Pregenerated sensors for BMI1 (Homo sapiens)
Ensembl gene IDs: ENSG00000168283Ensembl transcript IDs: ENST00000376663.8, ENST00000416820.5, ENST00000442508.5, ENST00000456675.2, ENST00000602358.5, ENST00000602523.1, ENST00000602524.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGTTAGTTGAGATTAACAAACTATGGCCCAATGCTTATGTCCACTaGAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTC | + |
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Preference number: 1 (lower is better) Translates to: ALVEINKLWPNAYVH*RVLPNPNNGYRNHF Trigger: GAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGGACATAAGCATTGGGCCATAGTTTGTTAATCTCAACTAACGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAAATCGTTATTCACAGTaGCATGGCTACATAGAATGC | + |
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Preference number: 2 (lower is better) Translates to: SLLVSKAQHRLWVSAKVENRYSQ*HGYIEC Trigger: GCATTCTATGTAGCCATGTCACTGTGAATAACGATT...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAAAGTTCACTTTTCTTTaGTCGGTTTTGCGTAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: SLLVSKAQHRLWVSAKVEKFTFL*SVLRSN Trigger: GTTGCTACGCAAAACCGATCAAAGAAAAGTGAACTT...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAGAGATTAACAAACTATaGCCCAATGCTTATGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SLLVSKAQHRLWVSAKVEEINKL*PNAYVH Trigger: GTGGACATAAGCATTGGGCCATAGTTTGTTAATCTC...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAAGAAAAAGTCTTGCCTaGTTTCCAAGAAACCAATTC | + |
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Preference number: 2 (lower is better) Translates to: SLLVSKAQHRLWVSAKVERKSLA*FPRNQF Trigger: GAATTGGTTTCTTGGAAAGCAGGCAAGACTTTTTCT...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAATTCTTTGATCGGTTTTaGGTAGCAACAGAGAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: SLLVSKAQHRLWVSAKVEFFDRF*VATEKY Trigger: ATACTTCTCTGTTGCTACGCAAAACCGATCAAAGAA...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| 3UTR CCA 72 bp | TATTCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATaGGTATCTGCAAAGGTCGAACCAGTTGGGAGAATT | + |
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Preference number: 3 (lower is better) Translates to: YSLLVSKAQHRL*VSAKVEPVGRI Trigger: AATTCTCCCAACTGGTTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCAGACGCCGCTGTCAATaGGCAACCAGCGCGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIRRRCQ*ATSAAP Trigger: CGGGGCCGCGCTGGTTGCCCATTGACAGCGGCGTCT...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR TCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCGCCAAGCGGCCATCTTaGAGCGAGCTGCAGACGCCG | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIAKRPS*SELQTP Trigger: CGGCGTCTGCAGCTCGCTTCAAGATGGCCGCTTGGC...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR GCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAACGATCGGTTTTATTCTaGGGGGCTGGGAGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVERSVLF*GAGRCC Trigger: GCAGCACCTCCCAGCCCCGCAGAATAAAACCGATCG...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR GCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAGGAGGGAATACCTCCTaGTGGGCTGTTGGCCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVEGGNTS*WAVGLV Trigger: GACAAGGCCAACAGCCCAGCAGGAGGTATTCCCTCC...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAACTCCTGCTGGGCTGTTaGCCTTGTCACTCCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVELLLGC*PCHSQS Trigger: ACTCTGGGAGTGACAAGGCCAACAGCCCAGCAGGAG...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCTTTATTCTGCGGGGCTaGGAGGTGCTGCTAAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIFILRG*EVLLSR Trigger: CCGGCTTAGCAGCACCTCCCAGCCCCGCAGAATAAA...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAGGGAATACCTCCTGCTaGGCTGTTGGCCTTGTCACT | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVEGNTSC*AVGLVT Trigger: AGTGACAAGGCCAACAGCCCAGCAGGAGGTATTCCC...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR GCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCCGATTATTTCATAGTTaGTGTGGGGGAGGCGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIRLFHS*CGGGGR Trigger: CCGCCCGCCTCCCCCACAGCAACTATGAAATAATCG...