RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BMP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000168487

Ensembl transcript IDs: ENST00000306349.13, ENST00000306385.10, ENST00000354870.5, ENST00000397814.7, ENST00000471755.5, ENST00000483364.5, ENST00000518656.5, ENST00000518913.5, ENST00000520626.6, ENST00000520970.5, ENST00000520982.5, ENST00000521385.5, ENST00000521521.5, ENST00000522332.1, ENST00000523457.5, ENST00000523749.5, ENST00000523849.1

Found 1734 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCC +
Preference number: 1 (lower is better)
Translates to: AGTCGCLWPGRARAS*SHRSGRGRGPWRLA
Trigger: GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR CCA 90 bp TGCAGGGCTGAGGTTGGGATGCCCCAGGGGAAGTGGAGGCCTGGCTaGACTTTCTCCCACCGGGACAGAGCAACAGCTGGCAGAGCTGGC +
Preference number: 1 (lower is better)
Translates to: CRAEVGMPQGKWRPG*TFSHRDRATAGRAG
Trigger: GCCAGCTCTGCCAGCTGTTGCTCTGTCCCGGTGGGAGAAAGTCCAGCCAGGCCTCCACTTCCCCTGGGGCATCCCAACCTCAGCCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR TCA 90 bp TGTGGCGTGGGAGGCCTGGAAGCCCTTTCGCTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGG +
Preference number: 1 (lower is better)
Translates to: CGVGGLEALSLDRVI*VEAQEHAAACGQDG
Trigger: CCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAGCGAAAGGGCTTCCAGGCCTCCCACGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR GCA 90 bp ATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAAC +
Preference number: 1 (lower is better)
Translates to: IQSRRPRAAGSSPRP*SGSGHFLLWSVSWN
Trigger: GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGA +
Preference number: 1 (lower is better)
Translates to: GPSYLSRSAGTCGCL*PGRARASCSHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR TCA 90 bp TTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTaGGAGAAGCCCTGTCTTGTTTCTCCATCCCCTCCCCATCGGCTC +
Preference number: 1 (lower is better)
Translates to: FIGCGALVWLTGHWA*EKPCLVSPSPPHRL
Trigger: GAGCCGATGGGGAGGGGATGGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR GCA 90 bp AGCCCTTTCGCTGGACCGAGTTATCTGAGTAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCCAC +
Preference number: 1 (lower is better)
Translates to: SPFAGPSYLSRSAGT*GCLWPGRARASCSH
Trigger: GTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAGCGAAAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR GCA 90 bp TTCGCTGGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGC +
Preference number: 1 (lower is better)
Translates to: FAGPSYLSRSAGTCG*LWPGRARASCSHRS
Trigger: GCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAGCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR TCA 90 bp CTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAATGGGAGGTTTCACCCCGTTCACCT +
Preference number: 1 (lower is better)
Translates to: LGTCKACGLGQCPPC*AVSFGQWEVSPRSP
Trigger: AGGTGAACGGGGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR TCA 90 bp GGCTGTAACACTTTCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCAT +
Preference number: 1 (lower is better)
Translates to: GCNTFGLLAAVPWCG*PATGPERSPVLFLH
Trigger: ATGGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGAAAGTGTTACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520970.5
3UTR GCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAA +
Preference number: 1 (lower is better)
Translates to: VETQGWRWGPADIPS*HQAGPPKRGMMTSK
Trigger: TTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR CCA 90 bp TCCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGC +
Preference number: 1 (lower is better)
Translates to: SARCRLCWAGNRLGS*AIECGHSPFSHHPR
Trigger: GCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 90 bp TCCTGTCCAGCAGAGGGCCTGGTGAATGGAGGACTCAAGGGAACATaGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAG +
Preference number: 1 (lower is better)
Translates to: SCPAEGLVNGGLKGT*EGSTISRATAEKEQ
Trigger: CTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTTGAGTCCTCCATTCACCAGGCCCTCTGCTGGACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR TCA 90 bp TATCCAGGAAGATGCCCCTGGAGAATGTGTTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCT +
Preference number: 1 (lower is better)
Translates to: YPGRCPWRMCSERNA*CCRSHRSPPGTPPP
Trigger: AGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATCATGCATTACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR TCA 90 bp AATGGGGAGGGTCTCAGGAAGAGTCCTGTCCAGCAGAGGGCCTGGTaGATGGAGGACTCAAGGGAACATGGGAAGGAAGCACCATTTCTA +
Preference number: 1 (lower is better)
Translates to: NGEGLRKSPVQQRAW*MEDSREHGKEAPFL
Trigger: TAGAAATGGTGCTTCCTTCCCATGTTCCCTTGAGTCCTCCATTCACCAGGCCCTCTGCTGGACAGGACTCTTCCTGAGACCCTCCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR GCA 90 bp GAGGAGGATGGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTaGTTACTGGACAGATGGACAAGTGGAAAAATAGACACATGGACA +
Preference number: 1 (lower is better)
Translates to: EEDGGPSGPAWVTIT*LLDRWTSGKIDTWT
Trigger: TGTCCATGTGTCTATTTTTCCACTTGTCCATCTGTCCAGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCCATCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR CCA 90 bp GTGTCCTTTGGCCAATGGGAGGTTTCACCCCGTTCACCTCATACTTaGGGACAATGGTATCCAGGAAGATGCCCCTGGAGAATGTGTTCC +
Preference number: 1 (lower is better)
Translates to: VSFGQWEVSPRSPHT*GQWYPGRCPWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCATTGTCCCCAAGTATGAGGTGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 90 bp CACCTGGATCCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATC +
Preference number: 1 (lower is better)
Translates to: HLDPPDADFAGPVIV*VVGRLNVAIVLFHI
Trigger: GATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CAA 90 bp CGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTaGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGC +
Preference number: 2 (lower is better)
Translates to: RRNMRLPVARTGSGF*LPQKRPRTGALASR
Trigger: GCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR GCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTACCCGGTGCCCGGGGGTaGTGGAGATGGCCCACGTGC +
Preference number: 2 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLPGARG*WRWPTC
Trigger: GCACGTGGGCCATCTCCAGCACCCCCGGGCACCGGG...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTTGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR TCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: SAGTCGCLWPGRARASCSVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: RASCSHRSGRGRGPWRLARGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR GCA 90 bp CGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGTGGTCGGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 2 (lower is better)
Translates to: RPRTGALASRPSNTSRWSGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...CGACCACCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCGGTCCAAAGGGGCACTaGATCCAGCAGGACCAGCTG +
Preference number: 2 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGAGPKGH*IQQDQL
Trigger: CAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACC...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGTGGTCGCCCCACGGTGGCTCCTaGGGGACATGCACAGACACT +
Preference number: 2 (lower is better)
Translates to: RPRTGALASRPSNTSRWSPHGGS*GTCTDT
Trigger: AGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGGG...CGACCACCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACA +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRRGRGP*RLARRT
Trigger: TGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCG...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 2 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCCGTAGGAGCAGCACCTaGAGGGCGGGGCCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: SAGTCGCLWPGRARASCSRRSST*RAGPAQ
Trigger: CTGAGCTGGCCCCGCCCTCCAGGTGCTGCTCCTACG...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 2 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCGCTGGCCAGGCCAGGTaGCCGGGAGTGGGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: PGVADRPLGLREALSCFSAGQAR*PGVGGQ
Trigger: CTGGCCTCCCACTCCCGGCCACCTGGCCTGGCCAGC...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR TCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 2 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGTGGTCGTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: RPRTGALASRPSNTSRWSWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...CGACCACCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTGTTTATTGGCTGCGGTaGCCTGGTGTGGCTGACCGG +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASVYWLR*PGVADR
Trigger: CCGGTCAGCCACACCAGGGCACCGCAGCCAATAAAC...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTTCGGTTTATTGGCTaGGGTGCCCTGGTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGAFRFIG*GALVWL
Trigger: CAGCCACACCAGGGCACCGCAGCCAATAAACCGAAA...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 2 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTACTTGGTCTTCACGTCTaGCCGTACCTGGCCCCCGCA +
Preference number: 2 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLLGLHV*PYLAPA
Trigger: TGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAG...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 2 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGAFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCGGCCAGAGGGAGGTaGGCCGGAATGGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGPARGR*AGMAEW
Trigger: CCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGG...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGCCGCACTCTGTGGCGTaGGAGGCCTGGAAGCCCTTT +
Preference number: 2 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRPHSVA*EAWKPF
Trigger: AAAGGGCTTCCAGGCCTCCCACGCCACAGAGTGCGG...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTACGTCTGCCCGTACCTaGCCCCCGCACTCTGTGGCG +
Preference number: 2 (lower is better)
Translates to: SRSAGTCGCLWPGRARASTSART*PPHSVA
Trigger: CGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGT...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR TCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGGCCAGTTGGGGCTGGTaGTGGTACCACTGGTGGATG +
Preference number: 2 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRASWGW*WYHWWM
Trigger: CATCCACCAGTGGTACCATCACCAGCCCCAACTGGC...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 2 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
66% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACCCCGGTGCCCGGGGGTaGTGGAGATGGCCCACGTGC +
Preference number: 2 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDPGARG*WRWPTC
Trigger: GCACGTGGGCCATCTCCAGCACCCCCGGGCACCGGG...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGTCAGCTTGACCCGGTaGCCGGGGGTGCTGGAGATG +
Preference number: 2 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHVSLTR*PGVLEM
Trigger: CATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGAC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 2 (lower is better)
Translates to: RASCSHRSGRGRGPWRLADLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 2 (lower is better)
Translates to: LRCPGVADRPLGLREALSGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp GGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGCTGAGCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: GQATRGSKGALHPAGPAEQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...CTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGTCTCACCAGGCCATTaGCCCTGCAGGTCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRVSPGH*PCRSWG
Trigger: GCCCCAGGACCTGCAGGGCCAATGGCCTGGTGAGAC...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 2 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GAGAACGCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 2 (lower is better)
Translates to: ENAWLDVLTNDGNVAVPVSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...GACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGCGTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR-3UTR TCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 2 (lower is better)
Translates to: SAGTCGCLWPGRARASCSQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 2 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGGCTCCTGGGGGACATaGACAGACACTTGTGCCCCA +
Preference number: 2 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGGSWGT*TDTCAP
Trigger: TGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCC...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 2 (lower is better)
Translates to: RREHQFCPARGRWAGMAEVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp CTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTGGTCCAAAGGGGCACTaGATCCAGCAGGACCAGCTG +
Preference number: 2 (lower is better)
Translates to: LSRSAGTCGCLWPGRARAGPKGH*IQQDQL
Trigger: CAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACC...AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGGGGTTTGTGGGGAAGTaGCTTATGCCGGAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: WLRCPGVADRPLGLREALGFVGK*LMPESS
Trigger: ACTGGACTCCGGCATAAGCCACTTCCCCACAAACCC...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTGGGTTTGTGGGGAAGTaGCTTATGCCGGAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASGFVGK*LMPESS
Trigger: ACTGGACTCCGGCATAAGCCACTTCCCCACAAACCC...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGCCCAGGAAACTGGGGTaGTGGAATGGGGGCTCAAAA +
Preference number: 2 (lower is better)
Translates to: WLRCPGVADRPLGLREALPRKLG*WNGGSK
