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Pregenerated sensors for BMP5 (Homo sapiens)

Ensembl gene IDs: ENSG00000112175

Ensembl transcript IDs: ENST00000370830.4

Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCGGCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTaGCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTATT +
Preference number: 1 (lower is better)
Translates to: FGIFCSCTFYACSDS*LWGGKWSTCKCFFI
Trigger: AATAAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGCCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR CCA 90 bp ATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTaGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTATTTTGGAC +
Preference number: 1 (lower is better)
Translates to: IFCSCTFYACSDSCL*GGKWSTCKCFFILD
Trigger: GTCCAAAATAAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR GCA 90 bp TCCTCCAGTTTAGTTTCAGTGCTTTTACTTCTAAATAAAATCCCTTaGATCACATCAATCAGCAAACTCAGTTATAAAGGAGAGCTAAAG +
Preference number: 1 (lower is better)
Translates to: SSSLVSVLLLLNKIP*ITSISKLSYKGELK
Trigger: CTTTAGCTCTCCTTTATAACTGAGTTTGCTGATTGATGTGATGCAAGGGATTTTATTTAGAAGTAAAAGCACTGAAACTAAACTGGAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR-3UTR TCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGTGTCTCCTGAAGCTTTaGGCTCTTTGCAAAATCTAC +
Preference number: 2 (lower is better)
Translates to: ASSALVHFTHAVTLACGECLLKL*ALCKIY
Trigger: GTAGATTTTGCAAAGAGCTCAAAGCTTCAGGAGACA...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR-3UTR GCA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAAAGCCAAAAAGGAACATaGTCCTACAGTTACACCACT +
Preference number: 2 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKSQKGT*SYSYTT
Trigger: AGTGGTGTAACTGTAGGAGCATGTTCCTTTTTGGCT...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR-3UTR CCA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAACAATTAGTGTTAACTTaGAAAGCTATGGACACAGGC +
Preference number: 2 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKQLVLT*KAMDTG
Trigger: GCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTG...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR-3UTR GCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGTCAGCTTCTATGTTCTaGCTACCGTTTATTTATTCA +
Preference number: 2 (lower is better)
Translates to: ASSALVHFTHAVTLACGESASMF*LPFIYS
Trigger: TGAATAAATAAACGGTAGGCAGAACATAGAAGCTGA...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR-3UTR TCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTAATTCCCCGTTTGTCTaGAAGTATGCTTTTTATTGC +
Preference number: 2 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFNSPFV*KYAFYC
Trigger: GCAATAAAAAGCATACTTTCAGACAAACGGGGAATT...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR TCA 72 bp CGGCATCTTCTGCTCTTGTACATTTTACGCATGCAGTaGCTCTTGCCTGTGGGGAGGAAAGTGGAGCACATG +
Preference number: 3 (lower is better)
Translates to: RHLLLLYILRMQ*LLPVGRKVEHM
Trigger: CATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR GCA 72 bp TCTTTCGGCATCTTCTGCTCTTGTACATTTTACGCATaGAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGC +
Preference number: 3 (lower is better)
Translates to: SFGIFCSCTFYA*SDSCLWGGKWS
Trigger: GCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGCCGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR GCA 72 bp TTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTaGCTGTGGGGAGGAAAGTGGAGCACATGTAAATGT +
Preference number: 3 (lower is better)
Translates to: FCSCTFYACSDS*LWGGKWSTCKC
Trigger: ACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR-3UTR CAA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTACAATTAGTGTTAACTaGGAAAGCTATGGACACAGG +
Preference number: 3 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFTISVN*ESYGHR
Trigger: CCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGT...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR GCA 72 bp AGGAGAGCTAAAGAAAATGGTTCTTTCGGCATCTTCTaGTCTTGTACATTTTACGCATGCAGTGACTCTTGC +
