGCGGGCCTGATTGGGCGGCACGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
CDS CAA 90 bp GCTTCCTGGTTCTTGGGCGTCTTGGAGCGGTTCTGGCTGCGCTGTTaGCTCCCCGTGGACCGGATGCTGCGGAAGTGGACCTCCGTGGCC +
Preference number: 6 (lower is better)
Translates to: ASWFLGVLERFWLRC*LPVDRMLRKWTSVA
Trigger: GGCCACGGAGGTCCACTTCCGCAGCATCCGGTCCACGGGGAGCAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
ENST00000463939.1
CDS GCA 72 bp TCCAGCGTCTCCACCGAGAGCTGCAGGCCCAGGTTGTaGCGCGGATTGACCACCCAGTGGTTGCTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: SSVSTESCRPRL*RGLTTQWLLVA
Trigger: AGCCACCAGCAACCACTGGGTGGTCAATCCGCGGCACAACCTGGGCCTGCAGCTCTCGGTGGAGACGCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
ENST00000524700.5
ENST00000530870.1
CDS GCA 72 bp GAGCCGGGCGAGAGGGCGAGTCTCGGCTCTGCCACTTaGTGGGGCGCGTCACTCCTCTTCTGTGAAATGCAG +
Preference number: 6 (lower is better)
Translates to: EPGERASLGSAT*WGASLLFCEMQ
Trigger: CTGCATTTCACAGAAGAGGAGTGACGCGCCCCAGCAAGTGGCAGAGCCGAGACTCGCCCTCTCGCCCGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530870.1
CDS CCA 72 bp TCTTGGAGCGGTTCTGGCTGCGCTGTTTGCTCCCCGTaGACCGGATGCTGCGGAAGTGGACCTCCGTGGCCT +
Preference number: 6 (lower is better)
Translates to: SWSGSGCAVCSP*TGCCGSGPPWP
Trigger: AGGCCACGGAGGTCCACTTCCGCAGCATCCGGTCCACGGGGAGCAAACAGCGCAGCCAGAACCGCTCCAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
ENST00000463939.1
CDS CCA 72 bp ATGAGGGCTGCCACGTTGGCCATCCGCAGGGCTTCCTaGTTCTTGGGCGTCTTGGAGCGGTTCTGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: MRAATLAIRRAS*FLGVLERFWLR
Trigger: GCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCCTGCGGATGGCCAACGTGGCAGCCCTCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS CCA 72 bp CCGGGCGAGAGGGCGAGTCTCGGCTCTGCCACTTGCTaGGGCGCGTCACTCCTCTTCTGTGAAATGCAGGTG +
Preference number: 6 (lower is better)
Translates to: PGERASLGSATC*GASLLFCEMQV
Trigger: CACCTGCATTTCACAGAAGAGGAGTGACGCGCCCCAGCAAGTGGCAGAGCCGAGACTCGCCCTCTCGCCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530870.1
CDS CAA 72 bp CCATCCAGCGTCTCCACCGAGAGCTGCAGGCCCAGGTaGTGCCGCGGATTGACCACCCAGTGGTTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: PSSVSTESCRPR*CRGLTTQWLLV
Trigger: CACCAGCAACCACTGGGTGGTCAATCCGCGGCACAACCTGGGCCTGCAGCTCTCGGTGGAGACGCTGGATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
ENST00000524700.5
ENST00000530870.1
CDS CAA 90 bp GAGATGAGGGCTGCCACGTTGGCCATCCGCAGGGCTTCCTGGTTCTaGGGCGTCTTGGAGCGGTTCTGGCTGCGCTGTTTGCTCCCCGTG +
Preference number: 6 (lower is better)
Translates to: EMRAATLAIRRASWF*GVLERFWLRCLLPV
Trigger: CACGGGGAGCAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCCTGCGGATGGCCAACGTGGCAGCCCTCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS GCA 72 bp TCTTGGGCGTCTTGGAGCGGTTCTGGCTGCGCTGTTTaGTCCCCGTGGACCGGATGCTGCGGAAGTGGACCT +
