RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BMP2K (Homo sapiens)

Ensembl gene IDs: ENSG00000138756

Ensembl transcript IDs: ENST00000389010.7, ENST00000502613.3, ENST00000502871.5, ENST00000505725.1

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGGTTACCGAATTCACCAGGAGCAAGGACTTTAACAGGTGTTGCTaGACTTTGAATGGTCAGCACACTGGGAGTGGCAGTAGTAGCAGA +
Preference number: 1 (lower is better)
Translates to: MVTEFTRSKDFNRCC*TLNGQHTGSGSSSR
Trigger: TCTGCTACTACTGCCACTCCCAGTGTGCTGACCATTCAAAGTTCAGCAACACCTGTTAAAGTCCTTGCTCCTGGTGAATTCGGTAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR CCA 90 bp CTTTATCAGCAACTGACCTATTGGCACTATAGGAGGAGTCCATTATaGTTCCAACCTGAGCTGGAAGTGATGAAGTGTAGGAAACTAAGG +
Preference number: 1 (lower is better)
Translates to: LYQQLTYWHYRRSPL*FQPELEVMKCRKLR
Trigger: CCTTAGTTTCCTACACTTCATCACTTCCAGCTCAGGTTGGAACCATAATGGACTCCTCCTATAGTGCCAATAGGTCAGTTGCTGATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR TCA 90 bp AAAGGATTCCACCCTGACATATCAGGTGGATTGCTGATGTTCTTCTaGTTTGTGAAATTTGCAATGGCCTCTTTATCAGCAACTGACCTA +
Preference number: 1 (lower is better)
Translates to: KGFHPDISGGLLMFF*FVKFAMASLSATDL
Trigger: TAGGTCAGTTGCTGATAAAGAGGCCATTGCAAATTTCACAAATCAGAAGAACATCAGCAATCCACCTGATATGTCAGGGTGGAATCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR TCA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCTTGTCTTGGTGCAATTaGGGTTTCTGTTGGTCCAAT +
Preference number: 2 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVLSWCN*GFCWSN
Trigger: ATTGGACCAACAGAAACCTCAATTGCACCAAGACAA...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR CCA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCTGGTATCTGTTATTCTaGCTTTTATTTGGCTTTTCC +
Preference number: 2 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVWYLLF*LLFGFS
Trigger: GGAAAAGCCAAATAAAAGCCAGAATAACAGATACCA...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR CCA 90 bp GCGGCTGCTGAGGAGGTCCCTGACCCAATAAAATTTCAGGGCCATTTCCAGGTCTTTCTGTTGGTCCAATaGTATCTGTTATTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: AAAEEVPDPIKFQGHFQVFLLVQ*YLLFWL
Trigger: AAGCCAGAATAACAGATACCATTGGACCAACAGAAA...GACCTGGAAATGGCCCTGAAATTTTATTGGGTCAGGGACCTCCTCAGCAGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR TCA 90 bp AATAAGCCTTCAAGTGTCCCTTACTTGATCTTAGAAGGTCAAATTCTCTGTCCAGGTGTTGCTGAACTTTaGATGGTCAGCACACTGGGA +
Preference number: 2 (lower is better)
Translates to: NKPSSVPYLILEGQILCPGVAEL*MVSTLG
Trigger: TCCCAGTGTGCTGACCATTCAAAGTTCAGCAACACC...TGGACAGAGAATTTGACCTTCTAAGATCAAGTAAGGGACACTTGAAGGCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR TCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGGAGCCAAACTTTTATTaGGTGCTGTGTGCCAGGTAC +
Preference number: 2 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKEPNFY*VLCARY
Trigger: GTACCTGGCACACAGCACTCAATAAAAGTTTGGCTC...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
3UTR-3UTR TCA 90 bp AATAAGCCTTCAAGTGTCCCTTACTTGATCTTAGAAGGTCAAATTCTCTGTCCAATTATGGTTCCAACCTaGGCTGGAAGTGATGAAGTG +
Preference number: 2 (lower is better)
Translates to: NKPSSVPYLILEGQILCPIMVPT*AGSDEV
Trigger: CACTTCATCACTTCCAGCTCAGGTTGGAACCATAAT...TGGACAGAGAATTTGACCTTCTAAGATCAAGTAAGGGACACTTGAAGGCTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR GCA 90 bp AATAAGCCTTCAAGTGTCCCTTACTTGATCTTAGAAGGTCAAATTCTCTGTCCAAATCTCCAATCTCCCTaGTGTAGTTGCTGGAGTACT +
Preference number: 2 (lower is better)
Translates to: NKPSSVPYLILEGQILCPNLQSP*CSCWST
Trigger: AGTACTCCAGCAACTACAGCAGGGAGATTGGAGATT...TGGACAGAGAATTTGACCTTCTAAGATCAAGTAAGGGACACTTGAAGGCTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR GCA 90 bp AATAAGCCTTCAAGTGTCCCTTACTTGATCTTAGAAGGTCAAATTCTCTGTCCATGCTGTAAATGGAGTTaGTGTAATCTCCAATCTCCC +
Preference number: 2 (lower is better)
Translates to: NKPSSVPYLILEGQILCPCCKWS*CNLQSP
Trigger: GGGAGATTGGAGATTACAGCAACTCCATTTACAGCA...TGGACAGAGAATTTGACCTTCTAAGATCAAGTAAGGGACACTTGAAGGCTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR GCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTAGGTGCAAACATATTTaGCTTTGGCACGAGGACAAG +
Preference number: 2 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSRCKHI*LWHEDK
Trigger: CTTGTCCTCGTGCCAAAGGCAAATATGTTTGCACCT...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
3UTR-3UTR GCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGTACTCCTTAGGAAAATaGCTCTACTACAACACAAAG +
Preference number: 2 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKYSLGK*LYYNTK
Trigger: CTTTGTGTTGTAGTAGAGGCATTTTCCTAAGGAGTA...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
3UTR-3UTR GCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTCAAACTTTTATTGAGTaGTGTGTGCCAGGTACTGTG +
Preference number: 2 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSQTFIE*CVPGTV
Trigger: CACAGTACCTGGCACACAGCACTCAATAAAAGTTTG...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
3UTR-3UTR TCA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAATGTGTGGCGAAGCTTaGCATATATTAGGTAGTTCA +
Preference number: 2 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKMCGEA*HILGSS
Trigger: TGAACTACCTAATATATGTCAAGCTTCGCCACACAT...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000502871.5
3UTR-3UTR CAA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCCAATTGAGGTTTCTGTaGGTCCAATGGTATCTGTTA +
Preference number: 3 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVQLRFL*VQWYLL
Trigger: TAACAGATACCATTGGACCAACAGAAACCTCAATTG...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR GCA 72 bp ACTTGTTTTGTGTGCACACCTGCACACACATGCGCGTaGACACACACACACACACACAAAGCCTCAGAAACC +
Preference number: 3 (lower is better)
Translates to: TCFVCTPAHTCA*THTHTHKASET
Trigger: GGTTTCTGAGGCTTTGTGTGTGTGTGTGTGTGTGCACGCGCATGTGTGTGCAGGTGTGCACACAAAACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502871.5
3UTR TCA 72 bp GAATTCACCAGGAGCAAGGACTTTAACAGGTGTTGCTaGACTTTGAATGGTCAGCACACTGGGAGTGGCAGT +
Preference number: 3 (lower is better)
Translates to: EFTRSKDFNRCC*TLNGQHTGSGS
Trigger: ACTGCCACTCCCAGTGTGCTGACCATTCAAAGTTCAGCAACACCTGTTAAAGTCCTTGCTCCTGGTGAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR GCA 72 bp TGCTGTAAATGGAGTTGCTGTAATCTCCAATCTCCCTaGTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGC +
Preference number: 3 (lower is better)
Translates to: CCKWSCCNLQSP*CSCWSTLCCCG
Trigger: GCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGGGAGATTGGAGATTACAGCAACTCCATTTACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR CCA 72 bp CAACTGACCTATTGGCACTATAGGAGGAGTCCATTATaGTTCCAACCTGAGCTGGAAGTGATGAAGTGTAGG +
Preference number: 3 (lower is better)
Translates to: QLTYWHYRRSPL*FQPELEVMKCR
Trigger: CCTACACTTCATCACTTCCAGCTCAGGTTGGAACCATAATGGACTCCTCCTATAGTGCCAATAGGTCAGTTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR CAA 90 bp TATCAGCAACTGACCTATTGGCACTATAGGAGGAGTCCATTATGGTTCCAACCTTCTGTTGCTGCTGTGTaGCATGTTGATACTGCTGCA +
Preference number: 3 (lower is better)
Translates to: YQQLTYWHYRRSPLWFQPSVAAV*HVDTAA
Trigger: TGCAGCAGTATCAACATGCAACACAGCAGCAACAGA...AGGTTGGAACCATAATGGACTCCTCCTATAGTGCCAATAGGTCAGTTGCTGATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR CAA 90 bp TATCAGCAACTGACCTATTGGCACTATAGGAGGAGTCCATTATGGTTCCAACCTTATTCTGGCTTTTATTaGGCTTTTCCTAGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: YQQLTYWHYRRSPLWFQPYSGFY*AFPSSC
Trigger: GCAGCTGCTAGGAAAAGCCAAATAAAAGCCAGAATA...AGGTTGGAACCATAATGGACTCCTCCTATAGTGCCAATAGGTCAGTTGCTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR CAA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAAGAGCCAAACTTTTATaGAGTGCTGTGTGCCAGGTA +
Preference number: 3 (lower is better)
Translates to: IPNTYTGIGVRENNYTPERAKLL*SAVCQV
Trigger: TACCTGGCACACAGCACTCAATAAAAGTTTGGCTCT...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502613.3
3UTR TCA 72 bp CACCCTGACATATCAGGTGGATTGCTGATGTTCTTCTaGTTTGTGAAATTTGCAATGGCCTCTTTATCAGCA +
Preference number: 3 (lower is better)
Translates to: HPDISGGLLMFF*FVKFAMASLSA
Trigger: TGCTGATAAAGAGGCCATTGCAAATTTCACAAATCAGAAGAACATCAGCAATCCACCTGATATGTCAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR CAA 90 bp AATAAGCCTTCAAGTGTCCCTTACTTGATCTTAGAAGGTCAAATTCTCTGTCCACTGCTGTGTTGCATGTaGATACTGCTGCATATAAGC +
Preference number: 3 (lower is better)
Translates to: NKPSSVPYLILEGQILCPLLCCM*ILLHIS
Trigger: GCTTATATGCAGCAGTATCAACATGCAACACAGCAG...TGGACAGAGAATTTGACCTTCTAAGATCAAGTAAGGGACACTTGAAGGCTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
3UTR-3UTR CAA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGCCTTTATATAAGGCTTaGTGGGTGTCACCATTCTGT +
Preference number: 3 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKPLYKA*WVSPFC
Trigger: ACAGAATGGTGACACCCACAAAGCCTTATATAAAGG...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
3UTR-3UTR CAA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTAAGGTGCAAACATATTaGCCTTTGGCACGAGGACAA +
Preference number: 3 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSKVQTY*PLARGQ