Preference number: 3 (lower is better)
Translates to: RRAKENGSFGIF*SCTFYACSDSC
Trigger: GCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGCCGAAAGAACCATTTTCTTTAGCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR-3UTR CAA 90 bp GTTGTACTACAATTAGTGTTAACTTGGAAAGCTATGGACACAGGCTCAAGCCTGGAAGCTTTGAGCTCTTaGCAAAATCTACAATCCACA +
Preference number: 3 (lower is better)
Translates to: VVLQLVLTWKAMDTGSSLEALSS*QNLQST
Trigger: TGTGGATTGTAGATTTTGCAAAGAGCTCAAAGCTTC...CAGGCTTGAGCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGTAGTACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
3UTR GCA 72 bp TTGCAAAATCTACAATCCACAAGCCAAAAAGGAACATaGTCCTACAGTTACACCACTTCTGTTAAAGCAAAC +
Preference number: 3 (lower is better)
Translates to: LQNLQSTSQKGT*SYSYTTSVKAN
Trigger: GTTTGCTTTAACAGAAGTGGTGTAACTGTAGGAGCATGTTCCTTTTTGGCTTGTGGATTGTAGATTTTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTGAGGAGGACTCTGGGTaGTCAGAGGAGTCGTCCGAG +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFEEDSG*SEESSE
Trigger: CTCGGACGACTCCTCTGACCACCCAGAGTCCTCCTC...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGCAAGGATGCCCTTACTaGGTACTCCGACTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ASSALVHFTHAVTLACGEQGCPY*VLRLFR
Trigger: CCTGAAGAGTCGGAGTACTCAGTAAGGGCATCCTTG...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGAGTGACTCTTGCCTGTaGGGAGGAAAGTGGAGCACA +
Preference number: 4 (lower is better)
Translates to: ASSALVHFTHAVTLACGESDSCL*GGKWST
Trigger: TGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACT...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTTGGTATCATGGAGGCTaGCTAGAGGAGGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFWYHGG*LEEDSG
Trigger: CCCAGAGTCCTCCTCTAGCCAGCCTCCATGATACCA...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGATCACAGATCTATGCTaGTCTGCACCTTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ASSALVHFTHAVTLACGEITDLC*SAPWCW
Trigger: CCAACACCAAGGTGCAGATCAGCATAGATCTGTGAT...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAAAATGGTCTGGGTCTGTaGGGCAAACCCAAGATAGAG +
Preference number: 4 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKNGLGL*GKPKIE
Trigger: CTCTATCTTGGGTTTGCCTCACAGACCCAGACCATT...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGTCACTGCCTCTCCATaGGGAATTTGGGTAAGATCA +
Preference number: 4 (lower is better)
Translates to: ASSALVHFTHAVTLACGEVTASP*GIWVRS
Trigger: TGATCTTACCCAAATTCCTCATGGAGAGGCAGTGAC...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTGCTATAATCCAGTCCTaGCATCCCAGATCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFAIIQS*HPRSRK
Trigger: CTTCCGGGATCTGGGATGGCAGGACTGGATTATAGC...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGAGCGTATCCTTCTGGTaGTATAATCCAGTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ASSALVHFTHAVTLACGESVSFW*YNPVLP
Trigger: TGGCAGGACTGGATTATAGCACCAGAAGGATACGCT...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp GTTGTACTACAATTAGTGTTAACTTGGAAAGCTATGGACACAGGCTCAAGCCTGCCCATTGGGAGAGGCTaGGTATCCCTTTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: VVLQLVLTWKAMDTGSSLPIGRG*VSLSCP
Trigger: GGGGCAAGAAAGGGATACCCAGCCTCTCCCAATGGG...CAGGCTTGAGCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGTAGTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAGTTTTTGCTGCATTaGTGTAGCAGAAGACGGCTA +
Preference number: 4 (lower is better)
Translates to: ASSALVHFTHAVTLACGEEFLLH*CSRRRL
Trigger: TAGCCGTCTTCTGCTACATCAATGCAGCAAAAACTC...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTCGCTTGTTTTCCAGGTaGAAATGGTCTGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFRLFSR*KWSGSV
Trigger: CACAGACCCAGACCATTTTCACCTGGAAAACAAGCG...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGTTTTCGTTTGTTGGCTaGTCTCACGGATCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ASSALVHFTHAVTLACGEFSFVG*SHGSKK