Trigger: TTTTGAGCCCCCATTCCACCACCCCAGTTTCCTGGG...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACTGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: RVETQGWRWGPADIPSCHCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp AGAGGAGGATGGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTGCTTACTTGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: RGGWGSERTSMGHHYLLTCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...AGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCCATCCTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATCCGGCCAGAGGGAGGTaGGCCGGAATGGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDPARGR*AGMAEW
Trigger: CCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGG...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 2 (lower is better)
Translates to: RDVAARRLRDLPLHLPQAPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCCGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACA +
Preference number: 2 (lower is better)
Translates to: WLMPESSSPTSYGQSHQARGRGP*RLARRT
Trigger: TGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCG...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 2 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGATCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 2 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 2 (lower is better)
Translates to: SAGTCGCLWPGRARASCSLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 2 (lower is better)
Translates to: LLIATVAPDEGAALTVPVTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 2 (lower is better)
Translates to: GPVRDELEPEAAGRALDVTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: LGLVMVPLVDVTLWSQPAAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...AGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 2 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCGGCCAGAGGGAGGTaGGCCGGAATGGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVPARGR*AGMAEW
Trigger: CCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGG...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 2 (lower is better)
Translates to: QKRPRTGALASRPSNTSRVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 2 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 2 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TCAGGAAGTTATACTCCTGCCCTGAGGGTCCGGGGAGCAGCCAAGGGGAGCCTGCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 2 (lower is better)
Translates to: SGSYTPALRVRGAAKGSLQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...CAGGCTCCCCTTGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAACTTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR-3UTR CCA 90 bp TCAGGAAGTTATACTCCTGCCCTGAGGGTCCGGGGAGCAGCCAAGGGGAGCCTGCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 2 (lower is better)
Translates to: SGSYTPALRVRGAAKGSLRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...CAGGCTCCCCTTGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAACTTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR-3UTR CCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 2 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR TCA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAACACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 2 (lower is better)
Translates to: GVLLTFPLATRQGPLREEHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR TCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 2 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATCGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 2 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 2 (lower is better)
Translates to: RREHQFCPARGRWAGMAEAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR TCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGAACTGCCGAACGTGTTaGCGCAGTCCTGCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: RREHQFCPARGRWAGMAENCRTC*RSPAGS
Trigger: GCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGTT...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR TCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 2 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp AAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 2 (lower is better)
Translates to: KWLMPESSSPTSYGQSHQGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...CTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 2 (lower is better)
Translates to: REVQDDLLPGCDRDAPHAGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...TGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: WLMPESSSPTSYGQSHQAVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 2 (lower is better)
Translates to: RDVAARRLRDLPLHLPQAWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 2 (lower is better)
Translates to: QKRPRTGALASRPSNTSRFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCTGGAGATGGCCCACGTaGACTCCTTCTTGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGWRWPT*TPSCWD
Trigger: ATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCA...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 2 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVRARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR GCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCGAAGGTGGCATCGTCTaGGGGGAGCCCCTGCCATGG +
Preference number: 2 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGEGGIV*GEPLPW
Trigger: CCATGGCAGGGGCTCCCCGCAGACGATGCCACCTTC...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR GCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACGGGCTGAGGTTGGGATaGCCCAGGGGAAGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDGLRLG*PRGSGG
Trigger: GCCTCCACTTCCCCTGGGGCATCCCAACCTCAGCCC...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAACAGACACCATCAAAATaGGAGGGGGTAGGGCACGGG +
Preference number: 2 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKQTPSK*EGVGHG
Trigger: CCCGTGCCCTACCCCCTCCCATTTTGATGGTGTCTG...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCCAGACACCATCAAAATaGGAGGGGGTAGGGCACGGG +
Preference number: 2 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAQTPSK*EGVGHG
Trigger: CCCGTGCCCTACCCCCTCCCATTTTGATGGTGTCTG...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCTGGAACTTGGTGCTaGTGTATCGCAGGTGGAAAC +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRPGTWC*CIAGGN
Trigger: GTTTCCACCTGCGATACACCAGCACCAAGTTCCAGG...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCAGGGGAGCCCCTGCCATaGGGAAGGGCTGAGATGTGG +
Preference number: 2 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVAGEPLP*GRAEMW
Trigger: CCACATCTCAGCCCTTCCCCATGGCAGGGGCTCCCC...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCAAGTGGAGGCCTGGCTaGACTTTCTCCCACCGGGAC +
Preference number: 2 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPKWRPG*TFSHRD
Trigger: GTCCCGGTGGGAGAAAGTCCAGCCAGGCCTCCACTT...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR TCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATGCGATGGGGTCCTGCTaGCATTCCCTCTTGCCACCA +
Preference number: 2 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDAMGSC*HSLLPP
Trigger: TGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGC...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR TCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTGCCATGGGGAAGGGCTaGGATGTGGGCTGGGATGCA +
Preference number: 2 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSAMGKG*DVGWDA
Trigger: TGCATCCCAGCCCACATCTCAGCCCTTCCCCATGGC...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR TCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGCGATGTCCATCTCCATaGAGGTCTTCTTTGCAGTCG +
Preference number: 2 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRRCPSP*RSSLQS
Trigger: CGACTGCAAAGAAGACCTTCATGGAGATGGACATCG...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520970.5
3UTR-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACATGCACAGACACTTGTaGCCCAGGAAACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNMHRHL*PRKLGW
Trigger: CCACCCCAGTTTCCTGGGGCACAAGTGTCTGTGCAT...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCAGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTGGAGGACGAAGCCACTaGGGCATTGGCACTCATAAC +
Preference number: 2 (lower is better)
Translates to: SRSAGTCGCLWPGRARASGGRSH*GIGTHN
Trigger: GTTATGAGTGCCAATGCCGCAGTGGCTTCGTCCTCC...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGGAGGACGAAGCCACTaGGGCATTGGCACTCATAAC +
Preference number: 2 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHGGRSH*GIGTHN
Trigger: GTTATGAGTGCCAATGCCGCAGTGGCTTCGTCCTCC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp AGAGGAGGATGGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTGCTTACTTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTC +
Preference number: 2 (lower is better)
Translates to: RGGWGSERTSMGHHYLLTSSPRP*SGSGHF
Trigger: GAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGA...AGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCCATCCTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 2 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 2 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASNRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: SAGTCGCLWPGRARASCSSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 2 (lower is better)
Translates to: RVETQGWRWGPADIPSCHTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR CAA 90 bp TTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTGGCCAATGGG +
Preference number: 2 (lower is better)
Translates to: LQGLSTGWALVKLAG*GNVPLAEPCPLANG
Trigger: CCCATTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 2 (lower is better)
Translates to: LLIATVAPDEGAALTVPVQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 2 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACAGAAGAAGTGGGCCTTaGAGCCCTTTTTGGACACGG +
Preference number: 2 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHRRSGP*SPFWTR
Trigger: CCGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCT...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAATGCACAGACACTTGTaGCCCAGGAAACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAMHRHL*PRKLGW
Trigger: CCACCCCAGTTTCCTGGGGCACAAGTGTCTGTGCAT...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GCGGCTGGACGTGCTCTTGATGTCATCAGGCTTCTCATAGCCACAGTAGCGCCCCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 2 (lower is better)
Translates to: AAGRALDVIRLLIATVAPPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...GGGCGCTACTGTGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAACCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGCTTCTTTGCAGTCGTaGTTGTTGTCATGGAGGACG +
Preference number: 2 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGASLQS*LLSWRT
Trigger: CGTCCTCCATGACAACAAGCACGACTGCAAAGAAGC...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp TACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGCTCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 2 (lower is better)
Translates to: YHWWMSPCGHSRLLCSRARARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...AGCACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TGGCCAATGGGAGGTTTCACCCCGTTCACCTCATACTTGGGGACAATGGTATCCGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: WPMGGFTPFTSYLGTMVSAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...GGATACCATTGTCCCCAAGTATGAGGTGAACGGGGTGAAACCTCCCATTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGAGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 2 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCGTAGAGACACAGGGATaGCGATGGGGTCCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGVETQG*RWGPAD
Trigger: GTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCACCCAGGAAACTGGGGTaGTGGAATGGGGGCTCAAAA +
Preference number: 2 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAPRKLG*WNGGSK
Trigger: TTTTGAGCCCCCATTCCACCACCCCAGTTTCCTGGG...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: SRSAGTCGCLWPGRARASRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 2 (lower is better)
Translates to: GPVRDELEPEAAGRALDVNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCAAAGATGGGGAGCCTGTaGACTCCCCAAGGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVAKMGSL*TPQGSG
Trigger: CCCTGAGCCTTGGGGAGTCCACAGGCTCCCCATCTT...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 2 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCACGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 2 (lower is better)
Translates to: REVQDDLLPGCDRDAPHARTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...TGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAATCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 2 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCTTTCGGTTTATTGGCTaGGGTGCCCTGGTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: WLMPESSSPTSYGQSHQAFRFIG*GALVWL
Trigger: CAGCCACACCAGGGCACCGCAGCCAATAAACCGAAA...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: LLIATVAPDEGAALTVPVGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: GPVRDELEPEAAGRALDVGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAACAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 2 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 2 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCGGTCCTGGGAGGTaGAGGAAAGGGAGCAGCTCG +
Preference number: 2 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGGGPGR*RKGSSS
Trigger: CGAGCTGCTCCCTTTCCTGCACCTCCCAGGACCGCC...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 2 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATGTAGAGACACAGGGATaGCGATGGGGTCCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHVETQG*RWGPAD
