Pregenerated sensors for BLOC1S4 (Homo sapiens)
Ensembl gene IDs: ENSG00000186222Ensembl transcript IDs: ENST00000320776.5
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGTTCATTCAGTTTGATTCCCCATGCCCTCGACAAGCAGCTTTCTaGTTAGAGCTGGAAGACACAGGCTGGGTGCAGTGGCGACCCCGT | + |
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Preference number: 1 (lower is better) Translates to: KFIQFDSPCPRQAAF*LELEDTGWVQWRPR Trigger: ACGGGGTCGCCACTGCACCCAGCCTGTGTCTTCCAGCTCTAATCAGAAAGCTGCTTGTCGAGGGCATGGGGAATCAAACTGAATGAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| 3UTR-3UTR CCA 90 bp | TTAGAGCTGGAAGACACAGGCTGGGTGCAGTGGCGACCCCGTAGTCCCAGCTACGGTAAGCACCCCAGCTaGGGTCCTCTTGCCGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LELEDTGWVQWRPRSPSYGKHPS*GPLAAV Trigger: CACTGCGGCAAGAGGACCCCAGCTGGGGTGCTTACC...GTAGCTGGGACTACGGGGTCGCCACTGCACCCAGCCTGTGTCTTCCAGCTCTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| 3UTR-3UTR TCA 90 bp | ATATTCTCAGAAATTGTACCATTTCCTTTGGTCTACAATCCACGCTATAGGAGGGGTGGAAGGATCACTTaGGCCCAGGAGTTTCCGAAC | + |
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Preference number: 2 (lower is better) Translates to: IFSEIVPFPLVYNPRYRRGGRIT*AQEFPN Trigger: GTTCGGAAACTCCTGGGCTCAAGTGATCCTTCCACC...CCTCCTATAGCGTGGATTGTAGACCAAAGGAAATGGTACAATTTCTGAGAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| 3UTR TCA 72 bp | CAGTTTGATTCCCCATGCCCTCGACAAGCAGCTTTCTaGTTAGAGCTGGAAGACACAGGCTGGGTGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: QFDSPCPRQAAF*LELEDTGWVQW Trigger: CCACTGCACCCAGCCTGTGTCTTCCAGCTCTAATCAGAAAGCTGCTTGTCGAGGGCATGGGGAATCAAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| 3UTR-3UTR CAA 90 bp | TATTCTCAGAAATTGTACCATTTCCTTTGGTCTACAATCCACGCTATAGGAGGTAAAAGTTCATTCAGTTaGATTCCCCATGCCCTCGAC | + |
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Preference number: 3 (lower is better) Translates to: YSQKLYHFLWSTIHAIGGKSSFS*IPHALD Trigger: GTCGAGGGCATGGGGAATCAAACTGAATGAACTTTT...ACCTCCTATAGCGTGGATTGTAGACCAAAGGAAATGGTACAATTTCTGAGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR TCA 90 bp | TTAGAGCTGGAAGACACAGGCTGGGTGCAGTGGCGACCCCGTAGTCCCAGCTACGCGGCACGCCCTCGCTaGCGACGTGGGACGAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: LELEDTGWVQWRPRSPSYAARPR*RRGTSR Trigger: GCGACTCGTCCCACGTCGTCAGCGAGGGCGTGCCGC...GTAGCTGGGACTACGGGGTCGCCACTGCACCCAGCCTGTGTCTTCCAGCTCTAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR GCA 90 bp | GAGCTGGAAGACACAGGCTGGGTGCAGTGGCGACCCCGTAGTCCCAGCTACTGGGAAGCATGTCCAGCATaGCCACGAACTCGTCCACTC | + |
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Preference number: 4 (lower is better) Translates to: ELEDTGWVQWRPRSPSYWEACPA*PRTRPL Trigger: GAGTGGACGAGTTCGTGGGCATGCTGGACATGCTTC...CCAGTAGCTGGGACTACGGGGTCGCCACTGCACCCAGCCTGTGTCTTCCAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR GCA 90 bp | GCAGGATTTGCAATTCACTTCATACTGGAGGTAAGCACCCCAGCTGGGGTCCTCACGGCCCCGAGGCGCTaGTGTGGCTCTGGGAAACAG | + |