Trigger: TTGTCCTCGTGCCAAAGGCAAATATGTTTGCACCTT...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
3UTR-3UTR CAA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTGAAAGTTGTGTCTATTaGCAAATCCGGATAATGTCG +
Preference number: 3 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSESCVY*QIRIMS
Trigger: CGACATTATCCGGATTTGCAAATAGACACAACTTTC...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
3UTR GCA 72 bp GGAAGTGTAATCAAAGAAAGTGCACTTAAAGCTGTTTaGCAGCAATTAAAAAGTAGCTTCTATACAGCTTCT +
Preference number: 3 (lower is better)
Translates to: GSVIKESALKAV*QQLKSSFYTAS
Trigger: AGAAGCTGTATAGAAGCTACTTTTTAATTGCTGGCAAACAGCTTTAAGTGCACTTTCTTTGATTACACTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp GCGGCTGCTGAGGAGGTCCCTGACCCAATAAAATTTCAGGGCCATTTCCAGGTCCCCGTCCGAGCGTGCTaGGGCCCGCCAAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: AAAEEVPDPIKFQGHFQVPVRAC*GPPSLT
Trigger: TGTGAGGCTTGGCGGGCCGCAGCACGCTCGGACGGG...GACCTGGAAATGGCCCTGAAATTTTATTGGGTCAGGGACCTCCTCAGCAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCTCTTCCAGGGTGACCTaGTGGCGGCCGACCGCGAAC +
Preference number: 4 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVSSRVT*WRPTAN
Trigger: GTTCGCGGTCGGCCGCCACCAGGTCACCCTGGAAGA...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCGCACGAGGAAAACTGTaGAGAATCCACCTTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVARGKL*RIHLRP
Trigger: TGGCCGAAGGTGGATTCTCCACAGTTTTCCTCGTGC...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp GCGGCTGCTGAGGAGGTCCCTGACCCAATAAAATTTCAGGGCCATTTCCAGGTCTACTCTATGCTGCTGTaGCGGCTGCTGAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: AAAEEVPDPIKFQGHFQVYSMLL*RLLRRS
Trigger: GGACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTA...GACCTGGAAATGGCCCTGAAATTTTATTGGGTCAGGGACCTCCTCAGCAGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR GCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATGGCCCGTCCGAGCGTaGTGCGGCCCGCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEWPVRA*CGPPSL
Trigger: GAGGCTTGGCGGGCCGCAGCACGCTCGGACGGGCCA...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp CTTGGTGCAATTGAGGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTGCGACTCTTCCAGGGTaGCCTGGTGGCGGCCGACCG +
Preference number: 4 (lower is better)
Translates to: LGAIEVSVGPMVSVILAFATLPG*PGGGRP
Trigger: CGGTCGGCCGCCACCAGGTCACCCTGGAAGAGTCGC...AAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGGCGACTCTTCCAGGGTaGCCTGGTGGCGGCCGACCG +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKATLPG*PGGGRP
Trigger: CGGTCGGCCGCCACCAGGTCACCCTGGAAGAGTCGC...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCATTATGGTTCCAACCTaGGCTGGAAGTGATGAAGTG +
Preference number: 4 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVIMVPT*AGSDEV
Trigger: CACTTCATCACTTCCAGCTCAGGTTGGAACCATAAT...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR GCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCAGGGCGCAGGGAGCGTaGAAGGGCAAGTCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIRAQGA*KGKSPA
Trigger: GGCCGGGGACTTGCCCTTGCACGCTCCCTGCGCCCT...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR GCA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCATACATTCGCTTCAATaGACATCGGATTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVIHSLQ*TSDSTV
Trigger: CACGGTGGAATCCGATGTGCATTGAAGCGAATGTAT...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR GCA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCAATCTCCAATCTCCCTaGTGTAGTTGCTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVNLQSP*CSCWST
Trigger: AGTACTCCAGCAACTACAGCAGGGAGATTGGAGATT...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCTTTAACAGGTGTTGCTaGACTTTGAATGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVFNRCC*TLNGQH
Trigger: GTGCTGACCATTCAAAGTTCAGCAACACCTGTTAAA...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp GCGGCTGCTGAGGAGGTCCCTGACCCAATAAAATTTCAGGGCCATTTCCAGGTCGGTAAGATATTCAGGTaGTGCCTGTTGTTGAGACGG +
Preference number: 4 (lower is better)
Translates to: AAAEEVPDPIKFQGHFQVGKIFR*CLLLRR
Trigger: CCGTCTCAACAACAGGCATCACCTGAATATCTTACC...GACCTGGAAATGGCCCTGAAATTTTATTGGGTCAGGGACCTCCTCAGCAGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR GCA 90 bp GGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTATTTGGCTTTTCCTAGGGCGCAGGGAGCGTaGAAGGGCAAGTCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GFCWSNGICYSGFYLAFPRAQGA*KGKSPA
Trigger: GGCCGGGGACTTGCCCTTGCACGCTCCCTGCGCCCT...AGGAAAAGCCAAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp CTTGGTGCAATTGAGGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTTCCAGGGTGACCTGGTaGCGGCCGACCGCGAACACC +
Preference number: 4 (lower is better)
Translates to: LGAIEVSVGPMVSVILAFSRVTW*RPTANT
Trigger: GGTGTTCGCGGTCGGCCGCCACCAGGTCACCCTGGA...AAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCTCCAGGGTGACCTGGTaGCGGCCGACCGCGAACACC +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHISRVTW*RPTANT
Trigger: GGTGTTCGCGGTCGGCCGCCACCAGGTCACCCTGGA...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTAGCGACTCTTCCAGGGTaGCCTGGTGGCGGCCGACCG +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLATLPG*PGGGRP
Trigger: CGGTCGGCCGCCACCAGGTCACCCTGGAAGAGTCGC...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR TCA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCAGCTTCTTATTCATTTaGTTCACTACCTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVSFLFI*FTTCPA
Trigger: AGCTGGACAGGTAGTGAATCAAATGAATAAGAAGCT...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR GCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTCCCGTCCGAGCGTGCTaGGGCCCGCCAAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSPVRAC*GPPSLT
Trigger: TGTGAGGCTTGGCGGGCCGCAGCACGCTCGGACGGG...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTACCCGTCCGAGCGTGCTaGGGCCCGCCAAGCCTCACA +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLPVRAC*GPPSLT
Trigger: TGTGAGGCTTGGCGGGCCGCAGCACGCTCGGACGGG...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR GCA 90 bp CAGAAGGTTGTGGTTGATATACCGAATGCATTAAAAATTGTTGTTGAAGCATCTTGGCCCGTCCGAGCGTaGTGCGGCCCGCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: QKVVVDIPNALKIVVEASWPVRA*CGPPSL
Trigger: GAGGCTTGGCGGGCCGCAGCACGCTCGGACGGGCCA...AGATGCTTCAACAACAATTTTTAATGCATTCGGTATATCAACCACAACCTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR GCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTAGGGCGCAGGGAGCGTaGAAGGGCAAGTCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSRAQGA*KGKSPA
Trigger: GGCCGGGGACTTGCCCTTGCACGCTCCCTGCGCCCT...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGTCTTCCAGGGTGACCTaGTGGCGGCCGACCGCGAAC +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKSSRVT*WRPTAN
Trigger: GTTCGCGGTCGGCCGCCACCAGGTCACCCTGGAAGA...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCTCTTCCAGGGTGACCTaGTGGCGGCCGACCGCGAAC +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHISSRVT*WRPTAN
Trigger: GTTCGCGGTCGGCCGCCACCAGGTCACCCTGGAAGA...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCGTTTACAACACTTATTaGTGTTGGAGACTGGACAAT +
Preference number: 4 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVVYNTY*CWRLDN
Trigger: ATTGTCCAGTCTCCAACATCAATAAGTGTTGTAAAC...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR GCA 90 bp GGTCTTAGTGCCCCTTTTGGTCTATGGTTACCGAATTCACCAGGAGCAAGGACTGCTTTTCCTAGCAGCTaGTTCACTAGCAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: GLSAPFGLWLPNSPGARTAFPSS*FTSSHR
Trigger: CCGATGACTGCTAGTGAAGCAGCTGCTAGGAAAAGC...AGTCCTTGCTCCTGGTGAATTCGGTAACCATAGACCAAAAGGGGCACTAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTTCCAGGGTGACCTGGTaGCGGCCGACCGCGAACACC +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSSRVTW*RPTANT
Trigger: GGTGTTCGCGGTCGGCCGCCACCAGGTCACCCTGGA...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
3UTR CAA 72 bp ATGGTCAGCACACTGGGAGTGGCAGTAGTAGCAGAGTaGGCCTTTGGTCTTTGTCTTGGTGCAATTGAGGTT +
Preference number: 4 (lower is better)
Translates to: MVSTLGVAVVAE*AFGLCLGAIEV
Trigger: AACCTCAATTGCACCAAGACAAAGACCAAAGGCCAACTCTGCTACTACTGCCACTCCCAGTGTGCTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATACTCTATGCTGCTGTaGCGGCTGCTGAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEYSMLL*RLLRRS
Trigger: GGACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTA...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp GGTCTTAGTGCCCCTTTTGGTCTATGGTTACCGAATTCACCAGGAGCAAGGACTACCTTCAGATCCCGGTaGATTATTGGAGTCTTACAC +
Preference number: 4 (lower is better)
Translates to: GLSAPFGLWLPNSPGARTTFRSR*IIGVLH
Trigger: GTGTAAGACTCCAATAATTCACCGGGATCTGAAGGT...AGTCCTTGCTCCTGGTGAATTCGGTAACCATAGACCAAAAGGGGCACTAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR GCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAACCAGGGATAGTATGTaGCTCAGGCCCCACTGCATG +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPETRDSM*LRPHCM
