RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BLVRB (Homo sapiens)

Ensembl gene IDs: ENSG00000090013

Ensembl transcript IDs: ENST00000263368.9, ENST00000595483.5, ENST00000597870.1, ENST00000601346.5, ENST00000643519.1, ENST00000643596.1

Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTaGAGTCGTGGGGGCACCTTGGTAGGGTCCCAGAGCAGGAAAGCT +
Preference number: 1 (lower is better)
Translates to: SRSTLCIRMWSSVTA*SRGGTLVGSQSRKA
Trigger: AGCTTTCCTGCTCTGGGACCCTACCAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR CCA 90 bp CACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCAGTCGTaGGGGCACCTTGGTAGGGTCCCAGAGCAGGAAAGCTGTAGTCCC +
Preference number: 1 (lower is better)
Translates to: HLVHPDVVISHSLQS*GHLGRVPEQESCSP
Trigger: GGGACTACAGCTTTCCTGCTCTGGGACCCTACCAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR CCA 90 bp ACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTGCATCCGGATGTaGTCATCAGTCACAGCCTGCAGTCGTGGGGGCACCTTGGTAGGG +
Preference number: 1 (lower is better)
Translates to: TYFRPDSRSTLCIRM*SSVTACSRGGTLVG
Trigger: CCCTACCAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR TCA 90 bp CTGGTCTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTaGTTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCAC +
Preference number: 1 (lower is better)
Translates to: LVSYVWRHHSHVLQA*FPQHLVHPDVVISH
Trigger: GTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR TCA 90 bp TCTGGATGTCAGTTTGATCATGGATCTGTTTACCACCTCTCTCTGTaGGCCTTGTGTGAGCAGGGCCCAGGGCTGTACAGGTCACCACTG +
Preference number: 1 (lower is better)
Translates to: SGCQFDHGSVYHLSL*ALCEQGPGLYRSPL
Trigger: CAGTGGTGACCTGTACAGCCCTGGGCCCTGCTCACACAAGGCTCACAGAGAGAGGTGGTAAACAGATCCATGATCAAACTGACATCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR TCA 90 bp ATTGTGGCCCTATCCCCTCTGCCTGCCTCCCGATCCCAGCTCCGATaGTCTGGATGTCAGTTTGATCATGGATCTGTTTACCACCTCTCT +
Preference number: 1 (lower is better)
Translates to: IVALSPLPASRSQLR*SGCQFDHGSVYHLS
Trigger: AGAGAGGTGGTAAACAGATCCATGATCAAACTGACATCCAGATCATCGGAGCTGGGATCGGGAGGCAGGCAGAGGGGATAGGGCCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR CAA 90 bp GGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTaGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCAGTCGTGGG +
Preference number: 2 (lower is better)
Translates to: GGITATYFRPDSRST*CIRMWSSVTACSRG
Trigger: CCCACGACTGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR-3UTR TCA 90 bp CTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTCTGTGAGCCTTGTGTaGGCAGGGCCCAGGGCTGTA +
Preference number: 2 (lower is better)
Translates to: LCVAASQPRTSGLIPAAPSVSLV*AGPRAV
Trigger: TACAGCCCTGGGCCCTGCTCACACAAGGCTCACAGA...AGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR-3UTR GCA 90 bp TGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCTACTGGCCAAGATCACGCCACTaGACTCCAGCCTGGGCATCA +
Preference number: 2 (lower is better)
Translates to: CSSCPRMPPSQMGTECYWPRSRH*TPAWAS
Trigger: TGATGCCCAGGCTGGAGTGCAGTGGCGTGATCTTGG...CCAGTAGCACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR-3UTR GCA 90 bp GTCACTGTGTACGCCCCAGTTAGTGGCTGGTCTCCTATGTGTGGCGGCATCACACCTCATGTCCCAGAATaGCACCCTCCCAGATGGGGA +
Preference number: 2 (lower is better)
Translates to: VTVYAPVSGWSPMCGGITPHVPE*HPPRWG
Trigger: TCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGG...TGTGATGCCGCCACACATAGGAGACCAGCCACTAACTGGGGCGTACACAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
3UTR-3UTR GCA 90 bp CACAGCTCTATCACTTCCTCTGGGAGGCCTACCCTGACCTCTCTCAGCCTAAGTCCTCATGTCCCAGAATaGCACCCTCCCAGATGGGGA +
Preference number: 2 (lower is better)
Translates to: HSSITSSGRPTLTSLSLSPHVPE*HPPRWG
Trigger: TCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGG...ACTTAGGCTGAGAGAGGTCAGGGTAGGCCTCCCAGAGGAAGTGATAGAGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR-3UTR GCA 90 bp TTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCTACTGATTGCCCCCTTCCTTTaGTCCTCATGTCCCAGAATG +
Preference number: 2 (lower is better)
Translates to: LLLMSQNATLPDGDRVLLIAPFL*SSCPRM
Trigger: CATTCTGGGACATGAGGAGCAAAGGAAGGGGGCAAT...CAGTAGCACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
3UTR CAA 90 bp CTCTGCCTGCCTCCCGATCCCAGCTCCGATGATCTGGATGTCAGTTaGATCATGGATCTGTTTACCACCTCTCTCTGTGAGCCTTGTGTG +
Preference number: 2 (lower is better)
Translates to: LCLPPDPSSDDLDVS*IMDLFTTSLCEPCV
Trigger: CACACAAGGCTCACAGAGAGAGGTGGTAAACAGATCCATGATCAAACTGACATCCAGATCATCGGAGCTGGGATCGGGAGGCAGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR CCA 72 bp AGGCCTGATTCCCGCAGCACCTTGTGCATCCGGATGTaGTCATCAGTCACAGCCTGCAGTCGTGGGGGCACC +
Preference number: 3 (lower is better)
Translates to: RPDSRSTLCIRM*SSVTACSRGGT
Trigger: GGTGCCCCCACGACTGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR GCA 72 bp ACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTaGAGTCGTGGGGGCACCTTGGTAGGGTCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: TLCIRMWSSVTA*SRGGTLVGSQS
Trigger: GCTCTGGGACCCTACCAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR TCA 72 bp TATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTaGTTCCCGCAGCACCTTGTGCATCCGGATGTGGTC +
Preference number: 3 (lower is better)
Translates to: YVWRHHSHVLQA*FPQHLVHPDVV
Trigger: GACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
3UTR-3UTR CAA 90 bp AATCACTTGAGGCAGGAGAACCACCTCCGGGAGGCGGAGGTTGCAGGGAGCCAATATTGCCCCCTTCCTTaGCTCCTCATGTCCCAGAAT +
Preference number: 3 (lower is better)
Translates to: NHLRQENHLREAEVAGSQYCPLP*LLMSQN
Trigger: ATTCTGGGACATGAGGAGCAAAGGAAGGGGGCAATA...TTGGCTCCCTGCAACCTCCGCCTCCCGGAGGTGGTTCTCCTGCCTCAAGTGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597870.1
3UTR TCA 72 bp CTATCCCCTCTGCCTGCCTCCCGATCCCAGCTCCGATaGTCTGGATGTCAGTTTGATCATGGATCTGTTTAC +
Preference number: 3 (lower is better)
Translates to: LSPLPASRSQLR*SGCQFDHGSVY
Trigger: GTAAACAGATCCATGATCAAACTGACATCCAGATCATCGGAGCTGGGATCGGGAGGCAGGCAGAGGGGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR TCA 90 bp AATCACTTGAGGCAGGAGAACCACCTCCGGGAGGCGGAGGTTGCAGGGAGCCAACGGCCGGGGCCCCTCTaGTGGCAGCCTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: NHLRQENHLREAEVAGSQRPGPL*WQPGGV
Trigger: GACTCCTCCAGGCTGCCATCAGAGGGGCCCCGGCCG...TTGGCTCCCTGCAACCTCCGCCTCCCGGAGGTGGTTCTCCTGCCTCAAGTGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp GAGGCAGGAGAACCACCTCCGGGAGGCGGAGGTTGCAGGGAGCCAAGATCACGCGTGGTGAGCCCGGTCTaGCCAGTGGCGCCGAAGATC +
Preference number: 4 (lower is better)
Translates to: EAGEPPPGGGGCREPRSRVVSPV*PVAPKI
Trigger: GATCTTCGGCGCCACTGGCCAGACCGGGCTCACCAC...GCGTGATCTTGGCTCCCTGCAACCTCCGCCTCCCGGAGGTGGTTCTCCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR TCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTCCTGCGCCAGGGTGGTaGGCCCGGTCTGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSPAPGW*ARSGQW
Trigger: CCACTGGCCAGACCGGGCTCACCACCCTGGCGCAGG...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR TCA 90 bp TTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCTACTGCCTGCGCCAGGGTGGTaGGCCCGGTCTGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LLLMSQNATLPDGDRVLLPAPGW*ARSGQW
Trigger: CCACTGGCCAGACCGGGCTCACCACCCTGGCGCAGG...CAGTAGCACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR TCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCCTGCGCCAGGGTGGTaGGCCCGGTCTGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVPAPGW*ARSGQW
Trigger: CCACTGGCCAGACCGGGCTCACCACCCTGGCGCAGG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR TCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTCGGCCGGGGCCCCTCTaGTGGCAGCCTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSRPGPL*WQPGGV
Trigger: GACTCCTCCAGGCTGCCATCAGAGGGGCCCCGGCCG...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR TCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCGGCCGGGGCCCCTCTaGTGGCAGCCTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVRPGPL*WQPGGV
Trigger: GACTCCTCCAGGCTGCCATCAGAGGGGCCCCGGCCG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR TCA 90 bp CCAGTTAGTGGCTGGTCTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCGGCCGGGGCCCCTCTaGTGGCAGCCTGGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: PVSGWSPMCGGITATYFRRPGPL*WQPGGV
