RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BLOC1S5 (Homo sapiens)

Ensembl gene IDs: ENSG00000188428

Ensembl transcript IDs: ENST00000244777.6, ENST00000397457.7, ENST00000475998.1, ENST00000543936.7, ENST00000627748.2

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAACGCTTCCCAAGAGGCAGCTCAAACACCAGCGTGGCCATCTTTaGCACAGCAGAGACAATGTGTTCACTCTCACCTCTCTGAAATGT +
Preference number: 1 (lower is better)
Translates to: ATLPKRQLKHQRGHL*HSRDNVFTLTSLKC
Trigger: ACATTTCAGAGAGGTGAGAGTGAACACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTGGTGTTTGAGCTGCCTCTTGGGAAGCGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR GCA 90 bp TTCCCATCCACGGAAGCCCATGGCATTATGCTGCACTGTAAAATATaGAACGCTTCCCAAGAGGCAGCTCAAACACCAGCGTGGCCATCT +
Preference number: 1 (lower is better)
Translates to: FPSTEAHGIMLHCKI*NASQEAAQTPAWPS
Trigger: AGATGGCCACGCTGGTGTTTGAGCTGCCTCTTGGGAAGCGTTGCATATTTTACAGTGCAGCATAATGCCATGGGCTTCCGTGGATGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR CCA 90 bp TGTAAAATATGCAACGCTTCCCAAGAGGCAGCTCAAACACCAGCGTaGCCATCTTTGCCACAGCAGAGACAATGTGTTCACTCTCACCTC +
Preference number: 1 (lower is better)
Translates to: CKICNASQEAAQTPA*PSLPQQRQCVHSHL
Trigger: GAGGTGAGAGTGAACACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTGGTGTTTGAGCTGCCTCTTGGGAAGCGTTGCATATTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR GCA 90 bp ATGGCTTTTCTGTGCTCTTCATCCACTTCAGCCCTTTTGTTGGGTTaGTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCA +
Preference number: 1 (lower is better)
Translates to: MAFLCSSSTSALLLG*SFMKLSHWSICCFS
Trigger: TGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGATGAAGAGCACAGAAAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
3UTR CCA 90 bp GTGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATaGTTCCAGAGGGACTCTCTGGCAGATTTTGTTGATTACTCATTA +
Preference number: 1 (lower is better)
Translates to: VWANTSGSFKARNFI*FQRDSLADFVDYSL
Trigger: TAATGAGTAATCAACAAAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR CCA 90 bp GATTTACATTTAACATGGACCATTTGCTGTGTGGGCAAACACTTCTaGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAGAGGGACTC +
Preference number: 1 (lower is better)
Translates to: DLHLTWTICCVGKHF*FIQSQELYMVPEGL
Trigger: GAGTCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACACAGCAAATGGTCCATGTTAAATGTAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR TCA 90 bp TGCAGGTTAAGAGTGAGCCTTAGTCAAATTTGGCACTCAGTTGTGTaGATGATCTTGGGCATGTTTGCTCGCTCAATTATTCATTTGACA +
Preference number: 1 (lower is better)
Translates to: CRLRVSLSQIWHSVV*MILGMFARSIIHLT
Trigger: TGTCAAATGAATAATTGAGCGAGCAAACATGCCCAAGATCATTCACACAACTGAGTGCCAAATTTGACTAAGGCTCACTCTTAACCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
3UTR CCA 90 bp CTTATGAGAACAGACATTAACACTAAAAAGGATTTACATTTAACATaGACCATTTGCTGTGTGGGCAAACACTTCTGGTTCATTCAAAGC +
Preference number: 1 (lower is better)
Translates to: LMRTDINTKKDLHLT*TICCVGKHFWFIQS
Trigger: GCTTTGAATGAACCAGAAGTGTTTGCCCACACAGCAAATGGTCCATGTTAAATGTAAATCCTTTTTAGTGTTAATGTCTGTTCTCATAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR CAA 90 bp TGCAACGCTTCCCAAGAGGCAGCTCAAACACCAGCGTGGCCATCTTaGCCACAGCAGAGACAATGTGTTCACTCTCACCTCTCTGAAATG +
Preference number: 2 (lower is better)
Translates to: CNASQEAAQTPAWPS*PQQRQCVHSHLSEM
Trigger: CATTTCAGAGAGGTGAGAGTGAACACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTGGTGTTTGAGCTGCCTCTTGGGAAGCGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR-3UTR TCA 90 bp TCAAACACCAGCGTGGCCATCTTTGCCACAGCAGAGACAATGTGTTCACTCTCATCACTCTCACCTCTCTaGAATGTGATCTCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: SNTSVAIFATAETMCSLSSLSPL*NVISAP
Trigger: TGGAGCAGAGATCACATTTCAGAGAGGTGAGAGTGA...TGAGAGTGAACACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTGGTGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
3UTR-3UTR CCA 90 bp ATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGGCTGCTTGCAATCTCTaGAGAACCTGGCTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: ILLSLKQRLNGLVGIVFRAACNL*RTWLRL
Trigger: CAGCCTCAGCCAGGTTCTCCAGAGATTGCAAGCAGC...CCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627748.2
3UTR CAA 90 bp TCTTCATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTaGTCCCACTGGAGCATATGCTGTTTCTCACTAGCTACTAAGTGG +
Preference number: 2 (lower is better)
Translates to: SSSTSALLLGCSFMK*SHWSICCFSLATKW
Trigger: CCACTTAGTAGCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGATGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
3UTR-3UTR CCA 90 bp AACACTTTATACATCCTTCCAACAGCCAAGGAGGCTATGACAGGTAGCTTCTATAATCTCTGGAGAACCTaGCTGAGGCTGTCCCGCATT +
Preference number: 2 (lower is better)
Translates to: NTLYILPTAKEAMTGSFYNLWRT*LRLSRI
Trigger: AATGCGGGACAGCCTCAGCCAGGTTCTCCAGAGATT...ATAGAAGCTACCTGTCATAGCCTCCTTGGCTGTTGGAAGGATGTATAAAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627748.2
3UTR-3UTR TCA 90 bp GCCACTGAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATTTGGAGTCTACAGACTaGGTCATTAGCTGCTTGCAT +
Preference number: 2 (lower is better)
Translates to: ATEYIAKLEAEAKRSGGNLESTD*VISCLH
Trigger: ATGCAAGCAGCTAATGACTCAGTCTGTAGACTCCAA...ATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTCAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
3UTR-3UTR TCA 90 bp ATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGAGTTGACAAATGTTTACTaGGCATGTGCTTTGTGCCAG +
Preference number: 2 (lower is better)
Translates to: IAKLEAEAKRSGGNSFQELTNVY*ACALCQ
Trigger: CTGGCACAAAGCACATGCTCAGTAAACATTTGTCAA...CTCCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244777.6
3UTR-3UTR TCA 90 bp GGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAGAGGGATGGCACTCAGTTGTGTaGATGATCTTGGGCATGTTT +
Preference number: 2 (lower is better)
Translates to: GKHFWFIQSQELYMVPEGWHSVV*MILGMF
Trigger: AAACATGCCCAAGATCATTCACACAACTGAGTGCCA...TCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
3UTR-3UTR TCA 90 bp CTTTCTTCTGATATAAGAGTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGTGGGTTGCTCCTTCATaGAGTTGTCCCACTGGAGCA +
Preference number: 2 (lower is better)
Translates to: LSSDIRVPLNILLSLKQRWVAPS*SCPTGA
Trigger: TGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCA...CCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCACTCTTATATCAGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
3UTR-3UTR TCA 90 bp TCAAACACCAGCGTGGCCATCTTTGCCACAGCAGAGACAATGTGTTCACTCTCAGAAACTTCTTTCTTCTaGTATAAGAGTGCCACTGAA +
Preference number: 2 (lower is better)
Translates to: SNTSVAIFATAETMCSLSETSFF*YKSATE
Trigger: TTCAGTGGCACTCTTATATCAGAAGAAAGAAGTTTC...TGAGAGTGAACACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTGGTGTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
3UTR-3UTR TCA 90 bp ATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTAGCTACTAAGTGGTCATTGGAGTCTACAGACTaGGTCATTAGCTGCTTGCAA +
Preference number: 2 (lower is better)
Translates to: MKLSHWSICCFSLATKWSLESTD*VISCLQ
Trigger: TTGCAAGCAGCTAATGACTCAGTCTGTAGACTCCAA...TGACCACTTAGTAGCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627748.2
3UTR-3UTR GCA 90 bp TTCATTCAAAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGCAGATTTCTGAAATGTGATCTCTaGTCCAAGGACAGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: FIQSQELYMVPEGLSGRFLKCDL*SKDSWL
Trigger: AAGCCAGCTGTCCTTGGAGCAGAGATCACATTTCAG...AAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR-3UTR TCA 90 bp GTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGACTTCTCATTAGTTTGTaGTTGTTGTGGTTCAAGTTC +
Preference number: 2 (lower is better)
Translates to: VPLNILLSLKQRLNGLVGLLISL*LLWFKF
Trigger: GAACTTGAACCACAACAATCACAAACTAATGAGAAG...TCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
3UTR-3UTR GCA 90 bp ATTCGTTCAATGATGTGTTGGCAATTAATCGCATTCCAAAAAGTGTCTACGGTACAGCGTGGCCATCTTTaGCACAGCAGAGACAATGTG +
Preference number: 2 (lower is better)
Translates to: IRSMMCWQLIAFQKVSTVQRGHL*HSRDNV
Trigger: CACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTG...TACCGTAGACACTTTTTGGAATGCGATTAATTGCCAACACATCATTGAACGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397457.7
3UTR-3UTR GCA 90 bp AAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGCAGATTTTGTTGATTCTGCACTGTAAAATATaGAACGCTTCCCAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: KPGTLYGSRGTLWQILLILHCKI*NASQEA
Trigger: TGCCTCTTGGGAAGCGTTGCATATTTTACAGTGCAG...AATCAACAAAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR-3UTR GCA 90 bp GTGGGAATAGTTTTCAGGAGAGAGGTGAACATCTTCTCATTAGTTTGTGATTGTGCCCTTTTGTTGGGTTaGTCCTTCATGAAGTTGTCC +
Preference number: 2 (lower is better)
Translates to: VGIVFRREVNIFSLVCDCALLLG*SFMKLS
Trigger: GGACAACTTCATGAAGGAGCAACCCAACAAAAGGGC...ACAATCACAAACTAATGAGAAGATGTTCACCTCTCTCCTGAAAACTATTCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
3UTR CAA 90 bp CTTCTTTCTTCTGATATAAGAGTGCCACTGAATATATTGCTAAGCTaGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGAGA +
Preference number: 2 (lower is better)
Translates to: LLSSDIRVPLNILLS*KQRLNGLVGIVFRR
Trigger: TCTCCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCACTCTTATATCAGAAGAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
3UTR-3UTR CCA 90 bp AAGAATGAAGCTTTGACAGTAAGCCATACATTTACACAGGCAGGCATTGTCAATGTGGGCAAACACTTCTaGTTCATTCAAAGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: KNEALTVSHTFTQAGIVNVGKHF*FIQSQE
Trigger: TTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCAC...ATTGACAATGCCTGCCTGTGTAAATGTATGGCTTACTGTCAAAGCTTCATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR-3UTR CCA 90 bp CTGTGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAAAGCTGGAAAAATGTaGCACCCTTCTTTAAATATC +
Preference number: 2 (lower is better)
