RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BMP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000168487

Ensembl transcript IDs: ENST00000306349.13, ENST00000306385.10, ENST00000354870.5, ENST00000397814.7, ENST00000471755.5, ENST00000483364.5, ENST00000518656.5, ENST00000518913.5, ENST00000520626.6, ENST00000520970.5, ENST00000520982.5, ENST00000521385.5, ENST00000521521.5, ENST00000522332.1, ENST00000523457.5, ENST00000523749.5, ENST00000523849.1

Found 1734 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCC +
Preference number: 1 (lower is better)
Translates to: AGTCGCLWPGRARAS*SHRSGRGRGPWRLA
Trigger: GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR CCA 90 bp TGCAGGGCTGAGGTTGGGATGCCCCAGGGGAAGTGGAGGCCTGGCTaGACTTTCTCCCACCGGGACAGAGCAACAGCTGGCAGAGCTGGC +
Preference number: 1 (lower is better)
Translates to: CRAEVGMPQGKWRPG*TFSHRDRATAGRAG
Trigger: GCCAGCTCTGCCAGCTGTTGCTCTGTCCCGGTGGGAGAAAGTCCAGCCAGGCCTCCACTTCCCCTGGGGCATCCCAACCTCAGCCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR TCA 90 bp TGTGGCGTGGGAGGCCTGGAAGCCCTTTCGCTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGG +
Preference number: 1 (lower is better)
Translates to: CGVGGLEALSLDRVI*VEAQEHAAACGQDG
Trigger: CCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAGCGAAAGGGCTTCCAGGCCTCCCACGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR GCA 90 bp ATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAAC +
Preference number: 1 (lower is better)
Translates to: IQSRRPRAAGSSPRP*SGSGHFLLWSVSWN
Trigger: GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGA +
Preference number: 1 (lower is better)
Translates to: GPSYLSRSAGTCGCL*PGRARASCSHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR TCA 90 bp TTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTaGGAGAAGCCCTGTCTTGTTTCTCCATCCCCTCCCCATCGGCTC +
Preference number: 1 (lower is better)
Translates to: FIGCGALVWLTGHWA*EKPCLVSPSPPHRL
Trigger: GAGCCGATGGGGAGGGGATGGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR GCA 90 bp AGCCCTTTCGCTGGACCGAGTTATCTGAGTAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCCAC +
Preference number: 1 (lower is better)
Translates to: SPFAGPSYLSRSAGT*GCLWPGRARASCSH
Trigger: GTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAGCGAAAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR GCA 90 bp TTCGCTGGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGC +
Preference number: 1 (lower is better)
Translates to: FAGPSYLSRSAGTCG*LWPGRARASCSHRS
Trigger: GCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAGCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR TCA 90 bp CTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAATGGGAGGTTTCACCCCGTTCACCT +
Preference number: 1 (lower is better)
Translates to: LGTCKACGLGQCPPC*AVSFGQWEVSPRSP
Trigger: AGGTGAACGGGGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR TCA 90 bp GGCTGTAACACTTTCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCAT +
Preference number: 1 (lower is better)
Translates to: GCNTFGLLAAVPWCG*PATGPERSPVLFLH
Trigger: ATGGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGAAAGTGTTACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520970.5
3UTR GCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAA +
Preference number: 1 (lower is better)
Translates to: VETQGWRWGPADIPS*HQAGPPKRGMMTSK
Trigger: TTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR CCA 90 bp TCCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGC +
Preference number: 1 (lower is better)
Translates to: SARCRLCWAGNRLGS*AIECGHSPFSHHPR
Trigger: GCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 90 bp TCCTGTCCAGCAGAGGGCCTGGTGAATGGAGGACTCAAGGGAACATaGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAG +
Preference number: 1 (lower is better)
Translates to: SCPAEGLVNGGLKGT*EGSTISRATAEKEQ
Trigger: CTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTTGAGTCCTCCATTCACCAGGCCCTCTGCTGGACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR TCA 90 bp TATCCAGGAAGATGCCCCTGGAGAATGTGTTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCT +
Preference number: 1 (lower is better)
Translates to: YPGRCPWRMCSERNA*CCRSHRSPPGTPPP
Trigger: AGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATCATGCATTACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR TCA 90 bp AATGGGGAGGGTCTCAGGAAGAGTCCTGTCCAGCAGAGGGCCTGGTaGATGGAGGACTCAAGGGAACATGGGAAGGAAGCACCATTTCTA +
Preference number: 1 (lower is better)
Translates to: NGEGLRKSPVQQRAW*MEDSREHGKEAPFL
Trigger: TAGAAATGGTGCTTCCTTCCCATGTTCCCTTGAGTCCTCCATTCACCAGGCCCTCTGCTGGACAGGACTCTTCCTGAGACCCTCCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR GCA 90 bp GAGGAGGATGGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTaGTTACTGGACAGATGGACAAGTGGAAAAATAGACACATGGACA +
Preference number: 1 (lower is better)
Translates to: EEDGGPSGPAWVTIT*LLDRWTSGKIDTWT
Trigger: TGTCCATGTGTCTATTTTTCCACTTGTCCATCTGTCCAGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCCATCCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR CCA 90 bp GTGTCCTTTGGCCAATGGGAGGTTTCACCCCGTTCACCTCATACTTaGGGACAATGGTATCCAGGAAGATGCCCCTGGAGAATGTGTTCC +
Preference number: 1 (lower is better)
Translates to: VSFGQWEVSPRSPHT*GQWYPGRCPWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCATTGTCCCCAAGTATGAGGTGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 90 bp CACCTGGATCCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATC +
Preference number: 1 (lower is better)
Translates to: HLDPPDADFAGPVIV*VVGRLNVAIVLFHI
Trigger: GATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CAA 90 bp CGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTaGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGC +
Preference number: 2 (lower is better)
Translates to: RRNMRLPVARTGSGF*LPQKRPRTGALASR
Trigger: GCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR GCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTACCCGGTGCCCGGGGGTaGTGGAGATGGCCCACGTGC +
Preference number: 2 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLPGARG*WRWPTC
Trigger: GCACGTGGGCCATCTCCAGCACCCCCGGGCACCGGG...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTTGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR TCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: SAGTCGCLWPGRARASCSVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: RASCSHRSGRGRGPWRLARGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR GCA 90 bp CGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGTGGTCGGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 2 (lower is better)
Translates to: RPRTGALASRPSNTSRWSGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...CGACCACCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCGGTCCAAAGGGGCACTaGATCCAGCAGGACCAGCTG +
Preference number: 2 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGAGPKGH*IQQDQL
Trigger: CAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACC...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGTGGTCGCCCCACGGTGGCTCCTaGGGGACATGCACAGACACT +
Preference number: 2 (lower is better)
Translates to: RPRTGALASRPSNTSRWSPHGGS*GTCTDT
Trigger: AGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGGG...CGACCACCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACA +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRRGRGP*RLARRT
Trigger: TGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCG...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 2 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCCGTAGGAGCAGCACCTaGAGGGCGGGGCCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: SAGTCGCLWPGRARASCSRRSST*RAGPAQ
Trigger: CTGAGCTGGCCCCGCCCTCCAGGTGCTGCTCCTACG...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 2 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCGCTGGCCAGGCCAGGTaGCCGGGAGTGGGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: PGVADRPLGLREALSCFSAGQAR*PGVGGQ
Trigger: CTGGCCTCCCACTCCCGGCCACCTGGCCTGGCCAGC...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR TCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 2 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGTGGTCGTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: RPRTGALASRPSNTSRWSWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...CGACCACCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTGTTTATTGGCTGCGGTaGCCTGGTGTGGCTGACCGG +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASVYWLR*PGVADR
Trigger: CCGGTCAGCCACACCAGGGCACCGCAGCCAATAAAC...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTTCGGTTTATTGGCTaGGGTGCCCTGGTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGAFRFIG*GALVWL
Trigger: CAGCCACACCAGGGCACCGCAGCCAATAAACCGAAA...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 2 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTACTTGGTCTTCACGTCTaGCCGTACCTGGCCCCCGCA +
Preference number: 2 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLLGLHV*PYLAPA
Trigger: TGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAG...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 2 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGAFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCGGCCAGAGGGAGGTaGGCCGGAATGGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGPARGR*AGMAEW
Trigger: CCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGG...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGCCGCACTCTGTGGCGTaGGAGGCCTGGAAGCCCTTT +
Preference number: 2 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRPHSVA*EAWKPF
Trigger: AAAGGGCTTCCAGGCCTCCCACGCCACAGAGTGCGG...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTACGTCTGCCCGTACCTaGCCCCCGCACTCTGTGGCG +
Preference number: 2 (lower is better)
Translates to: SRSAGTCGCLWPGRARASTSART*PPHSVA
Trigger: CGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGT...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR TCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGGCCAGTTGGGGCTGGTaGTGGTACCACTGGTGGATG +
Preference number: 2 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRASWGW*WYHWWM
Trigger: CATCCACCAGTGGTACCATCACCAGCCCCAACTGGC...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 2 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
66% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACCCCGGTGCCCGGGGGTaGTGGAGATGGCCCACGTGC +
Preference number: 2 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDPGARG*WRWPTC
Trigger: GCACGTGGGCCATCTCCAGCACCCCCGGGCACCGGG...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGTCAGCTTGACCCGGTaGCCGGGGGTGCTGGAGATG +
Preference number: 2 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHVSLTR*PGVLEM
Trigger: CATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGAC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 2 (lower is better)
Translates to: RASCSHRSGRGRGPWRLADLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 2 (lower is better)
Translates to: LRCPGVADRPLGLREALSGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp GGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGCTGAGCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: GQATRGSKGALHPAGPAEQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...CTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGTCTCACCAGGCCATTaGCCCTGCAGGTCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRVSPGH*PCRSWG
Trigger: GCCCCAGGACCTGCAGGGCCAATGGCCTGGTGAGAC...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 2 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GAGAACGCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 2 (lower is better)
Translates to: ENAWLDVLTNDGNVAVPVSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...GACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGCGTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR-3UTR TCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 2 (lower is better)
Translates to: SAGTCGCLWPGRARASCSQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 2 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGGCTCCTGGGGGACATaGACAGACACTTGTGCCCCA +
Preference number: 2 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGGSWGT*TDTCAP
Trigger: TGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCC...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 2 (lower is better)
Translates to: RREHQFCPARGRWAGMAEVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp CTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTGGTCCAAAGGGGCACTaGATCCAGCAGGACCAGCTG +
Preference number: 2 (lower is better)
Translates to: LSRSAGTCGCLWPGRARAGPKGH*IQQDQL
Trigger: CAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACC...AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGGGGTTTGTGGGGAAGTaGCTTATGCCGGAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: WLRCPGVADRPLGLREALGFVGK*LMPESS
Trigger: ACTGGACTCCGGCATAAGCCACTTCCCCACAAACCC...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTGGGTTTGTGGGGAAGTaGCTTATGCCGGAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASGFVGK*LMPESS
Trigger: ACTGGACTCCGGCATAAGCCACTTCCCCACAAACCC...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGCCCAGGAAACTGGGGTaGTGGAATGGGGGCTCAAAA +
Preference number: 2 (lower is better)
Translates to: WLRCPGVADRPLGLREALPRKLG*WNGGSK
Trigger: TTTTGAGCCCCCATTCCACCACCCCAGTTTCCTGGG...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACTGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: RVETQGWRWGPADIPSCHCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp AGAGGAGGATGGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTGCTTACTTGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 2 (lower is better)
Translates to: RGGWGSERTSMGHHYLLTCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...AGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCCATCCTCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATCCGGCCAGAGGGAGGTaGGCCGGAATGGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDPARGR*AGMAEW
Trigger: CCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGG...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 2 (lower is better)
Translates to: RDVAARRLRDLPLHLPQAPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCCGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACA +
Preference number: 2 (lower is better)
Translates to: WLMPESSSPTSYGQSHQARGRGP*RLARRT
Trigger: TGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCG...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 2 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGATCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 2 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 2 (lower is better)
Translates to: SAGTCGCLWPGRARASCSLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 2 (lower is better)
Translates to: LLIATVAPDEGAALTVPVTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 2 (lower is better)
Translates to: GPVRDELEPEAAGRALDVTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: LGLVMVPLVDVTLWSQPAAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...AGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 2 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCGGCCAGAGGGAGGTaGGCCGGAATGGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVPARGR*AGMAEW
Trigger: CCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGG...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 2 (lower is better)
Translates to: QKRPRTGALASRPSNTSRVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 2 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 2 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TCAGGAAGTTATACTCCTGCCCTGAGGGTCCGGGGAGCAGCCAAGGGGAGCCTGCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 2 (lower is better)
Translates to: SGSYTPALRVRGAAKGSLQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...CAGGCTCCCCTTGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAACTTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR-3UTR CCA 90 bp TCAGGAAGTTATACTCCTGCCCTGAGGGTCCGGGGAGCAGCCAAGGGGAGCCTGCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 2 (lower is better)
Translates to: SGSYTPALRVRGAAKGSLRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...CAGGCTCCCCTTGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAACTTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR-3UTR CCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 2 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR TCA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAACACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 2 (lower is better)
Translates to: GVLLTFPLATRQGPLREEHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR TCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 2 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATCGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 2 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 2 (lower is better)
Translates to: RREHQFCPARGRWAGMAEAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR TCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGAACTGCCGAACGTGTTaGCGCAGTCCTGCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: RREHQFCPARGRWAGMAENCRTC*RSPAGS
Trigger: GCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGTT...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR TCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 2 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp AAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 2 (lower is better)
Translates to: KWLMPESSSPTSYGQSHQGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...CTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 2 (lower is better)
Translates to: REVQDDLLPGCDRDAPHAGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...TGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: WLMPESSSPTSYGQSHQAVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 2 (lower is better)
Translates to: RDVAARRLRDLPLHLPQAWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 2 (lower is better)
Translates to: QKRPRTGALASRPSNTSRFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCTGGAGATGGCCCACGTaGACTCCTTCTTGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGWRWPT*TPSCWD
Trigger: ATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCA...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 2 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVRARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR GCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCGAAGGTGGCATCGTCTaGGGGGAGCCCCTGCCATGG +
Preference number: 2 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGEGGIV*GEPLPW
Trigger: CCATGGCAGGGGCTCCCCGCAGACGATGCCACCTTC...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR GCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACGGGCTGAGGTTGGGATaGCCCAGGGGAAGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDGLRLG*PRGSGG
Trigger: GCCTCCACTTCCCCTGGGGCATCCCAACCTCAGCCC...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAACAGACACCATCAAAATaGGAGGGGGTAGGGCACGGG +
Preference number: 2 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKQTPSK*EGVGHG
Trigger: CCCGTGCCCTACCCCCTCCCATTTTGATGGTGTCTG...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCCAGACACCATCAAAATaGGAGGGGGTAGGGCACGGG +
Preference number: 2 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAQTPSK*EGVGHG
Trigger: CCCGTGCCCTACCCCCTCCCATTTTGATGGTGTCTG...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCTGGAACTTGGTGCTaGTGTATCGCAGGTGGAAAC +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRPGTWC*CIAGGN
Trigger: GTTTCCACCTGCGATACACCAGCACCAAGTTCCAGG...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCAGGGGAGCCCCTGCCATaGGGAAGGGCTGAGATGTGG +
Preference number: 2 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVAGEPLP*GRAEMW
Trigger: CCACATCTCAGCCCTTCCCCATGGCAGGGGCTCCCC...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCAAGTGGAGGCCTGGCTaGACTTTCTCCCACCGGGAC +
Preference number: 2 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPKWRPG*TFSHRD
Trigger: GTCCCGGTGGGAGAAAGTCCAGCCAGGCCTCCACTT...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR TCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATGCGATGGGGTCCTGCTaGCATTCCCTCTTGCCACCA +
Preference number: 2 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDAMGSC*HSLLPP
Trigger: TGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGC...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR TCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTGCCATGGGGAAGGGCTaGGATGTGGGCTGGGATGCA +
Preference number: 2 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSAMGKG*DVGWDA
Trigger: TGCATCCCAGCCCACATCTCAGCCCTTCCCCATGGC...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR TCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGCGATGTCCATCTCCATaGAGGTCTTCTTTGCAGTCG +
Preference number: 2 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRRCPSP*RSSLQS
Trigger: CGACTGCAAAGAAGACCTTCATGGAGATGGACATCG...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520970.5
3UTR-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACATGCACAGACACTTGTaGCCCAGGAAACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNMHRHL*PRKLGW
Trigger: CCACCCCAGTTTCCTGGGGCACAAGTGTCTGTGCAT...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCAGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTGGAGGACGAAGCCACTaGGGCATTGGCACTCATAAC +
Preference number: 2 (lower is better)
Translates to: SRSAGTCGCLWPGRARASGGRSH*GIGTHN
Trigger: GTTATGAGTGCCAATGCCGCAGTGGCTTCGTCCTCC...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGGAGGACGAAGCCACTaGGGCATTGGCACTCATAAC +
Preference number: 2 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHGGRSH*GIGTHN
Trigger: GTTATGAGTGCCAATGCCGCAGTGGCTTCGTCCTCC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp AGAGGAGGATGGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTGCTTACTTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTC +
Preference number: 2 (lower is better)
Translates to: RGGWGSERTSMGHHYLLTSSPRP*SGSGHF
Trigger: GAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGA...AGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCCATCCTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 2 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 2 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: GSGFLLPQKRPRTGALASNRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: SAGTCGCLWPGRARASCSSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 2 (lower is better)
Translates to: RVETQGWRWGPADIPSCHTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR CAA 90 bp TTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTGGCCAATGGG +
Preference number: 2 (lower is better)
Translates to: LQGLSTGWALVKLAG*GNVPLAEPCPLANG
Trigger: CCCATTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 2 (lower is better)
Translates to: LLIATVAPDEGAALTVPVQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 2 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACAGAAGAAGTGGGCCTTaGAGCCCTTTTTGGACACGG +
Preference number: 2 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHRRSGP*SPFWTR
Trigger: CCGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCT...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAATGCACAGACACTTGTaGCCCAGGAAACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAMHRHL*PRKLGW
Trigger: CCACCCCAGTTTCCTGGGGCACAAGTGTCTGTGCAT...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GCGGCTGGACGTGCTCTTGATGTCATCAGGCTTCTCATAGCCACAGTAGCGCCCCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 2 (lower is better)
Translates to: AAGRALDVIRLLIATVAPPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...GGGCGCTACTGTGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 2 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAACCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGCTTCTTTGCAGTCGTaGTTGTTGTCATGGAGGACG +
Preference number: 2 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGASLQS*LLSWRT
Trigger: CGTCCTCCATGACAACAAGCACGACTGCAAAGAAGC...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp TACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGCTCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 2 (lower is better)
Translates to: YHWWMSPCGHSRLLCSRARARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...AGCACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TGGCCAATGGGAGGTTTCACCCCGTTCACCTCATACTTGGGGACAATGGTATCCGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: WPMGGFTPFTSYLGTMVSAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...GGATACCATTGTCCCCAAGTATGAGGTGAACGGGGTGAAACCTCCCATTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGAGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 2 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCGTAGAGACACAGGGATaGCGATGGGGTCCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGVETQG*RWGPAD
Trigger: GTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCACCCAGGAAACTGGGGTaGTGGAATGGGGGCTCAAAA +
Preference number: 2 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAPRKLG*WNGGSK
Trigger: TTTTGAGCCCCCATTCCACCACCCCAGTTTCCTGGG...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: SRSAGTCGCLWPGRARASRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 2 (lower is better)
Translates to: GPVRDELEPEAAGRALDVNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCAAAGATGGGGAGCCTGTaGACTCCCCAAGGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVAKMGSL*TPQGSG
Trigger: CCCTGAGCCTTGGGGAGTCCACAGGCTCCCCATCTT...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 2 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCACGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 2 (lower is better)
Translates to: REVQDDLLPGCDRDAPHARTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...TGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAATCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 2 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCTTTCGGTTTATTGGCTaGGGTGCCCTGGTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: WLMPESSSPTSYGQSHQAFRFIG*GALVWL
Trigger: CAGCCACACCAGGGCACCGCAGCCAATAAACCGAAA...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: LLIATVAPDEGAALTVPVGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: GPVRDELEPEAAGRALDVGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAACAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 2 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 2 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCGGTCCTGGGAGGTaGAGGAAAGGGAGCAGCTCG +
Preference number: 2 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGGGPGR*RKGSSS
Trigger: CGAGCTGCTCCCTTTCCTGCACCTCCCAGGACCGCC...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 2 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATGTAGAGACACAGGGATaGCGATGGGGTCCTGCTGAC +
Preference number: 2 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHVETQG*RWGPAD
Trigger: GTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 2 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 2 (lower is better)
Translates to: PGGAGDGPRALLLAGILVVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 2 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGCTCGGGGGTGCTGGAGATaGCCCACGTGCACTCCTTCT +
Preference number: 2 (lower is better)
Translates to: YHWWMSPCGHSRLLCSRARGCWR*PTCTPS
Trigger: AGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCG...AGCACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGGAGGCAGGGTGGCCTaGGTGTCCTCAGGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWGGRVA*VSSGVG
Trigger: GCCCACCCCTGAGGACACCCAGGCCACCCTGCCTCC...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp TGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGTGGGGAGAGGAGGATaGGGGTCCGAGCGGACCAGC +
Preference number: 2 (lower is better)
Translates to: WVVGRLNVAIVLFHITPAVGRGG*GSERTS
Trigger: GCTGGTCCGCTCGGACCCCCATCCTCCTCTCCCCAC...TGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp CATCTCCATGAAGGTCTTCTTTGCAGTCGTGCTTGTTGTCATGGAGGACGAAGCCCAGGTGGCCGGGAGTaGGAGGCCAGGCGACAAGGG +
Preference number: 2 (lower is better)
Translates to: HLHEGLLCSRACCHGGRSPGGRE*EARRQG
Trigger: CCCTTGTCGCCTGGCCTCCCACTCCCGGCCACCTGG...GCTTCGTCCTCCATGACAACAAGCACGACTGCAAAGAAGACCTTCATGGAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520970.5
3UTR-3UTR CCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATCGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 2 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR TCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCATCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 2 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRASERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 2 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCACTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 2 (lower is better)
Translates to: ETQGWRWGPADIPSCHQALELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR GCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 2 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGATGCACAGACACTTGTaGCCCAGGAAACTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PPDADFAGPVIVWVVGRLMHRHL*PRKLGW
Trigger: CCACCCCAGTTTCCTGGGGCACAAGTGTCTGTGCAT...CAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 2 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp AGGCCAGTTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 2 (lower is better)
Translates to: RPVGAGDGTTGGCHLVVTVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...TGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAACTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTCACAGCCGGCTTCTTTaGAGTCGTGCTTGTTGTCAT +
Preference number: 2 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTHSRLL*SRACCH
Trigger: ATGACAACAAGCACGACTGCAAAGAAGCCGGCTGTG...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGAAGTTATACTCCTGCCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 2 (lower is better)
Translates to: GSYTPALAGCSHERWKRGGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...GCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAACTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AAAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 2 (lower is better)
Translates to: KGAGRRGPSFTSQQEMSQAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...CTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 2 (lower is better)
Translates to: VETQGWRWGPADIPSCHQFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTACACAGGGATGGCGATaGGGTCCTGCTGACATTCCC +
Preference number: 2 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLTQGWR*GPADIP
Trigger: GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCCCAGGAAACTGGGGTaGTGGAATGGGGGCTCAAAA +
Preference number: 2 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAPRKLG*WNGGSK
Trigger: TTTTGAGCCCCCATTCCACCACCCCAGTTTCCTGGG...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 2 (lower is better)
Translates to: TGWALVKLAGLGNVPLAELSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 2 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 2 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 2 (lower is better)
Translates to: GPVRDELEPEAAGRALDVGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGATGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 2 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp TGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGCCAGTTGGGGCTGGTaGTGGTACCACTGGTGGATG +
Preference number: 2 (lower is better)
Translates to: CHQAGPPKRGMMTSKCLVASWGW*WYHWWM
Trigger: CATCCACCAGTGGTACCATCACCAGCCCCAACTGGC...CACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 2 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 2 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 2 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 2 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGGTCACCATTACCTaGTTACTGGACAGATGGACA +
Preference number: 2 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTWVTIT*LLDRWT
Trigger: TGTCCATCTGTCCAGTAAGCAGGTAATGGTGACCCA...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCATCTTCTTTGCAGTCGTaGTTGTTGTCATGGAGGACG +
Preference number: 2 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRASSLQS*LLSWRT
Trigger: CGTCCTCCATGACAACAAGCACGACTGCAAAGAAGA...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520970.5
3UTR-3UTR CCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACCTTCGAAATGTCTTGTaGAAGCTCTGCTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDLRNVL*KLCSLA
Trigger: GGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAG...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 2 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GACGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 2 (lower is better)
Translates to: DVKFRMIFSPGVTEMRHTPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCCATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 2 (lower is better)
Translates to: GPVRDELEPEAAGRALDVHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 2 (lower is better)
Translates to: REVQDDLLPGCDRDAPHAGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...TGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGAGGGAGTAAAGGTCCTTaGTCTTCACGTCTGCCCGTA +
Preference number: 2 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGGSKGP*SSRLPV
Trigger: TACGGGCAGACGTGAAGACCAAGGACCTTTACTCCC...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACCCTGGAACTTGGTGCTaGTGTATCGCAGGTGGAAAC +
Preference number: 2 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDPGTWC*CIAGGN
Trigger: GTTTCCACCTGCGATACACCAGCACCAAGTTCCAGG...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTGTGTCTGGTCCCTCTaGGGCGGACGGGAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRCVWSL*GGREEA
Trigger: TGCCTCCTCCCGTCCGCCCCAGAGGGACCAGACACA...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACGGGGACAAGGAAGGTaGCATCGTCTGCGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVRGQGR*HRLRGA
Trigger: GGCTCCCCGCAGACGATGCCACCTTCCTTGTCCCCG...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 2 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGAGGTAGAAGTGTTTCCTaGAACTGCAGCTTTGATGGA +