Trigger: GTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 2 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 2 (lower is better)
Translates to: PGGAGDGPRALLLAGILVVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 2 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGCTCGGGGGTGCTGGAGATaGCCCACGTGCACTCCTTCT +
Preference number: 2 (lower is better)
Translates to: YHWWMSPCGHSRLLCSRARGCWR*PTCTPS
Trigger: AGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCG...AGCACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGGAGGCAGGGTGGCCTaGGTGTCCTCAGGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWGGRVA*VSSGVG
Trigger: GCCCACCCCTGAGGACACCCAGGCCACCCTGCCTCC...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp TGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGTGGGGAGAGGAGGATaGGGGTCCGAGCGGACCAGC +
Preference number: 2 (lower is better)
Translates to: WVVGRLNVAIVLFHITPAVGRGG*GSERTS
Trigger: GCTGGTCCGCTCGGACCCCCATCCTCCTCTCCCCAC...TGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp CATCTCCATGAAGGTCTTCTTTGCAGTCGTGCTTGTTGTCATGGAGGACGAAGCCCAGGTGGCCGGGAGTaGGAGGCCAGGCGACAAGGG +
Preference number: 2 (lower is better)
Translates to: HLHEGLLCSRACCHGGRSPGGRE*EARRQG
Trigger: CCCTTGTCGCCTGGCCTCCCACTCCCGGCCACCTGG...GCTTCGTCCTCCATGACAACAAGCACGACTGCAAAGAAGACCTTCATGGAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520970.5
3UTR-3UTR CCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATCGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 2 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR TCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCATCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 2 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRASERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 2 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCACTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 2 (lower is better)
Translates to: ETQGWRWGPADIPSCHQALELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGATGCACAGACACTTGTaGCCCAGGAAACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PPDADFAGPVIVWVVGRLMHRHL*PRKLGW
Trigger: CCACCCCAGTTTCCTGGGGCACAAGTGTCTGTGCAT...CAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp AGGCCAGTTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: RPVGAGDGTTGGCHLVVTVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...TGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAACTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTCACAGCCGGCTTCTTTaGAGTCGTGCTTGTTGTCAT +
Preference number: 2 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTHSRLL*SRACCH
Trigger: ATGACAACAAGCACGACTGCAAAGAAGCCGGCTGTG...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGAAGTTATACTCCTGCCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 2 (lower is better)
Translates to: GSYTPALAGCSHERWKRGGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...GCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AAAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: KGAGRRGPSFTSQQEMSQAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...CTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 2 (lower is better)
Translates to: VETQGWRWGPADIPSCHQFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTACACAGGGATGGCGATaGGGTCCTGCTGACATTCCC +
Preference number: 2 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLTQGWR*GPADIP
Trigger: GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCCCAGGAAACTGGGGTaGTGGAATGGGGGCTCAAAA +
Preference number: 2 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAPRKLG*WNGGSK
Trigger: TTTTGAGCCCCCATTCCACCACCCCAGTTTCCTGGG...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 2 (lower is better)
Translates to: TGWALVKLAGLGNVPLAELSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 2 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 2 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 2 (lower is better)
Translates to: GPVRDELEPEAAGRALDVGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGATGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 2 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp TGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGCCAGTTGGGGCTGGTaGTGGTACCACTGGTGGATG +
Preference number: 2 (lower is better)
Translates to: CHQAGPPKRGMMTSKCLVASWGW*WYHWWM
Trigger: CATCCACCAGTGGTACCATCACCAGCCCCAACTGGC...CACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 2 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 2 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 2 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 2 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGGTCACCATTACCTaGTTACTGGACAGATGGACA +
Preference number: 2 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTWVTIT*LLDRWT
Trigger: TGTCCATCTGTCCAGTAAGCAGGTAATGGTGACCCA...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCATCTTCTTTGCAGTCGTaGTTGTTGTCATGGAGGACG +
Preference number: 2 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRASSLQS*LLSWRT
Trigger: CGTCCTCCATGACAACAAGCACGACTGCAAAGAAGA...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520970.5
3UTR-3UTR CCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACCTTCGAAATGTCTTGTaGAAGCTCTGCTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDLRNVL*KLCSLA
Trigger: GGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAG...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 2 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GACGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 2 (lower is better)
Translates to: DVKFRMIFSPGVTEMRHTPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCCATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 2 (lower is better)
Translates to: GPVRDELEPEAAGRALDVHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 2 (lower is better)
Translates to: REVQDDLLPGCDRDAPHAGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...TGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGAGGGAGTAAAGGTCCTTaGTCTTCACGTCTGCCCGTA +
Preference number: 2 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGGSKGP*SSRLPV
Trigger: TACGGGCAGACGTGAAGACCAAGGACCTTTACTCCC...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACCCTGGAACTTGGTGCTaGTGTATCGCAGGTGGAAAC +
Preference number: 2 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDPGTWC*CIAGGN
Trigger: GTTTCCACCTGCGATACACCAGCACCAAGTTCCAGG...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTGTGTCTGGTCCCTCTaGGGCGGACGGGAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRCVWSL*GGREEA
Trigger: TGCCTCCTCCCGTCCGCCCCAGAGGGACCAGACACA...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACGGGGACAAGGAAGGTaGCATCGTCTGCGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVRGQGR*HRLRGA
Trigger: GGCTCCCCGCAGACGATGCCACCTTCCTTGTCCCCG...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 2 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGAGGTAGAAGTGTTTCCTaGAACTGCAGCTTTGATGGA +
Preference number: 2 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRGRSVS*NCSFDG
Trigger: TCCATCAAAGCTGCAGTTCCAGGAAACACTTCTACC...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR TCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 2 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR TCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACAT +
Preference number: 2 (lower is better)
Translates to: RVETQGWRWGPADIPSCHLDRVI*VEAQEH
Trigger: ATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAG...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 2 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 2 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TTGGAGCACTCGTCCTTGTCTGCAGGGGAGCAAATAAGGGCAGACGCTGGGTCTCTTCGAAATGTCTTGTaGAAGCTCTGCTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: LEHSSLSAGEQIRADAGSLRNVL*KLCSLA
Trigger: GGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAG...AGACCCAGCGTCTGCCCTTATTTGCTCCCCTGCAGACAAGGACGAGTGCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTCATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 2 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 2 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTTACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 2 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CAA 90 bp GATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGC +
Preference number: 2 (lower is better)
Translates to: DADFAGPVIVWVVGR*NVAIVLFHITPADG
Trigger: GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGCGATGGGGTCCTGCTaGCATTCCCTCTTGCCACCA +
Preference number: 2 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWAMGSC*HSLLPP
Trigger: TGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGC...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR TCA 90 bp CTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTGTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 2 (lower is better)
Translates to: LVKLAGLGNVPLAEPCPLSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...CAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp GGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: GAGRRGPSFTSQQEMSQTQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...TGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp GGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACATGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: GAGRRGPSFTSQQEMSQTWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...TGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 2 (lower is better)
Translates to: VGRLNVAIVLFHITPADGLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 2 (lower is better)
Translates to: PPDADFAGPVIVWVVGRLDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...CAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: PGGAGDGPRALLLAGILVTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGGGTTTGTGGGGAAGTaGCTTATGCCGGAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: CHQAGPPKRGMMTSKCLVGFVGK*LMPESS
Trigger: ACTGGACTCCGGCATAAGCCACTTCCCCACAAACCC...CACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 2 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp ACAATACAGCGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCCTTCGAAATGTCTTGTaGAAGCTCTGCTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: TIQRVETQGWRWGPADIPLRNVL*KLCSLA
Trigger: GGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAG...GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAAACACAGGGATGGCGATaGGGTCCTGCTGACATTCCC +
Preference number: 2 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQTQGWR*GPADIP
Trigger: GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 2 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 2 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 2 (lower is better)
Translates to: VETQGWRWGPADIPSCHQRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSREQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GCGGCTGGACGTGCTCTTGATGTCATCAGGCTTCTCATAGCCACAGTAGCGCCCAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: AAGRALDVIRLLIATVAPNRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...GGGCGCTACTGTGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGCTGTGGATGTCACCTTGTaGTCACAGCCGGCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: YHWWMSPCGHSRLLCSRAVDVTL*SQPASL
Trigger: CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCAC...AGCACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAGGGTGTCCTCAGGGGTaGGCCTGTAGGGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKGCPQG*ACREEW
Trigger: CCACTCCTCCCTACAGGCCCACCCCTGAGGACACCC...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGTTATACTCCTGCCCTaGCTGGATGTTCTCACGAAC +
Preference number: 2 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLVILLP*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAAC...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CATCTCCATGAAGGTCTTCTTTGCAGTCGTGCTTGTTGTCATGGAGGACGAAGCAAGTGGAGGCCTGGCTaGACTTTCTCCCACCGGGAC +
Preference number: 2 (lower is better)
Translates to: HLHEGLLCSRACCHGGRSKWRPG*TFSHRD
Trigger: GTCCCGGTGGGAGAAAGTCCAGCCAGGCCTCCACTT...GCTTCGTCCTCCATGACAACAAGCACGACTGCAAAGAAGACCTTCATGGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520970.5
3UTR-3UTR TCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 2 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGTCCTCCAAGAGGGAGTaGGCGGGAATAAGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWSSKRE*AGIRGS
Trigger: TGAGCCCCTTATTCCCGCTCACTCCCTCTTGGAGGA...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR GCA 90 bp ACAATACAGCGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 2 (lower is better)
Translates to: TIQRVETQGWRWGPADIPWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: LVMVPLVDVTLWSQPASLQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGAAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 2 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGSVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCCTTCGAAATGTCTTGTaGAAGCTCTGCTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: VGRLNVAIVLFHITPADGLRNVL*KLCSLA
Trigger: GGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAG...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 2 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GTTAATGGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 2 (lower is better)