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Preference number: 4 (lower is better) Translates to: AGFAIHFILEVSTPAGVLTAPRR*CGSGKQ Trigger: CTGTTTCCCAGAGCCACAGCAGCGCCTCGGGGCCGT...GAGGACCCCAGCTGGGGTGCTTACCTCCAGTATGAAGTGAATTGCAAATCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR GCA 90 bp | TTAGAGCTGGAAGACACAGGCTGGGTGCAGTGGCGACCCCGTAGTCCCAGCTACGGCACGTTCATCGTGTaGAGGAGCTTCTTGAACGCC | + |
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Preference number: 4 (lower is better) Translates to: LELEDTGWVQWRPRSPSYGTFIV*RSFLNA Trigger: GGCGTTCAAGAAGCTCCTGCACACGATGAACGTGCC...GTAGCTGGGACTACGGGGTCGCCACTGCACCCAGCCTGTGTCTTCCAGCTCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CCA 90 bp | CCCTCGACAAGCAGCTTTCTGATTAGAGCTGGAAGACACAGGCTGGGTGCAGTGCCCGAGGCGCTGCTGTaGCTCTGGGAAACAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: PSTSSFLIRAGRHRLGAVPEALL*LWETVP Trigger: TGGCACTGTTTCCCAGAGCCACAGCAGCGCCTCGGG...CACTGCACCCAGCCTGTGTCTTCCAGCTCTAATCAGAAAGCTGCTTGTCGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CCA 90 bp | AGCAGGATTTGCAATTCACTTCATACTGGAGGTAAGCACCCCAGCTGGGGTCCTCCCTCGCTGACGACGTaGGACGAGTCGCCGCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SRICNSLHTGGKHPSWGPPSLTT*DESPRS Trigger: GCTTCGCGGCGACTCGTCCCACGTCGTCAGCGAGGG...AGGACCCCAGCTGGGGTGCTTACCTCCAGTATGAAGTGAATTGCAAATCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR GCA 90 bp | GCAGGATTTGCAATTCACTTCATACTGGAGGTAAGCACCCCAGCTGGGGTCCTCGGCTCTGGGAAACAGTaGCACTGTCCCCGCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AGFAIHFILEVSTPAGVLGSGKQ*HCPRSR Trigger: CCTGGAGCGGGGACAGTGGCACTGTTTCCCAGAGCC...GAGGACCCCAGCTGGGGTGCTTACCTCCAGTATGAAGTGAATTGCAAATCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR TCA 90 bp | GAGCTGGAAGACACAGGCTGGGTGCAGTGGCGACCCCGTAGTCCCAGCTACTGGAAAGTTCATTCAGTTTaGTTCCCCATGCCCTCGACA | + |
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Preference number: 4 (lower is better) Translates to: ELEDTGWVQWRPRSPSYWKVHSV*FPMPST Trigger: TGTCGAGGGCATGGGGAATCAAACTGAATGAACTTT...CCAGTAGCTGGGACTACGGGGTCGCCACTGCACCCAGCCTGTGTCTTCCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR GCA 90 bp | AGCAGGATTTGCAATTCACTTCATACTGGAGGTAAGCACCCCAGCTGGGGTCCTTCGGCCTTGGTGACCTaGTCCTCCATCCTGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: SRICNSLHTGGKHPSWGPSALVT*SSILAT Trigger: CGTGGCCAGGATGGAGGAGCAGGTCACCAAGGCCGA...AGGACCCCAGCTGGGGTGCTTACCTCCAGTATGAAGTGAATTGCAAATCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CCA 90 bp | AGCAGGATTTGCAATTCACTTCATACTGGAGGTAAGCACCCCAGCTGGGGTCCTGGTAAGCACCCCAGCTaGGGTCCTCTTGCCGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: SRICNSLHTGGKHPSWGPGKHPS*GPLAAV Trigger: CACTGCGGCAAGAGGACCCCAGCTGGGGTGCTTACC...AGGACCCCAGCTGGGGTGCTTACCTCCAGTATGAAGTGAATTGCAAATCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CCA 90 bp | TTAGAGCTGGAAGACACAGGCTGGGTGCAGTGGCGACCCCGTAGTCCCAGCTACAGTTTCCGAACAGTCTaGGCAACATACCAAGACCCT | + |