Translates to: LCGQTLLVHSKPGTLYGSKAGKM*HPSLNI
Trigger: GATATTTAAAGAAGGGTGCCACATTTTTCCAGCTTT...GGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR CAA 90 bp GGCTGTCCCGCATTGTGTCTCTACATTTGGGAAGAGTATGTTCATTaGTTTCATGGATCATGTTCTTCAAATTTTCAAGAACTCGCATTT +
Preference number: 2 (lower is better)
Translates to: GCPALCLYIWEEYVH*FHGSCSSNFQELAF
Trigger: AAATGCGAGTTCTTGAAAATTTGAAGAACATGATCCATGAAACAAATGAACATACTCTTCCCAAATGTAGAGACACAATGCGGGACAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627748.2
3UTR CAA 90 bp CACACAATCTTAATTTCTTGGTTACAGCATTCGTTCAATGATGTGTaGGCAATTAATCGCATTCCAAAAAGTGTCTACGGTACAAAGGGA +
Preference number: 2 (lower is better)
Translates to: HTILISWLQHSFNDV*AINRIPKSVYGTKG
Trigger: TCCCTTTGTACCGTAGACACTTTTTGGAATGCGATTAATTGCCAACACATCATTGAACGAATGCTGTAACCAAGAAATTAAGATTGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397457.7
3UTR-3UTR GCA 90 bp TGGCAATTAATCGCATTCCAAAAAGTGTCTACGGTACAAAGGGAATTTTCATTTCCCATGGCATTATGCTaGACTGTAAAATATGCAACG +
Preference number: 2 (lower is better)
Translates to: WQLIAFQKVSTVQREFSFPMALC*TVKYAT
Trigger: CGTTGCATATTTTACAGTGCAGCATAATGCCATGGG...AAATGAAAATTCCCTTTGTACCGTAGACACTTTTTGGAATGCGATTAATTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397457.7
3UTR-3UTR CCA 90 bp AAGAATGAAGCTTTGACAGTAAGCCATACATTTACACAGGCAGGCATTGTCAATCGTTCAATGATGTGTTaGCAATTAATCGCATTCCAA +
Preference number: 2 (lower is better)
Translates to: KNEALTVSHTFTQAGIVNRSMMC*QLIAFQ
Trigger: TTGGAATGCGATTAATTGCCAACACATCATTGAACG...ATTGACAATGCCTGCCTGTGTAAATGTATGGCTTACTGTCAAAGCTTCATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397457.7
3UTR GCA 72 bp CCCAAGAGGCAGCTCAAACACCAGCGTGGCCATCTTTaGCACAGCAGAGACAATGTGTTCACTCTCACCTCT +
Preference number: 3 (lower is better)
Translates to: PKRQLKHQRGHL*HSRDNVFTLTS
Trigger: AGAGGTGAGAGTGAACACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTGGTGTTTGAGCTGCCTCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
3UTR CCA 72 bp TGCAACGCTTCCCAAGAGGCAGCTCAAACACCAGCGTaGCCATCTTTGCCACAGCAGAGACAATGTGTTCAC +
Preference number: 3 (lower is better)
Translates to: CNASQEAAQTPA*PSLPQQRQCVH
Trigger: GTGAACACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTGGTGTTTGAGCTGCCTCTTGGGAAGCGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR GCA 72 bp GTGTCTTCCCATCCACGGAAGCCCATGGCATTATGCTaGACTGTAAAATATGCAACGCTTCCCAAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: VSSHPRKPMALC*TVKYATLPKRQ
Trigger: CTGCCTCTTGGGAAGCGTTGCATATTTTACAGTGCAGCATAATGCCATGGGCTTCCGTGGATGGGAAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR TCA 72 bp GCCACAGCAGAGACAATGTGTTCACTCTCACCTCTCTaGAATGTGATCTCTGCTCCAAGGACAGCTGGCTTT +
Preference number: 3 (lower is better)
Translates to: ATAETMCSLSPL*NVISAPRTAGF
Trigger: AAAGCCAGCTGTCCTTGGAGCAGAGATCACATTTCAGAGAGGTGAGAGTGAACACATTGTCTCTGCTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
3UTR GCA 72 bp CTGTGCTCTTCATCCACTTCAGCCCTTTTGTTGGGTTaGTCCTTCATGAAGTTGTCCCACTGGAGCATATGC +
Preference number: 3 (lower is better)
Translates to: LCSSSTSALLLG*SFMKLSHWSIC
Trigger: GCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGATGAAGAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
3UTR GCA 72 bp CATGTGTCTTCCCATCCACGGAAGCCCATGGCATTATaGTGCACTGTAAAATATGCAACGCTTCCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: HVSSHPRKPMAL*CTVKYATLPKR
Trigger: CCTCTTGGGAAGCGTTGCATATTTTACAGTGCAGCATAATGCCATGGGCTTCCGTGGATGGGAAGACACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR CCA 72 bp ACTGAGTCATTAGCTGCTTGCAATCTCTGGAGAACCTaGCTGAGGCTGTCCCGCATTGTGTCTCTACATTTG +
Preference number: 3 (lower is better)
Translates to: TESLAACNLWRT*LRLSRIVSLHL
Trigger: CAAATGTAGAGACACAATGCGGGACAGCCTCAGCCAGGTTCTCCAGAGATTGCAAGCAGCTAATGACTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627748.2
3UTR TCA 72 bp CATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATaGAGTTGTCCCACTGGAGCATATGCTGTTTCTCAC +
Preference number: 3 (lower is better)
Translates to: HPLQPFCWVAPS*SCPTGAYAVSH
Trigger: GTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
3UTR-3UTR CAA 90 bp ATCCTTCCAACAGCCAAGGAGGCTATGACAGGTAGCTTCTATACCTTCCCATTATGCTCCTTCATGAAGTaGTCCCACTGGAGCATATGC +
Preference number: 3 (lower is better)
Translates to: ILPTAKEAMTGSFYTFPLCSFMK*SHWSIC
Trigger: GCATATGCTCCAGTGGGACAACTTCATGAAGGAGCA...TAATGGGAAGGTATAGAAGCTACCTGTCATAGCCTCCTTGGCTGTTGGAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
3UTR-3UTR CAA 90 bp TGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAGATCCACTTCAGCCCTTTaGTTGGGTTGCTCCTTCATG +
Preference number: 3 (lower is better)
Translates to: CGQTLLVHSKPGTLYGSRSTSAL*LGCSFM
Trigger: CATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGA...TCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
3UTR CCA 72 bp CTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTaGAGCATATGCTGTTTCTCACTAGCTACTAAGTGG +
Preference number: 3 (lower is better)
Translates to: LLLGCSFMKLSH*SICCFSLATKW
Trigger: CCACTTAGTAGCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
3UTR-3UTR CAA 90 bp CTGTGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCGTGCCACTGAATATATaGCTAAGCTTGAAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: LCGQTLLVHSKPGTLYGSVPLNI*LSLKQR
Trigger: CCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCAC...GGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR-3UTR CAA 90 bp ATTGATGAGCCTGTCAAGCCTACAGTAGCGGATAGAGAAAGTTGGCAGAAGTTCTTTAACATGGACCATTaGCTGTGTGGGCAAACACTT +
Preference number: 3 (lower is better)
Translates to: IDEPVKPTVADRESWQKFFNMDH*LCGQTL
Trigger: AAGTGTTTGCCCACACAGCAAATGGTCCATGTTAAA...GAACTTCTGCCAACTTTCTCTATCCGCTACTGTAGGCTTGACAGGCTCATCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397457.7
3UTR-3UTR CAA 90 bp CTTTCTTCTGATATAAGAGTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGTGCTCCTTCATGAAGTaGTCCCACTGGAGCATATGC +
Preference number: 3 (lower is better)
Translates to: LSSDIRVPLNILLSLKQRCSFMK*SHWSIC
Trigger: GCATATGCTCCAGTGGGACAACTTCATGAAGGAGCA...CCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCACTCTTATATCAGAAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
3UTR TCA 72 bp CAGGCAGGCATTGTCAATTTTCTGCAGTCGCCACACTaGGATAACACAAGAGAGCTGGATATTTTCTTTCTT +
Preference number: 3 (lower is better)
Translates to: QAGIVNFLQSPH*DNTRELDIFFL
Trigger: AAGAAAGAAAATATCCAGCTCTCTTGTGTTATCTCAGTGTGGCGACTGCAGAAAATTGACAATGCCTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR TCA 72 bp AGAGTGAGCCTTAGTCAAATTTGGCACTCAGTTGTGTaGATGATCTTGGGCATGTTTGCTCGCTCAATTATT +
Preference number: 3 (lower is better)
Translates to: RVSLSQIWHSVV*MILGMFARSII
Trigger: AATAATTGAGCGAGCAAACATGCCCAAGATCATTCACACAACTGAGTGCCAAATTTGACTAAGGCTCACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
3UTR CCA 72 bp AACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATaGTTCCAGAGGGACTCTCTGGCAGATTTTGTTGAT +
Preference number: 3 (lower is better)
Translates to: NTSGSFKARNFI*FQRDSLADFVD
Trigger: ATCAACAAAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR CCA 72 bp TTAACATGGACCATTTGCTGTGTGGGCAAACACTTCTaGTTCATTCAAAGCCAGGAACTTTATATGGTTCCA +
Preference number: 3 (lower is better)
Translates to: LTWTICCVGKHF*FIQSQELYMVP
Trigger: TGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACACAGCAAATGGTCCATGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR-3UTR CAA 90 bp AACACTTTATACATCCTTCCAACAGCCAAGGAGGCTATGACAGGTAGCTTCTATCTCCATCTCAGCATATaGTTCTTTAAGCCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: NTLYILPTAKEAMTGSFYLHLSI*FFKPFH
Trigger: ATGGAAAGGCTTAAAGAACAATATGCTGAGATGGAG...ATAGAAGCTACCTGTCATAGCCTCCTTGGCTGTTGGAAGGATGTATAAAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
3UTR-3UTR CAA 90 bp CTGTGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCCAAGTTCTTAAAAGGTaGAAAATTTCGCTAGGTCCT +
Preference number: 3 (lower is better)
Translates to: LCGQTLLVHSKPGTLYGSQVLKR*KISLGP
Trigger: AGGACCTAGCGAAATTTTCAACCTTTTAAGAACTTG...GGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244777.6
3UTR TCA 72 bp TTAACTTTAATCACATTTTCAACATGCAGCCAAGAATaGAGCTTTGACAGTAAGCCATACATTTACACAGGC +
Preference number: 3 (lower is better)
Translates to: LTLITFSTCSQE*SFDSKPYIYTG
Trigger: GCCTGTGTAAATGTATGGCTTACTGTCAAAGCTTCATTCTTGGCTGCATGTTGAAAATGTGATTAAAGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR GCA 90 bp GCCACTGAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATGGGAGTCCCTCTTCTTaGTGCCACCGCCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: ATEYIAKLEAEAKRSGGNGSPSS*CHRPGR
Trigger: CCGCCCCGGGCGGTGGCAGCAAGAAGAGGGACTCCC...ATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR GCA 90 bp TTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCAGGGAGTCCCTCTTCTTaGTGCCACCGCCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LLGCSFMKLSHWSICCFSGSPSS*CHRPGR
Trigger: CCGCCCCGGGCGGTGGCAGCAAGAAGAGGGACTCCC...TGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR GCA 90 bp GGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAGAGGGAGGGAGTCCCTCTTCTTaGTGCCACCGCCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: GKHFWFIQSQELYMVPEGGSPSS*CHRPGR
Trigger: CCGCCCCGGGCGGTGGCAGCAAGAAGAGGGACTCCC...TCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR TCA 90 bp TTCCCATCCACGGAAGCCCATGGCATTATGCTGCACTGTAAAATATGCAACGCTGATAATGAGGTGCGCTaGGCCCGCAGTCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FPSTEAHGIMLHCKICNADNEVR*ARSPQG
Trigger: TCCCTGGGGACTGCGGGCTCAGCGCACCTCATTATC...AGCGTTGCATATTTTACAGTGCAGCATAATGCCATGGGCTTCCGTGGATGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR TCA 90 bp GGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTAGCTGATAATGAGGTGCGCTaGGCCCGCAGTCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GCSFMKLSHWSICCFSLADNEVR*ARSPQG