Preference number: 6 (lower is better)
Translates to: SWASWSGSGCAV*SPWTGCCGSGP
Trigger: AGGTCCACTTCCGCAGCATCCGGTCCACGGGGAGCAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
ENST00000463939.1
CDS GCA 72 bp CTTCCTGGTTCTTGGGCGTCTTGGAGCGGTTCTGGCTaGGCTGTTTGCTCCCCGTGGACCGGATGCTGCGGA +
Preference number: 6 (lower is better)
Translates to: LPGSWASWSGSG*AVCSPWTGCCG
Trigger: TCCGCAGCATCCGGTCCACGGGGAGCAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
ENST00000463939.1
CDS GCA 72 bp CTGCTGCTGTTCTCATCCAGCGTCTCCACCGAGAGCTaGAGGCCCAGGTTGTGCCGCGGATTGACCACCCAG +
Preference number: 6 (lower is better)
Translates to: LLLFSSSVSTES*RPRLCRGLTTQ
Trigger: CTGGGTGGTCAATCCGCGGCACAACCTGGGCCTGCAGCTCTCGGTGGAGACGCTGGATGAGAACAGCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395864.7
CDS GCA 72 bp GGAGCGCTTGCCCCTGGGTGCCCTGCCCTCGCGGCCTaGATGCCTTGTGGAGTCACTCATTCATTCAGCCAT +
Preference number: 6 (lower is better)
Translates to: GALAPGCPALAA*MPCGVTHSFSH
Trigger: ATGGCTGAATGAATGAGTGACTCCACAAGGCATGCAGGCCGCGAGGGCAGGGCACCCAGGGGCAAGCGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS CCA 72 bp AGGGCTTCCTGGTTCTTGGGCGTCTTGGAGCGGTTCTaGCTGCGCTGTTTGCTCCCCGTGGACCGGATGCTG +
Preference number: 6 (lower is better)
Translates to: RASWFLGVLERF*LRCLLPVDRML
Trigger: CAGCATCCGGTCCACGGGGAGCAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
ENST00000463939.1
CDS CCA 72 bp CTGCCACGTTGGCCATCCGCAGGGCTTCCTGGTTCTTaGGCGTCTTGGAGCGGTTCTGGCTGCGCTGTTTGC +
Preference number: 6 (lower is better)
Translates to: LPRWPSAGLPGS*ASWSGSGCAVC
Trigger: GCAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCCTGCGGATGGCCAACGTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
ENST00000463939.1
CDS CCA 72 bp CTGTTCTCTGCCACGTTGGCCATCCGCAGGGCTTCCTaGTTCTTGGGCGTCTTGGAGCGGTTCTGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: LFSATLAIRRAS*FLGVLERFWLR
Trigger: GCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCCTGCGGATGGCCAACGTGGCAGAGAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
CDS CAA 72 bp TCATCCAGCGTCTCCACCGAGAGCTGCAGGCCCAGGTaGTGCCGCGGATTGACCACCCAGTGGTTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: SSSVSTESCRPR*CRGLTTQWLLV
Trigger: CACCAGCAACCACTGGGTGGTCAATCCGCGGCACAACCTGGGCCTGCAGCTCTCGGTGGAGACGCTGGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395864.7
CDS CAA 72 bp GCTGCCACGTTGGCCATCCGCAGGGCTTCCTGGTTCTaGGGCGTCTTGGAGCGGTTCTGGCTGCGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: AATLAIRRASWF*GVLERFWLRCL