Trigger: CTTCTTCGATCCGTGAGAGCAGCCAACAAACGAAAA...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp GTTGTACTACAATTAGTGTTAACTTGGAAAGCTATGGACACAGGCTCAAGCCTGGCATGCAGTGACTCTTaGCTGTGGGGAGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: VVLQLVLTWKAMDTGSSLACSDS*LWGGKW
Trigger: CCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGC...CAGGCTTGAGCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGTAGTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp GTTGTACTACAATTAGTGTTAACTTGGAAAGCTATGGACACAGGCTCAAGCCTGGACGAGGATACCCATTaGGAGAGGCTGGGTATCCCT +
Preference number: 4 (lower is better)
Translates to: VVLQLVLTWKAMDTGSSLDEDTH*ERLGIP
Trigger: AGGGATACCCAGCCTCTCCCAATGGGTATCCTCGTC...CAGGCTTGAGCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGTAGTACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTCAACACTGGACATTCTaGAGGAGTCCTGATGAGAGC +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFQHWTF*RSPDES
Trigger: GCTCTCATCAGGACTCCTCCAGAATGTCCAGTGTTG...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGAGCACAACAAGGCTTTaGTACGTGGTCAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: ASSALVHFTHAVTLACGESTTRL*YVVRKH
Trigger: ATGTTTCCTGACCACGTACCAAAGCCTTGTTGTGCT...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAAGATTGCTGGTCACAGTaGTATCAAAGACAAGCCAAC +
Preference number: 4 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKDCWSQ*YQRQAN
Trigger: GTTGGCTTGTCTTTGATATCACTGTGACCAGCAATC...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTATTTTACGCATGCAGTaGCTCTTGCCTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHNRTFLFGIICAILRMQ*LLPVGR
Trigger: CCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAAT...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTTGGGTATCCCTTTCTTaGCCCTCTGGTCTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHNRTFLFGIICAWVSLS*PSGLFC
Trigger: GCAGAAGAGACCAGAGGGGCAAGAAAGGGATACCCA...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTTTCAGCTGCTGTCACTaGCTCTCCATGAGGAATTTG +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFFSCCH*LSMRNL
Trigger: CAAATTCCTCATGGAGAGGCAGTGACAGCAGCTGAA...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGTTTCAAATCGGTTGTTaGTCCGGTCCTTGTATATCC +
Preference number: 4 (lower is better)
Translates to: ASSALVHFTHAVTLACGEFQIGC*SGPCIS
Trigger: GGATATACAAGGACCGGAGCAACAACCGATTTGAAA...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTAGAAAGTTGGTATCATaGAGGCTGGCTAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFRKLVS*RLARGG
Trigger: TCCTCCTCTAGCCAGCCTCCATGATACCAACTTTCT...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTTGCAGCGTATCCTTCTaGTGCTATAATCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFCSVSF*CYNPVL
Trigger: CAGGACTGGATTATAGCACCAGAAGGATACGCTGCA...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTCAGCAGATTTTACGTTaGTACTGCGTCCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHNRTFLFGIICAQQILR*YCVHPL
Trigger: CAGGGGATGGACGCAGTATCAACGTAAAATCTGCTG...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTTTAGTGGCAGCCACATaGGCGTACTACCATATTTCT +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFLVAAT*AYYHIS
Trigger: AGAAATATGGTAGTACGCTCATGTGGCTGCCACTAA...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGAGATCTATGCTGATCTaGACCTTGGTGTTGGAATAT +
Preference number: 4 (lower is better)
Translates to: ASSALVHFTHAVTLACGERSMLI*TLVLEY
Trigger: ATATTCCAACACCAAGGTGCAGATCAGCATAGATCT...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATCCATCACAATAAAATaGAGCGTATCCTTCTGGTGC +
Preference number: 4 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKSITIK*SVSFWC
Trigger: GCACCAGAAGGATACGCTGCATTTTATTGTGATGGA...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTTGTACATTTTACGCATaGAGTGACTCTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFCTFYA*SDSCLW
Trigger: CCACAGGCAAGAGTCACTGCATGCGTAAAATGTACA...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTCAGGTGAAAATGGTCTaGGTCTGTGAGGCAAACCCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHNRTFLFGIICAQVKMV*VCEANP