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Preference number: 4 (lower is better) Translates to: LELEDTGWVQWRPRSPSYSFRTV*ATYQDP Trigger: AGGGTCTTGGTATGTTGCCCAGACTGTTCGGAAACT...GTAGCTGGGACTACGGGGTCGCCACTGCACCCAGCCTGTGTCTTCCAGCTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR TCA 90 bp | GCAGGATTTGCAATTCACTTCATACTGGAGGTAAGCACCCCAGCTGGGGTCCTCTCAGGCCGTCAGAGCTaGGGCCTTTCACTGCAACAA | + |
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Preference number: 4 (lower is better) Translates to: AGFAIHFILEVSTPAGVLSGRQS*GLSLQQ Trigger: TTGTTGCAGTGAAAGGCCTCAGCTCTGACGGCCTGA...GAGGACCCCAGCTGGGGTGCTTACCTCCAGTATGAAGTGAATTGCAAATCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR TCA 90 bp | AGCAGGATTTGCAATTCACTTCATACTGGAGGTAAGCACCCCAGCTGGGGTCCTGGTGGAAGGATCACTTaGGCCCAGGAGTTTCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: SRICNSLHTGGKHPSWGPGGRIT*AQEFPN Trigger: GTTCGGAAACTCCTGGGCTCAAGTGATCCTTCCACC...AGGACCCCAGCTGGGGTGCTTACCTCCAGTATGAAGTGAATTGCAAATCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR GCA 90 bp | ATCCCACACTCCAACATCATATATGTCCATAAGCAGGATTTGCAATTCACTTCAACGCCCTGGGGAAGGTaGCCAGCTCGGCCTCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: IPHSNIIYVHKQDLQFTSTPWGR*PARPRP Trigger: AGGCCGAGGCCGAGCTGGGCACCTTCCCCAGGGCGT...TGAAGTGAATTGCAAATCCTGCTTATGGACATATATGATGTTGGAGTGTGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CCA 90 bp | CAGAAATTGTACCATTTCCTTTGGTCTACAATCCACGCTATAGGAGGTTTAATATCGGCGGCCTTCGCGTaGATGCGCGGCACGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: QKLYHFLWSTIHAIGGLISAAFA*MRGTPS Trigger: CGAGGGCGTGCCGCGCATCCACGCGAAGGCCGCCGA...TATTAAACCTCCTATAGCGTGGATTGTAGACCAAAGGAAATGGTACAATTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR GCA 90 bp | AGCAGGATTTGCAATTCACTTCATACTGGAGGTAAGCACCCCAGCTGGGGTCCTCAGTTTGATTCCCCATaGCCTCGACAAGCAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: SRICNSLHTGGKHPSWGPQFDSP*PRQAAF Trigger: GAAAGCTGCTTGTCGAGGGCATGGGGAATCAAACTG...AGGACCCCAGCTGGGGTGCTTACCTCCAGTATGAAGTGAATTGCAAATCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR GCA 90 bp | TTTAAAATCCCACACTCCAACATCATATATGTCCATAAGCAGGATTTGCAATTCCAGCTGGGGTCCTCTTaGCGCAGTGGTCAGGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: FKIPHSNIIYVHKQDLQFQLGSS*RSGQAV Trigger: GACGGCCTGACCACTGCGGCAAGAGGACCCCAGCTG...GAATTGCAAATCCTGCTTATGGACATATATGATGTTGGAGTGTGGGATTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR GCA 90 bp | TTTAAAATCCCACACTCCAACATCATATATGTCCATAAGCAGGATTTGCAATTCCGATCCTGCTGTAGATaGGCCGCATCTCGGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: FKIPHSNIIYVHKQDLQFRSCCR*AASRRP Trigger: AGGCCGCCGAGATGCGGCGCATCTACAGCAGGATCG...GAATTGCAAATCCTGCTTATGGACATATATGATGTTGGAGTGTGGGATTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR GCA 90 bp | CAGAAATTGTACCATTTCCTTTGGTCTACAATCCACGCTATAGGAGGTTTAATACCAGCCGGTCGATCCTaGTGTAGATGCGCCGCATCT | + |