Trigger: TCCCTGGGGACTGCGGGCTCAGCGCACCTCATTATC...AGCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
3UTR CAA 72 bp TCCCAAGAGGCAGCTCAAACACCAGCGTGGCCATCTTaGCCACAGCAGAGACAATGTGTTCACTCTCACCTC +
Preference number: 4 (lower is better)
Translates to: SQEAAQTPAWPS*PQQRQCVHSHL
Trigger: GAGGTGAGAGTGAACACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTGGTGTTTGAGCTGCCTCTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR TCA 90 bp TTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCGATAATGAGGTGCGCTaGGCCCGCAGTCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: FVGLLLHEVVPLEHMLFLDNEVR*ARSPQG
Trigger: TCCCTGGGGACTGCGGGCTCAGCGCACCTCATTATC...GAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR GCA 90 bp AAATATGCAACGCTTCCCAAGAGGCAGCTCAAACACCAGCGTGGCCATCTTTGCTCACCCAAGCTGGAGTaGAGTGGTGCCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KYATLPKRQLKHQRGHLCSPKLE*SGAISA
Trigger: AGCTGAGATGGCACCACTGCACTCCAGCTTGGGTGA...GCAAAGATGGCCACGCTGGTGTTTGAGCTGCCTCTTGGGAAGCGTTGCATATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR TCA 90 bp GTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTTCTGGAGAACCTGGCTaGGGCTGTCCCGCATTGTGT +
Preference number: 4 (lower is better)
Translates to: VGLLLHEVVPLEHMLFLTSGEPG*GCPALC
Trigger: ACACAATGCGGGACAGCCTCAGCCAGGTTCTCCAGA...AGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR GCA 90 bp TTCCCATCCACGGAAGCCCATGGCATTATGCTGCACTGTAAAATATGCAACGCTTCCTTGATAATGAGGTaGGCTGAGCCCGCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: FPSTEAHGIMLHCKICNASLIMR*AEPAVP
Trigger: GGGGACTGCGGGCTCAGCGCACCTCATTATCAAGGA...AGCGTTGCATATTTTACAGTGCAGCATAATGCCATGGGCTTCCGTGGATGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR TCA 90 bp CACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATTGGGTTGCTCCTTCATaGAGTTGTCCCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: HFSPFVGLLLHEVVPLEHWVAPS*SCPTGA
Trigger: TGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCA...ATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR TCA 90 bp ACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATACGTGCCTCAGACTCCTaGGTAGCTGGGATTACAAGC +
Preference number: 4 (lower is better)
Translates to: TSALLLGCSFMKLSHWSIRASDS*VAGITS
Trigger: GCTTGTAATCCCAGCTACTCAGGAGTCTGAGGCACG...TATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR TCA 90 bp GGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTAGCCTGCAGTCGCCACACTaGGATAACACAAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GLLLHEVVPLEHMLFLTSLQSPH*DNTREL
Trigger: CAGCTCTCTTGTGTTATCTCAGTGTGGCGACTGCAG...GCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR GCA 90 bp CACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATCAGCGTGGCCATCTTTaGCACAGCAGAGACAATGTG +
Preference number: 4 (lower is better)
Translates to: HFSPFVGLLLHEVVPLEHQRGHL*HSRDNV
Trigger: CACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTG...ATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR GCA 90 bp CCACAAAACTTAACATGTGTCTTCCCATCCACGGAAGCCCATGGCATTATGCTGTCACCCAAGCTGGAGTaGAGTGGTGCCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PQNLTCVFPSTEAHGIMLSPKLE*SGAISA
Trigger: AGCTGAGATGGCACCACTGCACTCCAGCTTGGGTGA...CAGCATAATGCCATGGGCTTCCGTGGATGGGAAGACACATGTTAAGTTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR TCA 90 bp ACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGGGTTGCTCCTTCATaGAGTTGTCCCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: TSALLLGCSFMKLSHWSIWVAPS*SCPTGA
Trigger: TGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCA...TATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR TCA 90 bp GTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGATGGGTTGCTCCTTCATaGAGTTGTCCCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: VPLNILLSLKQRLNGLVGWVAPS*SCPTGA
Trigger: TGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCA...TCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR TCA 90 bp ATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCACCTCTCTGAAATGTaGTCTCTGCTCCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: IHFSPFVGLLLHEVVPLEHLSEM*SLLQGQ
Trigger: CTGTCCTTGGAGCAGAGATCACATTTCAGAGAGGTG...CTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR TCA 90 bp GGCATTATGCTGCACTGTAAAATATGCAACGCTTCCCAAGAGGCAGCTCAAACACCTCCTGAGTTCAGGTaGTTCTCGTGCCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: GIMLHCKICNASQEAAQTPPEFR*FSCLRL
Trigger: GAGTCTGAGGCACGAGAATCACCTGAACTCAGGAGG...TGTTTGAGCTGCCTCTTGGGAAGCGTTGCATATTTTACAGTGCAGCATAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR GCA 90 bp AAATATGCAACGCTTCCCAAGAGGCAGCTCAAACACCAGCGTGGCCATCTTTGCGCCCTTTTGTTGGGTTaGTCCTTCATGAAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: KYATLPKRQLKHQRGHLCALLLG*SFMKLS
Trigger: GGACAACTTCATGAAGGAGCAACCCAACAAAAGGGC...GCAAAGATGGCCACGCTGGTGTTTGAGCTGCCTCTTGGGAAGCGTTGCATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR GCA 90 bp CCACAAAACTTAACATGTGTCTTCCCATCCACGGAAGCCCATGGCATTATGCTGCAGCGTGGCCATCTTTaGCACAGCAGAGACAATGTG +
Preference number: 4 (lower is better)
Translates to: PQNLTCVFPSTEAHGIMLQRGHL*HSRDNV
Trigger: CACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTG...CAGCATAATGCCATGGGCTTCCGTGGATGGGAAGACACATGTTAAGTTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp ATCCTTCCAACAGCCAAGGAGGCTATGACAGGTAGCTTCTATACCTTCCCATTAGCTCAAACACCAGCGTaGCCATCTTTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: ILPTAKEAMTGSFYTFPLAQTPA*PSLPQQ
Trigger: CTGCTGTGGCAAAGATGGCCACGCTGGTGTTTGAGC...TAATGGGAAGGTATAGAAGCTACCTGTCATAGCCTCCTTGGCTGTTGGAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CCA 90 bp CCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTGCTGCTTGCAATCTCTaGAGAACCTGGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PFVGLLLHEVVPLEHMLFAACNL*RTWLRL
Trigger: CAGCCTCAGCCAGGTTCTCCAGAGATTGCAAGCAGC...AAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627748.2
CDS-3UTR TCA 90 bp AGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTCACTCTCACCTCTCTaGAATGTGATCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SPFVGLLLHEVVPLEHMLSLSPL*NVISAP
Trigger: TGGAGCAGAGATCACATTTCAGAGAGGTGAGAGTGA...CAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR GCA 90 bp ATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCTGAAATGTGATCTCTaGTCCAAGGACAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IHFSPFVGLLLHEVVPLELKCDL*SKDSWL
Trigger: AAGCCAGCTGTCCTTGGAGCAGAGATCACATTTCAG...CTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR CCA 90 bp CCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTTATCTCTGGAGAACCTaGCTGAGGCTGTCCCGCATT +
Preference number: 4 (lower is better)
Translates to: PFVGLLLHEVVPLEHMLFYLWRT*LRLSRI
Trigger: AATGCGGGACAGCCTCAGCCAGGTTCTCCAGAGATA...AAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR CCA 90 bp TCTTCATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACAGTTCCTCATATCTCTaGAGAACCTGGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSTSALLLGCSFMKLSHSSSYL*RTWLRL
Trigger: CAGCCTCAGCCAGGTTCTCCAGAGATATGAGGAACT...GTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR CCA 90 bp CGGTCTGGTGGGAATAGTTTTCAGGAGAGAGGTGAACATCTTCTCATTAGTTTGGCTCAAACACCAGCGTaGCCATCTTTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: RSGGNSFQERGEHLLISLAQTPA*PSLPQQ
Trigger: CTGCTGTGGCAAAGATGGCCACGCTGGTGTTTGAGC...CAAACTAATGAGAAGATGTTCACCTCTCTCCTGAAAACTATTCCCACCAGACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR TCA 90 bp ATTCGTTCAATGATGTGTTGGCAATTAATCGCATTCCAAAAAGTGTCTACGGTAGATAATGAGGTGCGCTaGGCCCGCAGTCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: IRSMMCWQLIAFQKVSTVDNEVR*ARSPQG
Trigger: TCCCTGGGGACTGCGGGCTCAGCGCACCTCATTATC...TACCGTAGACACTTTTTGGAATGCGATTAATTGCCAACACATCATTGAACGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR TCA 90 bp TCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCACTCAGTTGTGTGAATaGTCTTGGGCATGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SALLLGCSFMKLSHWSICTQLCE*SWACLL
Trigger: GAGCAAACATGCCCAAGATCATTCACACAACTGAGT...GCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR TCA 90 bp ATCCTTCCAACAGCCAAGGAGGCTATGACAGGTAGCTTCTATACCTTCCCATTACAGCCAAGGAGGCTATaGCAGGTAGCTTCTATACCT +
Preference number: 4 (lower is better)
Translates to: ILPTAKEAMTGSFYTFPLQPRRL*QVASIP
Trigger: AGGTATAGAAGCTACCTGTCATAGCCTCCTTGGCTG...TAATGGGAAGGTATAGAAGCTACCTGTCATAGCCTCCTTGGCTGTTGGAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR TCA 90 bp GGCATTATGCTGCACTGTAAAATATGCAACGCTTCCCAAGAGGCAGCTCAAACACACCTCTCTGAAATGTaGTCTCTGCTCCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: GIMLHCKICNASQEAAQTHLSEM*SLLQGQ
Trigger: CTGTCCTTGGAGCAGAGATCACATTTCAGAGAGGTG...TGTTTGAGCTGCCTCTTGGGAAGCGTTGCATATTTTACAGTGCAGCATAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR TCA 90 bp ATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGAGCACCTCTCTGAAATGTaGTCTCTGCTCCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: IAKLEAEAKRSGGNSFQEHLSEM*SLLQGQ
Trigger: CTGTCCTTGGAGCAGAGATCACATTTCAGAGAGGTG...CTCCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR TCA 90 bp ATTCAAAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGCAGATTTTGTCGTGCCTCAGACTCCTaGGTAGCTGGGATTACAAGC +
Preference number: 4 (lower is better)
Translates to: IQSQELYMVPEGLSGRFCRASDS*VAGITS
Trigger: GCTTGTAATCCCAGCTACTCAGGAGTCTGAGGCACG...ACAAAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR GCA 90 bp GAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTTCCTTGATAATGAGGTaGGCTGAGCCCGCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: EYIAKLEAEAKRSGGNSFSLIMR*AEPAVP