Trigger: TGGGTTTGCCTCACAGACCCAGACCATTTTCACCTG...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTCTGTGGGGAGGAAAGTaGAGCACATGTAAATGTTTC +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFLWGGK*STCKCF
Trigger: GAAACATTTACATGTGCTCCACTTTCCTCCCCACAG...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATTCCCTGAATTTACTTaGAATCCTTCCTGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKFPEFT*NPSCKS
Trigger: GGACTTACAGGAAGGATTTCAAGTAAATTCAGGGAA...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTAATGGTTGTTTTGACTaGGGTCCCTGTCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHNRTFLFGIICANGCFD*GPCLPT
Trigger: TGTGGGAAGACAGGGACCTCAGTCAAAACAACCATT...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGGTATACGTTTGGTTTaGAAGATCCAAAAGGATGAT +
Preference number: 4 (lower is better)
Translates to: ASSALVHFTHAVTLACGEGIRLV*KIQKDD
Trigger: ATCATCCTTTTGGATCTTTCAAACCAAACGTATACC...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp GTTGTACTACAATTAGTGTTAACTTGGAAAGCTATGGACACAGGCTCAAGCCTGCAGCATAAAGAGAGGTaGAGAGGACGCTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VVLQLVLTWKAMDTGSSLQHKER*RGRLFS
Trigger: GGAAAACAAGCGTCCTCTGCACCTCTCTTTATGCTG...CAGGCTTGAGCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGTAGTACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp GTTGTACTACAATTAGTGTTAACTTGGAAAGCTATGGACACAGGCTCAAGCCTGTCCGAGATAACTGTATaGGACGAGGATACCCATTGG +
Preference number: 4 (lower is better)
Translates to: VVLQLVLTWKAMDTGSSLSEITV*DEDTHW
Trigger: CCAATGGGTATCCTCGTCGCATACAGTTATCTCGGA...CAGGCTTGAGCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGTAGTACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTCATCATTCAGAAAGTTaGTATCATGGAGGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFHHSES*YHGGWL
Trigger: TAGCCAGCCTCCATGATACCAACTTTCTGAATGATG...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAAAGTCCTGATGAGAGCTaGATTTATTGCGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKSPDES*IYCGFD
Trigger: ATCAAAACCGCAATAAATCCAGCTCTCATCAGGACT...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAAAATTCCCCGTTTGTCTaGAAGTATGCTTTTTATTGC +
Preference number: 4 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKNSPFV*KYAFYC
Trigger: GCAATAAAAAGCATACTTTCAGACAAACGGGGAATT...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAAGTTAAGAGTTTTTGCTaGATTGATGTAGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKVKSFC*IDVAED
Trigger: GTCTTCTGCTACATCAATGCAGCAAAAACTCTTAAC...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTTCTTTCGGCATCTTCTaGTCTTGTACATTTTACGCA +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFSFGIF*SCTFYA
Trigger: TGCGTAAAATGTACAAGAGCAGAAGATGCCGAAAGA...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTTTTCTTCATTGGTCATaGCATTGTAGAGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFFLHWS*HCRDPA
Trigger: TGCTGGATCTCTACAATGCCATGACCAATGAAGAAA...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTCCCACATCTAAAGCTTaGGCCTTTCTTGTGTCTAAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHNRTFLFGIICAPTSKA*AFLVSN
Trigger: GTTAGACACAAGAAAGGCCCAAGCTTTAGATGTGGG...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTCATATGGGCGTTAAGTaGAAAAGAACATTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFHMGVK*KRTFSI
Trigger: GATGGAGAATGTTCTTTTCCACTTAACGCCCATATG...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTTTGGTGGCATTCATATaGGCGTTAAGTGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFLVAFI*ALSGKE
Trigger: TTCTTTTCCACTTAACGCCCATATGAATGCCACCAA...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTGGATTAATCACCCAATaGTTGCTGGTCACAGTGATA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHNRTFLFGIICAGLITQ*LLVTVI
Trigger: TATCACTGTGACCAGCAATCATTGGGTGATTAATCC...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR TCA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTTGTCTCCTGAAGCTTTaGGCTCTTTGCAAAATCTAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHNRTFLFGIICACLLKL*ALCKIY