Trigger: CATGCAGTGGGGCCTGAGGCACATACTATCCCTGGT...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp AATTTGCAATGGCCTCTTTATCAGCAACTGACCTATTGGCACTATAGGAGGAGTGGTGTTGCTGAACTTTaGATGGTCAGCACACTGGGA +
Preference number: 4 (lower is better)
Translates to: NLQWPLYQQLTYWHYRRSGVAEL*MVSTLG
Trigger: TCCCAGTGTGCTGACCATTCAAAGTTCAGCAACACC...ACTCCTCCTATAGTGCCAATAGGTCAGTTGCTGATAAAGAGGCCATTGCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR GCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAGCTTTTCCTAGCAGCTaGTTCACTAGCAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEAFPSS*FTSSHR
Trigger: CCGATGACTGCTAGTGAAGCAGCTGCTAGGAAAAGC...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTGAGAGAACTTCTTCATaGTCCCGCCGGCGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSERTSS*SRRRAG
Trigger: TCCAGCTCGCCGGCGGGACCATGAAGAAGTTCTCTC...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTATGCCGCCCTCCGACTTaGGCATCCGAGAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLCRPPT*ASERTS
Trigger: AGAAGTTCTCTCGGATGCCCAAGTCGGAGGGCGGCA...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR CCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTTGCCGCCCTCCGACTTaGGCATCCGAGAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSCRPPT*ASERTS
Trigger: AGAAGTTCTCTCGGATGCCCAAGTCGGAGGGCGGCA...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCGCACGAGGAAAACTGTaGAGAATCCACCTTCGGCCA +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIARGKL*RIHLRP
Trigger: TGGCCGAAGGTGGATTCTCCACAGTTTTCCTCGTGC...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp AGGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTATTTGGCTTTTCCCATCGGATTCCACCGTaGGTACGCACGAGGAAAACT +
Preference number: 4 (lower is better)
Translates to: RFLLVQWYLLFWLLFGFSHRIPP*VRTRKT
Trigger: AGTTTTCCTCGTGCGTACTCACGGTGGAATCCGATG...GGAAAAGCCAAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp AATTTGCAATGGCCTCTTTATCAGCAACTGACCTATTGGCACTATAGGAGGAGTTCCCTCCATAAAGGTTaGTCATTTCAGGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: NLQWPLYQQLTYWHYRRSSLHKG*SFQGLC
Trigger: ACAGAGCCCCTGAAATGATCAACCTTTATGGAGGGA...ACTCCTCCTATAGTGCCAATAGGTCAGTTGCTGATAAAGAGGCCATTGCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATCCCTCCATAAAGGTTaGTCATTTCAGGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPESLHKG*SFQGLC
Trigger: ACAGAGCCCCTGAAATGATCAACCTTTATGGAGGGA...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAGGTAAGATATTCAGGTaGTGCCTGTTGTTGAGACGG +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEGKIFR*CLLLRR
Trigger: CCGTCTCAACAACAGGCATCACCTGAATATCTTACC...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAGTGGGAGGGGGAGACTaGGTCTATCTCATAATTGTT +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEVGGGD*VYLIIV
Trigger: AACAATTATGAGATAGACTCAGTCTCCCCCTCCCAC...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCGCTTTTCCTAGCAGCTaGTTCACTAGCAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIAFPSS*FTSSHR
Trigger: CCGATGACTGCTAGTGAAGCAGCTGCTAGGAAAAGC...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CCA 90 bp CAGAAGGTTGTGGTTGATATACCGAATGCATTAAAAATTGTTGTTGAAGCATCTGAGAGAACTTCTTCATaGTCCCGCCGGCGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: QKVVVDIPNALKIVVEASERTSS*SRRRAG
Trigger: TCCAGCTCGCCGGCGGGACCATGAAGAAGTTCTCTC...AGATGCTTCAACAACAATTTTTAATGCATTCGGTATATCAACCACAACCTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTGAGAGAACTTCTTCATaGTCCCGCCGGCGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SYLATYSKHSHHSFKKDIERTSS*SRRRAG
Trigger: TCCAGCTCGCCGGCGGGACCATGAAGAAGTTCTCTC...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAGCCCCTTTTGGTCTATaGTTACCGAATTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEAPFGL*LPNSPG
Trigger: TCCTGGTGAATTCGGTAACCATAGACCAAAAGGGGC...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAATACTCTATGCTGCTGTaGCGGCTGCTGAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKYSMLL*RLLRRS
Trigger: GGACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTA...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAACAGCAACTGACCTATTaGCACTATAGGAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEQQLTY*HYRRSP
Trigger: TGGACTCCTCCTATAGTGCCAATAGGTCAGTTGCTG...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTCATCGGATTCCACCGTaGGTACGCACGAGGAAAACT +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSHRIPP*VRTRKT
Trigger: AGTTTTCCTCGTGCGTACTCACGGTGGAATCCGATG...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCTATCAGCCTTGGTGGTaGTGGGTTTCCCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIYQPWW*WVSLHK
Trigger: TTTATGGAGGGAAACCCATCACCACCAAGGCTGATA...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATCACAGATAGCAACCTaGCTCTCACCAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPESQIAT*LSPKGR
Trigger: TCTTCCTTTTGGTGAGAGTCAGGTTGCTATCTGTGA...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp TATCAGCAACTGACCTATTGGCACTATAGGAGGAGTCCATTATGGTTCCAACCTTTGTCTTGGTGCAATTaGGGTTTCTGTTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: YQQLTYWHYRRSPLWFQPLSWCN*GFCWSN
Trigger: ATTGGACCAACAGAAACCTCAATTGCACCAAGACAA...AGGTTGGAACCATAATGGACTCCTCCTATAGTGCCAATAGGTCAGTTGCTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAATTATGGTTCCAACCTaGGCTGGAAGTGATGAAGTG +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEIMVPT*AGSDEV
Trigger: CACTTCATCACTTCCAGCTCAGGTTGGAACCATAAT...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp AATTTGCAATGGCCTCTTTATCAGCAACTGACCTATTGGCACTATAGGAGGAGTAAAAGGATTCCACCCTaGCATATCAGGTGGATTGCT +
Preference number: 4 (lower is better)
Translates to: NLQWPLYQQLTYWHYRRSKRIPP*HIRWIA
Trigger: AGCAATCCACCTGATATGTCAGGGTGGAATCCTTTT...ACTCCTCCTATAGTGCCAATAGGTCAGTTGCTGATAAAGAGGCCATTGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAAAAAGGATTCCACCCTaGCATATCAGGTGGATTGCT +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEKRIPP*HIRWIA
Trigger: AGCAATCCACCTGATATGTCAGGGTGGAATCCTTTT...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGGTCTACATTCTTATCTaGGGATGCTCTCTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKVYILI*GCSLLE
Trigger: CTCGAGGAGAGAGCATCCTCAGATAAGAATGTAGAC...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATTCTTTCCAGTCCGCTaGTCTTTAGATGCTGGACTT +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEFFPVR*SLDAGL
Trigger: AAGTCCAGCATCTAAAGATCAGCGGACTGGAAAGAA...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAAATCTCCAATCTCCCTaGTGTAGTTGCTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPENLQSP*CSCWST
Trigger: AGTACTCCAGCAACTACAGCAGGGAGATTGGAGATT...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCCACACTTGTTTTGTGTaGACACCTGCACACACATGC +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIHTCFV*TPAHTC
Trigger: GCATGTGTGTGCAGGTGTGCACACAAAACAAGTGTG...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTGCACGAGGAAAACTGTaGAGAATCCACCTTCGGCCA +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSARGKL*RIHLRP
Trigger: TGGCCGAAGGTGGATTCTCCACAGTTTTCCTCGTGC...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCGCCCCTTTTGGTCTATaGTTACCGAATTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIAPFGL*LPNSPG
Trigger: TCCTGGTGAATTCGGTAACCATAGACCAAAAGGGGC...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGAGGAGGAGTCCATTATaGTTCCAACCTGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKRRSPL*FQPELE
Trigger: TTCCAGCTCAGGTTGGAACCATAATGGACTCCTCCT...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAGGATCTTCTGGAGGATaGTTATGTGGAGCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEGSSGG*LCGAES
Trigger: ACTTTCTGCTCCACATAACCATCCTCCAGAAGATCC...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGACCTTCAGATCCCGGTaGATTATTGGAGTCTTACAC +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKTFRSR*IIGVLH
Trigger: GTGTAAGACTCCAATAATTCACCGGGATCTGAAGGT...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCACCTTCAGATCCCGGTaGATTATTGGAGTCTTACAC +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHITFRSR*IIGVLH
Trigger: GTGTAAGACTCCAATAATTCACCGGGATCTGAAGGT...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp TATCAGCAACTGACCTATTGGCACTATAGGAGGAGTCCATTATGGTTCCAACCTTTCAGGGGCTCTGTATaGCAGAGTTGTATACTTTTT +
Preference number: 4 (lower is better)
Translates to: YQQLTYWHYRRSPLWFQPFRGSV*QSCILF
Trigger: AAAAAGTATACAACTCTGTCATACAGAGCCCCTGAA...AGGTTGGAACCATAATGGACTCCTCCTATAGTGCCAATAGGTCAGTTGCTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp AGGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTATTTGGCTTTTCCTATCAGCCTTGGTGGTaGTGGGTTTCCCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: RFLLVQWYLLFWLLFGFSYQPWW*WVSLHK
Trigger: TTTATGGAGGGAAACCCATCACCACCAAGGCTGATA...GGAAAAGCCAAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTGGTGTTGCTGAACTTTaGATGGTCAGCACACTGGGA +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSGVAEL*MVSTLG
Trigger: TCCCAGTGTGCTGACCATTCAAAGTTCAGCAACACC...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATTTAACAGGTGTTGCTaGACTTTGAATGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEFNRCC*TLNGQH