Trigger: GACTCCTCCAGGCTGCCATCAGAGGGGCCCCGGCCG...CCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAGACCAGCCACTAACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGAGTGGCTGTCACTGGTaGGCGGCGGCGGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVSGCHW*AAAAAG
Trigger: CCCTGCCGCCGCCGCCGCCCACCAGTGACAGCCACT...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643519.1
CDS-3UTR TCA 90 bp GAGGCAGGAGAACCACCTCCGGGAGGCGGAGGTTGCAGGGAGCCAAGATCACGCGGCAGGAGAATCACTTaGGGCAGGAGAACCACCTCC +
Preference number: 4 (lower is better)
Translates to: EAGEPPPGGGGCREPRSRGRRIT*GRRTTS
Trigger: GGAGGTGGTTCTCCTGCCTCAAGTGATTCTCCTGCC...GCGTGATCTTGGCTCCCTGCAACCTCCGCCTCCCGGAGGTGGTTCTCCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR GCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTCCTGCTTGCACCGCCTaGGCCAGGGTGGTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSPACTA*ARVVSP
Trigger: CGGGCTCACCACCCTGGCGCAGGCGGTGCAAGCAGG...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp GAGGCAGGAGAACCACCTCCGGGAGGCGGAGGTTGCAGGGAGCCAAGATCACGCATGAGCCTTCATGGCTaGCACAATGTTCCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: EAGEPPPGGGGCREPRSRMSLHG*HNVPGA
Trigger: GGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCAT...GCGTGATCTTGGCTCCCTGCAACCTCCGCCTCCCGGAGGTGGTTCTCCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR GCA 90 bp AATCACTTGAGGCAGGAGAACCACCTCCGGGAGGCGGAGGTTGCAGGGAGCCAACCGGGAGGCGGAGGTTaGAGGGAGCCAAGATCACGC +
Preference number: 4 (lower is better)
Translates to: NHLRQENHLREAEVAGSQPGGGG*REPRSR
Trigger: GCGTGATCTTGGCTCCCTGCAACCTCCGCCTCCCGG...TTGGCTCCCTGCAACCTCCGCCTCCCGGAGGTGGTTCTCCTGCCTCAAGTGATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTTCTCCCACTACCACGTaGGCCGGCCGGGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSSPTTT*AGRGPS
Trigger: AGAGGGGCCCCGGCCGGCCCACGTGGTAGTGGGAGA...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTCTCCCACTACCACGTaGGCCGGCCGGGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVSPTTT*AGRGPS
Trigger: AGAGGGGCCCCGGCCGGCCCACGTGGTAGTGGGAGA...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp GTCACTGTGTACGCCCCAGTTAGTGGCTGGTCTCCTATGTGTGGCGGCATCACATCTCCCACTACCACGTaGGCCGGCCGGGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VTVYAPVSGWSPMCGGITSPTTT*AGRGPS
Trigger: AGAGGGGCCCCGGCCGGCCCACGTGGTAGTGGGAGA...TGTGATGCCGCCACACATAGGAGACCAGCCACTAACTGGGGCGTACACAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGGAGAGTGGCTGTCACTaGTGGGCGGCGGCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVESGCH*WAAAAA
Trigger: TGCCGCCGCCGCCGCCCACCAGTGACAGCCACTCTC...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643519.1
CDS-3UTR GCA 90 bp CTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCATGGCCCTATCCCCTCTaGCTGCCTCCCGATCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLCVAASQPRTSGLIPAAWPYPL*LPPDPS
Trigger: GCTGGGATCGGGAGGCAGGCAGAGGGGATAGGGCCA...TGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp CTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTGTGGTGAGCCCGGTCTaGCCAGTGGCGCCGAAGATC +
Preference number: 4 (lower is better)
Translates to: LCVAASQPRTSGLIPAAPVVSPV*PVAPKI
Trigger: GATCTTCGGCGCCACTGGCCAGACCGGGCTCACCAC...AGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp GAGGCAGGAGAACCACCTCCGGGAGGCGGAGGTTGCAGGGAGCCAAGATCACGCCACCATGAGCCTTCATaGCTGCCACAATGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: EAGEPPPGGGGCREPRSRHHEPS*LPQCSG
Trigger: CCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTG...GCGTGATCTTGGCTCCCTGCAACCTCCGCCTCCCGGAGGTGGTTCTCCTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR TCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTTGCCCAGCAGCACGATaGCAGCGTCCTGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSCPAAR*QRPAQP
Trigger: TGGCTGGGCAGGACGCTGTCATCGTGCTGCTGGGCA...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR TCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTGCCCAGCAGCACGATaGCAGCGTCCTGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVCPAAR*QRPAQP
Trigger: TGGCTGGGCAGGACGCTGTCATCGTGCTGCTGGGCA...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR TCA 90 bp GTTAGTGGCTGGTCTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTTGCCCAGCAGCACGATaGCAGCGTCCTGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VSGWSPMCGGITATYFRPCPAAR*QRPAQP
Trigger: TGGCTGGGCAGGACGCTGTCATCGTGCTGCTGGGCA...AGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAGACCAGCCACTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp GGCTGGTCTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCACCACCCACCCGAGGTaGAGGCCACGACCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GWSPMCGGITATYFRPDSTTHPR*RPRPCP
Trigger: TGGACAAGGTCGTGGCCTGCACCTCGGGTGGGTGGT...GGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAGACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGGCCCGGTCTGGCCAGTaGCGCCGAAGATCGCGATCT +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVARSGQ*RRRSRS
Trigger: AGATCGCGATCTTCGGCGCCACTGGCCAGACCGGGC...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCCCGGTCTGGCCAGTaGCGCCGAAGATCGCGATCT +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSARSGQ*RRRSRS
Trigger: AGATCGCGATCTTCGGCGCCACTGGCCAGACCGGGC...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGGTGGTGAGCCCGGTCTaGCCAGTGGCGCCGAAGATC +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVVVSPV*PVAPKI
Trigger: GATCTTCGGCGCCACTGGCCAGACCGGGCTCACCAC...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTGGTGAGCCCGGTCTaGCCAGTGGCGCCGAAGATC +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSVVSPV*PVAPKI
Trigger: GATCTTCGGCGCCACTGGCCAGACCGGGCTCACCAC...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTCCTCTGATGGCAGCCTaGAGGAGTCCCGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LCVAASQPRTSGLIPAAPPLMAA*RSPAPA
Trigger: TGCTGGTGCGGGACTCCTCCAGGCTGCCATCAGAGG...AGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CCTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCCACAGCCTGCAGTCGTaGGGGCACCTTGGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: PDSRSTLCIRMWSSVTACHSLQS*GHLGRV
Trigger: GACCCTACCAAGGTGCCCCCACGACTGCAGGCTGTG...GCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp CTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTCACAGCCTGCAGTCGTaGGGGCACCTTGGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: LCVAASQPRTSGLIPAAPHSLQS*GHLGRV
Trigger: GACCCTACCAAGGTGCCCCCACGACTGCAGGCTGTG...AGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCCCCAGTTAGTGGCTaGTCTCCCGAGGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSAPVSG*SPEVQA
Trigger: GGCCTGCACCTCGGGAGACCAGCCACTAACTGGGGC...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595483.5
CDS-3UTR TCA 90 bp GGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTGCATCCGGTTTGGAGATGACCCTTaGGGGCCCTCGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: GITATYFRPDSRSTLCIRFGDDP*GPSSIQ
Trigger: CTGGATGGACGAGGGCCCTCAAGGGTCATCTCCAAA...CCGGATGCACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR TCA 90 bp TTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCAGTCGTCTGTGAGCCTTGTGTaGGCAGGGCCCAGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: FPQHLVHPDVVISHSLQSSVSLV*AGPRAV
Trigger: TACAGCCCTGGGCCCTGCTCACACAAGGCTCACAGA...CGACTGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR GCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTACGGGATCGTGGGGGTaGAAGGCCTCAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSTGSWG*KASESR
Trigger: CCGAGACTCTGAGGCCTTGCACCCCCACGATCCCGT...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGACGGGATCGTGGGGGTaGAAGGCCTCAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVTGSWG*KASESR
Trigger: CCGAGACTCTGAGGCCTTGCACCCCCACGATCCCGT...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCAACGGGATCGTGGGGGTaGAAGGCCTCAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LIPAAPCASGCGHQSQPATGSWG*KASESR