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR GCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCCATCTTGAAGCGAGCTaGAGACGCCGCTGTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIHLEAS*RRRCQW Trigger: CCATTGACAGCGGCGTCTGCAGCTCGCTTCAAGATG...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR TCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCTCGTTCAGCAGAAAATaGATGCGAGCCAAGCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPISFSRK*MRAKRP Trigger: TGGCCGCTTGGCTCGCATTCATTTTCTGCTGAACGA...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAGCAAAAGAAGATTGGTaGTTACCGCTGGGGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVEAKEDW*LPLGLL Trigger: CAACAGCCCCAGCGGTAACCACCAATCTTCTTTTGC...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR GCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAATCTCGCCCCGATCTCTaGCTCTCATACTACGATTAT | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVESRPDL*LSYYDY Trigger: ATAATCGTAGTATGAGAGGCAGAGATCGGGGCGAGA...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCTTGGCAAAAGAAGATTaGTGGTTACCGCTGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPILAKED*WLPLGL Trigger: CAGCCCCAGCGGTAACCACCAATCTTCTTTTGCCAA...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR GCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAACAAACTATGGCCCAATaGTTATGTCCACTGCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVEQTMAQ*LCPLQS Trigger: ACTCTGCAGTGGACATAAGCATTGGGCCATAGTTTG...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR TCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAAGTGGTCTGGTCTTGTaGACTTGGACATCACAAATA | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVESGLVL*TWTSQI Trigger: TATTTGTGATGTCCAAGTTCACAAGACCAGACCACT...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR TCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAAGTCCATCTCTCTGGTaGCTGATCTTCATTCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVESPSLW*LIFILL Trigger: TAAAAGAATGAAGATCAGTCACCAGAGAGATGGACT...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR GCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAAGCAGAAGGATGAGCTaGATAAAAATCCCTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVESRRMS*IKIPSS Trigger: AGAAGAAGGGATTTTTATGCAGCTCATCCTTCTGCT...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCGTATTTCAATGGAAGTaGACCATTCCTTCTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIVFQWK*TIPSPG Trigger: ACCTGGAGAAGGAATGGTCCACTTCCATTGAAATAC...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCGCTCAACATAGGTTATaGGTATCTGCAAAGGTCGAA | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIAQHRL*VSAKVE Trigger: TTCGACCTTTGCAGATACCCATAACCTATGTTGAGC...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR TCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCGTTCCTCCTCATACATaGCATCAATCTGGAAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIVPPHT*HQSGKY Trigger: ATACTTTCCAGATTGATGTCATGTATGAGGAGGAAC...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR TCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCCATCTCTCTGGTGACTaGTCTTCATTCTTTTACAAG | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIHLSGD*SSFFYK Trigger: CTTGTAAAAGAATGAAGATCAGTCACCAGAGAGATG...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR TCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCAATCGTTATTCACAGTaGCATGGCTACATAGAATGC | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPINRYSQ*HGYIEC Trigger: GCATTCTATGTAGCCATGTCACTGTGAATAACGATT...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR GCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCTCTCTTATCTTCATCTaGAACCTCTCCTCTATCTTC | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPISLIFI*NLSSIF Trigger: GAAGATAGAGGAGAGGTTGCAGATGAAGATAAGAGA...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCTATTCAGTAGTGGTCTaGTCTTGTGAACTTGGACAT | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIYSVVV*SCELGH Trigger: ATGTCCAAGTTCACAAGACCAGACCACTACTGAATA...