RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BLNK (Homo sapiens)

Ensembl gene IDs: ENSG00000095585

Ensembl transcript IDs: ENST00000224337.10, ENST00000371176.6, ENST00000413476.6, ENST00000427367.6, ENST00000467799.6, ENST00000468252.1, ENST00000472763.1, ENST00000485193.1, ENST00000495266.1

Found 395 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCCGGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTTaGTTTCCCAGGCCCCACTGTTTCGACCTGAAGCTGTTCCTGGAG +
Preference number: 1 (lower is better)
Translates to: SRPVATGMVQLVEVT*FPRPHCFDLKLFLE
Trigger: CTCCAGGAACAGCTTCAGGTCGAAACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR CCA 90 bp CTGAAGCTGTTCCTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTaGTTGATCTATTCACCATGGGAGCTTTTTCAGGTGGAGGTGAAC +
Preference number: 1 (lower is better)
Translates to: LKLFLEERRALRNLA*LIYSPWELFQVEVN
Trigger: GTTCACCTCCACCTGAAAAAGCTCCCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAGGAACAGCTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR TCA 90 bp TTCTGGGCAGGAGGAAACACTGGTGACTGCACAGCTTCTTGTCTGTaGCTTGACCCTCGGTGGCGTTCAGCAGGTATAGGTTTTTCTTCA +
Preference number: 1 (lower is better)
Translates to: FWAGGNTGDCTASCL*LDPRWRSAGIGFSS
Trigger: TGAAGAAAAACCTATACCTGCTGAACGCCACCGAGGGTCAAGTCACAGACAAGAAGCTGTGCAGTCACCAGTGTTTCCTCCTGCCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR TCA 90 bp TGTCAAGCATTGGCAGTGGAGAGCCCAGCTACATTAGTGTACCAATaGTCATTGTGGAGGTTTAAATTTCCAGCCACTTTGTTTTATGCA +
Preference number: 1 (lower is better)
Translates to: CQALAVESPATLVYQ*SLWRFKFPATLFYA
Trigger: TGCATAAAACAAAGTGGCTGGAAATTTAAACCTCCACAATGATCATTGGTACACTAATGTAGCTGGGCTCTCCACTGCCAATGCTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR GCA 90 bp AGATTCTGCATTTCTAACAAGCTCCAGATGAGGTTGATGCTATCTTaGTGGGAATCAAACTTTGTGTTGCAAAGGCTTAGAAGATCCTGT +
Preference number: 1 (lower is better)
Translates to: RFCISNKLQMRLMLS*WESNFVLQRLRRSC
Trigger: ACAGGATCTTCTAAGCCTTTGCAACACAAAGTTTGATTCCCAGCAAGATAGCATCAACCTCATCTGGAGCTTGTTAGAAATGCAGAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
3UTR CCA 90 bp AGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAAAAAGAAATaGATGACCACTTCAATAGCTGACTCCATCTTCCATTTTATTACT +
Preference number: 1 (lower is better)
Translates to: RSGNRTSPHELLKKK*MTTSIADSIFHFIT
Trigger: AGTAATAAAATGGAAGATGGAGTCAGCTATTGAAGTGGTCATCCATTTCTTTTTAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
3UTR TCA 90 bp TTGACTATATCTGTAAAGACCTCATTCCCAAATAAGGTCACATTCTaGGATATGTGGCCTTATGGATTAGGACTTCAACATATCTTTTTG +
Preference number: 1 (lower is better)
Translates to: LTISVKTSFPNKVTF*DMWPYGLGLQHIFL
Trigger: CAAAAAGATATGTTGAAGTCCTAATCCATAAGGCCACATATCTCAGAATGTGACCTTATTTGGGAATGAGGTCTTTACAGATATAGTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR CAA 90 bp TTCCCGGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTaGGTTTCCCAGGCCCCACTGTTTCGACCTGAAGCTGTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: FPARGNGDGAAGGGD*VSQAPLFRPEAVPG
Trigger: TCCAGGAACAGCTTCAGGTCGAAACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCCGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR-3UTR TCA 90 bp CGGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTTGGTTTCCCAGGGGAATTTGGCTTGGTTaGTCTATTCACCATGGGAGC +
Preference number: 2 (lower is better)
Translates to: RPVATGMVQLVEVTWFPRGIWLG*SIHHGS
Trigger: GCTCCCATGGTGAATAGATCAACCAAGCCAAATTCC...CCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR CAA 90 bp AAGCTGTTCCTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTaGATCTATTCACCATGGGAGCTTTTTCAGGTGGAGGTGAACTGC +
Preference number: 2 (lower is better)
Translates to: KLFLEERRALRNLAW*IYSPWELFQVEVNC
Trigger: GCAGTTCACCTCCACCTGAAAAAGCTCCCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAGGAACAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR-3UTR TCA 90 bp GAGGAAACACTGGTGACTGCACAGCTTCTTGTCTGTGACTTGACCCTCGGTGGCTTTTTCAGGTGGAGGTaGACTGCTTTCTGTGGGATG +
Preference number: 2 (lower is better)
Translates to: EETLVTAQLLVCDLTLGGFFRWR*TAFCGM
Trigger: CATCCCACAGAAAGCAGTTCACCTCCACCTGAAAAA...GCCACCGAGGGTCAAGTCACAGACAAGAAGCTGTGCAGTCACCAGTGTTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR-3UTR CCA 90 bp CTTGACCCTCGGTGGCGTTCAGCAGGTATAGGTTTTTCTTCACAAACACTTGAACTGGTGGAGGTGACTTaGTTTCCCAGGCCCCACTGT +
Preference number: 2 (lower is better)
Translates to: LDPRWRSAGIGFSSQTLELVEVT*FPRPHC
Trigger: ACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAG...TTCAAGTGTTTGTGAAGAAAAACCTATACCTGCTGAACGCCACCGAGGGTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR-3UTR TCA 90 bp TTTCTTCACAAACACTTGAAGCATTCTGTTGAGAGGCAACTGGAGTTGTCTTCATGCAGCTGGTGGAGGTaGCTTGGTTTCCCAGGCCCC +
Preference number: 2 (lower is better)
Translates to: FLHKHLKHSVERQLELSSCSWWR*LGFPGP
Trigger: GGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCA...TGAAGACAACTCCAGTTGCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR-3UTR GCA 90 bp CCAGCCATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCCAGTTCCCCTGCACATaGTCTCTTGCCTGCCACCAT +
Preference number: 2 (lower is better)
Translates to: PAIVLRPTLLTSSYLDYIQFPCT*SLACHH
Trigger: ATGGTGGCAGGCAAGAGAGCATGTGCAGGGGAACTG...GATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAATGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR-3UTR GCA 90 bp CACGCGGGCAGGTTTTCCCATGTTGTTGTGATAGTGAGTAAGTCTCATGAGATCACATGCTCTCTTGCCTaGCACCATGTAAAACATGCC +
Preference number: 2 (lower is better)
Translates to: HAGRFSHVVVIVSKSHEITCSLA*HHVKHA
Trigger: GGCATGTTTTACATGGTGGCAGGCAAGAGAGCATGT...GATCTCATGAGACTTACTCACTATCACAACAACATGGGAAAACCTGCCCGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR CAA 90 bp CTCCAGATGAGGTTGATGCTATCTTGCTGGGAATCAAACTTTGTGTaGCAAAGGCTTAGAAGATCCTGTTGGGCCACACTTCTGCATTCC +
Preference number: 2 (lower is better)
Translates to: LQMRLMLSCWESNFV*QRLRRSCWATLLHS
Trigger: GGAATGCAGAAGTGTGGCCCAACAGGATCTTCTAAGCCTTTGCAACACAAAGTTTGATTCCCAGCAAGATAGCATCAACCTCATCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
3UTR-3UTR CCA 90 bp CTTGACCCTCGGTGGCGTTCAGCAGGTATAGGTTTTTCTTCACAAACACTTGAACTGTTGAGAGGCAACTaGAGTTGTCTTCAGTGGTGT +
Preference number: 2 (lower is better)
Translates to: LDPRWRSAGIGFSSQTLELLRGN*SCLQWC
Trigger: ACACCACTGAAGACAACTCCAGTTGCCTCTCAACAG...TTCAAGTGTTTGTGAAGAAAAACCTATACCTGCTGAACGCCACCGAGGGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR-3UTR CCA 90 bp GGTATCTCTTTTATTCCTTGGTGTTCACCAATGTCTGCTTTTCTGCTCTTGTTTATGGGAGGGACCTGGTaGGAGGTAACTGAATCACGC +
Preference number: 2 (lower is better)
Translates to: GISFIPWCSPMSAFLLLFMGGTW*EVTESR
Trigger: GCGTGATTCAGTTACCTCCCACCAGGTCCCTCCCAT...AAACAAGAGCAGAAAAGCAGACATTGGTGAACACCAAGGAATAAAAGAGATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR-3UTR GCA 90 bp CACGCGGGCAGGTTTTCCCATGTTGTTGTGATAGTGAGTAAGTCTCATGAGATCTGTAAAACATGCCTTTaGTTCTTCTTTGCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: HAGRFSHVVVIVSKSHEICKTCL*FFFAFC
Trigger: GCAGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACA...GATCTCATGAGACTTACTCACTATCACAACAACATGGGAAAACCTGCCCGCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR-3UTR TCA 90 bp CCAGCCATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCCTTTGGGAAAGTGTCTaGAGCAATGGTATTGATCTT +
Preference number: 2 (lower is better)
Translates to: PAIVLRPTLLTSSYLDYILWESV*SNGIDL
Trigger: AAGATCAATACCATTGCTTCAGACACTTTCCCAAAG...GATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAATGGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR-3UTR GCA 90 bp TTCTGCATTTCTAACAAGCTCCAGATGAGGTTGATGCTATCTTGCTGGGAATCAGTTGGGCCACACTTCTaGATTCCAGGAGAGATTAAA +
Preference number: 2 (lower is better)
Translates to: FCISNKLQMRLMLSCWESVGPHF*IPGEIK
Trigger: TTTAATCTCTCCTGGAATGCAGAAGTGTGGCCCAAC...TGATTCCCAGCAAGATAGCATCAACCTCATCTGGAGCTTGTTAGAAATGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
3UTR-3UTR GCA 90 bp TTTCTTCACAAACACTTGAAGCATTCTGTTGAGAGGCAACTGGAGTTGTCTTCACAGGTGGAGGTGAACTaGTTTCTGTGGGATGAATAT +
Preference number: 2 (lower is better)
Translates to: FLHKHLKHSVERQLELSSQVEVN*FLWDEY
Trigger: ATATTCATCCCACAGAAAGCAGTTCACCTCCACCTG...TGAAGACAACTCCAGTTGCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR-3UTR TCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCCTTTGGGAAAGTGTCTaGAGCAATGGTATTGATCTT +
Preference number: 2 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSLWESV*SNGIDL
Trigger: AAGATCAATACCATTGCTTCAGACACTTTCCCAAAG...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