Trigger: CCGAGACTCTGAGGCCTTGCACCCCCACGATCCCGT...TGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR GCA 90 bp TTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCACGGGATCGTGGGGGTaGAAGGCCTCAGAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: FLCSSCPRMPPSQMGTECTGSWG*KASESR
Trigger: CCGAGACTCTGAGGCCTTGCACCCCCACGATCCCGT...GCACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp GGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTGCATCCGGTCATCAGTCACAGCCTaGAGTCGTGGGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: GITATYFRPDSRSTLCIRSSVTA*SRGGTL
Trigger: CAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGA...CCGGATGCACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CCTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCCATCGTACGGGATCGTaGGGGTGCAAGGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PDSRSTLCIRMWSSVTACHRTGS*GCKASE
Trigger: CTCTGAGGCCTTGCACCCCCACGATCCCGTACGATG...GCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCCTCTGATGGCAGCCTaGAGGAGTCCCGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVPLMAA*RSPAPA
Trigger: TGCTGGTGCGGGACTCCTCCAGGCTGCCATCAGAGG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTCCTCTGATGGCAGCCTaGAGGAGTCCCGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSPLMAA*RSPAPA
Trigger: TGCTGGTGCGGGACTCCTCCAGGCTGCCATCAGAGG...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCACAGCCTGCAGTCGTaGGGGCACCTTGGTAGGGTC +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVHSLQS*GHLGRV
Trigger: GACCCTACCAAGGTGCCCCCACGACTGCAGGCTGTG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp TGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTGCCCCAGTTAGTGGCTaGTCTCCTATGTGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: CVAASQPRTSGLIPAAPCAPVSG*SPMCGG
Trigger: GCCGCCACACATAGGAGACCAGCCACTAACTGGGGC...ACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGAGAGGGGACAGAGAGTaGCTGTCACTGGTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVRGDRE*LSLVGG
Trigger: GCCGCCCACCAGTGACAGCCACTCTCTGTCCCCTCT...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643519.1
CDS-3UTR TCA 90 bp CTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCATTTGGAGATGACCCTTaGGGGCCCTCGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: LLCVAASQPRTSGLIPAAFGDDP*GPSSIQ
Trigger: CTGGATGGACGAGGGCCCTCAAGGGTCATCTCCAAA...TGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp TCCAGGGTCACTGTGTACGCCCCAGTTAGTGGCTGGTCTCCTATGTGTGGCGGCCTTGTCCACATCGGCTaGCTGCAGAACATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SRVTVYAPVSGWSPMCGGLVHIG*LQNISH
Trigger: GTGGGAGATGTTCTGCAGGCAGCCGATGTGGACAAG...GCCGCCACACATAGGAGACCAGCCACTAACTGGGGCGTACACAGTGACCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGACGATGACAGCGTCCTaGCCAGCCACGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVTMTAS*PATVLS
Trigger: GGACAAGACCGTGGCTGGGCAGGACGCTGTCATCGT...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp GTCACTGTGTACGCCCCAGTTAGTGGCTGGTCTCCTATGTGTGGCGGCATCACAACGATGACAGCGTCCTaGCCAGCCACGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VTVYAPVSGWSPMCGGITTMTAS*PATVLS
Trigger: GGACAAGACCGTGGCTGGGCAGGACGCTGTCATCGT...TGTGATGCCGCCACACATAGGAGACCAGCCACTAACTGGGGCGTACACAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp GGCTGGTCTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCATGAGCCTTCATGGCTaGCACAATGTTCCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: GWSPMCGGITATYFRPDSMSLHG*HNVPGA
Trigger: GGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCAT...GGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAGACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCAGGAAAGCCGAGGTaGAGGCCACGACCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSAGKPR*RPRPCP
Trigger: TGGACAAGGTCGTGGCCTGCACCTCGGCTTTCCTGC...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263368.9
CDS-3UTR GCA 90 bp TGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTTCATCAGTCACAGCCTaGAGTCGTGGGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: CVAASQPRTSGLIPAAPCSSVTA*SRGGTL
Trigger: CAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGA...ACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp GGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTGCATCCGGTCCCGCAGCACCTTGTaGATCCGGATGTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: GITATYFRPDSRSTLCIRSRSTL*IRMWSS
Trigger: TGATGACCACATCCGGATGCACAAGGTGCTGCGGGA...CCGGATGCACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CCTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCGGTGGGAGGGGTAGGTaGTGTGTCCGTCGTACTCAT +
Preference number: 4 (lower is better)
Translates to: PDSRSTLCIRMWSSVTACGGRGR*CVRRTH
Trigger: ATGAGTACGACGGACACAGCACCTACCCCTCCCACC...GCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR GCA 90 bp CTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTGGTGGGAGGGGTAGGTaGTGTGTCCGTCGTACTCAT +
Preference number: 4 (lower is better)
Translates to: LCVAASQPRTSGLIPAAPGGRGR*CVRRTH
Trigger: ATGAGTACGACGGACACAGCACCTACCCCTCCCACC...AGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp GGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTGCATCCGGCAGATGGGGACAGAGTaGTACTGGTACTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GITATYFRPDSRSTLCIRQMGTE*YWYWWE
Trigger: CTCCCACCAGTACCAGTAGCACTCTGTCCCCATCTG...CCGGATGCACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp TGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCTACTGGCCTCATGTCCCAGAATaGCACCCTCCCAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: CSSCPRMPPSQMGTECYWPHVPE*HPPRWG
Trigger: TCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGG...CCAGTAGCACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTCATCGTACGGGATCGTaGGGGTGCAAGGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSHRTGS*GCKASE
Trigger: CTCTGAGGCCTTGCACCCCCACGATCCCGTACGATG...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCATCGTACGGGATCGTaGGGGTGCAAGGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVHRTGS*GCKASE
Trigger: CTCTGAGGCCTTGCACCCCCACGATCCCGTACGATG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CACAGCTCTATCACTTCCTCTGGGAGGCCTACCCTGACCTCTCTCAGCCTAAGTCCTCTGATGGCAGCCTaGAGGAGTCCCGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: HSSITSSGRPTLTSLSLSPLMAA*RSPAPA
Trigger: TGCTGGTGCGGGACTCCTCCAGGCTGCCATCAGAGG...ACTTAGGCTGAGAGAGGTCAGGGTAGGCCTCCCAGAGGAAGTGATAGAGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCCCCAGTTAGTGGCTaGTCTCCTATGTGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSAPVSG*SPMCGG
Trigger: GCCGCCACACATAGGAGACCAGCCACTAACTGGGGC...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp ATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCAGTCGCCCCAGTTAGTGGCTaGTCTCCTATGTGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: IPAAPCASGCGHQSQPAVAPVSG*SPMCGG
Trigger: GCCGCCACACATAGGAGACCAGCCACTAACTGGGGC...GACTGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp CCTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCGTAGTCCCAGCTACCTaGGAGGCAGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PDSRSTLCIRMWSSVTACVVPAT*EAEAGE
Trigger: TTCTCCTGCCTCTGCCTCCCAGGTAGCTGGGACTAC...GCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR TCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTCACGTACTTCAGGCCTaGTTCCCGCAGCACCTTGTG +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSHVLQA*FPQHLV
Trigger: CACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTG...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR TCA 90 bp TATCCCCTCTGCCTGCCTCCCGATCCCAGCTCCGATGATCTGGATGTCAGTTTGCACGTACTTCAGGCCTaGTTCCCGCAGCACCTTGTG +
Preference number: 4 (lower is better)
Translates to: YPLCLPPDPSSDDLDVSLHVLQA*FPQHLV
Trigger: CACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTG...CAAACTGACATCCAGATCATCGGAGCTGGGATCGGGAGGCAGGCAGAGGGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR TCA 90 bp GTTAGTGGCTGGTCTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTCACGTACTTCAGGCCTaGTTCCCGCAGCACCTTGTG +
Preference number: 4 (lower is better)
Translates to: VSGWSPMCGGITATYFRPHVLQA*FPQHLV