Preference number: 2 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRGRSVS*NCSFDG
Trigger: TCCATCAAAGCTGCAGTTCCAGGAAACACTTCTACC...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR TCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 2 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR TCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACAT +
Preference number: 2 (lower is better)
Translates to: RVETQGWRWGPADIPSCHLDRVI*VEAQEH
Trigger: ATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAG...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 2 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 2 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TTGGAGCACTCGTCCTTGTCTGCAGGGGAGCAAATAAGGGCAGACGCTGGGTCTCTTCGAAATGTCTTGTaGAAGCTCTGCTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: LEHSSLSAGEQIRADAGSLRNVL*KLCSLA
Trigger: GGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAG...AGACCCAGCGTCTGCCCTTATTTGCTCCCCTGCAGACAAGGACGAGTGCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTCATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 2 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 2 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTTACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 2 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CAA 90 bp GATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGC +
Preference number: 2 (lower is better)
Translates to: DADFAGPVIVWVVGR*NVAIVLFHITPADG
Trigger: GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGCGATGGGGTCCTGCTaGCATTCCCTCTTGCCACCA +
Preference number: 2 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWAMGSC*HSLLPP
Trigger: TGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGC...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR TCA 90 bp CTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTGTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 2 (lower is better)
Translates to: LVKLAGLGNVPLAEPCPLSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...CAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp GGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: GAGRRGPSFTSQQEMSQTQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...TGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp GGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACATGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: GAGRRGPSFTSQQEMSQTWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...TGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 2 (lower is better)
Translates to: VGRLNVAIVLFHITPADGLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 2 (lower is better)
Translates to: PPDADFAGPVIVWVVGRLDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...CAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: PGGAGDGPRALLLAGILVTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGGGTTTGTGGGGAAGTaGCTTATGCCGGAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: CHQAGPPKRGMMTSKCLVGFVGK*LMPESS
Trigger: ACTGGACTCCGGCATAAGCCACTTCCCCACAAACCC...CACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 2 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp ACAATACAGCGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCCTTCGAAATGTCTTGTaGAAGCTCTGCTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: TIQRVETQGWRWGPADIPLRNVL*KLCSLA
Trigger: GGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAG...GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CCA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAAACACAGGGATGGCGATaGGGTCCTGCTGACATTCCC +
Preference number: 2 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQTQGWR*GPADIP
Trigger: GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 2 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 2 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 2 (lower is better)
Translates to: VETQGWRWGPADIPSCHQRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSREQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GCGGCTGGACGTGCTCTTGATGTCATCAGGCTTCTCATAGCCACAGTAGCGCCCAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: AAGRALDVIRLLIATVAPNRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...GGGCGCTACTGTGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGCTGTGGATGTCACCTTGTaGTCACAGCCGGCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: YHWWMSPCGHSRLLCSRAVDVTL*SQPASL
Trigger: CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCAC...AGCACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAGGGTGTCCTCAGGGGTaGGCCTGTAGGGAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKGCPQG*ACREEW
Trigger: CCACTCCTCCCTACAGGCCCACCCCTGAGGACACCC...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR CCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGTTATACTCCTGCCCTaGCTGGATGTTCTCACGAAC +
Preference number: 2 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLVILLP*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAAC...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CATCTCCATGAAGGTCTTCTTTGCAGTCGTGCTTGTTGTCATGGAGGACGAAGCAAGTGGAGGCCTGGCTaGACTTTCTCCCACCGGGAC +
Preference number: 2 (lower is better)
Translates to: HLHEGLLCSRACCHGGRSKWRPG*TFSHRD
Trigger: GTCCCGGTGGGAGAAAGTCCAGCCAGGCCTCCACTT...GCTTCGTCCTCCATGACAACAAGCACGACTGCAAAGAAGACCTTCATGGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520970.5
3UTR-3UTR TCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 2 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGTCCTCCAAGAGGGAGTaGGCGGGAATAAGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWSSKRE*AGIRGS
Trigger: TGAGCCCCTTATTCCCGCTCACTCCCTCTTGGAGGA...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
3UTR-3UTR GCA 90 bp ACAATACAGCGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 2 (lower is better)
Translates to: TIQRVETQGWRWGPADIPWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR GCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 2 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: LVMVPLVDVTLWSQPASLQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGAAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 2 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGSVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCCTTCGAAATGTCTTGTaGAAGCTCTGCTCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: VGRLNVAIVLFHITPADGLRNVL*KLCSLA
Trigger: GGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAG...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 2 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GTTAATGGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 2 (lower is better)
Translates to: VNGPVRDELEPEAAGRALRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...AAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCCATTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 2 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 2 (lower is better)
Translates to: KGTWEGSTISRATAEKEQCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...CTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR-3UTR GCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 2 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 2 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGGTCCGGTTTCTTTTCTaGACTCGGAATTTGAGCTGG +
Preference number: 2 (lower is better)
Translates to: LVMVPLVDVTLWSQPASLVRFLF*TRNLSW
Trigger: CCAGCTCAAATTCCGAGTGCAGAAAAGAAACCGGAC...CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 2 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TCAAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCTGGAGAACGCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 2 (lower is better)
Translates to: SREHGKEAPFLEPQLRRSWRTPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGCGTTCTCCA...GCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR-3UTR CCA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAATACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 2 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAATGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 2 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 2 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 2 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 2 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp GGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 2 (lower is better)
Translates to: GAGRRGPSFTSQQEMSQTHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...TGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 2 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 2 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGTGCTTACTGGACAGATaGACAAGTGGAAAAATAGAC +
Preference number: 2 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVCLLDR*TSGKID
Trigger: GTCTATTTTTCCACTTGTCCATCTGTCCAGTAAGCA...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR GCA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCTGGGTCACCATTACCTaGTTACTGGACAGATGGACA +
Preference number: 2 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPWVTIT*LLDRWT
Trigger: TGTCCATCTGTCCAGTAAGCAGGTAATGGTGACCCA...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 2 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 2 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 2 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCTACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 2 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGGTTATACTCCTGCCCTaGCTGGATGTTCTCACGAAC +
Preference number: 2 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRVILLP*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAAC...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR TCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 2 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 2 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 2 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR GCA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 2 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 2 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR GCA 72 bp TGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: CGCLWPGRARAS*SHRSGRGRGPW
Trigger: CCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CAA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: SAGTCGCLWPGRARASCSERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR CCA 72 bp GACAAAGGGGATGACCCCATCGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCGCCGGCTACGGGATCT +
Preference number: 3 (lower is better)
Translates to: DKGDDPIGPHTL*SGRRRPPATGS
Trigger: AGATCCCGTAGCCGGCGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCCGATGGGGTCATCCCCTTTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CAA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR GCA 72 bp TGGGAGGCCAGGCGACAAGGGGGTCCAAAGGGGCACTaGATCCAGCAGGACCAGCTGAGCAGGGCCCAGCTG +
Preference number: 3 (lower is better)
Translates to: WEARRQGGPKGH*IQQDQLSRAQL
Trigger: CAGCTGGGCCCTGCTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCCTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTACCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 3 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR GCA 72 bp AGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTG +
Preference number: 3 (lower is better)
Translates to: RRPRAAGSSPRP*SGSGHFLLWSV
Trigger: CACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR CCA 72 bp TCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACACCTCTAGGTGGTCGT +
Preference number: 3 (lower is better)
Translates to: SCSHRSGRGRGP*RLARRTPLGGR
Trigger: ACGACCACCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR TCA 72 bp TGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTaGGAGAAGCCCTGTCTTGTTTCTCCATCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: CGALVWLTGHWA*EKPCLVSPSPP
Trigger: GGGAGGGGATGGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGGAGAGAAGCCCTGTCTaGTTTCTCCATCCCCTCCCC +
Preference number: 3 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRERSPV*FLHPLP
Trigger: GGGGAGGGGATGGAGAAACAAGACAGGGCTTCTCTC...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp CGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCAACACTTTCGGTTTATaGGCTGCGGTGCCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: RASCSHRSGRGRGPWRLANTFGL*AAVPWC
Trigger: ACACCAGGGCACCGCAGCCAATAAACCGAAAGTGTT...GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520970.5
3UTR-3UTR CAA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: GSGFLLPQKRPRTGALASRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCTCCATGAAGGTCAGCTaGACCCGGTGCCCGGGGGTG +
Preference number: 3 (lower is better)
Translates to: PGGAGDGPRALLLAGILVSMKVS*TRCPGV
Trigger: CACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGA...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR GCA 72 bp TCGATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTaGCCGGGGGTGCTGGAGATGGCCCACGTGCACTCC +
Preference number: 3 (lower is better)
Translates to: SMSISMKVSLTR*PGVLEMAHVHS
Trigger: GGAGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp GGCAGCAGGCTCCAGTCCCCGCCCCTGCTCAGGCAGTaGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTT +
Preference number: 3 (lower is better)
Translates to: GSRLQSPPLLRQ*SLPAVECVLEL
Trigger: AAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGAGCCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 3 (lower is better)
Translates to: CSHERWKRGGPGLAECVRERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTGAAGCCACTGCGGCATaGGCACTCATAACTGCCGAA +
Preference number: 3 (lower is better)
Translates to: LRCPGVADRPLGLREALSEATAA*ALITAE
Trigger: TTCGGCAGTTATGAGTGCCAATGCCGCAGTGGCTTC...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGAAGCCACTGCGGCATaGGCACTCATAACTGCCGAA +
Preference number: 3 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPREATAA*ALITAE
Trigger: TTCGGCAGTTATGAGTGCCAATGCCGCAGTGGCTTC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CAA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 3 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGCCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 3 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 3 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR GCA 72 bp CCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCC +
Preference number: 3 (lower is better)
Translates to: PSYLSRSAGTCG*LWPGRARASCS
Trigger: GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR GCA 72 bp GCTGGACCGAGTTATCTGAGTAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCT +
Preference number: 3 (lower is better)
Translates to: AGPSYLSRSAGT*GCLWPGRARAS
Trigger: AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR CCA 72 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCC +
Preference number: 3 (lower is better)
Translates to: VAYAGVQFPHLL*TVSPGHWPCRS
Trigger: GGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 3 (lower is better)
Translates to: SAGTCGCLWPGRARASCSWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 3 (lower is better)
Translates to: GSGFLLPQKRPRTGALASHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGTTCTGCACTCGGAATTaGAGCTGGTGGGGGCGTCCC +
Preference number: 3 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQFCTRN*SWWGRP
Trigger: GGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGAA...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR TCA 72 bp ACTTTCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTG +
Preference number: 3 (lower is better)
Translates to: TFGLLAAVPWCG*PATGPERSPVL
Trigger: CAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520970.5
3UTR TCA 72 bp GGAGGCCTGGAAGCCCTTTCGCTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGC +
Preference number: 3 (lower is better)
Translates to: GGLEALSLDRVI*VEAQEHAAACG
Trigger: GCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAGCGAAAGGGCTTCCAGGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR CCA 72 bp TATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGA +
Preference number: 3 (lower is better)
Translates to: YLSRSAGTCGCL*PGRARASCSHR
Trigger: TCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CAA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 3 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 3 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: GPVRDELEPEAAGRALDVVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GGCTGGGACTCGATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 3 (lower is better)
Translates to: GWDSMSISMKVSLTRCPGPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...CCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATCGAGTCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTCGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 3 (lower is better)
Translates to: CHQAGPPKRGMMTSKCLVASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...CACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 3 (lower is better)
Translates to: RREHQFCPARGRWAGMAEALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGAAGCCACTGCGGCATaGGCACTCATAACTGCCGAA +
Preference number: 3 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAEATAA*ALITAE
Trigger: TTCGGCAGTTATGAGTGCCAATGCCGCAGTGGCTTC...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR-3UTR CAA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCATCACAGCCGGCTTCTTaGCAGTCGTGCTTGTTGTCA +
Preference number: 3 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPSQPAS*QSCLLS
Trigger: TGACAACAAGCACGACTGCAAAGAAGCCGGCTGTGA...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACTTGGAGCACTCGTCCTaGTCTGCAGGGGAGCAAATA +
Preference number: 3 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHLEHSS*SAGEQI
Trigger: TATTTGCTCCCCTGCAGACAAGGACGAGTGCTCCAA...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR-3UTR CAA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTTGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTGATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 3 (lower is better)
Translates to: LVKLAGLGNVPLAEPCPLIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...CAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTTCACAGCCCCCGCGGTaGGGCCGAGAGCACTCGTCC +
Preference number: 3 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGSQPPR*GREHSS
Trigger: GGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGA...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAAGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 3 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 3 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 3 (lower is better)
Translates to: LGLVMVPLVDVTLWSQPALVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...AGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 3 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 3 (lower is better)
Translates to: GPVRDELEPEAAGRALDVPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGTGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GTTAATGGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTTCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 3 (lower is better)
Translates to: VNGPVRDELEPEAAGRALSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...AAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCCATTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 3 (lower is better)
Translates to: LGLVMVPLVDVTLWSQPAMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...AGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: PGGAGDGPRALLLAGILVSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGTACTTGTCAGGCCAGTaGGGGCTGGTGATGGTACCA +
Preference number: 3 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVYLSGQ*GLVMVP
Trigger: TGGTACCATCACCAGCCCCAACTGGCCTGACAAGTA...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTCACGTGCACTCCTTCTaGCTGGGATACTTGTCAGGC +
Preference number: 3 (lower is better)
Translates to: LGLVMVPLVDVTLWSQPAHVHSF*LGYLSG
Trigger: GCCTGACAAGTATCCCAGCAAGAAGGAGTGCACGTG...AGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACAGGTGGAAACCTTTTTaGGTGATGGTGTCATCCGAG +
Preference number: 3 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHRWKPF*VMVSSE
Trigger: CTCGGATGACACCATCACCAAAAAAGGTTTCCACCT...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCTTGGAGCACTCGTCCTaGTCTGCAGGGGAGCAAATA +
Preference number: 3 (lower is better)
Translates to: WLMPESSSPTSYGQSHQALEHSS*SAGEQI
Trigger: TATTTGCTCCCCTGCAGACAAGGACGAGTGCTCCAA...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATCCTGGAACTGCAGCTTaGATGGAGGACTTACGAGCT +
Preference number: 3 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDPGTAA*MEDLRA
Trigger: AGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAGG...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
3UTR TCA 72 bp TGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAATGGGAGGTTTCACCC +
Preference number: 3 (lower is better)
Translates to: CKACGLGQCPPC*AVSFGQWEVSP
Trigger: GGGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp GCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACCCCGTTCACCTCATAC +
Preference number: 3 (lower is better)
Translates to: AWAMSPLLSRVL*PMGGFTPFTSY
Trigger: GTATGAGGTGAACGGGGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 3 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 3 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 3 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAACCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 3 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 3 (lower is better)
Translates to: LGLVMVPLVDVTLWSQPAEKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...AGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGTCTTTGCAGTCGTGCTaGTTGTCATGGAGGACGAAG +
Preference number: 3 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLSLQSC*LSWRTK
Trigger: CTTCGTCCTCCATGACAACAAGCACGACTGCAAAGA...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
3UTR GCA 72 bp ATGACCTCGGGCTTCTCAGAACCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTGAGTCCACTGCGCACC +
Preference number: 3 (lower is better)
Translates to: MTSGFSEPQNLP*SLESAVSPLRT
Trigger: GGTGCGCAGTGGACTCACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTGAGAAGCCCGAGGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR GCA 72 bp GTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTaGTTGTTGTCATGGAGGACGAAGCCACTGCGGCAT +
Preference number: 3 (lower is better)
Translates to: VTLWSQPASLQS*LLSWRTKPLRH
Trigger: ATGCCGCAGTGGCTTCGTCCTCCATGACAACAAGCACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp CAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGATGCAGTTCTTGTTGG +
Preference number: 3 (lower is better)
Translates to: QRSQTAGRCGTG*GPPAARCSSCW
Trigger: CCAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp GGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTaGTCACAGCCGGCTTCTTTGCAGTCGTGCTTGTTG +
Preference number: 3 (lower is better)
Translates to: GLVMVPLVDVTL*SQPASLQSCLL
Trigger: CAACAAGCACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 3 (lower is better)
Translates to: VGRLNVAIVLFHITPADGAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAAGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 3 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCCACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 3 (lower is better)
Translates to: LLIATVAPDEGAALTVPVHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp TACACAATACAGCGTGTAGAGACACAGGGATGGCGATaGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCA +
Preference number: 3 (lower is better)
Translates to: YTIQRVETQGWR*GPADIPSCHQA
Trigger: TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR CCA 72 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTT +
Preference number: 3 (lower is better)
Translates to: PPDADFAGPVIV*VVGRLNVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp TCAGGAAGAGTCCTGTCCAGCAGAGGGCCTGGTGAATaGAGGACTCAAGGGAACATGGGAAGGAAGCACCAT +
Preference number: 3 (lower is better)
Translates to: SGRVLSSRGPGE*RTQGNMGRKHH
Trigger: ATGGTGCTTCCTTCCCATGTTCCCTTGAGTCCTCCATTCACCAGGCCCTCTGCTGGACAGGACTCTTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR-3UTR CAA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTATGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTAGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 3 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGTACTTGCACACATCATaGCCCTCTGTCTCAAAGAAG +
Preference number: 3 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQYLHTS*PSVSKK
Trigger: CTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTA...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
3UTR-3UTR CAA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTTCACAGCCGGCTTCTTaGCAGTCGTGCTTGTTGTCA +
Preference number: 3 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRSQPAS*QSCLLS
Trigger: TGACAACAAGCACGACTGCAAAGAAGCCGGCTGTGA...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
3UTR TCA 72 bp AGATGCCCCTGGAGAATGTGTTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGGTCTCCCCCAGGGACT +
Preference number: 3 (lower is better)
Translates to: RCPWRMCSERNA*CCRSHRSPPGT
Trigger: AGTCCCTGGGGGAGACCTATGACTTCGACAGCATCATGCATTACGCTCGGAACACATTCTCCAGGGGCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR GCA 72 bp GGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTaGTTACTGGACAGATGGACAAGTGGAAAAATAGAC +
Preference number: 3 (lower is better)
Translates to: GGPSGPAWVTIT*LLDRWTSGKID
Trigger: GTCTATTTTTCCACTTGTCCATCTGTCCAGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR-3UTR CAA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 3 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCACCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 3 (lower is better)
Translates to: WVVGRLNVAIVLFHITPAPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...TGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAATGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 3 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 3 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 3 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 3 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACCGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 3 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 3 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 3 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CCA 72 bp TGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCATAGTCCTTTTTCACAT +
Preference number: 3 (lower is better)
Translates to: CRLCWAGNRLGS*AIECGHSPFSH
Trigger: ATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 3 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKEKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGGGCCCCCGCACTCTGTaGCGTGGGAGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: WLRCPGVADRPLGLREALGPRTL*RGRPGS
Trigger: GCTTCCAGGCCTCCCACGCCACAGAGTGCGGGGGCC...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
3UTR CAA 72 bp ATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTaGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: MRLPVARTGSGF*LPQKRPRTGAL
Trigger: CAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGARTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGGGTGCCCGGGGGTGCTaGAGATGGCCCACGTGCACT +
Preference number: 4 (lower is better)
Translates to: QKRPRTGALASRPSNTSRGARGC*RWPTCT
Trigger: AGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACC...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCGGCCCCCGCACTCTGTaGCGTGGGAGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPGPRTL*RGRPGS
Trigger: GCTTCCAGGCCTCCCACGCCACAGAGTGCGGGGGCC...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTATGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGAGGGAAGCGGCGCACTaGAGGCCAGGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRREAAH*RPGEGV
Trigger: GACGCCCTCCCCTGGCCTCCAGTGCGCCGCTTCCCT...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGCTGGCCAGGCCAGGTaGCCGGGAGTGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGAGQAR*PGVGGQ
Trigger: CTGGCCTCCCACTCCCGGCCACCTGGCCTGGCCAGC...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGCTGGCCAGGCCAGGTaGCCGGGAGTGGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPAGQAR*PGVGGQ
Trigger: CTGGCCTCCCACTCCCGGCCACCTGGCCTGGCCAGC...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCAACTGCCGAACGTGTTaGCGCAGTCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGANCRTC*RSPAGS
Trigger: GCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGTT...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTGTCAGCTTGACCCGGTaGCCGGGGGTGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: RDVAARRLRDLPLHLPQAVSLTR*PGVLEM
Trigger: CATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGAC...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR GCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: WLRCPGVADRPLGLREALRARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: ESTSSVRPEGGGPEWQSGGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...TCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCACGTCTGCCCGTACCTaGCCCCCGCACTCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: SAGTCGCLWPGRARASCSTSART*PPHSVA
Trigger: CGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGT...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTGTCTCACCAGGCCATTaGCCCTGCAGGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GSGFLLPQKRPRTGALASVSPGH*PCRSWG
Trigger: GCCCCAGGACCTGCAGGGCCAATGGCCTGGTGAGAC...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGCTGAGCAGGGCCCAGTGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: QGGPKGHCIQQDQLSRAQCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...CTGGGCCCTGCTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGAQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGAVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCT +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPAGTCG*LWPGRA
Trigger: AGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGC...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTCTTGGTCTTCACGTCTaGCCGTACCTGGCCCCCGCA +
Preference number: 4 (lower is better)
Translates to: RDVAARRLRDLPLHLPQALGLHV*PYLAPA
Trigger: TGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAG...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR CCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGANVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGCGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACA +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRRGRGP*RLARRT
Trigger: TGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCG...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCACGTCTGCCCGTACCTaGCCCCCGCACTCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGTSART*PPHSVA
Trigger: CGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGT...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGCTGAGGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: GQATRGSKGALHPAGPAEAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...CTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCGTCTCACCAGGCCATTaGCCCTGCAGGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPVSPGH*PCRSWG
Trigger: GCCCCAGGACCTGCAGGGCCAATGGCCTGGTGAGAC...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTGTCTCACCAGGCCATTaGCCCTGCAGGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LRCPGVADRPLGLREALSVSPGH*PCRSWG
Trigger: GCCCCAGGACCTGCAGGGCCAATGGCCTGGTGAGAC...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAATCGGCTCCCCACGGTaGCTCCTGGGGGACATGCAC +
Preference number: 4 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLIGSPR*LLGDMH
Trigger: GTGCATGTCCCCCAGGAGCCACCGTGGGGAGCCGAT...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCTGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGATGCGGTGCCCTGGTGTaGCTGACCGGCCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRCGALV*LTGHWA
Trigger: GGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCA...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGCCAGGTGGCCGGGAGTaGGAGGCCAGGCGACAAGGG +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGPGGRE*EARRQG
Trigger: CCCTTGTCGCCTGGCCTCCCACTCCCGGCCACCTGG...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGADLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: LSRSAGTCGCLWPGRARATSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCCCCGGTGCCCGGGGGTaGTGGAGATGGCCCACGTGC +
Preference number: 4 (lower is better)
Translates to: LLIATVAPDEGAALTVPVPGARG*WRWPTC
Trigger: GCACGTGGGCCATCTCCAGCACCCCCGGGCACCGGG...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRSSPRP*SGSGHF
Trigger: GAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGA...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGAGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGTCTCGCCCGCTTGCTTaGTCGATCGCGACCGCGACC +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPSRPLA*SIATAT
Trigger: GGTCGCGGTCGCGATCGAGCAAGCAAGCGGGCGAGA...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520970.5
CDS-3UTR CCA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: RDVAARRLRDLPLHLPQACPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR CCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GVLLTFPLATRQGPLREESCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TCAGGAAGTTATACTCCTGCCCTGAGGGTCCGGGGAGCAGCCAAGGGGAGCCTGTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SGSYTPALRVRGAAKGSLSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...CAGGCTCCCCTTGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAACTTCCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAESCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: GRREHQFCPARGRWAGMATAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...TGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGAACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGCCTGGCAGGCCTCACTaGGGGGTCCGGTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: QKRPRTGALASRPSNTSRPGRPH*GVRFLF
Trigger: GAAAAGAAACCGGACCCCCCAGTGAGGCCTGCCAGG...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCGGTGCCCGGGGGTGCTaGAGATGGCCCACGTGCACT +
Preference number: 4 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAGARGC*RWPTCT