3UTR-3UTR TCA 90 bp TCAACATACTTTCATAGATTGCTATCTTATGCAGTGGCCAAGTGTGTTCCCCATGCTGTCATTCCACTTTaGAACTTGATATGGTTTGGC +
Preference number: 2 (lower is better)
Translates to: STYFHRLLSYAVAKCVPHAVIPL*NLIWFG
Trigger: GCCAAACCATATCAAGTTTCAAAGTGGAATGACAGC...ATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR-3UTR CCA 90 bp ATAGCAGGGTTTCTTAAATATGATTTACATTCAGATCCCCTGGAGATCTTGCTACTTAGAAGATCCTGTTaGGCCACACTTCTGCATTCC +
Preference number: 2 (lower is better)
Translates to: IAGFLKYDLHSDPLEILLLRRSC*ATLLHS
Trigger: GGAATGCAGAAGTGTGGCCCAACAGGATCTTCTAAG...TAGCAAGATCTCCAGGGGATCTGAATGTAAATCATATTTAAGAAACCCTGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495266.1
3UTR-3UTR TCA 90 bp TCAACATACTTTCATAGATTGCTATCTTATGCAGTGGCCAAGTGTGTTCCCCATTATATATCCCATGGTTaGGAGTGCTCACAAAAAGGA +
Preference number: 2 (lower is better)
Translates to: STYFHRLLSYAVAKCVPHYISHG*ECSQKG
Trigger: TCCTTTTTGTGAGCACTCTCAACCATGGGATATATA...ATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR-3UTR CCA 90 bp TCAACATACTTTCATAGATTGCTATCTTATGCAGTGGCCAAGTGTGTTCCCCATCCTGATTCTCCACGATaGTATCTCTTTTATTCCTTG +
Preference number: 2 (lower is better)
Translates to: STYFHRLLSYAVAKCVPHPDSPR*YLFYSL
Trigger: CAAGGAATAAAAGAGATACCATCGTGGAGAATCAGG...ATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR-3UTR TCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTACTTTGGGAAAGTGTCTaGAGCAATGGTATTGATCTT +
Preference number: 2 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLLWESV*SNGIDL
Trigger: AAGATCAATACCATTGCTTCAGACACTTTCCCAAAG...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
3UTR CAA 90 bp ACCCTGAAATTATTACCTTCTGGCCTTTCAACATACTTTCATAGATaGCTATCTTATGCAGTGGCCAAGTGTGTTCCCCATTTAATTATT +
Preference number: 2 (lower is better)
Translates to: TLKLLPSGLSTYFHR*LSYAVAKCVPHLII
Trigger: AATAATTAAATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGAAAGGCCAGAAGGTAATAATTTCAGGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR-3UTR TCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCCTTTGGGAAAGTGTCTaGAGCAATGGTATTGATCTT +
Preference number: 2 (lower is better)
Translates to: NISSMITQPHQILTVHQVLWESV*SNGIDL
Trigger: AAGATCAATACCATTGCTTCAGACACTTTCCCAAAG...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
3UTR CCA 72 bp GTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTTaGTTTCCCAGGCCCCACTGTTTCGACCTGAAGCTG +
Preference number: 3 (lower is better)
Translates to: VATGMVQLVEVT*FPRPHCFDLKL
Trigger: CAGCTTCAGGTCGAAACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR-3UTR CAA 90 bp GAGGAAACACTGGTGACTGCACAGCTTCTTGTCTGTGACTTGACCCTCGGTGGCGAGAGGCAACTGGAGTaGTCTTCAGTGGTGTCGTTG +
Preference number: 3 (lower is better)
Translates to: EETLVTAQLLVCDLTLGGERQLE*SSVVSL
Trigger: CAACGACACCACTGAAGACAACTCCAGTTGCCTCTC...GCCACCGAGGGTCAAGTCACAGACAAGAAGCTGTGCAGTCACCAGTGTTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR TCA 72 bp GGAGGAAACACTGGTGACTGCACAGCTTCTTGTCTGTaGCTTGACCCTCGGTGGCGTTCAGCAGGTATAGGT +
Preference number: 3 (lower is better)
Translates to: GGNTGDCTASCL*LDPRWRSAGIG
Trigger: ACCTATACCTGCTGAACGCCACCGAGGGTCAAGTCACAGACAAGAAGCTGTGCAGTCACCAGTGTTTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR-3UTR CAA 90 bp GAGGAAACACTGGTGACTGCACAGCTTCTTGTCTGTGACTTGACCCTCGGTGGCAGGAATTTGGCTTGGTaGATCTATTCACCATGGGAG +
Preference number: 3 (lower is better)
Translates to: EETLVTAQLLVCDLTLGGRNLAW*IYSPWE
Trigger: CTCCCATGGTGAATAGATCAACCAAGCCAAATTCCT...GCCACCGAGGGTCAAGTCACAGACAAGAAGCTGTGCAGTCACCAGTGTTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR-3UTR CAA 90 bp CTTGACCCTCGGTGGCGTTCAGCAGGTATAGGTTTTTCTTCACAAACACTTGAAGAGGAGAGGCGGGCGTaGAGGAATTTGGCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: LDPRWRSAGIGFSSQTLEEERRA*RNLAWL
Trigger: CAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTC...TTCAAGTGTTTGTGAAGAAAAACCTATACCTGCTGAACGCCACCGAGGGTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR GCA 72 bp TATAAAGGGCAGTTCCCCTGCACATGCTCTCTTGCCTaGCACCATGTAAAACATGCCTTTGCTTCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: YKGQFPCTCSLA*HHVKHAFASSL
Trigger: CAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCATGTGCAGGGGAACTGCCCTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR TCA 72 bp TTGGCAGTGGAGAGCCCAGCTACATTAGTGTACCAATaGTCATTGTGGAGGTTTAAATTTCCAGCCACTTTG +
Preference number: 3 (lower is better)
Translates to: LAVESPATLVYQ*SLWRFKFPATL
Trigger: CAAAGTGGCTGGAAATTTAAACCTCCACAATGATCATTGGTACACTAATGTAGCTGGGCTCTCCACTGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR GCA 72 bp TGCAAAGGCTTAGAAGATCCTGTTGGGCCACACTTCTaGATTCCAGGAGAGATTAAATGTTCTGACATCAAG +
Preference number: 3 (lower is better)
Translates to: CKGLEDPVGPHF*IPGEIKCSDIK
Trigger: CTTGATGTCAGAACATTTAATCTCTCCTGGAATGCAGAAGTGTGGCCCAACAGGATCTTCTAAGCCTTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
3UTR-3UTR CAA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAACTTAATTGTCAAGCATaGGCAGTGGAGAGCCCAGCT +
Preference number: 3 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKLNCQA*AVESPA
Trigger: AGCTGGGCTCTCCACTGCCAATGCTTGACAATTAAG...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR-3UTR CAA 90 bp CCAGCCATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCCTTCAACATATCTTTTaGAGGGGACCACAGTTCAAT +
Preference number: 3 (lower is better)
Translates to: PAIVLRPTLLTSSYLDYILQHIF*RGPQFN
Trigger: ATTGAACTGTGGTCCCCTCAAAAAGATATGTTGAAG...GATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAATGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR-3UTR CAA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTACCATTACATCCTTCTaGCCTATACTTACAGATATC +
Preference number: 3 (lower is better)
Translates to: CSLACHHVKHAFASSLPSTITSF*PILTDI
Trigger: GATATCTGTAAGTATAGGCAAGAAGGATGTAATGGT...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR-3UTR CAA 90 bp TGGTGGTTTATAGCAGGGTTTCTTAAATATGATTTACATTCAGATCCCCTGGAGAAGCTCCAGATGAGGTaGATGCTATCTTGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: WWFIAGFLKYDLHSDPLEKLQMR*MLSCWE
Trigger: TTCCCAGCAAGATAGCATCAACCTCATCTGGAGCTT...CTCCAGGGGATCTGAATGTAAATCATATTTAAGAAACCCTGCTATAAACCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495266.1
3UTR-3UTR CAA 90 bp TTTCTTCACAAACACTTGAAGCATTCTGTTGAGAGGCAACTGGAGTTGTCTTCAGTTGAGGAATTTGGCTaGGTTGATCTATTCACCATG +
Preference number: 3 (lower is better)
Translates to: FLHKHLKHSVERQLELSSVEEFG*VDLFTM
Trigger: CATGGTGAATAGATCAACCAAGCCAAATTCCTCAAC...TGAAGACAACTCCAGTTGCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
3UTR-3UTR CAA 90 bp TCAACATACTTTCATAGATTGCTATCTTATGCAGTGGCCAAGTGTGTTCCCCATATATATATCCCATGGTaGAGAGTGCTCACAAAAAGG +
Preference number: 3 (lower is better)
Translates to: STYFHRLLSYAVAKCVPHIYIPW*RVLTKR
Trigger: CCTTTTTGTGAGCACTCTCAACCATGGGATATATAT...ATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR-3UTR CAA 90 bp TCAACATACTTTCATAGATTGCTATCTTATGCAGTGGCCAAGTGTGTTCCCCATTATCTCTTTTATTCCTaGGTGTTCACCAATGTCTGC +
Preference number: 3 (lower is better)
Translates to: STYFHRLLSYAVAKCVPHYLFYS*VFTNVC
Trigger: GCAGACATTGGTGAACACCAAGGAATAAAAGAGATA...ATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR GCA 72 bp TATTACCTTCTGGCCTTTCAACATACTTTCATAGATTaGTATCTTATGCAGTGGCCAAGTGTGTTCCCCATT +
Preference number: 3 (lower is better)
Translates to: YYLLAFQHTFID*YLMQWPSVFPI
Trigger: AATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGAAAGGCCAGAAGGTAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR GCA 72 bp ATTTCTAACAAGCTCCAGATGAGGTTGATGCTATCTTaGTGGGAATCAAACTTTGTGTTGCAAAGGCTTAGA +
Preference number: 3 (lower is better)
Translates to: ISNKLQMRLMLS*WESNFVLQRLR
Trigger: TCTAAGCCTTTGCAACACAAAGTTTGATTCCCAGCAAGATAGCATCAACCTCATCTGGAGCTTGTTAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
3UTR TCA 72 bp TCTGTAAAGACCTCATTCCCAAATAAGGTCACATTCTaGGATATGTGGCCTTATGGATTAGGACTTCAACAT +
Preference number: 3 (lower is better)
Translates to: SVKTSFPNKVTF*DMWPYGLGLQH
Trigger: ATGTTGAAGTCCTAATCCATAAGGCCACATATCTCAGAATGTGACCTTATTTGGGAATGAGGTCTTTACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
3UTR TCA 72 bp GAAAGTTCATATCCATATATATATATATCCCATGGTTaGGAGTGCTCACAAAAAGGAACCATTACATCCTTC +
Preference number: 3 (lower is better)
Translates to: ESSYPYIYISHG*ECSQKGTITSF
Trigger: GAAGGATGTAATGGTTCCTTTTTGTGAGCACTCTCAACCATGGGATATATATATATATGGATATGAACTTTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp CGGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTTGGTTTCCCAGGGGTTTCCTGCTCTACTaGAGGCGGCTCGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RPVATGMVQLVEVTWFPRGFLLY*RRLVAV
