RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BMP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000153162

Ensembl transcript IDs: ENST00000283147.7

Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTTTTTGGGGGAGGAGGGTAGGAAGAGCTTCACGGTTATGTTTCTaGAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGC +
Preference number: 1 (lower is better)
Translates to: GFWGRRVGRASRLCF*SYQTLCYRHPNSAC
Trigger: GCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATAACCGTGAAGCTCTTCCTACCCTCCTCCCCCAAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR GCA 90 bp GTAGGAAGAGCTTCACGGTTATGTTTCTGCAGTTACCAGACCTTATaGTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACT +
Preference number: 1 (lower is better)
Translates to: VGRASRLCFCSYQTL*YRHPNSACYRPTTT
Trigger: AGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATAACCGTGAAGCTCTTCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR TCA 90 bp TTAATGAGGTCCTTTAAAATCTTCCTGGGTAATAAGGCACTGGCATaGGATAGTTTCAAAGTCTCATCGTCCCACCTCCAACTGTGCTTC +
Preference number: 1 (lower is better)
Translates to: LMRSFKIFLGNKALA*DSFKVSSSHLQLCF
Trigger: GAAGCACAGTTGGAGGTGGGACGATGAGACTTTGAAACTATCTCATGCCAGTGCCTTATTACCCAGGAAGATTTTAAAGGACCTCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR GCA 90 bp TTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTaGTACAGACCAACAACTACTCACGTCATTTACCAAGTGAGCAAA +
Preference number: 1 (lower is better)
Translates to: FCSYQTLCYRHPNSA*YRPTTTHVIYQVSK
Trigger: TTTGCTCACTTGGTAAATGACGTGAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR GCA 90 bp AGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTTaGATCACGAGTCTTGTATTCCAAGAAAATCAAAGTGGTACAATT +
Preference number: 1 (lower is better)
Translates to: REAQLSRVLYTQLQL*ITSLVFQENQSGTI
Trigger: AATTGTACCACTTTGATTTTCTTGGAATACAAGACTCGTGATGCAAAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR-3UTR TCA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGAACATACAACAGCAATaGCTGAGACAAGGGCGCCCC +
Preference number: 2 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMNIQQQ*LRQGRP
Trigger: GGGGCGCCCTTGTCTCAGTCATTGCTGTTGTATGTT...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR-3UTR TCA 90 bp GAGCATTGCCTTCACGTGTTACACGGTTACACACCCCTTGTAGCCTCACCTCAGACACCCCAAATAGCTTaGTCTACAGCTAAAACTAAT +
Preference number: 2 (lower is better)
Translates to: EHCLHVLHGYTPLVASPQTPQIA*STAKTN
Trigger: ATTAGTTTTAGCTGTAGATCAAGCTATTTGGGGTGT...CTGAGGTGAGGCTACAAGGGGTGTGTAACCGTGTAACACGTGAAGGCAATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR-3UTR GCA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGAGAAGAGGTGAGCATTaGCTTCACGTGTTACACGGT +
Preference number: 2 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMRRGEH*LHVLHG
Trigger: ACCGTGTAACACGTGAAGGCAATGCTCACCTCTTCT...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR-3UTR GCA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTCCCTGTGGCGTGGTATaGTGTATAGTAAAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLPCGVV*CIVKRQ
Trigger: CTGCCTTTTTACTATACAGCATACCACGCCACAGGG...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR CAA 90 bp TTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTaGCTACAGACCAACAACTACTCACGTCATTTACCAAGTGAGCAA +
Preference number: 2 (lower is better)
Translates to: FLQLPDLMLQTSKLS*LQTNNYSRHLPSEQ
Trigger: TTGCTCACTTGGTAAATGACGTGAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR-3UTR GCA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGAGTTACCAGACCTTATaGTACAGACATCCAAACTCA +
Preference number: 2 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMSYQTL*YRHPNS
Trigger: TGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACT...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR-3UTR CCA 90 bp AGCTTCACGGTTATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAATGGGTAATAAGGCACTaGCATGAGATAGTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: SFTVMFLQLPDLMLQTSKWVIRH*HEIVSK
Trigger: CTTTGAAACTATCTCATGCCAGTGCCTTATTACCCA...TTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATAACCGTGAAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR-3UTR TCA 90 bp AGTCTTGTACACACAACTTCAGCTTTGCATCACGAGTCTTGTATTCCAAGAAAACAGCAAATGGAGGATTaGGGTGTAGAAATGGTATGT +
Preference number: 2 (lower is better)
Translates to: SLVHTTSALHHESCIPRKQQMED*GVEMVC
Trigger: ACATACCATTTCTACACCTCAATCCTCCATTTGCTG...TTTTCTTGGAATACAAGACTCGTGATGCAAAGCTGAAGTTGTGTGTACAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR CAA 90 bp TGTCAAGAGTCTTGTACACACAACTTCAGCTTTGCATCACGAGTCTaGTATTCCAAGAAAATCAAAGTGGTACAATTTGTTTGTTTACAC +
Preference number: 2 (lower is better)
Translates to: CQESCTHNFSFASRV*YSKKIKVVQFVCLH
Trigger: GTGTAAACAAACAAATTGTACCACTTTGATTTTCTTGGAATACAAGACTCGTGATGCAAAGCTGAAGTTGTGTGTACAAGACTCTTGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR-3UTR CAA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGACATCCAAACTCAGCTaGCTACAGACCAACAACTAC +
Preference number: 3 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMTSKLS*LQTNNY
Trigger: GTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGT...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR GCA 72 bp GCTTCACGGTTATGTTTCTGCAGTTACCAGACCTTATaGTACAGACATCCAAACTCAGCTTGCTACAGACCA +
Preference number: 3 (lower is better)
Translates to: ASRLCFCSYQTL*YRHPNSACYRP
Trigger: TGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATAACCGTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR TCA 72 bp TCCTTTAAAATCTTCCTGGGTAATAAGGCACTGGCATaGGATAGTTTCAAAGTCTCATCGTCCCACCTCCAA +
Preference number: 3 (lower is better)
Translates to: SFKIFLGNKALA*DSFKVSSSHLQ
Trigger: TTGGAGGTGGGACGATGAGACTTTGAAACTATCTCATGCCAGTGCCTTATTACCCAGGAAGATTTTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR GCA 72 bp TACCAGACCTTATGCTACAGACATCCAAACTCAGCTTaGTACAGACCAACAACTACTCACGTCATTTACCAA +
Preference number: 3 (lower is better)
Translates to: YQTLCYRHPNSA*YRPTTTHVIYQ
Trigger: TTGGTAAATGACGTGAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR GCA 72 bp CAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTTaGATCACGAGTCTTGTATTCCAAGAAAATCAAAGT +
Preference number: 3 (lower is better)
Translates to: QLSRVLYTQLQL*ITSLVFQENQS