Translates to: VNGPVRDELEPEAAGRALRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...AAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCCATTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 2 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 2 (lower is better)
Translates to: KGTWEGSTISRATAEKEQCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...CTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR-3UTR GCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 2 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 2 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGGTCCGGTTTCTTTTCTaGACTCGGAATTTGAGCTGG +
Preference number: 2 (lower is better)
Translates to: LVMVPLVDVTLWSQPASLVRFLF*TRNLSW
Trigger: CCAGCTCAAATTCCGAGTGCAGAAAAGAAACCGGAC...CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 2 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TCAAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCTGGAGAACGCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 2 (lower is better)
Translates to: SREHGKEAPFLEPQLRRSWRTPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGCGTTCTCCA...GCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR-3UTR CCA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAATACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 2 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAATGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 2 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 2 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 2 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 2 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 2 (lower is better)
Translates to: GAGRRGPSFTSQQEMSQTHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...TGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 2 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 2 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGTGCTTACTGGACAGATaGACAAGTGGAAAAATAGAC +
Preference number: 2 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVCLLDR*TSGKID
Trigger: GTCTATTTTTCCACTTGTCCATCTGTCCAGTAAGCA...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCTGGGTCACCATTACCTaGTTACTGGACAGATGGACA +
Preference number: 2 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPWVTIT*LLDRWT
Trigger: TGTCCATCTGTCCAGTAAGCAGGTAATGGTGACCCA...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 2 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 2 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 2 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCTACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 2 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGGTTATACTCCTGCCCTaGCTGGATGTTCTCACGAAC +
Preference number: 2 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRVILLP*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAAC...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 2 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 2 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 2 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 2 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR GCA 72 bp TGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: CGCLWPGRARAS*SHRSGRGRGPW
Trigger: CCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CAA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: SAGTCGCLWPGRARASCSERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR CCA 72 bp GACAAAGGGGATGACCCCATCGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCGCCGGCTACGGGATCT +
Preference number: 3 (lower is better)
Translates to: DKGDDPIGPHTL*SGRRRPPATGS
Trigger: AGATCCCGTAGCCGGCGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCCGATGGGGTCATCCCCTTTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CAA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR GCA 72 bp TGGGAGGCCAGGCGACAAGGGGGTCCAAAGGGGCACTaGATCCAGCAGGACCAGCTGAGCAGGGCCCAGCTG +
Preference number: 3 (lower is better)
Translates to: WEARRQGGPKGH*IQQDQLSRAQL
Trigger: CAGCTGGGCCCTGCTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTACCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 3 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR GCA 72 bp AGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTG +
Preference number: 3 (lower is better)
Translates to: RRPRAAGSSPRP*SGSGHFLLWSV
Trigger: CACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR CCA 72 bp TCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACACCTCTAGGTGGTCGT +
Preference number: 3 (lower is better)
Translates to: SCSHRSGRGRGP*RLARRTPLGGR
Trigger: ACGACCACCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR TCA 72 bp TGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTaGGAGAAGCCCTGTCTTGTTTCTCCATCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: CGALVWLTGHWA*EKPCLVSPSPP
Trigger: GGGAGGGGATGGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGGAGAGAAGCCCTGTCTaGTTTCTCCATCCCCTCCCC +
Preference number: 3 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRERSPV*FLHPLP
Trigger: GGGGAGGGGATGGAGAAACAAGACAGGGCTTCTCTC...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp CGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCAACACTTTCGGTTTATaGGCTGCGGTGCCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: RASCSHRSGRGRGPWRLANTFGL*AAVPWC
Trigger: ACACCAGGGCACCGCAGCCAATAAACCGAAAGTGTT...GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520970.5
3UTR-3UTR CAA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: GSGFLLPQKRPRTGALASRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCTCCATGAAGGTCAGCTaGACCCGGTGCCCGGGGGTG +
Preference number: 3 (lower is better)
Translates to: PGGAGDGPRALLLAGILVSMKVS*TRCPGV
Trigger: CACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGA...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR GCA 72 bp TCGATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTaGCCGGGGGTGCTGGAGATGGCCCACGTGCACTCC +
Preference number: 3 (lower is better)
Translates to: SMSISMKVSLTR*PGVLEMAHVHS
Trigger: GGAGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp GGCAGCAGGCTCCAGTCCCCGCCCCTGCTCAGGCAGTaGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTT +
Preference number: 3 (lower is better)
Translates to: GSRLQSPPLLRQ*SLPAVECVLEL
Trigger: AAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGAGCCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: CSHERWKRGGPGLAECVRERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTGAAGCCACTGCGGCATaGGCACTCATAACTGCCGAA +
Preference number: 3 (lower is better)
Translates to: LRCPGVADRPLGLREALSEATAA*ALITAE
Trigger: TTCGGCAGTTATGAGTGCCAATGCCGCAGTGGCTTC...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGAAGCCACTGCGGCATaGGCACTCATAACTGCCGAA +
Preference number: 3 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPREATAA*ALITAE
Trigger: TTCGGCAGTTATGAGTGCCAATGCCGCAGTGGCTTC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CAA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 3 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGCCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 3 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 3 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR GCA 72 bp CCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCC +
Preference number: 3 (lower is better)
Translates to: PSYLSRSAGTCG*LWPGRARASCS
Trigger: GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR GCA 72 bp GCTGGACCGAGTTATCTGAGTAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCT +
Preference number: 3 (lower is better)
Translates to: AGPSYLSRSAGT*GCLWPGRARAS
Trigger: AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR CCA 72 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCC +
Preference number: 3 (lower is better)
Translates to: VAYAGVQFPHLL*TVSPGHWPCRS
Trigger: GGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 3 (lower is better)
Translates to: SAGTCGCLWPGRARASCSWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 3 (lower is better)
Translates to: GSGFLLPQKRPRTGALASHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGTTCTGCACTCGGAATTaGAGCTGGTGGGGGCGTCCC +
Preference number: 3 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQFCTRN*SWWGRP
Trigger: GGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGAA...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR TCA 72 bp ACTTTCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTG +
Preference number: 3 (lower is better)
Translates to: TFGLLAAVPWCG*PATGPERSPVL
Trigger: CAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520970.5
3UTR TCA 72 bp GGAGGCCTGGAAGCCCTTTCGCTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGC +
Preference number: 3 (lower is better)
Translates to: GGLEALSLDRVI*VEAQEHAAACG
Trigger: GCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAGCGAAAGGGCTTCCAGGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR CCA 72 bp TATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGA +
Preference number: 3 (lower is better)
Translates to: YLSRSAGTCGCL*PGRARASCSHR
Trigger: TCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CAA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 3 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 3 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: GPVRDELEPEAAGRALDVVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GGCTGGGACTCGATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 3 (lower is better)
Translates to: GWDSMSISMKVSLTRCPGPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...CCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATCGAGTCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTCGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 3 (lower is better)
Translates to: CHQAGPPKRGMMTSKCLVASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...CACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 3 (lower is better)
Translates to: RREHQFCPARGRWAGMAEALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGAAGCCACTGCGGCATaGGCACTCATAACTGCCGAA +
Preference number: 3 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAEATAA*ALITAE
Trigger: TTCGGCAGTTATGAGTGCCAATGCCGCAGTGGCTTC...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CAA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCATCACAGCCGGCTTCTTaGCAGTCGTGCTTGTTGTCA +
Preference number: 3 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPSQPAS*QSCLLS
Trigger: TGACAACAAGCACGACTGCAAAGAAGCCGGCTGTGA...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACTTGGAGCACTCGTCCTaGTCTGCAGGGGAGCAAATA +
Preference number: 3 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHLEHSS*SAGEQI
Trigger: TATTTGCTCCCCTGCAGACAAGGACGAGTGCTCCAA...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CAA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTTGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTGATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 3 (lower is better)
Translates to: LVKLAGLGNVPLAEPCPLIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...CAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTTCACAGCCCCCGCGGTaGGGCCGAGAGCACTCGTCC +
Preference number: 3 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGSQPPR*GREHSS
Trigger: GGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGA...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAAGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 3 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 3 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 3 (lower is better)
Translates to: LGLVMVPLVDVTLWSQPALVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...AGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 3 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 3 (lower is better)
Translates to: GPVRDELEPEAAGRALDVPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGTGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GTTAATGGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTTCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 3 (lower is better)
Translates to: VNGPVRDELEPEAAGRALSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...AAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCCATTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 3 (lower is better)
Translates to: LGLVMVPLVDVTLWSQPAMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...AGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: PGGAGDGPRALLLAGILVSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGTACTTGTCAGGCCAGTaGGGGCTGGTGATGGTACCA +
Preference number: 3 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVYLSGQ*GLVMVP
Trigger: TGGTACCATCACCAGCCCCAACTGGCCTGACAAGTA...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTCACGTGCACTCCTTCTaGCTGGGATACTTGTCAGGC +
Preference number: 3 (lower is better)
Translates to: LGLVMVPLVDVTLWSQPAHVHSF*LGYLSG
Trigger: GCCTGACAAGTATCCCAGCAAGAAGGAGTGCACGTG...AGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACAGGTGGAAACCTTTTTaGGTGATGGTGTCATCCGAG +
Preference number: 3 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHRWKPF*VMVSSE
Trigger: CTCGGATGACACCATCACCAAAAAAGGTTTCCACCT...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCTTGGAGCACTCGTCCTaGTCTGCAGGGGAGCAAATA +