Trigger: GACAGCTACGAGCCGCCTCCAGTAGAGCAGGAAACC...CCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR TCA 90 bp CGGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTTGGTTTCCCAGGCCGGCCACTCAAGTCTaGTTTCTGAGAGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RPVATGMVQLVEVTWFPRPATQV*FLRVQA
Trigger: AGCCTGCACTCTCAGAAATCAGACTTGAGTGGCCGG...CCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR TCA 90 bp CGGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTTGGTTTCCCAGGCTTGAAGCATTCTGTTaGGAGGCAACTGGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: RPVATGMVQLVEVTWFPRLEAFC*EATGVV
Trigger: GACAACTCCAGTTGCCTCTCAACAGAATGCTTCAAG...CCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR GCA 90 bp GAGGAAACACTGGTGACTGCACAGCTTCTTGTCTGTGACTTGACCCTCGGTGGCACCGGCCTGGTTTCCTaGTCTACTGGAGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: EETLVTAQLLVCDLTLGGTGLVS*STGGGS
Trigger: CGAGCCGCCTCCAGTAGAGCAGGAAACCAGGCCGGT...GCCACCGAGGGTCAAGTCACAGACAAGAAGCTGTGCAGTCACCAGTGTTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CCA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGGGCGAAGGGCAGGGCTaGGTGAACCGGCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LEERRALRNLAWLIYSPWGEGQG*VNRPGF
Trigger: GAAACCAGGCCGGTTCACCCAGCCCTGCCCTTCGCC...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CCA 90 bp CGGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTTGGTTTCCCAGGCTGTTGAGAGGCAACTaGAGTTGTCTTCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RPVATGMVQLVEVTWFPRLLRGN*SCLQWC
Trigger: ACACCACTGAAGACAACTCCAGTTGCCTCTCAACAG...CCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR TCA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGTGCAGCTGGTGGAGGTaGCTTGGTTTCCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LEERRALRNLAWLIYSPWCSWWR*LGFPGP
Trigger: GGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCA...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR TCA 90 bp GAGGAAACACTGGTGACTGCACAGCTTCTTGTCTGTGACTTGACCCTCGGTGGCTTCTTGTCTGTGACTTaGCCCTCGGTGGCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: EETLVTAQLLVCDLTLGGFLSVT*PSVAFS
Trigger: GCTGAACGCCACCGAGGGTCAAGTCACAGACAAGAA...GCCACCGAGGGTCAAGTCACAGACAAGAAGCTGTGCAGTCACCAGTGTTTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CCA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGCTGGTGGAGGTGACTTaGTTTCCCAGGCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: LEERRALRNLAWLIYSPWLVEVT*FPRPHC
Trigger: ACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAG...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR TCA 90 bp GAGGAAACACTGGTGACTGCACAGCTTCTTGTCTGTGACTTGACCCTCGGTGGCCTCAAGTCTGATTTCTaGGAGTGCAGGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EETLVTAQLLVCDLTLGGLKSDF*ECRLLA
Trigger: TGCCAGCAGCCTGCACTCTCAGAAATCAGACTTGAG...GCCACCGAGGGTCAAGTCACAGACAAGAAGCTGTGCAGTCACCAGTGTTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR TCA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGAGCTGCCTCAACTTCTaGCTGGCGGGGACGGTTATT +
Preference number: 4 (lower is better)
Translates to: LEERRALRNLAWLIYSPWSCLNF*LAGTVI
Trigger: AATAACCGTCCCCGCCAGTCAGAAGTTGAGGCAGCT...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR TCA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGCCCACTGTTTCGACCTaGAGCTGTTCCTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LEERRALRNLAWLIYSPWPTVST*SCSWRR
Trigger: TCTCCTCCAGGAACAGCTTCAGGTCGAAACAGTGGG...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CCA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGAGCATGGTAAGCCTCTaGTCTCAAGGGTTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: LEERRALRNLAWLIYSPWSMVSL*SQGFRP
Trigger: TGGCCGGAACCCTTGAGACCAGAGGCTTACCATGCT...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR GCA 90 bp CCAGCCATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCACCGGCCTGGTTTCCTaGTCTACTGGAGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: PAIVLRPTLLTSSYLDYITGLVS*STGGGS
Trigger: CGAGCCGCCTCCAGTAGAGCAGGAAACCAGGCCGGT...GATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAATGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp TCAACATACTTTCATAGATTGCTATCTTATGCAGTGGCCAAGTGTGTTCCCCATAAGGGCAGGGCTGGGTaGACCGGCCTGGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: STYFHRLLSYAVAKCVPHKGRAG*TGLVSC
Trigger: GCAGGAAACCAGGCCGGTTCACCCAGCCCTGCCCTT...ATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGTTTTTCAGGTGGAGGTaGACTGCTTTCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: LEERRALRNLAWLIYSPWFFRWR*TAFCGM
Trigger: CATCCCACAGAAAGCAGTTCACCTCCACCTGAAAAA...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR TCA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGGGAATTTGGCTTGGTTaGTCTATTCACCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: LEERRALRNLAWLIYSPWGIWLG*SIHHGS
Trigger: GCTCCCATGGTGAATAGATCAACCAAGCCAAATTCC...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR TCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTGCAGCTGGTGGAGGTaGCTTGGTTTCCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSCSWWR*LGFPGP
Trigger: GGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCA...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR GCA 90 bp AGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGGAGCTTTTTAAGTCATCGGACCACTaGTCCTCTTCGTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RRALRNLAWLIYSPWELFKSSDH*SSSSAG
Trigger: CCCTGCTGACGAAGAGGAGCAGTGGTCCGATGACTT...AAAAAGCTCCCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CCA 90 bp CTTGACCCTCGGTGGCGTTCAGCAGGTATAGGTTTTTCTTCACAAACACTTGAACTGGGTGAACCGGCCTaGTTTCCTGCTCTACTGGAG +
Preference number: 4 (lower is better)
Translates to: LDPRWRSAGIGFSSQTLELGEPA*FPALLE
Trigger: CTCCAGTAGAGCAGGAAACCAGGCCGGTTCACCCAG...TTCAAGTGTTTGTGAAGAAAAACCTATACCTGCTGAACGCCACCGAGGGTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CCA 90 bp CTTGACCCTCGGTGGCGTTCAGCAGGTATAGGTTTTTCTTCACAAACACTTGAACTATATACTCGCCTCTaGCGAAGGGCAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LDPRWRSAGIGFSSQTLELYTRL*RRAGLG
Trigger: ACCCAGCCCTGCCCTTCGCCAGAGGCGAGTATATAG...TTCAAGTGTTTGTGAAGAAAAACCTATACCTGCTGAACGCCACCGAGGGTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CCA 90 bp CCAGCCATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCGGCTCCAGCATACCATaGCTTGCAGAGAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: PAIVLRPTLLTSSYLDYIGSSIP*LAENAS
Trigger: GCTGGCGTTCTCTGCAAGCCATGGTATGCTGGAGCC...GATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAATGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp CTTGCTGGGAATCAAACTTTGTGTTGCAAAGGCTTAGAAGATCCTGTTGGGCCAAGCTGCCTCAACTTCTaGCTGGCGGGGACGGTTATT +
Preference number: 4 (lower is better)
Translates to: LAGNQTLCCKGLEDPVGPSCLNF*LAGTVI
Trigger: AATAACCGTCCCCGCCAGTCAGAAGTTGAGGCAGCT...TGGCCCAACAGGATCTTCTAAGCCTTTGCAACACAAAGTTTGATTCCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR TCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAAAGGGCAGGGCTGGGTaGACCGGCCTGGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQKGRAG*TGLVSC
Trigger: GCAGGAAACCAGGCCGGTTCACCCAGCCCTGCCCTT...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAAAGGGCAGGGCTGGGTaGACCGGCCTGGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLKGRAG*TGLVSC
Trigger: GCAGGAAACCAGGCCGGTTCACCCAGCCCTGCCCTT...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCCCGGCAGGGTGGAGGTaGGCCTTGCTTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSPAGWR*ALLSLK
Trigger: CTTCAGAGAAAGCAAGGCTCACCTCCACCCTGCCGG...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR GCA 90 bp CCAGCCATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCAAGTCATCGGACCACTaGTCCTCTTCGTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PAIVLRPTLLTSSYLDYIKSSDH*SSSSAG
Trigger: CCCTGCTGACGAAGAGGAGCAGTGGTCCGATGACTT...GATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAATGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR GCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCACCGGCCTGGTTTCCTaGTCTACTGGAGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVTGLVS*STGGGS
Trigger: CGAGCCGCCTCCAGTAGAGCAGGAAACCAGGCCGGT...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp CCAGCCATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCAGCATGGTAAGCCTCTaGTCTCAAGGGTTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: PAIVLRPTLLTSSYLDYISMVSL*SQGFRP