Trigger: GTAGATTTTGCAAAGAGCTCAAAGCTTCAGGAGACA...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTTATAATCTCCAACACTaGACATTCTGGAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHNRTFLFGIICAYNLQH*TFWRSP
Trigger: AGGACTCCTCCAGAATGTCCAGTGTTGGAGATTATA...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTAGTACAGAACAGAGATaGCATTTAATTTGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFSTEQR*HLIWLE
Trigger: CTCCAACCAAATTAAATGCCATCTCTGTTCTGTACT...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTGTTGTTAAGAGTTTTTaGTGCATTGATGTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFVVKSF*CIDVAE
Trigger: TTCTGCTACATCAATGCAGCAAAAACTCTTAACAAC...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp GTTGTACTACAATTAGTGTTAACTTGGAAAGCTATGGACACAGGCTCAAGCCTGCAATTAGTGTTAACTTaGAAAGCTATGGACACAGGC +
Preference number: 4 (lower is better)
Translates to: VVLQLVLTWKAMDTGSSLQLVLT*KAMDTG
Trigger: GCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTG...CAGGCTTGAGCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGTAGTACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CCA 90 bp GTTGTACTACAATTAGTGTTAACTTGGAAAGCTATGGACACAGGCTCAAGCCTGCAGAACCTTCCTGTTTaGAATTATTTGTGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: VVLQLVLTWKAMDTGSSLQNLPV*NYLCLE
Trigger: TTCCAAGCACAAATAATTCCAAACAGGAAGGTTCTG...CAGGCTTGAGCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGTAGTACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR GCA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTTCAGCTTCTATGTTCTaGCTACCGTTTATTTATTCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHNRTFLFGIICASASMF*LPFIYS
Trigger: TGAATAAATAAACGGTAGGCAGAACATAGAAGCTGA...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS GCA 90 bp GAGGAGGACTCTGGGTGGTCAGAGGAGTCGTCCGAGATAACTGTATaGGACGAGGATACCCATTGGGAGAGGCTGGGTATCCCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: EEDSGWSEESSEITV*DEDTHWERLGIPFL
Trigger: CAAGAAAGGGATACCCAGCCTCTCCCAATGGGTATCCTCGTCGCATACAGTTATCTCGGACGACTCCTCTGACCACCCAGAGTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CCA 90 bp TCAGAGGAGTCGTCCGAGATAACTGTATGCGACGAGGATACCCATTaGGAGAGGCTGGGTATCCCTTTCTTGCCCCTCTGGTCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: SEESSEITVCDEDTH*ERLGIPFLPLWSLL
Trigger: CAGAAGAGACCAGAGGGGCAAGAAAGGGATACCCAGCCTCTCCCAATGGGTATCCTCGTCGCATACAGTTATCTCGGACGACTCCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAACGACGAGGATACCCATaGGGAGAGGCTGGGTATCCC +
Preference number: 5 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKRRGYP*GEAGYP
Trigger: GGGATACCCAGCCTCTCCCAATGGGTATCCTCGTCG...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGCCAGCAGATTTTACGTaGATACTGCGTCCATCCCCT +
Preference number: 5 (lower is better)
Translates to: ASSALVHFTHAVTLACGEPADFT*ILRPSP
Trigger: AGGGGATGGACGCAGTATCAACGTAAAATCTGCTGG...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS TCA 90 bp TCCCTTTCTTGCCCCTCTGGTCTCTTCTGCCAAGGATGCCCTTACTaGGTACTCCGACTCTTCAGGATTTTCTTCATTGGTCATGGCATT +
Preference number: 5 (lower is better)
Translates to: SLSCPSGLFCQGCPY*VLRLFRIFFIGHGI
Trigger: AATGCCATGACCAATGAAGAAAATCCTGAAGAGTCGGAGTACTCAGTAAGGGCATCCTTGGCAGAAGAGACCAGAGGGGCAAGAAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAACTCCCAAACCTCCTTTaGCATAACCCACTAGAACCC +
Preference number: 5 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKLPNLL*HNPLEP
Trigger: GGGTTCTAGTGGGTTATGCAAAAGGAGGTTTGGGAG...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGCATCATTCAGAAAGTaGGTATCATGGAGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ASSALVHFTHAVTLACGEASFRK*VSWRLA
Trigger: AGCCAGCCTCCATGATACCAACTTTCTGAATGATGC...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS TCA 90 bp GAGATCCAGCATAAAGAGAGGTGCAGAGGACGCTTGTTTTCCAGGTaGAAATGGTCTGGGTCTGTGAGGCAAACCCAAGATAGAGAGAAT +
Preference number: 5 (lower is better)
Translates to: EIQHKERCRGRLFSR*KWSGSVRQTQDREN