Trigger: CAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCCTGCGGATGGCCAACGTGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS CAA 90 bp ATGCTCTGCCCATCCAGCGTCTCCACCGAGAGCTGCAGGCCCAGGTaGTGCCGCGGATTGACCACCCAGTGGTTGCTGGTGGCTGTGATG +
Preference number: 6 (lower is better)
Translates to: MLCPSSVSTESCRPR*CRGLTTQWLLVAVM
Trigger: CATCACAGCCACCAGCAACCACTGGGTGGTCAATCCGCGGCACAACCTGGGCCTGCAGCTCTCGGTGGAGACGCTGGATGGGCAGAGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
CDS CAA 90 bp CTGCTGTTCTCTGCCACGTTGGCCATCCGCAGGGCTTCCTGGTTCTaGGGCGTCTTGGAGCGGTTCTGGCTGCGCTGTTTGCTCCCCGTG +
Preference number: 6 (lower is better)
Translates to: LLFSATLAIRRASWF*GVLERFWLRCLLPV
Trigger: CACGGGGAGCAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCCTGCGGATGGCCAACGTGGCAGAGAACAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
CDS CAA 90 bp AGGAGCGCTTGCCCCTGGGTGCCCTGCCCTCGCGGCCTGCATGCCTaGTGGAGTCACTCATTCATTCAGCCATTGCTAGGGGCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: RSACPWVPCPRGLHA*WSHSFIQPLLGAAS
Trigger: GGAAGCAGCCCCTAGCAATGGCTGAATGAATGAGTGACTCCACAAGGCATGCAGGCCGCGAGGGCAGGGCACCCAGGGGCAAGCGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS CAA 90 bp CTGCTGTTCTCATCCAGCGTCTCCACCGAGAGCTGCAGGCCCAGGTaGTGCCGCGGATTGACCACCCAGTGGTTGCTGGTGGCTGTGATG +
Preference number: 6 (lower is better)
Translates to: LLFSSSVSTESCRPR*CRGLTTQWLLVAVM
Trigger: CATCACAGCCACCAGCAACCACTGGGTGGTCAATCCGCGGCACAACCTGGGCCTGCAGCTCTCGGTGGAGACGCTGGATGAGAACAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395864.7
CDS GCA 72 bp ACAGCTCGTGCTTCTTACAGGCCTGCCTCTGGTCGCTaGTGCTGTTCTCTGCCACGTTGGCCATCCGCAGGG +
Preference number: 6 (lower is better)
Translates to: TARASYRPASGR*CCSLPRWPSAG
Trigger: CCCTGCGGATGGCCAACGTGGCAGAGAACAGCAGCAGCGACCAGAGGCAGGCCTGTAAGAAGCACGAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
CDS GCA 72 bp CGCTTGCCCCTGGGTGCCCTGCCCTCGCGGCCTGCATaGCTTGTGGAGTCACTCATTCATTCAGCCATTGCT +
Preference number: 6 (lower is better)
Translates to: RLPLGALPSRPA*LVESLIHSAIA
Trigger: AGCAATGGCTGAATGAATGAGTGACTCCACAAGGCATGCAGGCCGCGAGGGCAGGGCACCCAGGGGCAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS CAA 72 bp TCTGCCACGTTGGCCATCCGCAGGGCTTCCTGGTTCTaGGGCGTCTTGGAGCGGTTCTGGCTGCGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: SATLAIRRASWF*GVLERFWLRCL
Trigger: CAAACAGCGCAGCCAGAACCGCTCCAAGACGCCCAAGAACCAGGAAGCCCTGCGGATGGCCAACGTGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000433911.1
ENST00000450594.6
ENST00000460817.5
CDS CAA 72 bp TGCCCCTGGGTGCCCTGCCCTCGCGGCCTGCATGCCTaGTGGAGTCACTCATTCATTCAGCCATTGCTAGGG +
Preference number: 6 (lower is better)
Translates to: CPWVPCPRGLHA*WSHSFIQPLLG