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Preference number: 4 (lower is better) Translates to: QKLYHFLWSTIHAIGGLIPAGRS*CRCAAS Trigger: AGATGCGGCGCATCTACAGCAGGATCGACCGGCTGG...TATTAAACCTCCTATAGCGTGGATTGTAGACCAAAGGAAATGGTACAATTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CCA 90 bp | CAGAAATTGTACCATTTCCTTTGGTCTACAATCCACGCTATAGGAGGTTTAATAAAAAGCTACCCTCCATaGCCCGCGACCACCCGACTG | + |
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Preference number: 4 (lower is better) Translates to: QKLYHFLWSTIHAIGGLIKSYPP*PATTRL Trigger: CAGTCGGGTGGTCGCGGGCCATGGAGGGTAGCTTTT...TATTAAACCTCCTATAGCGTGGATTGTAGACCAAAGGAAATGGTACAATTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CCA 90 bp | CAGAAATTGTACCATTTCCTTTGGTCTACAATCCACGCTATAGGAGGTTTAATAGTAGCCGGCTTGCTGTaGCCTCGAGGGAGCAGACTT | + |
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Preference number: 4 (lower is better) Translates to: QKLYHFLWSTIHAIGGLIVAGLL*PRGSRL Trigger: AAGTCTGCTCCCTCGAGGCCACAGCAAGCCGGCTAC...TATTAAACCTCCTATAGCGTGGATTGTAGACCAAAGGAAATGGTACAATTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR TCA 90 bp | TTTAAAATCCCACACTCCAACATCATATATGTCCATAAGCAGGATTTGCAATTCTGTGCAGGAGCTTCTTaGACGCCCTGGGGAAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: FKIPHSNIIYVHKQDLQFCAGAS*TPWGRC Trigger: GCACCTTCCCCAGGGCGTTCAAGAAGCTCCTGCACA...GAATTGCAAATCCTGCTTATGGACATATATGATGTTGGAGTGTGGGATTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CCA 90 bp | AGCAGGATTTGCAATTCACTTCATACTGGAGGTAAGCACCCCAGCTGGGGTCCTCACATATGTTTGCTATaGACAAATGAAGACTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SRICNSLHTGGKHPSWGPHICLL*TNEDCE Trigger: CTCACAGTCTTCATTTGTCCATAGCAAACATATGTG...AGGACCCCAGCTGGGGTGCTTACCTCCAGTATGAAGTGAATTGCAAATCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR TCA 90 bp | ATCCCACACTCCAACATCATATATGTCCATAAGCAGGATTTGCAATTCACTTCACGACAAGCAGCTTTCTaGTTAGAGCTGGAAGACACA | + |
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Preference number: 4 (lower is better) Translates to: IPHSNIIYVHKQDLQFTSRQAAF*LELEDT Trigger: TGTGTCTTCCAGCTCTAATCAGAAAGCTGCTTGTCG...TGAAGTGAATTGCAAATCCTGCTTATGGACATATATGATGTTGGAGTGTGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR GCA 90 bp | TTTAAAATCCCACACTCCAACATCATATATGTCCATAAGCAGGATTTGCAATTCGCTGAGGCCTTTCACTaGAACAAGGGAAGTAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: FKIPHSNIIYVHKQDLQFAEAFH*NKGSSL Trigger: AAGACTACTTCCCTTGTTGCAGTGAAAGGCCTCAGC...GAATTGCAAATCCTGCTTATGGACATATATGATGTTGGAGTGTGGGATTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CCA 90 bp | TTTAAAATCCCACACTCCAACATCATATATGTCCATAAGCAGGATTTGCAATTCTTGTACCATTTCCTTTaGTCTACAATCCACGCTATA | + |