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAATTTTCGAGGTCTATTaGCAAAAGAAGATTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVEIFEVY*QKKIGG Trigger: ACCACCAATCTTCTTTTGCCAATAGACCTCGAAAAT...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAATCCAAATCCAAACAATaGTTACAGAAACCATTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVESKSKQ*LQKPFP Trigger: GGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGA...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCGAGATTAACAAACTATaGCCCAATGCTTATGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIEINKL*PNAYVH Trigger: GTGGACATAAGCATTGGGCCATAGTTTGTTAATCTC...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR GCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCAGAAACTTTCTTAAGTaGATCACAGTCATTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIRNFLK*ITVIAA Trigger: AGCAGCAATGACTGTGATGCACTTAAGAAAGTTTCT...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR GCA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCAGAAAAAGTCTTGCCTaGTTTCCAAGAAACCAATTC | + |
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Preference number: 4 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIRKSLA*FPRNQF Trigger: GAATTGGTTTCTTGGAAAGCAGGCAAGACTTTTTCT...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CCA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAATACATGACATCAATCTaGAAAGTATTAGGTATGTCC | + |
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Preference number: 4 (lower is better) Translates to: SLLVSKAQHRLWVSAKVEYMTSI*KVLGMS Trigger: GGACATACCTAATACTTTCCAGATTGATGTCATGTA...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS GCA 90 bp | GCGGCCGCCACGCTCGTCTCATGCCGCCTCCGGCCGGCCTCCTCCTaGTCCGGCGCCTCGGCCTCCTCCGGCGCCTCGGCCTCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: AAATLVSCRLRPASS*SGASASSGASASSS Trigger: GGAGGAGGAGGCCGAGGCGCCGGAGGAGGCCGAGGCGCCGGAGCAGGAGGAGGCCGGCCGGAGGCGGCATGAGACGAGCGTGGCGGCCGC 80% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CAA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCGCGCCCACATCCCCATaGTCTCGCCCCGATCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIAPTSP*SRPDLC Trigger: GCAGAGATCGGGGCGAGACAATGGGGATGTGGGCGC...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CAA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCAGCCAAGCGGCCATCTaGAAGCGAGCTGCAGACGCC | + |
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Preference number: 5 (lower is better) Translates to: PLQSTSKSKQWLQKPFPISQAAI*KRAADA Trigger: GGCGTCTGCAGCTCGCTTCAAGATGGCCGCTTGGCT...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CAA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCGCTGGGCTGTTGGCCTaGTCACTCCCAGAGTCACTT | + |
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Preference number: 5 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIAGLLA*SLPESL Trigger: AAGTGACTCTGGGAGTGACAAGGCCAACAGCCCAGC...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CAA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCTTACCGCTGGGGCTGTaGCTGGTTCCATTCATAGTA | + |
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Preference number: 5 (lower is better) Translates to: PLQSTSKSKQWLQKPFPILPLGL*LVPFIV Trigger: TACTATGAATGGAACCAGCAACAGCCCCAGCGGTAA...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CAA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCATTGGCAAAAGAAGATaGGTGGTTACCGCTGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIIGKRR*VVTAGA Trigger: AGCCCCAGCGGTAACCACCAATCTTCTTTTGCCAAT...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CAA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCTCTTCATTAGAGCCATaGGCAGCATCAGCAGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: PLQSTSKSKQWLQKPFPISSLEP*AASAEG Trigger: TCCTTCTGCTGATGCTGCCAATGGCTCTAATGAAGA...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CAA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAATTTAGCTCAGTGATCTaGATTCTCGTTGTTCGATGC | + |
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Preference number: 5 (lower is better) Translates to: SLLVSKAQHRLWVSAKVEFSSVI*ILVVRC Trigger: GCATCGAACAACGAGAATCAAGATCACTGAGCTAAA...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CAA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAATCTGGTCTTGTGAACTaGGACATCACAAATAGGACA | + |