Trigger: CACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTG...AGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAGACCAGCCACTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR TCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTTTTGGAGATGACCCTTaGGGGCCCTCGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSFGDDP*GPSSIQ
Trigger: CTGGATGGACGAGGGCCCTCAAGGGTCATCTCCAAA...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR TCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTTTGGAGATGACCCTTaGGGGCCCTCGTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVFGDDP*GPSSIQ
Trigger: CTGGATGGACGAGGGCCCTCAAGGGTCATCTCCAAA...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR TCA 90 bp CTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTAGCTTGTCCACACCATaGGCCTTCATGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LCVAASQPRTSGLIPAAPSLSTP*AFMAAT
Trigger: TGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGCT...AGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643596.1
CDS-3UTR GCA 90 bp CCTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCTCCACATCGGCTGCCTaGAGAACATCTCCCACTACC +
Preference number: 4 (lower is better)
Translates to: PDSRSTLCIRMWSSVTACSTSAA*RTSPTT
Trigger: GGTAGTGGGAGATGTTCTGCAGGCAGCCGATGTGGA...GCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR GCA 90 bp TGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTCTTGTCCACATCGGCTaGCTGCAGAACATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: CVAASQPRTSGLIPAAPCLVHIG*LQNISH
Trigger: GTGGGAGATGTTCTGCAGGCAGCCGATGTGGACAAG...ACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CACAGCTCTATCACTTCCTCTGGGAGGCCTACCCTGACCTCTCTCAGCCTAAGTACGATGACAGCGTCCTaGCCAGCCACGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: HSSITSSGRPTLTSLSLSTMTAS*PATVLS
Trigger: GGACAAGACCGTGGCTGGGCAGGACGCTGTCATCGT...ACTTAGGCTGAGAGAGGTCAGGGTAGGCCTCCCAGAGGAAGTGATAGAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR GCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGATGAGCCTTCATGGCTaGCACAATGTTCCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVMSLHG*HNVPGA
Trigger: GGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCAT...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTATGAGCCTTCATGGCTaGCACAATGTTCCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSMSLHG*HNVPGA
Trigger: GGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCAT...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTTCATCAGTCACAGCCTaGAGTCGTGGGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSSSVTA*SRGGTL
Trigger: CAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGA...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTCATCAGTCACAGCCTaGAGTCGTGGGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVSSVTA*SRGGTL
Trigger: CAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGA...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGGGTGGGAGGGGTAGGTaGTGTGTCCGTCGTACTCAT +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVGGRGR*CVRRTH
Trigger: ATGAGTACGACGGACACAGCACCTACCCCTCCCACC...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGGTGGGAGGGGTAGGTaGTGTGTCCGTCGTACTCAT +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSGGRGR*CVRRTH
Trigger: ATGAGTACGACGGACACAGCACCTACCCCTCCCACC...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACAGATGGGGACAGAGTaGTACTGGTACTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLCVAASQPRTSGLIPAAQMGTE*YWYWWE
Trigger: CTCCCACCAGTACCAGTAGCACTCTGTCCCCATCTG...TGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCCTCATGTCCCAGAATaGCACCCTCCCAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVPHVPE*HPPRWG
Trigger: TCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTCCTCATGTCCCAGAATaGCACCCTCCCAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSPHVPE*HPPRWG
Trigger: TCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGG...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CCAGTTAGTGGCTGGTCTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTCATGTCCCAGAATaGCACCCTCCCAGATGGGGA +
Preference number: 4 (lower is better)
Translates to: PVSGWSPMCGGITATYFRPHVPE*HPPRWG
Trigger: TCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGG...CCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAGACCAGCCACTAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCACCAAGATCACGCCACTaGACTCCAGCCTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: LIPAAPCASGCGHQSQPAPRSRH*TPAWAS
Trigger: TGATGCCCAGGCTGGAGTGCAGTGGCGTGATCTTGG...TGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp GGCTGGTCTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCACCATGAGCCTTCATaGCTGCCACAATGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GWSPMCGGITATYFRPDSHHEPS*LPQCSG
Trigger: CCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTG...GGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAGACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp TCCAGGGTCACTGTGTACGCCCCAGTTAGTGGCTGGTCTCCTATGTGTGGCGGCTTGTGCATCCGGATGTaGTCATCAGTCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SRVTVYAPVSGWSPMCGGLCIRM*SSVTAC
Trigger: GCAGGCTGTGACTGATGACCACATCCGGATGCACAA...GCCGCCACACATAGGAGACCAGCCACTAACTGGGGCGTACACAGTGACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp GGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTGCATCCGGTTGTGCATCCGGATGTaGTCATCAGTCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GITATYFRPDSRSTLCIRLCIRM*SSVTAC
Trigger: GCAGGCTGTGACTGATGACCACATCCGGATGCACAA...CCGGATGCACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACTGGTCTCCTATGTGTaGCGGCATCACAGCCACGTA +
Preference number: 4 (lower is better)
Translates to: LLCVAASQPRTSGLIPAALVSYV*RHHSHV
Trigger: TACGTGGCTGTGATGCCGCCACACATAGGAGACCAG...TGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTTGCCACCCTCCCAGATaGGGACAGAGTGCTACTGGT +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSCHPPR*GQSATG
Trigger: ACCAGTAGCACTCTGTCCCCATCTGGGAGGGTGGCA...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTGCCACCCTCCCAGATaGGGACAGAGTGCTACTGGT +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVCHPPR*GQSATG
Trigger: ACCAGTAGCACTCTGTCCCCATCTGGGAGGGTGGCA...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp GTCACTGTGTACGCCCCAGTTAGTGGCTGGTCTCCTATGTGTGGCGGCATCACATGCCACCCTCCCAGATaGGGACAGAGTGCTACTGGT +
Preference number: 4 (lower is better)
Translates to: VTVYAPVSGWSPMCGGITCHPPR*GQSATG
Trigger: ACCAGTAGCACTCTGTCCCCATCTGGGAGGGTGGCA...TGTGATGCCGCCACACATAGGAGACCAGCCACTAACTGGGGCGTACACAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
3UTR CAA 72 bp ACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTaGTGCATCCGGATGTGGTCATCAGTCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TATYFRPDSRST*CIRMWSSVTAC
Trigger: GCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR TCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTAGATCGCGATCTTCTTaGCGGCCATCGTACGGGATC +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSRSRSS*RPSYGI
Trigger: GATCCCGTACGATGGCCGTCAAGAAGATCGCGATCT...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR TCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGAGATCGCGATCTTCTTaGCGGCCATCGTACGGGATC +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVRSRSS*RPSYGI
Trigger: GATCCCGTACGATGGCCGTCAAGAAGATCGCGATCT...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR TCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTACCTTGTCCACACCATaGGCCTTCATGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSTLSTP*AFMAAT
Trigger: TGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGT...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
CDS-3UTR TCA 90 bp CTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCAACCTTGTCCACACCATaGGCCTTCATGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LIPAAPCASGCGHQSQPATLSTP*AFMAAT
Trigger: TGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGT...TGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR TCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGAGCTTGTCCACACCATaGGCCTTCATGGCTGCCACA +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVSLSTP*AFMAAT