Trigger: GTGCTGACCATTCAAAGTTCAGCAACACCTGTTAAA...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGCATTGTAGGATACTGTaGTGCAGAAGGTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKHCRIL*CRRLWL
Trigger: CAACCACAACCTTCTGCATCACAGTATCCTACAATG...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAAGGAGAAGGGGGATCTaGTTCAAAATCACTTTCAGA +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPERRRGI*FKITFR
Trigger: TCTGAAAGTGATTTTGAATCAGATCCCCCTTCTCCT...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTATCTCCCTGCTGTAGTTaGTGGAGTACTCTATGCTGC +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLSPCCS*WSTLCC
Trigger: GCAGCATAGAGTACTCCAGCAACTACAGCAGGGAGA...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR GCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTTCTCCCTGCTGTAGTTaGTGGAGTACTCTATGCTGC +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSSPCCS*WSTLCC
Trigger: GCAGCATAGAGTACTCCAGCAACTACAGCAGGGAGA...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATGCTGTAAATGGAGTTaGTGTAATCTCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPECCKWS*CNLQSP
Trigger: GGGAGATTGGAGATTACAGCAACTCCATTTACAGCA...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGGTAACGAGAATTGTCTaGGATGGTGAAGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKVTRIV*DGEVAI
Trigger: GATGGCAACTTCACCATCCCAGACAATTCTCGTTAC...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp GGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTATTTGGCTTTTCCTGCCCCTTTTGGTCTATaGTTACCGAATTCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GFCWSNGICYSGFYLAFPAPFGL*LPNSPG
Trigger: TCCTGGTGAATTCGGTAACCATAGACCAAAAGGGGC...AGGAAAAGCCAAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp AATAAGCCTTCAAGTGTCCCTTACTTGATCTTAGAAGGTCAAATTCTCTGTCCACAGCAACTGACCTATTaGCACTATAGGAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: NKPSSVPYLILEGQILCPQQLTY*HYRRSP
Trigger: TGGACTCCTCCTATAGTGCCAATAGGTCAGTTGCTG...TGGACAGAGAATTTGACCTTCTAAGATCAAGTAAGGGACACTTGAAGGCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGACCAAAAGGATCTTCTaGAGGATGGTTATGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKTKRIF*RMVMWS
Trigger: GCTCCACATAACCATCCTCCAGAAGATCCTTTTGGT...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAAGCTTCTTATTCATTTaGTTCACTACCTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPESFLFI*FTTCPA
Trigger: AGCTGGACAGGTAGTGAATCAAATGAATAAGAAGCT...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTTATCAGCCTTGGTGGTaGTGGGTTTCCCTCCATAAA +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSYQPWW*WVSLHK
Trigger: TTTATGGAGGGAAACCCATCACCACCAAGGCTGATA...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp AATAAGCCTTCAAGTGTCCCTTACTTGATCTTAGAAGGTCAAATTCTCTGTCCATCACAGATAGCAACCTaGCTCTCACCAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: NKPSSVPYLILEGQILCPSQIAT*LSPKGR
Trigger: TCTTCCTTTTGGTGAGAGTCAGGTTGCTATCTGTGA...TGGACAGAGAATTTGACCTTCTAAGATCAAGTAAGGGACACTTGAAGGCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAGGTGTTGCTGAACTTTaGATGGTCAGCACACTGGGA +
Preference number: 4 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKGVAEL*MVSTLG
Trigger: TCCCAGTGTGCTGACCATTCAAAGTTCAGCAACACC...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp GGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTATTTGGCTTTTCCTCATTGTAGGATACTGTaGTGCAGAAGGTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GFCWSNGICYSGFYLAFPHCRIL*CRRLWL
Trigger: CAACCACAACCTTCTGCATCACAGTATCCTACAATG...AGGAAAAGCCAAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp CTTGGTGCAATTGAGGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTCTCTTTATCAGCAACTaGCCTATTGGCACTATAGGA +
Preference number: 4 (lower is better)
Translates to: LGAIEVSVGPMVSVILAFLFISN*PIGTIG
Trigger: TCCTATAGTGCCAATAGGTCAGTTGCTGATAAAGAG...AAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGCTCTTTATCAGCAACTaGCCTATTGGCACTATAGGA +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKLFISN*PIGTIG
Trigger: TCCTATAGTGCCAATAGGTCAGTTGCTGATAAAGAG...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTGAGCCAAACTTTTATTaGGTGCTGTGTGCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSEPNFY*VLCARY
Trigger: GTACCTGGCACACAGCACTCAATAAAAGTTTGGCTC...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTTCTCCCTGCTGTAGTTaGTGGAGTACTCTATGCTGC +
Preference number: 4 (lower is better)
Translates to: SYLATYSKHSHHSFKKDISPCCS*WSTLCC
Trigger: GCAGCATAGAGTACTCCAGCAACTACAGCAGGGAGA...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR GCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCTGCTGTAAATGGAGTTaGTGTAATCTCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHICCKWS*CNLQSP
Trigger: GGGAGATTGGAGATTACAGCAACTCCATTTACAGCA...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CCA 90 bp GGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTATTTGGCTTTTCCTGTAACGAGAATTGTCTaGGATGGTGAAGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: GFCWSNGICYSGFYLAFPVTRIV*DGEVAI
Trigger: GATGGCAACTTCACCATCCCAGACAATTCTCGTTAC...AGGAAAAGCCAAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTAAGGAGGAGTCCATTATaGTTCCAACCTGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLRRSPL*FQPELE
Trigger: TTCCAGCTCAGGTTGGAACCATAATGGACTCCTCCT...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR TCA 90 bp AGGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTATTTGGCTTTTCCGGTCTGGCATGTTATTaGCATACATTCGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: RFLLVQWYLLFWLLFGFSGLACY*HTFASM
Trigger: CATTGAAGCGAATGTATGTCAATAACATGCCAGACC...GGAAAAGCCAAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCTTCAGGGGCTCTGTATaGCAGAGTTGTATACTTTTT +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIFRGSV*QSCILF
Trigger: AAAAAGTATACAACTCTGTCATACAGAGCCCCTGAA...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAATCCCTCCATAAAGGTTaGTCATTTCAGGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKSLHKG*SFQGLC
Trigger: ACAGAGCCCCTGAAATGATCAACCTTTATGGAGGGA...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTACATTGTAGGATACTGTaGTGCAGAAGGTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLHCRIL*CRRLWL
Trigger: CAACCACAACCTTCTGCATCACAGTATCCTACAATG...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR TCA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTGGTAAGATATTCAGGTaGTGCCTGTTGTTGAGACGG +
Preference number: 4 (lower is better)
Translates to: SYLATYSKHSHHSFKKDIGKIFR*CLLLRR
Trigger: CCGTCTCAACAACAGGCATCACCTGAATATCTTACC...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATGTTCTTCTGATTTGTaGAATTTGCAATGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPECSSDL*NLQWPL
Trigger: AAGAGGCCATTGCAAATTTCACAAATCAGAAGAACA...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGCGGTTCAGGAAGAGCTaGAGGAATAGAAGAATTATT +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKRFRKS*RNRRII
Trigger: AATAATTCTTCTATTCCTTCAGCTCTTCCTGAACCG...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCCGGTTCAGGAAGAGCTaGAGGAATAGAAGAATTATT +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIRFRKS*RNRRII
Trigger: AATAATTCTTCTATTCCTTCAGCTCTTCCTGAACCG...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGCTTTTCAGGAGAACCTaGATGAGAAATGAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKLFRRT*MRNERN
Trigger: GTTCCTTTCATTTCTCATTCAGGTTCTCCTGAAAAG...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTATACATTCGCTTCAATaGACATCGGATTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSIHSLQ*TSDSTV
Trigger: CACGGTGGAATCCGATGTGCATTGAAGCGAATGTAT...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTAAATCTCCAATCTCCCTaGTGTAGTTGCTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLNLQSP*CSCWST
Trigger: AGTACTCCAGCAACTACAGCAGGGAGATTGGAGATT...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR GCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAGTTCTTGATAGGGTTTaGAGTGCCATTTTCTTGATT +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEVLDRV*SAIFLI
Trigger: AATCAAGAAAATGGCACTGCAAACCCTATCAAGAAC...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATGGTTAAAAATTCATTaGTACTTTGAGAGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEWLKIH*YFESLG
Trigger: GCCGAGACTCTCAAAGTAGCAATGAATTTTTAACCA...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGTCTATGTTCCGGATCTaGTTCAAGCATGAACCTTAT +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKSMFRI*FKHEPY
Trigger: ATAAGGTTCATGCTTGAACCAGATCCGGAACATAGA...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp CAGAAGGTTGTGGTTGATATACCGAATGCATTAAAAATTGTTGTTGAAGCATCTAGGAGGAGTCCATTATaGTTCCAACCTGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: QKVVVDIPNALKIVVEASRRSPL*FQPELE
Trigger: TTCCAGCTCAGGTTGGAACCATAATGGACTCCTCCT...AGATGCTTCAACAACAATTTTTAATGCATTCGGTATATCAACCACAACCTTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTCAGCAACTGACCTATTaGCACTATAGGAGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SYLATYSKHSHHSFKKDIQQLTY*HYRRSP