Trigger: TGGCCGGAACCCTTGAGACCAGAGGCTTACCATGCT...GATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAATGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp GGTATCTCTTTTATTCCTTGGTGTTCACCAATGTCTGCTTTTCTGCTCTTGTTTGGCGAAGGGCAGGGCTaGGTGAACCGGCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GISFIPWCSPMSAFLLLFGEGQG*VNRPGF
Trigger: GAAACCAGGCCGGTTCACCCAGCCCTGCCCTTCGCC...AAACAAGAGCAGAAAAGCAGACATTGGTGAACACCAAGGAATAAAAGAGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGGCGAAGGGCAGGGCTaGGTGAACCGGCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQGEGQG*VNRPGF
Trigger: GAAACCAGGCCGGTTCACCCAGCCCTGCCCTTCGCC...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp CACGCGGGCAGGTTTTCCCATGTTGTTGTGATAGTGAGTAAGTCTCATGAGATCGGAGGCCTTTGGGTTTaGGTGGGACTTGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: HAGRFSHVVVIVSKSHEIGGLWV*VGLEVS
Trigger: AGAAACCTCAAGTCCCACCCAAACCCAAAGGCCTCC...GATCTCATGAGACTTACTCACTATCACAACAACATGGGAAAACCTGCCCGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp TTTCAGGTGGAGGTGAACTGCTTTCTGTGGGATGAATATAGTTTTCATCATTATAAGGGCAGGGCTGGGTaGACCGGCCTGGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FQVEVNCFLWDEYSFHHYKGRAG*TGLVSC
Trigger: GCAGGAAACCAGGCCGGTTCACCCAGCCCTGCCCTT...ATAATGATGAAAACTATATTCATCCCACAGAAAGCAGTTCACCTCCACCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR TCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTATGCAGCTGGTGGAGGTaGCTTGGTTTCCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLCSWWR*LGFPGP
Trigger: GGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCA...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGTTCTTCACAAACACTTaGAGCATTCTGTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LEERRALRNLAWLIYSPWFFTNT*SILLRG
Trigger: GCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAA...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR GCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAACCGGCCTGGTTTCCTaGTCTACTGGAGGCGGCTCG +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQTGLVS*STGGGS
Trigger: CGAGCCGCCTCCAGTAGAGCAGGAAACCAGGCCGGT...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp CACGCGGGCAGGTTTTCCCATGTTGTTGTGATAGTGAGTAAGTCTCATGAGATCCGAATAACTGTCCAGTaGTCACGTCAGCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: HAGRFSHVVVIVSKSHEIRITVQ*SRQQFL
Trigger: CAGGAACTGCTGACGTGACCACTGGACAGTTATTCG...GATCTCATGAGACTTACTCACTATCACAACAACATGGGAAAACCTGCCCGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCGGTTTCCTGCTCTACTaGAGGCGGCTCGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSGFLLY*RRLVAV
Trigger: GACAGCTACGAGCCGCCTCCAGTAGAGCAGGAAACC...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCCTATATACTCGCCTCTaGCGAAGGGCAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSLYTRL*RRAGLG
Trigger: ACCCAGCCCTGCCCTTCGCCAGAGGCGAGTATATAG...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CCA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGTTGATCTATTCACCATaGGAGCTTTTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LEERRALRNLAWLIYSPWLIYSP*ELFQVE
Trigger: CTCCACCTGAAAAAGCTCCCATGGTGAATAGATCAA...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR TCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCAGCTGCCTCAACTTCTaGCTGGCGGGGACGGTTATT +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSSCLNF*LAGTVI
Trigger: AATAACCGTCCCCGCCAGTCAGAAGTTGAGGCAGCT...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAAGGGCAGGGCTGGGTaGACCGGCCTGGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVKGRAG*TGLVSC
Trigger: GCAGGAAACCAGGCCGGTTCACCCAGCCCTGCCCTT...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTGTCTGTGACTTaGCCCTCGGTGGCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSFLSVT*PSVAFS
Trigger: GCTGAACGCCACCGAGGGTCAAGTCACAGACAAGAA...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCACAGCTTCTTGTCTGTaGCTTGACCCTCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSTASCL*LDPRWR
Trigger: ACGCCACCGAGGGTCAAGTCACAGACAAGAAGCTGT...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCGGTTTCCTGCTCTACTaGAGGCGGCTCGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVGFLLY*RRLVAV
Trigger: GACAGCTACGAGCCGCCTCCAGTAGAGCAGGAAACC...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCTGGGTGAACCGGCCTaGTTTCCTGCTCTACTGGAG +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVLGEPA*FPALLE
Trigger: CTCCAGTAGAGCAGGAAACCAGGCCGGTTCACCCAG...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGGCGAAGGGCAGGGCTaGGTGAACCGGCCTGGTTTC +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVGEGQG*VNRPGF
Trigger: GAAACCAGGCCGGTTCACCCAGCCCTGCCCTTCGCC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp TCAACATACTTTCATAGATTGCTATCTTATGCAGTGGCCAAGTGTGTTCCCCATCTGGTGGAGGTGACTTaGTTTCCCAGGCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: STYFHRLLSYAVAKCVPHLVEVT*FPRPHC
Trigger: ACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAG...ATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCTGGTGGAGGTGACTTaGTTTCCCAGGCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVLVEVT*FPRPHC
Trigger: ACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAG...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCCTCAAGTCTGATTTCTaGGAGTGCAGGCTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSLKSDF*ECRLLA
Trigger: TGCCAGCAGCCTGCACTCTCAGAAATCAGACTTGAG...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCCATCACGTACATCTCTaGGTCCGAGTGCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSHHVHL*VRVLIW
Trigger: CCAGATGAGCACTCGGACTCAGAGATGTACGTGATG...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTGGAATTTGGCTTGGTTaGTCTATTCACCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: CSLACHHVKHAFASSLPSGIWLG*SIHHGS
Trigger: GCTCCCATGGTGAATAGATCAACCAAGCCAAATTCC...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCTGCAGCTGGTGGAGGTaGCTTGGTTTCCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVCSWWR*LGFPGP
Trigger: GGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCA...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCTTCTTGTCTGTGACTTaGCCCTCGGTGGCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVFLSVT*PSVAFS
Trigger: GCTGAACGCCACCGAGGGTCAAGTCACAGACAAGAA...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp TTTCTTCACAAACACTTGAAGCATTCTGTTGAGAGGCAACTGGAGTTGTCTTCAACAGCTTCTTGTCTGTaGCTTGACCCTCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: FLHKHLKHSVERQLELSSTASCL*LDPRWR
Trigger: ACGCCACCGAGGGTCAAGTCACAGACAAGAAGCTGT...TGAAGACAACTCCAGTTGCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR GCA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTTTCTTCTTTGCCTTCTaGCATGATTGTGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CSLACHHVKHAFASSLPSFFFAF*HDCEAS
Trigger: GGAGGCCTCACAATCATGGCAGAAGGCAAAGAAGAA...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR GCA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTACATGCTCTCTTGCCTaGCACCATGTAAAACATGCC +
Preference number: 4 (lower is better)
Translates to: CSLACHHVKHAFASSLPSTCSLA*HHVKHA
Trigger: GGCATGTTTTACATGGTGGCAGGCAAGAGAGCATGT...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp CTTGACCCTCGGTGGCGTTCAGCAGGTATAGGTTTTTCTTCACAAACACTTGAAGTCCGAGTGCTCATCTaGATTTTCATAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LDPRWRSAGIGFSSQTLEVRVLI*IFIVAV
Trigger: GACAGCGACTATGAAAATCCAGATGAGCACTCGGAC...TTCAAGTGTTTGTGAAGAAAAACCTATACCTGCTGAACGCCACCGAGGGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAGGTTTCCTGCTCTACTaGAGGCGGCTCGTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLGFLLY*RRLVAV
Trigger: GACAGCTACGAGCCGCCTCCAGTAGAGCAGGAAACC...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAACTGGGTGAACCGGCCTaGTTTCCTGCTCTACTGGAG +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQLGEPA*FPALLE
Trigger: CTCCAGTAGAGCAGGAAACCAGGCCGGTTCACCCAG...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAACTATATACTCGCCTCTaGCGAAGGGCAGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQLYTRL*RRAGLG
Trigger: ACCCAGCCCTGCCCTTCGCCAGAGGCGAGTATATAG...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCGGGCCCATCCACAGTTaGGTTTCCCCCTTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSGPIHS*VSPFCK
Trigger: TTTACAGAAGGGGGAAACCCAACTGTGGATGGGCCC...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGGCTCCAGCATACCATaGCTTGCAGAGAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQGSSIP*LAENAS
Trigger: GCTGGCGTTCTCTGCAAGCCATGGTATGCTGGAGCC...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp TCAACATACTTTCATAGATTGCTATCTTATGCAGTGGCCAAGTGTGTTCCCCATATGGGAGGGACCTGGTaGGAGGTAACTGAATCACGC +