Trigger: ACTTTGATTTTCTTGGAATACAAGACTCGTGATGCAAAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp GAGCATTGCCTTCACGTGTTACACGGTTACACACCCCTTGTAGCCTCACCTCAGCGAACTCCGCGCCCCTaGGCTCTCGGGCACCGTCGC +
Preference number: 4 (lower is better)
Translates to: EHCLHVLHGYTPLVASPQRTPRP*ALGHRR
Trigger: GCGACGGTGCCCGAGAGCTCAGGGGCGCGGAGTTCG...CTGAGGTGAGGCTACAAGGGGTGTGTAACCGTGTAACACGTGAAGGCAATGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp GAGCATTGCCTTCACGTGTTACACGGTTACACACCCCTTGTAGCCTCACCTCAGGCCCCGCGCTCTCCCTaGCGACTGAGTGGGACCCGG +
Preference number: 4 (lower is better)
Translates to: EHCLHVLHGYTPLVASPQAPRSP*RLSGTR
Trigger: CCGGGTCCCACTCAGTCGCCAGGGAGAGCGCGGGGC...CTGAGGTGAGGCTACAAGGGGTGTGTAACCGTGTAACACGTGAAGGCAATGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp GAGCATTGCCTTCACGTGTTACACGGTTACACACCCCTTGTAGCCTCACCTCAGTTGCAGGGCCCAGGCTaGGGCGACAAGGCGTCCCGA +
Preference number: 4 (lower is better)
Translates to: EHCLHVLHGYTPLVASPQLQGPG*GDKASR
Trigger: TCGGGACGCCTTGTCGCCGCAGCCTGGGCCCTGCAA...CTGAGGTGAGGCTACAAGGGGTGTGTAACCGTGTAACACGTGAAGGCAATGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp GAGCATTGCCTTCACGTGTTACACGGTTACACACCCCTTGTAGCCTCACCTCAGGGCTGGAGGCTGACCTaGTGGTGCGCACGTGCACCT +
Preference number: 4 (lower is better)
Translates to: EHCLHVLHGYTPLVASPQGWRLT*WCARAP
Trigger: AGGTGCACGTGCGCACCACCAGGTCAGCCTCCAGCC...CTGAGGTGAGGCTACAAGGGGTGTGTAACCGTGTAACACGTGAAGGCAATGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp CCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACGAAGGCTCTTGCGGTTaGGCGGGTGCGCGGCGCCCG +
Preference number: 4 (lower is better)
Translates to: PDLMLQTSKLSLLQTNNYEGSCG*AGARRP
Trigger: CGGGCGCCGCGCACCCGCTCAACCGCAAGAGCCTTC...GTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGGGGACGCGCCGCCGCTaGCAGATCCGGGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMGTRRR*QIRGPE
Trigger: TTCTGGCCCCCGGATCTGGCAGCGGCGGCGCGTCCC...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp TTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGCGGCGGTCGCCCGGCTaGCCAGCAAACCCGCTCGCA +
Preference number: 4 (lower is better)
Translates to: FLQLPDLMLQTSKLSLLQRRSPG*PANPLA
Trigger: TGCGAGCGGGTTTGCTGGGCAGCCGGGCGACCGCCG...CTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp AGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACTCGCGGCGCGGTCACTCTaGGCCTCGCTGGCCGCACAC +
Preference number: 4 (lower is better)
Translates to: RPYATDIQTQLATDQQLLAARSL*ASLAAH
Trigger: GTGTGCGGCCAGCGAGGCCCAGAGTGACCGCGCCGC...GAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGGGCCGCTGTGGCCCTTaGCGTGAGCAGTCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMGRCGP*REQSPP
Trigger: TGGCGGGGACTGCTCACGCCAAGGGCCACAGCGGCC...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp AGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACTCCGCTGTCCTGCGCGCTaGTCAGTGGGGACGCGCCGC +
Preference number: 4 (lower is better)
Translates to: RPYATDIQTQLATDQQLLRCPAR*SVGTRR
Trigger: GCGGCGCGTCCCCACTGACCAGCGCGCAGGACAGCG...GAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp TATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTGCTCTCCCTGGCGACTaGGTGGGACCCGGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: YVSAVTRPYATDIQTQLAALPGD*VGPGAA
Trigger: CGCTGCCCCGGGTCCCACTCAGTCGCCAGGGAGAGC...AGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp CCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACCTGTGGCCCTTGGCGTaGGCAGTCCCCGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PDLMLQTSKLSLLQTNNYLWPLA*AVPATS
Trigger: AGAGGTGGCGGGGACTGCTCACGCCAAGGGCCACAG...GTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp GAGCATTGCCTTCACGTGTTACACGGTTACACACCCCTTGTAGCCTCACCTCAGCAGCCAGCCTTCTTCTaGGGCCCATACTACACGGGT +
Preference number: 4 (lower is better)
Translates to: EHCLHVLHGYTPLVASPQQPAFF*GPYYTG
Trigger: ACCCGTGTAGTATGGGCCTCAGAAGAAGGCTGGCTG...CTGAGGTGAGGCTACAAGGGGTGTGTAACCGTGTAACACGTGAAGGCAATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp AGCTTCACGGTTATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAAGCGCCGGCTGGAGGCTaGCCTGGTGGTGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: SFTVMFLQLPDLMLQTSKAPAGG*PGGAHV
Trigger: CACGTGCGCACCACCAGGTCAGCCTCCAGCCGGCGC...TTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATAACCGTGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp TATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTCTGCGCCCTGGCTCCTaGGAGTCGCGGCGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: YVSAVTRPYATDIQTQLALRPGS*ESRRGH
Trigger: GTGACCGCGCCGCGACTCGCAGGAGCCAGGGCGCAG...AGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp TATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTAAGCCCGAGGAGGACTaGGGCGACGGCGGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: YVSAVTRPYATDIQTQLAKPEED*GDGGGC
Trigger: GCAGCCGCCGCCGTCGCCGCAGTCCTCCTCGGGCTT...AGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGCGTAAGGGCCGTCTCTaGCCACCAGGCCTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMRKGRL*PPGLRL
Trigger: GAGCCGCAGGCCTGGTGGGCAGAGACGGCCCTTACG...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp CATGAGATAGTTTCAAAGTCTCATCGTCCCACCTCCAACTGTGCTTCCGTGTTTGCCCTGGCTGTGGCCTaGGCTGTGCGTCCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: HEIVSKSHRPTSNCASVFALAVA*AVRPVD
Trigger: GTCCACAGGACGCACAGCCCAGGCCACAGCCAGGGC...AAACACGGAAGCACAGTTGGAGGTGGGACGATGAGACTTTGAAACTATCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp CATGAGATAGTTTCAAAGTCTCATCGTCCCACCTCCAACTGTGCTTCCGTGTTTCCATGTCCGCGTCGTTaGGGAAGGCGCTGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: HEIVSKSHRPTSNCASVFPCPRR*GRRCPA
Trigger: CGCAGGACAGCGCCTTCCTCAACGACGCGGACATGG...AAACACGGAAGCACAGTTGGAGGTGGGACGATGAGACTTTGAAACTATCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp AGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACTCACGAGCTGCGGGAGATaGCCGGCATCACCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: RPYATDIQTQLATDQQLLTSCGR*PASPWR
Trigger: GCGCCACGGTGATGCCGGGCATCTCCCGCAGCTCGT...GAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp AGCTTCACGGTTATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAAGAGTCCGGGCTGCACTaGAGCCTGCGCCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SFTVMFLQLPDLMLQTSKESGLH*SLRPGS