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Preference number: 4 (lower is better) Translates to: FKIPHSNIIYVHKQDLQFLYHFL*STIHAI Trigger: TATAGCGTGGATTGTAGACCAAAGGAAATGGTACAA...GAATTGCAAATCCTGCTTATGGACATATATGATGTTGGAGTGTGGGATTTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CCA 90 bp | TCCGCGCCCTCGTCCTCCCACGGCCCCGAGGCGCTGCTGTGGCTCTaGGAAACAGTGCCACTGTCCCCGCTCCAGGCGGCGCCCTGCGGC | + |
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Preference number: 5 (lower is better) Translates to: SAPSSSHGPEALLWL*ETVPLSPLQAAPCG Trigger: GCCGCAGGGCGCCGCCTGGAGCGGGGACAGTGGCACTGTTTCCCAGAGCCACAGCAGCGCCTCGGGGCCGTGGGAGGACGAGGGCGCGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CCA 90 bp | CCGTCCTCCGCGCCCTCGTCCTCCCACGGCCCCGAGGCGCTGCTGTaGCTCTGGGAAACAGTGCCACTGTCCCCGCTCCAGGCGGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: PSSAPSSSHGPEALL*LWETVPLSPLQAAP Trigger: GGGCGCCGCCTGGAGCGGGGACAGTGGCACTGTTTCCCAGAGCCACAGCAGCGCCTCGGGGCCGTGGGAGGACGAGGGCGCGGAGGACGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS GCA 90 bp | TGGCTCTGGGAAACAGTGCCACTGTCCCCGCTCCAGGCGGCGCCCTaGGGCTCGGCCTCTTCCGCGAGCCCCTCCGGCAGCGCTCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: WLWETVPLSPLQAAP*GSASSASPSGSAPP Trigger: TGGCGGAGCGCTGCCGGAGGGGCTCGCGGAAGAGGCCGAGCCGCAGGGCGCCGCCTGGAGCGGGGACAGTGGCACTGTTTCCCAGAGCCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS TCA 90 bp | GCCGCATCTCGGCGGCCTTCGCGTGGATGCGCGGCACGCCCTCGCTaGCGACGTGGGACGAGTCGCCGCGAAGCATGTCCAGCATGCCCA | + |
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Preference number: 5 (lower is better) Translates to: AASRRPSRGCAARPR*RRGTSRREACPACP Trigger: TGGGCATGCTGGACATGCTTCGCGGCGACTCGTCCCACGTCGTCAGCGAGGGCGTGCCGCGCATCCACGCGAAGGCCGCCGAGATGCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CCA 90 bp | TCGGCGGCCTTCGCGTGGATGCGCGGCACGCCCTCGCTGACGACGTaGGACGAGTCGCCGCGAAGCATGTCCAGCATGCCCACGAACTCG | + |
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Preference number: 5 (lower is better) Translates to: SAAFAWMRGTPSLTT*DESPRSMSSMPTNS Trigger: CGAGTTCGTGGGCATGCTGGACATGCTTCGCGGCGACTCGTCCCACGTCGTCAGCGAGGGCGTGCCGCGCATCCACGCGAAGGCCGCCGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS GCA 90 bp | CCACCATCCTCACGAAGGCCTCCAGCCGGTCGATCCTGCTGTAGATaGGCCGCATCTCGGCGGCCTTCGCGTGGATGCGCGGCACGCCCT | + |
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Preference number: 5 (lower is better) Translates to: PPSSRRPPAGRSCCR*AASRRPSRGCAARP Trigger: AGGGCGTGCCGCGCATCCACGCGAAGGCCGCCGAGATGCGGCGCATCTACAGCAGGATCGACCGGCTGGAGGCCTTCGTGAGGATGGTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CAA 90 bp | TTAGAGCTGGAAGACACAGGCTGGGTGCAGTGGCGACCCCGTAGTCCCAGCTACGGCTTCGTAGCCGGCTaGCTGTGGCCTCGAGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LELEDTGWVQWRPRSPSYGFVAG*LWPRGS Trigger: GCTCCCTCGAGGCCACAGCAAGCCGGCTACGAAGCC...GTAGCTGGGACTACGGGGTCGCCACTGCACCCAGCCTGTGTCTTCCAGCTCTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CAA 90 bp | TTAGAGCTGGAAGACACAGGCTGGGTGCAGTGGCGACCCCGTAGTCCCAGCTACCCAGCTGGGGTCCTCTaGCCGCAGTGGTCAGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: LELEDTGWVQWRPRSPSYPAGVL*PQWSGR Trigger: ACGGCCTGACCACTGCGGCAAGAGGACCCCAGCTGG...GTAGCTGGGACTACGGGGTCGCCACTGCACCCAGCCTGTGTCTTCCAGCTCTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CAA 90 bp | TTAGAGCTGGAAGACACAGGCTGGGTGCAGTGGCGACCCCGTAGTCCCAGCTACAGCTCGGCCTCGGCCTaGGTGACCTGCTCCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: LELEDTGWVQWRPRSPSYSSASA*VTCSSI Trigger: GATGGAGGAGCAGGTCACCAAGGCCGAGGCCGAGCT...GTAGCTGGGACTACGGGGTCGCCACTGCACCCAGCCTGTGTCTTCCAGCTCTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS GCA 90 bp | CTCGAGGGAGCAGACTTGCTAAAGAGCGAGGGCACGTTCATCGTGTaGAGGAGCTTCTTGAACGCCCTGGGGAAGGTGCCCAGCTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: LEGADLLKSEGTFIV*RSFLNALGKVPSSA Trigger: GGCCGAGCTGGGCACCTTCCCCAGGGCGTTCAAGAAGCTCCTGCACACGATGAACGTGCCCTCGCTCTTTAGCAAGTCTGCTCCCTCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CCA 90 bp | GTCTTCGGTCCGAAACAGGACGGGGGCTTCGTAGCCGGCTTGCTGTaGCCTCGAGGGAGCAGACTTGCTAAAGAGCGAGGGCACGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: VFGPKQDGGFVAGLL*PRGSRLAKERGHVH Trigger: ATGAACGTGCCCTCGCTCTTTAGCAAGTCTGCTCCCTCGAGGCCACAGCAAGCCGGCTACGAAGCCCCCGTCCTGTTTCGGACCGAAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS GCA 90 bp | TCCTCTTGCCGCAGTGGTCAGGCCGTCAGAGCTGAGGCCTTTCACTaGAACAAGGGAAGTAGTCTTCGGTCCGAAACAGGACGGGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: SSCRSGQAVRAEAFH*NKGSSLRSETGRGL Trigger: AAGCCCCCGTCCTGTTTCGGACCGAAGACTACTTCCCTTGTTGCAGTGAAAGGCCTCAGCTCTGACGGCCTGACCACTGCGGCAAGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CCA 90 bp | AGCAGGATTTGCAATTCACTTCATACTGGAGGTAAGCACCCCAGCTaGGGTCCTCTTGCCGCAGTGGTCAGGCCGTCAGAGCTGAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: SRICNSLHTGGKHPS*GPLAAVVRPSELRP Trigger: AGGCCTCAGCTCTGACGGCCTGACCACTGCGGCAAGAGGACCCCAGCTGGGGTGCTTACCTCCAGTATGAAGTGAATTGCAAATCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CAA 90 bp | CCCTCGACAAGCAGCTTTCTGATTAGAGCTGGAAGACACAGGCTGGGTGCAGTGCTCGAGGGAGCAGACTaGCTAAAGAGCGAGGGCACG | + |
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Preference number: 5 (lower is better) Translates to: PSTSSFLIRAGRHRLGAVLEGAD*LKSEGT Trigger: CGTGCCCTCGCTCTTTAGCAAGTCTGCTCCCTCGAG...CACTGCACCCAGCCTGTGTCTTCCAGCTCTAATCAGAAAGCTGCTTGTCGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CAA 90 bp | TTAGAGCTGGAAGACACAGGCTGGGTGCAGTGGCGACCCCGTAGTCCCAGCTACATTGTACCATTTCCTTaGGTCTACAATCCACGCTAT | + |
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Preference number: 5 (lower is better) Translates to: LELEDTGWVQWRPRSPSYIVPFP*VYNPRY Trigger: ATAGCGTGGATTGTAGACCAAAGGAAATGGTACAAT...GTAGCTGGGACTACGGGGTCGCCACTGCACCCAGCCTGTGTCTTCCAGCTCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CAA 90 bp | GCAGGATTTGCAATTCACTTCATACTGGAGGTAAGCACCCCAGCTGGGGTCCTCGTCCATAAGCAGGATTaGCAATTCACTTCATACTGG | + |