Trigger: AGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACC...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACCGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACA +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNRGRGP*RLARRT
Trigger: TGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCG...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQTCGCL*PGRARA
Trigger: AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGT...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCGCACTCTGTGGCGTaGGAGGCCTGGAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRPHSVA*EAWKPF
Trigger: AAAGGGCTTCCAGGCCTCCCACGCCACAGAGTGCGG...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCGGCCCCCGCACTCTGTaGCGTGGGAGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PGGAGDGPRALLLAGILVGPRTL*RGRPGS
Trigger: GCTTCCAGGCCTCCCACGCCACAGAGTGCGGGGGCC...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTGGCCCCCGCACTCTGTaGCGTGGGAGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTGPRTL*RGRPGS
Trigger: GCTTCCAGGCCTCCCACGCCACAGAGTGCGGGGGCC...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGCCCCTGCTCAGGCAGTaGTCACTTCCTGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: QKRPRTGALASRPSNTSRPLLRQ*SLPAVE
Trigger: CTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGG...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGATCGGCTCCCCACGGTaGCTCCTGGGGGACATGCAC +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVIGSPR*LLGDMH
Trigger: GTGCATGTCCCCCAGGAGCCACCGTGGGGAGCCGAT...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAAGGGAAGCGGCGCACTaGAGGCCAGGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAREAAH*RPGEGV
Trigger: GACGCCCTCCCCTGGCCTCCAGTGCGCCGCTTCCCT...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGTAGGAGCAGCACCTaGAGGGCGGGGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPRRSST*RAGPAQ
Trigger: CTGAGCTGGCCCCGCCCTCCAGGTGCTGCTCCTACG...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: WLRCPGVADRPLGLREALELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCGCGATGGGGTCCTGCTaGCATTCCCTCTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: SAGTCGCLWPGRARASCSAMGSC*HSLLPP
Trigger: TGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGC...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: RASCSHRSGRGRGPWRLALPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: QKRPRTGALASRPSNTSRVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCGTGTTGACGCAGTCCTaGTGGCAGCCGCCGTTATCC +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPVLTQS*WQPPLS
Trigger: GGATAACGGCGGCTGCCAGCAGGACTGCGTCAACAC...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCGTCAGCTTGACCCGGTaGCCGGGGGTGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGVSLTR*PGVLEM
Trigger: CATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGAC...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGRARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNRARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCCTTGGTCTTCACGTCTaGCCGTACCTGGCCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGLGLHV*PYLAPA
Trigger: TGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAG...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGSSPRP*SGSGHF
Trigger: GAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGA...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTTCTCGCCCGCTTGCTTaGTCGATCGCGACCGCGACC +
Preference number: 4 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGSRPLA*SIATAT
Trigger: GGTCGCGGTCGCGATCGAGCAAGCAAGCGGGCGAGA...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520970.5
CDS-3UTR GCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACGTCCTCTCGCCCGCTTaGTTGCTCGATCGCGACCGC +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNVLSPA*LLDRDR
Trigger: GCGGTCGCGATCGAGCAAGCAAGCGGGCGAGAGGAC...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520970.5
CDS-3UTR CCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATCACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAACACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGCCGGCCAGAGGGAGGTaGGCCGGAATGGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAEPARGR*AGMAEW
Trigger: CCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGG...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAACCGGCCAGAGGGAGGTaGGCCGGAATGGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQPARGR*AGMAEW
Trigger: CCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGG...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTGCCCCAGGAAACTaGGGTGGTGGAATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LRCPGVADRPLGLREALSCAPGN*GGGMGA
Trigger: AGCCCCCATTCCACCACCCCAGTTTCCTGGGGCACA...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGTGGGGAGAGGAGGATaGGGGTCCGAGCGGACCAGC +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNVGRGG*GSERTS
Trigger: GCTGGTCCGCTCGGACCCCCATCCTCCTCTCCCCAC...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGGTGGGGAGAGGAGGATaGGGGTCCGAGCGGACCAGC +
Preference number: 4 (lower is better)
Translates to: FPHLLWTVSPGHWPCRSWVGRGG*GSERTS
Trigger: GCTGGTCCGCTCGGACCCCCATCCTCCTCTCCCCAC...CCAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGCCAGGTGGCCGGGAGTaGGAGGCCAGGCGACAAGGG +
Preference number: 4 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGPGGRE*EARRQG
Trigger: CCCTTGTCGCCTGGCCTCCCACTCCCGGCCACCTGG...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTAACAGCTGGCAGAGCTaGCCAGGCCAGGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTNSWQS*PGQVAG
Trigger: CCCGGCCACCTGGCCTGGCCAGCTCTGCCAGCTGTT...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTCGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: SRSAGTCGCLWPGRARASRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCCTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGALDRVI*VEAQEH
Trigger: ATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAG...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGCTCCTCAGGAGGCCCTaGGCCACAGTAGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQLLRRP*ATVAPQ
Trigger: CTGGGGCGCTACTGTGGCTCAGGGCCTCCTGAGGAG...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RASCSHRSGRGRGPWRLAPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCT +
Preference number: 4 (lower is better)
Translates to: VPPPPMDSLTRPLALQVLAGTCG*LWPGRA
Trigger: AGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGC...CAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPRSAGT*GCLWPG
Trigger: TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCT...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTTTCGGTTTATTGGCTaGGGTGCCCTGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WLRCPGVADRPLGLREALFRFIG*GALVWL
Trigger: CAGCCACACCAGGGCACCGCAGCCAATAAACCGAAA...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGGGCTGAGGTTGGGATaGCCCAGGGGAAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VPPPPMDSLTRPLALQVLGLRLG*PRGSGG
Trigger: GCCTCCACTTCCCCTGGGGCATCCCAACCTCAGCCC...CAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCACAGCCTGCTGTACCTaGAAGGCCCTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPTACCT*KALRSS
Trigger: AGAGGACCTGAGGGCCTTCCAGGTACAGCAGGCTGT...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: GSGFLLPQKRPRTGALASLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGCACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGCCTGGCAGGCCTCACTaGGGGGTCCGGTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVPGRPH*GVRFLF
Trigger: GAAAAGAAACCGGACCCCCCAGTGAGGCCTGCCAGG...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGACGGGGGTGCTGGAGATaGCCCACGTGCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRRGCWR*PTCTPS
Trigger: AGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCG...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGGGGGTGCTGGAGATaGCCCACGTGCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPRGCWR*PTCTPS
Trigger: AGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCG...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDTCGCL*PGRARA
Trigger: AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGT...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGACCGCACTCTGTGGCGTaGGAGGCCTGGAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRPHSVA*EAWKPF
Trigger: AAAGGGCTTCCAGGCCTCCCACGCCACAGAGTGCGG...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCCGCACTCTGTGGCGTaGGAGGCCTGGAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRPHSVA*EAWKPF
Trigger: AAAGGGCTTCCAGGCCTCCCACGCCACAGAGTGCGG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTCCCCTGCTCAGGCAGTaGTCACTTCCTGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LSRSAGTCGCLWPGRARAPLLRQ*SLPAVE
Trigger: CTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGG...AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCACACAGGGATGGCGATaGGGTCCTGCTGACATTCCC +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPTQGWR*GPADIP
Trigger: GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCACGGTGGCTCCTaGGGGACATGCACAGACACT +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGPHGGS*GTCTDT
Trigger: AGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGGG...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGATCGGCTCCCCACGGTaGCTCCTGGGGGACATGCAC +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGIGSPR*LLGDMH
Trigger: GTGCATGTCCCCCAGGAGCCACCGTGGGGAGCCGAT...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAAACAGCTGGCAGAGCTaGCCAGGCCAGGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ETQGWRWGPADIPSCHQANSWQS*PGQVAG
Trigger: CCCGGCCACCTGGCCTGGCCAGCTCTGCCAGCTGTT...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAACGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCACGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRARQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp GGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GRREHQFCPARGRWAGMAAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...TGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGAGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGCCAGTTGGGGCTGGTaGTGGTACCACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQASWGW*WYHWWM
Trigger: CATCCACCAGTGGTACCATCACCAGCCCCAACTGGC...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTGCCAGTTGGGGCTGGTaGTGGTACCACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SRSAGTCGCLWPGRARASASWGW*WYHWWM
Trigger: CATCCACCAGTGGTACCATCACCAGCCCCAACTGGC...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGAGCGATGGGGTCCTGCTaGCATTCCCTCTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRAMGSC*HSLLPP
Trigger: TGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGC...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGCGATGGGGTCCTGCTaGCATTCCCTCTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRAMGSC*HSLLPP
Trigger: TGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGC...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTGTTATACTCCTGCCCTaGGGGTCCGGGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTVILLP*GSGEQP
Trigger: TGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAAC...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354870.5
CDS-3UTR GCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPDLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGTGGTCGCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: RPRTGALASRPSNTSRWSQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...CGACCACCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGADGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGACCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: ESTSSVRPEGGGPEWQSGPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...TCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAEVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAACAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGGAGGACGAAGCCACTaGGGCATTGGCACTCATAAC +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRGGRSH*GIGTHN
Trigger: GTTATGAGTGCCAATGCCGCAGTGGCTTCGTCCTCC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp AGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCCCGGTGCCCGGGGGTaGTGGAGATGGCCCACGTGC +
Preference number: 4 (lower is better)
Translates to: RNDDFEMSCGSSAPWPQPPGARG*WRWPTC
Trigger: GCACGTGGGCCATCTCCAGCACCCCCGGGCACCGGG...GGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp ACAATACAGCGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCCCCGGTGCCCGGGGGTaGTGGAGATGGCCCACGTGC +
Preference number: 4 (lower is better)
Translates to: TIQRVETQGWRWGPADIPPGARG*WRWPTC
Trigger: GCACGTGGGCCATCTCCAGCACCCCCGGGCACCGGG...GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATGTCAGCTTGACCCGGTaGCCGGGGGTGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDVSLTR*PGVLEM
Trigger: CATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGAC...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCT +
Preference number: 4 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQAGTCG*LWPGRA
Trigger: AGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGC...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCAAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPRSAGT*GCLWPG
Trigger: TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCT...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCGCAGTGGTCACTTCCTaGTGTGGAGTGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPAVVTS*CGVCPG
Trigger: TCCAGGACACACTCCACAGCAGGAAGTGACCACTGC...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: PGVADRPLGLREALSCFSSSPRP*SGSGHF
Trigger: GAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGA...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAAGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GVLLTFPLATRQGPLREEADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGGCTCCTGGGGGACATaGACAGACACTTGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQGSWGT*TDTCAP
Trigger: TGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCC...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGCTGGGACTCGATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTTTATTGGCTGCGGTaGCCTGGTGTGGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: GWDSMSISMKVSLTRCPGVYWLR*PGVADR
Trigger: CCGGTCAGCCACACCAGGGCACCGCAGCCAATAAAC...CCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATCGAGTCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCGTCCTCTCGCCCGCTTaGTTGCTCGATCGCGACCGC +
Preference number: 4 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPVLSPA*LLDRDR
Trigger: GCGGTCGCGATCGAGCAAGCAAGCGGGCGAGAGGAC...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000518913.5
CDS-3UTR GCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACCAGACGCTGGGTCTGTaGAGGGCTGAGGTTGGGATG +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNQTLGL*RAEVGM
Trigger: CATCCCAACCTCAGCCCTGCACAGACCCAGCGTCTG...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAACGCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ERLAGCSHERWKRGGPGLSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGCGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLIATVAPDEGAALTVPVSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PGVADRPLGLREALSCFSRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: LRCPGVADRPLGLREALSCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 4 (lower is better)
Translates to: RASCSHRSGRGRGPWRLAHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...GGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAACACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCGGCTGGACGTGCTCTTGATGTCATCAGGCTTCTCATAGCCACAGTAGCGCCCACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: AAGRALDVIRLLIATVAPTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...GGGCGCTACTGTGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACGGTGCCCGGGGGTGCTaGAGATGGCCCACGTGCACT +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHGARGC*RWPTCT
Trigger: AGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACC...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQTCGCL*PGRARA
Trigger: AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGT...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCGTGGCGTGGGAGGCCTaGAAGCCCTTTCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGVAWEA*KPFRWT
Trigger: GGTCCAGCGAAAGGGCTTCCAGGCCTCCCACGCCAC...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGGTGGCGTGGGAGGCCTaGAAGCCCTTTCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGVAWEA*KPFRWT
Trigger: GGTCCAGCGAAAGGGCTTCCAGGCCTCCCACGCCAC...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGGCCCCCGCACTCTGTaGCGTGGGAGGCCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LCRSPVPPPPMDSLTRPLGPRTL*RGRPGS
Trigger: GCTTCCAGGCCTCCCACGCCACAGAGTGCGGGGGCC...CAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACACGTCTGCCCGTACCTaGCCCCCGCACTCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDTSART*PPHSVA
Trigger: CGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGT...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCACGTCTGCCCGTACCTaGCCCCCGCACTCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVTSART*PPHSVA
Trigger: CGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGT...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTCCCAGGAAACTGGGGTaGTGGAATGGGGGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: LRCPGVADRPLGLREALSPRKLG*WNGGSK
Trigger: TTTTGAGCCCCCATTCCACCACCCCAGTTTCCTGGG...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCCCAGGAAACTGGGGTaGTGGAATGGGGGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPPRKLG*WNGGSK
Trigger: TTTTGAGCCCCCATTCCACCACCCCAGTTTCCTGGG...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGTGTGCCCCAGGAAACTaGGGTGGTGGAATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGCAPGN*GGGMGA
Trigger: AGCCCCCATTCCACCACCCCAGTTTCCTGGGGCACA...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCCCCACGGTGGCTCCTaGGGGACATGCACAGACACT +
Preference number: 4 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPPHGGS*GTCTDT
Trigger: AGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGGG...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
63% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TCAGGAAGTTATACTCCTGCCCTGAGGGTCCGGGGAGCAGCCAAGGGGAGCCTGCAGCCAAGGGGAGCCTaGGGAATGGGGAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SGSYTPALRVRGAAKGSLQPRGA*GMGRVS
Trigger: TGAGACCCTCCCCATTCCCCAGGCTCCCCTTGGCTG...CAGGCTCCCCTTGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAACTTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR TCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGACAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR TCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCAACTGCCGAACGTGTTaGCGCAGTCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPNCRTC*RSPAGS
Trigger: GCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGTT...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGDLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: WLMPESSSPTSYGQSHQAGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: LLIATVAPDEGAALTVPVGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GAACGCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: ERLAGCSHERWKRGGPGLGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...CAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR GCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCACAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRREHQFCPARGRWAGMAQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...TGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: WLRCPGVADRPLGLREALQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: TGWALVKLAGLGNVPLAERARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTCGGGCTCGGGCTTCTTaGTCCCACAGAAGCGGCCGA +
Preference number: 4 (lower is better)
Translates to: CSHERWKRGGPGLAECVRRARAS*SHRSGR
Trigger: TCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCG...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCT +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSAGTCG*LWPGRA
Trigger: AGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGC...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGGCAGGAACATGCGGCTaGCTGTGGCCAGGACGGGCT +
Preference number: 4 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVAGTCG*LWPGRA
Trigger: AGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGC...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGCTGGGACTCGATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GWDSMSISMKVSLTRCPGWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...CCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATCGAGTCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACTCTCGCCCGCTTGCTTaGTCGATCGCGACCGCGACC +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHSRPLA*SIATAT
Trigger: GGTCGCGGTCGCGATCGAGCAAGCAAGCGGGCGAGA...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520970.5
CDS-3UTR GCA 90 bp GAACAGGCCAAGGTCCTCCAAGAGGGAGTGAGCGGGAATAAGGGGCTCAGGGAAGGCGGTCCTGGGAGGTaGAGGAAAGGGAGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: EQAKVLQEGVSGNKGLREGGPGR*RKGSSS
Trigger: CGAGCTGCTCCCTTTCCTGCACCTCCCAGGACCGCC...TTCCCTGAGCCCCTTATTCCCGCTCACTCCCTCTTGGAGGACCTTGGCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTGAAGGTGGCATCGTCTaGGGGGAGCCCCTGCCATGG +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSEGGIV*GEPLPW
Trigger: CCATGGCAGGGGCTCCCCGCAGACGATGCCACCTTC...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCCTACAGTGCCCAAATaGCCCGGAAGGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQPTVPK*PGRWQG
Trigger: CCCCTGCCACCTTCCGGGGCATTTGGGCACTGTAGG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTACAGCCTGCTGTACCTaGAAGGCCCTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGTACCT*KALRSS
Trigger: AGAGGACCTGAGGGCCTTCCAGGTACAGCAGGCTGT...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGASEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATTCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCACAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: ETQGWRWGPADIPSCHQAQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: LLIATVAPDEGAALTVPVRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGCTGAGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: GQATRGSKGALHPAGPAEPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: LSRSAGTCGCLWPGRARALSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGREQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 4 (lower is better)
Translates to: HRSGRGRGPWRLARRTPLGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...TAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: GRREHQFCPARGRWAGMANVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...TGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GACGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: DVKFRMIFSPGVTEMRHTHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...CGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLIATVAPDEGAALTVPVRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGTCGTGCTTGTTGTCATaGAGGACGAAGCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRSCLLS*RTKPLR
Trigger: CCGCAGTGGCTTCGTCCTCCATGACAACAAGCACGA...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSTCGCL*PGRARA
Trigger: AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGT...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCGTGGCGTGGGAGGCCTaGAAGCCCTTTCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVVAWEA*KPFRWT
Trigger: GGTCCAGCGAAAGGGCTTCCAGGCCTCCCACGCCAC...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCTCCACCTCAAAGGTCTaGAACACGAGCTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGSTSKV*NTSSTP
Trigger: CGGCGTGGAGCTCGTGTTCCAGACCTTTGAGGTGGA...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GACGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGGCAGGTCCTGGGGCCTaGGGGAGAGGGATGGTGCGT +
Preference number: 4 (lower is better)
Translates to: DVKFRMIFSPGVTEMRHTAGPGA*GRGMVR
Trigger: ACGCACCATCCCTCTCCCCCAGGCCCCAGGACCTGC...CGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LSRSAGTCGCLWPGRARAFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 4 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGTAGAGACACAGGGATaGCGATGGGGTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQVETQG*RWGPAD
Trigger: GTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGGTAGAGACACAGGGATaGCGATGGGGTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGVETQG*RWGPAD
Trigger: GTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCAGAGGGCCTGGTGAATGGAGGACTCAAGGGAACATGGGAAGGAAGCACCATTAGGGAAGCGGCGCACTaGAGGCCAGGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: AEGLVNGGLKGTWEGSTIREAAH*RPGEGV
Trigger: GACGCCCTCCCCTGGCCTCCAGTGCGCCGCTTCCCT...AATGGTGCTTCCTTCCCATGTTCCCTTGAGTCCTCCATTCACCAGGCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGCAGCCAAGGGGAGCCTaGGGAATGGGGAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKQPRGA*GMGRVS
Trigger: TGAGACCCTCCCCATTCCCCAGGCTCCCCTTGGCTG...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000483364.5
CDS-3UTR CCA 90 bp GAACAGGCCAAGGTCCTCCAAGAGGGAGTGAGCGGGAATAAGGGGCTCAGGGAAGGGTGTCCTCAGGGGTaGGCCTGTAGGGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: EQAKVLQEGVSGNKGLREGCPQG*ACREEW
Trigger: CCACTCCTCCCTACAGGCCCACCCCTGAGGACACCC...TTCCCTGAGCCCCTTATTCCCGCTCACTCCCTCTTGGAGGACCTTGGCCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCGGGGAGCCCCTGCCATaGGGAAGGGCTGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAGEPLP*GRAEMW
Trigger: CCACATCTCAGCCCTTCCCCATGGCAGGGGCTCCCC...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp GGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGCTGAGCCGAGCGGACCAGCATaGGTCACCATTACCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GQATRGSKGALHPAGPAEPSGPA*VTITCL
Trigger: TAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGG...CTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: PGGAGDGPRALLLAGILVQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAACAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: GVLLTFPLATRQGPLREEQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTCGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: CSHERWKRGGPGLAECVRRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp GGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: GSGLCRSPVPPPPMDSLTSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...GGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGAACTGCCGAACGTGTTaGCGCAGTCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMNCRTC*RSPAGS
Trigger: GCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGTT...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRLDRVI*VEAQEH
Trigger: ATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAG...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCTTCCTCGGCCACAATaGCCCACTCACAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPLPRPQ*PTHSPH
Trigger: GTGTGGACTGTGAGTGGGTCATTGTGGCCGAGGAAG...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCACAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVAQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CSHERWKRGGPGLAECVRQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518656.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: CSHERWKRGGPGLAECVRGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518656.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAACAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GVLLTFPLATRQGPLREEQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTTAATGGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: VNGPVRDELEPEAAGRALTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...AAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCCATTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: WLRCPGVADRPLGLREALPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: RDVAARRLRDLPLHLPQAPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR GCA 90 bp GGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 4 (lower is better)
Translates to: GRREHQFCPARGRWAGMAARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...TGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TGWALVKLAGLGNVPLAEVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAEVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTGTTGACGCAGTCCTaGTGGCAGCCGCCGTTATCC +
Preference number: 4 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQVLTQS*WQPPLS
Trigger: GGATAACGGCGGCTGCCAGCAGGACTGCGTCAACAC...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATGTGTTGACGCAGTCCTaGTGGCAGCCGCCGTTATCC +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDVLTQS*WQPPLS
Trigger: GGATAACGGCGGCTGCCAGCAGGACTGCGTCAACAC...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGTGTTGACGCAGTCCTaGTGGCAGCCGCCGTTATCC +
Preference number: 4 (lower is better)
Translates to: ETQGWRWGPADIPSCHQAVLTQS*WQPPLS
Trigger: GGATAACGGCGGCTGCCAGCAGGACTGCGTCAACAC...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGGAGGACGAAGCCACTaGGGCATTGGCACTCATAAC +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQGGRSH*GIGTHN
Trigger: GTTATGAGTGCCAATGCCGCAGTGGCTTCGTCCTCC...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGGCTTCTTTGCAGTCGTaGTTGTTGTCATGGAGGACG +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRASLQS*LLSWRT
Trigger: CGTCCTCCATGACAACAAGCACGACTGCAAAGAAGC...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GPVRDELEPEAAGRALDVRSAGT*GCLWPG
Trigger: TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCT...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGCAGTGGTCACTTCCTaGTGTGGAGTGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHAVVTS*CGVCPG
Trigger: TCCAGGACACACTCCACAGCAGGAAGTGACCACTGC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSSSPRP*SGSGHF
Trigger: GAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGA...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGARGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 4 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCATGCACAGACACTTGTaGCCCAGGAAACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAMHRHL*PRKLGW
Trigger: CCACCCCAGTTTCCTGGGGCACAAGTGTCTGTGCAT...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGTTTATTGGCTGCGGTaGCCTGGTGTGGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: ETQGWRWGPADIPSCHQAVYWLR*PGVADR
Trigger: CCGGTCAGCCACACCAGGGCACCGCAGCCAATAAAC...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGCACTCGTCCTTGTCTaGAGGGGAGCAAATAAGGGC +
Preference number: 4 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRALVLV*RGANKG
Trigger: GCCCTTATTTGCTCCCCTGCAGACAAGGACGAGTGC...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp TTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGTCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LCRSPVPPPPMDSLTRPLSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...CAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACATCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGGGGCCACACACGCTCTaGTCGGGACGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: KGTWEGSTISRATAEKEQGPHTL*SGRRRP
Trigger: CGGGCGGCGACGTCCCGACCAGAGCGTGTGTGGCCC...CTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGATCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GAACAGGCCAAGGTCCTCCAAGAGGGAGTGAGCGGGAATAAGGGGCTCAGGGAACAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: EQAKVLQEGVSGNKGLREQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...TTCCCTGAGCCCCTTATTCCCGCTCACTCCCTCTTGGAGGACCTTGGCCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: PPDADFAGPVIVWVVGRLQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...CAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCACGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVARTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp GAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGATGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: ESTSSVRPEGGGPEWQSGCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...TCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCTACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR CCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR CCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTACTCGGAATTTGAGCTaGTGGGGGCGTCCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSTRNLS*WGRPRG
Trigger: CCCTCGGGGACGCCCCCACCAGCTCAAATTCCGAGT...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGCCTGGCAGGCCTCACTaGGGGGTCCGGTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGPGRPH*GVRFLF
Trigger: GAAAAGAAACCGGACCCCCCAGTGAGGCCTGCCAGG...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCACAGACACCATCAAAATaGGAGGGGGTAGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAQTPSK*EGVGHG
Trigger: CCCGTGCCCTACCCCCTCCCATTTTGATGGTGTCTG...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGTTGACGCAGTCCTGCTaGCAGCCGCCGTTATCCTTG +
Preference number: 4 (lower is better)
Translates to: FPHLLWTVSPGHWPCRSWLTQSC*QPPLSL
Trigger: CAAGGATAACGGCGGCTGCCAGCAGGACTGCGTCAA...CCAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTTGACGCAGTCCTGCTaGCAGCCGCCGTTATCCTTG +
Preference number: 4 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPLTQSC*QPPLSL
Trigger: CAAGGATAACGGCGGCTGCCAGCAGGACTGCGTCAA...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGCGGGGGTGCTGGAGATaGCCCACGTGCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PPDADFAGPVIVWVVGRLRGCWR*PTCTPS
Trigger: AGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCG...CAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGGTGCCCGGGGGTGCTaGAGATGGCCCACGTGCACT +
Preference number: 4 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRGARGC*RWPTCT
Trigger: AGTGCACGTGGGCCATCTCCAGCACCCCCGGGCACC...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGCGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACA +
Preference number: 4 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLRGRGP*RLARRT
Trigger: TGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCG...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAATCCACCTCAAAGGTCTaGAACACGAGCTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQSTSKV*NTSSTP
Trigger: CGGCGTGGAGCTCGTGTTCCAGACCTTTGAGGTGGA...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCCCCCTGCTCAGGCAGTaGTCACTTCCTGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WLMPESSSPTSYGQSHQAPLLRQ*SLPAVE
Trigger: CTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGG...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTaGCCCTGCAGGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTVSPGH*PCRSWG