Trigger: ATTCTCTCTATCTTGGGTTTGCCTCACAGACCCAGACCATTTTCACCTGGAAAACAAGCGTCCTCTGCACCTCTCTTTATGCTGGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGATCTGCACCTTGGTGTaGGAATATATATCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: ASSALVHFTHAVTLACGEICTLV*EYISVR
Trigger: CCGGACAGATATATATTCCAACACCAAGGTGCAGAT...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp GTTGTACTACAATTAGTGTTAACTTGGAAAGCTATGGACACAGGCTCAAGCCTGCTGGGTATCCCTTTCTaGCCCCTCTGGTCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: VVLQLVLTWKAMDTGSSLLGIPF*PLWSLL
Trigger: CAGAAGAGACCAGAGGGGCAAGAAAGGGATACCCAG...CAGGCTTGAGCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGTAGTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTCGGCATCTTCTGCTCTaGTACATTTTACGCATGCAG +
Preference number: 5 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFRHLLL*YILRMQ
Trigger: CTGCATGCGTAAAATGTACAAGAGCAGAAGATGCCG...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGTCTCTTTCAACTAAGTaGACAAAGCTCATGACCATG +
Preference number: 5 (lower is better)
Translates to: ASSALVHFTHAVTLACGESLSTK*TKLMTM
Trigger: CATGGTCATGAGCTTTGTCAACTTAGTTGAAAGAGA...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAAAAGCTTGGGCCTTTCTaGTGTCTAACAAGAACAGAT +
Preference number: 5 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKKLGPF*CLTRTD
Trigger: ATCTGTTCTTGTTAGACACAAGAAAGGCCCAAGCTT...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTGAGCACAACAAGGCTTaGGTACGTGGTCAGGAAACA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHNRTFLFGIICAEHNKA*VRGQET
Trigger: TGTTTCCTGACCACGTACCAAAGCCTTGTTGTGCTC...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAGCTTTGAGCTCTTaGCAAAATCTACAATCCACA +
Preference number: 5 (lower is better)
Translates to: ASSALVHFTHAVTLACGEEALSS*QNLQST
Trigger: TGTGGATTGTAGATTTTGCAAAGAGCTCAAAGCTTC...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS TCA 90 bp GCACAGAGCTGTAAGCCCAAATTATTCTGGGGATTAATCACCCAATaGTTGCTGGTCACAGTGATATCAAAGACAAGCCAACCCACATCT +
Preference number: 5 (lower is better)
Translates to: AQSCKPKLFWGLITQ*LLVTVISKTSQPTS
Trigger: AGATGTGGGTTGGCTTGTCTTTGATATCACTGTGACCAGCAATCATTGGGTGATTAATCCCCAGAATAATTTGGGCTTACAGCTCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTTTGTTGCTCCGGTCCTaGTATATCCGGAATTCAGCT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHNRTFLFGIICALLLRS*YIRNSA
Trigger: AGCTGAATTCCGGATATACAAGGACCGGAGCAACAA...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTTCATTTTCAAATCGGTaGTTGCTCCGGTCCTTGTAT +
Preference number: 5 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFSFSNR*LLRSLY
Trigger: ATACAAGGACCGGAGCAACAACCGATTTGAAAATGA...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp GCATCTTCTGCTCTTGTACATTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGCTTACAGGCTTGTTTTaGCTCACTTGTGTTATAATC +
Preference number: 5 (lower is better)
Translates to: ASSALVHFTHAVTLACGELTGLF*LTCVII
Trigger: GATTATAACACAAGTGAGCAAAAACAAGCCTGTAAG...CTCCCCACAGGCAAGAGTCACTGCATGCGTAAAATGTACAAGAGCAGAAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTTGGCATTTAATTTGGTaGGAGCACAACAAGGCTTTG +
Preference number: 5 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFWHLIW*EHNKAL
Trigger: CAAAGCCTTGTTGTGCTCCAACCAAATTAAATGCCA...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp TTTTACGCATGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAAACAGAACCTTCCTGTTaGGAATTATTTGTGCTTGGA +
Preference number: 5 (lower is better)
Translates to: FYACSDSCLWGGKWSTCKTEPSC*ELFVLG
Trigger: TCCAAGCACAAATAATTCCAAACAGGAAGGTTCTGT...TTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCATGCGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CCA 90 bp CTGGTCACAGTGATATCAAAGACAAGCCAACCCACATCTAAAGCTTaGGCCTTTCTTGTGTCTAACAAGAACAGATCTGCATCCCTATTT +
Preference number: 5 (lower is better)
Translates to: LVTVISKTSQPTSKA*AFLVSNKNRSASLF