Trigger: TGGACTCCTCCTATAGTGCCAATAGGTCAGTTGCTG...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAACTGATCTTTAGATGCTaGACTTGTTTTACCGTTCTT +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPELIFRC*TCFTVL
Trigger: AAGAACGGTAAAACAAGTCCAGCATCTAAAGATCAG...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTGGTCTGGCATGTTATTaGCATACATTCGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSGLACY*HTFASM
Trigger: CATTGAAGCGAATGTATGTCAATAACATGCCAGACC...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTTCACAGATAGCAACCTaGCTCTCACCAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SYLATYSKHSHHSFKKDISQIAT*LSPKGR
Trigger: TCTTCCTTTTGGTGAGAGTCAGGTTGCTATCTGTGA...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTTTGTCTTGGTGCAATTaGGGTTTCTGTTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSLSWCN*GFCWSN
Trigger: ATTGGACCAACAGAAACCTCAATTGCACCAAGACAA...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTATTTAACAGGTGTTGCTaGACTTTGAATGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLFNRCC*TLNGQH
Trigger: GTGCTGACCATTCAAAGTTCAGCAACACCTGTTAAA...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR TCA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAATTATGGTTCCAACCTaGGCTGGAAGTGATGAAGTG +
Preference number: 4 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKIMVPT*AGSDEV
Trigger: CACTTCATCACTTCCAGCTCAGGTTGGAACCATAAT...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCTGTTCTTCTGATTTGTaGAATTTGCAATGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHICSSDL*NLQWPL
Trigger: AAGAGGCCATTGCAAATTTCACAAATCAGAAGAACA...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTAAAAGGATTCCACCCTaGCATATCAGGTGGATTGCT +
Preference number: 4 (lower is better)
Translates to: SYLATYSKHSHHSFKKDIKRIPP*HIRWIA
Trigger: AGCAATCCACCTGATATGTCAGGGTGGAATCCTTTT...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp CTTGGTGCAATTGAGGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTCTACTATCAAGCAACTaGTTTCTAATGCACACAACA +
Preference number: 4 (lower is better)
Translates to: LGAIEVSVGPMVSVILAFLLSSN*FLMHTT
Trigger: TGTTGTGTGCATTAGAAATCAGTTGCTTGATAGTAG...AAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGTTTCAAACAAAACAGTaGATCAGGGACAGAATTCAG +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKFQTKQ*IRDRIQ
Trigger: CTGAATTCTGTCCCTGATTCACTGTTTTGTTTGAAA...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTATACATTCGCTTCAATaGACATCGGATTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: SYLATYSKHSHHSFKKDIIHSLQ*TSDSTV
Trigger: CACGGTGGAATCCGATGTGCATTGAAGCGAATGTAT...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR GCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTCCGCTGATCTTTAGATaGTGGACTTGTTTTACCGTT +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSPLIFR*WTCFTV
Trigger: AACGGTAAAACAAGTCCAGCATCTAAAGATCAGCGG...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTGTAAGAAAACTGCTCTaGCTGGTGAACTTCAGCATA +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSVRKLL*LVNFSI
Trigger: TATGCTGAAGTTCACCAGGCAGAGCAGTTTTCTTAC...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTGTAACGAGAATTGTCTaGGATGGTGAAGTTGCCATC +
Preference number: 4 (lower is better)
Translates to: SYLATYSKHSHHSFKKDIVTRIV*DGEVAI
Trigger: GATGGCAACTTCACCATCCCAGACAATTCTCGTTAC...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CCA 90 bp AATAAGCCTTCAAGTGTCCCTTACTTGATCTTAGAAGGTCAAATTCTCTGTCCATCTATGTTCCGGATCTaGTTCAAGCATGAACCTTAT +
Preference number: 4 (lower is better)
Translates to: NKPSSVPYLILEGQILCPSMFRI*FKHEPY
Trigger: ATAAGGTTCATGCTTGAACCAGATCCGGAACATAGA...TGGACAGAGAATTTGACCTTCTAAGATCAAGTAAGGGACACTTGAAGGCTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTGATGTTGGAGACTaGACAATCCTTTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIIDVGD*TILFGK
Trigger: TTTGCCAAAAAGGATTGTCCAGTCTCCAACATCAAT...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CCA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATGGTATCTGTTATTCTaGCTTTTATTTGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEWYLLF*LLFGFS
Trigger: GGAAAAGCCAAATAAAAGCCAGAATAACAGATACCA...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502613.3
3UTR CAA 72 bp CCTTTGGTCTTTGTCTTGGTGCAATTGAGGTTTCTGTaGGTCCAATGGTATCTGTTATTCTGGCTTTTATTT +
Preference number: 4 (lower is better)
Translates to: PLVFVLVQLRFL*VQWYLLFWLLF
Trigger: AAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAGACAAAGACCAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAGGTCTGGCATGTTATTaGCATACATTCGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKGLACY*HTFASM
Trigger: CATTGAAGCGAATGTATGTCAATAACATGCCAGACC...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTTTCAGGGGCTCTGTATaGCAGAGTTGTATACTTTTT +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSFRGSV*QSCILF
Trigger: AAAAAGTATACAACTCTGTCATACAGAGCCCCTGAA...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAATTGTCTTGGTGCAATTaGGGTTTCTGTTGGTCCAAT +
Preference number: 4 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKLSWCN*GFCWSN
Trigger: ATTGGACCAACAGAAACCTCAATTGCACCAAGACAA...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTAGCAGAAGGTTGTGGTTaGTATACCGAATGCATTAAA +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLAEGCG*YTECIK
Trigger: TTTAATGCATTCGGTATATCAACCACAACCTTCTGC...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR TCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTGCAGAAGGTTGTGGTTaGTATACCGAATGCATTAAA +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSAEGCG*YTECIK
Trigger: TTTAATGCATTCGGTATATCAACCACAACCTTCTGC...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR TCA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAACTCTTTATCAGCAACTaGCCTATTGGCACTATAGGA +
Preference number: 4 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKLFISN*PIGTIG
Trigger: TCCTATAGTGCCAATAGGTCAGTTGCTGATAAAGAG...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp AATAAGCCTTCAAGTGTCCCTTACTTGATCTTAGAAGGTCAAATTCTCTGTCCAAGTCTTTGGCCTTGCTaGATAATAATAGAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: NKPSSVPYLILEGQILCPSLWPC*IIIELL
Trigger: TAACAGCTCTATTATTATTCAGCAAGGCCAAAGACT...TGGACAGAGAATTTGACCTTCTAAGATCAAGTAAGGGACACTTGAAGGCTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTTCAGGAGAACCTGAATaGGAAATGAAAGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSSGEPE*EMKGTE
Trigger: TTCTGTTCCTTTCATTTCTCATTCAGGTTCTCCTGA...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR GCA 90 bp CAGAAGGTTGTGGTTGATATACCGAATGCATTAAAAATTGTTGTTGAAGCATCTTGCTGTAAATGGAGTTaGTGTAATCTCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: QKVVVDIPNALKIVVEASCCKWS*CNLQSP
Trigger: GGGAGATTGGAGATTACAGCAACTCCATTTACAGCA...AGATGCTTCAACAACAATTTTTAATGCATTCGGTATATCAACCACAACCTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGACAAACATTGAGGTCTaGCATGTTATTGACATACAT +
Preference number: 4 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKTNIEV*HVIDIH
Trigger: ATGTATGTCAATAACATGCCAGACCTCAATGTTTGT...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCACAAACATTGAGGTCTaGCATGTTATTGACATACAT +
Preference number: 4 (lower is better)
Translates to: SRSELFAPIWQPTQNTHITNIEV*HVIDIH
Trigger: ATGTATGTCAATAACATGCCAGACCTCAATGTTTGT...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTATCTATGTTCCGGATCTaGTTCAAGCATGAACCTTAT +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLSMFRI*FKHEPY
Trigger: ATAAGGTTCATGCTTGAACCAGATCCGGAACATAGA...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR TCA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGCTTCTTATTCATTTaGTTCACTACCTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKSFLFI*FTTCPA
Trigger: AGCTGGACAGGTAGTGAATCAAATGAATAAGAAGCT...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR TCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTATGTTCTTCTGATTTGTaGAATTTGCAATGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLCSSDL*NLQWPL
Trigger: AAGAGGCCATTGCAAATTTCACAAATCAGAAGAACA...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR TCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTAAGTCTTTGGCCTTGCTaGATAATAATAGAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLSLWPC*IIIELL
Trigger: TAACAGCTCTATTATTATTCAGCAAGGCCAAAGACT...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR TCA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTATGTGTGGCGAAGCTTaGCATATATTAGGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: SYLATYSKHSHHSFKKDIMCGEA*HILGSS
Trigger: TGAACTACCTAATATATGTCAAGCTTCGCCACACAT...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR GCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTTACTCCTTAGGAAAATaGCTCTACTACAACACAAAG +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSYSLGK*LYYNTK
Trigger: CTTTGTGTTGTAGTAGAGGCATTTTCCTAAGGAGTA...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTAATTGATGTTGGAGACTaGACAATCCTTTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLIDVGD*TILFGK