Trigger: GCCCCAGGACCTGCAGGGCCAATGGCCTGGTGAGAC...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACCCCACGGTGGCTCCTaGGGGACATGCACAGACACT +
Preference number: 4 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGPHGGS*GTCTDT
Trigger: AGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGGG...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTGGGAGGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAACACTTTCGGTTTATTaGCTGCGGTGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VGGQATRGSKGALHPAGPTLSVY*LRCPGV
Trigger: CACACCAGGGCACCGCAGCCAATAAACCGAAAGTGT...TGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCCTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520970.5
CDS-3UTR CCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTCAGCCAAGGGGAGCCTaGGGAATGGGGAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLQPRGA*GMGRVS
Trigger: TGAGACCCTCCCCATTCCCCAGGCTCCCCTTGGCTG...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000483364.5
CDS-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGAGGCAGGGTGGCCTaGGTGTCCTCAGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGGGRVA*VSSGVG
Trigger: GCCCACCCCTGAGGACACCCAGGCCACCCTGCCTCC...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACCTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHLELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp CGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCACGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: REVQDDLLPGCDRDAPHARQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...TGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp AAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGCGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: KWLMPESSSPTSYGQSHQRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...CTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: TGWALVKLAGLGNVPLAEAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCGGCTGGACGTGCTCTTGATGTCATCAGGCTTCTCATAGCCACAGTAGCGCCCGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: AAGRALDVIRLLIATVAPAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...GGGCGCTACTGTGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAACTGCCGAACGTGTTaGCGCAGTCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDNCRTC*RSPAGS
Trigger: GCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGTT...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGAACTGCCGAACGTGTTaGCGCAGTCCTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVNCRTC*RSPAGS
Trigger: GCTGCCAGCAGGACTGCGTCAACACGTTCGGCAGTT...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACGCCAGTTGGGGCTGGTaGTGGTACCACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDASWGW*WYHWWM
Trigger: CATCCACCAGTGGTACCATCACCAGCCCCAACTGGC...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR TCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCTCCTCAGGAGGCCCTaGGCCACAGTAGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSLLRRP*ATVAPQ
Trigger: CTGGGGCGCTACTGTGGCTCAGGGCCTCCTGAGGAG...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TCAGGAAGTTATACTCCTGCCCTGAGGGTCCGGGGAGCAGCCAAGGGGAGCCTGGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SGSYTPALRVRGAAKGSLDLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...CAGGCTCCCCTTGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAACTTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR GCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRADLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCAGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVAGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGCAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KWLMPESSSPTSYGQSHQQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...CTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp AGGCCAGTTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: RPVGAGDGTTGGCHLVVTGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...TGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAACTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCATTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRALPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PGVADRPLGLREALSCFSLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: LVMVPLVDVTLWSQPASLTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCTCAAAGAAGTCAAACTaGAGGGAGATGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPSKKSN*REMRYW
Trigger: CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGA...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: WCVAFRPPPLSSLGDQGQPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...CTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCATGGAGATGGCCCACGTaGACTCCTTCTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAWRWPT*TPSCWD
Trigger: ATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCA...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCTGGAGATGGCCCACGTaGACTCCTTCTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PGGAGDGPRALLLAGILVWRWPT*TPSCWD
Trigger: ATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCA...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGTCAGCTTGACCCGGTaGCCGGGGGTGCTGGAGATG +
Preference number: 4 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRVSLTR*PGVLEM
Trigger: CATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGAC...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLRSAGT*GCLWPG
Trigger: TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCT...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGTCCAGTCCCCGCCCCTaGTCAGGCAGTGGTCACTTC +
Preference number: 4 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVSSPRP*SGSGHF
Trigger: GAAGTGACCACTGCCTGAGCAGGGGCGGGGACTGGA...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGTGGGGAAGTGGCTTATaGCGGAGTCCAGTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMWGSGL*RSPVPP
Trigger: TGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCA...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGTCTTGTGGAAGCTCTaGTCCCTGGCCCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLVLWKL*SLAPAP
Trigger: AGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGAC...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGATGCACAGACACTTGTaGCCCAGGAAACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAEMHRHL*PRKLGW
Trigger: CCACCCCAGTTTCCTGGGGCACAAGTGTCTGTGCAT...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGAGGCTCCTGGGGGACATaGACAGACACTTGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGGSWGT*TDTCAP
Trigger: TGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCC...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGTTTATTGGCTGCGGTaGCCTGGTGTGGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQVYWLR*PGVADR
Trigger: CCGGTCAGCCACACCAGGGCACCGCAGCCAATAAAC...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCATTAGCCTCGGAGTaGTGTCCCCAGCATCTCGGG +
Preference number: 4 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGPLASE*CPQHLG
Trigger: CCCGAGATGCTGGGGACAGCACTCCGAGGCTAATGG...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGACPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAACGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGTCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGGCCAGTTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACATCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: RPVGAGDGTTGGCHLVVTSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...TGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAACTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGATACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 4 (lower is better)
Translates to: ESTSSVRPEGGGPEWQSGYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...TCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCTACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: FPHLLWTVSPGHWPCRSWPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CCAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 4 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 4 (lower is better)
Translates to: SAGTCGCLWPGRARASCSRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: GRREHQFCPARGRWAGMAVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...TGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: WGEESTSSVRPEGGGPEWEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...CCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCTGGGACTCGATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GWDSMSISMKVSLTRCPGEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...CCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATCGAGTCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 4 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGCACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGACAGCGGCGCTTGTCTaGGGCCAGCTCGTACCCGGG +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWTAALV*GQLVPG
Trigger: CCCGGGTACGAGCTGGCCCCAGACAAGCGCCGCTGT...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTCCTGGCAGGCCTCACTaGGGGGTCCGGTTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPPGRPH*GVRFLF
Trigger: GAAAAGAAACCGGACCCCCCAGTGAGGCCTGCCAGG...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCCAGACACCATCAAAATaGGAGGGGGTAGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: GPVRDELEPEAAGRALDVQTPSK*EGVGHG
Trigger: CCCGTGCCCTACCCCCTCCCATTTTGATGGTGTCTG...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
CDS-3UTR CCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGTTGACGCAGTCCTGCTaGCAGCCGCCGTTATCCTTG +
Preference number: 4 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQLTQSC*QPPLSL
Trigger: CAAGGATAACGGCGGCTGCCAGCAGGACTGCGTCAA...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCTTGACGCAGTCCTGCTaGCAGCCGCCGTTATCCTTG +
Preference number: 4 (lower is better)
Translates to: GPVRDELEPEAAGRALDVLTQSC*QPPLSL
Trigger: CAAGGATAACGGCGGCTGCCAGCAGGACTGCGTCAA...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGAGTGGATGTCACCTTGTaGTCACAGCCGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRVDVTL*SQPASL
Trigger: CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCAC...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACACGGGGGTGCTGGAGATaGCCCACGTGCACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTRGCWR*PTCTPS
Trigger: AGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCG...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp TGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGACGTCTGCCCGTACCTaGCCCCCGCACTCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: CHQAGPPKRGMMTSKCLVTSART*PPHSVA
Trigger: CGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGT...CACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGGGGAGTAAAGGTCCTTaGTCTTCACGTCTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWGSKGP*SSRLPV
Trigger: TACGGGCAGACGTGAAGACCAAGGACCTTTACTCCC...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCGGGAGTAAAGGTCCTTaGTCTTCACGTCTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGGSKGP*SSRLPV
Trigger: TACGGGCAGACGTGAAGACCAAGGACCTTTACTCCC...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCATCCACCTCAAAGGTCTaGAACACGAGCTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: ETQGWRWGPADIPSCHQASTSKV*NTSSTP
Trigger: CGGCGTGGAGCTCGTGTTCCAGACCTTTGAGGTGGA...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGTCCACCTCAAAGGTCTaGAACACGAGCTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMSTSKV*NTSSTP
Trigger: CGGCGTGGAGCTCGTGTTCCAGACCTTTGAGGTGGA...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCATGGTGTCATCCGAGTaGAACTTCACCAGGACAGAA +
Preference number: 4 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPMVSSE*NFTRTE
Trigger: TTCTGTCCTGGTGAAGTTCCACTCGGATGACACCAT...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp ACAATACAGCGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCGTCTCACCAGGCCATTaGCCCTGCAGGTCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TIQRVETQGWRWGPADIPVSPGH*PCRSWG
Trigger: GCCCCAGGACCTGCAGGGCCAATGGCCTGGTGAGAC...GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACGCTGGTGGGGGTTTGTaGGGAAGTGGCTTATGCCGG +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHAGGGL*GSGLCR
Trigger: CCGGCATAAGCCACTTCCCCACAAACCCCCACCAGC...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACCTTCGAAATGTCTTGTaGAAGCTCTGCTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHLRNVL*KLCSLA
Trigger: GGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAG...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCAGGAAACTGGGGTaGTGGAATGGGGGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGPRKLG*WNGGSK
Trigger: TTTTGAGCCCCCATTCCACCACCCCAGTTTCCTGGG...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CACCGAAGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTGTGCCCCAGGAAACTaGGGTGGTGGAATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HRSPHPIPSKVRFLSNKGCAPGN*GGGMGA
Trigger: AGCCCCCATTCCACCACCCCAGTTTCCTGGGGCACA...CCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCTTCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTACACTTTCGGTTTATTaGCTGCGGTGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SRSAGTCGCLWPGRARASTLSVY*LRCPGV
Trigger: CACACCAGGGCACCGCAGCCAATAAACCGAAAGTGT...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520970.5
CDS-3UTR CCA 90 bp TGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAAGGGAAGCGGCGCACTaGAGGCCAGGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: WVVGRLNVAIVLFHITPAREAAH*RPGEGV
Trigger: GACGCCCTCCCCTGGCCTCCAGTGCGCCGCTTCCCT...TGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGAAGTTATACTCCTGCCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCCGTAGGAGCAGCACCTaGAGGGCGGGGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSYTPALAGCSHERWKRGRRSST*RAGPAQ
Trigger: CTGAGCTGGCCCCGCCCTCCAGGTGCTGCTCCTACG...GCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGAGGGGGCTGCAGAGCTaGCCTCTTTTCCTACAGTGC +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQRGLQS*PLFLQC
Trigger: GCACTGTAGGAAAAGAGGCCAGCTCTGCAGCCCCCT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCCCGAGCGGACCAGCATaGGTCACCATTACCTGCTTA +
Preference number: 4 (lower is better)
Translates to: PGVADRPLGLREALSCFSPSGPA*VTITCL
Trigger: TAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGG...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTAAGTGGAGGCCTGGCTaGACTTTCTCCCACCGGGAC +
Preference number: 4 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLKWRPG*TFSHRD
Trigger: GTCCCGGTGGGAGAAAGTCCAGCCAGGCCTCCACTT...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR CCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAAGTGGAGGCCTGGCTaGACTTTCTCCCACCGGGAC +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDKWRPG*TFSHRD
Trigger: GTCCCGGTGGGAGAAAGTCCAGCCAGGCCTCCACTT...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR CAA 72 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LSTGWALVKLAG*GNVPLAEPCPL
Trigger: CAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CACCGAAGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGAGGGGTCTTTGTAGTTaGGGGGCTCCGAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: HRSPHPIPSKVRFLSNKGRGLCS*GAPSRP
Trigger: AGGACGACTCGGAGCCCCTCAACTACAAAGACCCCT...CCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCTTCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGAAGGGGTCTTTGTAGTTaGGGGGCTCCGAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGRGLCS*GAPSRP
Trigger: AGGACGACTCGGAGCCCCTCAACTACAAAGACCCCT...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCAGGGGTCTTTGTAGTTaGGGGGCTCCGAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGARGLCS*GAPSRP
Trigger: AGGACGACTCGGAGCCCCTCAACTACAAAGACCCCT...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGATCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCACAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVAQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR TCA 90 bp GCGGCTGGACGTGCTCTTGATGTCATCAGGCTTCTCATAGCCACAGTAGCGCCCCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: AAGRALDVIRLLIATVAPQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...GGGCGCTACTGTGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PGVADRPLGLREALSCFSGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAAGAAGAAGTGGGCCTTaGAGCCCTTTTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRARRSGP*SPFWTR
Trigger: CCGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCT...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGAGAAGAAGTGGGCCTTaGAGCCCTTTTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPRRSGP*SPFWTR
Trigger: CCGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCT...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGAGAAGAAGTGGGCCTTaGAGCCCTTTTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGRRSGP*SPFWTR
Trigger: CCGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCT...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAAGCTGGCCTCTTTTCTaGGAAGAAGTGGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRSWPLF*EEVGLE
Trigger: TTCAAGGCCCACTTCTTCTCAGAAAAGAGGCCAGCT...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp TTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCAGTTGGGGCTGGTaGTGGTACCACTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LCRSPVPPPPMDSLTRPLASWGW*WYHWWM
Trigger: CATCCACCAGTGGTACCATCACCAGCCCCAACTGGC...CAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR TCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATCTTCCTCGGCCACAATaGCCCACTCACAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHLPRPQ*PTHSPH
Trigger: GTGTGGACTGTGAGTGGGTCATTGTGGCCGAGGAAG...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGTGCCCTGGTGTGGCTaGCCGGCCACTGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PPKRGMMTSKCLVEALLPVPWCG*PATGPE
Trigger: CTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCAC...AGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTGGCAGGGGTCAGACTaGAGGTCTTCAGGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQWQGSD*RSSGSF
Trigger: GAAAGAGCCTGAAGACCTTCAGTCTGACCCCTGCCA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQDLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CACCGAAGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HRSPHPIPSKVRFLSNKGQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...CCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCTTCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCATTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 4 (lower is better)
Translates to: GRREHQFCPARGRWAGMAFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...TGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GACGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: DVKFRMIFSPGVTEMRHTPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...CGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGTGTTGACGCAGTCCTaGTGGCAGCCGCCGTTATCC +
Preference number: 4 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLVLTQS*WQPPLS
Trigger: GGATAACGGCGGCTGCCAGCAGGACTGCGTCAACAC...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACGCTTCTTTGCAGTCGTaGTTGTTGTCATGGAGGACG +
Preference number: 4 (lower is better)
Translates to: ISMKVSLTRCPGVLEMAHASLQS*LLSWRT
Trigger: CGTCCTCCATGACAACAAGCACGACTGCAAAGAAGC...GTGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACACAGCCGGCTTCTTTaGAGTCGTGCTTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPHSRLL*SRACCH
Trigger: ATGACAACAAGCACGACTGCAAAGAAGCCGGCTGTG...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCACAGCCGGCTTCTTTaGAGTCGTGCTTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRHSRLL*SRACCH
Trigger: ATGACAACAAGCACGACTGCAAAGAAGCCGGCTGTG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAGAAGCGCAGGAACATaGGGCTGCCTGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSRSAGT*GCLWPG
Trigger: TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCT...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGTGTCCTGGAACTTGGTaGTGGTGTATCGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGCPGTW*WCIAGG
Trigger: TCCACCTGCGATACACCAGCACCAAGTTCCAGGACA...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATTGTCCTGGAACTTGGTaGTGGTGTATCGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNCPGTW*WCIAGG
Trigger: TCCACCTGCGATACACCAGCACCAAGTTCCAGGACA...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGTTTATTGGCTGCGGTaGCCTGGTGTGGCTGACCGG +
Preference number: 4 (lower is better)
Translates to: LCRSPVPPPPMDSLTRPLVYWLR*PGVADR
Trigger: CCGGTCAGCCACACCAGGGCACCGCAGCCAATAAAC...CAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCTTTCGGTTTATTGGCTaGGGTGCCCTGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGFRFIG*GALVWL
Trigger: CAGCCACACCAGGGCACCGCAGCCAATAAACCGAAA...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGGTCCAAAGGGGCACTaGATCCAGCAGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTGPKGH*IQQDQL
Trigger: CAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACC...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGCAGACGCTGGGTCTGTaGAGGGCTGAGGTTGGGATG +
Preference number: 4 (lower is better)
Translates to: LCRSPVPPPPMDSLTRPLQTLGL*RAEVGM
Trigger: CATCCCAACCTCAGCCCTGCACAGACCCAGCGTCTG...CAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCGCACTCGTCCTTGTCTaGAGGGGAGCAAATAAGGGC +
Preference number: 4 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGALVLV*RGANKG
Trigger: GCCCTTATTTGCTCCCCTGCAGACAAGGACGAGTGC...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTTAATGGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: VNGPVRDELEPEAAGRALCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...AAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCCATTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TTGGAGCACTCGTCCTTGTCTGCAGGGGAGCAAATAAGGGCAGACGCTGGGTCTTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LEHSSLSAGEQIRADAGSCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...AGACCCAGCGTCTGCCCTTATTTGCTCCCCTGCAGACAAGGACGAGTGCTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGCTCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: YHWWMSPCGHSRLLCSRAQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...AGCACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GAGAACGCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: ENAWLDVLTNDGNVAVPVCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...GACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGCGTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 4 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGTTATACTCCTGCCCTaGCTGGATGTTCTCACGAAC +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRVILLP*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAAC...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGGCCTGGCTGGACTTTCTCCCACCGGGACAGAGCAACAGCTGGCAGAGCTGGGTTATACTCCTGCCCTaGCTGGATGTTCTCACGAAC +
Preference number: 4 (lower is better)
Translates to: EAWLDFLPPGQSNSWQSWVILLP*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAAC...CCAGCTCTGCCAGCTGTTGCTCTGTCCCGGTGGGAGAAAGTCCAGCCAGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp GAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGACATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 4 (lower is better)
Translates to: ESTSSVRPEGGGPEWQSGHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...TCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGACATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 4 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: VPPPPMDSLTRPLALQVLVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...CAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp TGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: WGEESTSSVRPEGGGPEWSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...CCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGATCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: AAVSGDDRLREFGPAEAASISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACCACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACTTGACGCAGTCCTGCTaGCAGCCGCCGTTATCCTTG +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHLTQSC*QPPLSL
Trigger: CAAGGATAACGGCGGCTGCCAGCAGGACTGCGTCAA...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACAATACAGCGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCCCGCACTCTGTGGCGTaGGAGGCCTGGAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: TIQRVETQGWRWGPADIPPHSVA*EAWKPF
Trigger: AAAGGGCTTCCAGGCCTCCCACGCCACAGAGTGCGG...GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTTCCACCTCAAAGGTCTaGAACACGAGCTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: CSHERWKRGGPGLAECVRSTSKV*NTSSTP
Trigger: CGGCGTGGAGCTCGTGTTCCAGACCTTTGAGGTGGA...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCACCTGGAACTTGGTGCTaGTGTATCGCAGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAPGTWC*CIAGGN
Trigger: GTTTCCACCTGCGATACACCAGCACCAAGTTCCAGG...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGCCTGGAACTTGGTGCTaGTGTATCGCAGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAEPGTWC*CIAGGN
Trigger: GTTTCCACCTGCGATACACCAGCACCAAGTTCCAGG...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGCCTGGAACTTGGTGCTaGTGTATCGCAGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: FPHLLWTVSPGHWPCRSWPGTWC*CIAGGN
Trigger: GTTTCCACCTGCGATACACCAGCACCAAGTTCCAGG...CCAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGGTCACTTCCTGCTGTaGAGTGTGTCCTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAGHFLL*SVSWNL
Trigger: CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACC...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGTCACTTCCTGCTGTaGAGTGTGTCCTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQGHFLL*SVSWNL
Trigger: CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACC...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCTTCGAAATGTCTTGTaGAAGCTCTGCTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPLRNVL*KLCSLA
Trigger: GGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAG...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGACACAGGGATGGCGATaGGGTCCTGCTGACATTCCC +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQTQGWR*GPADIP
Trigger: GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACGTAGAGACACAGGGATaGCGATGGGGTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDVETQG*RWGPAD
Trigger: GTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTAGGGAAGCGGCGCACTaGAGGCCAGGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGREAAH*RPGEGV
Trigger: GACGCCCTCCCCTGGCCTCCAGTGCGCCGCTTCCCT...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACCGTAGGAGCAGCACCTaGAGGGCGGGGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDRRSST*RAGPAQ
Trigger: CTGAGCTGGCCCCGCCCTCCAGGTGCTGCTCCTACG...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520626.6
CDS-3UTR TCA 90 bp CGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: REVQDDLLPGCDRDAPHAELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...TGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATCTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDLELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQLELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAACGCAAGGTCGATAGGTaGACACAATATAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKRKVDR*TQYSCP
Trigger: AGGACAGCTATATTGTGTTCACCTATCGACCTTGCG...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGCGCAAGGTCGATAGGTaGACACAATATAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWRKVDR*TQYSCP
Trigger: AGGACAGCTATATTGTGTTCACCTATCGACCTTGCG...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACCGCAAGGTCGATAGGTaGACACAATATAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNRKVDR*TQYSCP
Trigger: AGGACAGCTATATTGTGTTCACCTATCGACCTTGCG...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAATCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LCRSPVPPPPMDSLTRPLQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...CAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp AGGCCAGTTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACACAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: RPVGAGDGTTGGCHLVVTQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...TGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAACTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp TGGCCAATGGGAGGTTTCACCCCGTTCACCTCATACTTGGGGACAATGGTATCCCGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: WPMGGFTPFTSYLGTMVSRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...GGATACCATTGTCCCCAAGTATGAGGTGAACGGGGTGAAACCTCCCATTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGAAGAAGTGGGCCTTaGAGCCCTTTTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGRRSGP*SPFWTR
Trigger: CCGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCT...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGAGAAGAAGTGGGCCTTaGAGCCCTTTTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQRRSGP*SPFWTR
Trigger: CCGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGAGCTGGCCTCTTTTCTaGGAAGAAGTGGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAESWPLF*EEVGLE
Trigger: TTCAAGGCCCACTTCTTCTCAGAAAAGAGGCCAGCT...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCGCACTCGTCCTTGTCTaGGAAGAAGTGGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGALVLV*EEVGLE
Trigger: TTCAAGGCCCACTTCTTCTCAGACAAGGACGAGTGC...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306385.10
ENST00000354870.5
CDS-3UTR TCA 90 bp AAAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGCTCCTCAGGAGGCCCTaGGCCACAGTAGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KGAGRRGPSFTSQQEMSQLLRRP*ATVAPQ
Trigger: CTGGGGCGCTACTGTGGCTCAGGGCCTCCTGAGGAG...CTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGCCATGGGGAAGGGCTaGGATGTGGGCTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGAMGKG*DVGWDA
Trigger: TGCATCCCAGCCCACATCTCAGCCCTTCCCCATGGC...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGCTGAGATCCACAGCCTaGTGTACCTGGAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSLRSTA*CTWKAL
Trigger: GAGGGCCTTCCAGGTACAGCAGGCTGTGGATCTCAG...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCAGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVADLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PPDADFAGPVIVWVVGRLDLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...CAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: APVLSGQREVGRNGRVEVSVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPSVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCAGAGGGCCTGGTGAATGGAGGACTCAAGGGAACATGGGAAGGAAGCACCATTGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: AEGLVNGGLKGTWEGSTIGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...AATGGTGCTTCCTTCCCATGTTCCCTTGAGTCCTCCATTCACCAGGCCCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR GCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGALPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 4 (lower is better)
Translates to: PGGAGDGPRALLLAGILVFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGTCCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: SPRPCSGSGHFLLWSVSWPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...CCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGAGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 4 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 4 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GACGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: DVKFRMIFSPGVTEMRHTVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...CGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGTCAAAGAAGTCAAACTaGAGGGAGATGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: WGEESTSSVRPEGGGPEWSKKSN*REMRYW
Trigger: CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGA...CCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGATCAAAGAAGTCAAACTaGAGGGAGATGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRSKKSN*REMRYW
Trigger: CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGA...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp TTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FPHLLWTVSPGHWPCRSWQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...CCAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTTGGACCCGCAGAAGCGGCCGTCCGGTTTCTTTTCTaGACTCGGAATTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AAVSGDDRLREFGPAEAAVRFLF*TRNLSW
Trigger: CCAGCTCAAATTCCGAGTGCAGAAAAGAAACCGGAC...GGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR GCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACGGAGGACGAAGCCACTaGGGCATTGGCACTCATAAC +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHGGRSH*GIGTHN
Trigger: GTTATGAGTGCCAATGCCGCAGTGGCTTCGTCCTCC...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTTGGAGCACTCGTCCTTGTCTGCAGGGGAGCAAATAAGGGCAGACGCTGGGTCGGAGGACGAAGCCACTaGGGCATTGGCACTCATAAC +
Preference number: 4 (lower is better)
Translates to: LGALVLVCRGANKGRRWVGGRSH*GIGTHN
Trigger: GTTATGAGTGCCAATGCCGCAGTGGCTTCGTCCTCC...GACCCAGCGTCTGCCCTTATTTGCTCCCCTGCAGACAAGGACGAGTGCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGATGGAGATGGCCCACGTaGACTCCTTCTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGWRWPT*TPSCWD
Trigger: ATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCA...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGAAGTTATACTCCTGCCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCCTTGGTCTTCACGTCTaGCCGTACCTGGCCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GSYTPALAGCSHERWKRGLGLHV*PYLAPA
Trigger: TGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAG...GCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGTGTCCTGGAACTTGGTaGTGGTGTATCGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLCPGTW*WCIAGG
Trigger: TCCACCTGCGATACACCAGCACCAAGTTCCAGGACA...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCCTCTTTTCCTACAGTaGCCAAATGCCCCGGAAGGT +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQPLFLQ*PNAPEG
Trigger: ACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACGGGCTGAGGTTGGGATaGCCCAGGGGAAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EQDAGVPLLLHNRKCHRHGLRLG*PRGSGG
Trigger: GCCTCCACTTCCCCTGGGGCATCCCAACCTCAGCCC...GTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTGACAGCCTGCTGTACCTaGAAGGCCCTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVKLAGLGNVPLAEPCPLTACCT*KALRSS