Trigger: TGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGCT...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTTCCACATCGGCTGCCTaGAGAACATCTCCCACTACC +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSSTSAA*RTSPTT
Trigger: GGTAGTGGGAGATGTTCTGCAGGCAGCCGATGTGGA...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTCCACATCGGCTGCCTaGAGAACATCTCCCACTACC +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVSTSAA*RTSPTT
Trigger: GGTAGTGGGAGATGTTCTGCAGGCAGCCGATGTGGA...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCTTGTCCACATCGGCTaGCTGCAGAACATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVLVHIG*LQNISH
Trigger: GTGGGAGATGTTCTGCAGGCAGCCGATGTGGACAAG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTCTTGTCCACATCGGCTaGCTGCAGAACATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSLVHIG*LQNISH
Trigger: GTGGGAGATGTTCTGCAGGCAGCCGATGTGGACAAG...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTTCCCGCAGCACCTTGTaGATCCGGATGTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSSRSTL*IRMWSS
Trigger: TGATGACCACATCCGGATGCACAAGGTGCTGCGGGA...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTCCCGCAGCACCTTGTaGATCCGGATGTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVSRSTL*IRMWSS
Trigger: TGATGACCACATCCGGATGCACAAGGTGCTGCGGGA...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCAGATGGGGACAGAGTaGTACTGGTACTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVQMGTE*YWYWWE
Trigger: CTCCCACCAGTACCAGTAGCACTCTGTCCCCATCTG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCACCATGAGCCTTCATaGCTGCCACAATGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVHHEPS*LPQCSG
Trigger: CCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTCACCATGAGCCTTCATaGCTGCCACAATGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSHHEPS*LPQCSG
Trigger: CCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTG...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCTGGTCTCCTATGTGTaGCGGCATCACAGCCACGTA +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVLVSYV*RHHSHV
Trigger: TACGTGGCTGTGATGCCGCCACACATAGGAGACCAG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCACTGGTCTCCTATGTGTaGCGGCATCACAGCCACGTA +
Preference number: 4 (lower is better)
Translates to: LIPAAPCASGCGHQSQPALVSYV*RHHSHV
Trigger: TACGTGGCTGTGATGCCGCCACACATAGGAGACCAG...TGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTCTGGTCTCCTATGTGTaGCGGCATCACAGCCACGTA +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSLVSYV*RHHSHV
Trigger: TACGTGGCTGTGATGCCGCCACACATAGGAGACCAG...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CCA 90 bp ACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCATGCCACCCTCCCAGATaGGGACAGAGTGCTACTGGT +
Preference number: 4 (lower is better)
Translates to: TYFRPDSRSTLCIRMWSSCHPPR*GQSATG
Trigger: ACCAGTAGCACTCTGTCCCCATCTGGGAGGGTGGCA...TGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCGGACATCACTGTCGTaGGACCTTAGAGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVRTSLS*DLRGDR
Trigger: TCTGTCCCCTCTAAGGTCCCACGACAGTGATGTCCG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643519.1
CDS-3UTR CCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCTCTATCACTTCCTCTaGGAGGCCTACCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVLYHFL*EAYPDL
Trigger: GAGGTCAGGGTAGGCCTCCCAGAGGAAGTGATAGAG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR GCA 90 bp GTGTCTATCCACAGCTCTATCACTTCCTCTGGGAGGCCTACCCTGACCTCTCTCTCCCGCAGCACCTTGTaGATCCGGATGTGGTCATCA +
Preference number: 4 (lower is better)
Translates to: VSIHSSITSSGRPTLTSLSRSTL*IRMWSS
Trigger: TGATGACCACATCCGGATGCACAAGGTGCTGCGGGA...GAGAGAGGTCAGGGTAGGCCTCCCAGAGGAAGTGATAGAGCTGTGGATAGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTTTGTGCATCCGGATGTaGTCATCAGTCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSLCIRM*SSVTAC
Trigger: GCAGGCTGTGACTGATGACCACATCCGGATGCACAA...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTATTGCCCCCTTCCTTTaGTCCTCATGTCCCAGAATG +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSIAPFL*SSCPRM
Trigger: CATTCTGGGACATGAGGAGCAAAGGAAGGGGGCAAT...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGATTGCCCCCTTCCTTTaGTCCTCATGTCCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVIAPFL*SSCPRM
Trigger: CATTCTGGGACATGAGGAGCAAAGGAAGGGGGCAAT...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCAATTGCCCCCTTCCTTTaGTCCTCATGTCCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LIPAAPCASGCGHQSQPAIAPFL*SSCPRM
Trigger: CATTCTGGGACATGAGGAGCAAAGGAAGGGGGCAAT...TGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR GCA 90 bp TTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCATTGCCCCCTTCCTTTaGTCCTCATGTCCCAGAATG +
Preference number: 4 (lower is better)
Translates to: FLCSSCPRMPPSQMGTECIAPFL*SSCPRM
Trigger: CATTCTGGGACATGAGGAGCAAAGGAAGGGGGCAAT...GCACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTGGCTCAACATTTATTaGCCCCTTCCTTTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVWLNIY*PLPLLL
Trigger: GAGGAGCAAAGGAAGGGGGCAATAAATGTTGAGCCA...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTTGGCTCAACATTTATTaGCCCCTTCCTTTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSWLNIY*PLPLLL
Trigger: GAGGAGCAAAGGAAGGGGGCAATAAATGTTGAGCCA...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000643519.1
ENST00000643596.1
CDS-3UTR GCA 90 bp TCCAGGGTCACTGTGTACGCCCCAGTTAGTGGCTGGTCTCCTATGTGTGGCGGCCTGGTGTTCAGTAAATaGACAGTAACATGGAATGGC +
Preference number: 4 (lower is better)
Translates to: SRVTVYAPVSGWSPMCGGLVFSK*TVTWNG
Trigger: GCCATTCCATGTTACTGTGCATTTACTGAACACCAG...GCCGCCACACATAGGAGACCAGCCACTAACTGGGGCGTACACAGTGACCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR GCA 90 bp GGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTGCATCCGGTACAGGGCAACTATTTaGTTAATGTCTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GITATYFRPDSRSTLCIRYRATI*LMSVSP
Trigger: TGGGGACACAGACATTAAGCAAATAGTTGCCCTGTA...CCGGATGCACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp TGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCTACTGGAAATGCACAGTAACATaGAATGGCTTCAGCGTCACC +
Preference number: 4 (lower is better)
Translates to: CSSCPRMPPSQMGTECYWKCTVT*NGFSVT
Trigger: GGTGACGCTGAAGCCATTCCATGTTACTGTGCATTT...CCAGTAGCACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CCA 90 bp CTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCACACAGTAACATGGAATaGCTTCAGCGTCACCTTTCA +
Preference number: 4 (lower is better)
Translates to: LIPAAPCASGCGHQSQPAHSNME*LQRHLS
Trigger: TGAAAGGTGACGCTGAAGCCATTCCATGTTACTGTG...TGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR TCA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTTTCTCTAGAGTAATTTaGAGCTCTTGGCTCAACATT +
Preference number: 4 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSFSRVI*SSWLNI
Trigger: AATGTTGAGCCAAGAGCTTCAAATTACTCTAGAGAA...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000643519.1
CDS-3UTR TCA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTTCTCTAGAGTAATTTaGAGCTCTTGGCTCAACATT +
Preference number: 4 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVFSRVI*SSWLNI
Trigger: AATGTTGAGCCAAGAGCTTCAAATTACTCTAGAGAA...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000643519.1
CDS GCA 90 bp CACGATGACAGCGTCCTGCCCAGCCACGGTCTTGTCCACATCGGCTaGCTGCAGAACATCTCCCACTACCACGTGGGCCGGCCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: HDDSVLPSHGLVHIG*LQNISHYHVGRPGP
Trigger: GGGCCCCGGCCGGCCCACGTGGTAGTGGGAGATGTTCTGCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCAGGACGCTGTCATCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS GCA 90 bp ATGACAGCGTCCTGCCCAGCCACGGTCTTGTCCACATCGGCTGCCTaGAGAACATCTCCCACTACCACGTGGGCCGGCCGGGGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: MTASCPATVLSTSAA*RTSPTTTWAGRGPS
Trigger: AGAGGGGCCCCGGCCGGCCCACGTGGTAGTGGGAGATGTTCTGCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCAGGACGCTGTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS CCA 90 bp CTCCCACTACCACGTGGGCCGGCCGGGGCCCCTCTGATGGCAGCCTaGAGGAGTCCCGCACCAGCACTGTCACTTCGTAACCTGCTTGCA +