Trigger: TTTGCCAAAAAGGATTGTCCAGTCTCCAACATCAAT...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR CCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTATTGATGTTGGAGACTaGACAATCCTTTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSIDVGD*TILFGK
Trigger: TTTGCCAAAAAGGATTGTCCAGTCTCCAACATCAAT...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp AGGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTATTTGGCTTTTCCTGGTATCTGTTATTCTaGCTTTTATTTGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RFLLVQWYLLFWLLFGFSWYLLF*LLFGFS
Trigger: GGAAAAGCCAAATAAAAGCCAGAATAACAGATACCA...GGAAAAGCCAAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTTTTCTGTTGGTCCAATaGTATCTGTTATTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSFLLVQ*YLLFWL
Trigger: AAGCCAGAATAACAGATACCATTGGACCAACAGAAA...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp GGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTATTTGGCTTTTCCTATATGTATAAGAAGATaGCCTGAATTTTGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: GFCWSNGICYSGFYLAFPICIRR*PEFCPQ
Trigger: TTGAGGGCAAAATTCAGGCCATCTTCTTATACATAT...AGGAAAAGCCAAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR TCA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAACTACTATCAAGCAACTaGTTTCTAATGCACACAACA +
Preference number: 4 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKLLSSN*FLMHTT
Trigger: TGTTGTGTGCATTAGAAATCAGTTGCTTGATAGTAG...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTAACAAACATTGAGGTCTaGCATGTTATTGACATACAT +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLTNIEV*HVIDIH
Trigger: ATGTATGTCAATAACATGCCAGACCTCAATGTTTGT...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR CCA 90 bp CAGAAGGTTGTGGTTGATATACCGAATGCATTAAAAATTGTTGTTGAAGCATCTTTTCTGTTGGTCCAATaGTATCTGTTATTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QKVVVDIPNALKIVVEASFLLVQ*YLLFWL
Trigger: AAGCCAGAATAACAGATACCATTGGACCAACAGAAA...AGATGCTTCAACAACAATTTTTAATGCATTCGGTATATCAACCACAACCTTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CCA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAATTTCTGTTGGTCCAATaGTATCTGTTATTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKFLLVQ*YLLFWL
Trigger: AAGCCAGAATAACAGATACCATTGGACCAACAGAAA...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CCA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTAATATGTATAAGAAGATaGCCTGAATTTTGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLICIRR*PEFCPQ
Trigger: TTGAGGGCAAAATTCAGGCCATCTTCTTATACATAT...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR CCA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTCTTTTTGCTCCTATTTaGCAACCTACTCAAAACACT +
Preference number: 4 (lower is better)
Translates to: SYLATYSKHSHHSFKKDILFAPI*QPTQNT
Trigger: AGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000502871.5
3UTR CAA 72 bp TTTCCTCCTCCACCTATTATACTTACCATGCAATTTTaGTGTCTTAGCAGATACATTCTTCAATGCCATAAA +
Preference number: 4 (lower is better)
Translates to: FPPPPIILTMQF*CLSRYILQCHK
Trigger: TTTATGGCATTGAAGAATGTATCTGCTAAGACACAAAAATTGCATGGTAAGTATAATAGGTGGAGGAGGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CCA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAATGGTATCTGTTATTCTaGCTTTTATTTGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKWYLLF*LLFGFS
Trigger: GGAAAAGCCAAATAAAAGCCAGAATAACAGATACCA...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS GCA 90 bp AACTTCTTCATGGTCCCGCCGGCGAGCTGGAGGGCGCAGGGAGCGTaGAAGGGCAAGTCCCCGGCCCGGCGCGCAGCCGGGCGTCCGCGA +
Preference number: 5 (lower is better)
Translates to: NFFMVPPASWRAQGA*KGKSPARRAAGRPR
Trigger: TCGCGGACGCCCGGCTGCGCGCCGGGCCGGGGACTTGCCCTTGCACGCTCCCTGCGCCCTCCAGCTCGCCGGCGGGACCATGAAGAAGTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS CCA 90 bp CAGCCCCGCCACCCGCCGCTCCGCCGCCGCTGCCGCCCTCCGACTTaGGCATCCGAGAGAACTTCTTCATGGTCCCGCCGGCGAGCTGGA +
Preference number: 5 (lower is better)
Translates to: QPRHPPLRRRCRPPT*ASERTSSWSRRRAG
Trigger: TCCAGCTCGCCGGCGGGACCATGAAGAAGTTCTCTCGGATGCCCAAGTCGGAGGGCGGCAGCGGCGGCGGAGCGGCGGGTGGCGGGGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS CCA 90 bp GACTTGGGCATCCGAGAGAACTTCTTCATGGTCCCGCCGGCGAGCTaGAGGGCGCAGGGAGCGTGCAAGGGCAAGTCCCCGGCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: DLGIRENFFMVPPAS*RAQGACKGKSPARR
Trigger: GCGCCGGGCCGGGGACTTGCCCTTGCACGCTCCCTGCGCCCTCCAGCTCGCCGGCGGGACCATGAAGAAGTTCTCTCGGATGCCCAAGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS CCA 90 bp ACTGTGGAGAATCCACCTTCGGCCAGCGACTCTTCCAGGGTGACCTaGTGGCGGCCGACCGCGAACACCCGGACCCCCACGGACGAGCCG +
Preference number: 5 (lower is better)
Translates to: TVENPPSASDSSRVT*WRPTANTRTPTDEP
Trigger: CGGCTCGTCCGTGGGGGTCCGGGTGTTCGCGGTCGGCCGCCACCAGGTCACCCTGGAAGAGTCGCTGGCCGAAGGTGGATTCTCCACAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS TCA 90 bp GGAAAACTGTGGAGAATCCACCTTCGGCCAGCGACTCTTCCAGGGTaGCCTGGTGGCGGCCGACCGCGAACACCCGGACCCCCACGGACG +
Preference number: 5 (lower is better)
Translates to: GKLWRIHLRPATLPG*PGGGRPRTPGPPRT
Trigger: CGTCCGTGGGGGTCCGGGTGTTCGCGGTCGGCCGCCACCAGGTCACCCTGGAAGAGTCGCTGGCCGAAGGTGGATTCTCCACAGTTTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS-3UTR CAA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCCTGCCGCCCTCCGACTaGGGCATCCGAGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVLPPSD*GIRENF
Trigger: GAAGTTCTCTCGGATGCCCAAGTCGGAGGGCGGCAG...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp CCTGCTGTAGTTGCTGGAGTACTCTATGCTGCTGTGGCGGCTGCTGAGGAGGTCTCTGTTGCTGCTGTGTaGCATGTTGATACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: PAVVAGVLYAAVAAAEEVSVAAV*HVDTAA
Trigger: TGCAGCAGTATCAACATGCAACACAGCAGCAACAGA...GACCTCCTCAGCAGCCGCCACAGCAGCATAGAGTACTCCAGCAACTACAGCAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp GGTCTTAGTGCCCCTTTTGGTCTATGGTTACCGAATTCACCAGGAGCAAGGACTGCCCAGATATCAGCCTaGGTGGTGATGGGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: GLSAPFGLWLPNSPGARTAQISA*VVMGFP
Trigger: AGGGAAACCCATCACCACCAAGGCTGATATCTGGGC...AGTCCTTGCTCCTGGTGAATTCGGTAACCATAGACCAAAAGGGGCACTAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAACTGCCGCCCTCCGACTaGGGCATCCGAGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: IPNTYTGIGVRENNYTPELPPSD*GIRENF
Trigger: GAAGTTCTCTCGGATGCCCAAGTCGGAGGGCGGCAG...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp GCGGCTGCTGAGGAGGTCCCTGACCCAATAAAATTTCAGGGCCATTTCCAGGTCGTCTTAGTGCCCCTTTaGGTCTATGGTTACCGAATT +
Preference number: 5 (lower is better)
Translates to: AAAEEVPDPIKFQGHFQVVLVPL*VYGYRI
Trigger: AATTCGGTAACCATAGACCAAAAGGGGCACTAAGAC...GACCTGGAAATGGCCCTGAAATTTTATTGGGTCAGGGACCTCCTCAGCAGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp GCGGCTGCTGAGGAGGTCCCTGACCCAATAAAATTTCAGGGCCATTTCCAGGTCTTGTTGAAGCATCTGTaGCTGCTGTGTTGCATGTTG +
Preference number: 5 (lower is better)
Translates to: AAAEEVPDPIKFQGHFQVLLKHL*LLCCML
Trigger: CAACATGCAACACAGCAGCAACAGATGCTTCAACAA...GACCTGGAAATGGCCCTGAAATTTTATTGGGTCAGGGACCTCCTCAGCAGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS TCA 90 bp ATGTTATTGACATACATTCGCTTCAATGCACATCGGATTCCACCGTaGGTACGCACGAGGAAAACTGTGGAGAATCCACCTTCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: MLLTYIRFNAHRIPP*VRTRKTVENPPSAS
Trigger: GCTGGCCGAAGGTGGATTCTCCACAGTTTTCCTCGTGCGTACTCACGGTGGAATCCGATGTGCATTGAAGCGAATGTATGTCAATAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS-3UTR CAA 90 bp GGTCTTAGTGCCCCTTTTGGTCTATGGTTACCGAATTCACCAGGAGCAAGGACTGCAGTAGTAGCAGAGTaGGCCTTTGGTCTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: GLSAPFGLWLPNSPGARTAVVAE*AFGLCL
Trigger: AAGACAAAGACCAAAGGCCAACTCTGCTACTACTGC...AGTCCTTGCTCCTGGTGAATTCGGTAACCATAGACCAAAAGGGGCACTAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp GCGGCTGCTGAGGAGGTCCCTGACCCAATAAAATTTCAGGGCCATTTCCAGGTCTCAAGTGTCCCTTACTaGATCTTAGAAGGTCAAATT +
Preference number: 5 (lower is better)
Translates to: AAAEEVPDPIKFQGHFQVSSVPY*ILEGQI
Trigger: AATTTGACCTTCTAAGATCAAGTAAGGGACACTTGA...GACCTGGAAATGGCCCTGAAATTTTATTGGGTCAGGGACCTCCTCAGCAGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTCTGCCGCCCTCCGACTaGGGCATCCGAGAGAACTTC +
Preference number: 5 (lower is better)
Translates to: SYLATYSKHSHHSFKKDILPPSD*GIRENF
Trigger: GAAGTTCTCTCGGATGCCCAAGTCGGAGGGCGGCAG...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGGCCCAGATATCAGCCTaGGTGGTGATGGGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKAQISA*VVMGFP
Trigger: AGGGAAACCCATCACCACCAAGGCTGATATCTGGGC...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp GGTCTTAGTGCCCCTTTTGGTCTATGGTTACCGAATTCACCAGGAGCAAGGACTTTTGTCTTGGTGCAATaGAGGTTTCTGTTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: GLSAPFGLWLPNSPGARTFVLVQ*RFLLVQ
Trigger: TTGGACCAACAGAAACCTCAATTGCACCAAGACAAA...AGTCCTTGCTCCTGGTGAATTCGGTAACCATAGACCAAAAGGGGCACTAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS GCA 90 bp ACAAACATTGAGGTCTGGCATGTTATTGACATACATTCGCTTCAATaGACATCGGATTCCACCGTGAGTACGCACGAGGAAAACTGTGGA +