Trigger: AAATAGGGATGCAGATCTGTTCTTGTTAGACACAAGAAAGGCCCAAGCTTTAGATGTGGGTTGGCTTGTCTTTGATATCACTGTGACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTTTTTCAAATCGGTTGTaGCTCCGGTCCTTGTATATC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHNRTFLFGIICAFSNRL*LRSLYI
Trigger: GATATACAAGGACCGGAGCAACAACCGATTTGAAAA...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTGTGCTTCTTACAGGCTaGTTTTTGCTCACTTGTGTT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHNRTFLFGIICAVLLTG*FLLTCV
Trigger: AACACAAGTGAGCAAAAACAAGCCTGTAAGAAGCAC...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp GTTGTACTACAATTAGTGTTAACTTGGAAAGCTATGGACACAGGCTCAAGCCTGGCCATTCTGGGACTTTaGGTAATTTCCTCCAGTTTA +
Preference number: 5 (lower is better)
Translates to: VVLQLVLTWKAMDTGSSLAILGL*VISSSL
Trigger: TAAACTGGAGGAAATTACCAAAAGTCCCAGAATGGC...CAGGCTTGAGCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGTAGTACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp TGCAGTGACTCTTGCCTGTGGGGAGGAAAGTGGAGCACATGTAAATGTTTCTTTCCTGTTTGGAATTATTaGTGCTTGGAAGAAGGTTTA +
Preference number: 5 (lower is better)
Translates to: CSDSCLWGGKWSTCKCFFPVWNY*CLEEGL
Trigger: TAAACCTTCTTCCAAGCACAAATAATTCCAAACAGG...AAAGAAACATTTACATGTGCTCCACTTTCCTCCCCACAGGCAAGAGTCACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS TCA 90 bp CTTTTGAGTTCTTCTCAACCCTTGAGCTCTTTCCAAAACAAATCCTaGTTTCTGAATCACAGATCTATGCTGATCTGCACCTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: LLSSSQPLSSFQNKS*FLNHRSMLICTLVL
Trigger: CAACACCAAGGTGCAGATCAGCATAGATCTGTGATTCAGAAATCAGGATTTGTTTTGGAAAGAGCTCAAGGGTTGAGAAGAACTCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp GTTGTACTACAATTAGTGTTAACTTGGAAAGCTATGGACACAGGCTCAAGCCTGATGCTGATCTGCACCTaGGTGTTGGAATATATATCT +
Preference number: 5 (lower is better)
Translates to: VVLQLVLTWKAMDTGSSLMLICT*VLEYIS
Trigger: AGATATATATTCCAACACCAAGGTGCAGATCAGCAT...CAGGCTTGAGCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGTAGTACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp GTTGTACTACAATTAGTGTTAACTTGGAAAGCTATGGACACAGGCTCAAGCCTGCTCTCCATGAGGAATTaGGGTAAGATCAAATCGAAA +
Preference number: 5 (lower is better)
Translates to: VVLQLVLTWKAMDTGSSLLSMRN*GKIKSK
Trigger: TTTCGATTTGATCTTACCCAAATTCCTCATGGAGAG...CAGGCTTGAGCCTGTGTCCATAGCTTTCCAAGTTAACACTAATTGTAGTACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS-3UTR CAA 90 bp CACACACACACACACACACACAACAGAACCTTCCTGTTTGGAATTATTTGTGCTCTTGTTTTTGCTCACTaGTGTTATAATCTCCAACAC +
Preference number: 5 (lower is better)
Translates to: HTHTHTHNRTFLFGIICALVFAH*CYNLQH
Trigger: GTGTTGGAGATTATAACACAAGTGAGCAAAAACAAG...AGCACAAATAATTCCAAACAGGAAGGTTCTGTTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS GCA 72 bp AGGATACCCATTGGGAGAGGCTGGGTATCCCTTTCTTaGCCCTCTGGTCTCTTCTGCCAAGGATGCCCTTAC +
Preference number: 6 (lower is better)
Translates to: RIPIGRGWVSLS*PSGLFCQGCPY
Trigger: GTAAGGGCATCCTTGGCAGAAGAGACCAGAGGGGCAAGAAAGGGATACCCAGCCTCTCCCAATGGGTATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS GCA 72 bp TCTGGGTGGTCAGAGGAGTCGTCCGAGATAACTGTATaGGACGAGGATACCCATTGGGAGAGGCTGGGTATC +
Preference number: 6 (lower is better)
Translates to: SGWSEESSEITV*DEDTHWERLGI
Trigger: GATACCCAGCCTCTCCCAATGGGTATCCTCGTCGCATACAGTTATCTCGGACGACTCCTCTGACCACCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CCA 72 bp TCGTCCGAGATAACTGTATGCGACGAGGATACCCATTaGGAGAGGCTGGGTATCCCTTTCTTGCCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: SSEITVCDEDTH*ERLGIPFLPLW
Trigger: CCAGAGGGGCAAGAAAGGGATACCCAGCCTCTCCCAATGGGTATCCTCGTCGCATACAGTTATCTCGGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CAA 72 bp GTCGTCCGAGATAACTGTATGCGACGAGGATACCCATaGGGAGAGGCTGGGTATCCCTTTCTTGCCCCTCTG +
Preference number: 6 (lower is better)
Translates to: VVRDNCMRRGYP*GEAGYPFLAPL
Trigger: CAGAGGGGCAAGAAAGGGATACCCAGCCTCTCCCAATGGGTATCCTCGTCGCATACAGTTATCTCGGACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CAA 90 bp GTATGCGACGAGGATACCCATTGGGAGAGGCTGGGTATCCCTTTCTaGCCCCTCTGGTCTCTTCTGCCAAGGATGCCCTTACTGAGTACT +
Preference number: 6 (lower is better)