Trigger: GGAGCCAGGGCGCAGGCTGCAGTGCAGCCCGGACTC...TTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATAACCGTGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp TTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGCGTCTGAGTCCGGGCTaGACTGCAGCCTGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: FLQLPDLMLQTSKLSLLQRLSPG*TAACAL
Trigger: CAGGGCGCAGGCTGCAGTGCAGCCCGGACTCAGACG...CTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp TATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTTGGGGCCAGGACTGCTaGCTCTCCCCCTCCGACGCC +
Preference number: 4 (lower is better)
Translates to: YVSAVTRPYATDIQTQLAWGQDC*LSPSDA
Trigger: GGCGTCGGAGGGGGAGAGGCAGCAGTCCTGGCCCCA...AGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTTCGTGGGGCCAGGACTaGTGCCTCTCCCCCTCCGAC +
Preference number: 4 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLSWGQD*CLSPSD
Trigger: GTCGGAGGGGGAGAGGCAGCAGTCCTGGCCCCACGA...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp TATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTTGCCCGGCATCACCGTaGCGCACGCCCCTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: YVSAVTRPYATDIQTQLACPASP*RTPLPR
Trigger: TCTGGGGAGGGGCGTGCGCCACGGTGATGCCGGGCA...AGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp TATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTTCCCTGGCGACTGAGTaGGACCCGGGGCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: YVSAVTRPYATDIQTQLASLATE*DPGQRG
Trigger: TCCCCGCTGCCCCGGGTCCCACTCAGTCGCCAGGGA...AGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp AGCTTCACGGTTATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACAGGCCAGGTGCGTCTaGGTCCGGGCTGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: SFTVMFLQLPDLMLQTSKQARCV*VRAALQ
Trigger: CTGCAGTGCAGCCCGGACTCAGACGCACCTGGCCTG...TTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATAACCGTGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGGCTTCTCCTGCGTCTTaGGCCGCCGGTACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMASPAS*AAGTGS
Trigger: GCTTCCTGTACCGGCGGCTCAAGACGCAGGAGAAGC...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp AGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACTCCTGGGACGAGCTGGCTaGTTCGTGGGGCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: RPYATDIQTQLATDQQLLLGRAG*FVGPGL
Trigger: CAGTCCTGGCCCCACGAAGCAGCCAGCTCGTCCCAG...GAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp AAATCTTCCTGGGTAATAAGGCACTGGCATGAGATAGTTTCAAAGTCTCATCGTCACTCTGGGCCTCGCTaGCCGCACACGTGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: KSSWVIRHWHEIVSKSHRHSGPR*PHTCAA
Trigger: GGCAGCGCACGTGTGCGGCCAGCGAGGCCCAGAGTG...ACGATGAGACTTTGAAACTATCTCATGCCAGTGCCTTATTACCCAGGAAGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp CATGAGATAGTTTCAAAGTCTCATCGTCCCACCTCCAACTGTGCTTCCGTGTTTACCAGGAGAACCGCTTaGAGGGGAGGAAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: HEIVSKSHRPTSNCASVFTRRTA*RGGRGA
Trigger: GGCTCCCCTTCCTCCCCTCCAAGCGGTTCTCCTGGT...AAACACGGAAGCACAGTTGGAGGTGGGACGATGAGACTTTGAAACTATCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTGAGCTGGCTGCTTCGTaGGGCCAGGACTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLELAAS*GQDCCL
Trigger: GAGGCAGCAGTCCTGGCCCCACGAAGCAGCCAGCTC...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp AGCTTCACGGTTATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAAGACGCTGGGACGAGCTaGCTGCTTCGTGGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SFTVMFLQLPDLMLQTSKDAGTS*LLRGAR
Trigger: CCTGGCCCCACGAAGCAGCCAGCTCGTCCCAGCGTC...TTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATAACCGTGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp CCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACATCTCCCGCTTCTCCTaGGTCTTGAGCCGCCGGTAC +
Preference number: 4 (lower is better)
Translates to: PDLMLQTSKLSLLQTNNYISRFS*VLSRRY
Trigger: GTACCGGCGGCTCAAGACGCAGGAGAAGCGGGAGAT...GTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp AGCTTCACGGTTATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAATCTCCGCGAGGCAGCTaGTGCTGCTGCTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SFTVMFLQLPDLMLQTSKSPRGS*CCCCCS
Trigger: GGAGCAGCAGCAGCAGCAGCAGCTGCCTCGCGGAGA...TTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATAACCGTGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp AGCTTCACGGTTATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAAAGGCGGCGAGGATCTTaGTTTCCGTTCGGCGGTCGC +
Preference number: 4 (lower is better)
Translates to: SFTVMFLQLPDLMLQTSKRRRGS*FPFGGR
Trigger: GCGACCGCCGAACGGAAAGCAAGATCCTCGCCGCCT...TTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATAACCGTGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp AGTCTTGTACACACAACTTCAGCTTTGCATCACGAGTCTTGTATTCCAAGAAAAGGGCCGCTCACGAGCTaGGGGAGATGCCCGGCATCA +
Preference number: 4 (lower is better)
Translates to: SLVHTTSALHHESCIPRKGPLTS*GRCPAS
Trigger: TGATGCCGGGCATCTCCCGCAGCTCGTGAGCGGCCC...TTTTCTTGGAATACAAGACTCGTGATGCAAAGCTGAAGTTGTGTGTACAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp TCAGCTTGCTACAGACCAACAACTACTCACGTCATTTACCAAGTGAGCAAATTAAGGAAGGCGCTGTCCTaGGCGCTGGTCAGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SACYRPTTTHVIYQVSKLRKALS*ALVSGD
Trigger: GTCCCCACTGACCAGCGCGCAGGACAGCGCCTTCCT...TAATTTGCTCACTTGGTAAATGACGTGAGTAGTTGTTGGTCTGTAGCAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp TATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTCCCAGGCTAGAGAGGTaGCGAAGGGGCGATCACCAG +
Preference number: 4 (lower is better)
Translates to: YVSAVTRPYATDIQTQLAPRLER*RRGDHQ
Trigger: CTGGTGATCGCCCCTTCGCCACCTCTCTAGCCTGGG...AGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp CCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACGCCACGTCCTGGGACTaGGTAGAGCGATTACGACTC +
Preference number: 4 (lower is better)
Translates to: PDLMLQTSKLSLLQTNNYATSWD*VERLRL
Trigger: GAGTCGTAATCGCTCTACCCAGTCCCAGGACGTGGC...GTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTATCGCAGGGCCACCATaGAGTTTACCCCGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLIAGPP*SLPRCR
Trigger: CCTGCAACGGGGTAAACTTCATGGTGGCCCTGCGAT...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp CATGAGATAGTTTCAAAGTCTCATCGTCCCACCTCCAACTGTGCTTCCGTGTTTTGTACAGATCCAGCATaGAGAGGGGCGCGGACTTCA +
Preference number: 4 (lower is better)