Trigger: GGGGACTGCGGGCTCAGCGCACCTCATTATCAAGGA...AAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR GCA 90 bp GGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTAGCTGCCCTTTTGTTGGGTTaGTCCTTCATGAAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: GCSFMKLSHWSICCFSLAALLLG*SFMKLS
Trigger: GGACAACTTCATGAAGGAGCAACCCAACAAAAGGGC...AGCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR GCA 90 bp CAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGAGAGAGGTGAACATCTTCCTGAAATGTGATCTCTaGTCCAAGGACAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: QRLNGLVGIVFRREVNIFLKCDL*SKDSWL
Trigger: AAGCCAGCTGTCCTTGGAGCAGAGATCACATTTCAG...GAAGATGTTCACCTCTCTCCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CCA 90 bp GTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAGCCAGGAACTTTATATaGTTCCAGAGGGACTCTCTG +
Preference number: 4 (lower is better)
Translates to: VPLNILLSLKQRLNGLVGARNFI*FQRDSL
Trigger: CAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGC...TCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp CGGTCTGGTGGGAATAGTTTTCAGGAGAGAGGTGAACATCTTCTCATTAGTTTGAATCTCTGGAGAACCTaGCTGAGGCTGTCCCGCATT +
Preference number: 4 (lower is better)
Translates to: RSGGNSFQERGEHLLISLNLWRT*LRLSRI
Trigger: AATGCGGGACAGCCTCAGCCAGGTTCTCCAGAGATT...CAAACTAATGAGAAGATGTTCACCTCTCTCCTGAAAACTATTCCCACCAGACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397457.7
ENST00000627748.2
CDS-3UTR TCA 90 bp ACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATTGGAGTCTACAGACTaGGTCATTAGCTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: TSALLLGCSFMKLSHWSILESTD*VISCLH
Trigger: ATGCAAGCAGCTAATGACTCAGTCTGTAGACTCCAA...TATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000543936.7
CDS-3UTR TCA 90 bp CTGTGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCCAGCCAAGGAGGCTATaGCAGGTAGCTTCTATACCT +
Preference number: 4 (lower is better)
Translates to: LCGQTLLVHSKPGTLYGSQPRRL*QVASIP
Trigger: AGGTATAGAAGCTACCTGTCATAGCCTCCTTGGCTG...GGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR TCA 90 bp GTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAACATGCAGCCAAGAATaGAGCTTTGACAGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: VPLNILLSLKQRLNGLVGTCSQE*SFDSKP
Trigger: TGGCTTACTGTCAAAGCTTCATTCTTGGCTGCATGT...TCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR TCA 90 bp GTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTTTGGAGTCTACAGACTaGGTCATTAGCTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: VGLLLHEVVPLEHMLFLTLESTD*VISCLQ
Trigger: TTGCAAGCAGCTAATGACTCAGTCTGTAGACTCCAA...AGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627748.2
CDS-3UTR GCA 90 bp TTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGTCCCACTGGAGCATATaGTGTTTCTCACTAGCTACT +
Preference number: 4 (lower is better)
Translates to: FSPFVGLLLHEVVPLEHMSHWSI*CFSLAT
Trigger: AGTAGCTAGTGAGAAACAGCATATGCTCCAGTGGGA...CATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR GCA 90 bp TTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCAGCCCTTTTGTTGGGTTaGTCCTTCATGAAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LLGCSFMKLSHWSICCFSALLLG*SFMKLS
Trigger: GGACAACTTCATGAAGGAGCAACCCAACAAAAGGGC...TGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR GCA 90 bp ATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGAGTCCATGGCTTTTCTGTaGTCTTCATCCACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: IAKLEAEAKRSGGNSFQESMAFL*SSSTSA
Trigger: GGCTGAAGTGGATGAAGAGCACAGAAAAGCCATGGA...CTCCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR GCA 90 bp TTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCCTGAAATGTGATCTCTaGTCCAAGGACAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: FVGLLLHEVVPLEHMLFLLKCDL*SKDSWL
Trigger: AAGCCAGCTGTCCTTGGAGCAGAGATCACATTTCAG...GAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR GCA 90 bp CAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGAGAGAGGTGAACATCTTCCTGCACTGTAAAATATaGAACGCTTCCCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: QRLNGLVGIVFRREVNIFLHCKI*NASQEA
Trigger: TGCCTCTTGGGAAGCGTTGCATATTTTACAGTGCAG...GAAGATGTTCACCTCTCTCCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR GCA 90 bp AGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGCCCATGGCATTATGCTaGACTGTAAAATATGCAACG +
Preference number: 4 (lower is better)
Translates to: SPFVGLLLHEVVPLEHMLPMALC*TVKYAT
Trigger: CGTTGCATATTTTACAGTGCAGCATAATGCCATGGG...CAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR CCA 90 bp TCAAACACCAGCGTGGCCATCTTTGCCACAGCAGAGACAATGTGTTCACTCTCAATGAAGTTGTCCCACTaGAGCATATGCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SNTSVAIFATAETMCSLSMKLSH*SICCFS
Trigger: TGAGAAACAGCATATGCTCCAGTGGGACAACTTCAT...TGAGAGTGAACACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTGGTGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CCA 90 bp AGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGATGAAGTTGTCCCACTaGAGCATATGCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SPFVGLLLHEVVPLEHMLMKLSH*SICCFS
Trigger: TGAGAAACAGCATATGCTCCAGTGGGACAACTTCAT...CAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CCA 90 bp GAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTGCTCAAACACCAGCGTaGCCATCTTTGCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: EYIAKLEAEAKRSGGNSFAQTPA*PSLPQQ
Trigger: CTGCTGTGGCAAAGATGGCCACGCTGGTGTTTGAGC...AAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CCA 90 bp TTCATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGTGGGCAAACACTTCTaGTTCATTCAAAGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: FIHFSPFVGLLLHEVVPLVGKHF*FIQSQE
Trigger: TTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCAC...CAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR CCA 90 bp ATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGAGACTCCTGAGTAGCTaGGATTACAAGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: ILLSLKQRLNGLVGIVFRRLLSS*DYKRAP
Trigger: TGGTGCACGCTTGTAATCCCAGCTACTCAGGAGTCT...CCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp GAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTGCTGCTTGCAATCTCTaGAGAACCTGGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EYIAKLEAEAKRSGGNSFAACNL*RTWLRL
Trigger: CAGCCTCAGCCAGGTTCTCCAGAGATTGCAAGCAGC...AAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397457.7
ENST00000627748.2
3UTR CAA 72 bp ACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTaGTCCCACTGGAGCATATGCTGTTTCTCACTAGCT +
Preference number: 4 (lower is better)
Translates to: TSALLLGCSFMK*SHWSICCFSLA
Trigger: AGCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR TCA 90 bp TTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTATGGCACTCAGTTGTGTaGATGATCTTGGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: LGCSFMKLSHWSICCFSLWHSVV*MILGMF
Trigger: AAACATGCCCAAGATCATTCACACAACTGAGTGCCA...TAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR TCA 90 bp GAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTTGGGTTGCTCCTTCATaGAGTTGTCCCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: EYIAKLEAEAKRSGGNSFWVAPS*SCPTGA
Trigger: TGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCA...AAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR TCA 90 bp ATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTAGCTACTAAGTGGTCATCACTCTCACCTCTCTaGAATGTGATCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: MKLSHWSICCFSLATKWSSLSPL*NVISAP
Trigger: TGGAGCAGAGATCACATTTCAGAGAGGTGAGAGTGA...TGACCACTTAGTAGCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR TCA 90 bp GCCACTGAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATACATGCAGCCAAGAATaGAGCTTTGACAGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: ATEYIAKLEAEAKRSGGNTCSQE*SFDSKP
Trigger: TGGCTTACTGTCAAAGCTTCATTCTTGGCTGCATGT...ATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTCAGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR TCA 90 bp AACACTTTATACATCCTTCCAACAGCCAAGGAGGCTATGACAGGTAGCTTCTATCCAGGTACCAGCAAATaGTTGATGAGCCTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: NTLYILPTAKEAMTGSFYPGTSK*LMSLSS
Trigger: GCTTGACAGGCTCATCAATCATTTGCTGGTACCTGG...ATAGAAGCTACCTGTCATAGCCTCCTTGGCTGTTGGAAGGATGTATAAAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR GCA 90 bp ATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGAGTCCCACTGGAGCATATaGTGTTTCTCACTAGCTACT +
Preference number: 4 (lower is better)
Translates to: IAKLEAEAKRSGGNSFQESHWSI*CFSLAT
Trigger: AGTAGCTAGTGAGAAACAGCATATGCTCCAGTGGGA...CTCCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR GCA 90 bp TTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCTCCCACTGGAGCATATaGTGTTTCTCACTAGCTACT +
Preference number: 4 (lower is better)
Translates to: FVGLLLHEVVPLEHMLFLSHWSI*CFSLAT
Trigger: AGTAGCTAGTGAGAAACAGCATATGCTCCAGTGGGA...GAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR GCA 90 bp CGGTCTGGTGGGAATAGTTTTCAGGAGAGAGGTGAACATCTTCTCATTAGTTTGTCCATGGCTTTTCTGTaGTCTTCATCCACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RSGGNSFQERGEHLLISLSMAFL*SSSTSA
Trigger: GGCTGAAGTGGATGAAGAGCACAGAAAAGCCATGGA...CAAACTAATGAGAAGATGTTCACCTCTCTCCTGAAAACTATTCCCACCAGACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR GCA 90 bp ATTGATGAGCCTGTCAAGCCTACAGTAGCGGATAGAGAAAGTTGGCAGAAGTTCCTGCACTGTAAAATATaGAACGCTTCCCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: IDEPVKPTVADRESWQKFLHCKI*NASQEA
Trigger: TGCCTCTTGGGAAGCGTTGCATATTTTACAGTGCAG...GAACTTCTGCCAACTTTCTCTATCCGCTACTGTAGGCTTGACAGGCTCATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR GCA 90 bp CCACAAAACTTAACATGTGTCTTCCCATCCACGGAAGCCCATGGCATTATGCTGTTAACATGGACCATTTaGTGTGTGGGCAAACACTTC +