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Preference number: 5 (lower is better) Translates to: SLLVSKAQHRLWVSAKVESGLVN*DITNRT Trigger: TGTCCTATTTGTGATGTCCAAGTTCACAAGACCAGA...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CAA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAGATTTTCGAGGTCTATaGGCAAAAGAAGATTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SLLVSKAQHRLWVSAKVEDFRGL*AKEDWW Trigger: CCACCAATCTTCTTTTGCCAATAGACCTCGAAAATC...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CAA 90 bp | TCTTTGCTGGTAAGCAAGGCTCAACATAGGTTATGGGTATCTGCAAAGGTCGAAATCAACCAGAAGAAGTaGCTGATGACCCATTTACTG | + |
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Preference number: 5 (lower is better) Translates to: SLLVSKAQHRLWVSAKVEINQKK*LMTHLL Trigger: CAGTAAATGGGTCATCAGCAACTTCTTCTGGTTGAT...TTCGACCTTTGCAGATACCCATAACCTATGTTGAGCCTTGCTTACCAGCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS-3UTR CAA 90 bp | CCACTGCAGAGTACTTCCAAATCCAAACAATGGTTACAGAAACCATTTCCCATCAGAAAGATGTGCCAATaGCTTCTAATGGAACAGACT | + |
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Preference number: 5 (lower is better) Translates to: PLQSTSKSKQWLQKPFPIRKMCQ*LLMEQT Trigger: AGTCTGTTCCATTAGAAGCAATTGGCACATCTTTCT...GATGGGAAATGGTTTCTGTAACCATTGTTTGGATTTGGAAGTACTCTGCAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS TCA 90 bp | ATCATTAACAGTTTTCAAATTCCAGGTCGAACTGTGAAATACGCATaGTACAAAAGAGAGCTAAAGCTCGGTACTTACAGGAATGTAGAC | + |
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Preference number: 5 (lower is better) Translates to: IINSFQIPGRTVKYA*YKRELKLGTYRNVD Trigger: GTCTACATTCCTGTAAGTACCGAGCTTTAGCTCTCTTTTGTATCATGCGTATTTCACAGTTCGACCTGGAATTTGAAAACTGTTAATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000602358.5 ENST00000602523.1 ENST00000602524.1 |
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| CDS CCA 72 bp | GGCCATCTTGAAGCGAGCTGCAGACGCCGCTGTCAATaGGCAACCAGCGCGGCCCCGAGCAGCCGCGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GHLEASCRRRCQ*ATSAAPSSRGR Trigger: GCGGCCGCGGCTGCTCGGGGCCGCGCTGGTTGCCCATTGACAGCGGCGTCTGCAGCTCGCTTCAAGATGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000376663.8 ENST00000602523.1 |
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| CDS GCA 72 bp | AATGAATGCGAGCCAAGCGGCCATCTTGAAGCGAGCTaGAGACGCCGCTGTCAATGGGCAACCAGCGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: NECEPSGHLEAS*RRRCQWATSAA Trigger: GGCCGCGCTGGTTGCCCATTGACAGCGGCGTCTGCAGCTCGCTTCAAGATGGCCGCTTGGCTCGCATTCATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000376663.8 ENST00000602523.1 |
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| CDS GCA 72 bp | CCCGCGCCCACATCCCCATTGTCTCGCCCCGATCTCTaGCTCTCATACTACGATTATTTCATAGTTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PAPTSPLSRPDL*LSYYDYFIVAV Trigger: CACAGCAACTATGAAATAATCGTAGTATGAGAGGCAGAGATCGGGGCGAGACAATGGGGATGTGGGCGCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376663.8 |
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| CDS TCA 72 bp | AGTTTTCAAATTCCAGGTCGAACTGTGAAATACGCATaGTACAAAAGAGAGCTAAAGCTCGGTACTTACAGG | + |
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Preference number: 6 (lower is better) Translates to: SFQIPGRTVKYA*YKRELKLGTYR Trigger: CCTGTAAGTACCGAGCTTTAGCTCTCTTTTGTATCATGCGTATTTCACAGTTCGACCTGGAATTTGAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000602358.5 ENST00000602523.1 ENST00000602524.1 |
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| CDS TCA 72 bp | TTATCTGACCTTATATTCAGTAGTGGTCTGGTCTTGTaGACTTGGACATCACAAATAGGACAATACTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LSDLIFSSGLVL*TWTSQIGQYLL Trigger: CAGCAAGTATTGTCCTATTTGTGATGTCCAAGTTCACAAGACCAGACCACTACTGAATATAAGGTCAGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000376663.8 ENST00000416820.5 ENST00000442508.5 ENST00000456675.2 ENST00000602358.5 |
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