Preference number: 5 (lower is better)
Translates to: LPLPRGPAGAPLMAA*RSPAPALSLRNLLA
Trigger: TGCAAGCAGGTTACGAAGTGACAGTGCTGGTGCGGGACTCCTCCAGGCTGCCATCAGAGGGGCCCCGGCCGGCCCACGTGGTAGTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS TCA 90 bp CTGCAGAACATCTCCCACTACCACGTGGGCCGGCCGGGGCCCCTCTaGTGGCAGCCTGGAGGAGTCCCGCACCAGCACTGTCACTTCGTA +
Preference number: 5 (lower is better)
Translates to: LQNISHYHVGRPGPL*WQPGGVPHQHCHFV
Trigger: TACGAAGTGACAGTGCTGGTGCGGGACTCCTCCAGGCTGCCATCAGAGGGGCCCCGGCCGGCCCACGTGGTAGTGGGAGATGTTCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS CCA 90 bp GGCGCCGAAGATCGCGATCTTCTTGACGGCCATCGTACGGGATCGTaGGGGTGCAAGGCCTCAGAGTCTCGGCACGCGCGGGAACCCACT +
Preference number: 5 (lower is better)
Translates to: GAEDRDLLDGHRTGS*GCKASESRHAREPT
Trigger: AGTGGGTTCCCGCGCGTGCCGAGACTCTGAGGCCTTGCACCCCCACGATCCCGTACGATGGCCGTCAAGAAGATCGCGATCTTCGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CAA 90 bp GAGGCAGGAGAACCACCTCCGGGAGGCGGAGGTTGCAGGGAGCCAAGATCACGCCACTTCGTAACCTGCTaGCACCGCCTGCGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: EAGEPPPGGGGCREPRSRHFVTC*HRLRQG
Trigger: ACCCTGGCGCAGGCGGTGCAAGCAGGTTACGAAGTG...GCGTGATCTTGGCTCCCTGCAACCTCCGCCTCCCGGAGGTGGTTCTCCTGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS TCA 90 bp TCCCACCACCCACCCGAGGTGCAGGCCACGACCTTGTCCACACCATaGGCCTTCATGGCTGCCACAATGTTCCGGGCGCCCTCGGACATC +
Preference number: 5 (lower is better)
Translates to: SHHPPEVQATTLSTP*AFMAATMFRAPSDI
Trigger: GATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCACCTCGGGTGGGTGGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS GCA 90 bp GAAGATCGCGATCTTCTTGACGGCCATCGTACGGGATCGTGGGGGTaGAAGGCCTCAGAGTCTCGGCACGCGCGGGAACCCACTGGCTGC +
Preference number: 5 (lower is better)
Translates to: EDRDLLDGHRTGSWG*KASESRHAREPTGC
Trigger: GCAGCCAGTGGGTTCCCGCGCGTGCCGAGACTCTGAGGCCTTGCACCCCCACGATCCCGTACGATGGCCGTCAAGAAGATCGCGATCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643519.1
ENST00000643596.1
CDS TCA 90 bp AGTGGCTGGTCTCCCGAGGTGCAGGCCACGACCTTGTCCACACCATaGGCCTTCATGGCTGCCACAATGTTCCGGGCGCCCTCGGACATC +
Preference number: 5 (lower is better)
Translates to: SGWSPEVQATTLSTP*AFMAATMFRAPSDI
Trigger: GATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCACCTCGGGAGACCAGCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595483.5
CDS GCA 90 bp CGAGGTGCAGGCCACGACCTTGTCCACACCATGAGCCTTCATGGCTaGCACAATGTTCCGGGCGCCCTCGGACATCACTGTCGTGGGACC +
Preference number: 5 (lower is better)
Translates to: RGAGHDLVHTMSLHG*HNVPGALGHHCRGT
Trigger: GGTCCCACGACAGTGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCACCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601346.5
CDS CCA 90 bp TCATGGCTGCCACAATGTTCCGGGCGCCCTCGGACATCACTGTCGTaGGACCTTAGAGGGGACAGAGAGTGGCTGTCACTGGTGGGCGGC +
Preference number: 5 (lower is better)
Translates to: SWLPQCSGRPRTSLS*DLRGDREWLSLVGG
Trigger: GCCGCCCACCAGTGACAGCCACTCTCTGTCCCCTCTAAGGTCCCACGACAGTGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601346.5
ENST00000643519.1
CDS CCA 90 bp CTCCCGAGGTGCAGGCCACGACCTTGTCCACACCATGAGCCTTCATaGCTGCCACAATGTTCCGGGCGCCCTCGGACATCACTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: LPRCRPRPCPHHEPS*LPQCSGRPRTSLSW
Trigger: CCACGACAGTGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCACCTCGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595483.5
CDS CCA 90 bp CACCCGAGGTGCAGGCCACGACCTTGTCCACACCATGAGCCTTCATaGCTGCCACAATGTTCCGGGCGCCCTCGGACATCACTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: HPRCRPRPCPHHEPS*LPQCSGRPRTSLSW
Trigger: CCACGACAGTGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCACCTCGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CAA 90 bp AATCACTTGAGGCAGGAGAACCACCTCCGGGAGGCGGAGGTTGCAGGGAGCCAATCCGGGAGGCGGAGGTaGCAGGGAGCCAAGATCACG +
Preference number: 5 (lower is better)
Translates to: NHLRQENHLREAEVAGSQSGRRR*QGAKIT
Trigger: CGTGATCTTGGCTCCCTGCAACCTCCGCCTCCCGGA...TTGGCTCCCTGCAACCTCCGCCTCCCGGAGGTGGTTCTCCTGCCTCAAGTGATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS TCA 90 bp CAGAGCAGGAAAGCCGAGGTGCAGGCCACGACCTTGTCCACACCATaGGCCTTCATGGCTGCCACAATGTTCCGGGCGCCCTCGGACATC +
Preference number: 5 (lower is better)
Translates to: QSRKAEVQATTLSTP*AFMAATMFRAPSDI
Trigger: GATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCACCTCGGCTTTCCTGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263368.9
ENST00000601346.5
CDS GCA 90 bp GGACTGAGGTCATTGCGGGTGCCCAGCAGCACGATGACAGCGTCCTaGCCAGCCACGGTCTTGTCCACATCGGCTGCCTGCAGAACATCT +
Preference number: 5 (lower is better)
Translates to: GLRSLRVPSSTMTAS*PATVLSTSAACRTS
Trigger: AGATGTTCTGCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCAGGACGCTGTCATCGTGCTGCTGGGCACCCGCAATGACCTCAGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643596.1
CDS GCA 90 bp CGAGGTGCAGGCCACGACCTTGTCCACACCATGAGCCTTCATGGCTaGCACAATGTTCCGGGCGCCCTCGGACATCACTGTCGTGGGACT +
Preference number: 5 (lower is better)
Translates to: RGAGHDLVHTMSLHG*HNVPGALGHHCRGT
Trigger: AGTCCCACGACAGTGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCACCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
CDS GCA 90 bp TCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTaGAGTCGTGGGGGCACCTTGGTAGGGTCCCAGAGCAGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: SRSTLCIRMWSSVTA*SRGGTLVGSQSRKA
Trigger: GGCTTTCCTGCTCTGGGACCCTACCAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263368.9
ENST00000601346.5
CDS CCA 90 bp AAGCCGAGGTGCAGGCCACGACCTTGTCCACACCATGAGCCTTCATaGCTGCCACAATGTTCCGGGCGCCCTCGGACATCACTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: KPRCRPRPCPHHEPS*LPQCSGRPRTSLSW
Trigger: CCACGACAGTGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCACCTCGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263368.9
ENST00000601346.5
CDS-3UTR CAA 90 bp TGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTTGCCCAGCCACGGTCTaGTCCACATCGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: CVAASQPRTSGLIPAAPCCPATV*STSAAC
Trigger: GCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCA...ACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CAA 90 bp CTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCAGTGGGACTGAGGTCATaGCGGGTGCCCAGCAGCACG +
Preference number: 5 (lower is better)
Translates to: LLCVAASQPRTSGLIPAAVGLRS*RVPSST
Trigger: CGTGCTGCTGGGCACCCGCAATGACCTCAGTCCCAC...TGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CAA 90 bp TGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTAGTCGTGGGGGCACCTaGGTAGGGTCCCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: CVAASQPRTSGLIPAAPCSRGGT*VGSQSR
Trigger: CCTGCTCTGGGACCCTACCAAGGTGCCCCCACGACT...ACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS GCA 90 bp GTACTGAGGTCATTGCGGGTGCCCAGCAGCACGATGACAGCGTCCTaGCCAGCCACGGTCTTGTCCACATCGGCTGCCTGCAGAACATCT +
Preference number: 5 (lower is better)
Translates to: VLRSLRVPSSTMTAS*PATVLSTSAACRTS
Trigger: AGATGTTCTGCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCAGGACGCTGTCATCGTGCTGCTGGGCACCCGCAATGACCTCAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643519.1
CDS GCA 90 bp GGTCCCAGAGCAGGAAAGCTTGTCCACACCATGAGCCTTCATGGCTaGCACAATGTTCCGGGCGCCCTCGGACATCACTGTCGTGGGACC +
Preference number: 5 (lower is better)
Translates to: GPRAGKLVHTMSLHG*HNVPGALGHHCRGT
Trigger: GGTCCCACGACAGTGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGCTTTCCTGCTCTGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643519.1
CDS CCA 90 bp CACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCAGTCGTaGGGGCACCTTGGTAGGGTCCCAGAGCAGGAAAGCCGAGGTGCA +
Preference number: 5 (lower is better)
Translates to: HLVHPDVVISHSLQS*GHLGRVPEQESRGA
Trigger: TGCACCTCGGCTTTCCTGCTCTGGGACCCTACCAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263368.9
ENST00000601346.5
CDS-3UTR CAA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTTGCCCAGCCACGGTCTaGTCCACATCGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSCPATV*STSAAC