Preference number: 4 (lower is better)
Translates to: PQNLTCVFPSTEAHGIMLLTWTI*CVGKHF
Trigger: GAAGTGTTTGCCCACACAGCAAATGGTCCATGTTAA...CAGCATAATGCCATGGGCTTCCGTGGATGGGAAGACACATGTTAAGTTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp GGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTAGCTTCACCTTGAATAACTaGTCTGTGATCCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GLLLHEVVPLEHMLFLTSFTLNN*SVIQKP
Trigger: AGGCTTTTGGATCACAGACCAGTTATTCAAGGTGAA...GCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CCA 90 bp AAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGAGAGAGGTTCCAGAGGGACTCTCTaGCAGATTTTGTTGATTACT +
Preference number: 4 (lower is better)
Translates to: KLEAEAKRSGGNSFQERGSRGTL*QILLIT
Trigger: AGTAATCAACAAAATCTGCCAGAGAGTCCCTCTGGA...ACCTCTCTCCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp CCACAAAACTTAACATGTGTCTTCCCATCCACGGAAGCCCATGGCATTATGCTGTCCAGAGGGACTCTCTaGCAGATTTTGTTGATTACT +
Preference number: 4 (lower is better)
Translates to: PQNLTCVFPSTEAHGIMLSRGTL*QILLIT
Trigger: AGTAATCAACAAAATCTGCCAGAGAGTCCCTCTGGA...CAGCATAATGCCATGGGCTTCCGTGGATGGGAAGACACATGTTAAGTTTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR TCA 90 bp ATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGGAAACTTCTTTCTTCTaGTATAAGAGTGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: IHFSPFVGLLLHEVVPLEETSFF*YKSATE
Trigger: TTCAGTGGCACTCTTATATCAGAAGAAAGAAGTTTC...CTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR TCA 90 bp TGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAGATCACTCTCACCTCTCTaGAATGTGATCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: CGQTLLVHSKPGTLYGSRSLSPL*NVISAP
Trigger: TGGAGCAGAGATCACATTTCAGAGAGGTGAGAGTGA...TCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR TCA 90 bp CTTTCTTCTGATATAAGAGTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGCTGCAGTCGCCACACTaGGATAACACAAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSSDIRVPLNILLSLKQRLQSPH*DNTREL
Trigger: CAGCTCTCTTGTGTTATCTCAGTGTGGCGACTGCAG...CCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCACTCTTATATCAGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR GCA 90 bp AGGAGAGAGGTGAACATCTTCTCATTAGTTTGTGATTGTTGTGGTTCAAGTTCTCAGCGTGGCCATCTTTaGCACAGCAGAGACAATGTG +
Preference number: 4 (lower is better)
Translates to: RREVNIFSLVCDCCGSSSQRGHL*HSRDNV
Trigger: CACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTG...AGAACTTGAACCACAACAATCACAAACTAATGAGAAGATGTTCACCTCTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR GCA 90 bp ATTGATGAGCCTGTCAAGCCTACAGTAGCGGATAGAGAAAGTTGGCAGAAGTTCCCCATGGCATTATGCTaGACTGTAAAATATGCAACG +
Preference number: 4 (lower is better)
Translates to: IDEPVKPTVADRESWQKFPMALC*TVKYAT
Trigger: CGTTGCATATTTTACAGTGCAGCATAATGCCATGGG...GAACTTCTGCCAACTTTCTCTATCCGCTACTGTAGGCTTGACAGGCTCATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR GCA 90 bp TTCCCATCCACGGAAGCCCATGGCATTATGCTGCACTGTAAAATATGCAACGCTAAGCCCATGGCATTATaGTGCACTGTAAAATATGCA +
Preference number: 4 (lower is better)
Translates to: FPSTEAHGIMLHCKICNAKPMAL*CTVKYA
Trigger: TGCATATTTTACAGTGCAGCATAATGCCATGGGCTT...AGCGTTGCATATTTTACAGTGCAGCATAATGCCATGGGCTTCCGTGGATGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp TTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTAATGAAGTTGTCCCACTaGAGCATATGCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGCSFMKLSHWSICCFSLMKLSH*SICCFS
Trigger: TGAGAAACAGCATATGCTCCAGTGGGACAACTTCAT...TAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CCA 90 bp TTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCAATGAAGTTGTCCCACTaGAGCATATGCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LLGCSFMKLSHWSICCFSMKLSH*SICCFS
Trigger: TGAGAAACAGCATATGCTCCAGTGGGACAACTTCAT...TGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CCA 90 bp GAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTAGACTCCTGAGTAGCTaGGATTACAAGCGTGCACCA +
Preference number: 4 (lower is better)
Translates to: EYIAKLEAEAKRSGGNSFRLLSS*DYKRAP
Trigger: TGGTGCACGCTTGTAATCCCAGCTACTCAGGAGTCT...AAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp CTTTCTTCTGATATAAGAGTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGAATCTCTGGAGAACCTaGCTGAGGCTGTCCCGCATT +
Preference number: 4 (lower is better)
Translates to: LSSDIRVPLNILLSLKQRNLWRT*LRLSRI
Trigger: AATGCGGGACAGCCTCAGCCAGGTTCTCCAGAGATT...CCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCACTCTTATATCAGAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397457.7
ENST00000627748.2
CDS-3UTR TCA 90 bp TGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAGATTGGAGTCTACAGACTaGGTCATTAGCTGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: CGQTLLVHSKPGTLYGSRLESTD*VISCLH
Trigger: ATGCAAGCAGCTAATGACTCAGTCTGTAGACTCCAA...TCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR TCA 90 bp CCACAAAACTTAACATGTGTCTTCCCATCCACGGAAGCCCATGGCATTATGCTGCTTCTCATTAGTTTGTaGTTGTTGTGGTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: PQNLTCVFPSTEAHGIMLLLISL*LLWFKF
Trigger: GAACTTGAACCACAACAATCACAAACTAATGAGAAG...CAGCATAATGCCATGGGCTTCCGTGGATGGGAAGACACATGTTAAGTTTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR TCA 90 bp TTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTTCTCATTAGTTTGTaGTTGTTGTGGTTCAAGTTC +
Preference number: 4 (lower is better)
Translates to: FSPFVGLLLHEVVPLEHMLLISL*LLWFKF
Trigger: GAACTTGAACCACAACAATCACAAACTAATGAGAAG...CATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR TCA 90 bp GTGGGAATAGTTTTCAGGAGAGAGGTGAACATCTTCTCATTAGTTTGTGATTGTCAGCCAAGGAGGCTATaGCAGGTAGCTTCTATACCT +
Preference number: 4 (lower is better)
Translates to: VGIVFRREVNIFSLVCDCQPRRL*QVASIP
Trigger: AGGTATAGAAGCTACCTGTCATAGCCTCCTTGGCTG...ACAATCACAAACTAATGAGAAGATGTTCACCTCTCTCCTGAAAACTATTCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR TCA 90 bp TGGCAATTAATCGCATTCCAAAAAGTGTCTACGGTACAAAGGGAATTTTCATTTCCTCCTGAGTTCAGGTaGTTCTCGTGCCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: WQLIAFQKVSTVQREFSFPPEFR*FSCLRL
Trigger: GAGTCTGAGGCACGAGAATCACCTGAACTCAGGAGG...AAATGAAAATTCCCTTTGTACCGTAGACACTTTTTGGAATGCGATTAATTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR TCA 90 bp CTACATTACTCATGCAGTAACACTTTATACATCCTTCCAACAGCCAAGGAGGCTTTGGAGTCTACAGACTaGGTCATTAGCTGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: LHYSCSNTLYILPTAKEALESTD*VISCLQ
Trigger: TTGCAAGCAGCTAATGACTCAGTCTGTAGACTCCAA...AGCCTCCTTGGCTGTTGGAAGGATGTATAAAGTGTTACTGCATGAGTAATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397457.7
ENST00000627748.2
CDS-3UTR GCA 90 bp GAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTTCCATGGCTTTTCTGTaGTCTTCATCCACTTCAGCC +
Preference number: 4 (lower is better)
Translates to: EYIAKLEAEAKRSGGNSFSMAFL*SSSTSA
Trigger: GGCTGAAGTGGATGAAGAGCACAGAAAAGCCATGGA...AAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR GCA 90 bp ATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTAGCTACTAAGTGGTCAGCATTGTCAATTTTCTaGAGTCGCCACACTGAGATA +
Preference number: 4 (lower is better)
Translates to: MKLSHWSICCFSLATKWSALSIF*SRHTEI
Trigger: TATCTCAGTGTGGCGACTGCAGAAAATTGACAATGC...TGACCACTTAGTAGCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR GCA 90 bp ATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGGCATTGTCAATTTTCTaGAGTCGCCACACTGAGATA +
Preference number: 4 (lower is better)
Translates to: ILLSLKQRLNGLVGIVFRALSIF*SRHTEI
Trigger: TATCTCAGTGTGGCGACTGCAGAAAATTGACAATGC...CCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR GCA 90 bp TTCCCATCCACGGAAGCCCATGGCATTATGCTGCACTGTAAAATATGCAACGCTACTATCAGAAATCTTTaGTATACAAGTTGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: FPSTEAHGIMLHCKICNATIRNL*YTSWVA
Trigger: GGCTACCCAACTTGTATAGCAAAGATTTCTGATAGT...AGCGTTGCATATTTTACAGTGCAGCATAATGCCATGGGCTTCCGTGGATGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR CCA 90 bp CCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTTTCACCTTGAATAACTaGTCTGTGATCCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PFVGLLLHEVVPLEHMLFFTLNN*SVIQKP
Trigger: AGGCTTTTGGATCACAGACCAGTTATTCAAGGTGAA...AAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CCA 90 bp AAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGAGAGAGGTGAAAATAGTAAGTGCTaGAAGGCCACAAAACTTAAC +
Preference number: 4 (lower is better)
Translates to: KLEAEAKRSGGNSFQERGENSKC*KATKLN
Trigger: GTTAAGTTTTGTGGCCTTCCAGCACTTACTATTTTC...ACCTCTCTCCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp GGCATTATGCTGCACTGTAAAATATGCAACGCTTCCCAAGAGGCAGCTCAAACAGATTTACATTTAACATaGACCATTTGCTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GIMLHCKICNASQEAAQTDLHLT*TICCVG
Trigger: GCCCACACAGCAAATGGTCCATGTTAAATGTAAATC...TGTTTGAGCTGCCTCTTGGGAAGCGTTGCATATTTTACAGTGCAGCATAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp AAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGCAGATTTTGTTGATTAATTCCAACATGCCTTaGTGTCAGCAAGTGCGCTTT +
Preference number: 4 (lower is better)
Translates to: KPGTLYGSRGTLWQILLINSNMP*CQQVRF
Trigger: AAAGCGCACTTGCTGACACCAAGGCATGTTGGAATT...AATCAACAAAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR CCA 90 bp TTCCCATCCACGGAAGCCCATGGCATTATGCTGCACTGTAAAATATGCAACGCTCGTTCAATGATGTGTTaGCAATTAATCGCATTCCAA +
Preference number: 4 (lower is better)
Translates to: FPSTEAHGIMLHCKICNARSMMC*QLIAFQ
Trigger: TTGGAATGCGATTAATTGCCAACACATCATTGAACG...AGCGTTGCATATTTTACAGTGCAGCATAATGCCATGGGCTTCCGTGGATGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397457.7
3UTR CAA 72 bp TTTCCATCCACTGAATTAAGAAAATTCCAACATGCCTaGGTGTCAGCAAGTGCGCTTTTTAGTCCAGGTACC +
Preference number: 4 (lower is better)