Translates to: HEIVSKSHRPTSNCASVFCTDPA*RGARTS
Trigger: TGAAGTCCGCGCCCCTCTTCATGCTGGATCTGTACA...AAACACGGAAGCACAGTTGGAGGTGGGACGATGAGACTTTGAAACTATCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp CATGAGATAGTTTCAAAGTCTCATCGTCCCACCTCCAACTGTGCTTCCGTGTTTCTGGTGGTGCGCACGTaGACCTCACTCACTTTGAAG +
Preference number: 4 (lower is better)
Translates to: HEIVSKSHRPTSNCASVFLVVRT*TSLTLK
Trigger: CTTCAAAGTGAGTGAGGTGCACGTGCGCACCACCAG...AAACACGGAAGCACAGTTGGAGGTGGGACGATGAGACTTTGAAACTATCTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTCGCTCGCAGAAAGGATaGGAAGGAAGGGGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLRSQKG*EGRGLV
Trigger: CACTAGCCCCCTTCCTTCCCATCCTTTCTGCGAGCG...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp TATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTAGTCCTTATCTCTCATaGTCGTCCGGGGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: YVSAVTRPYATDIQTQLASPYLS*SSGAPP
Trigger: TGGGGGCGCCCCGGACGACCATGAGAGATAAGGACT...AGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp AAATCTTCCTGGGTAATAAGGCACTGGCATGAGATAGTTTCAAAGTCTCATCGTGCTCGGGGGTGGACGTaGACTCCATCCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: KSSWVIRHWHEIVSKSHRARGWT*TPSLVT
Trigger: GGTGACAAGGGATGGAGTCCACGTCCACCCCCGAGC...ACGATGAGACTTTGAAACTATCTCATGCCAGTGCCTTATTACCCAGGAAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTTCTTTGTGGTGTCGCTaGCGAGGGGAGAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLSLWCR*RGENSL
Trigger: CAAGGAGTTCTCCCCTCGTCAGCGACACCACAAAGA...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp AGCTTCACGGTTATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAATACAACAGCAATGACTaGGACAAGGGCGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SFTVMFLQLPDLMLQTSKYNSND*DKGAPW
Trigger: CCACGGGGCGCCCTTGTCTCAGTCATTGCTGTTGTA...TTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATAACCGTGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp AGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACTCCAAGGCGTCCCGAAATaGCAGTCTATTCCGCGAGGT +
Preference number: 4 (lower is better)
Translates to: RPYATDIQTQLATDQQLLQGVPK*QSIPRG
Trigger: ACCTCGCGGAATAGACTGGCATTTCGGGACGCCTTG...GAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp AGTCTTGTACACACAACTTCAGCTTTGCATCACGAGTCTTGTATTCCAAGAAAATGGAGGCTGACCTGGTaGTGCGCACGTGCACCTCAC +
Preference number: 4 (lower is better)
Translates to: SLVHTTSALHHESCIPRKWRLTW*CARAPH
Trigger: GTGAGGTGCACGTGCGCACCACCAGGTCAGCCTCCA...TTTTCTTGGAATACAAGACTCGTGATGCAAAGCTGAAGTTGTGTGTACAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp AAATCTTCCTGGGTAATAAGGCACTGGCATGAGATAGTTTCAAAGTCTCATCGTACCCGCGCCACGTCCTaGGACTGGGTAGAGCGATTA +
Preference number: 4 (lower is better)
Translates to: KSSWVIRHWHEIVSKSHRTRATS*DWVERL
Trigger: TAATCGCTCTACCCAGTCCCAGGACGTGGCGCGGGT...ACGATGAGACTTTGAAACTATCTCATGCCAGTGCCTTATTACCCAGGAAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTGGGCTGTGCGTCCTGTaGACTTCTGGGAATGAACTG +
Preference number: 4 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLGLCVL*TSGNEL
Trigger: CAGTTCATTCCCAGAAGTCCACAGGACGCACAGCCC...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp CATGAGATAGTTTCAAAGTCTCATCGTCCCACCTCCAACTGTGCTTCCGTGTTTTCGGGGTTCATAAGGTaGACCAAGGTCTGCACAATC +
Preference number: 4 (lower is better)
Translates to: HEIVSKSHRPTSNCASVFSGFIR*TKVCTI
Trigger: GATTGTGCAGACCTTGGTTCACCTTATGAACCCCGA...AAACACGGAAGCACAGTTGGAGGTGGGACGATGAGACTTTGAAACTATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp TATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTGTAGATGCGGAATTCTaGAGCCGTCACCACCTCACC +
Preference number: 4 (lower is better)
Translates to: YVSAVTRPYATDIQTQLAVDAEF*SRHHLT
Trigger: GGTGAGGTGGTGACGGCTGCAGAATTCCGCATCTAC...AGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp CATGAGATAGTTTCAAAGTCTCATCGTCCCACCTCCAACTGTGCTTCCGTGTTTGCAATGATCCAGTCCTaGCATCCCAGGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: HEIVSKSHRPTSNCASVFAMIQS*HPRSWK
Trigger: TTTCCAAGACCTGGGATGGCAGGACTGGATCATTGC...AAACACGGAAGCACAGTTGGAGGTGGGACGATGAGACTTTGAAACTATCTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp GAGCATTGCCTTCACGTGTTACACGGTTACACACCCCTTGTAGCCTCACCTCAGAGTTACCAGACCTTATaGTACAGACATCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: EHCLHVLHGYTPLVASPQSYQTL*YRHPNS
Trigger: TGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACT...CTGAGGTGAGGCTACAAGGGGTGTGTAACCGTGTAACACGTGAAGGCAATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp CCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACCTGGTAAAGAAGAGGTaGGCATTGCCTTCACGTGTT +
Preference number: 4 (lower is better)
Translates to: PDLMLQTSKLSLLQTNNYLVKKR*ALPSRV
Trigger: AACACGTGAAGGCAATGCTCACCTCTTCTTTACCAG...GTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp CATGAGATAGTTTCAAAGTCTCATCGTCCCACCTCCAACTGTGCTTCCGTGTTTAATCGCGTGGTTGGTTaGATTCATGTGTGCGTTGAG +
Preference number: 4 (lower is better)
Translates to: HEIVSKSHRPTSNCASVFNRVVG*IHVCVE
Trigger: CTCAACGCACACATGAATGCAACCAACCACGCGATT...AAACACGGAAGCACAGTTGGAGGTGGGACGATGAGACTTTGAAACTATCTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp AGTCTTGTACACACAACTTCAGCTTTGCATCACGAGTCTTGTATTCCAAGAAAAGCGCACAGCACGGTTTaGGGACATACTCGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SLVHTTSALHHESCIPRKAHSTV*GHTRGS
Trigger: TGAACCCCGAGTATGTCCCCAAACCGTGCTGTGCGC...TTTTCTTGGAATACAAGACTCGTGATGCAAAGCTGAAGTTGTGTGTACAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp AGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACTCTGTGTCCCCAGCATCTaGTTTCGAGTTAGTGGCATC +
Preference number: 4 (lower is better)
Translates to: RPYATDIQTQLATDQQLLCVPSI*FRVSGI
Trigger: GATGCCACTAACTCGAAACCAGATGCTGGGGACACA...GAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp AGTCTTGTACACACAACTTCAGCTTTGCATCACGAGTCTTGTATTCCAAGAAAAACTGCTGTTGTAATCTaGAGCACTGGAGACCCGCGC +
Preference number: 4 (lower is better)
Translates to: SLVHTTSALHHESCIPRKTAVVI*STGDPR
Trigger: GCGCGGGTCTCCAGTGCTTCAGATTACAACAGCAGT...TTTTCTTGGAATACAAGACTCGTGATGCAAAGCTGAAGTTGTGTGTACAAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTAGAGAACCACTTTACTaGAAAGGTACTAGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLREPLY*KGTRAG