Trigger: GCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCA...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CAA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTGCCCAGCCACGGTCTaGTCCACATCGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVCPATV*STSAAC
Trigger: GCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCA...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CAA 90 bp CCAGTTAGTGGCTGGTCTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGTGCCCAGCCACGGTCTaGTCCACATCGGCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PVSGWSPMCGGITATYFRCPATV*STSAAC
Trigger: GCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCA...CCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAGACCAGCCACTAACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CAA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGGTGGGACTGAGGTCATaGCGGGTGCCCAGCAGCACG +
Preference number: 5 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVVGLRS*RVPSST
Trigger: CGTGCTGCTGGGCACCCGCAATGACCTCAGTCCCAC...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CAA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTAGTCGTGGGGGCACCTaGGTAGGGTCCCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSSRGGT*VGSQSR
Trigger: CCTGCTCTGGGACCCTACCAAGGTGCCCCCACGACT...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CAA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGAGTCGTGGGGGCACCTaGGTAGGGTCCCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVSRGGT*VGSQSR
Trigger: CCTGCTCTGGGACCCTACCAAGGTGCCCCCACGACT...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS GCA 90 bp GGTCCCAGAGCAGGAAAGCTTGTCCACACCATGAGCCTTCATGGCTaGCACAATGTTCCGGGCGCCCTCGGACATCACTGTCGTGGGACT +
Preference number: 5 (lower is better)
Translates to: GPRAGKLVHTMSLHG*HNVPGALGHHCRGT
Trigger: AGTCCCACGACAGTGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGCTTTCCTGCTCTGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643596.1
CDS CCA 90 bp GTAGGGTCCCAGAGCAGGAAAGCTTGTCCACACCATGAGCCTTCATaGCTGCCACAATGTTCCGGGCGCCCTCGGACATCACTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: VGSQSRKACPHHEPS*LPQCSGRPRTSLSW
Trigger: CCACGACAGTGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGCTTTCCTGCTCTGGGACCCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CAA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCACTTCGTAACCTGCTaGCACCGCCTGCGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVHFVTC*HRLRQG
Trigger: ACCCTGGCGCAGGCGGTGCAAGCAGGTTACGAAGTG...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CAA 90 bp GTGTCTATCCACAGCTCTATCACTTCCTCTGGGAGGCCTACCCTGACCTCTCTCGTGGGACTGAGGTCATaGCGGGTGCCCAGCAGCACG +
Preference number: 5 (lower is better)
Translates to: VSIHSSITSSGRPTLTSLVGLRS*RVPSST
Trigger: CGTGCTGCTGGGCACCCGCAATGACCTCAGTCCCAC...GAGAGAGGTCAGGGTAGGCCTCCCAGAGGAAGTGATAGAGCTGTGGATAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CAA 90 bp CACAGCTCTATCACTTCCTCTGGGAGGCCTACCCTGACCTCTCTCAGCCTAAGTAGTCGTGGGGGCACCTaGGTAGGGTCCCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: HSSITSSGRPTLTSLSLSSRGGT*VGSQSR
Trigger: CCTGCTCTGGGACCCTACCAAGGTGCCCCCACGACT...ACTTAGGCTGAGAGAGGTCAGGGTAGGCCTCCCAGAGGAAGTGATAGAGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS CCA 90 bp CACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCAGTCGTaGGGGCACCTTGGTAGGGTCCCAGAGCAGGAAAGCTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: HLVHPDVVISHSLQS*GHLGRVPEQESLST
Trigger: TGTGGACAAGCTTTCCTGCTCTGGGACCCTACCAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CAA 90 bp CCTGATTCCCGCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCGATTCCCGCAGCACCTaGTGCATCCGGATGTGGTCA +
Preference number: 5 (lower is better)
Translates to: PDSRSTLCIRMWSSVTACDSRST*CIRMWS
Trigger: TGACCACATCCGGATGCACAAGGTGCTGCGGGAATC...GCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGCGGGAATCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CAA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTCAGTACTGAGGTCATaGCGGGTGCCCAGCAGCACG +
Preference number: 5 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVSVLRS*RVPSST
Trigger: CGTGCTGCTGGGCACCCGCAATGACCTCAGTACTGA...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643519.1
CDS-3UTR CAA 90 bp TCCAGGGTCACTGTGTACGCCCCAGTTAGTGGCTGGTCTCCTATGTGTGGCGGCAAGATCGCGATCTTCTaGACGGCCATCGTACGGGAT +
Preference number: 5 (lower is better)
Translates to: SRVTVYAPVSGWSPMCGGKIAIF*TAIVRD
Trigger: ATCCCGTACGATGGCCGTCAAGAAGATCGCGATCTT...GCCGCCACACATAGGAGACCAGCCACTAACTGGGGCGTACACAGTGACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CAA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGGATTCCCGCAGCACCTaGTGCATCCGGATGTGGTCA +
Preference number: 5 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVDSRST*CIRMWS
Trigger: TGACCACATCCGGATGCACAAGGTGCTGCGGGAATC...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CAA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGATTCCCGCAGCACCTaGTGCATCCGGATGTGGTCA +
Preference number: 5 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSDSRST*CIRMWS
Trigger: TGACCACATCCGGATGCACAAGGTGCTGCGGGAATC...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CAA 90 bp CCAGTTAGTGGCTGGTCTCCTATGTGTGGCGGCATCACAGCCACGTACTTCAGGGATTCCCGCAGCACCTaGTGCATCCGGATGTGGTCA +
Preference number: 5 (lower is better)
Translates to: PVSGWSPMCGGITATYFRDSRST*CIRMWS
Trigger: TGACCACATCCGGATGCACAAGGTGCTGCGGGAATC...CCTGAAGTACGTGGCTGTGATGCCGCCACACATAGGAGACCAGCCACTAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS-3UTR CAA 90 bp TGTGTGGCGGCATCACAGCCACGTACTTCAGGCCTGATTCCCGCAGCACCTTGTAGGCAGGAGAATCACTaGAGGCAGGAGAACCACCTC +
Preference number: 5 (lower is better)
Translates to: CVAASQPRTSGLIPAAPCRQENH*RQENHL
Trigger: GAGGTGGTTCTCCTGCCTCAAGTGATTCTCCTGCCT...ACAAGGTGCTGCGGGAATCAGGCCTGAAGTACGTGGCTGTGATGCCGCCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CAA 90 bp GCAGCACCTTGTGCATCCGGATGTGGTCATCAGTCACAGCCTGCAGTCGTGGGGTATTGCCCCCTTCCTTaGCTCCTCATGTCCCAGAAT +
Preference number: 5 (lower is better)
Translates to: AAPCASGCGHQSQPAVVGYCPLP*LLMSQN
Trigger: ATTCTGGGACATGAGGAGCAAAGGAAGGGGGCAATA...CCCCACGACTGCAGGCTGTGACTGATGACCACATCCGGATGCACAAGGTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CAA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGAAGATCGCGATCTTCTaGACGGCCATCGTACGGGAT +
Preference number: 5 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVKIAIF*TAIVRD
Trigger: ATCCCGTACGATGGCCGTCAAGAAGATCGCGATCTT...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CAA 90 bp TATCCCCTCTGCCTGCCTCCCGATCCCAGCTCCGATGATCTGGATGTCAGTTTGAAGATCGCGATCTTCTaGACGGCCATCGTACGGGAT +
Preference number: 5 (lower is better)
Translates to: YPLCLPPDPSSDDLDVSLKIAIF*TAIVRD
Trigger: ATCCCGTACGATGGCCGTCAAGAAGATCGCGATCTT...CAAACTGACATCCAGATCATCGGAGCTGGGATCGGGAGGCAGGCAGAGGGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS-3UTR CAA 90 bp CCTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTTATTGCCCCCTTCCTTaGCTCCTCATGTCCCAGAAT +
Preference number: 5 (lower is better)
Translates to: PSFAPHVPECHPPRWGQSYCPLP*LLMSQN
Trigger: ATTCTGGGACATGAGGAGCAAAGGAAGGGGGCAATA...ACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CAA 90 bp CTTCCTTTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGTATTGCCCCCTTCCTTaGCTCCTCATGTCCCAGAAT +
Preference number: 5 (lower is better)
Translates to: LPLLLMSQNATLPDGDRVYCPLP*LLMSQN
Trigger: ATTCTGGGACATGAGGAGCAAAGGAAGGGGGCAATA...CACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAAAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS-3UTR CAA 90 bp TTGCTCCTCATGTCCCAGAATGCCACCCTCCCAGATGGGGACAGAGTGCTACTGTATTGCCCCCTTCCTTaGCTCCTCATGTCCCAGAAT +
Preference number: 5 (lower is better)
Translates to: LLLMSQNATLPDGDRVLLYCPLP*LLMSQN
Trigger: ATTCTGGGACATGAGGAGCAAAGGAAGGGGGCAATA...CAGTAGCACTCTGTCCCCATCTGGGAGGGTGGCATTCTGGGACATGAGGAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597870.1
ENST00000643596.1
CDS TCA 72 bp ATCTCCCACTACCACGTGGGCCGGCCGGGGCCCCTCTaGTGGCAGCCTGGAGGAGTCCCGCACCAGCACTGT +
Preference number: 6 (lower is better)
Translates to: ISHYHVGRPGPL*WQPGGVPHQHC