Preference number: 4 (lower is better)
Translates to: STYFHRLLSYAVAKCVPHMGGTW*EVTESR
Trigger: GCGTGATTCAGTTACCTCCCACCAGGTCCCTCCCAT...ATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp GGCTTAGAAGATCCTGTTGGGCCACACTTCTGCATTCCAGGAGAGATTAAATGTCTTAGAAGATCCTGTTaGGCCACACTTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: GLEDPVGPHFCIPGEIKCLRRSC*ATLLHS
Trigger: GGAATGCAGAAGTGTGGCCCAACAGGATCTTCTAAG...ACATTTAATCTCTCCTGGAATGCAGAAGTGTGGCCCAACAGGATCTTCTAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR TCA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAACCGGCCACTCAAGTCTaGTTTCTGAGAGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKPATQV*FLRVQA
Trigger: AGCCTGCACTCTCAGAAATCAGACTTGAGTGGCCGG...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAACCGGCCACTCAAGTCTaGTTTCTGAGAGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQPATQV*FLRVQA
Trigger: AGCCTGCACTCTCAGAAATCAGACTTGAGTGGCCGG...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS-3UTR TCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAAGCTGCCTCAACTTCTaGCTGGCGGGGACGGTTATT +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLSCLNF*LAGTVI
Trigger: AATAACCGTCCCCGCCAGTCAGAAGTTGAGGCAGCT...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAAGCTGCCTCAACTTCTaGCTGGCGGGGACGGTTATT +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQSCLNF*LAGTVI
Trigger: AATAACCGTCCCCGCCAGTCAGAAGTTGAGGCAGCT...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTATGGGAAGTGTCTTGCTaGAGGGTGGGGAATGCCTCT +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLWEVSC*RVGNAS
Trigger: AGAGGCATTCCCCACCCTTCAGCAAGACACTTCCCA...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR TCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAATGGGAAGTGTCTTGCTaGAGGGTGGGGAATGCCTCT +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQWEVSC*RVGNAS
Trigger: AGAGGCATTCCCCACCCTTCAGCAAGACACTTCCCA...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR TCA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAAGAGCCTTGCTTTCTCTaGAGGCCAGCTGGGCTTACT +
Preference number: 4 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKEPCFL*RPAGLT
Trigger: AGTAAGCCCAGCTGGCCTTCAGAGAAAGCAAGGCTC...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGAGCCTTGCTTTCTCTaGAGGCCAGCTGGGCTTACT +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQEPCFL*RPAGLT
Trigger: AGTAAGCCCAGCTGGCCTTCAGAGAAAGCAAGGCTC...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR TCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAACCCACTGTTTCGACCTaGAGCTGTTCCTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQPTVST*SCSWRR
Trigger: TCTCCTCCAGGAACAGCTTCAGGTCGAAACAGTGGG...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000413476.6
CDS-3UTR TCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAACAGCTTCTTGTCTGTaGCTTGACCCTCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLTASCL*LDPRWR
Trigger: ACGCCACCGAGGGTCAAGTCACAGACAAGAAGCTGT...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAACAGCTTCTTGTCTGTaGCTTGACCCTCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQTASCL*LDPRWR
Trigger: ACGCCACCGAGGGTCAAGTCACAGACAAGAAGCTGT...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp CACGCGGGCAGGTTTTCCCATGTTGTTGTGATAGTGAGTAAGTCTCATGAGATCAGTCATGAGTTACCCTaGAATTATTACCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: HAGRFSHVVVIVSKSHEISHELP*NYYLLA
Trigger: GGCCAGAAGGTAATAATTTCAGGGTAACTCATGACT...GATCTCATGAGACTTACTCACTATCACAACAACATGGGAAAACCTGCCCGCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR GCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAAAGTCATCGGACCACTaGTCCTCTTCGTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQKSSDH*SSSSAG
Trigger: CCCTGCTGACGAAGAGGAGCAGTGGTCCGATGACTT...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR GCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAAAGTCATCGGACCACTaGTCCTCTTCGTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLKSSDH*SSSSAG
Trigger: CCCTGCTGACGAAGAGGAGCAGTGGTCCGATGACTT...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR GCA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTCAGGTGGAGGTGAACTaGTTTCTGTGGGATGAATAT +
Preference number: 4 (lower is better)
Translates to: CSLACHHVKHAFASSLPSQVEVN*FLWDEY
Trigger: ATATTCATCCCACAGAAAGCAGTTCACCTCCACCTG...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR GCA 90 bp CTTGACCCTCGGTGGCGTTCAGCAGGTATAGGTTTTTCTTCACAAACACTTGAACAGGTGGAGGTGAACTaGTTTCTGTGGGATGAATAT +
Preference number: 4 (lower is better)
Translates to: LDPRWRSAGIGFSSQTLEQVEVN*FLWDEY
Trigger: ATATTCATCCCACAGAAAGCAGTTCACCTCCACCTG...TTCAAGTGTTTGTGAAGAAAAACCTATACCTGCTGAACGCCACCGAGGGTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR GCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCAGCATACCATGGCTTaGAGAGAACGCCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVQHTMA*RERQLP
Trigger: AGGAAGCTGGCGTTCTCTGCAAGCCATGGTATGCTG...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAAGCATGGTAAGCCTCTaGTCTCAAGGGTTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQSMVSL*SQGFRP
Trigger: TGGCCGGAACCCTTGAGACCAGAGGCTTACCATGCT...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAAGCATGGTAAGCCTCTaGTCTCAAGGGTTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLSMVSL*SQGFRP
Trigger: TGGCCGGAACCCTTGAGACCAGAGGCTTACCATGCT...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp CCAGCCATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCGGTATGGGTTTTTGGTaGATTTGTTTCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAIVLRPTLLTSSYLDYIGMGFW*ICFWAG
Trigger: TCCTGCCCAGAAACAAATCCACCAAAAACCCATACC...GATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAATGGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAGCCATGGGAGGGACCTaGTGGGAGGTAACTGAATCA +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLAMGGT*WEVTES
Trigger: TGATTCAGTTACCTCCCACCAGGTCCCTCCCATGGC...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTACATCACGTACATCTCTaGGTCCGAGTGCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLHHVHL*VRVLIW
Trigger: CCAGATGAGCACTCGGACTCAGAGATGTACGTGATG...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCCTTGAAGCATTCTGTTaGGAGGCAACTGGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSLEAFC*EATGVV
Trigger: GACAACTCCAGTTGCCTCTCAACAGAATGCTTCAAG...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp CACGCGGGCAGGTTTTCCCATGTTGTTGTGATAGTGAGTAAGTCTCATGAGATCTATATATCCCATGGTTaGGAGTGCTCACAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: HAGRFSHVVVIVSKSHEIYISHG*ECSQKG
Trigger: TCCTTTTTGTGAGCACTCTCAACCATGGGATATATA...GATCTCATGAGACTTACTCACTATCACAACAACATGGGAAAACCTGCCCGCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTTTCCACTTTGAAACTTaGTATGGTTTGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: CSLACHHVKHAFASSLPSFHFET*YGLAVS
Trigger: GGACACAGCCAAACCATATCAAGTTTCAAAGTGGAA...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp CCAGCCATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCGCTGTCATTCCACTTTaGAACTTGATATGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: PAIVLRPTLLTSSYLDYIAVIPL*NLIWFG
Trigger: GCCAAACCATATCAAGTTTCAAAGTGGAATGACAGC...GATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAATGGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR GCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAACTGAAGGGTGGGGAATaGCTCTGGCTTGATCGATTG +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQLKGGE*LWLDRL
Trigger: CAATCGATCAAGCCAGAGGCATTCCCCACCCTTCAG...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR GCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTACTGAAGGGTGGGGAATaGCTCTGGCTTGATCGATTG +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLLKGGE*LWLDRL
Trigger: CAATCGATCAAGCCAGAGGCATTCCCCACCCTTCAG...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR GCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTACAGCATACCATGGCTTaGAGAGAACGCCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLQHTMA*RERQLP
Trigger: AGGAAGCTGGCGTTCTCTGCAAGCCATGGTATGCTG...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR GCA 90 bp CCAGCCATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCCCACCATGTAAAACATaGCTTTGCTTCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PAIVLRPTLLTSSYLDYIPPCKT*LCFFFA