Preference number: 5 (lower is better)
Translates to: TNIEVWHVIDIHSLQ*TSDSTVSTHEENCG
Trigger: TCCACAGTTTTCCTCGTGCGTACTCACGGTGGAATCCGATGTGCATTGAAGCGAATGTATGTCAATAACATGCCAGACCTCAATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS-3UTR CAA 90 bp AATTTGCAATGGCCTCTTTATCAGCAACTGACCTATTGGCACTATAGGAGGAGTTCTGGGATGGTGAAGTaGCCATCACAGATAGCAACC +
Preference number: 5 (lower is better)
Translates to: NLQWPLYQQLTYWHYRRSSGMVK*PSQIAT
Trigger: GGTTGCTATCTGTGATGGCAACTTCACCATCCCAGA...ACTCCTCCTATAGTGCCAATAGGTCAGTTGCTGATAAAGAGGCCATTGCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTAGCCCAGATATCAGCCTaGGTGGTGATGGGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLAQISA*VVMGFP
Trigger: AGGGAAACCCATCACCACCAAGGCTGATATCTGGGC...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR CAA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGTCTGGGATGGTGAAGTaGCCATCACAGATAGCAACC +
Preference number: 5 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKSGMVK*PSQIAT
Trigger: GGTTGCTATCTGTGATGGCAACTTCACCATCCCAGA...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATCTGTTGCTGCTGTGTaGCATGTTGATACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: IPNTYTGIGVRENNYTPESVAAV*HVDTAA
Trigger: TGCAGCAGTATCAACATGCAACACAGCAGCAACAGA...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAGATCCCGGTGAATTATaGGAGTCTTACACTGATGCA +
Preference number: 5 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEDPGEL*ESYTDA
Trigger: TGCATCAGTGTAAGACTCCAATAATTCACCGGGATC...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGGCAGTAGTAGCAGAGTaGGCCTTTGGTCTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKAVVAE*AFGLCL
Trigger: AAGACAAAGACCAAAGGCCAACTCTGCTACTACTGC...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCGCAGTAGTAGCAGAGTaGGCCTTTGGTCTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIAVVAE*AFGLCL
Trigger: AAGACAAAGACCAAAGGCCAACTCTGCTACTACTGC...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAATTGTTGAAGCATCTGTaGCTGCTGTGTTGCATGTTG +
Preference number: 5 (lower is better)
Translates to: IPNTYTGIGVRENNYTPELLKHL*LLCCML
Trigger: CAACATGCAACACAGCAGCAACAGATGCTTCAACAA...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAAAAGGTGCAAACATATTaGCCTTTGGCACGAGGACAA +
Preference number: 5 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEKVQTY*PLARGQ
Trigger: TTGTCCTCGTGCCAAAGGCAAATATGTTTGCACCTT...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp AATTTGCAATGGCCTCTTTATCAGCAACTGACCTATTGGCACTATAGGAGGAGTTATTCTGGCTTTTATTaGGCTTTTCCTAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: NLQWPLYQQLTYWHYRRSYSGFY*AFPSSC
Trigger: GCAGCTGCTAGGAAAAGCCAAATAAAAGCCAGAATA...ACTCCTCCTATAGTGCCAATAGGTCAGTTGCTGATAAAGAGGCCATTGCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGGTCTTAGTGCCCCTTTaGGTCTATGGTTACCGAATT +
Preference number: 5 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKVLVPL*VYGYRI
Trigger: AATTCGGTAACCATAGACCAAAAGGGGCACTAAGAC...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCGTCTTAGTGCCCCTTTaGGTCTATGGTTACCGAATT +
Preference number: 5 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIVLVPL*VYGYRI
Trigger: AATTCGGTAACCATAGACCAAAAGGGGCACTAAGAC...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCCTGCTGTGTTGCATGTaGATACTGCTGCATATAAGC +
Preference number: 5 (lower is better)
Translates to: SRSELFAPIWQPTQNTHILLCCM*ILLHIS
Trigger: GCTTATATGCAGCAGTATCAACATGCAACACAGCAG...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp ATACCCAACACGTACACAGGGATTGGGGTAAGGGAAAATAATTACACTCCTGAACCTTTATATAAGGCTTaGTGGGTGTCACCATTCTGT +
Preference number: 5 (lower is better)
Translates to: IPNTYTGIGVRENNYTPEPLYKA*WVSPFC
Trigger: ACAGAATGGTGACACCCACAAAGCCTTATATAAAGG...TTCAGGAGTGTAATTATTTTCCCTTACCCCAATCCCTGTGTACGTGTTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCGAAAACACACTTGTTTaGTGTGCACACCTGCACACA +
Preference number: 5 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIENTLV*CAHLHT
Trigger: TGTGTGCAGGTGTGCACACAAAACAAGTGTGTTTTC...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp GGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTATTTGGCTTTTCCTGATCCCGGTGAATTATaGGAGTCTTACACTGATGCA +
Preference number: 5 (lower is better)
Translates to: GFCWSNGICYSGFYLAFPDPGEL*ESYTDA
Trigger: TGCATCAGTGTAAGACTCCAATAATTCACCGGGATC...AGGAAAAGCCAAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTTCTGGGATGGTGAAGTaGCCATCACAGATAGCAACC +
Preference number: 5 (lower is better)
Translates to: SYLATYSKHSHHSFKKDISGMVK*PSQIAT
Trigger: GGTTGCTATCTGTGATGGCAACTTCACCATCCCAGA...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGTTTGTCTTGGTGCAATaGAGGTTTCTGTTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKFVLVQ*RFLLVQ
Trigger: TTGGACCAACAGAAACCTCAATTGCACCAAGACAAA...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp AGGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTATTTGGCTTTTCCCTGCTGTGTTGCATGTaGATACTGCTGCATATAAGC +
Preference number: 5 (lower is better)
Translates to: RFLLVQWYLLFWLLFGFSLLCCM*ILLHIS
Trigger: GCTTATATGCAGCAGTATCAACATGCAACACAGCAG...GGAAAAGCCAAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp CTTGGTGCAATTGAGGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTTCCCTTTTACAAACATaGAGGTCTGGCATGTTATTG +
Preference number: 5 (lower is better)
Translates to: LGAIEVSVGPMVSVILAFSLLQT*RSGMLL
Trigger: CAATAACATGCCAGACCTCAATGTTTGTAAAAGGGA...AAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCTCAATTGCACCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp AATTTGCAATGGCCTCTTTATCAGCAACTGACCTATTGGCACTATAGGAGGAGTTGTTTACAACACTTATaGATGTTGGAGACTGGACAA +
Preference number: 5 (lower is better)
Translates to: NLQWPLYQQLTYWHYRRSCLQHL*MLETGQ
Trigger: TTGTCCAGTCTCCAACATCAATAAGTGTTGTAAACA...ACTCCTCCTATAGTGCCAATAGGTCAGTTGCTGATAAAGAGGCCATTGCAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTCTGCTGTGTTGCATGTaGATACTGCTGCATATAAGC +
Preference number: 5 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSLLCCM*ILLHIS
Trigger: GCTTATATGCAGCAGTATCAACATGCAACACAGCAG...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTTCTGTTGCTGCTGTGTaGCATGTTGATACTGCTGCA +
Preference number: 5 (lower is better)
Translates to: SYLATYSKHSHHSFKKDISVAAV*HVDTAA
Trigger: TGCAGCAGTATCAACATGCAACACAGCAGCAACAGA...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTCTTGTTTTACCGTTCTaGATAGGGTTTGCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSLVLPF*IGFAVP
Trigger: TGGCACTGCAAACCCTATCAAGAACGGTAAAACAAG...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAGATCCCGGTGAATTATaGGAGTCTTACACTGATGCA +
Preference number: 5 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKDPGEL*ESYTDA
Trigger: TGCATCAGTGTAAGACTCCAATAATTCACCGGGATC...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTTATTCTGGCTTTTATTaGGCTTTTCCTAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSYSGFY*AFPSSC
Trigger: GCAGCTGCTAGGAAAAGCCAAATAAAAGCCAGAATA...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp AATAAGCCTTCAAGTGTCCCTTACTTGATCTTAGAAGGTCAAATTCTCTGTCCACAATTGAGGTTTCTGTaGGTCCAATGGTATCTGTTA +
Preference number: 5 (lower is better)
Translates to: NKPSSVPYLILEGQILCPQLRFL*VQWYLL
Trigger: TAACAGATACCATTGGACCAACAGAAACCTCAATTG...TGGACAGAGAATTTGACCTTCTAAGATCAAGTAAGGGACACTTGAAGGCTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTATTTGTCTTGGTGCAATaGAGGTTTCTGTTGGTCCAA +
Preference number: 5 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLFVLVQ*RFLLVQ
Trigger: TTGGACCAACAGAAACCTCAATTGCACCAAGACAAA...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389010.7
ENST00000502871.5
CDS-3UTR CAA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAATTGTTGAAGCATCTGTaGCTGCTGTGTTGCATGTTG +
Preference number: 5 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKLLKHL*LLCCML
Trigger: CAACATGCAACACAGCAGCAACAGATGCTTCAACAA...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGGGAATAGAAGAATTATaGATGTTGGAGACTGGACAA +
Preference number: 5 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKGIEEL*MLETGQ
Trigger: TTGTCCAGTCTCCAACATCAATAATTCTTCTATTCC...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp TCTAGAAGTGAGCTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCGGAATAGAAGAATTATaGATGTTGGAGACTGGACAA +
Preference number: 5 (lower is better)
Translates to: SRSELFAPIWQPTQNTHIGIEEL*MLETGQ
Trigger: TTGTCCAGTCTCCAACATCAATAATTCTTCTATTCC...GATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp TTCCACCAGCAAGAGGACAACAGTCTATCACTCTTAAACAATAAACAGGGTAAGCCAAATCATGACCCTTaGCATTATCATCTACCTTAT +
Preference number: 5 (lower is better)
Translates to: FHQQEDNSLSLLNNKQGKPNHDP*HYHLPY
Trigger: ATAAGGTAGATGATAATGCAAAGGGTCATGATTTGG...CTTACCCTGTTTATTGTTTAAGAGTGATAGACTGTTGTCCTCTTGCTGGTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp ATATCAGGACAACAAAGCAGCCCTTTTATGTCACCACTCATTAAAAGGACATTAGCTTTTTGCTCCTATTaGGCAACCTACTCAAAACAC +