Translates to: FPSTELRKFQHA*VSASALFSPGT
Trigger: GGTACCTGGACTAAAAAGCGCACTTGCTGACACCAAGGCATGTTGGAATTTTCTTAATTCAGTGGATGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR TCA 90 bp CTACATTACTCATGCAGTAACACTTTATACATCCTTCCAACAGCCAAGGAGGCTTTGACAAATGTTTACTaGGCATGTGCTTTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LHYSCSNTLYILPTAKEALTNVY*ACALCQ
Trigger: CTGGCACAAAGCACATGCTCAGTAAACATTTGTCAA...AGCCTCCTTGGCTGTTGGAAGGATGTATAAAGTGTTACTGCATGAGTAATGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR GCA 90 bp CTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGGATCTTGGGCATGTTTaGTCGCTCAATTATTCATTT +
Preference number: 4 (lower is better)
Translates to: LLVHSKPGTLYGSRGTLWDLGHV*SLNYSF
Trigger: AAATGAATAATTGAGCGAGCAAACATGCCCAAGATC...CCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR GCA 90 bp CTTTCTTCTGATATAAGAGTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGGCCCTTTTGTTGGGTTaGTCCTTCATGAAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LSSDIRVPLNILLSLKQRALLLG*SFMKLS
Trigger: GGACAACTTCATGAAGGAGCAACCCAACAAAAGGGC...CCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCACTCTTATATCAGAAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR GCA 90 bp AACACTTTATACATCCTTCCAACAGCCAAGGAGGCTATGACAGGTAGCTTCTATTTAACATGGACCATTTaGTGTGTGGGCAAACACTTC +
Preference number: 4 (lower is better)
Translates to: NTLYILPTAKEAMTGSFYLTWTI*CVGKHF
Trigger: GAAGTGTTTGCCCACACAGCAAATGGTCCATGTTAA...ATAGAAGCTACCTGTCATAGCCTCCTTGGCTGTTGGAAGGATGTATAAAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp CTGTGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCTTCACCTTGAATAACTaGTCTGTGATCCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LCGQTLLVHSKPGTLYGSFTLNN*SVIQKP
Trigger: AGGCTTTTGGATCACAGACCAGTTATTCAAGGTGAA...GGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp CCACAAAACTTAACATGTGTCTTCCCATCCACGGAAGCCCATGGCATTATGCTGAAAGCTGGAAAAATGTaGCACCCTTCTTTAAATATC +
Preference number: 4 (lower is better)
Translates to: PQNLTCVFPSTEAHGIMLKAGKM*HPSLNI
Trigger: GATATTTAAAGAAGGGTGCCACATTTTTCCAGCTTT...CAGCATAATGCCATGGGCTTCCGTGGATGGGAAGACACATGTTAAGTTTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp GGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTAGCTAAAGCTGGAAAAATGTaGCACCCTTCTTTAAATATC +
Preference number: 4 (lower is better)
Translates to: GCSFMKLSHWSICCFSLAKAGKM*HPSLNI
Trigger: GATATTTAAAGAAGGGTGCCACATTTTTCCAGCTTT...AGCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR CCA 90 bp CGGTCTGGTGGGAATAGTTTTCAGGAGAGAGGTGAACATCTTCTCATTAGTTTGGATTTACATTTAACATaGACCATTTGCTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RSGGNSFQERGEHLLISLDLHLT*TICCVG
Trigger: GCCCACACAGCAAATGGTCCATGTTAAATGTAAATC...CAAACTAATGAGAAGATGTTCACCTCTCTCCTGAAAACTATTCCCACCAGACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
3UTR CAA 72 bp TCTGATATAAGAGTGCCACTGAATATATTGCTAAGCTaGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTT +
Preference number: 4 (lower is better)
Translates to: SDIRVPLNILLS*KQRLNGLVGIV
Trigger: AACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCACTCTTATATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
3UTR CAA 72 bp CTTCTTTCTTCTGATATAAGAGTGCCACTGAATATATaGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LLSSDIRVPLNI*LSLKQRLNGLV
Trigger: CACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCACTCTTATATCAGAAGAAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR TCA 90 bp ATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGGAAACTTCTTTCTTCTaGTATAAGAGTGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: ILLSLKQRLNGLVGIVFRETSFF*YKSATE
Trigger: TTCAGTGGCACTCTTATATCAGAAGAAAGAAGTTTC...CCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR GCA 90 bp TTCCATCTCCTTCTATTTTCTGATAGTTACACTACATCTTCACCGTCAGAACACTCCCACTGGAGCATATaGTGTTTCTCACTAGCTACT +
Preference number: 4 (lower is better)
Translates to: FHLLLFSDSYTTSSPSEHSHWSI*CFSLAT
Trigger: AGTAGCTAGTGAGAAACAGCATATGCTCCAGTGGGA...GTGTTCTGACGGTGAAGATGTAGTGTAACTATCAGAAAATAGAAGGAGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627748.2
CDS-3UTR CCA 90 bp GAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTGCGGATAGAGAAAGTTaGCAGAAGTTCAGTGTTATT +
Preference number: 4 (lower is better)
Translates to: EYIAKLEAEAKRSGGNSFADRES*QKFSVI
Trigger: AATAACACTGAACTTCTGCCAACTTTCTCTATCCGC...AAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR GCA 90 bp TGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAGAGAGTCATTAGCTGCTTaGATTTATCCAAATAAAGAC +
Preference number: 4 (lower is better)
Translates to: CGQTLLVHSKPGTLYGSRESLAA*IYPNKD
Trigger: GTCTTTATTTGGATAAATGCAAGCAGCTAATGACTC...TCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR GCA 90 bp GTGGGAATAGTTTTCAGGAGAGAGGTGAACATCTTCTCATTAGTTTGTGATTGTAAGCCCATGGCATTATaGTGCACTGTAAAATATGCA +
Preference number: 4 (lower is better)
Translates to: VGIVFRREVNIFSLVCDCKPMAL*CTVKYA
Trigger: TGCATATTTTACAGTGCAGCATAATGCCATGGGCTT...ACAATCACAAACTAATGAGAAGATGTTCACCTCTCTCCTGAAAACTATTCCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp TTCCATCTCCTTCTATTTTCTGATAGTTACACTACATCTTCACCGTCAGAACACTTCACCTTGAATAACTaGTCTGTGATCCAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: FHLLLFSDSYTTSSPSEHFTLNN*SVIQKP
Trigger: AGGCTTTTGGATCACAGACCAGTTATTCAAGGTGAA...GTGTTCTGACGGTGAAGATGTAGTGTAACTATCAGAAAATAGAAGGAGATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627748.2
CDS-3UTR CCA 90 bp TGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAGATTGTGTCTCTACATTTaGGAAGAGTATGTTCATTTG +
Preference number: 4 (lower is better)
Translates to: CGQTLLVHSKPGTLYGSRLCLYI*EEYVHL
Trigger: CAAATGAACATACTCTTCCCAAATGTAGAGACACAA...TCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp AAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGCAGATTTTGTTGATTCTCCCTTTTCATGTGTaGGATATTTTTGGAAGTATT +
Preference number: 4 (lower is better)
Translates to: KPGTLYGSRGTLWQILLILPFHV*DIFGSI
Trigger: AATACTTCCAAAAATATCCCACACATGAAAAGGGAG...AATCAACAAAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR TCA 90 bp AAGAATGAAGCTTTGACAGTAAGCCATACATTTACACAGGCAGGCATTGTCAATGAAACTTCTTTCTTCTaGTATAAGAGTGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: KNEALTVSHTFTQAGIVNETSFF*YKSATE
Trigger: TTCAGTGGCACTCTTATATCAGAAGAAAGAAGTTTC...ATTGACAATGCCTGCCTGTGTAAATGTATGGCTTACTGTCAAAGCTTCATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR GCA 90 bp TGGCAATTAATCGCATTCCAAAAAGTGTCTACGGTACAAAGGGAATTTTCATTTAAGAAAATTCCAACATaGCTTGGTGTCAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: WQLIAFQKVSTVQREFSFKKIPT*LGVSKC
Trigger: GCACTTGCTGACACCAAGGCATGTTGGAATTTTCTT...AAATGAAAATTCCCTTTGTACCGTAGACACTTTTTGGAATGCGATTAATTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR CCA 90 bp CTTTCTTCTGATATAAGAGTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGGAAAATAGTAAGTGCTaGAAGGCCACAAAACTTAAC +
Preference number: 4 (lower is better)
Translates to: LSSDIRVPLNILLSLKQRENSKC*KATKLN
Trigger: GTTAAGTTTTGTGGCCTTCCAGCACTTACTATTTTC...CCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCACTCTTATATCAGAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp AAGAATGAAGCTTTGACAGTAAGCCATACATTTACACAGGCAGGCATTGTCAATAAAGCTGGAAAAATGTaGCACCCTTCTTTAAATATC +
Preference number: 4 (lower is better)
Translates to: KNEALTVSHTFTQAGIVNKAGKM*HPSLNI
Trigger: GATATTTAAAGAAGGGTGCCACATTTTTCCAGCTTT...ATTGACAATGCCTGCCTGTGTAAATGTATGGCTTACTGTCAAAGCTTCATTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CCA 90 bp TGGCAATTAATCGCATTCCAAAAAGTGTCTACGGTACAAAGGGAATTTTCATTTCTTTGCTATACAAGTTaGGTAGCCACAGTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: WQLIAFQKVSTVQREFSFLCYTS*VATVKN
Trigger: ATTCTTAACTGTGGCTACCCAACTTGTATAGCAAAG...AAATGAAAATTCCCTTTGTACCGTAGACACTTTTTGGAATGCGATTAATTGCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397457.7
3UTR CAA 72 bp TTAATTTCTTGGTTACAGCATTCGTTCAATGATGTGTaGGCAATTAATCGCATTCCAAAAAGTGTCTACGGT +
Preference number: 4 (lower is better)
Translates to: LISWLQHSFNDV*AINRIPKSVYG
Trigger: ACCGTAGACACTTTTTGGAATGCGATTAATTGCCAACACATCATTGAACGAATGCTGTAACCAAGAAATTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR CAA 90 bp TCATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGGGAGTCCCTCTTCTaGCTGCCACCGCCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: SSTSALLLGCSFMKLSHWRESLF*LPPPGA
Trigger: CGCCCCGGGCGGTGGCAGCAAGAAGAGGGACTCCCT...CCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp ATCCTTCCAACAGCCAAGGAGGCTATGACAGGTAGCTTCTATACCTTCCCATTAAGGGAGTCCCTCTTCTaGCTGCCACCGCCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: ILPTAKEAMTGSFYTFPLRESLF*LPPPGA
Trigger: CGCCCCGGGCGGTGGCAGCAAGAAGAGGGACTCCCT...TAATGGGAAGGTATAGAAGCTACCTGTCATAGCCTCCTTGGCTGTTGGAAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CAA 90 bp CTACATTACTCATGCAGTAACACTTTATACATCCTTCCAACAGCCAAGGAGGCTAGGGAGTCCCTCTTCTaGCTGCCACCGCCCGGGGCG +
Preference number: 5 (lower is better)
Translates to: LHYSCSNTLYILPTAKEARESLF*LPPPGA
Trigger: CGCCCCGGGCGGTGGCAGCAAGAAGAGGGACTCCCT...AGCCTCCTTGGCTGTTGGAAGGATGTATAAAGTGTTACTGCATGAGTAATGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CAA 90 bp AAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGAGAGAGGTCCAGCGTGGCCATCTTaGCCACAGCAGAGACAATGT +
Preference number: 5 (lower is better)
Translates to: KLEAEAKRSGGNSFQERGPAWPS*PQQRQC
Trigger: ACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTGG...ACCTCTCTCCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CAA 90 bp TTCCCATCCACGGAAGCCCATGGCATTATGCTGCACTGTAAAATATGCAACGCTTGCCAGGCACTGTTCTaGTTGGTCCTCCTATCTCTC +
Preference number: 5 (lower is better)
Translates to: FPSTEAHGIMLHCKICNACQALF*LVLLSL