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Preference number: 5 (lower is better) Translates to: AGFAIHFILEVSTPAGVLVHKQD*QFTSYW Trigger: CCAGTATGAAGTGAATTGCAAATCCTGCTTATGGAC...GAGGACCCCAGCTGGGGTGCTTACCTCCAGTATGAAGTGAATTGCAAATCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CAA 90 bp | ATCCCACACTCCAACATCATATATGTCCATAAGCAGGATTTGCAATTCACTTCAGTGTGCAGGAGCTTCTaGAACGCCCTGGGGAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: IPHSNIIYVHKQDLQFTSVCRSF*NALGKV Trigger: CACCTTCCCCAGGGCGTTCAAGAAGCTCCTGCACAC...TGAAGTGAATTGCAAATCCTGCTTATGGACATATATGATGTTGGAGTGTGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS-3UTR CAA 90 bp | ATATTCTCAGAAATTGTACCATTTCCTTTGGTCTACAATCCACGCTATAGGAGGAAAAGTTCATTCAGTTaGATTCCCCATGCCCTCGAC | + |
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Preference number: 5 (lower is better) Translates to: IFSEIVPFPLVYNPRYRRKSSFS*IPHALD Trigger: GTCGAGGGCATGGGGAATCAAACTGAATGAACTTTT...CCTCCTATAGCGTGGATTGTAGACCAAAGGAAATGGTACAATTTCTGAGAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS TCA 72 bp | CGGCGGCCTTCGCGTGGATGCGCGGCACGCCCTCGCTaGCGACGTGGGACGAGTCGCCGCGAAGCATGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RRPSRGCAARPR*RRGTSRREACP Trigger: TGGACATGCTTCGCGGCGACTCGTCCCACGTCGTCAGCGAGGGCGTGCCGCGCATCCACGCGAAGGCCGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CCA 72 bp | GCGCCCTCGTCCTCCCACGGCCCCGAGGCGCTGCTGTaGCTCTGGGAAACAGTGCCACTGTCCCCGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: APSSSHGPEALL*LWETVPLSPLQ Trigger: CTGGAGCGGGGACAGTGGCACTGTTTCCCAGAGCCACAGCAGCGCCTCGGGGCCGTGGGAGGACGAGGGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CAA 72 bp | AACGCCCTGGGGAAGGTGCCCAGCTCGGCCTCGGCCTaGGTGACCTGCTCCTCCATCCTGGCCACGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NALGKVPSSASA*VTCSSILATRP Trigger: GGGCCGCGTGGCCAGGATGGAGGAGCAGGTCACCAAGGCCGAGGCCGAGCTGGGCACCTTCCCCAGGGCGTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CCA 72 bp | CCGGCAGCGCTCCGCCATCCGAAAAGCTACCCTCCATaGCCCGCGACCACCCGACTGCGCAGCGCTCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PAALRHPKSYPP*PATTRLRSARF Trigger: GAAGCGAGCGCTGCGCAGTCGGGTGGTCGCGGGCCATGGAGGGTAGCTTTTCGGATGGCGGAGCGCTGCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CCA 72 bp | TTCGCGTGGATGCGCGGCACGCCCTCGCTGACGACGTaGGACGAGTCGCCGCGAAGCATGTCCAGCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: FAWMRGTPSLTT*DESPRSMSSMP Trigger: GGGCATGCTGGACATGCTTCGCGGCGACTCGTCCCACGTCGTCAGCGAGGGCGTGCCGCGCATCCACGCGAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS GCA 72 bp | TCACGAAGGCCTCCAGCCGGTCGATCCTGCTGTAGATaGGCCGCATCTCGGCGGCCTTCGCGTGGATGCGCG | + |
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Preference number: 6 (lower is better) Translates to: SRRPPAGRSCCR*AASRRPSRGCA Trigger: CGCGCATCCACGCGAAGGCCGCCGAGATGCGGCGCATCTACAGCAGGATCGACCGGCTGGAGGCCTTCGTGA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS GCA 72 bp | CCACCATCCTCACGAAGGCCTCCAGCCGGTCGATCCTaGTGTAGATGCGCCGCATCTCGGCGGCCTTCGCGT | + |