Trigger: GGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGG...GATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAATGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCGAATAACTGTCCAGTaGTCACGTCAGCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVRITVQ*SRQQFL
Trigger: CAGGAACTGCTGACGTGACCACTGGACAGTTATTCG...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp TTTCTTCACAAACACTTGAAGCATTCTGTTGAGAGGCAACTGGAGTTGTCTTCACGAATAACTGTCCAGTaGTCACGTCAGCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FLHKHLKHSVERQLELSSRITVQ*SRQQFL
Trigger: CAGGAACTGCTGACGTGACCACTGGACAGTTATTCG...TGAAGACAACTCCAGTTGCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CCA 90 bp GTAAATTCTGATCCAGTAGTTCTAGGGTGGGGCCAAGATTCTGCATTTCTAACAGCCTCAACTTCTGACTaGCGGGGACGGTTATTTTAT +
Preference number: 4 (lower is better)
Translates to: VNSDPVVLGWGQDSAFLTASTSD*RGRLFY
Trigger: ATAAAATAACCGTCCCCGCCAGTCAGAAGTTGAGGC...TGTTAGAAATGCAGAATCTTGGCCCCACCCTAGAACTACTGGATCAGAATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCCTGGGTGAACCGGCCTaGTTTCCTGCTCTACTGGAG +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVLGEPA*FPALLE
Trigger: CTCCAGTAGAGCAGGAAACCAGGCCGGTTCACCCAG...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAATCTCTGAAGGCCAGCTaGGCTTACTGGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQSLKAS*AYWEVS
Trigger: AGACACTTCCCAGTAAGCCCAGCTGGCCTTCAGAGA...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTATCTCTGAAGGCCAGCTaGGCTTACTGGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLSLKAS*AYWEVS
Trigger: AGACACTTCCCAGTAAGCCCAGCTGGCCTTCAGAGA...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGGAGGCCTTTGGGTTTaGGTGGGACTTGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQGGLWV*VGLEVS
Trigger: AGAAACCTCAAGTCCCACCCAAACCCAAAGGCCTCC...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CCA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTTTGATCTATTCACCATaGGAGCTTTTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: CSLACHHVKHAFASSLPSLIYSP*ELFQVE
Trigger: CTCCACCTGAAAAAGCTCCCATGGTGAATAGATCAA...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCCTGGTGGAGGTGACTTaGTTTCCCAGGCCCCACTGT +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVLVEVT*FPRPHC
Trigger: ACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAG...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCCTGTTGAGAGGCAACTaGAGTTGTCTTCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSLLRGN*SCLQWC
Trigger: ACACCACTGAAGACAACTCCAGTTGCCTCTCAACAG...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAGGGCCCATCCACAGTTaGGTTTCCCCCTTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLGPIHS*VSPFCK
Trigger: TTTACAGAAGGGGGAAACCCAACTGTGGATGGGCCC...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGGCTCCAGCATACCATaGCTTGCAGAGAACGCCAGC +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVGSSIP*LAENAS
Trigger: GCTGGCGTTCTCTGCAAGCCATGGTATGCTGGAGCC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AATCAAACTTTGTGTTGCAAAGGCTTAGAAGATCCTGTTGGGCCACACTTCTGCGACATCAAGACTATTTaGAAGGGTTCCAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: NQTLCCKGLEDPVGPHFCDIKTI*KGSRKG
Trigger: CCCTTTCCTGGAACCCTTCCAAATAGTCTTGATGTC...GCAGAAGTGTGGCCCAACAGGATCTTCTAAGCCTTTGCAACACAAAGTTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
3UTR CAA 72 bp AGGTTGATGCTATCTTGCTGGGAATCAAACTTTGTGTaGCAAAGGCTTAGAAGATCCTGTTGGGCCACACTT +
Preference number: 4 (lower is better)
Translates to: RLMLSCWESNFV*QRLRRSCWATL
Trigger: AAGTGTGGCCCAACAGGATCTTCTAAGCCTTTGCAACACAAAGTTTGATTCCCAGCAAGATAGCATCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR TCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGCTGCCTCAACTTCTaGCTGGCGGGGACGGTTATT +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVSCLNF*LAGTVI
Trigger: AATAACCGTCCCCGCCAGTCAGAAGTTGAGGCAGCT...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp TTTCAGGTGGAGGTGAACTGCTTTCTGTGGGATGAATATAGTTTTCATCATTATCATCACGTACATCTCTaGGTCCGAGTGCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: FQVEVNCFLWDEYSFHHYHHVHL*VRVLIW
Trigger: CCAGATGAGCACTCGGACTCAGAGATGTACGTGATG...ATAATGATGAAAACTATATTCATCCCACAGAAAGCAGTTCACCTCCACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR TCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCGGAATGCCTCTGGCTTaGTCGATTGTCTATATACTC +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSGMPLA*SIVYIL
Trigger: GAGTATATAGACAATCGATCAAGCCAGAGGCATTCC...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR TCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGAGCCTTGCTTTCTCTaGAGGCCAGCTGGGCTTACT +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVEPCFL*RPAGLT
Trigger: AGTAAGCCCAGCTGGCCTTCAGAGAAAGCAAGGCTC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR TCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCTTTTTCAGGTGGAGGTaGACTGCTTTCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVFFRWR*TAFCGM
Trigger: CATCCCACAGAAAGCAGTTCACCTCCACCTGAAAAA...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR TCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCGGAATTTGGCTTGGTTaGTCTATTCACCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVGIWLG*SIHHGS
Trigger: GCTCCCATGGTGAATAGATCAACCAAGCCAAATTCC...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000413476.6
CDS-3UTR TCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCCCCACTGTTTCGACCTaGAGCTGTTCCTGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVPTVST*SCSWRR
Trigger: TCTCCTCCAGGAACAGCTTCAGGTCGAAACAGTGGG...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000413476.6
CDS-3UTR TCA 90 bp TCAACATACTTTCATAGATTGCTATCTTATGCAGTGGCCAAGTGTGTTCCCCATCTTGAAGCATTCTGTTaGGAGGCAACTGGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: STYFHRLLSYAVAKCVPHLEAFC*EATGVV
Trigger: GACAACTCCAGTTGCCTCTCAACAGAATGCTTCAAG...ATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCTTCTTGTCTGTGACTTaGCCCTCGGTGGCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVFLSVT*PSVAFS
Trigger: GCTGAACGCCACCGAGGGTCAAGTCACAGACAAGAA...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTAAGTCTCATGAGATCTaGTGGTTTTATAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CSLACHHVKHAFASSLPSKSHEI*WFYKGQ
Trigger: CTGCCCTTTATAAAACCATCAGATCTCATGAGACTT...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp TCAACATACTTTCATAGATTGCTATCTTATGCAGTGGCCAAGTGTGTTCCCCATCTAAGACCTTGGACCTaGTTCTCCACGATGGTATCT +
Preference number: 4 (lower is better)
Translates to: STYFHRLLSYAVAKCVPHLRPWT*FSTMVS
Trigger: AGATACCATCGTGGAGAATCAGGTCCAAGGTCTTAG...ATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp CCAGCCATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCAATAAGGTCACATTCTaGGATATGTGGCCTTATGGA +
Preference number: 4 (lower is better)
Translates to: PAIVLRPTLLTSSYLDYINKVTF*DMWPYG
Trigger: TCCATAAGGCCACATATCTCAGAATGTGACCTTATT...GATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAATGGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR GCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAAGTCATCGGACCACTaGTCCTCTTCGTCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVKSSDH*SSSSAG
Trigger: CCCTGCTGACGAAGAGGAGCAGTGGTCCGATGACTT...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR GCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCCAGGTGGAGGTGAACTaGTTTCTGTGGGATGAATAT +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSQVEVN*FLWDEY
Trigger: ATATTCATCCCACAGAAAGCAGTTCACCTCCACCTG...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGCATGGTAAGCCTCTaGTCTCAAGGGTTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVSMVSL*SQGFRP
Trigger: TGGCCGGAACCCTTGAGACCAGAGGCTTACCATGCT...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAACGAATAACTGTCCAGTaGTCACGTCAGCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQRITVQ*SRQQFL
Trigger: CAGGAACTGCTGACGTGACCACTGGACAGTTATTCG...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTACGAATAACTGTCCAGTaGTCACGTCAGCAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLRITVQ*SRQQFL
Trigger: CAGGAACTGCTGACGTGACCACTGGACAGTTATTCG...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCGCCTCAACTTCTGACTaGCGGGGACGGTTATTTTAT +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVASTSD*RGRLFY
Trigger: ATAAAATAACCGTCCCCGCCAGTCAGAAGTTGAGGC...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp TTTCTTCACAAACACTTGAAGCATTCTGTTGAGAGGCAACTGGAGTTGTCTTCAGCCTCAACTTCTGACTaGCGGGGACGGTTATTTTAT +
Preference number: 4 (lower is better)
Translates to: FLHKHLKHSVERQLELSSASTSD*RGRLFY