Trigger: AGAGGACCTGAGGGCCTTCCAGGTACAGCAGGCTGT...CAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTGGTAGAAGTGTTTCCTaGAACTGCAGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: LSRSAGTCGCLWPGRARAGRSVS*NCSFDG
Trigger: TCCATCAAAGCTGCAGTTCCAGGAAACACTTCTACC...AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GTGGGAGGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGGTAGAAGTGTTTCCTaGAACTGCAGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: VGGQATRGSKGALHPAGPGRSVS*NCSFDG
Trigger: TCCATCAAAGCTGCAGTTCCAGGAAACACTTCTACC...TGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCCTCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGTCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCTCTTGCCGATGGAGATaGCCTGGGGGCCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITSCRWR*PGGPRR
Trigger: GCGGCGGGGGCCCCCAGGCCATCTCCATCGGCAAGA...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVACSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGTACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 4 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGGTTATACTCCTGCCCTaGCTGGATGTTCTCACGAAC +
Preference number: 4 (lower is better)
Translates to: RREHQFCPARGRWAGMAEVILLP*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAAC...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGTTATACTCCTGCCCTaGCTGGATGTTCTCACGAAC +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNVILLP*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAAC...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCACATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 4 (lower is better)
Translates to: MVRCLPPTPTIQSRRPRAHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...TGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 4 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp GGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: GSGLCRSPVPPPPMDSLTLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...GGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGREQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCAAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPNRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 4 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 4 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp GTTAATGGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: VNGPVRDELEPEAAGRALNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...AAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCCATTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: PGVADRPLGLREALSCFSSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTCACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCTCGTGCTTGTTGTCATaGAGGACGAAGCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGASCLLS*RTKPLR
Trigger: CCGCAGTGGCTTCGTCCTCCATGACAACAAGCACGA...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATGTGGATGTCACCTTGTaGTCACAGCCGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDVDVTL*SQPASL
Trigger: CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCAC...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CATCTCCATGAAGGTCTTCTTTGCAGTCGTGCTTGTTGTCATGGAGGACGAAGCACATGCGGCTGCCTGTaGCCAGGACGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: HLHEGLLCSRACCHGGRSTCGCL*PGRARA
Trigger: AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGT...GCTTCGTCCTCCATGACAACAAGCACGACTGCAAAGAAGACCTTCATGGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520970.5
CDS-3UTR CCA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGGAGTAAAGGTCCTTaGTCTTCACGTCTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDGSKGP*SSRLPV
Trigger: TACGGGCAGACGTGAAGACCAAGGACCTTTACTCCC...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATCCTGGAACTTGGTGCTaGTGTATCGCAGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDPGTWC*CIAGGN
Trigger: GTTTCCACCTGCGATACACCAGCACCAAGTTCCAGG...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGCCCCTGCTCAGGCAGTaGTCACTTCCTGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLPLLRQ*SLPAVE
Trigger: CTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGG...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCGGGTTTGTGGGGAAGTaGCTTATGCCGGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GSGLCRSPVPPPPMDSLTGFVGK*LMPESS
Trigger: ACTGGACTCCGGCATAAGCCACTTCCCCACAAACCC...GGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGACACAGGGATGGCGATaGGGTCCTGCTGACATTCCC +
Preference number: 4 (lower is better)
Translates to: KWLMPESSSPTSYGQSHQTQGWR*GPADIP
Trigger: GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT...CTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAACACTTTCGGTTTATTaGCTGCGGTGCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: ETQGWRWGPADIPSCHQATLSVY*LRCPGV
Trigger: CACACCAGGGCACCGCAGCCAATAAACCGAAAGTGT...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGAACGCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCAGAGGGCCTGGTGAATaGAGGACTCAAGGGAACATG +
Preference number: 4 (lower is better)
Translates to: ENAWLDVLTNDGNVAVPVRGPGE*RTQGNM
Trigger: CATGTTCCCTTGAGTCCTCCATTCACCAGGCCCTCT...GACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGCGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp AAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGTGAAGAGTGGAGACGTAGGAGCAGCACCTaGAGGGCGGGGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KEAPFLEPQLRRSSEEWRRRSST*RAGPAQ
Trigger: CTGAGCTGGCCCCGCCCTCCAGGTGCTGCTCCTACG...TCTCCACTCTTCACTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518656.5
3UTR CAA 72 bp GGCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCACCCCGTTCACCTCATA +
Preference number: 4 (lower is better)
Translates to: GLGNVPLAEPCP*ANGRFHPVHLI
Trigger: TATGAGGTGAACGGGGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp AGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCAGGGGTCTTTGTAGTTaGGGGGCTCCGAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: RNDDFEMSCGSSAPWPQPRGLCS*GAPSRP
Trigger: AGGACGACTCGGAGCCCCTCAACTACAAAGACCCCT...GGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTCTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: CSHERWKRGGPGLAECVRLELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518656.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCGCAAGGTCGATAGGTaGACACAATATAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGRKVDR*TQYSCP
Trigger: AGGACAGCTATATTGTGTTCACCTATCGACCTTGCG...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCCGCAAGGTCGATAGGTaGACACAATATAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGVADRPLGLREALSCFSRKVDR*TQYSCP
Trigger: AGGACAGCTATATTGTGTTCACCTATCGACCTTGCG...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: WLMPESSSPTSYGQSHQASERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TGWALVKLAGLGNVPLAEGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGCGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATAGAAGAAGTGGGCCTTaGAGCCCTTTTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHRRSGP*SPFWTR
Trigger: CCGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCT...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTAGAAGAAGTGGGCCTTaGAGCCCTTTTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSRRSGP*SPFWTR
Trigger: CCGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCT...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR TCA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR TCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGCGATGGGGTCCTGCTaGCATTCCCTCTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGAMGSC*HSLLPP
Trigger: TGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGC...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR TCA 90 bp TGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGTTATACTCCTGCCCTaGGGGTCCGGGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WVVGRLNVAIVLFHITPAVILLP*GSGEQP
Trigger: TGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAAC...TGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000483364.5
CDS-3UTR TCA 90 bp AAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGGTTATACTCCTGCCCTaGGGGTCCGGGGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KGTWEGSTISRATAEKEQVILLP*GSGEQP
Trigger: TGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAAC...CTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR GCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGSVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCAAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPSVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: VGRLNVAIVLFHITPADGGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGCCTGGTGAATGGAGGACTCAAGGGAACATGGGAAGGAAGCACCATTTCTAGACAGTGCCTCATGGCCTaGCGGAAGACTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GLVNGGLKGTWEGSTISRQCLMA*RKTALW
Trigger: CCAGAGGGCAGTCTTCCGGCAGGCCATGAGGCACTG...TCTAGAAATGGTGCTTCCTTCCCATGTTCCCTTGAGTCCTCCATTCACCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR GCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTGTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LVKLAGLGNVPLAEPCPLLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...CAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AAAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACCAGCACAGGCGGCTaGGGTACAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: KGAGRRGPSFTSQQEMSQTSTGG*GTGPGT
Trigger: CGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGT...CTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTTCTCATAGCCACAGTAGCGCCCGATGAGGGTGCTGCTCTCACTGTGCCCGTCCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: LLIATVAPDEGAALTVPVQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...GACGGGCACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTGGCTATGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 4 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PGVADRPLGLREALSCFSDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VPPPPMDSLTRPLALQVLDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...CAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGTCAAAGAAGTCAAACTaGAGGGAGATGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGSKKSN*REMRYW
Trigger: CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGA...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGTCAAAGAAGTCAAACTaGAGGGAGATGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: VPPPPMDSLTRPLALQVLSKKSN*REMRYW
Trigger: CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGA...CAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp AGAGGAGGATGGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTGCTTACTCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: RGGWGSERTSMGHHYLLTPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...AGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCCATCCTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCCACAGCCGGCTTCTTTaGAGTCGTGCTTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: WLMPESSSPTSYGQSHQAHSRLL*SRACCH
Trigger: ATGACAACAAGCACGACTGCAAAGAAGCCGGCTGTG...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGGCAGTGGTCACTTCCTaGTGTGGAGTGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSAVVTS*CGVCPG
Trigger: TCCAGGACACACTCCACAGCAGGAAGTGACCACTGC...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 4 (lower is better)
Translates to: WVVGRLNVAIVLFHITPARGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...TGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGAGAGGGATGGTGCGTTaGCTTCCGCCCACCCCCACT +
Preference number: 4 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGRGMVR*LPPTPT
Trigger: AGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCT...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGGCCAGTTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAATGCACAGACACTTGTaGCCCAGGAAACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RPVGAGDGTTGGCHLVVTMHRHL*PRKLGW
Trigger: CCACCCCAGTTTCCTGGGGCACAAGTGTCTGTGCAT...TGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAACTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTGGCTCCTGGGGGACATaGACAGACACTTGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSGSWGT*TDTCAP
Trigger: TGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCC...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGTGGGTCACCATTACCTaGTTACTGGACAGATGGACA +
Preference number: 4 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGWVTIT*LLDRWT
Trigger: TGTCCATCTGTCCAGTAAGCAGGTAATGGTGACCCA...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTACAGCCTGCTGTACCTaGAAGGCCCTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRTACCT*KALRSS
Trigger: AGAGGACCTGAGGGCCTTCCAGGTACAGCAGGCTGT...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGGGTAGAAGTGTTTCCTaGAACTGCAGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: WGEESTSSVRPEGGGPEWGRSVS*NCSFDG
Trigger: TCCATCAAAGCTGCAGTTCCAGGAAACACTTCTACC...CCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGCGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACTCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGTCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: KGTWEGSTISRATAEKEQSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...CTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp AAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: KGTWEGSTISRATAEKEQQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...CTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp AAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: KGTWEGSTISRATAEKEQRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...CTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp GAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCGAACGATGGAAACGTaGCGGTCCCGGTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: EQDAGVPLLLHNRKCHRHRTMET*RSRSGR
Trigger: TCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCG...GTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGTTATACTCCTGCCCTaGCTGGATGTTCTCACGAAC +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRVILLP*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAAC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp AGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 4 (lower is better)
Translates to: SGEKRAPVLSGQREVGRNRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...ATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 4 (lower is better)
Translates to: VPPPPMDSLTRPLALQVLRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...CAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GACGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: DVKFRMIFSPGVTEMRHTGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...CGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TGWALVKLAGLGNVPLAEEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp CTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LSTGWALVKLAGLGNVPLRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...AAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CSHERWKRGGPGLAECVRRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAAAAGTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: CSQPPRLGREHSSTSLKKSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...CTTTTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCTTTTCTGAGAAGAAGTaGGCCTTGAAGCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGFSEKK*ALKPFL
Trigger: CAAAAAGGGCTTCAAGGCCCACTTCTTCTCAGAAAA...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAACCGGCCAGAGGGAGGTaGGCCGGAATGGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQPARGR*AGMAEW
Trigger: CCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGG...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGTCGTGCTTGTTGTCATaGAGGACGAAGCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSSCLLS*RTKPLR
Trigger: CCGCAGTGGCTTCGTCCTCCATGACAACAAGCACGA...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACGTGGATGTCACCTTGTaGTCACAGCCGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHVDVTL*SQPASL
Trigger: CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCAC...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp GCGGCTGGACGTGCTCTTGATGTCATCAGGCTTCTCATAGCCACAGTAGCGCCCGGGAGTAAAGGTCCTTaGTCTTCACGTCTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: AAGRALDVIRLLIATVAPGSKGP*SSRLPV
Trigger: TACGGGCAGACGTGAAGACCAAGGACCTTTACTCCC...GGGCGCTACTGTGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCCTGGAACTTGGTGCTaGTGTATCGCAGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAPGTWC*CIAGGN
Trigger: GTTTCCACCTGCGATACACCAGCACCAAGTTCCAGG...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTGGTCACTTCCTGCTGTaGAGTGTGTCCTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPGHFLL*SVSWNL
Trigger: CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACC...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATGGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTGCTTACTGGACAGATTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: MGVRADQHGSPLPAYWTDFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...ATCTGTCCAGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGTAGAGACACAGGGATaGCGATGGGGTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRVETQG*RWGPAD
Trigger: GTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTTGTGCCCCAGGAAACTaGGGTGGTGGAATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSCAPGN*GGGMGA
Trigger: AGCCCCCATTCCACCACCCCAGTTTCCTGGGGCACA...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGATCGGCTCCCCACGGTaGCTCCTGGGGGACATGCAC +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRIGSPR*LLGDMH
Trigger: GTGCATGTCCCCCAGGAGCCACCGTGGGGAGCCGAT...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGAGGGAAGCGGCGCACTaGAGGCCAGGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMREAAH*RPGEGV
Trigger: GACGCCCTCCCCTGGCCTCCAGTGCGCCGCTTCCCT...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACTGGAGAACGCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDWRTPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGCGTTCTCCA...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354870.5
CDS-3UTR CCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCTGGAGAACGCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 4 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVWRTPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGCGTTCTCCA...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000483364.5
CDS-3UTR CCA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAAGAGTGGAGAACGCCTaGCTGGATGTTCTCACGAAC +
Preference number: 4 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQRVENA*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGCGTTCTCCACTCT...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000483364.5
CDS-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACAGAGGGCCTGGTGAATaGAGGACTCAAGGGAACATG +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHRGPGE*RTQGNM
Trigger: CATGTTCCCTTGAGTCCTCCATTCACCAGGCCCTCT...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354870.5
CDS-3UTR CCA 90 bp GCGGCTGGACGTGCTCTTGATGTCATCAGGCTTCTCATAGCCACAGTAGCGCCCAGAGGGCCTGGTGAATaGAGGACTCAAGGGAACATG +
Preference number: 4 (lower is better)
Translates to: AAGRALDVIRLLIATVAPRGPGE*RTQGNM
Trigger: CATGTTCCCTTGAGTCCTCCATTCACCAGGCCCTCT...GGGCGCTACTGTGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000483364.5
CDS-3UTR CCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGTGTGTCTGGTCCCTCTaGGGCGGACGGGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWCVWSL*GGREEA
Trigger: TGCCTCCTCCCGTCCGCCCCAGAGGGACCAGACACA...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTTCAGGGACCTGTGTCTaGTCCCTCTGGGGCGGACGG +
Preference number: 4 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGSGTCV*SLWGGR
Trigger: CCGTCCGCCCCAGAGGGACCAGACACAGGTCCCTGA...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTTAGGGTCTCCTCGGTaGGTGTCCCAAAAGTCCAAA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQLGSPR*VSQKSK
Trigger: TTTGGACTTTTGGGACACCCACCGAGGAGACCCTAA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCTTTCTTCTCCTTCTTaGCTTAGGGTCTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRLSSPS*LRVSSV
Trigger: CACCGAGGAGACCCTAAGCCAAGAAGGAGAAGAAAG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCTGCTTACTGGACAGATaGACAAGTGGAAAAATAGAC +
Preference number: 4 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPCLLDR*TSGKID
Trigger: GTCTATTTTTCCACTTGTCCATCTGTCCAGTAAGCA...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR CAA 72 bp ACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGCTaGTTGTCATGGAGGACGAAGCCACTGCGGCATTGG +
Preference number: 4 (lower is better)
Translates to: TLWSQPASLQSC*LSWRTKPLRHW
Trigger: CCAATGCCGCAGTGGCTTCGTCCTCCATGACAACAAGCACGACTGCAAAGAAGCCGGCTGTGACCACAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCGCAAGGTCGATAGGTaGACACAATATAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQRKVDR*TQYSCP
Trigger: AGGACAGCTATATTGTGTTCACCTATCGACCTTGCG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR TCA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: VGRLNVAIVLFHITPADGQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAACACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp AAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KWLMPESSSPTSYGQSHQGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...CTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp AAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACGTCAGAGACGAACTTaGGCCAGAGGCGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: KEQDAGVPLLLHNRKCHRRQRRT*ARGGWT
Trigger: CGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACG...TCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATAGCTGGCCTCTTTTCTaGGAAGAAGTGGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHSWPLF*EEVGLE
Trigger: TTCAAGGCCCACTTCTTCTCAGAAAAGAGGCCAGCT...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR TCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR TCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTCTGCACTCGGAATTTaGGCTGGTGGGGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRSALGI*AGGGVP
Trigger: GGGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGA...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR TCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGCTTCCTCGGCCACAATaGCCCACTCACAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWLPRPQ*PTHSPH
Trigger: GTGTGGACTGTGAGTGGGTCATTGTGGCCGAGGAAG...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGCTCCTCAGGAGGCCCTaGGCCACAGTAGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMLLRRP*ATVAPQ
Trigger: CTGGGGCGCTACTGTGGCTCAGGGCCTCCTGAGGAG...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAACTCCTCAGGAGGCCCTaGGCCACAGTAGCGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKLLRRP*ATVAPQ
Trigger: CTGGGGCGCTACTGTGGCTCAGGGCCTCCTGAGGAG...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTCCTCCAAGAGGGAGTaGGCGGGAATAAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGSSKRE*AGIRGS
Trigger: TGAGCCCCTTATTCCCGCTCACTCCCTCTTGGAGGA...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR TCA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACCGATGTCCATCTCCATaGAGGTCTTCTTTGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDRCPSP*RSSLQS
Trigger: CGACTGCAAAGAAGACCTTCATGGAGATGGACATCG...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520970.5
CDS-3UTR GCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGCTGAGATCCACAGCCTaGTGTACCTGGAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWLRSTA*CTWKAL
Trigger: GAGGGCCTTCCAGGTACAGCAGGCTGTGGATCTCAG...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCCTGAGATCCACAGCCTaGTGTACCTGGAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: VGRLNVAIVLFHITPADGLRSTA*CTWKAL
Trigger: GAGGGCCTTCCAGGTACAGCAGGCTGTGGATCTCAG...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ACAATACAGCGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: TIQRVETQGWRWGPADIPDLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: FPHLLWTVSPGHWPCRSWSVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...CCAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GSGLCRSPVPPPPMDSLTWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...GGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: TGWALVKLAGLGNVPLAEWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CTTGGAGCACTCGTCCTTGTCTGCAGGGGAGCAAATAAGGGCAGACGCTGGGTCCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: LGALVLVCRGANKGRRWVQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...GACCCAGCGTCTGCCCTTATTTGCTCCCCTGCAGACAAGGACGAGTGCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 4 (lower is better)
Translates to: PPDADFAGPVIVWVVGRLFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...CAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 4 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: SRTQGSLFYFTTGNVTDTPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...GGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTAGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGAGTGCTGCTCTCACTGTaGCCGTCGCGCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KEQDAGVPLLLHNRKCHRVLLSL*PSRTSR
Trigger: TCTGGAGGTGCGCGACGGGCACAGTGAGAGCAGCAC...TCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCTCAAAGAAGTCAAACTaGAGGGAGATGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPSKKSN*REMRYW
Trigger: CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGA...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTCAAAGAAGTCAAACTaGAGGGAGATGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRSKKSN*REMRYW
Trigger: CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PPDADFAGPVIVWVVGRLQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...CAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTCCGGTTTCTTTTCTaGACTCGGAATTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQVRFLF*TRNLSW
Trigger: CCAGCTCAAATTCCGAGTGCAGAAAAGAAACCGGAC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTGCTTCTTTGCAGTCGTaGTTGTTGTCATGGAGGACG +
Preference number: 4 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSASLQS*LLSWRT
Trigger: CGTCCTCCATGACAACAAGCACGACTGCAAAGAAGC...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp CCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTCTTGGTCTTCACGTCTaGCCGTACCTGGCCCCCGCA +
Preference number: 4 (lower is better)
Translates to: PPKRGMMTSKCLVEALLPLGLHV*PYLAPA
Trigger: TGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAG...AGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGGGGGGAGAGGGATGGTaGGTTGCCTTCCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMGGEGW*VAFRPP
Trigger: GGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGAGCATCTCGGGACCATaGGTGGAGAGGCGGAAACAG +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGSISGP*VERRKQ
Trigger: CTGTTTCCGCCTCTCCACGCATGGTCCCGAGATGCT...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp GTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGGTAGAAGTGTTTCCTaGAACTGCAGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: VPPPPMDSLTRPLALQVLGRSVS*NCSFDG
Trigger: TCCATCAAAGCTGCAGTTCCAGGAAACACTTCTACC...CAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CCA 90 bp AAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: KGTWEGSTISRATAEKEQCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...CTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp CCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTTCTCCCAGTGCCTCATaGCCTGCCGGAAGACTGCCC +
Preference number: 4 (lower is better)
Translates to: PPKRGMMTSKCLVEALLPSPSAS*PAGRLP
Trigger: GGGCAGTCTTCCGGCAGGCCATGAGGCACTGGGAGA...AGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AAAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGCAGAAGCCGACGACGTaGCCCAGCTCGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: KGAGRRGPSFTSQQEMSQQKPTT*PSSWTT
Trigger: TGTGGTCCACGAGCTGGGCCACGTCGTCGGCTTCTG...CTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAACAGGCCAAGGTCCTCCAAGAGGGAGTGAGCGGGAATAAGGGGCTCAGGGAACATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 4 (lower is better)
Translates to: EQAKVLQEGVSGNKGLREHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...TTCCCTGAGCCCCTTATTCCCGCTCACTCCCTCTTGGAGGACCTTGGCCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTGGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: LVKLAGLGNVPLAEPCPLVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...CAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPNRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: ETQGWRWGPADIPSCHQANRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQNRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGCACAGCCCCCGCGGTTaGGCCGAGAGCACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMHSPRG*AESTRP
Trigger: TGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTG...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGATTTTCTGAGAAGAAGTaGGCCTTGAAGCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: ESTSSVRPEGGGPEWQSGFSEKK*ALKPFL
Trigger: CAAAAAGGGCTTCAAGGCCCACTTCTTCTCAGAAAA...TCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAACCGGCCAGAGGGAGGTaGGCCGGAATGGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKPARGR*AGMAEW
Trigger: CCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGG...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAATTGTCTGAGAAGAAGTaGGCCTTGAAGCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQLSEKK*ALKPFL
Trigger: CAAAAAGGGCTTCAAGGCCCACTTCTTCTCAGACAA...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTTGTCTGAGAAGAAGTaGGCCTTGAAGCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTLSEKK*ALKPFL
Trigger: CAAAAAGGGCTTCAAGGCCCACTTCTTCTCAGACAA...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520982.5
CDS-3UTR CCA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGGTGGATGTCACCTTGTaGTCACAGCCGGCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVVDVTL*SQPASL
Trigger: CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCAC...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACGAGGACGGGGGCCTTaGCGTCTCGCCCGTCGAACA +
Preference number: 4 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKRGRGP*RLARRT
Trigger: TGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCG...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp AAAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGCCGCACTCTGTGGCGTaGGAGGCCTGGAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: KGAGRRGPSFTSQQEMSQPHSVA*EAWKPF
Trigger: AAAGGGCTTCCAGGCCTCCCACGCCACAGAGTGCGG...CTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ACAATACAGCGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: TIQRVETQGWRWGPADIPFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCTTCCCCCACCTCCTATaGACAGTCTCACCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RNDDFEMSCGSSAPWPQPFPHLL*TVSPGH
Trigger: ATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA...GGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGCTTCGAAATGTCTTGTaGAAGCTCTGCTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LCRSPVPPPPMDSLTRPLLRNVL*KLCSLA
Trigger: GGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAG...CAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGACACAGGGATGGCGATaGGGTCCTGCTGACATTCCC +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGTQGWR*GPADIP
Trigger: GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp AGGCCAGTTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAAGAGTGGAGAACGCCTaGCTGGATGTTCTCACGAAC +
Preference number: 4 (lower is better)
Translates to: RPVGAGDGTTGGCHLVVTRVENA*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGCGTTCTCCACTCT...TGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAACTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354870.5
3UTR CAA 72 bp AAGCCCGCTTTGTTAATGGACCCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: KPALLMDPSETN*SQRRLDVLLMS
Trigger: TGACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCCATTAACAAAGCGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
3UTR CAA 72 bp GTGCTTGTTGTCATGGAGGACGAAGCCACTGCGGCATaGGCACTCATAACTGCCGAACGTGTTGACGCAGTC +
Preference number: 4 (lower is better)
Translates to: VLVVMEDEATAA*ALITAERVDAV
Trigger: GACTGCGTCAACACGTTCGGCAGTTATGAGTGCCAATGCCGCAGTGGCTTCGTCCTCCATGACAACAAGCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR TCA 90 bp TCAAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: SREHGKEAPFLEPQLRRSELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...GCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR TCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGGAGCTGTGTGCCGTCTaGGATCCACAGCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGELCAV*DPQPAV
Trigger: TACAGCAGGCTGTGGATCTCAGACGGCACACAGCTC...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp AGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: RNDDFEMSCGSSAPWPQPLELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...GGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGCACAGTAGCGCCCGATaGGGGTGCTGCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWHSSAR*GCCSHC
Trigger: ACAGTGAGAGCAGCACCCTCATCGGGCGCTACTGTG...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTGAGCTGGCCTCTTTTCTaGGAAGAAGTGGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: LVKLAGLGNVPLAEPCPLSWPLF*EEVGLE
Trigger: TTCAAGGCCCACTTCTTCTCAGAAAAGAGGCCAGCT...CAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR TCA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGGCACTCGTCCTTGTCTaGGAAGAAGTGGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLALVLV*EEVGLE
Trigger: TTCAAGGCCCACTTCTTCTCAGACAAGGACGAGTGC...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306385.10
ENST00000354870.5
CDS-3UTR TCA 90 bp ATGGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTGCTTACTGGACAGATCTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: MGVRADQHGSPLPAYWTDLDRVI*VEAQEH
Trigger: ATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAG...ATCTGTCCAGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAACTTCCTCGGCCACAATaGCCCACTCACAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQLPRPQ*PTHSPH
Trigger: GTGTGGACTGTGAGTGGGTCATTGTGGCCGAGGAAG...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTTATCTTCTCTGCAAATaGACAGGCCAAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSYLLCK*TGQGPP