Preference number: 5 (lower is better)
Translates to: ISGQQSSPFMSPLIKRTLAFCSY*ATYSKH
Trigger: GTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAGC...TAATGTCCTTTTAATGAGTGGTGACATAAAAGGGCTGCTTTGTTGTCCTGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTTCCCTTTTACAAACATaGAGGTCTGGCATGTTATTG +
Preference number: 5 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSSLLQT*RSGMLL
Trigger: CAATAACATGCCAGACCTCAATGTTTGTAAAAGGGA...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAATATTCTGGCTTTTATTaGGCTTTTCCTAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKYSGFY*AFPSSC
Trigger: GCAGCTGCTAGGAAAAGCCAAATAAAAGCCAGAATA...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTCAATTGAGGTTTCTGTaGGTCCAATGGTATCTGTTA +
Preference number: 5 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSQLRFL*VQWYLL
Trigger: TAACAGATACCATTGGACCAACAGAAACCTCAATTG...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp AGGTTTCTGTTGGTCCAATGGTATCTGTTATTCTGGCTTTTATTTGGCTTTTCCCAAAAGTCTTTGGCCTaGCTGAATAATAATAGAGCT +
Preference number: 5 (lower is better)
Translates to: RFLLVQWYLLFWLLFGFSQKSLA*LNNNRA
Trigger: AGCTCTATTATTATTCAGCAAGGCCAAAGACTTTTG...GGAAAAGCCAAATAAAAGCCAGAATAACAGATACCATTGGACCAACAGAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS-3UTR CAA 90 bp ACAAATGTACCCAAGCGCCTCAAAACTAGTGATATTAATACACTTGTACCTTCTTCTCCTCGAGCCTATTaGATCTTAGAAGGTCAAATT +
Preference number: 5 (lower is better)
Translates to: TNVPKRLKTSDINTLVPSSPRAY*ILEGQI
Trigger: AATTTGACCTTCTAAGATCAAATAGGCTCGAGGAGA...AGAAGGTACAAGTGTATTAATATCACTAGTTTTGAGGCGCTTGGGTACATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS-3UTR CAA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAACTAGAAGTGAGCTTTTaGCTCCTATTTGGCAACCTA +
Preference number: 5 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKLEVSF*LLFGNL
Trigger: TAGGTTGCCAAATAGGAGCAAAAAGCTCACTTCTAG...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp CTTTTTGCTCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAACAATTGAGGTTTCTGTaGGTCCAATGGTATCTGTTA +
Preference number: 5 (lower is better)
Translates to: LFAPIWQPTQNTHIILSKQLRFL*VQWYLL
Trigger: TAACAGATACCATTGGACCAACAGAAACCTCAATTG...TTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGAGCAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTTCAAGTGTCCCTTACTaGATCTTAGAAGGTCAAATT +
Preference number: 5 (lower is better)
Translates to: SYLATYSKHSHHSFKKDISSVPY*ILEGQI
Trigger: AATTTGACCTTCTAAGATCAAGTAAGGGACACTTGA...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS-3UTR CAA 90 bp TCCTATTTGGCAACCTACTCAAAACACTCACATCATTCTTTCAAAAAGGACATTCAAAAGTCTTTGGCCTaGCTGAATAATAATAGAGCT +
Preference number: 5 (lower is better)
Translates to: SYLATYSKHSHHSFKKDIQKSLA*LNNNRA
Trigger: AGCTCTATTATTATTCAGCAAGGCCAAAGACTTTTG...AATGTCCTTTTTGAAAGAATGATGTGAGTGTTTTGAGTAGGTTGCCAAATAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502871.5
CDS GCA 72 bp TCCGCGAGGGGTCGCCGCCCCTGGCCCGTCCGAGCGTaGTGCGGCCCGCCAAGCCTCACATTCCGCGCTCCC +
Preference number: 6 (lower is better)
Translates to: SARGRRPWPVRA*CGPPSLTFRAP
Trigger: GGGAGCGCGGAATGTGAGGCTTGGCGGGCCGCAGCACGCTCGGACGGGCCAGGGGCGGCGACCCCTCGCGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS GCA 72 bp CCCCGCCAGCCCCGCCACCCGCCGCTCCGCCGCCGCTaGCGCCCTCCGACTTGGGCATCCGAGAGAACTTCT +
Preference number: 6 (lower is better)
Translates to: PRQPRHPPLRRR*RPPTWASERTS
Trigger: AGAAGTTCTCTCGGATGCCCAAGTCGGAGGGCGGCAGCGGCGGCGGAGCGGCGGGTGGCGGGGCTGGCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS CAA 90 bp CCAGCCCCGCCACCCGCCGCTCCGCCGCCGCTGCCGCCCTCCGACTaGGGCATCCGAGAGAACTTCTTCATGGTCCCGCCGGCGAGCTGG +
Preference number: 6 (lower is better)
Translates to: PAPPPAAPPPLPPSD*GIRENFFMVPPASW
Trigger: CCAGCTCGCCGGCGGGACCATGAAGAAGTTCTCTCGGATGCCCAAGTCGGAGGGCGGCAGCGGCGGCGGAGCGGCGGGTGGCGGGGCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS CCA 72 bp AATCCACCTTCGGCCAGCGACTCTTCCAGGGTGACCTaGTGGCGGCCGACCGCGAACACCCGGACCCCCACG +
Preference number: 6 (lower is better)
Translates to: NPPSASDSSRVT*WRPTANTRTPT
Trigger: CGTGGGGGTCCGGGTGTTCGCGGTCGGCCGCCACCAGGTCACCCTGGAAGAGTCGCTGGCCGAAGGTGGATT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS TCA 72 bp TGGAGAATCCACCTTCGGCCAGCGACTCTTCCAGGGTaGCCTGGTGGCGGCCGACCGCGAACACCCGGACCC +
Preference number: 6 (lower is better)
Translates to: WRIHLRPATLPG*PGGGRPRTPGP
Trigger: GGGTCCGGGTGTTCGCGGTCGGCCGCCACCAGGTCACCCTGGAAGAGTCGCTGGCCGAAGGTGGATTCTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS CCA 72 bp ATCCGAGAGAACTTCTTCATGGTCCCGCCGGCGAGCTaGAGGGCGCAGGGAGCGTGCAAGGGCAAGTCCCCG +
Preference number: 6 (lower is better)
Translates to: IRENFFMVPPAS*RAQGACKGKSP
Trigger: CGGGGACTTGCCCTTGCACGCTCCCTGCGCCCTCCAGCTCGCCGGCGGGACCATGAAGAAGTTCTCTCGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS TCA 72 bp ACATACATTCGCTTCAATGCACATCGGATTCCACCGTaGGTACGCACGAGGAAAACTGTGGAGAATCCACCT +
Preference number: 6 (lower is better)
Translates to: TYIRFNAHRIPP*VRTRKTVENPP
Trigger: AGGTGGATTCTCCACAGTTTTCCTCGTGCGTACTCACGGTGGAATCCGATGTGCATTGAAGCGAATGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS GCA 72 bp GAGGTCTGGCATGTTATTGACATACATTCGCTTCAATaGACATCGGATTCCACCGTGAGTACGCACGAGGAA +
Preference number: 6 (lower is better)
Translates to: EVWHVIDIHSLQ*TSDSTVSTHEE
Trigger: TTCCTCGTGCGTACTCACGGTGGAATCCGATGTGCATTGAAGCGAATGTATGTCAATAACATGCCAGACCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS CCA 72 bp GATGAGGTTGGCGGGGCTCTATTACCTTTTGGTCTATaGTTACCGAATTCACCAGGAGCAAGGACTTTAACA +
Preference number: 6 (lower is better)
Translates to: DEVGGALLPFGL*LPNSPGARTLT
Trigger: TGTTAAAGTCCTTGCTCCTGGTGAATTCGGTAACCATAGACCAAAAGGTAATAGAGCCCCGCCAACCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505725.1
CDS CAA 72 bp TTTAAGAGGATGAGGTTGGCGGGGCTCTATTACCTTTaGGTCTATGGTTACCGAATTCACCAGGAGCAAGGA +
Preference number: 6 (lower is better)
Translates to: FKRMRLAGLYYL*VYGYRIHQEQG
Trigger: TCCTTGCTCCTGGTGAATTCGGTAACCATAGACCAAAAGGTAATAGAGCCCCGCCAACCTCATCCTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505725.1
CDS TCA 72 bp TCTGGGATGGTGAAGTTGCCATCACAGATAGCAACCTaGCTCTCACCAAAAGGAAGAGTGAAGAAACAAAGT +
Preference number: 6 (lower is better)
Translates to: SGMVKLPSQIAT*LSPKGRVKKQS
Trigger: ACTTTGTTTCTTCACTCTTCCTTTTGGTGAGAGTCAGGTTGCTATCTGTGATGGCAACTTCACCATCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
ENST00000505725.1
CDS TCA 72 bp GGTTCTGTAAAACCCGTCTGTAGCTTCTTATTCATTTaGTTCACTACCTGTCCAGCTCGACAATATTCCATT +
Preference number: 6 (lower is better)
Translates to: GSVKPVCSFLFI*FTTCPARQYSI
Trigger: AATGGAATATTGTCGAGCTGGACAGGTAGTGAATCAAATGAATAAGAAGCTACAGACGGGTTTTACAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS CCA 72 bp ATGAAAGGAACAGAACCAAAAGGATCTTCTGGAGGATaGTTATGTGGAGCAGAAAGTGAGTCTACATTCTTA +
Preference number: 6 (lower is better)
Translates to: MKGTEPKGSSGG*LCGAESESTFL
Trigger: TAAGAATGTAGACTCACTTTCTGCTCCACATAACCATCCTCCAGAAGATCCTTTTGGTTCTGTTCCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502613.3
CDS TCA 72 bp GTGCTCCGTGTCTCAGTAATTGTTTACAACACTTATTaGTGTTGGAGACTGGACAATCCTTTTTGGCAAATT +
Preference number: 6 (lower is better)
Translates to: VLRVSVIVYNTY*CWRLDNPFWQI
Trigger: AATTTGCCAAAAAGGATTGTCCAGTCTCCAACATCAATAAGTGTTGTAAACAATTACTGAGACACGGAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS CAA 72 bp ATTTCCCTTTTACAAACATTGAGGTCTGGCATGTTATaGACATACATTCGCTTCAATGCACATCGGATTCCA +
Preference number: 6 (lower is better)
Translates to: ISLLQTLRSGML*TYIRFNAHRIP
Trigger: TGGAATCCGATGTGCATTGAAGCGAATGTATGTCAATAACATGCCAGACCTCAATGTTTGTAAAAGGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS CAA 72 bp AGTGCTCCGTGTCTCAGTAATTGTTTACAACACTTATaGATGTTGGAGACTGGACAATCCTTTTTGGCAAAT +
Preference number: 6 (lower is better)
Translates to: SAPCLSNCLQHL*MLETGQSFLAN
Trigger: ATTTGCCAAAAAGGATTGTCCAGTCTCCAACATCAATAAGTGTTGTAAACAATTACTGAGACACGGAGCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS CAA 90 bp TCAGTTAACAGTGCTCCGTGTCTCAGTAATTGTTTACAACACTTATaGATGTTGGAGACTGGACAATCCTTTTTGGCAAATTTAAATGCA +
Preference number: 6 (lower is better)
Translates to: SVNSAPCLSNCLQHL*MLETGQSFLANLNA
Trigger: TGCATTTAAATTTGCCAAAAAGGATTGTCCAGTCTCCAACATCAATAAGTGTTGTAAACAATTACTGAGACACGGAGCACTGTTAACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389010.7
CDS CCA 72 bp CATAATTGTAATTTCCCTTTTACAAACATTGAGGTCTaGCATGTTATTGACATACATTCGCTTCAATGCACA +
Preference number: 6 (lower is better)
Translates to: HNCNFPFTNIEV*HVIDIHSLQCT
Trigger: TGTGCATTGAAGCGAATGTATGTCAATAACATGCCAGACCTCAATGTTTGTAAAAGGGAAATTACAATTATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5
CDS CAA 72 bp AGCTCTTTCATAATTGTAATTTCCCTTTTACAAACATaGAGGTCTGGCATGTTATTGACATACATTCGCTTC +
Preference number: 6 (lower is better)
Translates to: SSFIIVISLLQT*RSGMLLTYIRF
Trigger: GAAGCGAATGTATGTCAATAACATGCCAGACCTCAATGTTTGTAAAAGGGAAATTACAATTATGAAAGAGCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389010.7
ENST00000502613.3
ENST00000502871.5