Trigger: GAGAGATAGGAGGACCAACAAGAACAGTGCCTGGCA...AGCGTTGCATATTTTACAGTGCAGCATAATGCCATGGGCTTCCGTGGATGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR CAA 90 bp TCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCAGCCCTTTTGTTGGGTaGCTCCTTCATGAAGTTGTC +
Preference number: 5 (lower is better)
Translates to: STSALLLGCSFMKLSHWSSPFVG*LLHEVV
Trigger: GACAACTTCATGAAGGAGCAACCCAACAAAAGGGCT...GCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS CCA 90 bp CCTCCTATCTCTCAGCAACTTAGTTCCTCATATCTCTGGAGAACCTaGCTGAGGCTGTCCCGCATTGTGTCTCTACATTTGGGAAGAGTA +
Preference number: 5 (lower is better)
Translates to: PPISQQLSSSYLWRT*LRLSRIVSLHLGRV
Trigger: TACTCTTCCCAAATGTAGAGACACAATGCGGGACAGCCTCAGCCAGGTTCTCCAGAGATATGAGGAACTAAGTTGCTGAGAGATAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR CAA 90 bp TTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACAGGCACTGTTCTTGTaGGTCCTCCTATCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: LLGCSFMKLSHWSICCFSQALFL*VLLSLS
Trigger: GCTGAGAGATAGGAGGACCAACAAGAACAGTGCCTG...TGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR CAA 90 bp GCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTAGCCCTTTTGTTGGGTaGCTCCTTCATGAAGTTGTC +
Preference number: 5 (lower is better)
Translates to: ALLLGCSFMKLSHWSICCSPFVG*LLHEVV
Trigger: GACAACTTCATGAAGGAGCAACCCAACAAAAGGGCT...ACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp ATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGACTTCAGCCCTTTTGTaGGGTTGCTCCTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: IHFSPFVGLLLHEVVPLETSALL*GCSFMK
Trigger: CTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGT...CTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp TTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGTCCACTTCAGCCCTTTaGTTGGGTTGCTCCTTCATG +
Preference number: 5 (lower is better)
Translates to: FSPFVGLLLHEVVPLEHMSTSAL*LGCSFM
Trigger: CATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGA...CATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp ATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTCAGGCCAGCGTGGCCATCTTaGCCACAGCAGAGACAATGT +
Preference number: 5 (lower is better)
Translates to: ILLSLKQRLNGLVGIVFRPAWPS*PQQRQC
Trigger: ACATTGTCTCTGCTGTGGCAAAGATGGCCACGCTGG...CCTGAAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS TCA 90 bp TCACAAGACAAACGGTCTTCTGAGAGTCTTTTTGCTAGGCTGATCTaGAGCTCCCCAGCACCAAGACTGTTCAACTTCAGACTCACGTCA +
Preference number: 5 (lower is better)
Translates to: SQDKRSSESLFARLI*SSPAPRLFNFRLTS
Trigger: TGACGTGAGTCTGAAGTTGAACAGTCTTGGTGCTGGGGAGCTTCAGATCAGCCTAGCAAAAAGACTCTCAGAAGACCGTTTGTCTTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475998.1
CDS TCA 90 bp CCCTTTCACAAGACAAACGGTCTTCTGAGAGTCTTTTTGCTAGGCTaGTCTGAAGCTCCCCAGCACCAAGACTGTTCAACTTCAGACTCA +
Preference number: 5 (lower is better)
Translates to: PFHKTNGLLRVFLLG*SEAPQHQDCSTSDS
Trigger: TGAGTCTGAAGTTGAACAGTCTTGGTGCTGGGGAGCTTCAGATCAGCCTAGCAAAAAGACTCTCAGAAGACCGTTTGTCTTGTGAAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475998.1
CDS-3UTR CAA 90 bp CTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGTGCTCCTTCATGAAGTaGTCCCACTGGAGCATATGC +
Preference number: 5 (lower is better)
Translates to: LLVHSKPGTLYGSRGTLWCSFMK*SHWSIC
Trigger: GCATATGCTCCAGTGGGACAACTTCATGAAGGAGCA...CCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp TTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCATGCTCCTTCATGAAGTaGTCCCACTGGAGCATATGC +
Preference number: 5 (lower is better)
Translates to: LLGCSFMKLSHWSICCFSCSFMK*SHWSIC
Trigger: GCATATGCTCCAGTGGGACAACTTCATGAAGGAGCA...TGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp TTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCTGCTCCTTCATGAAGTaGTCCCACTGGAGCATATGC +
Preference number: 5 (lower is better)
Translates to: FVGLLLHEVVPLEHMLFLCSFMK*SHWSIC
Trigger: GCATATGCTCCAGTGGGACAACTTCATGAAGGAGCA...GAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp TTCATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGACTTCAGCCCTTTTGTaGGGTTGCTCCTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: FIHFSPFVGLLLHEVVPLTSALL*GCSFMK
Trigger: CTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGT...CAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp TTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTATCCACTTCAGCCCTTTaGTTGGGTTGCTCCTTCATG +
Preference number: 5 (lower is better)
Translates to: LGCSFMKLSHWSICCFSLSTSAL*LGCSFM
Trigger: CATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGA...TAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp TCATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGGTGCCACTGAATATATaGCTAAGCTTGAAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SSTSALLLGCSFMKLSHWVPLNI*LSLKQR
Trigger: CCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCAC...CCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR CAA 90 bp TTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGTTACACAGGCAGGCATaGTCAATTTTCTGCAGTCGC +
Preference number: 5 (lower is better)
Translates to: FSPFVGLLLHEVVPLEHMLHRQA*SIFCSR
Trigger: GCGACTGCAGAAAATTGACAATGCCTGCCTGTGTAA...CATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS TCA 90 bp CTATCTCTCAGCAACTTAGTTCCTCATATCTCTGGAGAACCTGGCTaGGGCTGTCCCGCATTGTGTCTCTACATTTGGGAAGAGTATGTT +
Preference number: 5 (lower is better)
Translates to: LSLSNLVPHISGEPG*GCPALCLYIWEEYV
Trigger: AACATACTCTTCCCAAATGTAGAGACACAATGCGGGACAGCCTCAGCCAGGTTCTCCAGAGATATGAGGAACTAAGTTGCTGAGAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR CAA 90 bp ACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATAATTTCTCCAAGATCCTaGATAATGAGGTGCGCTGAG +
Preference number: 5 (lower is better)
Translates to: TSALLLGCSFMKLSHWSIISPRS*IMRCAE
Trigger: CTCAGCGCACCTCATTATCAAGGATCTTGGAGAAAT...TATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp TTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCAAGCCCTTTTGTTGGGTaGCTCCTTCATGAAGTTGTC +
Preference number: 5 (lower is better)
Translates to: LLGCSFMKLSHWSICCFSSPFVG*LLHEVV
Trigger: GACAACTTCATGAAGGAGCAACCCAACAAAAGGGCT...TGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp TTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTTCAGCCCTTTTGTaGGGTTGCTCCTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: FVGLLLHEVVPLEHMLFLTSALL*GCSFMK
Trigger: CTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGT...GAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp ATCCTTCCAACAGCCAAGGAGGCTATGACAGGTAGCTTCTATACCTTCCCATTAACTTCAGCCCTTTTGTaGGGTTGCTCCTTCATGAAG +
Preference number: 5 (lower is better)
Translates to: ILPTAKEAMTGSFYTFPLTSALL*GCSFMK
Trigger: CTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGT...TAATGGGAAGGTATAGAAGCTACCTGTCATAGCCTCCTTGGCTGTTGGAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CAA 90 bp GGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAGAGGGATCCACTTCAGCCCTTTaGTTGGGTTGCTCCTTCATG +
Preference number: 5 (lower is better)
Translates to: GKHFWFIQSQELYMVPEGSTSAL*LGCSFM
Trigger: CATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGA...TCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp ATCCTTCCAACAGCCAAGGAGGCTATGACAGGTAGCTTCTATACCTTCCCATTATTACACAGGCAGGCATaGTCAATTTTCTGCAGTCGC +
Preference number: 5 (lower is better)
Translates to: ILPTAKEAMTGSFYTFPLLHRQA*SIFCSR
Trigger: GCGACTGCAGAAAATTGACAATGCCTGCCTGTGTAA...TAATGGGAAGGTATAGAAGCTACCTGTCATAGCCTCCTTGGCTGTTGGAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp ATTGATGAGCCTGTCAAGCCTACAGTAGCGGATAGAGAAAGTTGGCAGAAGTTCAAATTCCAACATGCCTaGGTGTCAGCAAGTGCGCTT +
Preference number: 5 (lower is better)
Translates to: IDEPVKPTVADRESWQKFKFQHA*VSASAL
Trigger: AAGCGCACTTGCTGACACCAAGGCATGTTGGAATTT...GAACTTCTGCCAACTTTCTCTATCCGCTACTGTAGGCTTGACAGGCTCATCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR CAA 90 bp ATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGATAACGAGTTTCACCTaGAATAACTGGTCTGTGATC +
Preference number: 5 (lower is better)
Translates to: IHFSPFVGLLLHEVVPLEITSFT*NNWSVI
Trigger: GATCACAGACCAGTTATTCAAGGTGAAACTCGTTAT...CTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp ATTCAAAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGCAGATTTTGTTCCACTTCAGCCCTTTaGTTGGGTTGCTCCTTCATG +
Preference number: 5 (lower is better)
Translates to: IQSQELYMVPEGLSGRFCSTSAL*LGCSFM
Trigger: CATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGA...ACAAAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp CACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATCTCCATCTCAGCATATaGTTCTTTAAGCCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: HFSPFVGLLLHEVVPLEHLHLSI*FFKPFH
Trigger: ATGGAAAGGCTTAAAGAACAATATGCTGAGATGGAG...ATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR CAA 90 bp GGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTAGCAATATATTGCTAAGCTaGAAGCAGAGGCTAAACGGT +
Preference number: 5 (lower is better)
Translates to: GLLLHEVVPLEHMLFLTSNILLS*KQRLNG
Trigger: ACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATT...GCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR CAA 90 bp GGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTAGCTGTGATCCAAAAGCCTaGAATGAATTTCTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: GLLLHEVVPLEHMLFLTSCDPKA*NEFLQD
Trigger: ATCTTGGAGAAATTCATTCAAGGCTTTTGGATCACA...GCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000543936.7
ENST00000627748.2
CDS-3UTR CAA 90 bp TCTTCATCCACTTCAGCCCTTTTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACCTCCATCTCAGCATATaGTTCTTTAAGCCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: SSSTSALLLGCSFMKLSHLHLSI*FFKPFH