Trigger: ACAGTGCTGGTGCGGGACTCCTCCAGGCTGCCATCAGAGGGGCCCCGGCCGGCCCACGTGGTAGTGGGAGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS TCA 72 bp CTTCGTAACCTGCTTGCACCGCCTGCGCCAGGGTGGTaGGCCCGGTCTGGCCAGTGGCGCCGAAGATCGCGA +
Preference number: 6 (lower is better)
Translates to: LRNLLAPPAPGW*ARSGQWRRRSR
Trigger: TCGCGATCTTCGGCGCCACTGGCCAGACCGGGCTCACCACCCTGGCGCAGGCGGTGCAAGCAGGTTACGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS CCA 72 bp GCTTGCACCGCCTGCGCCAGGGTGGTGAGCCCGGTCTaGCCAGTGGCGCCGAAGATCGCGATCTTCTTGACG +
Preference number: 6 (lower is better)
Translates to: ACTACARVVSPV*PVAPKIAIFLT
Trigger: CGTCAAGAAGATCGCGATCTTCGGCGCCACTGGCCAGACCGGGCTCACCACCCTGGCGCAGGCGGTGCAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS GCA 72 bp TCCTGCCCAGCCACGGTCTTGTCCACATCGGCTGCCTaGAGAACATCTCCCACTACCACGTGGGCCGGCCGG +
Preference number: 6 (lower is better)
Translates to: SCPATVLSTSAA*RTSPTTTWAGR
Trigger: CCGGCCGGCCCACGTGGTAGTGGGAGATGTTCTGCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS TCA 72 bp CGGTCTGGCCAGTGGCGCCGAAGATCGCGATCTTCTTaGCGGCCATCGTACGGGATCGTGGGGGTGCAAGGC +
Preference number: 6 (lower is better)
Translates to: RSGQWRRRSRSS*RPSYGIVGVQG
Trigger: GCCTTGCACCCCCACGATCCCGTACGATGGCCGTCAAGAAGATCGCGATCTTCGGCGCCACTGGCCAGACCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS TCA 72 bp CCACCCGAGGTGCAGGCCACGACCTTGTCCACACCATaGGCCTTCATGGCTGCCACAATGTTCCGGGCGCCC +
Preference number: 6 (lower is better)
Translates to: PPEVQATTLSTP*AFMAATMFRAP
Trigger: GGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCACCTCGGGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS GCA 72 bp GATCTTCTTGACGGCCATCGTACGGGATCGTGGGGGTaGAAGGCCTCAGAGTCTCGGCACGCGCGGGAACCC +
Preference number: 6 (lower is better)
Translates to: DLLDGHRTGSWG*KASESRHAREP
Trigger: GGGTTCCCGCGCGTGCCGAGACTCTGAGGCCTTGCACCCCCACGATCCCGTACGATGGCCGTCAAGAAGATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000643519.1
ENST00000643596.1
CDS GCA 72 bp AGCGTCCTGCCCAGCCACGGTCTTGTCCACATCGGCTaGCTGCAGAACATCTCCCACTACCACGTGGGCCGG +
Preference number: 6 (lower is better)
Translates to: SVLPSHGLVHIG*LQNISHYHVGR
Trigger: CCGGCCCACGTGGTAGTGGGAGATGTTCTGCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCAGGACGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS GCA 72 bp TCATTGCGGGTGCCCAGCAGCACGATGACAGCGTCCTaGCCAGCCACGGTCTTGTCCACATCGGCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: SLRVPSSTMTAS*PATVLSTSAAC
Trigger: GCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCAGGACGCTGTCATCGTGCTGCTGGGCACCCGCAATGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000601346.5
ENST00000643519.1
ENST00000643596.1
CDS CCA 72 bp GATCGCGATCTTCTTGACGGCCATCGTACGGGATCGTaGGGGTGCAAGGCCTCAGAGTCTCGGCACGCGCGG +
Preference number: 6 (lower is better)
Translates to: DRDLLDGHRTGS*GCKASESRHAR
Trigger: CCGCGCGTGCCGAGACTCTGAGGCCTTGCACCCCCACGATCCCGTACGATGGCCGTCAAGAAGATCGCGATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000643519.1
ENST00000643596.1
CDS CAA 72 bp CCGGTCTGGCCAGTGGCGCCGAAGATCGCGATCTTCTaGACGGCCATCGTACGGGATCGTGGGGGTGCAAGG +
Preference number: 6 (lower is better)
Translates to: PVWPVAPKIAIF*TAIVRDRGGAR
Trigger: CCTTGCACCCCCACGATCCCGTACGATGGCCGTCAAGAAGATCGCGATCTTCGGCGCCACTGGCCAGACCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS CAA 90 bp GTGGTGAGCCCGGTCTGGCCAGTGGCGCCGAAGATCGCGATCTTCTaGACGGCCATCGTACGGGATCGTGGGGGTGCAAGGCCTCAGAGT +
Preference number: 6 (lower is better)
Translates to: VVSPVWPVAPKIAIF*TAIVRDRGGARPQS
Trigger: ACTCTGAGGCCTTGCACCCCCACGATCCCGTACGATGGCCGTCAAGAAGATCGCGATCTTCGGCGCCACTGGCCAGACCGGGCTCACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS CAA 90 bp CGGGTGCCCAGCAGCACGATGACAGCGTCCTGCCCAGCCACGGTCTaGTCCACATCGGCTGCCTGCAGAACATCTCCCACTACCACGTGG +
Preference number: 6 (lower is better)
Translates to: RVPSSTMTASCPATV*STSAACRTSPTTTW
Trigger: CCACGTGGTAGTGGGAGATGTTCTGCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCAGGACGCTGTCATCGTGCTGCTGGGCACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS TCA 72 bp TCTCCCGAGGTGCAGGCCACGACCTTGTCCACACCATaGGCCTTCATGGCTGCCACAATGTTCCGGGCGCCC +
Preference number: 6 (lower is better)
Translates to: SPEVQATTLSTP*AFMAATMFRAP
Trigger: GGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCACCTCGGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595483.5
CDS GCA 72 bp CAGCCCCACCTCCATGATCCCACCACCCACCCGAGGTaGAGGCCACGACCTTGTCCACACCATGAGCCTTCA +
Preference number: 6 (lower is better)
Translates to: QPHLHDPTTHPR*RPRPCPHHEPS
Trigger: TGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCACCTCGGGTGGGTGGTGGGATCATGGAGGTGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597870.1
CDS CAA 90 bp ATCCGGATGTGGTCATCAGTCACAGCCTGCAGTCGTGGGGGCACCTaGGTAGGGTCCCAGAGCAGGAAAGCCGAGGTGCAGGCCACGACC +
Preference number: 6 (lower is better)
Translates to: IRMWSSVTACSRGGT*VGSQSRKAEVQATT
Trigger: GGTCGTGGCCTGCACCTCGGCTTTCCTGCTCTGGGACCCTACCAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGACCACATCCGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263368.9
ENST00000601346.5
CDS TCA 72 bp AAAGCCGAGGTGCAGGCCACGACCTTGTCCACACCATaGGCCTTCATGGCTGCCACAATGTTCCGGGCGCCC +
Preference number: 6 (lower is better)
Translates to: KAEVQATTLSTP*AFMAATMFRAP
Trigger: GGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCACCTCGGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263368.9
ENST00000601346.5
CDS CAA 72 bp TGGTCATCAGTCACAGCCTGCAGTCGTGGGGGCACCTaGGTAGGGTCCCAGAGCAGGAAAGCCGAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: WSSVTACSRGGT*VGSQSRKAEVQ
Trigger: CTGCACCTCGGCTTTCCTGCTCTGGGACCCTACCAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263368.9
ENST00000601346.5
CDS GCA 72 bp GGCCACGACCTTGTCCACACCATGAGCCTTCATGGCTaGCACAATGTTCCGGGCGCCCTCGGACATCACTGT +
Preference number: 6 (lower is better)
Translates to: GHDLVHTMSLHG*HNVPGALGHHC
Trigger: ACAGTGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000601346.5
CDS CCA 72 bp TGCAGGCCACGACCTTGTCCACACCATGAGCCTTCATaGCTGCCACAATGTTCCGGGCGCCCTCGGACATCA +
Preference number: 6 (lower is better)
Translates to: CRPRPCPHHEPS*LPQCSGRPRTS
Trigger: TGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGGTCGTGGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000601346.5
CDS CCA 72 bp CCACAATGTTCCGGGCGCCCTCGGACATCACTGTCGTaGGACCTTAGAGGGGACAGAGAGTGGCTGTCACTG +
Preference number: 6 (lower is better)
Translates to: PQCSGRPRTSLS*DLRGDREWLSL
Trigger: CAGTGACAGCCACTCTCTGTCCCCTCTAAGGTCCCACGACAGTGATGTCCGAGGGCGCCCGGAACATTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000601346.5
ENST00000643519.1
CDS CAA 72 bp AGCAGCACGATGACAGCGTCCTGCCCAGCCACGGTCTaGTCCACATCGGCTGCCTGCAGAACATCTCCCACT +
Preference number: 6 (lower is better)
Translates to: SSTMTASCPATV*STSAACRTSPT
Trigger: AGTGGGAGATGTTCTGCAGGCAGCCGATGTGGACAAGACCGTGGCTGGGCAGGACGCTGTCATCGTGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263368.9
ENST00000595483.5
ENST00000597870.1
ENST00000643519.1
ENST00000643596.1
CDS CAA 90 bp ATCCGGATGTGGTCATCAGTCACAGCCTGCAGTCGTGGGGGCACCTaGGTAGGGTCCCAGAGCAGGAAAGCTTGTCCACACCATGAGCCT +
Preference number: 6 (lower is better)
Translates to: IRMWSSVTACSRGGT*VGSQSRKACPHHEP
Trigger: AGGCTCATGGTGTGGACAAGCTTTCCTGCTCTGGGACCCTACCAAGGTGCCCCCACGACTGCAGGCTGTGACTGATGACCACATCCGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643519.1
ENST00000643596.1
CDS GCA 72 bp GCAGGAAAGCTTGTCCACACCATGAGCCTTCATGGCTaGCACAATGTTCCGGGCGCCCTCGGACATCACTGT +
Preference number: 6 (lower is better)
Translates to: AGKLVHTMSLHG*HNVPGALGHHC
Trigger: ACAGTGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGCTTTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643519.1
ENST00000643596.1
CDS CCA 72 bp CAGAGCAGGAAAGCTTGTCCACACCATGAGCCTTCATaGCTGCCACAATGTTCCGGGCGCCCTCGGACATCA +
Preference number: 6 (lower is better)
Translates to: QSRKACPHHEPS*LPQCSGRPRTS
Trigger: TGATGTCCGAGGGCGCCCGGAACATTGTGGCAGCCATGAAGGCTCATGGTGTGGACAAGCTTTCCTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643519.1
ENST00000643596.1