Translates to: VCDEDTHWERLGIPF*PLWSLLPRMPLLST
Trigger: AGTACTCAGTAAGGGCATCCTTGGCAGAAGAGACCAGAGGGGCAAGAAAGGGATACCCAGCCTCTCCCAATGGGTATCCTCGTCGCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CAA 90 bp GTCAGAGGAGTCGTCCGAGATAACTGTATGCGACGAGGATACCCATaGGGAGAGGCTGGGTATCCCTTTCTTGCCCCTCTGGTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: VRGVVRDNCMRRGYP*GEAGYPFLAPLVSS
Trigger: AGAAGAGACCAGAGGGGCAAGAAAGGGATACCCAGCCTCTCCCAATGGGTATCCTCGTCGCATACAGTTATCTCGGACGACTCCTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CCA 72 bp TGTCAGCATCATTCAGAAAGTTGGTATCATGGAGGCTaGCTAGAGGAGGACTCTGGGTGGTCAGAGGAGTCG +
Preference number: 6 (lower is better)
Translates to: CQHHSESWYHGG*LEEDSGWSEES
Trigger: CGACTCCTCTGACCACCCAGAGTCCTCCTCTAGCCAGCCTCCATGATACCAACTTTCTGAATGATGCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CAA 72 bp GGTCCCTGTCTTCCCACAAGACCAGCAGATTTTACGTaGATACTGCGTCCATCCCCTGTTTCTGCACAGAGC +
Preference number: 6 (lower is better)
Translates to: GPCLPTRPADFT*ILRPSPVSAQS
Trigger: GCTCTGTGCAGAAACAGGGGATGGACGCAGTATCAACGTAAAATCTGCTGGTCTTGTGGGAAGACAGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS TCA 72 bp TGCCCCTCTGGTCTCTTCTGCCAAGGATGCCCTTACTaGGTACTCCGACTCTTCAGGATTTTCTTCATTGGT +
Preference number: 6 (lower is better)
Translates to: CPSGLFCQGCPY*VLRLFRIFFIG
Trigger: ACCAATGAAGAAAATCCTGAAGAGTCGGAGTACTCAGTAAGGGCATCCTTGGCAGAAGAGACCAGAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS GCA 72 bp GTTGTTGCTCCGGTCCTTGTATATCCGGAATTCAGCTaGTGTCACTGCCTCTCCATGAGGAATTTGGGTAAG +
Preference number: 6 (lower is better)
Translates to: VVAPVLVYPEFS*CHCLSMRNLGK
Trigger: CTTACCCAAATTCCTCATGGAGAGGCAGTGACAGCAGCTGAATTCCGGATATACAAGGACCGGAGCAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS TCA 72 bp CATAAAGAGAGGTGCAGAGGACGCTTGTTTTCCAGGTaGAAATGGTCTGGGTCTGTGAGGCAAACCCAAGAT +
Preference number: 6 (lower is better)
Translates to: HKERCRGRLFSR*KWSGSVRQTQD
Trigger: ATCTTGGGTTTGCCTCACAGACCCAGACCATTTTCACCTGGAAAACAAGCGTCCTCTGCACCTCTCTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CAA 72 bp CTGAATCACAGATCTATGCTGATCTGCACCTTGGTGTaGGAATATATATCTGTCCGGCAGCTTGGTGATAAC +
Preference number: 6 (lower is better)
Translates to: LNHRSMLICTLV*EYISVRQLGDN
Trigger: GTTATCACCAAGCTGCCGGACAGATATATATTCCAACACCAAGGTGCAGATCAGCATAGATCTGTGATTCAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CCA 72 bp GTGATATCAAAGACAAGCCAACCCACATCTAAAGCTTaGGCCTTTCTTGTGTCTAACAAGAACAGATCTGCA +
Preference number: 6 (lower is better)
Translates to: VISKTSQPTSKA*AFLVSNKNRSA
Trigger: TGCAGATCTGTTCTTGTTAGACACAAGAAAGGCCCAAGCTTTAGATGTGGGTTGGCTTGTCTTTGATATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CAA 72 bp GAATTCAGCTGCTGTCACTGCCTCTCCATGAGGAATTaGGGTAAGATCAAATCGAAATTCTTTGTAATGCCT +
Preference number: 6 (lower is better)
Translates to: EFSCCHCLSMRN*GKIKSKFFVMP
Trigger: AGGCATTACAAAGAATTTCGATTTGATCTTACCCAAATTCCTCATGGAGAGGCAGTGACAGCAGCTGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS TCA 72 bp TGTAAGCCCAAATTATTCTGGGGATTAATCACCCAATaGTTGCTGGTCACAGTGATATCAAAGACAAGCCAA +
Preference number: 6 (lower is better)
Translates to: CKPKLFWGLITQ*LLVTVISKTSQ
Trigger: TTGGCTTGTCTTTGATATCACTGTGACCAGCAATCATTGGGTGATTAATCCCCAGAATAATTTGGGCTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CAA 72 bp ATAAACTGTAGTTCCCAAAGTAATCTTCACTTGCTTTaGAGTTCTTCTCAACCCTTGAGCTCTTTCCAAAAC +
Preference number: 6 (lower is better)
Translates to: INCSSQSNLHLL*SSSQPLSSFQN
Trigger: GTTTTGGAAAGAGCTCAAGGGTTGAGAAGAACTCAAAAGCAAGTGAAGATTACTTTGGGAACTACAGTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370830.4
CDS CAA 90 bp AAAGTTGATCTTCTGATAAACTGTAGTTCCCAAAGTAATCTTCACTaGCTTTTGAGTTCTTCTCAACCCTTGAGCTCTTTCCAAAACAAA +
Preference number: 6 (lower is better)
Translates to: KVDLLINCSSQSNLH*LLSSSQPLSSFQNK
Trigger: TTTGTTTTGGAAAGAGCTCAAGGGTTGAGAAGAACTCAAAAGCAAGTGAAGATTACTTTGGGAACTACAGTTTATCAGAAGATCAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370830.4