Preference number: 3 (lower is better)
Translates to: WLMPESSSPTSYGQSHQALEHSS*SAGEQI
Trigger: TATTTGCTCCCCTGCAGACAAGGACGAGTGCTCCAA...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATCCTGGAACTGCAGCTTaGATGGAGGACTTACGAGCT +
Preference number: 3 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDPGTAA*MEDLRA
Trigger: AGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAGG...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR TCA 72 bp TGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAATGGGAGGTTTCACCC +
Preference number: 3 (lower is better)
Translates to: CKACGLGQCPPC*AVSFGQWEVSP
Trigger: GGGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp GCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACCCCGTTCACCTCATAC +
Preference number: 3 (lower is better)
Translates to: AWAMSPLLSRVL*PMGGFTPFTSY
Trigger: GTATGAGGTGAACGGGGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 3 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 3 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 3 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAACCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 3 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 3 (lower is better)
Translates to: LGLVMVPLVDVTLWSQPAEKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...AGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGTCTTTGCAGTCGTGCTaGTTGTCATGGAGGACGAAG +
Preference number: 3 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLSLQSC*LSWRTK
Trigger: CTTCGTCCTCCATGACAACAAGCACGACTGCAAAGA...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR GCA 72 bp ATGACCTCGGGCTTCTCAGAACCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTGAGTCCACTGCGCACC +
Preference number: 3 (lower is better)
Translates to: MTSGFSEPQNLP*SLESAVSPLRT
Trigger: GGTGCGCAGTGGACTCACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTGAGAAGCCCGAGGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR GCA 72 bp GTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTaGTTGTTGTCATGGAGGACGAAGCCACTGCGGCAT +
Preference number: 3 (lower is better)
Translates to: VTLWSQPASLQS*LLSWRTKPLRH
Trigger: ATGCCGCAGTGGCTTCGTCCTCCATGACAACAAGCACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp CAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGATGCAGTTCTTGTTGG +
Preference number: 3 (lower is better)
Translates to: QRSQTAGRCGTG*GPPAARCSSCW
Trigger: CCAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp GGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTaGTCACAGCCGGCTTCTTTGCAGTCGTGCTTGTTG +
Preference number: 3 (lower is better)
Translates to: GLVMVPLVDVTL*SQPASLQSCLL
Trigger: CAACAAGCACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 3 (lower is better)
Translates to: VGRLNVAIVLFHITPADGAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAAGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 3 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCCACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 3 (lower is better)
Translates to: LLIATVAPDEGAALTVPVHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp TACACAATACAGCGTGTAGAGACACAGGGATGGCGATaGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCA +
Preference number: 3 (lower is better)
Translates to: YTIQRVETQGWR*GPADIPSCHQA
Trigger: TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR CCA 72 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTT +
Preference number: 3 (lower is better)
Translates to: PPDADFAGPVIV*VVGRLNVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp TCAGGAAGAGTCCTGTCCAGCAGAGGGCCTGGTGAATaGAGGACTCAAGGGAACATGGGAAGGAAGCACCAT +
Preference number: 3 (lower is better)
Translates to: SGRVLSSRGPGE*RTQGNMGRKHH
Trigger: ATGGTGCTTCCTTCCCATGTTCCCTTGAGTCCTCCATTCACCAGGCCCTCTGCTGGACAGGACTCTTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR-3UTR CAA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTATGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTAGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 3 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGTACTTGCACACATCATaGCCCTCTGTCTCAAAGAAG +
Preference number: 3 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQYLHTS*PSVSKK
Trigger: CTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTA...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTTCACAGCCGGCTTCTTaGCAGTCGTGCTTGTTGTCA +
Preference number: 3 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRSQPAS*QSCLLS
Trigger: TGACAACAAGCACGACTGCAAAGAAGCCGGCTGTGA...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR TCA 72 bp AGATGCCCCTGGAGAATGTGTTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGGTCTCCCCCAGGGACT +
Preference number: 3 (lower is better)
Translates to: RCPWRMCSERNA*CCRSHRSPPGT
Trigger: AGTCCCTGGGGGAGACCTATGACTTCGACAGCATCATGCATTACGCTCGGAACACATTCTCCAGGGGCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR GCA 72 bp GGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTaGTTACTGGACAGATGGACAAGTGGAAAAATAGAC +
Preference number: 3 (lower is better)
Translates to: GGPSGPAWVTIT*LLDRWTSGKID
Trigger: GTCTATTTTTCCACTTGTCCATCTGTCCAGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 3 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCACCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 3 (lower is better)
Translates to: WVVGRLNVAIVLFHITPAPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...TGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAATGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 3 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 3 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 3 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACCGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 3 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 3 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp TGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCATAGTCCTTTTTCACAT +
Preference number: 3 (lower is better)
Translates to: CRLCWAGNRLGS*AIECGHSPFSH
Trigger: ATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 3 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKEKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGGGCCCCCGCACTCTGTaGCGTGGGAGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: WLRCPGVADRPLGLREALGPRTL*RGRPGS
Trigger: GCTTCCAGGCCTCCCACGCCACAGAGTGCGGGGGCC...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR CAA 72 bp ATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTaGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: MRLPVARTGSGF*LPQKRPRTGAL
Trigger: CAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGARTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGGGTGCCCGGGGGTGCTaGAGATGGCCCACGTGCACT +
Preference number: 4 (lower is better)
Translates to: QKRPRTGALASRPSNTSRGARGC*RWPTCT
Trigger: AGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACC...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCGGCCCCCGCACTCTGTaGCGTGGGAGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPGPRTL*RGRPGS
Trigger: GCTTCCAGGCCTCCCACGCCACAGAGTGCGGGGGCC...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTATGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGAGGGAAGCGGCGCACTaGAGGCCAGGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRREAAH*RPGEGV
Trigger: GACGCCCTCCCCTGGCCTCCAGTGCGCCGCTTCCCT...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGCTGGCCAGGCCAGGTaGCCGGGAGTGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGAGQAR*PGVGGQ
Trigger: CTGGCCTCCCACTCCCGGCCACCTGGCCTGGCCAGC...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGCTGGCCAGGCCAGGTaGCCGGGAGTGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPAGQAR*PGVGGQ
Trigger: CTGGCCTCCCACTCCCGGCCACCTGGCCTGGCCAGC...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCAACTGCCGAACGTGTTaGCGCAGTCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGANCRTC*RSPAGS
Trigger: GCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGTT...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTGTCAGCTTGACCCGGTaGCCGGGGGTGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: RDVAARRLRDLPLHLPQAVSLTR*PGVLEM
Trigger: CATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGAC...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR GCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: WLRCPGVADRPLGLREALRARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: ESTSSVRPEGGGPEWQSGGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...TCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCACGTCTGCCCGTACCTaGCCCCCGCACTCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: SAGTCGCLWPGRARASCSTSART*PPHSVA
Trigger: CGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGT...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTGTCTCACCAGGCCATTaGCCCTGCAGGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GSGFLLPQKRPRTGALASVSPGH*PCRSWG
Trigger: GCCCCAGGACCTGCAGGGCCAATGGCCTGGTGAGAC...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGCTGAGCAGGGCCCAGTGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: QGGPKGHCIQQDQLSRAQCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...CTGGGCCCTGCTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGAQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGAVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCT +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPAGTCG*LWPGRA
Trigger: AGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGC...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTCTTGGTCTTCACGTCTaGCCGTACCTGGCCCCCGCA +
Preference number: 4 (lower is better)
Translates to: RDVAARRLRDLPLHLPQALGLHV*PYLAPA
Trigger: TGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAG...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR CCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGANVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGCGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACA +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRRGRGP*RLARRT
Trigger: TGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCG...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCACGTCTGCCCGTACCTaGCCCCCGCACTCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGTSART*PPHSVA
Trigger: CGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGT...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGCTGAGGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: GQATRGSKGALHPAGPAEAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...CTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCGTCTCACCAGGCCATTaGCCCTGCAGGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPVSPGH*PCRSWG
Trigger: GCCCCAGGACCTGCAGGGCCAATGGCCTGGTGAGAC...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTGTCTCACCAGGCCATTaGCCCTGCAGGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LRCPGVADRPLGLREALSVSPGH*PCRSWG
Trigger: GCCCCAGGACCTGCAGGGCCAATGGCCTGGTGAGAC...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAATCGGCTCCCCACGGTaGCTCCTGGGGGACATGCAC +
Preference number: 4 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLIGSPR*LLGDMH
Trigger: GTGCATGTCCCCCAGGAGCCACCGTGGGGAGCCGAT...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCTGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGATGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGCCAGGTGGCCGGGAGTaGGAGGCCAGGCGACAAGGG +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGPGGRE*EARRQG
Trigger: CCCTTGTCGCCTGGCCTCCCACTCCCGGCCACCTGG...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGADLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: LSRSAGTCGCLWPGRARATSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCCCCGGTGCCCGGGGGTaGTGGAGATGGCCCACGTGC +
Preference number: 4 (lower is better)
Translates to: LLIATVAPDEGAALTVPVPGARG*WRWPTC
Trigger: GCACGTGGGCCATCTCCAGCACCCCCGGGCACCGGG...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRSSPRP*SGSGHF
Trigger: GAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGA...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGAGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGTCTCGCCCGCTTGCTTaGTCGATCGCGACCGCGACC +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPSRPLA*SIATAT
Trigger: GGTCGCGGTCGCGATCGAGCAAGCAAGCGGGCGAGA...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520970.5
CDS-3UTR CCA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: RDVAARRLRDLPLHLPQACPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR CCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GVLLTFPLATRQGPLREESCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TCAGGAAGTTATACTCCTGCCCTGAGGGTCCGGGGAGCAGCCAAGGGGAGCCTGTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SGSYTPALRVRGAAKGSLSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...CAGGCTCCCCTTGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAACTTCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAESCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: GRREHQFCPARGRWAGMATAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...TGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGAACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGCCTGGCAGGCCTCACTaGGGGGTCCGGTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: QKRPRTGALASRPSNTSRPGRPH*GVRFLF