Trigger: ATAAAATAACCGTCCCCGCCAGTCAGAAGTTGAGGC...TGAAGACAACTCCAGTTGCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCGTCCGAGTGCTCATCTaGATTTTCATAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVVRVLI*IFIVAV
Trigger: GACAGCGACTATGAAAATCCAGATGAGCACTCGGAC...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCGGTGGGGAATGCCTCTaGCTTGATCGATTGTCTATA +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVGGECL*LDRLSI
Trigger: TATAGACAATCGATCAAGCCAGAGGCATTCCCCACC...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCTGGTGGATTTGTTTCTaGGCAGGAGGAAACACTGGT +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVWWICF*AGGNTG
Trigger: ACCAGTGTTTCCTCCTGCCCAGAAACAAATCCACCA...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCGGTATGGGTTTTTGGTaGATTTGTTTCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSGMGFW*ICFWAG
Trigger: TCCTGCCCAGAAACAAATCCACCAAAAACCCATACC...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTCACAAACACTTaGAGCATTCTGTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSFFTNT*SILLRG
Trigger: GCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAA...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTCCAAAGTACTTGTTTaGTCTGTGCAATGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSSKVLV*SVQCLF
Trigger: GAAGAGGCATTGCACAGATCAAACAAGTACTTTGGA...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp CTTGCTGGGAATCAAACTTTGTGTTGCAAAGGCTTAGAAGATCCTGTTGGGCCACTAAAATGTAAATTCTaGTCCAGTAGTTCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: LAGNQTLCCKGLEDPVGPLKCKF*SSSSRV
Trigger: CACCCTAGAACTACTGGATCAGAATTTACATTTTAG...TGGCCCAACAGGATCTTCTAAGCCTTTGCAACACAAAGTTTGATTCCCAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR GCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCCTGAAGGGTGGGGAATaGCTCTGGCTTGATCGATTG +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVLKGGE*LWLDRL
Trigger: CAATCGATCAAGCCAGAGGCATTCCCCACCCTTCAG...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR GCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCAGGTGGAGGTGAACTaGTTTCTGTGGGATGAATAT +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVQVEVN*FLWDEY
Trigger: ATATTCATCCCACAGAAAGCAGTTCACCTCCACCTG...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR GCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCCAGCATACCATGGCTTaGAGAGAACGCCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVQHTMA*RERQLP
Trigger: AGGAAGCTGGCGTTCTCTGCAAGCCATGGTATGCTG...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR GCA 90 bp TGGTGGTTTATAGCAGGGTTTCTTAAATATGATTTACATTCAGATCCCCTGGAGGTGGGGCCAAGATTCTaGATTTCTAACAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WWFIAGFLKYDLHSDPLEVGPRF*ISNKLQ
Trigger: CTGGAGCTTGTTAGAAATGCAGAATCTTGGCCCCAC...CTCCAGGGGATCTGAATGTAAATCATATTTAAGAAACCCTGCTATAAACCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR CCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAGTCCGAGTGCTCATCTaGATTTTCATAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLVRVLI*IFIVAV
Trigger: GACAGCGACTATGAAAATCCAGATGAGCACTCGGAC...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGGAGGCCTTTGGGTTTaGGTGGGACTTGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVGGLWV*VGLEVS
Trigger: AGAAACCTCAAGTCCCACCCAAACCCAAAGGCCTCC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTACTGTTGAGAGGCAACTaGAGTTGTCTTCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLLLRGN*SCLQWC
Trigger: ACACCACTGAAGACAACTCCAGTTGCCTCTCAACAG...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTATGGTGGATTTGTTTCTaGGCAGGAGGAAACACTGGT +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLWWICF*AGGNTG
Trigger: ACCAGTGTTTCCTCCTGCCCAGAAACAAATCCACCA...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCGGTATGGGTTTTTGGTaGATTTGTTTCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVGMGFW*ICFWAG
Trigger: TCCTGCCCAGAAACAAATCCACCAAAAACCCATACC...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCCCCTTCTGTAAATCTTaGCAGAGGTATGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSPFCKS*QRYGFL
Trigger: CAAAAACCCATACCTCTGCCAAGATTTACAGAAGGG...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGGGCCCATCCACAGTTaGGTTTCCCCCTTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVGPIHS*VSPFCK
Trigger: TTTACAGAAGGGGGAAACCCAACTGTGGATGGGCCC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAAGCCTCCCCAACCATGTaGAACTGTGAGTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKASPTM*NCESIK
Trigger: TTTAATGGACTCACAGTTCCACATGGTTGGGGAGGC...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTAGTATGATACATTTCTaGGATGATCTAAGACCTTGG +
Preference number: 4 (lower is better)
Translates to: CSLACHHVKHAFASSLPSSMIHF*DDLRPW
Trigger: CCAAGGTCTTAGATCATCCCAGAAATGTATCATACT...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGGAATGCCTCTGGCTTaGTCGATTGTCTATATACTC +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQGMPLA*SIVYIL
Trigger: GAGTATATAGACAATCGATCAAGCCAGAGGCATTCC...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR TCA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAAGATACATTTCTGGGATaGTCTAAGACCTTGGACCTG +
Preference number: 4 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKDTFLG*SKTLDL
Trigger: CAGGTCCAAGGTCTTAGATCATCCCAGAAATGTATC...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAGGTATGGGTTTTTGGTaGATTTGTTTCTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLGMGFW*ICFWAG
Trigger: TCCTGCCCAGAAACAAATCCACCAAAAACCCATACC...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCATCTTGGCAGAGGTATaGGTTTTTGGTGGATTTGTT +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSILAEV*VFGGFV
Trigger: AACAAATCCACCAAAAACCCATACCTCTGCCAAGAT...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCTTTTTCAGGTGGAGGTaGACTGCTTTCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVFFRWR*TAFCGM
Trigger: CATCCCACAGAAAGCAGTTCACCTCCACCTGAAAAA...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR TCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCCTTGAAGCATTCTGTTaGGAGGCAACTGGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVLEAFC*EATGVV
Trigger: GACAACTCCAGTTGCCTCTCAACAGAATGCTTCAAG...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAATTCTTCACAAACACTTaGAGCATTCTGTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKFFTNT*SILLRG
Trigger: GCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAA...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAATTCTTCACAAACACTTaGAGCATTCTGTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQFFTNT*SILLRG
Trigger: GCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAA...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCTTTGGGAAAGTGTCTaGAGCAATGGTATTGATCTT +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVLWESV*SNGIDL
Trigger: AAGATCAATACCATTGCTTCAGACACTTTCCCAAAG...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR TCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAATCCAAAGTACTTGTTTaGTCTGTGCAATGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQSKVLV*SVQCLF
Trigger: GAAGAGGCATTGCACAGATCAAACAAGTACTTTGGA...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413476.6
ENST00000427367.6
CDS-3UTR GCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCCTGCACATGCTCTCTTaGCTGCCACCATGTAAAACA +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVLHMLS*LPPCKT
Trigger: TGTTTTACATGGTGGCAGGCAAGAGAGCATGTGCAG...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR GCA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCCATACTTTCATAGATTaGTATCTTATGCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSHTFID*YLMQWP
Trigger: TGGCCACTGCATAAGATAGCAATCTATGAAAGTATG...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR GCA 90 bp ATAGCAGGGTTTCTTAAATATGATTTACATTCAGATCCCCTGGAGATCTTGCTAGTTGGGCCACACTTCTaGATTCCAGGAGAGATTAAA +
Preference number: 4 (lower is better)
Translates to: IAGFLKYDLHSDPLEILLVGPHF*IPGEIK
Trigger: TTTAATCTCTCCTGGAATGCAGAAGTGTGGCCCAAC...TAGCAAGATCTCCAGGGGATCTGAATGTAAATCATATTTAAGAAACCCTGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGCCTCAACTTCTGACTaGCGGGGACGGTTATTTTAT +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVASTSD*RGRLFY
Trigger: ATAAAATAACCGTCCCCGCCAGTCAGAAGTTGAGGC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGGTGGGGAATGCCTCTaGCTTGATCGATTGTCTATA +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVGGECL*LDRLSI
Trigger: TATAGACAATCGATCAAGCCAGAGGCATTCCCCACC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCCTGTTGAGAGGCAACTaGAGTTGTCTTCAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVLLRGN*SCLQWC