Trigger: GCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCT...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp AAATCTTCCTGGGTAATAAGGCACTGGCATGAGATAGTTTCAAAGTCTCATCGTGACAAGATCTCCTTCTaGATCTCCCGCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KSSWVIRHWHEIVSKSHRDKISF*ISRFSC
Trigger: GCAGGAGAAGCGGGAGATGCAGAAGGAGATCTTGTC...ACGATGAGACTTTGAAACTATCTCATGCCAGTGCCTTATTACCCAGGAAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp TTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGCCCTGTGGCGTGGTATaGTGTATAGTAAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FLQLPDLMLQTSKLSLLQPCGVV*CIVKRQ
Trigger: CTGCCTTTTTACTATACAGCATACCACGCCACAGGG...CTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTGTCTGCACAATCGCGTaGTTGGTTGCATTCATGTGT +
Preference number: 4 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLVCTIA*LVAFMC
Trigger: ACACATGAATGCAACCAACCACGCGATTGTGCAGAC...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp TCAGCTTGCTACAGACCAACAACTACTCACGTCATTTACCAAGTGAGCAAATTACATTCATGTGTGCGTTaGGTGGGAAGGAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: SACYRPTTTHVIYQVSKLHSCVR*VGRSIL
Trigger: GAGAATGCTCCTTCCCACTCAACGCACACATGAATG...TAATTTGCTCACTTGGTAAATGACGTGAGTAGTTGTTGGTCTGTAGCAAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGCAGCAAATGGAGGATTaGGGTGTAGAAATGGTATGT +
Preference number: 4 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMQQMED*GVEMVC
Trigger: ACATACCATTTCTACACCTCAATCCTCCATTTGCTG...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp TCAGCTTGCTACAGACCAACAACTACTCACGTCATTTACCAAGTGAGCAAATTAGCACAATCGCGTGGTTaGTTGCATTCATGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: SACYRPTTTHVIYQVSKLAQSRG*LHSCVR
Trigger: ACGCACACATGAATGCAACCAACCACGCGATTGTGC...TAATTTGCTCACTTGGTAAATGACGTGAGTAGTTGTTGGTCTGTAGCAAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGAATAAGGCACTGGCATaGGATAGTTTCAAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMNKALA*DSFKVS
Trigger: TGAGACTTTGAAACTATCTCATGCCAGTGCCTTATT...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp AAATCTTCCTGGGTAATAAGGCACTGGCATGAGATAGTTTCAAAGTCTCATCGTAGAAGAGGTGAGCATTaGCTTCACGTGTTACACGGT +
Preference number: 4 (lower is better)
Translates to: KSSWVIRHWHEIVSKSHRRRGEH*LHVLHG
Trigger: ACCGTGTAACACGTGAAGGCAATGCTCACCTCTTCT...ACGATGAGACTTTGAAACTATCTCATGCCAGTGCCTTATTACCCAGGAAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGCCTTTAAAATCTTCCTaGGTAATAAGGCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMPLKSS*VIRHWH
Trigger: ATGCCAGTGCCTTATTACCCAGGAAGATTTTAAAGG...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp AGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACTCCAGAAGTTAATGTGCTaGTCAAAGAACCGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RPYATDIQTQLATDQQLLQKLMC*SKNRSG
Trigger: ACCAGAACGGTTCTTTGACCAGCACATTAACTTCTG...GAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR CAA 72 bp TTACCAGACCTTATGCTACAGACATCCAAACTCAGCTaGCTACAGACCAACAACTACTCACGTCATTTACCA +
Preference number: 4 (lower is better)
Translates to: LPDLMLQTSKLS*LQTNNYSRHLP
Trigger: TGGTAAATGACGTGAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTCTACAAGGGAAATCATaGTTTCCGTTCATAAACAGC +
Preference number: 4 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLLQGKS*FPFINS
Trigger: GCTGTTTATGAACGGAAATCATGATTTCCCTTGTAG...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp AGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACTCACACAACTTCAGCTTTaGATCACGAGTCTTGTATTC +
Preference number: 4 (lower is better)
Translates to: RPYATDIQTQLATDQQLLTQLQL*ITSLVF
Trigger: GAATACAAGACTCGTGATGCAAAGCTGAAGTTGTGT...GAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp TATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTTCACCCTCAGGAATCTaGGATAAGTTGAACTTGAAC +
Preference number: 4 (lower is better)
Translates to: YVSAVTRPYATDIQTQLASPSGI*DKLNLN
Trigger: GTTCAAGTTCAACTTATCCCAGATTCCTGAGGGTGA...AGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp TTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGTGGGTAATAAGGCACTaGCATGAGATAGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: FLQLPDLMLQTSKLSLLQWVIRH*HEIVSK
Trigger: CTTTGAAACTATCTCATGCCAGTGCCTTATTACCCA...CTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR TCA 90 bp TTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACACCCCAAATAGCTTaGTCTACAGCTAAAACTAAT +
Preference number: 4 (lower is better)
Translates to: FLQLPDLMLQTSKLSLLQTPQIA*STAKTN
Trigger: ATTAGTTTTAGCTGTAGATCAAGCTATTTGGGGTGT...CTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp TTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGCTGTTTTCAATTCACTaGTGTTGTAATCTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: FLQLPDLMLQTSKLSLLQLFSIH*CCNLKH
Trigger: GTGCTTCAGATTACAACAGCAGTGAATTGAAAACAG...CTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR GCA 90 bp AGTCTTGTACACACAACTTCAGCTTTGCATCACGAGTCTTGTATTCCAAGAAAATCACGGTTATGTTTCTaGAGTTACCAGACCTTATGC +
Preference number: 4 (lower is better)
Translates to: SLVHTTSALHHESCIPRKSRLCF*SYQTLC
Trigger: GCATAAGGTCTGGTAACTGCAGAAACATAACCGTGA...TTTTCTTGGAATACAAGACTCGTGATGCAAAGCTGAAGTTGTGTGTACAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CCA 90 bp AGCTTCACGGTTATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAAACCATTCTTATAAGCTaGGCACCCTCATTTTATTTT +
Preference number: 4 (lower is better)
Translates to: SFTVMFLQLPDLMLQTSKTILIS*APSFYF
Trigger: AAAATAAAATGAGGGTGCCCAGCTTATAAGAATGGT...TTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATAACCGTGAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR CAA 72 bp ACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTaGCATCACGAGTCTTGTATTCCAAGAAAATCAAAG +
Preference number: 4 (lower is better)
Translates to: TTVKSLVHTTSA*HHESCIPRKSK
Trigger: CTTTGATTTTCTTGGAATACAAGACTCGTGATGCAAAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
3UTR CAA 72 bp TCTTGTACACACAACTTCAGCTTTGCATCACGAGTCTaGTATTCCAAGAAAATCAAAGTGGTACAATTTGTT +
Preference number: 4 (lower is better)
Translates to: SCTHNFSFASRV*YSKKIKVVQFV
Trigger: AACAAATTGTACCACTTTGATTTTCTTGGAATACAAGACTCGTGATGCAAAGCTGAAGTTGTGTGTACAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS TCA 90 bp ACGCGCCGCCGCTGCCAGATCCGGGGGCCAGAAGGCTCTTGCGGTTaGGCGGGTGCGCGGCGCCCGGGGGCGGCTGCCGACGCTGGGACG +