Trigger: GAAAAGAAACCGGACCCCCCAGTGAGGCCTGCCAGG...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCGGTGCCCGGGGGTGCTaGAGATGGCCCACGTGCACT +
Preference number: 4 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAGARGC*RWPTCT
Trigger: AGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACC...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACCGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACA +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNRGRGP*RLARRT
Trigger: TGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCG...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQTCGCL*PGRARA
Trigger: AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGT...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCGCACTCTGTGGCGTaGGAGGCCTGGAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRPHSVA*EAWKPF
Trigger: AAAGGGCTTCCAGGCCTCCCACGCCACAGAGTGCGG...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCGGCCCCCGCACTCTGTaGCGTGGGAGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGGAGDGPRALLLAGILVGPRTL*RGRPGS
Trigger: GCTTCCAGGCCTCCCACGCCACAGAGTGCGGGGGCC...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTGGCCCCCGCACTCTGTaGCGTGGGAGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTGPRTL*RGRPGS
Trigger: GCTTCCAGGCCTCCCACGCCACAGAGTGCGGGGGCC...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGCCCCTGCTCAGGCAGTaGTCACTTCCTGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: QKRPRTGALASRPSNTSRPLLRQ*SLPAVE
Trigger: CTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGG...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGATCGGCTCCCCACGGTaGCTCCTGGGGGACATGCAC +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVIGSPR*LLGDMH
Trigger: GTGCATGTCCCCCAGGAGCCACCGTGGGGAGCCGAT...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAAGGGAAGCGGCGCACTaGAGGCCAGGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAREAAH*RPGEGV
Trigger: GACGCCCTCCCCTGGCCTCCAGTGCGCCGCTTCCCT...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGTAGGAGCAGCACCTaGAGGGCGGGGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPRRSST*RAGPAQ
Trigger: CTGAGCTGGCCCCGCCCTCCAGGTGCTGCTCCTACG...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: WLRCPGVADRPLGLREALELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCGCGATGGGGTCCTGCTaGCATTCCCTCTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: SAGTCGCLWPGRARASCSAMGSC*HSLLPP
Trigger: TGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGC...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: RASCSHRSGRGRGPWRLALPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: QKRPRTGALASRPSNTSRVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCGTGTTGACGCAGTCCTaGTGGCAGCCGCCGTTATCC +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPVLTQS*WQPPLS
Trigger: GGATAACGGCGGCTGCCAGCAGGACTGCGTCAACAC...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCGTCAGCTTGACCCGGTaGCCGGGGGTGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGVSLTR*PGVLEM
Trigger: CATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGAC...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGRARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNRARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCCTTGGTCTTCACGTCTaGCCGTACCTGGCCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGLGLHV*PYLAPA
Trigger: TGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAG...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGSSPRP*SGSGHF
Trigger: GAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGA...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTTCTCGCCCGCTTGCTTaGTCGATCGCGACCGCGACC +
Preference number: 4 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGSRPLA*SIATAT
Trigger: GGTCGCGGTCGCGATCGAGCAAGCAAGCGGGCGAGA...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520970.5
CDS-3UTR GCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACGTCCTCTCGCCCGCTTaGTTGCTCGATCGCGACCGC +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNVLSPA*LLDRDR
Trigger: GCGGTCGCGATCGAGCAAGCAAGCGGGCGAGAGGAC...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520970.5
CDS-3UTR CCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATCACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAACACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGCCGGCCAGAGGGAGGTaGGCCGGAATGGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAEPARGR*AGMAEW
Trigger: CCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGG...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAACCGGCCAGAGGGAGGTaGGCCGGAATGGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQPARGR*AGMAEW
Trigger: CCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGG...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTGCCCCAGGAAACTaGGGTGGTGGAATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LRCPGVADRPLGLREALSCAPGN*GGGMGA
Trigger: AGCCCCCATTCCACCACCCCAGTTTCCTGGGGCACA...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGTGGGGAGAGGAGGATaGGGGTCCGAGCGGACCAGC +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNVGRGG*GSERTS
Trigger: GCTGGTCCGCTCGGACCCCCATCCTCCTCTCCCCAC...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGGTGGGGAGAGGAGGATaGGGGTCCGAGCGGACCAGC +
Preference number: 4 (lower is better)
Translates to: FPHLLWTVSPGHWPCRSWVGRGG*GSERTS
Trigger: GCTGGTCCGCTCGGACCCCCATCCTCCTCTCCCCAC...CCAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGCCAGGTGGCCGGGAGTaGGAGGCCAGGCGACAAGGG +
Preference number: 4 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGPGGRE*EARRQG
Trigger: CCCTTGTCGCCTGGCCTCCCACTCCCGGCCACCTGG...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTAACAGCTGGCAGAGCTaGCCAGGCCAGGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTNSWQS*PGQVAG
Trigger: CCCGGCCACCTGGCCTGGCCAGCTCTGCCAGCTGTT...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTCGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: SRSAGTCGCLWPGRARASRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCCTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGALDRVI*VEAQEH
Trigger: ATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAG...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGCTCCTCAGGAGGCCCTaGGCCACAGTAGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQLLRRP*ATVAPQ
Trigger: CTGGGGCGCTACTGTGGCTCAGGGCCTCCTGAGGAG...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RASCSHRSGRGRGPWRLAPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCT +
Preference number: 4 (lower is better)
Translates to: VPPPPMDSLTRPLALQVLAGTCG*LWPGRA
Trigger: AGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGC...CAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPRSAGT*GCLWPG
Trigger: TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCT...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTTTCGGTTTATTGGCTaGGGTGCCCTGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WLRCPGVADRPLGLREALFRFIG*GALVWL
Trigger: CAGCCACACCAGGGCACCGCAGCCAATAAACCGAAA...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGGGCTGAGGTTGGGATaGCCCAGGGGAAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VPPPPMDSLTRPLALQVLGLRLG*PRGSGG
Trigger: GCCTCCACTTCCCCTGGGGCATCCCAACCTCAGCCC...CAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCACAGCCTGCTGTACCTaGAAGGCCCTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPTACCT*KALRSS
Trigger: AGAGGACCTGAGGGCCTTCCAGGTACAGCAGGCTGT...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: GSGFLLPQKRPRTGALASLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGCACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGCCTGGCAGGCCTCACTaGGGGGTCCGGTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVPGRPH*GVRFLF
Trigger: GAAAAGAAACCGGACCCCCCAGTGAGGCCTGCCAGG...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGACGGGGGTGCTGGAGATaGCCCACGTGCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRRGCWR*PTCTPS
Trigger: AGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCG...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGGGGGTGCTGGAGATaGCCCACGTGCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPRGCWR*PTCTPS
Trigger: AGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCG...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDTCGCL*PGRARA
Trigger: AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGT...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGACCGCACTCTGTGGCGTaGGAGGCCTGGAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRPHSVA*EAWKPF
Trigger: AAAGGGCTTCCAGGCCTCCCACGCCACAGAGTGCGG...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCCGCACTCTGTGGCGTaGGAGGCCTGGAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRPHSVA*EAWKPF
Trigger: AAAGGGCTTCCAGGCCTCCCACGCCACAGAGTGCGG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTCCCCTGCTCAGGCAGTaGTCACTTCCTGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LSRSAGTCGCLWPGRARAPLLRQ*SLPAVE
Trigger: CTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGG...AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCACACAGGGATGGCGATaGGGTCCTGCTGACATTCCC +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPTQGWR*GPADIP
Trigger: GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCACGGTGGCTCCTaGGGGACATGCACAGACACT +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGPHGGS*GTCTDT
Trigger: AGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGGG...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGATCGGCTCCCCACGGTaGCTCCTGGGGGACATGCAC +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGIGSPR*LLGDMH
Trigger: GTGCATGTCCCCCAGGAGCCACCGTGGGGAGCCGAT...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAAACAGCTGGCAGAGCTaGCCAGGCCAGGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ETQGWRWGPADIPSCHQANSWQS*PGQVAG
Trigger: CCCGGCCACCTGGCCTGGCCAGCTCTGCCAGCTGTT...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAACGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCACGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRARQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp GGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GRREHQFCPARGRWAGMAAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...TGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGAGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGCCAGTTGGGGCTGGTaGTGGTACCACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQASWGW*WYHWWM
Trigger: CATCCACCAGTGGTACCATCACCAGCCCCAACTGGC...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTGCCAGTTGGGGCTGGTaGTGGTACCACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SRSAGTCGCLWPGRARASASWGW*WYHWWM
Trigger: CATCCACCAGTGGTACCATCACCAGCCCCAACTGGC...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGAGCGATGGGGTCCTGCTaGCATTCCCTCTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRAMGSC*HSLLPP
Trigger: TGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGC...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGCGATGGGGTCCTGCTaGCATTCCCTCTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRAMGSC*HSLLPP
Trigger: TGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGC...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTGTTATACTCCTGCCCTaGGGGTCCGGGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTVILLP*GSGEQP
Trigger: TGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAAC...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354870.5
CDS-3UTR GCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPDLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGTGGTCGCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: RPRTGALASRPSNTSRWSQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...CGACCACCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGADGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGACCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: ESTSSVRPEGGGPEWQSGPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...TCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAEVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAACAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGGAGGACGAAGCCACTaGGGCATTGGCACTCATAAC +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRGGRSH*GIGTHN
Trigger: GTTATGAGTGCCAATGCCGCAGTGGCTTCGTCCTCC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp AGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCCCGGTGCCCGGGGGTaGTGGAGATGGCCCACGTGC +
Preference number: 4 (lower is better)
Translates to: RNDDFEMSCGSSAPWPQPPGARG*WRWPTC
Trigger: GCACGTGGGCCATCTCCAGCACCCCCGGGCACCGGG...GGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp ACAATACAGCGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCCCCGGTGCCCGGGGGTaGTGGAGATGGCCCACGTGC +
Preference number: 4 (lower is better)
Translates to: TIQRVETQGWRWGPADIPPGARG*WRWPTC
Trigger: GCACGTGGGCCATCTCCAGCACCCCCGGGCACCGGG...GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATGTCAGCTTGACCCGGTaGCCGGGGGTGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDVSLTR*PGVLEM
Trigger: CATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGAC...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCT +
Preference number: 4 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQAGTCG*LWPGRA
Trigger: AGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGC...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCAAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPRSAGT*GCLWPG