Trigger: CCCTAGCAATGGCTGAATGAATGAGTGACTCCACAAGGCATGCAGGCCGCGAGGGCAGGGCACCCAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS GCA 72 bp GAGGGCAGGGACTCGTGTCTGGTTCGTTCTGGTCGATaGCCTCAGGCATGGCATGCAGCAGGTACCTGTGCT +
Preference number: 6 (lower is better)
Translates to: EGRDSCLVRSGR*PQAWHAAGTCA
Trigger: AGCACAGGTACCTGCTGCATGCCATGCCTGAGGGCATCGACCAGAACGAACCAGACACGAGTCCCTGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433911.1
CDS CCA 72 bp GCTTCCAGAGGGCAGGGACTCGTGTCTGGTTCGTTCTaGTCGATGCCCTCAGGCATGGCATGCAGCAGGTAC +
Preference number: 6 (lower is better)
Translates to: ASRGQGLVSGSF*SMPSGMACSRY
Trigger: GTACCTGCTGCATGCCATGCCTGAGGGCATCGACCAGAACGAACCAGACACGAGTCCCTGCCCTCTGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433911.1
CDS GCA 72 bp ACAGCTCGTGCTTCTTACAGGCCTGCCTCTGGTCGCTaGTGCTGTTCTCATCCAGCGTCTCCACCGAGAGCT +
Preference number: 6 (lower is better)
Translates to: TARASYRPASGR*CCSHPASPPRA
Trigger: AGCTCTCGGTGGAGACGCTGGATGAGAACAGCAGCAGCGACCAGAGGCAGGCCTGTAAGAAGCACGAGCTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395864.7
CDS GCA 72 bp TCTGGTTCGTTCTGGTCGATGCCCTCAGGCATGGCATaGAGCAGGTACCTGTGCTGCCCAAGTGCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: SGSFWSMPSGMA*SRYLCCPSAPG
Trigger: TCCAGGAGCACTTGGGCAGCACAGGTACCTGCTGCATGCCATGCCTGAGGGCATCGACCAGAACGAACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433911.1
CDS TCA 72 bp CCCTGCCCAAGTGCTCCTGGAGCACCTGATAAACGCTaGTCCGGAACGTCTCATTGTCGAAGCGTTCCCGGA +
Preference number: 6 (lower is better)
Translates to: PCPSAPGAPDKR*SGTSHCRSVPG
Trigger: TCCGGGAACGCTTCGACAATGAGACGTTCCGGATCAGCGTTTATCAGGTGCTCCAGGAGCACTTGGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395863.8
ENST00000395864.7
ENST00000450594.6
ENST00000530870.1
CDS TCA 72 bp GAGGAGAAGAGAGTGTGGGAAACCATGCAGAAGGCCTaGGCCACAGCATCCCAACCCCCATGCTGGCCAGAA +
Preference number: 6 (lower is better)
Translates to: EEKRVWETMQKA*ATASQPPCWPE
Trigger: TTCTGGCCAGCATGGGGGTTGGGATGCTGTGGCTCAGGCCTTCTGCATGGTTTCCCACACTCTCTTCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476877.1
CDS GCA 72 bp AGGAAGAGATCCGATTCCCTGCCATGTCCTCTCCTCTaGTGGAACGTGAGCTTCCAGAGGGCAGGGACTCGT +
Preference number: 6 (lower is better)
Translates to: RKRSDSLPCPLL*WNVSFQRAGTR
Trigger: ACGAGTCCCTGCCCTCTGGAAGCTCACGTTCCAGCAGAGGAGAGGACATGGCAGGGAATCGGATCTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433911.1
CDS CCA 72 bp AAGAGATCCGATTCCCTGCCATGTCCTCTCCTCTGCTaGAACGTGAGCTTCCAGAGGGCAGGGACTCGTGTC +
Preference number: 6 (lower is better)
Translates to: KRSDSLPCPLLC*NVSFQRAGTRV
Trigger: GACACGAGTCCCTGCCCTCTGGAAGCTCACGTTCCAGCAGAGGAGAGGACATGGCAGGGAATCGGATCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433911.1
CDS TCA 72 bp TGCTGCCCAAGTGCTCCTGGAGCACCTGATAAACGCTaGTCCGGAACGTCTCATTGTCGAAGCGTTCCCGGA +