Preference number: 5 (lower is better)
Translates to: TRRRCQIRGPEGSCG*AGARRPGAAADAGT
Trigger: CGTCCCAGCGTCGGCAGCCGCCCCCGGGCGCCGCGCACCCGCTCAACCGCAAGAGCCTTCTGGCCCCCGGATCTGGCAGCGGCGGCGCGT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 90 bp GTCGCGGCGCGGTCACTCTGGGCCTCGCTGGCCGCACACGTGCGCTaGCCCGCGCTCTCCCTGGCGACTGAGTGGGACCCGGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: VAARSLWASLAAHVR*PALSLATEWDPGQR
Trigger: CCGCTGCCCCGGGTCCCACTCAGTCGCCAGGGAGAGCGCGGGGCAGCGCACGTGTGCGGCCAGCGAGGCCCAGAGTGACCGCGCCGCGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 90 bp GCGTGGAGCGGCGGAGCGAGGCCGGAGCGCGGCCGCTGTGGCCCTTaGCGTGAGCAGTCCCCGCCACCTCTCGGCGGGCTCGCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: AWSGGARPERGRCGP*REQSPPPLGGLASP
Trigger: AGGGGAAGCGAGCCCGCCGAGAGGTGGCGGGGACTGCTCACGCCAAGGGCCACAGCGGCCGCGCTCCGGCCTCGCTCCGCCGCTCCACGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 90 bp TGCGAGTCGCGGCGCGGTCACTCTGGGCCTCGCTGGCCGCACACGTaGGCTGCCCCGCGCTCTCCCTGGCGACTGAGTGGGACCCGGGGC +
Preference number: 5 (lower is better)
Translates to: CESRRGHSGPRWPHT*AAPRSPWRLSGTRG
Trigger: GCCCCGGGTCCCACTCAGTCGCCAGGGAGAGCGCGGGGCAGCGCACGTGTGCGGCCAGCGAGGCCCAGAGTGACCGCGCCGCGACTCGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 90 bp GGCGCGGACTTCAGTCGCCCGGGAGGGGGCTCTCCGCGAGGCAGCTaGTGCTGCTGCTGCTGCTCCTCCTGCTGCCGGAGCGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: GADFSRPGGGSPRGS*CCCCCSSCCRSAGG
Trigger: GCCCCCGGCGCTCCGGCAGCAGGAGGAGCAGCAGCAGCAGCAGCAGCTGCCTCGCGGAGAGCCCCCTCCCGGGCGACTGAAGTCCGCGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 90 bp CCGCTGCCAGATCCGGGGGCCAGAAGGCTCTTGCGGTTGAGCGGGTaGGCGGCGCCCGGGGGCGGCTGCCGACGCTGGGACGAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: PLPDPGARRLLRLSG*AAPGGGCRRWDELA
Trigger: AGCCAGCTCGTCCCAGCGTCGGCAGCCGCCCCCGGGCGCCGCGCACCCGCTCAACCGCAAGAGCCTTCTGGCCCCCGGATCTGGCAGCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 90 bp CTGCAGCCTGCGCCCTGGCTCCTGCGAGTCGCGGCGCGGTCACTCTaGGCCTCGCTGGCCGCACACGTGCGCTGCCCCGCGCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LQPAPWLLRVAARSL*ASLAAHVRCPALSL
Trigger: CAGGGAGAGCGCGGGGCAGCGCACGTGTGCGGCCAGCGAGGCCCAGAGTGACCGCGCCGCGACTCGCAGGAGCCAGGGCGCAGGCTGCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 90 bp CGCCCTGGCTCCTGCGAGTCGCGGCGCGGTCACTCTGGGCCTCGCTaGCCGCACACGTGCGCTGCCCCGCGCTCTCCCTGGCGACTGAGT +
Preference number: 5 (lower is better)
Translates to: RPGSCESRRGHSGPR*PHTCAAPRSPWRLS
Trigger: ACTCAGTCGCCAGGGAGAGCGCGGGGCAGCGCACGTGTGCGGCCAGCGAGGCCCAGAGTGACCGCGCCGCGACTCGCAGGAGCCAGGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 90 bp GGTGCGTCTGAGTCCGGGCTGCACTGCAGCCTGCGCCCTGGCTCCTaGGAGTCGCGGCGCGGTCACTCTGGGCCTCGCTGGCCGCACACG +
Preference number: 5 (lower is better)
Translates to: GASESGLHCSLRPGS*ESRRGHSGPRWPHT
Trigger: CGTGTGCGGCCAGCGAGGCCCAGAGTGACCGCGCCGCGACTCGCAGGAGCCAGGGCGCAGGCTGCAGTGCAGCCCGGACTCAGACGCACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 90 bp AGAAGGCTCTTGCGGTTGAGCGGGTGCGCGGCGCCCGGGGGCGGCTaGCGACGCTGGGACGAGCTGGCTGCTTCGTGGGGCCAGGACTGC +
Preference number: 5 (lower is better)
Translates to: RRLLRLSGCAAPGGG*RRWDELAASWGQDC
Trigger: GCAGTCCTGGCCCCACGAAGCAGCCAGCTCGTCCCAGCGTCGGCAGCCGCCCCCGGGCGCCGCGCACCCGCTCAACCGCAAGAGCCTTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 90 bp AGAGGCGCGCGGTCCAGGCCAGGTGCGTCTGAGTCCGGGCTGCACTaGAGCCTGCGCCCTGGCTCCTGCGAGTCGCGGCGCGGTCACTCT +
Preference number: 5 (lower is better)
Translates to: RGARSRPGASESGLH*SLRPGSCESRRGHS
Trigger: AGAGTGACCGCGCCGCGACTCGCAGGAGCCAGGGCGCAGGCTGCAGTGCAGCCCGGACTCAGACGCACCTGGCCTGGACCGCGCGCCTCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 90 bp TCTCCGCGCGCCGCACGCCTCCTCAAGCGGAGGCGGCGAGGATCTTaGTTTCCGTTCGGCGGTCGCCCGGCTGCCCAGCAAACCCGCTCG +
Preference number: 5 (lower is better)
Translates to: SPRAARLLKRRRRGS*FPFGGRPAAQQTRS
Trigger: CGAGCGGGTTTGCTGGGCAGCCGGGCGACCGCCGAACGGAAAGCAAGATCCTCGCCGCCTCCGCTTGAGGAGGCGTGCGGCGCGCGGAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 90 bp TTCGGCGGTCGCCCGGCTGCCCAGCAAACCCGCTCGCAGAAAGGATaGGAAGGAAGGGGGCTAGTGCACCGAGCAGCGGCCGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: FGGRPAAQQTRSQKG*EGRGLVHRAAAAAA
Trigger: CGCCGCCGCGGCCGCTGCTCGGTGCACTAGCCCCCTTCCTTCCCATCCTTTCTGCGAGCGGGTTTGCTGGGCAGCCGGGCGACCGCCGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 90 bp CATGTCCGCGTCGTTGAGGAAGGCGCTGTCCTGCGCGCTGGTCAGTaGGGACGCGCCGCCGCTGCCAGATCCGGGGGCCAGAAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: HVRVVEEGAVLRAGQ*GRAAAARSGGQKAL
Trigger: AAGAGCCTTCTGGCCCCCGGATCTGGCAGCGGCGGCGCGTCCCCACTGACCAGCGCGCAGGACAGCGCCTTCCTCAACGACGCGGACATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 90 bp GCGGAGGCGGCGAGGATCTTGCTTTCCGTTCGGCGGTCGCCCGGCTaGCCAGCAAACCCGCTCGCAGAAAGGATGGGAAGGAAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: AEAARILLSVRRSPG*PANPLAERMGRKGA
Trigger: AGCCCCCTTCCTTCCCATCCTTTCTGCGAGCGGGTTTGCTGGGCAGCCGGGCGACCGCCGAACGGAAAGCAAGATCCTCGCCGCCTCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 90 bp GGCCGGGGCCGGTGCGGGAGCCCCAGCACCGACAAGATCTCCTTCTaGATCTCCCGCTTCTCCTGCGTCTTGAGCCGCCGGTACAGGAAG +
Preference number: 5 (lower is better)
Translates to: GRGRCGSPSTDKISF*ISRFSCVLSRRYRK
Trigger: CTTCCTGTACCGGCGGCTCAAGACGCAGGAGAAGCGGGAGATGCAGAAGGAGATCTTGTCGGTGCTGGGGCTCCCGCACCGGCCCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 90 bp GATCGCAGGGCCACCATGAAGTTTACCCCGTTGCAGGGCCCAGGCTaGGGCGACAAGGCGTCCCGAAATGCCAGTCTATTCCGCGAGGTT +
Preference number: 5 (lower is better)
Translates to: DRRATMKFTPLQGPG*GDKASRNASLFREV
Trigger: AACCTCGCGGAATAGACTGGCATTTCGGGACGCCTTGTCGCCGCAGCCTGGGCCCTGCAACGGGGTAAACTTCATGGTGGCCCTGCGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 90 bp TACCCCGTTGCAGGGCCCAGGCTGCGGCGACAAGGCGTCCCGAAATaGCAGTCTATTCCGCGAGGTTTAACTTCCTTCTCGCTCACGAAC +
Preference number: 5 (lower is better)
Translates to: YPVAGPRLRRQGVPK*QSIPRGLTSFSLTN
Trigger: GTTCGTGAGCGAGAAGGAAGTTAAACCTCGCGGAATAGACTGGCATTTCGGGACGCCTTGTCGCCGCAGCCTGGGCCCTGCAACGGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp GAGCATTGCCTTCACGTGTTACACGGTTACACACCCCTTGTAGCCTCACCTCAGGAGGCGGCGAGGATCTaGCTTTCCGTTCGGCGGTCG +
Preference number: 5 (lower is better)
Translates to: EHCLHVLHGYTPLVASPQEAARI*LSVRRS