Trigger: TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCT...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCGCAGTGGTCACTTCCTaGTGTGGAGTGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPAVVTS*CGVCPG
Trigger: TCCAGGACACACTCCACAGCAGGAAGTGACCACTGC...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: PGVADRPLGLREALSCFSSSPRP*SGSGHF
Trigger: GAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGA...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAAGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GVLLTFPLATRQGPLREEADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGGCTCCTGGGGGACATaGACAGACACTTGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQGSWGT*TDTCAP
Trigger: TGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCC...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGCTGGGACTCGATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTTTATTGGCTGCGGTaGCCTGGTGTGGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: GWDSMSISMKVSLTRCPGVYWLR*PGVADR
Trigger: CCGGTCAGCCACACCAGGGCACCGCAGCCAATAAAC...CCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATCGAGTCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCGTCCTCTCGCCCGCTTaGTTGCTCGATCGCGACCGC +
Preference number: 4 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPVLSPA*LLDRDR
Trigger: GCGGTCGCGATCGAGCAAGCAAGCGGGCGAGAGGAC...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000518913.5
CDS-3UTR GCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACCAGACGCTGGGTCTGTaGAGGGCTGAGGTTGGGATG +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNQTLGL*RAEVGM
Trigger: CATCCCAACCTCAGCCCTGCACAGACCCAGCGTCTG...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAACGCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ERLAGCSHERWKRGGPGLSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGCGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLIATVAPDEGAALTVPVSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PGVADRPLGLREALSCFSRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: LRCPGVADRPLGLREALSCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 4 (lower is better)
Translates to: RASCSHRSGRGRGPWRLAHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAACACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCGGCTGGACGTGCTCTTGATGTCATCAGGCTTCTCATAGCCACAGTAGCGCCCACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: AAGRALDVIRLLIATVAPTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...GGGCGCTACTGTGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACGGTGCCCGGGGGTGCTaGAGATGGCCCACGTGCACT +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHGARGC*RWPTCT
Trigger: AGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACC...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQTCGCL*PGRARA
Trigger: AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGT...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCGTGGCGTGGGAGGCCTaGAAGCCCTTTCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGVAWEA*KPFRWT
Trigger: GGTCCAGCGAAAGGGCTTCCAGGCCTCCCACGCCAC...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGGTGGCGTGGGAGGCCTaGAAGCCCTTTCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGVAWEA*KPFRWT
Trigger: GGTCCAGCGAAAGGGCTTCCAGGCCTCCCACGCCAC...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGGCCCCCGCACTCTGTaGCGTGGGAGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LCRSPVPPPPMDSLTRPLGPRTL*RGRPGS
Trigger: GCTTCCAGGCCTCCCACGCCACAGAGTGCGGGGGCC...CAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACACGTCTGCCCGTACCTaGCCCCCGCACTCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDTSART*PPHSVA
Trigger: CGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGT...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCACGTCTGCCCGTACCTaGCCCCCGCACTCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVTSART*PPHSVA
Trigger: CGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGT...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTCCCAGGAAACTGGGGTaGTGGAATGGGGGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LRCPGVADRPLGLREALSPRKLG*WNGGSK
Trigger: TTTTGAGCCCCCATTCCACCACCCCAGTTTCCTGGG...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCCCAGGAAACTGGGGTaGTGGAATGGGGGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPPRKLG*WNGGSK
Trigger: TTTTGAGCCCCCATTCCACCACCCCAGTTTCCTGGG...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGTGTGCCCCAGGAAACTaGGGTGGTGGAATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGCAPGN*GGGMGA
Trigger: AGCCCCCATTCCACCACCCCAGTTTCCTGGGGCACA...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCCCCACGGTGGCTCCTaGGGGACATGCACAGACACT +
Preference number: 4 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPPHGGS*GTCTDT
Trigger: AGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGGG...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
63% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TCAGGAAGTTATACTCCTGCCCTGAGGGTCCGGGGAGCAGCCAAGGGGAGCCTGCAGCCAAGGGGAGCCTaGGGAATGGGGAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SGSYTPALRVRGAAKGSLQPRGA*GMGRVS
Trigger: TGAGACCCTCCCCATTCCCCAGGCTCCCCTTGGCTG...CAGGCTCCCCTTGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAACTTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR TCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGACAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR TCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCAACTGCCGAACGTGTTaGCGCAGTCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPNCRTC*RSPAGS
Trigger: GCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGTT...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGDLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: WLMPESSSPTSYGQSHQAGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: LLIATVAPDEGAALTVPVGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GAACGCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: ERLAGCSHERWKRGGPGLGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...CAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR GCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCACAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRREHQFCPARGRWAGMAQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...TGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: WLRCPGVADRPLGLREALQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: TGWALVKLAGLGNVPLAERARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: CSHERWKRGGPGLAECVRRARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCT +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSAGTCG*LWPGRA
Trigger: AGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGC...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCT +
Preference number: 4 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVAGTCG*LWPGRA
Trigger: AGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGC...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGCTGGGACTCGATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GWDSMSISMKVSLTRCPGWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...CCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATCGAGTCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACTCTCGCCCGCTTGCTTaGTCGATCGCGACCGCGACC +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHSRPLA*SIATAT
Trigger: GGTCGCGGTCGCGATCGAGCAAGCAAGCGGGCGAGA...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520970.5
CDS-3UTR GCA 90 bp GAACAGGCCAAGGTCCTCCAAGAGGGAGTGAGCGGGAATAAGGGGCTCAGGGAAGGCGGTCCTGGGAGGTaGAGGAAAGGGAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: EQAKVLQEGVSGNKGLREGGPGR*RKGSSS
Trigger: CGAGCTGCTCCCTTTCCTGCACCTCCCAGGACCGCC...TTCCCTGAGCCCCTTATTCCCGCTCACTCCCTCTTGGAGGACCTTGGCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTGAAGGTGGCATCGTCTaGGGGGAGCCCCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSEGGIV*GEPLPW
Trigger: CCATGGCAGGGGCTCCCCGCAGACGATGCCACCTTC...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCCTACAGTGCCCAAATaGCCCGGAAGGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQPTVPK*PGRWQG
Trigger: CCCCTGCCACCTTCCGGGGCATTTGGGCACTGTAGG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTACAGCCTGCTGTACCTaGAAGGCCCTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGTACCT*KALRSS
Trigger: AGAGGACCTGAGGGCCTTCCAGGTACAGCAGGCTGT...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGASEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATTCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCACAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: ETQGWRWGPADIPSCHQAQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: LLIATVAPDEGAALTVPVRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGCTGAGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: GQATRGSKGALHPAGPAEPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: LSRSAGTCGCLWPGRARALSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGREQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 4 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: GRREHQFCPARGRWAGMANVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...TGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GACGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: DVKFRMIFSPGVTEMRHTHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...CGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLIATVAPDEGAALTVPVRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGTCGTGCTTGTTGTCATaGAGGACGAAGCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRSCLLS*RTKPLR
Trigger: CCGCAGTGGCTTCGTCCTCCATGACAACAAGCACGA...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSTCGCL*PGRARA
Trigger: AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGT...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCGTGGCGTGGGAGGCCTaGAAGCCCTTTCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVVAWEA*KPFRWT
Trigger: GGTCCAGCGAAAGGGCTTCCAGGCCTCCCACGCCAC...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCTCCACCTCAAAGGTCTaGAACACGAGCTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGSTSKV*NTSSTP
Trigger: CGGCGTGGAGCTCGTGTTCCAGACCTTTGAGGTGGA...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GACGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: DVKFRMIFSPGVTEMRHTAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...CGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LSRSAGTCGCLWPGRARAFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 4 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGTAGAGACACAGGGATaGCGATGGGGTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQVETQG*RWGPAD
Trigger: GTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGGTAGAGACACAGGGATaGCGATGGGGTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGVETQG*RWGPAD
Trigger: GTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCAGAGGGCCTGGTGAATGGAGGACTCAAGGGAACATGGGAAGGAAGCACCATTAGGGAAGCGGCGCACTaGAGGCCAGGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: AEGLVNGGLKGTWEGSTIREAAH*RPGEGV
Trigger: GACGCCCTCCCCTGGCCTCCAGTGCGCCGCTTCCCT...AATGGTGCTTCCTTCCCATGTTCCCTTGAGTCCTCCATTCACCAGGCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGCAGCCAAGGGGAGCCTaGGGAATGGGGAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKQPRGA*GMGRVS
Trigger: TGAGACCCTCCCCATTCCCCAGGCTCCCCTTGGCTG...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000483364.5
CDS-3UTR CCA 90 bp GAACAGGCCAAGGTCCTCCAAGAGGGAGTGAGCGGGAATAAGGGGCTCAGGGAAGGGTGTCCTCAGGGGTaGGCCTGTAGGGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: EQAKVLQEGVSGNKGLREGCPQG*ACREEW
Trigger: CCACTCCTCCCTACAGGCCCACCCCTGAGGACACCC...TTCCCTGAGCCCCTTATTCCCGCTCACTCCCTCTTGGAGGACCTTGGCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCGGGGAGCCCCTGCCATaGGGAAGGGCTGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAGEPLP*GRAEMW
Trigger: CCACATCTCAGCCCTTCCCCATGGCAGGGGCTCCCC...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp GGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGCTGAGCCGAGCGGACCAGCATaGGTCACCATTACCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GQATRGSKGALHPAGPAEPSGPA*VTITCL
Trigger: TAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGG...CTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: PGGAGDGPRALLLAGILVQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAACAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GVLLTFPLATRQGPLREEQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTCGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: CSHERWKRGGPGLAECVRRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp GGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: GSGLCRSPVPPPPMDSLTSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...GGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGAACTGCCGAACGTGTTaGCGCAGTCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMNCRTC*RSPAGS
Trigger: GCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGTT...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRLDRVI*VEAQEH
Trigger: ATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAG...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCTTCCTCGGCCACAATaGCCCACTCACAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPLPRPQ*PTHSPH