Trigger: TGGAGGACCTTGGCCTGTTCATTTGCAGAGAAGATA...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp GGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACTGAGATCCACAGCCTaGTGTACCTGGAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GAGRRGPSFTSQQEMSQTLRSTA*CTWKAL
Trigger: GAGGGCCTTCCAGGTACAGCAGGCTGTGGATCTCAG...TGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGCTGAGATCCACAGCCTaGTGTACCTGGAAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGLRSTA*CTWKAL
Trigger: GAGGGCCTTCCAGGTACAGCAGGCTGTGGATCTCAG...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMSVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRSVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: VGRLNVAIVLFHITPADGGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTTGCCTGTGCTGTCTTaGAGGGTCTCTCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGLPVLS*RVSPQA
Trigger: AGCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAA...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCCAGGGGAGGAGAAGTTaGCTGTGCTGTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPQGRRS*LCCLAG
Trigger: CCCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTG...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 4 (lower is better)
Translates to: KWLMPESSSPTSYGQSHQFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...CTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 4 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CACCGAAGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: HRSPHPIPSKVRFLSNKGPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...CCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCTTCGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATCCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VETQGWRWGPADIPSCHQDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAAGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAGTGTTGAGGCACCGCTaGTCACAGCCCCCGCGGTTG +
Preference number: 4 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKVLRHR*SQPPRL
Trigger: CAACCGCGGGGGCTGTGAGCAGCGGTGCCTCAACAC...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTCAAACTGCAGGGAGATaGGGTACTGGGTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGQTAGR*GTGWGP
Trigger: TGGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTG...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCAAAGAAGTCAAACTaGAGGGAGATGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVASKKSN*REMRYW
Trigger: CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGA...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp AGAGGAGGATGGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTGCTTACTTCAAAGAAGTCAAACTaGAGGGAGATGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: RGGWGSERTSMGHHYLLTSKKSN*REMRYW
Trigger: CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGA...AGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCCATCCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACACAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTGTCCGGTTTCTTTTCTaGACTCGGAATTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPVRFLF*TRNLSW
Trigger: CCAGCTCAAATTCCGAGTGCAGAAAAGAAACCGGAC...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTGTCCGGTTTCTTTTCTaGACTCGGAATTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSVRFLF*TRNLSW
Trigger: CCAGCTCAAATTCCGAGTGCAGAAAAGAAACCGGAC...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGGTCCGGTTTCTTTTCTaGACTCGGAATTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TGWALVKLAGLGNVPLAEVRFLF*TRNLSW
Trigger: CCAGCTCAAATTCCGAGTGCAGAAAAGAAACCGGAC...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR GCA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGGTCCGGTTTCTTTTCTaGACTCGGAATTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVVRFLF*TRNLSW
Trigger: CCAGCTCAAATTCCGAGTGCAGAAAAGAAACCGGAC...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGTGTCCTGGAACTTGGTaGTGGTGTATCGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLCPGTW*WCIAGG
Trigger: TCCACCTGCGATACACCAGCACCAAGTTCCAGGACA...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTTTTCGGTTTATTGGCTaGGGTGCCCTGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSFRFIG*GALVWL
Trigger: CAGCCACACCAGGGCACCGCAGCCAATAAACCGAAA...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGGTCCTCTCGCCCGCTTaGTTGCTCGATCGCGACCGC +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMVLSPA*LLDRDR
Trigger: GCGGTCGCGATCGAGCAAGCAAGCGGGCGAGAGGAC...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520970.5
CDS-3UTR GCA 90 bp GGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCTCTTCTTTGCAGTCGTaGTTGTTGTCATGGAGGACG +
Preference number: 4 (lower is better)
Translates to: GSGLCRSPVPPPPMDSLTSSLQS*LLSWRT
Trigger: CGTCCTCCATGACAACAAGCACGACTGCAAAGAAGA...GGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520970.5
CDS-3UTR CCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGGGTAGAAGTGTTTCCTaGAACTGCAGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMGRSVS*NCSFDG
Trigger: TCCATCAAAGCTGCAGTTCCAGGAAACACTTCTACC...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGGTAGAAGTGTTTCCTaGAACTGCAGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRGRSVS*NCSFDG
Trigger: TCCATCAAAGCTGCAGTTCCAGGAAACACTTCTACC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAATCTGAGGCTGCCCGTTaGTGCTCTGGCAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKSEAAR*CSGSWG
Trigger: CCCCCAGCTGCCAGAGCACCAACGGGCAGCCTCAGA...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp AGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCTACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 4 (lower is better)
Translates to: RNDDFEMSCGSSAPWPQPYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...GGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGARSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGCTGAGCCGTGTCCTTTaGCCAATGGGAGGTTTCACC +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGLSRVL*PMGGFT
Trigger: GGTGAAACCTCCCATTGGCCAAAGGACACGGCTCAG...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RVETQGWRWGPADIPSCHNRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: CSHERWKRGGPGLAECVRNRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAGTGGCGTGGGAGGCCTaGAAGCCCTTTCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKVAWEA*KPFRWT
Trigger: GGTCCAGCGAAAGGGCTTCCAGGCCTCCCACGCCAC...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACGTGGCGTGGGAGGCCTaGAAGCCCTTTCGCTGGACC +
Preference number: 4 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNVAWEA*KPFRWT
Trigger: GGTCCAGCGAAAGGGCTTCCAGGCCTCCCACGCCAC...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACCCCTGCTCAGGCAGTaGTCACTTCCTGCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVPLLRQ*SLPAVE
Trigger: CTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGG...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGCCAATGGGAGGTTTCACCCCGTTCACCTCATACTTGGGGACAATGGTATCCGGGTTTGTGGGGAAGTaGCTTATGCCGGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: WPMGGFTPFTSYLGTMVSGFVGK*LMPESS
Trigger: ACTGGACTCCGGCATAAGCCACTTCCCCACAAACCC...GGATACCATTGTCCCCAAGTATGAGGTGAACGGGGTGAAACCTCCCATTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCGGGTTTGTGGGGAAGTaGCTTATGCCGGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VGRLNVAIVLFHITPADGGFVGK*LMPESS
Trigger: ACTGGACTCCGGCATAAGCCACTTCCCCACAAACCC...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGCCCAGGAAACTGGGGTaGTGGAATGGGGGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGPRKLG*WNGGSK
Trigger: TTTTGAGCCCCCATTCCACCACCCCAGTTTCCTGGG...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CCA 90 bp GGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGTGCTTACTGGACAGATaGACAAGTGGAAAAATAGAC +
Preference number: 4 (lower is better)
Translates to: GMVRCLPPTPTIQSRRPRCLLDR*TSGKID
Trigger: GTCTATTTTTCCACTTGTCCATCTGTCCAGTAAGCA...CCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GGAAGTTATACTCCTGCCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCCTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: GSYTPALAGCSHERWKRGLELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...GCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGCGCAAGGTCGATAGGTaGACACAATATAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVRKVDR*TQYSCP
Trigger: AGGACAGCTATATTGTGTTCACCTATCGACCTTGCG...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTCAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGCAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TGGCCAATGGGAGGTTTCACCCCGTTCACCTCATACTTGGGGACAATGGTATCCGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: WPMGGFTPFTSYLGTMVSGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...GGATACCATTGTCCCCAAGTATGAGGTGAACGGGGTGAAACCTCCCATTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTAGAAGAAGTGGGCCTTaGAGCCCTTTTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSRRSGP*SPFWTR
Trigger: CCGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCT...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCGCACTCGTCCTTGTCTaGGAAGAAGTGGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: VGRLNVAIVLFHITPADGALVLV*EEVGLE
Trigger: TTCAAGGCCCACTTCTTCTCAGACAAGGACGAGTGC...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520982.5
CDS-3UTR GCA 90 bp GGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACAGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: GAGRRGPSFTSQQEMSQTDLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...TGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSSVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR GCA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: PSVSKKSNCREMRYWVGASVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAGGCCTGCCGGAAGACTaGCCTCTGGCTACCAGTGAA +
Preference number: 4 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQGLPED*PLATSE
Trigger: TTCACTGGTAGCCAGAGGGCAGTCTTCCGGCAGGCC...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAAGGCCGAGTGTGTTCGTaGCAGAAGCCGACGACGTGG +
Preference number: 4 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKGRVCS*QKPTTW
Trigger: CCACGTCGTCGGCTTCTGGCACGAACACACTCGGCC...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCACCTTTCCAACCCAATTaGTGCTGCTGCGGAATTCAA +
Preference number: 4 (lower is better)
Translates to: REVQDDLLPGCDRDAPHAPFQPN*CCCGIQ
Trigger: TTGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGG...TGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 4 (lower is better)
Translates to: SRTQGSLFYFTTGNVTDTARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...GGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 4 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AAAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: KGAGRRGPSFTSQQEMSQVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...CTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: AAELASFPTVPKCPGRWQTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR GCA 90 bp GTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VGRLNVAIVLFHITPADGPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...GCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTCCGGTTTCTTTTCTaGACTCGGAATTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: REVQDDLLPGCDRDAPHAVRFLF*TRNLSW
Trigger: CCAGCTCAAATTCCGAGTGCAGAAAAGAAACCGGAC...TGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR GCA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACTGGAGATGGCCCACGTaGACTCCTTCTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDWRWPT*TPSCWD
Trigger: ATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCA...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR GCA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAACTTGGTCTTCACGTCTaGCCGTACCTGGCCCCCGCA +
Preference number: 4 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKLGLHV*PYLAPA
Trigger: TGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAG...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACGCAGTGGTCACTTCCTaGTGTGGAGTGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EQDAGVPLLLHNRKCHRHAVVTS*CGVCPG
Trigger: TCCAGGACACACTCCACAGCAGGAAGTGACCACTGC...GTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGGCTGACATTCCCTCTTaGCACCAGGCAGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMADIPS*HQAGPP
Trigger: AGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGC...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAGGTCCAAAGGGGCACTaGATCCAGCAGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQGPKGH*IQQDQL
Trigger: CAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACC...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGACAGCCTGCTGTACCTaGAAGGCCCTCAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRTACCT*KALRSS
Trigger: AGAGGACCTGAGGGCCTTCCAGGTACAGCAGGCTGT...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCTGCCCGTTGGTGCTCTaGCAGCTGGGGGTAGAAGTG +
Preference number: 4 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITCPLVL*QLGVEV
Trigger: CACTTCTACCCCCAGCTGCCAGAGCACCAACGGGCA...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TCAAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCCGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: SREHGKEAPFLEPQLRRSRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...GCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAACGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp AGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCCGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: SRTQGSLFYFTTGNVTDTRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...GGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: EQDAGVPLLLHNRKCHRHGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...GTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGTCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAAAGATGCGGTACTGGGTaGGGGCCACCAGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKRCGTG*GPPAAR
Trigger: TCTGGCAGCTGGTGGCCCCCACCCAGTACCGCATCT...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGTTTTCTGAGAAGAAGTaGGCCTTGAAGCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLFSEKK*ALKPFL
Trigger: CAAAAAGGGCTTCAAGGCCCACTTCTTCTCAGAAAA...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGTTTTCTGAGAAGAAGTaGGCCTTGAAGCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GPADIPSCHQAGPPKRGMFSEKK*ALKPFL
Trigger: CAAAAAGGGCTTCAAGGCCCACTTCTTCTCAGAAAA...CATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp TGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGGGAGTAAAGGTCCTTaGTCTTCACGTCTGCCCGTA +
Preference number: 4 (lower is better)
Translates to: CHQAGPPKRGMMTSKCLVGSKGP*SSRLPV
Trigger: TACGGGCAGACGTGAAGACCAAGGACCTTTACTCCC...CACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTGGTCACTTCCTGCTGTaGAGTGTGTCCTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSGHFLL*SVSWNL
Trigger: CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACC...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp AGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCGGGTTTGTGGGGAAGTaGCTTATGCCGGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SRTQGSLFYFTTGNVTDTGFVGK*LMPESS
Trigger: ACTGGACTCCGGCATAAGCCACTTCCCCACAAACCC...GGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
3UTR CAA 72 bp TTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTTTTTCACATCACCCCC +
Preference number: 4 (lower is better)
Translates to: FAGPVIVWVVGR*NVAIVLFHITP
Trigger: GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAACAATGTCCCCCTTGCTaGGCCGTGTCCTTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQQCPPC*AVSFGQ
Trigger: TTGGCCAAAGGACACGGCTCAGCAAGGGGGACATTG...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAGCTTGGAGTCAGCTGTaGGTCCACTGCGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKAWSQL*VHCAPP
Trigger: TGGAGGTGCGCAGTGGACTCACAGCTGACTCCAAGC...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGCTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: CHQAGPPKRGMMTSKCLVLDRVI*VEAQEH
Trigger: ATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAG...CACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRDLRAV*RLRSTA
Trigger: GGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGGGCACTTGTAAAGCTTaGGGGCTTGGGCAATGTCCC +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRGTCKA*GLGQCP
Trigger: GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCC...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACCCTGGATCCGCCAGATaGAGACTTTGCTGGGCCGGT +
Preference number: 4 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNPGSAR*RLCWAG
Trigger: ACCGGCCCAGCAAAGTCTGCATCTGGCGGATCCAGG...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CACCGAAGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: HRSPHPIPSKVRFLSNKGTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...CCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCTTCGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: EQDAGVPLLLHNRKCHRHPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...GTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGGAGGACGAAGCCACTaGGGCATTGGCACTCATAAC +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWGGRSH*GIGTHN
Trigger: GTTATGAGTGCCAATGCCGCAGTGGCTTCGTCCTCC...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGGGTAGAAGTGTTTCCTaGAACTGCAGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVGRSVS*NCSFDG
Trigger: TCCATCAAAGCTGCAGTTCCAGGAAACACTTCTACC...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGCGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTTGTTCTCACGAACGATaGAAACGTGGCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGCSHER*KRGGPG
Trigger: ACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGAAGTTATACTCCTGCCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCCATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 4 (lower is better)
Translates to: GSYTPALAGCSHERWKRGHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...GCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGGGTCTCTCCACAGGCTaGGCACTTGTAAAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRGLSTG*ALVKLA
Trigger: CGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACC...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAAGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: WVVGRLNVAIVLFHITPARCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...TGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTCGTGCTTGTTGTCATaGAGGACGAAGCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRSCLLS*RTKPLR
Trigger: CCGCAGTGGCTTCGTCCTCCATGACAACAAGCACGA...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ACAATACAGCGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCATGGTGTCATCCGAGTaGAACTTCACCAGGACAGAA +
Preference number: 4 (lower is better)
Translates to: TIQRVETQGWRWGPADIPMVSSE*NFTRTE
Trigger: TTCTGTCCTGGTGAAGTTCCACTCGGATGACACCAT...GGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGTATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCTTCGAAATGTCTTGTaGAAGCTCTGCTCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: EQDAGVPLLLHNRKCHRHLRNVL*KLCSLA
Trigger: GGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAG...GTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGTGGAGAACGCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 4 (lower is better)
Translates to: KGTWEGSTISRATAEKEQWRTPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGCGTTCTCCA...CTGCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp TCAAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGAGTGGAGAACGCCTaGCTGGATGTTCTCACGAAC +
Preference number: 4 (lower is better)
Translates to: SREHGKEAPFLEPQLRRSRVENA*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGCGTTCTCCACTCT...GCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAAAGATGGGGAGCCTGTaGACTCCCCAAGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKKMGSL*TPQGSG
Trigger: CCCTGAGCCTTGGGGAGTCCACAGGCTCCCCATCTT...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR TCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACAGGGGTCTTTGTAGTTaGGGGGCTCCGAGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNRGLCS*GAPSRP
Trigger: AGGACGACTCGGAGCCCCTCAACTACAAAGACCCCT...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp AAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: KEQDAGVPLLLHNRKCHRLELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...TCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGCTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRLELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGCGCAAGGTCGATAGGTaGACACAATATAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWRKVDR*TQYSCP
Trigger: AGGACAGCTATATTGTGTTCACCTATCGACCTTGCG...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACAAAGGACTGGAATGTaGGGCCCACGTGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKQRTGM*GPRGSP
Trigger: AGGGCTTCCACGTGGGCCTCACATTCCAGTCCTTTG...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCTGGACGTGCTCTTaGTGTCATCAGGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PPKRGMMTSKCLVEALLPGWTCS*CHQASH
Trigger: ATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCC...AGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTAAGAAGAAGTGGGCCTTaGAGCCCTTTTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVRRSGP*SPFWTR
Trigger: CCGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCT...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGAGAAGAAGTGGGCCTTaGAGCCCTTTTTGGACACGG +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRRRSGP*SPFWTR
Trigger: CCGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCT...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp GAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACAGCTGGCCTCTTTTCTaGGAAGAAGTGGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: EQDAGVPLLLHNRKCHRHSWPLF*EEVGLE
Trigger: TTCAAGGCCCACTTCTTCTCAGAAAAGAGGCCAGCT...GTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGCTTCCTCGGCCACAATaGCCCACTCACAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMLPRPQ*PTHSPH
Trigger: GTGTGGACTGTGAGTGGGTCATTGTGGCCGAGGAAG...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGAAGTTATACTCCTGCCCTGGCTGGATGTTCTCACGAACGATGGAAACGTGGCGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: GSYTPALAGCSHERWKRGDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...GCCACGTTTCCATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACGTGGGGGCCACCAGCTaGCAGATGCAGTTCTTGTTG +
Preference number: 4 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHVGATS*QMQFLL
Trigger: CAACAAGAACTGCATCTGGCAGCTGGTGGCCCCCAC...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGCCACAGAACTTGCCATaGAGCTTGGAGTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWPQNLP*SLESAV
Trigger: CACAGCTGACTCCAAGCTGCATGGCAAGTTCTGTGG...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GAGRRGPSFTSQQEMSQTQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...TGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAATTTCGGTTTATTGGCTaGGGTGCCCTGGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQFRFIG*GALVWL
Trigger: CAGCCACACCAGGGCACCGCAGCCAATAAACCGAAA...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAACGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGGTTATACTCCTGCCCTaGCTGGATGTTCTCACGAAC +
Preference number: 4 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGVILLP*LDVLTN
Trigger: GTTCGTGAGAACATCCAGCCAGGGCAGGAGTATAAC...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471755.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGTCCTTTGGCCAATaGGAGGTTTCACCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWVSFGQ*EVSPRS
Trigger: TGAACGGGGTGAAACCTCCCATTGGCCAAAGGACAC...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPKRGMMTSKCLVEALLPEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...AGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTAGAGCAGAGTAGCCATTaGGGTATTCAGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVEQSSH*GIQGRR
Trigger: TCTCCTCCCCTGAATACCCCAATGGCTACTCTGCTC...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTAGATGCAGACTTTGCTaGGCCGGTAATCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PPKRGMMTSKCLVEALLPRCRLC*AGNRLG
Trigger: ACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCT...AGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGAATGTGAGGCCCACGTaGAAGCCCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMNVRPT*KPSDTW
Trigger: CCAGGTGTCTGAGGGCTTCCACGTGGGCCTCACATT...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAACAGACACCATCAAAATaGGAGGGGGTAGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKQTPSK*EGVGHG
Trigger: CCCGTGCCCTACCCCCTCCCATTTTGATGGTGTCTG...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGATGGTGTCATCCGAGTaGAACTTCACCAGGACAGAA +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWMVSSE*NFTRTE
Trigger: TTCTGTCCTGGTGAAGTTCCACTCGGATGACACCAT...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAATCTCGGGACCATGCGTaGAGAGGCGGAAACAGTGTC +
Preference number: 4 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKSRDHA*RGGNSV
Trigger: GACACTGTTTCCGCCTCTCCACGCATGGTCCCGAGA...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR TCA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAACTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQLELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp CTCAAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCGCAAGGTCGATAGGTaGACACAATATAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LKGTWEGSTISRATAEKERKVDR*TQYSCP
Trigger: AGGACAGCTATATTGTGTTCACCTATCGACCTTGCG...CTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR TCA 90 bp AAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGATCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: KEQDAGVPLLLHNRKCHRSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...TCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp CCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTTCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: PPKRGMMTSKCLVEALLPSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...AGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGGCCAGATGCAGACTTTaGTGGGCCGGTAATCGTCTG +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMARCRL*WAGNRL
Trigger: CAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGC...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAATCAAAGAAGTCAAACTaGAGGGAGATGCGGTACTGG +
Preference number: 4 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQSKKSN*REMRYW
Trigger: CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGA...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGCAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACAGAACCACAGAACTTaGCATGCAGCTTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVQNHRT*HAAWSQ
Trigger: CTGACTCCAAGCTGCATGGCAAGTTCTGTGGTTCTG...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGCTTCTTTGCAGTCGTaGTTGTTGTCATGGAGGACG +
Preference number: 4 (lower is better)
Translates to: PPKRGMMTSKCLVEALLPASLQS*LLSWRT
Trigger: CGTCCTCCATGACAACAAGCACGACTGCAAAGAAGC...AGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR GCA 90 bp AAAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGCACAGCCGGCTTCTTTaGAGTCGTGCTTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: KGAGRRGPSFTSQQEMSQHSRLL*SRACCH
Trigger: ATGACAACAAGCACGACTGCAAAGAAGCCGGCTGTG...CTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR GCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACGCAGTGGTCACTTCCTaGTGTGGAGTGTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNAVVTS*CGVCPG
Trigger: TCCAGGACACACTCCACAGCAGGAAGTGACCACTGC...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGATGCACAGACACTTGTaGCCCAGGAAACTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMMHRHL*PRKLGW
Trigger: CCACCCCAGTTTCCTGGGGCACAAGTGTCTGTGCAT...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGTAGAAGTGTTTCCTaGAACTGCAGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGGRSVS*NCSFDG
Trigger: TCCATCAAAGCTGCAGTTCCAGGAAACACTTCTACC...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGCGGAAGACTGCCCTCTaGCTACCAGTGAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMRKTAL*LPVKFP
Trigger: GGGAAACTTCACTGGTAGCCAGAGGGCAGTCTTCCG...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGCCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAACCAGGAAGATGCCCCTaGAGAATGTGTTCCGAGCGT +
Preference number: 4 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKPGRCP*RMCSER
Trigger: ACGCTCGGAACACATTCTCCAGGGGCATCTTCCTGG...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 4 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDNRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp AGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SRTQGSLFYFTTGNVTDTNRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...GGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTATCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAATCGTGCTTGTTGTCATaGAGGACGAAGCCACTGCGG +
Preference number: 4 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKSCLLS*RTKPLR
Trigger: CCGCAGTGGCTTCGTCCTCCATGACAACAAGCACGA...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CCA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAGGTCACTTCCTGCTGTaGAGTGTGTCCTGGAACTTG +
Preference number: 4 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQGHFLL*SVSWNL
Trigger: CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACC...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACCTGGAACTGCAGCTTTaGTGGAGGACTTACGAGCTG +
Preference number: 4 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNLELQL*WRTYEL
Trigger: CAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAG...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp AAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACGCAAGGTCGATAGGTaGACACAATATAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KEQDAGVPLLLHNRKCHRRKVDR*TQYSCP
Trigger: AGGACAGCTATATTGTGTTCACCTATCGACCTTGCG...TCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR TCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGCGCAAGGTCGATAGGTaGACACAATATAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRRKVDR*TQYSCP
Trigger: AGGACAGCTATATTGTGTTCACCTATCGACCTTGCG...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp TCAAGGGAACATGGGAAGGAAGCACCATTTCTAGAGCCACAGCTGAGAAGGAGCAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: SREHGKEAPFLEPQLRRSSVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...GCTCCTTCTCAGCTGTGGCTCTAGAAATGGTGCTTCCTTCCCATGTTCCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR GCA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAACAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GGCCTGGTGAATGGAGGACTCAAGGGAACATGGGAAGGAAGCACCATTTCTAGAGGTAGAAGTGTTTCCTaGAACTGCAGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: GLVNGGLKGTWEGSTISRGRSVS*NCSFDG
Trigger: TCCATCAAAGCTGCAGTTCCAGGAAACACTTCTACC...TCTAGAAATGGTGCTTCCTTCCCATGTTCCCTTGAGTCCTCCATTCACCAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAATACTCCTGCCCTGGCTaGATGTTCTCACGAACGATG +
Preference number: 4 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKYSCPG*MFSRTM
Trigger: CATCGTTCGTGAGAACATCCAGCCAGGGCAGGAGTA...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471755.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACGTTCACCTCATACTTaGGGACAATGGTATCCAGGA +
Preference number: 4 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVRSPHT*GQWYPG
Trigger: TCCTGGATACCATTGTCCCCAAGTATGAGGTGAACG...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGAATCGTCTGGGTAGTTaGGCGATTGAATGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWNRLGS*AIECGH
Trigger: ATGGCCACATTCAATCGCCCAACTACCCAGACGATT...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACGGGCCGGTAATCGTCTaGGTAGTTGGGCGATTGAAT +
Preference number: 4 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHGPVIV*VVGRLN
Trigger: ATTCAATCGCCCAACTACCCAGACGATTACCGGCCC...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGTTTTCTGAGAAGAAGTaGGCCTTGAAGCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWFSEKK*ALKPFL
Trigger: CAAAAAGGGCTTCAAGGCCCACTTCTTCTCAGAAAA...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR TCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAATCCGAGCGTAATGCATaGTGCTGTCGAAGTCATAGG +
Preference number: 4 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKSERNA*CCRSHR
Trigger: CCTATGACTTCGACAGCATCATGCATTACGCTCGGA...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR TCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACAGCTGGCCTCTTTTCTaGGAAGAAGTGGGCCTTGAA +
Preference number: 4 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNSWPLF*EEVGLE
Trigger: TTCAAGGCCCACTTCTTCTCAGAAAAGAGGCCAGCT...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR TCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGGACCGAGTTATCTaGGTAGAAGCGCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKLDRVI*VEAQEH
Trigger: ATGTTCCTGCGCTTCTACTCAGATAACTCGGTCCAG...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTAGTGTTTCCTGGAACTaGAGCTTTGATGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGSVSWN*SFDGGL
Trigger: AAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACACT...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACTGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAATGGTATCCAGGAAGATaGCCCTGGAGAATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKWYPGR*PWRMCS
Trigger: GGAACACATTCTCCAGGGGCATCTTCCTGGATACCA...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACCAACCCAATTGCTGCTaGTGCGGAATTCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNQPNCC*CGIQPR
Trigger: TCTGGGTTGAATTCCGCAGCAGCAGCAATTGGGTTG...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACTTCCAACCCAATTGCTaGTGCTGCGGAATTCAACCC +
Preference number: 4 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHFQPNC*CCGIQP
Trigger: GGGTTGAATTCCGCAGCAGCAGCAATTGGGTTGGAA...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCACTTGCACACATCATTaGCCTCTGTCTCAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SRTQGSLFYFTTGNVTDTTCTHH*PLSQRS
Trigger: ACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGT...GGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp GGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACATGAAGGTCTTCTTTaGAGTCGTGCTTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GAGRRGPSFTSQQEMSQTHEGLL*SRACCH
Trigger: ATGACAACAAGCACGACTGCAAAGAAGACCTTCATG...TGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520970.5
CDS-3UTR CCA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGGGTAGAAGTGTTTCCTaGAACTGCAGCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRGRSVS*NCSFDG