Trigger: ATGGAAAGGCTTAAAGAACAATATGCTGAGATGGAG...GTGGGACAACTTCATGAAGGAGCAACCCAACAAAAGGGCTGAAGTGGATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR CAA 90 bp GGCATTATGCTGCACTGTAAAATATGCAACGCTTCCCAAGAGGCAGCTCAAACATTTAACATGGACCATTaGCTGTGTGGGCAAACACTT +
Preference number: 5 (lower is better)
Translates to: GIMLHCKICNASQEAAQTFNMDH*LCGQTL
Trigger: AAGTGTTTGCCCACACAGCAAATGGTCCATGTTAAA...TGTTTGAGCTGCCTCTTGGGAAGCGTTGCATATTTTACAGTGCAGCATAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp GTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAGCCAAGAATGAAGCTTaGACAGTAAGCCATACATTT +
Preference number: 5 (lower is better)
Translates to: VPLNILLSLKQRLNGLVGAKNEA*TVSHTF
Trigger: AAATGTATGGCTTACTGTCAAAGCTTCATTCTTGGC...TCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp GTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGATGTGATCCAAAAGCCTaGAATGAATTTCTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: VPLNILLSLKQRLNGLVGCDPKA*NEFLQD
Trigger: ATCTTGGAGAAATTCATTCAAGGCTTTTGGATCACA...TCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CAA 90 bp TTCATTCAAAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGCAGATTTGTGCCACTGAATATATaGCTAAGCTTGAAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: FIQSQELYMVPEGLSGRFVPLNI*LSLKQR
Trigger: CCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCAC...AAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp ATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCACTAGCTACTAAGTGGTCATTTAACATGGACCATTaGCTGTGTGGGCAAACACTT +
Preference number: 5 (lower is better)
Translates to: MKLSHWSICCFSLATKWSFNMDH*LCGQTL
Trigger: AAGTGTTTGCCCACACAGCAAATGGTCCATGTTAAA...TGACCACTTAGTAGCTAGTGAGAAACAGCATATGCTCCAGTGGGACAACTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR CAA 90 bp TTGTTGGGTTGCTCCTTCATGAAGTTGTCCCACTGGAGCATATGCTGTTTCTCAGCCAAGAATGAAGCTTaGACAGTAAGCCATACATTT +
Preference number: 5 (lower is better)
Translates to: LLGCSFMKLSHWSICCFSAKNEA*TVSHTF
Trigger: AAATGTATGGCTTACTGTCAAAGCTTCATTCTTGGC...TGAGAAACAGCATATGCTCCAGTGGGACAACTTCATGAAGGAGCAACCCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS-3UTR CAA 90 bp ATTGATGAGCCTGTCAAGCCTACAGTAGCGGATAGAGAAAGTTGGCAGAAGTTCTGTGATCCAAAAGCCTaGAATGAATTTCTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: IDEPVKPTVADRESWQKFCDPKA*NEFLQD
Trigger: ATCTTGGAGAAATTCATTCAAGGCTTTTGGATCACA...GAACTTCTGCCAACTTTCTCTATCCGCTACTGTAGGCTTGACAGGCTCATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR CAA 90 bp ACAGCCAAGGAGGCTATGACAGGTAGCTTCTATACCTTCCCATTAAGCCACAATCAAGTTCTTAAAAGGTaGAAAATTTCGCTAGGTCCT +
Preference number: 5 (lower is better)
Translates to: TAKEAMTGSFYTFPLSHNQVLKR*KISLGP
Trigger: AGGACCTAGCGAAATTTTCAACCTTTTAAGAACTTG...ATTGTGGCTTAATGGGAAGGTATAGAAGCTACCTGTCATAGCCTCCTTGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CAA 90 bp CTGTGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAATATATTGCTAAGCTaGAAGCAGAGGCTAAACGGT +
Preference number: 5 (lower is better)
Translates to: LCGQTLLVHSKPGTLYGSNILLS*KQRLNG
Trigger: ACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATT...GGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp GAATATATTGCTAAGCTTGAAGCAGAGGCTAAACGGTCTGGTGGGAATAGTTTTGTGCCACTGAATATATaGCTAAGCTTGAAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: EYIAKLEAEAKRSGGNSFVPLNI*LSLKQR
Trigger: CCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCAC...AAAACTATTCCCACCAGACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CAA 90 bp AAGAATGAAGCTTTGACAGTAAGCCATACATTTACACAGGCAGGCATTGTCAATATTTCTCCAAGATCCTaGATAATGAGGTGCGCTGAG +
Preference number: 5 (lower is better)
Translates to: KNEALTVSHTFTQAGIVNISPRS*IMRCAE
Trigger: CTCAGCGCACCTCATTATCAAGGATCTTGGAGAAAT...ATTGACAATGCCTGCCTGTGTAAATGTATGGCTTACTGTCAAAGCTTCATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp TGTGGGCAAACACTTCTGGTTCATTCAAAGCCAGGAACTTTATATGGTTCCAGAATAACGAGTTTCACCTaGAATAACTGGTCTGTGATC +
Preference number: 5 (lower is better)
Translates to: CGQTLLVHSKPGTLYGSRITSFT*NNWSVI
Trigger: GATCACAGACCAGTTATTCAAGGTGAAACTCGTTAT...TCTGGAACCATATAAAGTTCCTGGCTTTGAATGAACCAGAAGTGTTTGCCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp AAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGCAGATTTTGTTGATTCTCCATCTCAGCATATaGTTCTTTAAGCCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: KPGTLYGSRGTLWQILLILHLSI*FFKPFH
Trigger: ATGGAAAGGCTTAAAGAACAATATGCTGAGATGGAG...AATCAACAAAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp TTCATTCAAAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGCAGATTTAATATATTGCTAAGCTaGAAGCAGAGGCTAAACGGT +
Preference number: 5 (lower is better)
Translates to: FIQSQELYMVPEGLSGRFNILLS*KQRLNG
Trigger: ACCGTTTAGCCTCTGCTTCAAGCTTAGCAATATATT...AAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp TGGCAATTAATCGCATTCCAAAAAGTGTCTACGGTACAAAGGGAATTTTCATTTAGCCCTTTTGTTGGGTaGCTCCTTCATGAAGTTGTC +
Preference number: 5 (lower is better)
Translates to: WQLIAFQKVSTVQREFSFSPFVG*LLHEVV
Trigger: GACAACTTCATGAAGGAGCAACCCAACAAAAGGGCT...AAATGAAAATTCCCTTTGTACCGTAGACACTTTTTGGAATGCGATTAATTGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS-3UTR CAA 90 bp TTCATTCAAAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGCAGATTTCAAGTTCTTAAAAGGTaGAAAATTTCGCTAGGTCCT +
Preference number: 5 (lower is better)
Translates to: FIQSQELYMVPEGLSGRFQVLKR*KISLGP
Trigger: AGGACCTAGCGAAATTTTCAACCTTTTAAGAACTTG...AAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTTTGAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp AAGCCAGGAACTTTATATGGTTCCAGAGGGACTCTCTGGCAGATTTTGTTGATTCAAGTTCTTAAAAGGTaGAAAATTTCGCTAGGTCCT +
Preference number: 5 (lower is better)
Translates to: KPGTLYGSRGTLWQILLIQVLKR*KISLGP
Trigger: AGGACCTAGCGAAATTTTCAACCTTTTAAGAACTTG...AATCAACAAAATCTGCCAGAGAGTCCCTCTGGAACCATATAAAGTTCCTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000397457.7
CDS-3UTR CAA 90 bp CTTTCTTCTGATATAAGAGTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGATAACGAGTTTCACCTaGAATAACTGGTCTGTGATC +
Preference number: 5 (lower is better)
Translates to: LSSDIRVPLNILLSLKQRITSFT*NNWSVI
Trigger: GATCACAGACCAGTTATTCAAGGTGAAACTCGTTAT...CCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCACTCTTATATCAGAAGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CAA 90 bp AGGAGAGAGGTGAACATCTTCTCATTAGTTTGTGATTGTTGTGGTTCAAGTTCTATAACGAGTTTCACCTaGAATAACTGGTCTGTGATC +
Preference number: 5 (lower is better)
Translates to: RREVNIFSLVCDCCGSSSITSFT*NNWSVI
Trigger: GATCACAGACCAGTTATTCAAGGTGAAACTCGTTAT...AGAACTTGAACCACAACAATCACAAACTAATGAGAAGATGTTCACCTCTCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244777.6
ENST00000627748.2
CDS-3UTR CAA 90 bp CTTTCTTCTGATATAAGAGTGCCACTGAATATATTGCTAAGCTTGAAGCAGAGGTGTGATCCAAAAGCCTaGAATGAATTTCTCCAAGAT +
Preference number: 5 (lower is better)
Translates to: LSSDIRVPLNILLSLKQRCDPKA*NEFLQD
Trigger: ATCTTGGAGAAATTCATTCAAGGCTTTTGGATCACA...CCTCTGCTTCAAGCTTAGCAATATATTCAGTGGCACTCTTATATCAGAAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000627748.2
CDS-3UTR CAA 90 bp GTGGGAATAGTTTTCAGGAGAGAGGTGAACATCTTCTCATTAGTTTGTGATTGTAACTATCAGAAATCTTaGCTATACAAGTTGGGTAGC +
Preference number: 5 (lower is better)
Translates to: VGIVFRREVNIFSLVCDCNYQKS*LYKLGS
Trigger: GCTACCCAACTTGTATAGCAAAGATTTCTGATAGTT...ACAATCACAAACTAATGAGAAGATGTTCACCTCTCTCCTGAAAACTATTCCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397457.7
CDS TCA 90 bp CACCAAGACTGTTCAACTTCAGACTCACGTCAACTTCTTTCCAATTaGAAATTCTTGGTCGAACATTCTTCTAAAATGTCAGTCAAACTT +
Preference number: 5 (lower is better)
Translates to: HQDCSTSDSRQLLSN*KFLVEHSSKMSVKL
Trigger: AAGTTTGACTGACATTTTAGAAGAATGTTCGACCAAGAATTTTCAATTGGAAAGAAGTTGACGTGAGTCTGAAGTTGAACAGTCTTGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475998.1
CDS CAA 72 bp TGCGCTGAGCCCGCAGTCCCCAGGGAGTCCCTCTTCTaGCTGCCACCGCCCGGGGCGGCCTCACAACCCACA +
Preference number: 6 (lower is better)
Translates to: CAEPAVPRESLF*LPPPGAASQPT
Trigger: TGTGGGTTGTGAGGCCGCCCCGGGCGGTGGCAGCAAGAAGAGGGACTCCCTGGGGACTGCGGGCTCAGCGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244777.6
ENST00000397457.7
ENST00000543936.7
ENST00000627748.2
CDS CCA 72 bp CCTCCTATCTCTCAGCAACTTAGTTCCTCATATCTCTaGAGAACCTGGCTGAGGCTGTCCCGCATTGTGTCT +
Preference number: 6 (lower is better)
Translates to: PPISQQLSSSYL*RTWLRLSRIVS
Trigger: AGACACAATGCGGGACAGCCTCAGCCAGGTTCTCCAGAGATATGAGGAACTAAGTTGCTGAGAGATAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS TCA 72 bp AGCAACTTAGTTCCTCATATCTCTGGAGAACCTGGCTaGGGCTGTCCCGCATTGTGTCTCTACATTTGGGAA +
Preference number: 6 (lower is better)
Translates to: SNLVPHISGEPG*GCPALCLYIWE
Trigger: TTCCCAAATGTAGAGACACAATGCGGGACAGCCTCAGCCAGGTTCTCCAGAGATATGAGGAACTAAGTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS CCA 72 bp TCTCAGCAACTTAGTTCCTCATATCTCTGGAGAACCTaGCTGAGGCTGTCCCGCATTGTGTCTCTACATTTG +
Preference number: 6 (lower is better)
Translates to: SQQLSSSYLWRT*LRLSRIVSLHL
Trigger: CAAATGTAGAGACACAATGCGGGACAGCCTCAGCCAGGTTCTCCAGAGATATGAGGAACTAAGTTGCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244777.6
CDS TCA 72 bp AAACGGTCTTCTGAGAGTCTTTTTGCTAGGCTGATCTaGAGCTCCCCAGCACCAAGACTGTTCAACTTCAGA +
Preference number: 6 (lower is better)
Translates to: KRSSESLFARLI*SSPAPRLFNFR
Trigger: TCTGAAGTTGAACAGTCTTGGTGCTGGGGAGCTTCAGATCAGCCTAGCAAAAAGACTCTCAGAAGACCGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475998.1
CDS TCA 72 bp TGTTCAACTTCAGACTCACGTCAACTTCTTTCCAATTaGAAATTCTTGGTCGAACATTCTTCTAAAATGTCA +
Preference number: 6 (lower is better)
Translates to: CSTSDSRQLLSN*KFLVEHSSKMS
Trigger: TGACATTTTAGAAGAATGTTCGACCAAGAATTTTCAATTGGAAAGAAGTTGACGTGAGTCTGAAGTTGAACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475998.1