Trigger: GTGTGGACTGTGAGTGGGTCATTGTGGCCGAGGAAG...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCACAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVAQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CSHERWKRGGPGLAECVRQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518656.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: CSHERWKRGGPGLAECVRGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518656.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAACAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GVLLTFPLATRQGPLREEQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTTAATGGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: VNGPVRDELEPEAAGRALTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...AAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCCATTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: WLRCPGVADRPLGLREALPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: RDVAARRLRDLPLHLPQAPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR GCA 90 bp GGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 4 (lower is better)
Translates to: GRREHQFCPARGRWAGMAARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...TGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TGWALVKLAGLGNVPLAEVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAEVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTGTTGACGCAGTCCTaGTGGCAGCCGCCGTTATCC +
Preference number: 4 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQVLTQS*WQPPLS
Trigger: GGATAACGGCGGCTGCCAGCAGGACTGCGTCAACAC...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATGTGTTGACGCAGTCCTaGTGGCAGCCGCCGTTATCC +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDVLTQS*WQPPLS
Trigger: GGATAACGGCGGCTGCCAGCAGGACTGCGTCAACAC...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGTGTTGACGCAGTCCTaGTGGCAGCCGCCGTTATCC +
Preference number: 4 (lower is better)
Translates to: ETQGWRWGPADIPSCHQAVLTQS*WQPPLS
Trigger: GGATAACGGCGGCTGCCAGCAGGACTGCGTCAACAC...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGGAGGACGAAGCCACTaGGGCATTGGCACTCATAAC +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQGGRSH*GIGTHN
Trigger: GTTATGAGTGCCAATGCCGCAGTGGCTTCGTCCTCC...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGGCTTCTTTGCAGTCGTaGTTGTTGTCATGGAGGACG +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRASLQS*LLSWRT
Trigger: CGTCCTCCATGACAACAAGCACGACTGCAAAGAAGC...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GPVRDELEPEAAGRALDVRSAGT*GCLWPG
Trigger: TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCT...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGCAGTGGTCACTTCCTaGTGTGGAGTGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHAVVTS*CGVCPG
Trigger: TCCAGGACACACTCCACAGCAGGAAGTGACCACTGC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSSSPRP*SGSGHF
Trigger: GAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGA...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGARGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 4 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCATGCACAGACACTTGTaGCCCAGGAAACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAMHRHL*PRKLGW
Trigger: CCACCCCAGTTTCCTGGGGCACAAGTGTCTGTGCAT...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGTTTATTGGCTGCGGTaGCCTGGTGTGGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: ETQGWRWGPADIPSCHQAVYWLR*PGVADR
Trigger: CCGGTCAGCCACACCAGGGCACCGCAGCCAATAAAC...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGCACTCGTCCTTGTCTaGAGGGGAGCAAATAAGGGC +
Preference number: 4 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRALVLV*RGANKG
Trigger: GCCCTTATTTGCTCCCCTGCAGACAAGGACGAGTGC...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp TTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LCRSPVPPPPMDSLTRPLSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACATCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: KGTWEGSTISRATAEKEQGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...CTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGATCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GAACAGGCCAAGGTCCTCCAAGAGGGAGTGAGCGGGAATAAGGGGCTCAGGGAACAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: EQAKVLQEGVSGNKGLREQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...TTCCCTGAGCCCCTTATTCCCGCTCACTCCCTCTTGGAGGACCTTGGCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: PPDADFAGPVIVWVVGRLQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...CAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCACGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVARTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp GAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGATGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: ESTSSVRPEGGGPEWQSGCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...TCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCTACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR CCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR CCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGCCTGGCAGGCCTCACTaGGGGGTCCGGTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGPGRPH*GVRFLF
Trigger: GAAAAGAAACCGGACCCCCCAGTGAGGCCTGCCAGG...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCACAGACACCATCAAAATaGGAGGGGGTAGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAQTPSK*EGVGHG
Trigger: CCCGTGCCCTACCCCCTCCCATTTTGATGGTGTCTG...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGTTGACGCAGTCCTGCTaGCAGCCGCCGTTATCCTTG +
Preference number: 4 (lower is better)
Translates to: FPHLLWTVSPGHWPCRSWLTQSC*QPPLSL
Trigger: CAAGGATAACGGCGGCTGCCAGCAGGACTGCGTCAA...CCAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTTGACGCAGTCCTGCTaGCAGCCGCCGTTATCCTTG +
Preference number: 4 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPLTQSC*QPPLSL
Trigger: CAAGGATAACGGCGGCTGCCAGCAGGACTGCGTCAA...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGCGGGGGTGCTGGAGATaGCCCACGTGCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PPDADFAGPVIVWVVGRLRGCWR*PTCTPS
Trigger: AGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCG...CAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGGTGCCCGGGGGTGCTaGAGATGGCCCACGTGCACT +
Preference number: 4 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRGARGC*RWPTCT
Trigger: AGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACC...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGCGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACA +
Preference number: 4 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLRGRGP*RLARRT
Trigger: TGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCG...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAATCCACCTCAAAGGTCTaGAACACGAGCTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQSTSKV*NTSSTP
Trigger: CGGCGTGGAGCTCGTGTTCCAGACCTTTGAGGTGGA...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCCCCCTGCTCAGGCAGTaGTCACTTCCTGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WLMPESSSPTSYGQSHQAPLLRQ*SLPAVE
Trigger: CTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGG...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTaGCCCTGCAGGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTVSPGH*PCRSWG
Trigger: GCCCCAGGACCTGCAGGGCCAATGGCCTGGTGAGAC...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACCCCACGGTGGCTCCTaGGGGACATGCACAGACACT +
Preference number: 4 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGPHGGS*GTCTDT
Trigger: AGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGGG...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTGGGAGGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAACACTTTCGGTTTATTaGCTGCGGTGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VGGQATRGSKGALHPAGPTLSVY*LRCPGV
Trigger: CACACCAGGGCACCGCAGCCAATAAACCGAAAGTGT...TGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCCTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520970.5
CDS-3UTR CCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTCAGCCAAGGGGAGCCTaGGGAATGGGGAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLQPRGA*GMGRVS
Trigger: TGAGACCCTCCCCATTCCCCAGGCTCCCCTTGGCTG...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000483364.5
CDS-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGAGGCAGGGTGGCCTaGGTGTCCTCAGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGGGRVA*VSSGVG
Trigger: GCCCACCCCTGAGGACACCCAGGCCACCCTGCCTCC...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACCTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHLELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp CGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCACGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: REVQDDLLPGCDRDAPHARQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...TGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp AAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGCGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: KWLMPESSSPTSYGQSHQRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...CTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: TGWALVKLAGLGNVPLAEAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCGGCTGGACGTGCTCTTGATGTCATCAGGCTTCTCATAGCCACAGTAGCGCCCGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: AAGRALDVIRLLIATVAPAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...GGGCGCTACTGTGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAACTGCCGAACGTGTTaGCGCAGTCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDNCRTC*RSPAGS
Trigger: GCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGTT...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGAACTGCCGAACGTGTTaGCGCAGTCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVNCRTC*RSPAGS
Trigger: GCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGTT...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACGCCAGTTGGGGCTGGTaGTGGTACCACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDASWGW*WYHWWM
Trigger: CATCCACCAGTGGTACCATCACCAGCCCCAACTGGC...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR TCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCTCCTCAGGAGGCCCTaGGCCACAGTAGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSLLRRP*ATVAPQ
Trigger: CTGGGGCGCTACTGTGGCTCAGGGCCTCCTGAGGAG...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TCAGGAAGTTATACTCCTGCCCTGAGGGTCCGGGGAGCAGCCAAGGGGAGCCTGGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SGSYTPALRVRGAAKGSLDLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...CAGGCTCCCCTTGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAACTTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR GCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRADLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCAGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVAGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KWLMPESSSPTSYGQSHQQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...CTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp AGGCCAGTTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: RPVGAGDGTTGGCHLVVTGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...TGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAACTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCATTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRALPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PGVADRPLGLREALSCFSLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: LVMVPLVDVTLWSQPASLTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCTCAAAGAAGTCAAACTaGAGGGAGATGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPSKKSN*REMRYW
Trigger: CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGA...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCATGGAGATGGCCCACGTaGACTCCTTCTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAWRWPT*TPSCWD
Trigger: ATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCA...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCTGGAGATGGCCCACGTaGACTCCTTCTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PGGAGDGPRALLLAGILVWRWPT*TPSCWD
Trigger: ATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCA...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGTCAGCTTGACCCGGTaGCCGGGGGTGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRVSLTR*PGVLEM
Trigger: CATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGAC...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLRSAGT*GCLWPG
Trigger: TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCT...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVSSPRP*SGSGHF
Trigger: GAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGA...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGATGCACAGACACTTGTaGCCCAGGAAACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAEMHRHL*PRKLGW
Trigger: CCACCCCAGTTTCCTGGGGCACAAGTGTCTGTGCAT...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGAGGCTCCTGGGGGACATaGACAGACACTTGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGGSWGT*TDTCAP
Trigger: TGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCC...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGTTTATTGGCTGCGGTaGCCTGGTGTGGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQVYWLR*PGVADR
Trigger: CCGGTCAGCCACACCAGGGCACCGCAGCCAATAAAC...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCATTAGCCTCGGAGTaGTGTCCCCAGCATCTCGGG +
Preference number: 4 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGPLASE*CPQHLG
Trigger: CCCGAGATGCTGGGGACAGCACTCCGAGGCTAATGG...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSCPLVL*QLGVEV