Trigger: TCCATCAAAGCTGCAGTTCCAGGAAACACTTCTACC...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACCATACTTGGGGACAATaGTATCCAGGAAGATGCCCC +
Preference number: 4 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNHTWGQ*YPGRCP
Trigger: GGGGCATCTTCCTGGATACCATTGTCCCCAAGTATG...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAATCAATCTCAAAGGACTaGAATGTGAGGCCCACGTGG +
Preference number: 4 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKSISKD*NVRPTW
Trigger: CCACGTGGGCCTCACATTCCAGTCCTTTGAGATTGA...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CCA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAATGGTGTCATCCGAGTaGAACTTCACCAGGACAGAA +
Preference number: 4 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQMVSSE*NFTRTE
Trigger: TTCTGTCCTGGTGAAGTTCCACTCGGATGACACCAT...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR GCA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACGATGGCTTCGTAGACTaGAAAGAAGCCCTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNDGFVD*KEALSN
Trigger: GTTGGAAAGGGCTTCTTTGCAGTCTACGAAGCCATC...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR GCA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACTGGGTCACCATTACCTaGTTACTGGACAGATGGACA +
Preference number: 4 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHWVTIT*LLDRWT
Trigger: TGTCCATCTGTCCAGTAAGCAGGTAATGGTGACCCA...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR CCA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGTTTTCTGAGAAGAAGTaGGCCTTGAAGCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWFSEKK*ALKPFL
Trigger: CAAAAAGGGCTTCAAGGCCCACTTCTTCTCAGAAAA...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR CCA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGATGGTGTCATCCGAGTaGAACTTCACCAGGACAGAA +
Preference number: 4 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMMVSSE*NFTRTE
Trigger: TTCTGTCCTGGTGAAGTTCCACTCGGATGACACCAT...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTCCATGAAGGTCAGCTaGACCCGGTGCCCGGGGGTG +
Preference number: 5 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGASMKVS*TRCPGV
Trigger: CACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGA...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: PTPTIQSRRPRAAGSSPRASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...GCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp ACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCCGCCCCACGGGCTCGGGCTTCTaGCTCCCACAGAAGCGGCCG +
Preference number: 5 (lower is better)
Translates to: TPTIQSRRPRAAGSSPRPTGSGF*LPQKRP
Trigger: CGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGT...GGGGCGGGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 5 (lower is better)
Translates to: LRCPGVADRPLGLREALSERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS TCA 90 bp GCCTTCCTGCCTATCCCCTGTCCGGCCCAGCAGGCAGGCCGGGAGTaGGGATCCATGGGCCTGCTCCAGCCAGACTCTGACCTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: AFLPIPCPAQQAGRE*GSMGLLQPDSDLPV
Trigger: GACAGGGAGGTCAGAGTCTGGCTGGAGCAGGCCCATGGATCCTCACTCCCGGCCTGCCTGCTGGGCCGGACAGGGGATAGGCAGGAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS GCA 90 bp AAGGAGGGGAGAAGGAAGGCAGCATGGACTCGGCCGTGGGCATCCTaGCTTCCTGCCTATCCCCTGTCCGGCCCAGCAGGCAGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: KEGRRKAAWTRPWAS*LPAYPLSGPAGRPG
Trigger: TCCCGGCCTGCCTGCTGGGCCGGACAGGGGATAGGCAGGAAGGCAGGATGCCCACGGCCGAGTCCATGCTGCCTTCCTTCTCCCCTCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS GCA 90 bp GAGAAGGAAGGCAGCATGGACTCGGCCGTGGGCATCCTGCCTTCCTaGCTATCCCCTGTCCGGCCCAGCAGGCAGGCCGGGAGTGAGGAT +
Preference number: 5 (lower is better)
Translates to: EKEGSMDSAVGILPS*LSPVRPSRQAGSED
Trigger: ATCCTCACTCCCGGCCTGCCTGCTGGGCCGGACAGGGGATAGGCAGGAAGGCAGGATGCCCACGGCCGAGTCCATGCTGCCTTCCTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS-3UTR CAA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: GSGFLLPQKRPRTGALASIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CGGGACGTCGCCGCCCGCCGGCTACGGGATCTACCTCTCCATCTCCCACAGGCTTTCTGCACTCGGAATTaGAGCTGGTGGGGGCGTCCC +
Preference number: 5 (lower is better)
Translates to: RDVAARRLRDLPLHLPQAFCTRN*SWWGRP
Trigger: GGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGAA...AGCCTGTGGGAGATGGAGAGGTAGATCCCGTAGCCGGCGGGCGGCGACGTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR CAA 90 bp GAGGCCTGGCTGGACTTTCTCCCACCGGGACAGAGCAACAGCTGGCAGAGCTGGGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 5 (lower is better)
Translates to: EAWLDFLPPGQSNSWQSWERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...CCAGCTCTGCCAGCTGTTGCTCTGTCCCGGTGGGAGAAAGTCCAGCCAGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTCACAGCCCCCGCGGTaGGGCCGAGAGCACTCGTCC +
Preference number: 5 (lower is better)
Translates to: AAELASFPTVPKCPGRWQSQPPR*GREHSS
Trigger: GGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp TTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: FPHLLWTVSPGHWPCRSWASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...CCAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp TGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGCTGGTGGATGTCACCTaGTGGTCACAGCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: WLRCPGVADRPLGLREALLVDVT*WSQPAS
Trigger: AGAAGCCGGCTGTGACCACAAGGTGACATCCACCAG...CAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CAA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGTCCATGAAGGTCAGCTaGACCCGGTGCCCGGGGGTG +
Preference number: 5 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGSMKVS*TRCPGV
Trigger: CACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGA...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CAA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGCTCTCGCCCGCTTGCTaGCTCGATCGCGACCGCGAC +
Preference number: 5 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPLSPAC*LDRDRD
Trigger: GTCGCGGTCGCGATCGAGCAAGCAAGCGGGCGAGAG...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000518913.5
CDS GCA 90 bp CAATGTGTGTGCACATGTGTGTGCGTGTGGGCGTGTGTGTCTCCGTaGAGGGCTGAGGGTGGGGCGGGCACAGTGTCGACCAGGGCATGG +
Preference number: 5 (lower is better)
Translates to: QCVCTCVCVWACVSP*RAEGGAGTVSTRAW
Trigger: CCATGCCCTGGTCGACACTGTGCCCGCCCCACCCTCAGCCCTGCACGGAGACACACACGCCCACACGCACACACATGTGCACACACATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS-3UTR CAA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: LSRSAGTCGCLWPGRARAWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...AGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: HSGEKRAPVLSGQREVGRIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GCCAGGACGGGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: ARTGSGFLLPQKRPRTGAWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...GGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGTCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGTCACAGCCCCCGCGGTaGGGCCGAGAGCACTCGTCC +
Preference number: 5 (lower is better)
Translates to: VETQGWRWGPADIPSCHQSQPPR*GREHSS
Trigger: GGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGA...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGTCACAGCCCCCGCGGTaGGGCCGAGAGCACTCGTCC +
Preference number: 5 (lower is better)
Translates to: TGWALVKLAGLGNVPLAESQPPR*GREHSS
Trigger: GGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGA...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CACCGAAGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCACAGCCCCCGCGGTaGGGCCGAGAGCACTCGTCC +
Preference number: 5 (lower is better)
Translates to: HRSPHPIPSKVRFLSNKGSQPPR*GREHSS
Trigger: GGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGA...CCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCTTCGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGGAAGCCACTGCGGCATaGGCACTCATAACTGCCGAA +
Preference number: 5 (lower is better)
Translates to: QKRPRTGALASRPSNTSREATAA*ALITAE
Trigger: TTCGGCAGTTATGAGTGCCAATGCCGCAGTGGCTTC...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTTACTTGTCAGGCCAGTaGGGGCTGGTGATGGTACCA +
Preference number: 5 (lower is better)
Translates to: GSGFLLPQKRPRTGALASYLSGQ*GLVMVP
Trigger: TGGTACCATCACCAGCCCCAACTGGCCTGACAAGTA...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp AGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGACGGGCTCGGGCTTCTaGCTCCCACAGAAGCGGCCG +
Preference number: 5 (lower is better)
Translates to: SPVPPPPMDSLTRPLALQTGSGF*LPQKRP
Trigger: CGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGT...CTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTCGCCCGTCGAACACCTCTAGGCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: QKRPRTGALASRPSNTSRPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...CCTAGAGGTGTTCGACGGGCGAGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGCTGAGCAGGGCCCAGGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: QGGPKGHCIQQDQLSRAQVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...CTGGGCCCTGCTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: SRSAGTCGCLWPGRARASIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp ACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: TQGWRWGPADIPSCHQAGPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...CCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTCCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTTCACAGCCCCCGCGGTaGGGCCGAGAGCACTCGTCC +
Preference number: 5 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLSQPPR*GREHSS
Trigger: GGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGA...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTGCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 5 (lower is better)
Translates to: APVLSGQREVGRNGRVEVLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...CACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: SAGTCGCLWPGRARASCSALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp AGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAGGTTTCTGCACTCGGAATTaGAGCTGGTGGGGGCGTCCC +
Preference number: 5 (lower is better)
Translates to: STSSVRPEGGGPEWQSGGFCTRN*SWWGRP
Trigger: GGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGAA...ACCTCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CCTTGGTCTTCACGTCTGCCCGTACCTGGCCCCCGCACTCTGTGGCGTGGGAGGTTGGAGCACTCGTCCTaGTCTGAGAAGAAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: PWSSRLPVPGPRTLWRGRLEHSS*SEKKWA
Trigger: GGCCCACTTCTTCTCAGACAAGGACGAGTGCTCCAA...CCTCCCACGCCACAGAGTGCGGGGGCCAGGTACGGGCAGACGTGAAGACCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGGGCAGCAGGCTCCAGTCCCTACTTGTCAGGCCAGTaGGGGCTGGTGATGGTACCA +
Preference number: 5 (lower is better)
Translates to: PPTPTIQSRRPRAAGSSPYLSGQ*GLVMVP
Trigger: TGGTACCATCACCAGCCCCAACTGGCCTGACAAGTA...GGGACTGGAGCCTGCTGCCCTTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCTCCATGAAGGTCAGCTaGACCCGGTGCCCGGGGGTG +
Preference number: 5 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGSMKVS*TRCPGV
Trigger: CACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGA...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CAA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGACGGGCTCGGGCTTCTaGCTCCCACAGAAGCGGCCG +
Preference number: 5 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVTGSGF*LPQKRP
Trigger: CGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGT...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 5 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 5 (lower is better)
Translates to: TGWALVKLAGLGNVPLAEERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGCTCTCGCCCGCTTGCTaGCTCGATCGCGACCGCGAC +
Preference number: 5 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVLSPAC*LDRDRD
Trigger: GTCGCGGTCGCGATCGAGCAAGCAAGCGGGCGAGAG...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520970.5
CDS-3UTR CAA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTCCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSPSQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGG...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CAA 90 bp GGCTCGGGCTTCTTGCTCCCACAGAAGCGGCCGAGGACGGGGGCCTTGGCGTCTTTGGAGCACTCGTCCTaGTCTGCAGGGGAGCAAATA +
Preference number: 5 (lower is better)
Translates to: GSGFLLPQKRPRTGALASLEHSS*SAGEQI
Trigger: TATTTGCTCCCCTGCAGACAAGGACGAGTGCTCCAA...AGACGCCAAGGCCCCCGTCCTCGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS GCA 90 bp GCACAGCAGGATCGGCCTAGTGAGCTGGAGCCATTAGCCTCGGAGTaGTGTCCCCAGCATCTCGGGACCATGCGTGGAGAGGCGGAAACA +
Preference number: 5 (lower is better)
Translates to: AQQDRPSELEPLASE*CPQHLGTMRGEAET
Trigger: TGTTTCCGCCTCTCCACGCATGGTCCCGAGATGCTGGGGACAGCACTCCGAGGCTAATGGCTCCAGCTCACTAGGCCGATCCTGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS CCA 90 bp CTCCACTCCTGCCCTTCACTGCATGGGCCTGGGTCCTGTTACCTCTaGAGACCACCAGCTACCTTACAGCCTCACCCCAGGGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: LHSCPSLHGPGSCYL*RPPATLQPHPRVKG
Trigger: GCCCTTCACCCTGGGGTGAGGCTGTAAGGTAGCTGGTGGTCTCCAGAGGTAACAGGACCCAGGCCCATGCAGTGAAGGGCAGGAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS CCA 90 bp GTTTCTTGTGCGATGGGGCAATGTGTGTGCACATGTGTGTGCGTGTaGGCGTGTGTGTCTCCGTGCAGGGCTGAGGGTGGGGCGGGCACA +
Preference number: 5 (lower is better)
Translates to: VSCAMGQCVCTCVCV*ACVSPCRAEGGAGT
Trigger: TGTGCCCGCCCCACCCTCAGCCCTGCACGGAGACACACACGCCCACACGCACACACATGTGCACACACATTGCCCCATCGCACAAGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS-3UTR CAA 90 bp TGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: WGEESTSSVRPEGGGPEWAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...CCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GGCTGGGACTCGATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: GWDSMSISMKVSLTRCPGVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...CCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATCGAGTCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGATCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: ESTSSVRPEGGGPEWQSGSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...TCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGATCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: GDGVLLTFPLATRQGPLRSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...TCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCTCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp AGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: SRSAGTCGCLWPGRARASSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...AGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: PGGAGDGPRALLLAGILVIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCCGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGTCACAGCCCCCGCGGTaGGGCCGAGAGCACTCGTCC +
Preference number: 5 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLSQPPR*GREHSS
Trigger: GGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGA...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GTTAATGGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: VNGPVRDELEPEAAGRALASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...AAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCCATTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: GEKRAPVLSGQREVGRNGALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...GCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 5 (lower is better)
Translates to: LRCPGVADRPLGLREALSEKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...AGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACTGGTGGATGTCACCTaGTGGTCACAGCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GRGMVRCLPPTPTIQSRRLVDVT*WSQPAS
Trigger: AGAAGCCGGCTGTGACCACAAGGTGACATCCACCAG...TCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp TTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGAGAGGGATGGTGCGTaGCCTTCCGCCCACCCCCAC +
Preference number: 5 (lower is better)
Translates to: LCRSPVPPPPMDSLTRPLERDGA*PSAHPH
Trigger: GTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTC...CAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GTTAATGGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTCGTCCTCTCGCCCGCTaGCTTGCTCGATCGCGACCG +
Preference number: 5 (lower is better)
Translates to: VNGPVRDELEPEAAGRALRPLAR*LARSRP
Trigger: CGGTCGCGATCGAGCAAGCAAGCGGGCGAGAGGACG...AAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCCATTAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000518913.5
CDS-3UTR CAA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGCGTCCTCTCGCCCGCTaGCTTGCTCGATCGCGACCG +
Preference number: 5 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSRPLAR*LARSRP
Trigger: CGGTCGCGATCGAGCAAGCAAGCGGGCGAGAGGACG...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000520970.5
CDS-3UTR CAA 90 bp AGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACGGGCTCGGGCTTCTTGCTCCTTGGAGCACTCGTCCTaGTCTGCAGGGGAGCAAATA +
Preference number: 5 (lower is better)
Translates to: SAGTCGCLWPGRARASCSLEHSS*SAGEQI
Trigger: TATTTGCTCCCCTGCAGACAAGGACGAGTGCTCCAA...GGAGCAAGAAGCCCGAGCCCGTCCTGGCCACAGGCAGCCGCATGTTCCTGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS GCA 90 bp CAAGAAAGGCAGCTCCTCAGGGAACGCTGGCTCACCCACACTCTCTaGCCCCACTCCTCCTTGAGTGAAACCCTGGTGCAGAGGCCACAG +
Preference number: 5 (lower is better)
Translates to: QERQLLRERWLTHTL*PHSSLSETLVQRPQ
Trigger: CTGTGGCCTCTGCACCAGGGTTTCACTCAAGGAGGAGTGGGGGCAGAGAGTGTGGGTGAGCCAGCGTTCCCTGAGGAGCTGCCTTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521521.5
CDS CCA 90 bp GCCTCGATGCCCCCAGTGGGGGTCCTCTGCAGGTTTCTTGTGCGATaGGGCAATGTGTGTGCACATGTGTGTGCGTGTGGGCGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: ASMPPVGVLCRFLVR*GNVCAHVCACGRVC
Trigger: ACACACACGCCCACACGCACACACATGTGCACACACATTGCCCCATCGCACAAGAAACCTGCAGAGGACCCCCACTGGGGGCATCGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS-3UTR CAA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGTGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: AAELASFPTVPKCPGRWQWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: AAELASFPTVPKCPGRWQVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: RREHQFCPARGRWAGMAESGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 5 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GGGGGAGAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 5 (lower is better)
Translates to: GGEGWCVAFRPPPLSSLGPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...GCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGAACGGCAAAGCCCGCTTaGTTAATGGACCCGTCAGAG +
Preference number: 5 (lower is better)
Translates to: ESTSSVRPEGGGPEWQSGTAKPA*LMDPSE
Trigger: CTCTGACGGGTCCATTAACAAAGCGGGCTTTGCCGT...TCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCACGGCAAAGCCCGCTTaGTTAATGGACCCGTCAGAG +
Preference number: 5 (lower is better)
Translates to: HRDGDGVLLTFPLATRQGTAKPA*LMDPSE
Trigger: CTCTGACGGGTCCATTAACAAAGCGGGCTTTGCCGT...GCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp TCGGTTTATTGGCTGCGGTGCCCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 5 (lower is better)
Translates to: SVYWLRCPGVADRPLGLRMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...TCTCAGGCCCAGTGGCCGGTCAGCCACACCAGGGCACCGCAGCCAATAAACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 5 (lower is better)
Translates to: HSGEKRAPVLSGQREVGREKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...CCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTTCTGCACTCGGAATTaGAGCTGGTGGGGGCGTCCC +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRFCTRN*SWWGRP
Trigger: GGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGAA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp CCCACGGTGGCTCCTGGGGGACATGCACAGACACTTGTGCCCCAGGAAACTGGGTTGGAGCACTCGTCCTaGTCTGAGAAGAAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: PTVAPGGHAQTLVPQETGLEHSS*SEKKWA
Trigger: GGCCCACTTCTTCTCAGACAAGGACGAGTGCTCCAA...CCCAGTTTCCTGGGGCACAAGTGTCTGTGCATGTCCCCCAGGAGCCACCGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306385.10
ENST00000354870.5
CDS-3UTR CAA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCATACTTGTCAGGCCAGTaGGGGCTGGTGATGGTACCA +
Preference number: 5 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPYLSGQ*GLVMVP
Trigger: TGGTACCATCACCAGCCCCAACTGGCCTGACAAGTA...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGACACGTGCACTCCTTCTaGCTGGGATACTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: ESTSSVRPEGGGPEWQSGHVHSF*LGYLSG
Trigger: GCCTGACAAGTATCCCAGCAAGAAGGAGTGCACGTG...TCCACTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR CAA 90 bp CATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATGGCCCACACGTGCACTCCTTCTaGCTGGGATACTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: HLHEGQLDPVPGGAGDGPHVHSF*LGYLSG
Trigger: GCCTGACAAGTATCCCAGCAAGAAGGAGTGCACGTG...TGGGCCATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAGAGAGAAGCCCTGTCTaGTTTCTCCATCCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQERSPV*FLHPLP
Trigger: GGGGAGGGGATGGAGAAACAAGACAGGGCTTCTCTC...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAAGAGAGAAGCCCTGTCTaGTTTCTCCATCCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GVLLTFPLATRQGPLREEERSPV*FLHPLP
Trigger: GGGGAGGGGATGGAGAAACAAGACAGGGCTTCTCTC...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS GCA 90 bp AGTGGGGGTCCTCTGCAGGTTTCTTGTGCGATGGGGCAATGTGTGTaGACATGTGTGTGCGTGTGGGCGTGTGTGTCTCCGTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SGGPLQVSCAMGQCV*TCVCVWACVSPCRA
Trigger: AGCCCTGCACGGAGACACACACGCCCACACGCACACACATGTGCACACACATTGCCCCATCGCACAAGAAACCTGCAGAGGACCCCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS CCA 90 bp GCCATTAGCCTCGGAGTGCTGTCCCCAGCATCTCGGGACCATGCGTaGAGAGGCGGAAACAGTGTCTGTCCCACAACAGGGGTTTCCCAA +
Preference number: 5 (lower is better)
Translates to: AISLGVLSPASRDHA*RGGNSVCPTTGVSQ
Trigger: TTGGGAAACCCCTGTTGTGGGACAGACACTGTTTCCGCCTCTCCACGCATGGTCCCGAGATGCTGGGGACAGCACTCCGAGGCTAATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CAA 90 bp TGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: WGEESTSSVRPEGGGPEWPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...CCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: GPVRDELEPEAAGRALDVAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: AAELASFPTVPKCPGRWQAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTTGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GATGCTGTCGAAGTCATAGGTCTCCCCCAGGGACTCCACCTCCTGAGGCTCCATTGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: DAVEVIGLPQGLHLLRLHWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...ATGGAGCCTCAGGAGGTGGAGTCCCTGGGGGAGACCTATGACTTCGACAGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCTGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: GSGLCRSPVPPPPMDSLTWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...GGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: AAELASFPTVPKCPGRWQVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCAATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVAIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CAA 90 bp GCGGCTGGACGTGCTCTTGATGTCATCAGGCTTCTCATAGCCACAGTAGCGCCCATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: AAGRALDVIRLLIATVAPIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...GGGCGCTACTGTGGCTATGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCAGCTGAGTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: GQATRGSKGALHPAGPAEWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...CTCAGCTGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAACGGCAAAGCCCGCTTaGTTAATGGACCCGTCAGAG +
Preference number: 5 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQTAKPA*LMDPSE
Trigger: CTCTGACGGGTCCATTAACAAAGCGGGCTTTGCCGT...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAAACGGCAAAGCCCGCTTaGTTAATGGACCCGTCAGAG +
Preference number: 5 (lower is better)
Translates to: GVLLTFPLATRQGPLREETAKPA*LMDPSE
Trigger: CTCTGACGGGTCCATTAACAAAGCGGGCTTTGCCGT...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACTCACAGCCCCCGCGGTaGGGCCGAGAGCACTCGTCC +
Preference number: 5 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDSQPPR*GREHSS
Trigger: GGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGA...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 5 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 5 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GATGTCCATCTCCATGAAGGTCAGCTTGACCCGGTGCCCGGGGGTGCTGGAGATCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 5 (lower is better)
Translates to: DVHLHEGQLDPVPGGAGDLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...ATCTCCAGCACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGAGATGGACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 5 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCACTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 5 (lower is better)
Translates to: ETQGWRWGPADIPSCHQALVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 5 (lower is better)
Translates to: AAELASFPTVPKCPGRWQLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCTTCTGCACTCGGAATTaGAGCTGGTGGGGGCGTCCC +
Preference number: 5 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAFCTRN*SWWGRP
Trigger: GGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGAA...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR CAA 90 bp TTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGTTGGAGCACTCGTCCTaGTCTGAGAAGAAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: FPHLLWTVSPGHWPCRSWLEHSS*SEKKWA
Trigger: GGCCCACTTCTTCTCAGACAAGGACGAGTGCTCCAA...CCAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GTGGGAGGCCAGGCGACAAGGGGGTCCAAAGGGGCACTGCATCCAGCAGGACCATCTTTGCAGTCGTGCTaGTTGTCATGGAGGACGAAG +
Preference number: 5 (lower is better)
Translates to: VGGQATRGSKGALHPAGPSLQSC*LSWRTK
Trigger: CTTCGTCCTCCATGACAACAAGCACGACTGCAAAGA...TGGTCCTGCTGGATGCAGTGCCCCTTTGGACCCCCTTGTCGCCTGGCCTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCTGGTGGATGTCACCTaGTGGTCACAGCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPLVDVT*WSQPAS
Trigger: AGAAGCCGGCTGTGACCACAAGGTGACATCCACCAG...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTACTTGTCAGGCCAGTaGGGGCTGGTGATGGTACCA +
Preference number: 5 (lower is better)
Translates to: GWALVKLAGLGNVPLAEPYLSGQ*GLVMVP
Trigger: TGGTACCATCACCAGCCCCAACTGGCCTGACAAGTA...CGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCGTCCTCTCGCCCGCTaGCTTGCTCGATCGCGACCG +
Preference number: 5 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSRPLAR*LARSRP
Trigger: CGGTCGCGATCGAGCAAGCAAGCGGGCGAGAGGACG...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354870.5
ENST00000518913.5
CDS-3UTR CAA 90 bp TCAGGAAGTTATACTCCTGCCCTGAGGGTCCGGGGAGCAGCCAAGGGGAGCCTGCCTGGAACTGCAGCTTaGATGGAGGACTTACGAGCT +
Preference number: 5 (lower is better)
Translates to: SGSYTPALRVRGAAKGSLPGTAA*MEDLRA
Trigger: AGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAGG...CAGGCTCCCCTTGGCTGCTCCCCGGACCCTCAGGGCAGGAGTATAACTTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518656.5
CDS-3UTR CAA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp TTGAGCTTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: LSLVRNPPQAAAGTRKVASGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...TGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAAGCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CAA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAACCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 5 (lower is better)
Translates to: GVLLTFPLATRQGPLREEPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 5 (lower is better)
Translates to: PAPAQAVVTSCCGVCPGTPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...AGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGCGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: RPCSGSGHFLLWSVSWNLRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...CAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp GGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCACGGCAAAGCCCGCTTaGTTAATGGACCCGTCAGAG +
Preference number: 5 (lower is better)
Translates to: GSLHRLGTCKACGLGQCPTAKPA*LMDPSE
Trigger: CTCTGACGGGTCCATTAACAAAGCGGGCTTTGCCGT...GGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGACGGCAAAGCCCGCTTaGTTAATGGACCCGTCAGAG +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRTAKPA*LMDPSE
Trigger: CTCTGACGGGTCCATTAACAAAGCGGGCTTTGCCGT...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp GCACAGTGGGGAGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGCACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: AQWGEESTSSVRPEGGGPHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...CGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCTCCCCACTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp AAAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGTCACAGCCCCCGCGGTaGGGCCGAGAGCACTCGTCC +
Preference number: 5 (lower is better)
Translates to: KGAGRRGPSFTSQQEMSQSQPPR*GREHSS
Trigger: GGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGA...CTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp TGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 5 (lower is better)
Translates to: WLMPESSSPTSYGQSHQAMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...GGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 5 (lower is better)
Translates to: CSHERWKRGGPGLAECVRLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CGCTGCTCACAGCCCCCGCGGTTGGGCCGAGAGCACTCGTCCACCTCTTTGAAATCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: RCSQPPRLGREHSSTSLKSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...TTTCAAAGAGGTGGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGAGCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp GTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGGCCCTGCAGGTCCTGGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 5 (lower is better)
Translates to: VPPPPMDSLTRPLALQVLEKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...CAGGACCTGCAGGGCCAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTGATGTCGAAGCCACTGCGGCATaGGCACTCATAACTGCCGAA +
Preference number: 5 (lower is better)
Translates to: GPVRDELEPEAAGRALDVEATAA*ALITAE
Trigger: TTCGGCAGTTATGAGTGCCAATGCCGCAGTGGCTTC...GACATCAAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CCCCGCCCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTCTTTGCAGTCGTGCTaGTTGTCATGGAGGACGAAG +
Preference number: 5 (lower is better)
Translates to: PRPCSGSGHFLLWSVSWNSLQSC*LSWRTK
Trigger: CTTCGTCCTCCATGACAACAAGCACGACTGCAAAGA...GTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGGGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAATCACAGCCGGCTTCTTaGCAGTCGTGCTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQSQPAS*QSCLLS
Trigger: TGACAACAAGCACGACTGCAAAGAAGCCGGCTGTGA...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp TGGCCAATGGGAGGTTTCACCCCGTTCACCTCATACTTGGGGACAATGGTATCCTCCATGAAGGTCAGCTaGACCCGGTGCCCGGGGGTG +
Preference number: 5 (lower is better)
Translates to: WPMGGFTPFTSYLGTMVSSMKVS*TRCPGV
Trigger: CACCCCCGGGCACCGGGTCAAGCTGACCTTCATGGA...GGATACCATTGTCCCCAAGTATGAGGTGAACGGGGTGAAACCTCCCATTGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp AGAGGAGGATGGGGGTCCGAGCGGACCAGCATGGGTCACCATTACCTGCTTACTGAGAGAAGCCCTGTCTaGTTTCTCCATCCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: RGGWGSERTSMGHHYLLTERSPV*FLHPLP
Trigger: GGGGAGGGGATGGAGAAACAAGACAGGGCTTCTCTC...AGTAAGCAGGTAATGGTGACCCATGCTGGTCCGCTCGGACCCCCATCCTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCTCTCGCCCGCTTGCTaGCTCGATCGCGACCGCGAC +
Preference number: 5 (lower is better)
Translates to: EQDAGVPLLLHNRKCHRHLSPAC*LDRDRD
Trigger: GTCGCGGTCGCGATCGAGCAAGCAAGCGGGCGAGAG...GTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518913.5
ENST00000520970.5
CDS GCA 90 bp TTGATGGAGGACTTACGAGCTGTGTGCCGTCTGAGATCCACAGCCTaGTGTACCTGGAAGGCCCTCAGGTCCTCTTCGTCCAGGGCAATG +
Preference number: 5 (lower is better)
Translates to: LMEDLRAVCRLRSTA*CTWKALRSSSSRAM
Trigger: CATTGCCCTGGACGAAGAGGACCTGAGGGCCTTCCAGGTACAGCAGGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTCCTCCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000306349.13
ENST00000306385.10
ENST00000354870.5
ENST00000397814.7
ENST00000471755.5
ENST00000483364.5
ENST00000518656.5
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
ENST00000521385.5
ENST00000521521.5
ENST00000523849.1
CDS-3UTR CAA 90 bp AGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGCCTGGAACTGCAGCTTaGATGGAGGACTTACGAGCT +
Preference number: 5 (lower is better)
Translates to: SPHPIPSKVRFLSNKGSGPGTAA*MEDLRA
Trigger: AGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAGG...CCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: AAELASFPTVPKCPGRWQPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp CTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: LVMVPLVDVTLWSQPASLVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...CAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCATCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: REVQDDLLPGCDRDAPHASGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...TGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 5 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp AGAAGAGAGCACCAGTTCTGTCCGGCCAGAGGGAGGTGGGCCGGAATGGCAGAGTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: RREHQFCPARGRWAGMAEWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...CTCTGCCATTCCGGCCCACCTCCCTCTGGCCGGACAGAACTGGTGCTCTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: GVLLTFPLATRQGPLREEWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...TTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGCCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGACGGCAAAGCCCGCTTaGTTAATGGACCCGTCAGAG +
Preference number: 5 (lower is better)
Translates to: TGWALVKLAGLGNVPLAETAKPA*LMDPSE
Trigger: CTCTGACGGGTCCATTAACAAAGCGGGCTTTGCCGT...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCACGGCAAAGCCCGCTTaGTTAATGGACCCGTCAGAG +
Preference number: 5 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGTAKPA*LMDPSE
Trigger: CTCTGACGGGTCCATTAACAAAGCGGGCTTTGCCGT...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTTGGAGCACTCGTCCTTGTCTGCAGGGGAGCAAATAAGGGCAGACGCTGGGTCACGGCAAAGCCCGCTTaGTTAATGGACCCGTCAGAG +
Preference number: 5 (lower is better)
Translates to: LGALVLVCRGANKGRRWVTAKPA*LMDPSE