Trigger: CGACCGCCGAACGGAAAGCAAGATCCTCGCCGCCTC...CTGAGGTGAGGCTACAAGGGGTGTGTAACCGTGTAACACGTGAAGGCAATGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp CCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACCCGGGGCGCCCCCAGTaGCCCAGGCTAGAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: PDLMLQTSKLSLLQTNNYPGRPQ*PRLERW
Trigger: CCACCTCTCTAGCCTGGGCAACTGGGGGCGCCCCGG...GTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTAGAAGGCTCTTGCGGTaGAGCGGGTGCGCGGCGCCC +
Preference number: 5 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLRRLLR*SGCAAP
Trigger: GGGCGCCGCGCACCCGCTCAACCGCAAGAGCCTTCT...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGACCATGTCCGCGTCGTaGAGGAAGGCGCTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMTMSAS*RKALSC
Trigger: GCAGGACAGCGCCTTCCTCAACGACGCGGACATGGT...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTATGAAGTTTACCCCGTaGCAGGGCCCAGGCTGCGGC +
Preference number: 5 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLMKFTP*QGPGCG
Trigger: GCCGCAGCCTGGGCCCTGCAACGGGGTAAACTTCAT...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp AGACCTTATGCTACAGACATCCAAACTCAGCTTGCTACAGACCAACAACTACTCCGCTTCTCCTGCGTCTaGAGCCGCCGGTACAGGAAG +
Preference number: 5 (lower is better)
Translates to: RPYATDIQTQLATDQQLLRFSCV*SRRYRK
Trigger: CTTCCTGTACCGGCGGCTCAAGACGCAGGAGAAGCG...GAGTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp TCAGCTTGCTACAGACCAACAACTACTCACGTCATTTACCAAGTGAGCAAATTAGCGATTACGACTCTGTaGTCGGCGCCGGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: SACYRPTTTHVIYQVSKLAITTL*SAPAGG
Trigger: GCCTCCAGCCGGCGCCGACAACAGAGTCGTAATCGC...TAATTTGCTCACTTGGTAAATGACGTGAGTAGTTGTTGGTCTGTAGCAAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp TCAGCTTGCTACAGACCAACAACTACTCACGTCATTTACCAAGTGAGCAAATTAGGCGCACAGCACGGTTaGGGGACATACTCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: SACYRPTTTHVIYQVSKLGAQHG*GTYSGF
Trigger: GAACCCCGAGTATGTCCCCAAACCGTGCTGTGCGCC...TAATTTGCTCACTTGGTAAATGACGTGAGTAGTTGTTGGTCTGTAGCAAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp TATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTCGAGGGGAGAACTCCTaGTCGTACTCCACCAGGTTC +
Preference number: 5 (lower is better)
Translates to: YVSAVTRPYATDIQTQLARGENS*SYSTRF
Trigger: GAACCTGGTGGAGTACGACAAGGAGTTCTCCCCTCG...AGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp TATGTTTCTGCAGTTACCAGACCTTATGCTACAGACATCCAAACTCAGCTTGCTTGCACAATCGCGTGGTaGGTTGCATTCATGTGTGCG +
Preference number: 5 (lower is better)
Translates to: YVSAVTRPYATDIQTQLACTIAW*VAFMCA
Trigger: CGCACACATGAATGCAACCAACCACGCGATTGTGCA...AGCAAGCTGAGTTTGGATGTCTGTAGCATAAGGTCTGGTAACTGCAGAAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp GCAGAGAACCACTTTACTGAAAAGGTACTAGAGCCGGCAGTCCAGAAGTTAATGGGAATCTGGGATAAGTaGAACTTGAACTCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: AENHFTEKVLEPAVQKLMGIWDK*NLNSLW
Trigger: CCACAAAGAGTTCAAGTTCAACTTATCCCAGATTCC...CATTAACTTCTGGACTGCCGGCTCTAGTACCTTTTCAGTAAAGTGGTTCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp CAACCTCCTAGAGAAGCACAACTGTCAAGAGTCTTGTACACACAACTTCAGCTTCACACAACTTCAGCTTaGCATCACGAGTCTTGTATT +
Preference number: 5 (lower is better)
Translates to: QPPREAQLSRVLYTQLQLHTTSA*HHESCI
Trigger: AATACAAGACTCGTGATGCAAAGCTGAAGTTGTGTG...AAGCTGAAGTTGTGTGTACAAGACTCTTGACAGTTGTGCTTCTCTAGGAGGTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp TCAGCTTGCTACAGACCAACAACTACTCACGTCATTTACCAAGTGAGCAAATTATGGGATAAGTTGAACTaGAACTCTTTGTGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: SACYRPTTTHVIYQVSKLWDKLN*NSLWCR
Trigger: GCGACACCACAAAGAGTTCAAGTTCAACTTATCCCA...TAATTTGCTCACTTGGTAAATGACGTGAGTAGTTGTTGGTCTGTAGCAAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS-3UTR CAA 90 bp AAATCTTCCTGGGTAATAAGGCACTGGCATGAGATAGTTTCAAAGTCTCATCGTACATCCAAACTCAGCTaGCTACAGACCAACAACTAC +
Preference number: 5 (lower is better)
Translates to: KSSWVIRHWHEIVSKSHRTSKLS*LQTNNY
Trigger: GTAGTTGTTGGTCTGTAGCAAGCTGAGTTTGGATGT...ACGATGAGACTTTGAAACTATCTCATGCCAGTGCCTTATTACCCAGGAAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 72 bp GCGCCCTGGCTCCTGCGAGTCGCGGCGCGGTCACTCTaGGCCTCGCTGGCCGCACACGTGCGCTGCCCCGCG +
Preference number: 6 (lower is better)
Translates to: APWLLRVAARSL*ASLAAHVRCPA
Trigger: CGCGGGGCAGCGCACGTGTGCGGCCAGCGAGGCCCAGAGTGACCGCGCCGCGACTCGCAGGAGCCAGGGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 72 bp GGCGGAGCGAGGCCGGAGCGCGGCCGCTGTGGCCCTTaGCGTGAGCAGTCCCCGCCACCTCTCGGCGGGCTC +
Preference number: 6 (lower is better)
Translates to: GGARPERGRCGP*REQSPPPLGGL
Trigger: GAGCCCGCCGAGAGGTGGCGGGGACTGCTCACGCCAAGGGCCACAGCGGCCGCGCTCCGGCCTCGCTCCGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp CCGGGAGGGGGCTCTCCGCGAGGCAGCTGCTGCTGCTaGTGCTGCTCCTCCTGCTGCCGGAGCGCCGGGGGC +
Preference number: 6 (lower is better)
Translates to: PGGGSPRGSCCC*CCSSCCRSAGG
Trigger: GCCCCCGGCGCTCCGGCAGCAGGAGGAGCAGCAGCAGCAGCAGCAGCTGCCTCGCGGAGAGCCCCCTCCCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp CGCCCGGGAGGGGGCTCTCCGCGAGGCAGCTGCTGCTaGTGCTGCTGCTCCTCCTGCTGCCGGAGCGCCGGG +
Preference number: 6 (lower is better)
Translates to: RPGGGSPRGSCC*CCCSSCCRSAG
Trigger: CCCGGCGCTCCGGCAGCAGGAGGAGCAGCAGCAGCAGCAGCAGCTGCCTCGCGGAGAGCCCCCTCCCGGGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp TTGCGGTTGAGCGGGTGCGCGGCGCCCGGGGGCGGCTaGCGACGCTGGGACGAGCTGGCTGCTTCGTGGGGC +
Preference number: 6 (lower is better)
Translates to: LRLSGCAAPGGG*RRWDELAASWG
Trigger: GCCCCACGAAGCAGCCAGCTCGTCCCAGCGTCGGCAGCCGCCCCCGGGCGCCGCGCACCCGCTCAACCGCAA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp GATCCGGGGGCCAGAAGGCTCTTGCGGTTGAGCGGGTaGGCGGCGCCCGGGGGCGGCTGCCGACGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: DPGARRLLRLSG*AAPGGGCRRWD
Trigger: GTCCCAGCGTCGGCAGCCGCCCCCGGGCGCCGCGCACCCGCTCAACCGCAAGAGCCTTCTGGCCCCCGGATC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 72 bp CGGCGCCCGGGGGCGGCTGCCGACGCTGGGACGAGCTaGCTGCTTCGTGGGGCCAGGACTGCTGCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: RRPGAAADAGTS*LLRGARTAASP
Trigger: GGGAGAGGCAGCAGTCCTGGCCCCACGAAGCAGCCAGCTCGTCCCAGCGTCGGCAGCCGCCCCCGGGCGCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp CGGCGCGGTCACTCTGGGCCTCGCTGGCCGCACACGTaGGCTGCCCCGCGCTCTCCCTGGCGACTGAGTGGG +