Preference number: 6 (lower is better)
Translates to: CCPSAPGAPDKR*SGTSHCRSVPG
Trigger: TCCGGGAACGCTTCGACAATGAGACGTTCCGGATCAGCGTTTATCAGGTGCTCCAGGAGCACTTGGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433911.1
CDS GCA 72 bp CATGAGATGAGTCCCAGGTGTAAGACAGCAAAGCCCTaGCACTCAGGGGCTTTTCCAGAACGAGAGGCGGGT +
Preference number: 6 (lower is better)
Translates to: HEMSPRCKTAKP*HSGAFPEREAG
Trigger: ACCCGCCTCTCGTTCTGGAAAAGCCCCTGAGTGGCAGGGCTTTGCTGTCTTACACCTGGGACTCATCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS CCA 72 bp CCGATTCCCTTCACCTGGAACCAAAGTCTGCACCAATaGAGACAGGAGCAAGTCCAGCTCCTGGAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: PIPFTWNQSLHQ*RQEQVQLLEAR
Trigger: CCTGGCTTCCAGGAGCTGGACTTGCTCCTGTCTCCATTGGTGCAGACTTTGGTTCCAGGTGAAGGGAATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460817.5
CDS GCA 72 bp GTGGAGTCACTCATTCATTCAGCCATTGCTAGGGGCTaGTTCCTGGTGTGCAGGCATGAGATGAGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: VESLIHSAIARG*FLVCRHEMSPR
Trigger: CCTGGGACTCATCTCATGCCTGCACACCAGGAAGCAGCCCCTAGCAATGGCTGAATGAATGAGTGACTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS GCA 72 bp GAAGAGATCCGATTCCCTTCACCTGGAACCAAAGTCTaGACCAATGGAGACAGGAGCAAGTCCAGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: EEIRFPSPGTKV*TNGDRSKSSSW
Trigger: CCAGGAGCTGGACTTGCTCCTGTCTCCATTGGTGCAGACTTTGGTTCCAGGTGAAGGGAATCGGATCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460817.5
CDS CCA 72 bp GCAAAAAGTCTCTCTGTACCTCTGAGTGAAGGTGTCTaGCTTGCCTTGGGCAGCTGTCAGGACAGCCACATC +
Preference number: 6 (lower is better)
Translates to: AKSLSVPLSEGV*LALGSCQDSHI
Trigger: GATGTGGCTGTCCTGACAGCTGCCCAAGGCAAGCCAGACACCTTCACTCAGAGGTACAGAGAGACTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS CAA 72 bp CTGCATGCCTTGTGGAGTCACTCATTCATTCAGCCATaGCTAGGGGCTGCTTCCTGGTGTGCAGGCATGAGA +
Preference number: 6 (lower is better)
Translates to: LHALWSHSFIQP*LGAASWCAGMR
Trigger: TCTCATGCCTGCACACCAGGAAGCAGCCCCTAGCAATGGCTGAATGAATGAGTGACTCCACAAGGCATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS GCA 72 bp ATTCATTCAGCCATTGCTAGGGGCTGCTTCCTGGTGTaGAGGCATGAGATGAGTCCCAGGTGTAAGACAGCA +
Preference number: 6 (lower is better)
Translates to: IHSAIARGCFLV*RHEMSPRCKTA
Trigger: TGCTGTCTTACACCTGGGACTCATCTCATGCCTGCACACCAGGAAGCAGCCCCTAGCAATGGCTGAATGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463939.1
CDS TCA 72 bp TCTATAGTCTTGGCCTATAGTCCAAGCTTAGTAGACTaGGTGGGAAGACGGCTCAAAGCTGCGGTGAGCTAT +
Preference number: 6 (lower is better)
Translates to: SIVLAYSPSLVD*VGRRLKAAVSY
Trigger: ATAGCTCACCGCAGCTTTGAGCCGTCTTCCCACTCAGTCTACTAAGCTTGGACTATAGGCCAAGACTATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476877.1