Trigger: CTCTGACGGGTCCATTAACAAAGCGGGCTTTGCCGT...GACCCAGCGTCTGCCCTTATTTGCTCCCCTGCAGACAAGGACGAGTGCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp AAAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: KGAGRRGPSFTSQQEMSQASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...CTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CCTGGTGTGGCTGACCGGCCACTGGGCCTGAGAGAAGCCCTGTCTTGTTTCTCCTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: PGVADRPLGLREALSCFSSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...GGAGAAACAAGACAGGGCTTCTCTCAGGCCCAGTGGCCGGTCAGCCACACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: CSHERWKRGGPGLAECVRALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GCTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 5 (lower is better)
Translates to: AAELASFPTVPKCPGRWQEKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...CTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGAGAAGCCACTGCGGCATaGGCACTCATAACTGCCGAA +
Preference number: 5 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGEATAA*ALITAE
Trigger: TTCGGCAGTTATGAGTGCCAATGCCGCAGTGGCTTC...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CCGCCAGATGCAGACTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGGAAGCCACTGCGGCATaGGCACTCATAACTGCCGAA +
Preference number: 5 (lower is better)
Translates to: PPDADFAGPVIVWVVGRLEATAA*ALITAE
Trigger: TTCGGCAGTTATGAGTGCCAATGCCGCAGTGGCTTC...CAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAGTCTGCATCTGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CATCTCCATGAAGGTCTTCTTTGCAGTCGTGCTTGTTGTCATGGAGGACGAAGCACGGGCTCGGGCTTCTaGCTCCCACAGAAGCGGCCG +
Preference number: 5 (lower is better)
Translates to: HLHEGLLCSRACCHGGRSTGSGF*LPQKRP
Trigger: CGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGT...GCTTCGTCCTCCATGACAACAAGCACGACTGCAAAGAAGACCTTCATGGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520970.5
CDS-3UTR CAA 90 bp AAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGAGAGAAGCCCTGTCTaGTTTCTCCATCCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: KWLMPESSSPTSYGQSHQERSPV*FLHPLP
Trigger: GGGGAGGGGATGGAGAAACAAGACAGGGCTTCTCTC...CTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGGCAAACACTTTCGGTTTATaGGCTGCGGTGCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: ETQGWRWGPADIPSCHQANTFGL*AAVPWC
Trigger: ACACCAGGGCACCGCAGCCAATAAACCGAAAGTGTT...TGCCTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520970.5
CDS TCA 90 bp CAGGGAGTTTGGACCCGCAGAAGCGGCCTGAAGTCTCGCAGCAAGTaGGTAATGCAGCTATCTGGGACTAATGATGCCAGGACTCCTGGC +
Preference number: 5 (lower is better)
Translates to: QGVWTRRSGLKSRSK*VMQLSGTNDARTPG
Trigger: GCCAGGAGTCCTGGCATCATTAGTCCCAGATAGCTGCATTACTCACTTGCTGCGAGACTTCAGGCCGCTTCTGCGGGTCCAAACTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523749.5
CDS GCA 90 bp GTGTTTCCTGGAACTGCAGCTTTGATGGAGGACTTACGAGCTGTGTaGCGTCTGAGATCCACAGCCTGCTGTACCTGGAAGGCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: VFPGTAALMEDLRAV*RLRSTACCTWKALR
Trigger: CCTGAGGGCCTTCCAGGTACAGCAGGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAGGAAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000306349.13
ENST00000306385.10
ENST00000354870.5
ENST00000397814.7
ENST00000471755.5
ENST00000483364.5
ENST00000518656.5
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
ENST00000521385.5
ENST00000521521.5
ENST00000523849.1
CDS-3UTR CAA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CAA 90 bp CAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: QGLSTGWALVKLAGLGNVPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...GACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp TTGGTGAGGAATCCGCCACAAGCAGCTGCGGGGACAAGGAAGGTGGCATCGTCTCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 5 (lower is better)
Translates to: LVRNPPQAAAGTRKVASSPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...AGACGATGCCACCTTCCTTGTCCCCGCAGCTGCTTGTGGCGGATTCCTCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS-3UTR CAA 90 bp CATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGTCCGGGAGGCCTCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 5 (lower is better)
Translates to: HPIPSKVRFLSNKGSGRPPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...AGGCCTCCCGGACCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: VAYAGVQFPHLLWTVSPGWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...GCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACCCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAACACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CCCTTGCTGGTGGGGGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: PLLVGVCGEVAYAGVQFPHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...GGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACCCCCACCAGCAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp AATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACTCACAGCCCCCGCGGTaGGGCCGAGAGCACTCGTCC +
Preference number: 5 (lower is better)
Translates to: NRLGSWAIECGHSPFSHHSQPPR*GREHSS
Trigger: GGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGA...GTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAATCACAGCCCCCGCGGTaGGGCCGAGAGCACTCGTCC +
Preference number: 5 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKSQPPR*GREHSS
Trigger: GGACGAGTGCTCTCGGCCCAACCGCGGGGGCTGTGA...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp AGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 5 (lower is better)
Translates to: RNDDFEMSCGSSAPWPQPLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...GGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 5 (lower is better)
Translates to: VGKWLMPESSSPTSYGQSEKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...AGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 5 (lower is better)
Translates to: PSVSKKSNCREMRYWVGAEKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAAGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 5 (lower is better)
Translates to: LAGSLHRLGTCKACGLGQEKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...TTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTTCTGCACTCGGAATTaGAGCTGGTGGGGGCGTCCC +
Preference number: 5 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGFCTRN*SWWGRP
Trigger: GGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGAA...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR CAA 90 bp TGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTCTGGTGGATGTCACCTaGTGGTCACAGCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: WYHWWMSPCGHSRLLCSRLVDVT*WSQPAS
Trigger: AGAAGCCGGCTGTGACCACAAGGTGACATCCACCAG...ACGACTGCAAAGAAGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GAGGGATGGTGCGTTGCCTTCCGCCCACCCCCACTATCCAGTCTAGGCGACCAAAGGTGGAAACCTTTTTaGGTGATGGTGTCATCCGAG +
Preference number: 5 (lower is better)
Translates to: EGWCVAFRPPPLSSLGDQRWKPF*VMVSSE
Trigger: CTCGGATGACACCATCACCAAAAAAGGTTTCCACCT...TTGGTCGCCTAGACTGGATAGTGGGGGTGGGCGGAAGGCAACGCACCATCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp CGTGTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACAACACTTTCGGTTTATaGGCTGCGGTGCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: RVETQGWRWGPADIPSCHNTFGL*AAVPWC
Trigger: ACACCAGGGCACCGCAGCCAATAAACCGAAAGTGTT...GTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520970.5
CDS-3UTR CAA 90 bp TGCTGTCTTGCAGGGTCTCTCCACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTCCTGGAACTGCAGCTTaGATGGAGGACTTACGAGCT +
Preference number: 5 (lower is better)
Translates to: CCLAGSLHRLGTCKACGLPGTAA*MEDLRA
Trigger: AGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAGG...AAGCCCGCAAGCTTTACAAGTGCCCAGCCTGTGGAGAGACCCTGCAAGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GACATTCCCTCTTGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: DIPSCHQAGPPKRGMMTSPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...CGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCAAGAGGGAATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTGCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: LVKLAGLGNVPLAEPCPLPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...CAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAATGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp TGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGCAATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: WVVGRLNVAIVLFHITPAIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...TGCGGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GTTAATGGACCCGTCAGAGACGAACTTGAGCCAGAGGCGGCTGGACGTGCTCTTCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 5 (lower is better)
Translates to: VNGPVRDELEPEAAGRALPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...AAGAGCACGTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGGGTCCATTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp ACAGGCTGGGCACTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: TGWALVKLAGLGNVPLAEWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...CTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAGTGCCCAGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CCCTGCTCAGGCAGTGGTCACTTCCTGCTGTGGAGTGTGTCCTGGAACTTGGTGTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: PCSGSGHFLLWSVSWNLVWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...CACCAAGTTCCAGGACACACTCCACAGCAGGAAGTGACCACTGCCTGAGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGCGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGCACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp TCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACGCCTCACAGCGGCGCTaGTCTGGGGCCAGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: STKSYLHTSLPSVSKKSNASQRR*SGASSY
Trigger: GTACGAGCTGGCCCCAGACAAGCGCCGCTGTGAGGC...GTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp ATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCTTGATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 5 (lower is better)
Translates to: MMTSKCLVEALLPGPSPLMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...CAAGGGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 5 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CCCGGGGGTGCTGGAGATGGCCCACGTGCACTCCTTCTTGCTGGGATACTTGTCTACTTGCACACATCATaGCCCTCTGTCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: PGGAGDGPRALLLAGILVYLHTS*PSVSKK
Trigger: CTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTA...GACAAGTATCCCAGCAAGAAGGAGTGCACGTGGGCCATCTCCAGCACCCCCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp TGTTCTCACGAACGATGGAAACGTGGCGGTCCCGGTCTGGCCGAGTGTGTTCGTTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: CSHERWKRGGPGLAECVRSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...ACGAACACACTCGGCCAGACCGGGACCGCCACGTTTCCATCGTTCGTGAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GTAGAGACACAGGGATGGCGATGGGGTCCTGCTGACATTCCCTCTTGCCACCAGTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: VETQGWRWGPADIPSCHQSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...CTGGTGGCAAGAGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GACGTGAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 5 (lower is better)
Translates to: DVKFRMIFSPGVTEMRHTEKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...CGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTCACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp TTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTTCTTTGCAGTCGTGCTaGTTGTCATGGAGGACGAAG +
Preference number: 5 (lower is better)
Translates to: LGLVMVPLVDVTLWSQPASLQSC*LSWRTK
Trigger: CTTCGTCCTCCATGACAACAAGCACGACTGCAAAGA...AGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGACGGGCTCGGGCTTCTaGCTCCCACAGAAGCGGCCG +
Preference number: 5 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMTGSGF*LPQKRP
Trigger: CGGCCGCTTCTGTGGGAGCAAGAAGCCCGAGCCCGT...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GTCGTACCAGCACAGGCGGCTGCGGTACAGGTCCAGGGACGTGAAGTTCAGGATAGGTGGAAACCTTTTTaGGTGATGGTGTCATCCGAG +
Preference number: 5 (lower is better)
Translates to: VVPAQAAAVQVQGREVQDRWKPF*VMVSSE
Trigger: CTCGGATGACACCATCACCAAAAAAGGTTTCCACCT...ATCCTGAACTTCACGTCCCTGGACCTGTACCGCAGCCGCCTGTGCTGGTACGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTTGTAAAGCTTGCGGGCTTGGGCAATGTCCCCCTTGCTGAGCCGTGTCCTTTGAACACTTTCGGTTTATaGGCTGCGGTGCCCTGGTGT +
Preference number: 5 (lower is better)
Translates to: LVKLAGLGNVPLAEPCPLNTFGL*AAVPWC
Trigger: ACACCAGGGCACCGCAGCCAATAAACCGAAAGTGTT...CAAAGGACACGGCTCAGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354870.5
CDS-3UTR CAA 90 bp AGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: SRTQGSLFYFTTGNVTDTAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...GGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTTGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCCCGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: VWVVGRLNVAIVLFHITPVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...GGGGGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp AGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTGGCCCCAGCCCCCCTTTCCAACCCAATaGCTGCTGCTGCGGAATTCA +
Preference number: 5 (lower is better)
Translates to: RNDDFEMSCGSSAPWPQPPFPTQ*LLLRNS
Trigger: TGAATTCCGCAGCAGCAGCAATTGGGTTGGAAAGGG...GGGCTGGGGCCAGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CTTTGCTGGGCCGGTAATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LCWAGNRLGSWAIECGHSRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...ACTATGGCCACATTCAATCGCCCAACTACCCAGACGATTACCGGCCCAGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CACCGAAGCCCCCATCCCATTCCGTCCAAGGTGAGGTTCCTGAGTAACAAGGGGCACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: HRSPHPIPSKVRFLSNKGHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...CCCCTTGTTACTCAGGAACCTCACCTTGGACGGAATGGGATGGGGGCTTCGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GGACCGAGTTATCTGAGTAGAAGCGCAGGAACATGCGGCTGCCTGTGGCCAGGACACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GPSYLSRSAGTCGCLWPGHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...TCCTGGCCACAGGCAGCCGCATGTTCCTGCGCTTCTACTCAGATAACTCGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
CDS-3UTR CAA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 5 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTGCAGAGCTGGCCTCTTTTCCTACAGTGCCCAAATGCCCCGGAAGGTGGCAGGTACTTGCACACATCATaGCCCTCTGTCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: LQSWPLFLQCPNAPEGGRYLHTS*PSVSKK
Trigger: CTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTA...CCTGCCACCTTCCGGGGCATTTGGGCACTGTAGGAAAAGAGGCCAGCTCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521385.5
CDS-3UTR CAA 90 bp AAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGATTCTGCACTCGGAATTaGAGCTGGTGGGGGCGTCCC +
Preference number: 5 (lower is better)
Translates to: KEQDAGVPLLLHNRKCHRFCTRN*SWWGRP
Trigger: GGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGAA...TCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGTTCTGCACTCGGAATTaGAGCTGGTGGGGGCGTCCC +
Preference number: 5 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWFCTRN*SWWGRP
Trigger: GGGACGCCCCCACCAGCTCAAATTCCGAGTGCAGAA...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
CDS-3UTR CAA 90 bp TGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGAAGCCACTGCGGCATaGGCACTCATAACTGCCGAA +
Preference number: 5 (lower is better)
Translates to: CHQAGPPKRGMMTSKCLVEATAA*ALITAE
Trigger: TTCGGCAGTTATGAGTGCCAATGCCGCAGTGGCTTC...CACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACATCTTTGCAGTCGTGCTaGTTGTCATGGAGGACGAAG +
Preference number: 5 (lower is better)
Translates to: VCGEVAYAGVQFPHLLWTSLQSC*LSWRTK
Trigger: CTTCGTCCTCCATGACAACAAGCACGACTGCAAAGA...TGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCCAGGTGGAAACCTTTTTaGGTGATGGTGTCATCCGAG +
Preference number: 5 (lower is better)
Translates to: PSVSKKSNCREMRYWVGARWKPF*VMVSSE
Trigger: CTCGGATGACACCATCACCAAAAAAGGTTTCCACCT...GGCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp TTGGGGCTGGTGATGGTACCACTGGTGGATGTCACCTTGTGGTCACAGCCGGCTAGGTGGAAACCTTTTTaGGTGATGGTGTCATCCGAG +
Preference number: 5 (lower is better)
Translates to: LGLVMVPLVDVTLWSQPARWKPF*VMVSSE
Trigger: CTCGGATGACACCATCACCAAAAAAGGTTTCCACCT...AGCCGGCTGTGACCACAAGGTGACATCCACCAGTGGTACCATCACCAGCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp AAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGAGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: KEQDAGVPLLLHNRKCHRAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...TCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAGTTGCCTGTGCTGTCTaGCAGGGTCTCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQVACAV*QGLSTG
Trigger: GCCTGTGGAGAGACCCTGCAAGACAGCACAGGCAAC...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp AAAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGTCAGGGGAGGAGAAGTaGCCTGTGCTGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: KGAGRRGPSFTSQQEMSQSGEEK*PVLSCR
Trigger: CCTGCAAGACAGCACAGGCAACTTCTCCTCCCCTGA...CTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAACGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAACCGTCAGAGACGAACTaGAGCCAGAGGCGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKPSETN*SQRRLD
Trigger: GTCCAGCCGCCTCTGGCTCAAGTTCGTCTCTGACGG...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp TTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACAGTCTCACCAGGCCATTGCACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LCRSPVPPPPMDSLTRPLHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...CAATGGCCTGGTGAGACTGTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GAAGTTCAGGATGATCTTCTCCCCGGGTGTGACAGAGATGCGCCACACGCAGTGCACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: EVQDDLLPGCDRDAPHAVHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...CACTGCGTGTGGCGCATCTCTGTCACACCCGGGGAGAAGATCATCCTGAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 5 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 5 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGCTGGTGATGGAGCCGTaGAGCTTGGTGAGGAATCCG +
Preference number: 5 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWLVMEP*SLVRNP
Trigger: CGGATTCCTCACCAAGCTCAACGGCTCCATCACCAG...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGGGCTACTTGCACACATCATaGCCCTCTGTCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: ALCLKEVKLQGDAVLGGGYLHTS*PSVSKK
Trigger: CTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTA...GCCCCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GGTTTGTGGGGAAGTGGCTTATGCCGGAGTCCAGTTCCCCCACCTCCTATGGACTACTTGCACACATCATaGCCCTCTGTCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: GLWGSGLCRSPVPPPPMDYLHTS*PSVSKK
Trigger: CTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTA...GTCCATAGGAGGTGGGGGAACTGGACTCCGGCATAAGCCACTTCCCCACAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGTCACAGCCGGCTTCTTaGCAGTCGTGCTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWSQPAS*QSCLLS
Trigger: TGACAACAAGCACGACTGCAAAGAAGCCGGCTGTGA...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp TGTGGCCATAGTCCTTTTTCACATCACCCCCGCAGATGGCTTCGTAGACTGCAACACGTGCACTCCTTCTaGCTGGGATACTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: CGHSPFSHHPRRWLRRLQHVHSF*LGYLSG
Trigger: GCCTGACAAGTATCCCAGCAAGAAGGAGTGCACGTG...TTGCAGTCTACGAAGCCATCTGCGGGGGTGATGTGAAAAAGGACTATGGCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCCGTTCACCTCATACTaGGGGACAATGGTATCCAGG +
Preference number: 5 (lower is better)
Translates to: EQDAGVPLLLHNRKCHRHPFTSY*GTMVSR
Trigger: CCTGGATACCATTGTCCCCAAGTATGAGGTGAACGG...GTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCGCTGAGCCGTGTCCTTaGGCCAATGGGAGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITAEPCP*ANGRFH
Trigger: GTGAAACCTCCCATTGGCCAAAGGACACGGCTCAGC...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGTGGGCAATGTCCCCCTaGCTGAGCCGTGTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMWAMSP*LSRVLW
Trigger: CCAAAGGACACGGCTCAGCAAGGGGGACATTGCCCA...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMIGSGS*DPQKRP
Trigger: AGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTAT...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp TGGCCAATGGGAGGTTTCACCCCGTTCACCTCATACTTGGGGACAATGGTATCCTGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: WPMGGFTPFTSYLGTMVSWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...GGATACCATTGTCCCCAAGTATGAGGTGAACGGGGTGAAACCTCCCATTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp AAAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 5 (lower is better)
Translates to: KGAGRRGPSFTSQQEMSQMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...CTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp ACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGATGGAGCCGTTGAGCTaGGTGAGGAATCCGCCACAA +
Preference number: 5 (lower is better)
Translates to: TSLPSVSKKSNCREMRYWMEPLS*VRNPPQ
Trigger: TTGTGGCGGATTCCTCACCAAGCTCAACGGCTCCAT...CCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: HCPLSQRSQTAGRCGTGWSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...CCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp TGGCCAATGGGAGGTTTCACCCCGTTCACCTCATACTTGGGGACAATGGTATCCTCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: WPMGGFTPFTSYLGTMVSSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...GGATACCATTGTCCCCAAGTATGAGGTGAACGGGGTGAAACCTCCCATTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp AAGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGAGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: KEQDAGVPLLLHNRKCHRALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...TCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp TGCCACCAGGCAGGGCCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGTCTTTGCAGTCGTGCTaGTTGTCATGGAGGACGAAG +
Preference number: 5 (lower is better)
Translates to: CHQAGPPKRGMMTSKCLVSLQSC*LSWRTK
Trigger: CTTCGTCCTCCATGACAACAAGCACGACTGCAAAGA...CACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGGCCCTGCCTGGTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACATCACAGCCGGCTTCTTaGCAGTCGTGCTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: GAGRRGPSFTSQQEMSQTSQPAS*QSCLLS
Trigger: TGACAACAAGCACGACTGCAAAGAAGCCGGCTGTGA...TGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520626.6
CDS-3UTR CAA 90 bp CCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTCCTGGAACTGCAGCTTaGATGGAGGACTTACGAGCT +
Preference number: 5 (lower is better)
Translates to: PPKRGMMTSKCLVEALLPPGTAA*MEDLRA
Trigger: AGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAGG...AGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTCCTGGAACTGCAGCTTaGATGGAGGACTTACGAGCT +
Preference number: 5 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGPGTAA*MEDLRA
Trigger: AGCTCGTAAGTCCTCCATCAAAGCTGCAGTTCCAGG...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAGTAAAGCTTGCGGGCTaGGGCAATGTCCCCCTTGCT +
Preference number: 5 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKVKLAG*GNVPLA
Trigger: AGCAAGGGGGACATTGCCCAAGCCCGCAAGCTTTAC...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAACGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGAGAAGAAGTGGGCCTaGAAGCCCTTTTTGGACACG +
Preference number: 5 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGEKKWA*KPFLDT
Trigger: CGTGTCCAAAAAGGGCTTCAAGGCCCACTTCTTCTC...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTCACAGCCGGCTTCTTaGCAGTCGTGCTTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRSQPAS*QSCLLS
Trigger: TGACAACAAGCACGACTGCAAAGAAGCCGGCTGTGA...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354870.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACGGCTGGACGTGCTCTaGATGTCATCAGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKRLDVL*MSSGFS
Trigger: TGAGAAGCCTGATGACATCAAGAGCACGTCCAGCCG...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAAACGGCAAAGCCCGCTTaGTTAATGGACCCGTCAGAG +
Preference number: 5 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKTAKPA*LMDPSE
Trigger: CTCTGACGGGTCCATTAACAAAGCGGGCTTTGCCGT...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp ATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTGGGTACTTGCACACATCATaGCCCTCTGTCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: IALCLKEVKLQGDAVLGGYLHTS*PSVSKK
Trigger: CTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTA...CCCACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp GCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTATCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: AHIIALCLKEVKLQGDAVSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...TACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAAGCCTTGAAGCCCTTTTaGGACACGGTGTTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKALKPF*DTVLSD
Trigger: GTCCGACAACACCGTGTCCAAAAAGGGCTTCAAGGC...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp ATGAAAATAATGCCCCCGGTGATACACAATACAGCGTGTAGAGACACAGGGATGCACGTGCACTCCTTCTaGCTGGGATACTTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: MKIMPPVIHNTACRDTGMHVHSF*LGYLSG
Trigger: GCCTGACAAGTATCCCAGCAAGAAGGAGTGCACGTG...CATCCCTGTGTCTCTACACGCTGTATTGTGTATCACCGGGGGCATTATTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
CDS-3UTR CAA 90 bp AGGAGCAGGACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACAGGTGGAAACCTTTTTaGGTGATGGTGTCATCCGAG +
Preference number: 5 (lower is better)
Translates to: RSRTQGSLFYFTTGNVTDRWKPF*VMVSSE
Trigger: CTCGGATGACACCATCACCAAAAAAGGTTTCCACCT...GTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTCCTGCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp TTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGCACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LHTSLPSVSKKSNCREMRHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...CCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTACTTGCACACATCATaGCCCTCTGTCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: HHCPLSQRSQTAGRCGTGYLHTS*PSVSKK
Trigger: CTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTA...CCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CTCCACGAAGTCGTACTTGCACACATCATTGCCCTCTGTCTCAAAGAAGTCAAATGGGTAGTTGGGCGATaGAATGTGGCCATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: LHEVVLAHIIALCLKEVKWVVGR*NVAIVL
Trigger: AAGGACTATGGCCACATTCAATCGCCCAACTACCCA...TTTGACTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp ATCGTCTGGGTAGTTGGGCGATTGAATGTGGCCATAGTCCTTTTTCACATCACCCACTCGTCCACCTCTTaGAAAAAGTTGACGGCAAAG +
Preference number: 5 (lower is better)
Translates to: IVWVVGRLNVAIVLFHITHSSTS*KKLTAK
Trigger: CTTTGCCGTCAACTTTTTCAAAGAGGTGGACGAGTG...GGTGATGTGAAAAAGGACTATGGCCACATTCAATCGCCCAACTACCCAGACGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354870.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CCCCCTAAGAGAGGAATGATGACTTCGAAATGTCTTGTGGAAGCTCTGCTCCCTTACTTGCACACATCATaGCCCTCTGTCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: PPKRGMMTSKCLVEALLPYLHTS*PSVSKK
Trigger: CTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTA...AGGGAGCAGAGCTTCCACAAGACATTTCGAAGTCATCATTCCTCTCTTAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306385.10
ENST00000354870.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp ATCATTGCCCTCTGTCTCAAAGAAGTCAAACTGCAGGGAGATGCGGTACTGGGTTACTTGCACACATCATaGCCCTCTGTCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: IIALCLKEVKLQGDAVLGYLHTS*PSVSKK
Trigger: CTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTA...ACCCAGTACCGCATCTCCCTGCAGTTTGACTTCTTTGAGACAGAGGGCAATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000518913.5
ENST00000520626.6
ENST00000520982.5
CDS-3UTR CAA 90 bp CGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAAAATCCACGAAGTCGTACTaGCACACATCATTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: RRGPSFTSQQEMSQTPSKSTKSY*HTSLPS
Trigger: AGAGGGCAATGATGTGTGCAAGTACGACTTCGTGGA...TTTTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS-3UTR CAA 90 bp GACGCAGGGGTCCCTCTTTTACTTCACAACAGGAAATGTCACAGACACCATCAATACTTGCACACATCATaGCCCTCTGTCTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: DAGVPLLLHNRKCHRHHQYLHTS*PSVSKK
Trigger: CTTCTTTGAGACAGAGGGCAATGATGTGTGCAAGTA...TTGATGGTGTCTGTGACATTTCCTGTTGTGAAGTAAAAGAGGGACCCCTGCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306349.13
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
CDS GCA 72 bp GGCAGCATGGACTCGGCCGTGGGCATCCTGCCTTCCTaGCTATCCCCTGTCCGGCCCAGCAGGCAGGCCGGG +
Preference number: 6 (lower is better)
Translates to: GSMDSAVGILPS*LSPVRPSRQAG
Trigger: CCCGGCCTGCCTGCTGGGCCGGACAGGGGATAGGCAGGAAGGCAGGATGCCCACGGCCGAGTCCATGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS CCA 72 bp AGTCCCAGGTGGGCACAGGGAAGGAAGAAATTGGCCTaGCATGGGGAGGGTCTCAGCAAGCGGGGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: SPRWAQGRKKLA*HGEGLSKRGLG
Trigger: CCCCAACCCCCGCTTGCTGAGACCCTCCCCATGCCAGGCCAATTTCTTCCTTCCCTGTGCCCACCTGGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS CCA 72 bp GCGATGGGGCAATGTGTGTGCACATGTGTGTGCGTGTaGGCGTGTGTGTCTCCGTGCAGGGCTGAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: AMGQCVCTCVCV*ACVSPCRAEGG
Trigger: CCCACCCTCAGCCCTGCACGGAGACACACACGCCCACACGCACACACATGTGCACACACATTGCCCCATCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS GCA 72 bp GATCGGCCTAGTGAGCTGGAGCCATTAGCCTCGGAGTaGTGTCCCCAGCATCTCGGGACCATGCGTGGAGAG +
Preference number: 6 (lower is better)
Translates to: DRPSELEPLASE*CPQHLGTMRGE
Trigger: CTCTCCACGCATGGTCCCGAGATGCTGGGGACAGCACTCCGAGGCTAATGGCTCCAGCTCACTAGGCCGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS GCA 72 bp CAGCTCCTCAGGGAACGCTGGCTCACCCACACTCTCTaGCCCCACTCCTCCTTGAGTGAAACCCTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: QLLRERWLTHTL*PHSSLSETLVQ
Trigger: CTGCACCAGGGTTTCACTCAAGGAGGAGTGGGGGCAGAGAGTGTGGGTGAGCCAGCGTTCCCTGAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521521.5
CDS CCA 72 bp CTCGGAGTGCTGTCCCCAGCATCTCGGGACCATGCGTaGAGAGGCGGAAACAGTGTCTGTCCCACAACAGGG +
Preference number: 6 (lower is better)
Translates to: LGVLSPASRDHA*RGGNSVCPTTG
Trigger: CCCTGTTGTGGGACAGACACTGTTTCCGCCTCTCCACGCATGGTCCCGAGATGCTGGGGACAGCACTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471755.5
CDS CAA 90 bp CTATCTGGGACTAATGATGCCAGGACTCCTGGCTCCCATACCAGGTaGTCATCCCTGGCCAGTGTTGGGCCCTCGGAGGGGCGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: LSGTNDARTPGSHTR*SSLASVGPSEGRLP
Trigger: AGGAAGGCGCCCCTCCGAGGGCCCAACACTGGCCAGGGATGACAACCTGGTATGGGAGCCAGGAGTCCTGGCATCATTAGTCCCAGATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523749.5
CDS TCA 72 bp CAAGAAAGGCAGCCGCCTTGCAGGGGTCTTTGTAGTTaGGGGGCTCCGAGTCGTCCTCCTCCGCCAGGTCAT +
Preference number: 6 (lower is better)
Translates to: QERQPPCRGLCS*GAPSRPPPPGH
Trigger: ATGACCTGGCGGAGGAGGACGACTCGGAGCCCCTCAACTACAAAGACCCCTGCAAGGCGGCTGCCTTTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000306349.13
ENST00000306385.10
ENST00000354870.5
ENST00000397814.7
ENST00000471755.5
ENST00000483364.5
ENST00000518656.5
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
ENST00000521385.5
CDS CCA 72 bp GCTGTGTGCCGTCTGAGATCCACAGCCTGCTGTACCTaGAAGGCCCTCAGGTCCTCTTCGTCCAGGGCAATG +
Preference number: 6 (lower is better)
Translates to: AVCRLRSTACCT*KALRSSSSRAM
Trigger: CATTGCCCTGGACGAAGAGGACCTGAGGGCCTTCCAGGTACAGCAGGCTGTGGATCTCAGACGGCACACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000306349.13
ENST00000306385.10
ENST00000354870.5
ENST00000397814.7
ENST00000471755.5
ENST00000483364.5
ENST00000518656.5
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
ENST00000521385.5
ENST00000521521.5
ENST00000523849.1
CDS CCA 72 bp CCCCCAGTGGGGGTCCTCTGCAGGTTTCTTGTGCGATaGGGCAATGTGTGTGCACATGTGTGTGCGTGTGGG +
Preference number: 6 (lower is better)
Translates to: PPVGVLCRFLVR*GNVCAHVCACG
Trigger: CCCACACGCACACACATGTGCACACACATTGCCCCATCGCACAAGAAACCTGCAGAGGACCCCCACTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS CAA 72 bp ACTAATGATGCCAGGACTCCTGGCTCCCATACCAGGTaGTCATCCCTGGCCAGTGTTGGGCCCTCGGAGGGG +
Preference number: 6 (lower is better)
Translates to: TNDARTPGSHTR*SSLASVGPSEG
Trigger: CCCCTCCGAGGGCCCAACACTGGCCAGGGATGACAACCTGGTATGGGAGCCAGGAGTCCTGGCATCATTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523749.5
CDS CAA 72 bp ACTAATGATGCCAGGACTCCTGGCTCCCATACCAGGTaGTCATCCCTGGCCAGTGTTGGGCCCTGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: TNDARTPGSHTR*SSLASVGPWRG
Trigger: CCCCCTCCAGGGCCCAACACTGGCCAGGGATGACAACCTGGTATGGGAGCCAGGAGTCCTGGCATCATTAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523457.5
CDS GCA 72 bp GACTTACGAGCTGTGTGCCGTCTGAGATCCACAGCCTaGTGTACCTGGAAGGCCCTCAGGTCCTCTTCGTCC +
Preference number: 6 (lower is better)
Translates to: DLRAVCRLRSTA*CTWKALRSSSS
Trigger: GGACGAAGAGGACCTGAGGGCCTTCCAGGTACAGCAGGCTGTGGATCTCAGACGGCACACAGCTCGTAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000306349.13
ENST00000306385.10
ENST00000354870.5
ENST00000397814.7
ENST00000471755.5
ENST00000483364.5
ENST00000518656.5
ENST00000518913.5
ENST00000520626.6
ENST00000520970.5
ENST00000520982.5
ENST00000521385.5
ENST00000521521.5
ENST00000523849.1
CDS GCA 72 bp TCTTGTGCGATGGGGCAATGTGTGTGCACATGTGTGTaGGTGTGGGCGTGTGTGTCTCCGTGCAGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SCAMGQCVCTCV*VWACVSPCRAE
Trigger: CTCAGCCCTGCACGGAGACACACACGCCCACACGCACACACATGTGCACACACATTGCCCCATCGCACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS CAA 90 bp TCAACCCAGAGGCGGCTGTCAGTGGAGACGATAGGCTCAGGGAGTTaGGACCCGCAGAAGCGGCCTGAAGTCTCGCAGCAAGTGAGTAAT +
Preference number: 6 (lower is better)
Translates to: STQRRLSVETIGSGS*DPQKRPEVSQQVSN
Trigger: ATTACTCACTTGCTGCGAGACTTCAGGCCGCTTCTGCGGGTCCAAACTCCCTGAGCCTATCGTCTCCACTGACAGCCGCCTCTGGGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523749.5
CDS GCA 72 bp CCTCTGCAGGTTTCTTGTGCGATGGGGCAATGTGTGTaGACATGTGTGTGCGTGTGGGCGTGTGTGTCTCCG +
Preference number: 6 (lower is better)
Translates to: PLQVSCAMGQCV*TCVCVWACVSP
Trigger: CGGAGACACACACGCCCACACGCACACACATGTGCACACACATTGCCCCATCGCACAAGAAACCTGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522332.1
CDS TCA 72 bp GACCCACGTAGGAGCAGCACCCGCAAGGTCGATAGGTaGACACAATATAGCTGTCCTCGTCAGTGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: DPRRSSTRKVDR*TQYSCPRQCAP
Trigger: TGGAGCGCACTGACGAGGACAGCTATATTGTGTTCACCTATCGACCTTGCGGGTGCTGCTCCTACGTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306349.13
ENST00000306385.10
ENST00000354870.5
ENST00000471755.5
ENST00000483364.5
ENST00000520970.5
ENST00000521385.5
CDS TCA 72 bp TGGACCCGCAGAAGCGGCCTGAAGTCTCGCAGCAAGTaGGTAATGCAGCTATCTGGGACTAATGATGCCAGG +
Preference number: 6 (lower is better)
Translates to: WTRRSGLKSRSK*VMQLSGTNDAR
Trigger: CCTGGCATCATTAGTCCCAGATAGCTGCATTACTCACTTGCTGCGAGACTTCAGGCCGCTTCTGCGGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523749.5