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Preference number: 6 (lower is better) Translates to: PPSSRRPPAGRS*CRCAASRRPSR Trigger: ACGCGAAGGCCGCCGAGATGCGGCGCATCTACAGCAGGATCGACCGGCTGGAGGCCTTCGTGAGGATGGTGG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS TCA 72 bp | AGAGCGAGGGCACGTTCATCGTGTGCAGGAGCTTCTTaGACGCCCTGGGGAAGGTGCCCAGCTCGGCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: RARARSSCAGAS*TPWGRCPARPR Trigger: CCGAGGCCGAGCTGGGCACCTTCCCCAGGGCGTTCAAGAAGCTCCTGCACACGATGAACGTGCCCTCGCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CAA 72 bp | AAGAGCGAGGGCACGTTCATCGTGTGCAGGAGCTTCTaGAACGCCCTGGGGAAGGTGCCCAGCTCGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: KSEGTFIVCRSF*NALGKVPSSAS Trigger: CGAGGCCGAGCTGGGCACCTTCCCCAGGGCGTTCAAGAAGCTCCTGCACACGATGAACGTGCCCTCGCTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CAA 90 bp | GACTTGCTAAAGAGCGAGGGCACGTTCATCGTGTGCAGGAGCTTCTaGAACGCCCTGGGGAAGGTGCCCAGCTCGGCCTCGGCCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: DLLKSEGTFIVCRSF*NALGKVPSSASALV Trigger: CACCAAGGCCGAGGCCGAGCTGGGCACCTTCCCCAGGGCGTTCAAGAAGCTCCTGCACACGATGAACGTGCCCTCGCTCTTTAGCAAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CAA 90 bp | GAAGTAGTCTTCGGTCCGAAACAGGACGGGGGCTTCGTAGCCGGCTaGCTGTGGCCTCGAGGGAGCAGACTTGCTAAAGAGCGAGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: EVVFGPKQDGGFVAG*LWPRGSRLAKERGH Trigger: GTGCCCTCGCTCTTTAGCAAGTCTGCTCCCTCGAGGCCACAGCAAGCCGGCTACGAAGCCCCCGTCCTGTTTCGGACCGAAGACTACTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CAA 72 bp | TTCGGTCCGAAACAGGACGGGGGCTTCGTAGCCGGCTaGCTGTGGCCTCGAGGGAGCAGACTTGCTAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: FGPKQDGGFVAG*LWPRGSRLAKE Trigger: CTCTTTAGCAAGTCTGCTCCCTCGAGGCCACAGCAAGCCGGCTACGAAGCCCCCGTCCTGTTTCGGACCGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS GCA 72 bp | GCAGACTTGCTAAAGAGCGAGGGCACGTTCATCGTGTaGAGGAGCTTCTTGAACGCCCTGGGGAAGGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: ADLLKSEGTFIV*RSFLNALGKVP Trigger: GGGCACCTTCCCCAGGGCGTTCAAGAAGCTCCTGCACACGATGAACGTGCCCTCGCTCTTTAGCAAGTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS CCA 72 bp | TGCAATTCACTTCATACTGGAGGTAAGCACCCCAGCTaGGGTCCTCTTGCCGCAGTGGTCAGGCCGTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CNSLHTGGKHPS*GPLAAVVRPSE Trigger: CTCTGACGGCCTGACCACTGCGGCAAGAGGACCCCAGCTGGGGTGCTTACCTCCAGTATGAAGTGAATTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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| CDS GCA 72 bp | CGCAGTGGTCAGGCCGTCAGAGCTGAGGCCTTTCACTaGAACAAGGGAAGTAGTCTTCGGTCCGAAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: RSGQAVRAEAFH*NKGSSLRSETG Trigger: TCCTGTTTCGGACCGAAGACTACTTCCCTTGTTGCAGTGAAAGGCCTCAGCTCTGACGGCCTGACCACTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320776.5 |
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