Preference number: 6 (lower is better)
Translates to: RRGHSGPRWPHT*AAPRSPWRLSG
Trigger: CCCACTCAGTCGCCAGGGAGAGCGCGGGGCAGCGCACGTGTGCGGCCAGCGAGGCCCAGAGTGACCGCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp CGGTCACTCTGGGCCTCGCTGGCCGCACACGTGCGCTaGCCCGCGCTCTCCCTGGCGACTGAGTGGGACCCG +
Preference number: 6 (lower is better)
Translates to: RSLWASLAAHVR*PALSLATEWDP
Trigger: CGGGTCCCACTCAGTCGCCAGGGAGAGCGCGGGGCAGCGCACGTGTGCGGCCAGCGAGGCCCAGAGTGACCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp GAGTCCGGGCTGCACTGCAGCCTGCGCCCTGGCTCCTaGGAGTCGCGGCGCGGTCACTCTGGGCCTCGCTGG +
Preference number: 6 (lower is better)
Translates to: ESGLHCSLRPGS*ESRRGHSGPRW
Trigger: CCAGCGAGGCCCAGAGTGACCGCGCCGCGACTCGCAGGAGCCAGGGCGCAGGCTGCAGTGCAGCCCGGACTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp CGGTCCAGGCCAGGTGCGTCTGAGTCCGGGCTGCACTaGAGCCTGCGCCCTGGCTCCTGCGAGTCGCGGCGC +
Preference number: 6 (lower is better)
Translates to: RSRPGASESGLH*SLRPGSCESRR
Trigger: GCGCCGCGACTCGCAGGAGCCAGGGCGCAGGCTGCAGTGCAGCCCGGACTCAGACGCACCTGGCCTGGACCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp CCGCGAGGCAGCTGCTGCTGCTGCTGCTGCTCCTCCTaGTGCCGGAGCGCCGGGGGCTGCGGCTGTTGGAGG +
Preference number: 6 (lower is better)
Translates to: PRGSCCCCCCSS*CRSAGGCGCWR
Trigger: CCTCCAACAGCCGCAGCCCCCGGCGCTCCGGCAGCAGGAGGAGCAGCAGCAGCAGCAGCAGCTGCCTCGCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp AGTCGCCCGGGAGGGGGCTCTCCGCGAGGCAGCTGCTaGTGCTGCTGCTGCTCCTCCTGCTGCCGGAGCGCC +
Preference number: 6 (lower is better)
Translates to: SRPGGGSPRGSC*CCCCSSCCRSA
Trigger: GGCGCTCCGGCAGCAGGAGGAGCAGCAGCAGCAGCAGCAGCTGCCTCGCGGAGAGCCCCCTCCCGGGCGACT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 72 bp GGCGGCTGCCGACGCTGGGACGAGCTGGCTGCTTCGTaGGGCCAGGACTGCTGCCTCTCCCCCTCCGACGCC +
Preference number: 6 (lower is better)
Translates to: GGCRRWDELAAS*GQDCCLSPSDA
Trigger: GGCGTCGGAGGGGGAGAGGCAGCAGTCCTGGCCCCACGAAGCAGCCAGCTCGTCCCAGCGTCGGCAGCCGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 72 bp GTCGTTGAGGAAGGCGCTGTCCTGCGCGCTGGTCAGTaGGGACGCGCCGCCGCTGCCAGATCCGGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: VVEEGAVLRAGQ*GRAAAARSGGQ
Trigger: CTGGCCCCCGGATCTGGCAGCGGCGGCGCGTCCCCACTGACCAGCGCGCAGGACAGCGCCTTCCTCAACGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp TTCAGTCGCCCGGGAGGGGGCTCTCCGCGAGGCAGCTaGTGCTGCTGCTGCTGCTCCTCCTGCTGCCGGAGC +
Preference number: 6 (lower is better)
Translates to: FSRPGGGSPRGS*CCCCCSSCCRS
Trigger: GCTCCGGCAGCAGGAGGAGCAGCAGCAGCAGCAGCAGCTGCCTCGCGGAGAGCCCCCTCCCGGGCGACTGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 72 bp CCGCTCACGAGCTGCGGGAGATGCCCGGCATCACCGTaGCGCACGCCCCTCCCCAGATCGCAGGGCCACCAT +
Preference number: 6 (lower is better)
Translates to: PLTSCGRCPASP*RTPLPRSQGHH
Trigger: ATGGTGGCCCTGCGATCTGGGGAGGGGCGTGCGCCACGGTGATGCCGGGCATCTCCCGCAGCTCGTGAGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CAA 72 bp CGCCGCACGCCTCCTCAAGCGGAGGCGGCGAGGATCTaGCTTTCCGTTCGGCGGTCGCCCGGCTGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: RRTPPQAEAARI*LSVRRSPGCPA
Trigger: TGCTGGGCAGCCGGGCGACCGCCGAACGGAAAGCAAGATCCTCGCCGCCTCCGCTTGAGGAGGCGTGCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CAA 90 bp ATCTCCGCGCGCCGCACGCCTCCTCAAGCGGAGGCGGCGAGGATCTaGCTTTCCGTTCGGCGGTCGCCCGGCTGCCCAGCAAACCCGCTC +
Preference number: 6 (lower is better)
Translates to: ISARRTPPQAEAARI*LSVRRSPGCPANPL
Trigger: GAGCGGGTTTGCTGGGCAGCCGGGCGACCGCCGAACGGAAAGCAAGATCCTCGCCGCCTCCGCTTGAGGAGGCGTGCGGCGCGCGGAGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp GCCGCACGCCTCCTCAAGCGGAGGCGGCGAGGATCTTaGTTTCCGTTCGGCGGTCGCCCGGCTGCCCAGCAA +
Preference number: 6 (lower is better)
Translates to: AARLLKRRRRGS*FPFGGRPAAQQ
Trigger: TTGCTGGGCAGCCGGGCGACCGCCGAACGGAAAGCAAGATCCTCGCCGCCTCCGCTTGAGGAGGCGTGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 72 bp CGCCCGGCTGCCCAGCAAACCCGCTCGCAGAAAGGATaGGAAGGAAGGGGGCTAGTGCACCGAGCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: RPAAQQTRSQKG*EGRGLVHRAAA
Trigger: GGCCGCTGCTCGGTGCACTAGCCCCCTTCCTTCCCATCCTTTCTGCGAGCGGGTTTGCTGGGCAGCCGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp CGGTGCGGGAGCCCCAGCACCGACAAGATCTCCTTCTaGATCTCCCGCTTCTCCTGCGTCTTGAGCCGCCGG +
Preference number: 6 (lower is better)
Translates to: RCGSPSTDKISF*ISRFSCVLSRR
Trigger: CCGGCGGCTCAAGACGCAGGAGAAGCGGGAGATGCAGAAGGAGATCTTGTCGGTGCTGGGGCTCCCGCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CAA 72 bp TCCCCAGATCGCAGGGCCACCATGAAGTTTACCCCGTaGCAGGGCCCAGGCTGCGGCGACAAGGCGTCCCGA +
Preference number: 6 (lower is better)
Translates to: SPDRRATMKFTP*QGPGCGDKASR
Trigger: TCGGGACGCCTTGTCGCCGCAGCCTGGGCCCTGCAACGGGGTAAACTTCATGGTGGCCCTGCGATCTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp GCGAGGATCTTGCTTTCCGTTCGGCGGTCGCCCGGCTaGCCAGCAAACCCGCTCGCAGAAAGGATGGGAAGG +
Preference number: 6 (lower is better)
Translates to: ARILLSVRRSPG*PANPLAERMGR
Trigger: CCTTCCCATCCTTTCTGCGAGCGGGTTTGCTGGGCAGCCGGGCGACCGCCGAACGGAAAGCAAGATCCTCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS CCA 72 bp TCTGAAGCACTGGAGACCCGCGCCACGTCCTGGGACTaGGTAGAGCGATTACGACTCTGTTGTCGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: SEALETRATSWD*VERLRLCCRRR
Trigger: CCGGCGCCGACAACAGAGTCGTAATCGCTCTACCCAGTCCCAGGACGTGGCGCGGGTCTCCAGTGCTTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS TCA 72 bp GCGATTACGACTCTGTTGTCGGCGCCGGCTGGAGGCTaGCCTGGTGGTGCGCACGTGCACCTCACTCACTTT +
Preference number: 6 (lower is better)
Translates to: AITTLLSAPAGG*PGGAHVHLTHF
Trigger: AAAGTGAGTGAGGTGCACGTGCGCACCACCAGGTCAGCCTCCAGCCGGCGCCGACAACAGAGTCGTAATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp GCAGGGCCCAGGCTGCGGCGACAAGGCGTCCCGAAATaGCAGTCTATTCCGCGAGGTTTAACTTCCTTCTCG +
Preference number: 6 (lower is better)
Translates to: AGPRLRRQGVPK*QSIPRGLTSFS
Trigger: CGAGAAGGAAGTTAAACCTCGCGGAATAGACTGGCATTTCGGGACGCCTTGTCGCCGCAGCCTGGGCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283147.7
CDS GCA 72 bp GCCACCATGAAGTTTACCCCGTTGCAGGGCCCAGGCTaGGGCGACAAGGCGTCCCGAAATGCCAGTCTATTC +
Preference number: 6 (lower is better)
Translates to: ATMKFTPLQGPG*GDKASRNASLF
Trigger: GAATAGACTGGCATTTCGGGACGCCTTGTCGCCGCAGCCTGGGCCCTGCAACGGGGTAAACTTCATGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283147.7