Trigger: ACACCACTGAAGACAACTCCAGTTGCCTCTCAACAG...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCTGGTGGATTTGTTTCTaGGCAGGAGGAAACACTGGT +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVWWICF*AGGNTG
Trigger: ACCAGTGTTTCCTCCTGCCCAGAAACAAATCCACCA...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCATCTTGGCAGAGGTATaGGTTTTTGGTGGATTTGTT +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVILAEV*VFGGFV
Trigger: AACAAATCCACCAAAAACCCATACCTCTGCCAAGAT...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAACCCTTCTGTAAATCTTaGCAGAGGTATGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKPFCKS*QRYGFL
Trigger: CAAAAACCCATACCTCTGCCAAGATTTACAGAAGGG...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAACCCTTCTGTAAATCTTaGCAGAGGTATGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQPFCKS*QRYGFL
Trigger: CAAAAACCCATACCTCTGCCAAGATTTACAGAAGGG...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAAGGTTGTTTGGAATCATaGCCAGAGCTTTTCCGAATA +
Preference number: 4 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKGCLES*PELFRI
Trigger: TATTCGGAAAAGCTCTGGCCATGATTCCAAACAACC...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAAAACAGCCATACAGGATaGAATCACGCCAGTAGTATT +
Preference number: 4 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKNSHTG*NHASSI
Trigger: AATACTACTGGCGTGATTCCATCCTGTATGGCTGTT...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp GTAAATTCTGATCCAGTAGTTCTAGGGTGGGGCCAAGATTCTGCATTTCTAACATTGATGCTATCTTGCTaGGAATCAAACTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: VNSDPVVLGWGQDSAFLTLMLSC*ESNFVL
Trigger: CAACACAAAGTTTGATTCCCAGCAAGATAGCATCAA...TGTTAGAAATGCAGAATCTTGGCCCCACCCTAGAACTACTGGATCAGAATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495266.1
3UTR CAA 72 bp TTATTACCTTCTGGCCTTTCAACATACTTTCATAGATaGCTATCTTATGCAGTGGCCAAGTGTGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LLPSGLSTYFHR*LSYAVAKCVPH
Trigger: ATGGGGAACACACTTGGCCACTGCATAAGATAGCAATCTATGAAAGTATGTTGAAAGGCCAGAAGGTAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGGAATGCCTCTGGCTTaGTCGATTGTCTATATACTC +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVGMPLA*SIVYIL
Trigger: GAGTATATAGACAATCGATCAAGCCAGAGGCATTCC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR TCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAACCCAAATCTCATCTTaGATTGTAGCTCCCATAATC +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQTQISS*IVAPII
Trigger: GATTATGGGAGCTACAATTCAAGATGAGATTTGGGT...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR GCA 90 bp GGTATCTCTTTTATTCCTTGGTGTTCACCAATGTCTGCTTTTCTGCTCTTGTTTTGTAAAACATGCCTTTaGTTCTTCTTTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GISFIPWCSPMSAFLLLFCKTCL*FFFAFC
Trigger: GCAGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACA...AAACAAGAGCAGAAAAGCAGACATTGGTGAACACCAAGGAATAAAAGAGATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR GCA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAAGCTTTATCACTTCACTaGTGTCTGAAGTACACAGTA +
Preference number: 4 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKALSLH*CLKYTV
Trigger: TACTGTGTACTTCAGACAGCAGTGAAGTGATAAAGC...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR GCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAATAGTCTTCTCTCTGTaGCTGCATCCAAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQIVFSL*LHPNFL
Trigger: TAGGAAATTTGGATGCAGGCACAGAGAGAAGACTAT...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR GCA 90 bp AACAAGCTCCAGATGAGGTTGATGCTATCTTGCTGGGAATCAAACTTTGTGTTGAATCAAACTTTGTGTTaGAAAGGCTTAGAAGATCCT +
Preference number: 4 (lower is better)
Translates to: NKLQMRLMLSCWESNFVLNQTLC*KGLEDP
Trigger: AGGATCTTCTAAGCCTTTGCAACACAAAGTTTGATT...CAACACAAAGTTTGATTCCCAGCAAGATAGCATCAACCTCATCTGGAGCTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR CCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAATCTTGGCAGAGGTATaGGTTTTTGGTGGATTTGTT +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQILAEV*VFGGFV
Trigger: AACAAATCCACCAAAAACCCATACCTCTGCCAAGAT...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GGTATCTCTTTTATTCCTTGGTGTTCACCAATGTCTGCTTTTCTGCTCTTGTTTGTGTATATGGTTGTTTaGAATCATGGCCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: GISFIPWCSPMSAFLLLFVYMVV*NHGQSF
Trigger: AAAGCTCTGGCCATGATTCCAAACAACCATATACAC...AAACAAGAGCAGAAAAGCAGACATTGGTGAACACCAAGGAATAAAAGAGATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAGTGTATATGGTTGTTTaGAATCATGGCCAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLVYMVV*NHGQSF
Trigger: AAAGCTCTGGCCATGATTCCAAACAACCATATACAC...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS-3UTR CCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCTGCATACTTCAGTCTaGTGGAATCTTTTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVLHTSV*WNLLCY
Trigger: ATAACACAAAAGATTCCACCAGACTGAAGTATGCAG...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GGTATCTCTTTTATTCCTTGGTGTTCACCAATGTCTGCTTTTCTGCTCTTGTTTCCTGATTCTCCACGATaGTATCTCTTTTATTCCTTG +
Preference number: 4 (lower is better)
Translates to: GISFIPWCSPMSAFLLLFPDSPR*YLFYSL
Trigger: CAAGGAATAAAAGAGATACCATCGTGGAGAATCAGG...AAACAAGAGCAGAAAAGCAGACATTGGTGAACACCAAGGAATAAAAGAGATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCTGCTATCTTATGCAGTaGCCAAGTGTGTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVCYLMQ*PSVFPI
Trigger: AATGGGGAACACACTTGGCCACTGCATAAGATAGCA...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR TCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCTTCTTCACAAACACTTaGAGCATTCTGTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVFFTNT*SILLRG
Trigger: GCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAA...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR GCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAGGCATATTGTTTTGTTaGTTCAATAAATCGCACAGG +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLGILFC*FNKSHR
Trigger: CCTGTGCGATTTATTGAAGCAACAAAACAATATGCC...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS-3UTR GCA 90 bp ATAGCAGGGTTTCTTAAATATGATTTACATTCAGATCCCCTGGAGATCTTGCTAAGGTTGATGCTATCTTaGTGGGAATCAAACTTTGTG +
Preference number: 4 (lower is better)
Translates to: IAGFLKYDLHSDPLEILLRLMLS*WESNFV
Trigger: CACAAAGTTTGATTCCCAGCAAGATAGCATCAACCT...TAGCAAGATCTCCAGGGGATCTGAATGTAAATCATATTTAAGAAACCCTGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCTTGATCTATTCACCATaGGAGCTTTTTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVLIYSP*ELFQVE
Trigger: CTCCACCTGAAAAAGCTCCCATGGTGAATAGATCAA...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000413476.6
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCCCCTTCTGTAAATCTTaGCAGAGGTATGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVPFCKS*QRYGFL
Trigger: CAAAAACCCATACCTCTGCCAAGATTTACAGAAGGG...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGGTTGTTTGGAATCATaGCCAGAGCTTTTCCGAATA +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVGCLES*PELFRI
Trigger: TATTCGGAAAAGCTCTGGCCATGATTCCAAACAACC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS-3UTR CCA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCATACTTCAGTCTGGTaGAATCTTTTGTGTTATTCT +
Preference number: 4 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVHTSVW*NLLCYS
Trigger: AGAATAACACAAAAGATTCCACCAGACTGAAGTATG...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAACTGCATACTTCAGTCTaGTGGAATCTTTTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQLHTSV*WNLLCY
Trigger: ATAACACAAAAGATTCCACCAGACTGAAGTATGCAG...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CCA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAACATACTTCAGTCTGGTaGAATCTTTTGTGTTATTCT +
Preference number: 4 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKHTSVW*NLLCYS
Trigger: AGAATAACACAAAAGATTCCACCAGACTGAAGTATG...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CCA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTACATACTTCAGTCTGGTaGAATCTTTTGTGTTATTCT +
Preference number: 4 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLHTSVW*NLLCYS
Trigger: AGAATAACACAAAAGATTCCACCAGACTGAAGTATG...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR GCA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGGCATATTGTTTTGTTaGTTCAATAAATCGCACAGG +
Preference number: 4 (lower is better)
Translates to: NISSMITQPHQILTVHQVGILFC*FNKSHR
Trigger: CCTGTGCGATTTATTGAAGCAACAAAACAATATGCC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS CCA 90 bp GGCGAAGGGCAGGGCTGGGTGAACCGGCCTGGTTTCCTGCTCTACTaGAGGCGGCTCGTAGCTGTCATCAGCGTTCTCCTCGGCGGGCAT +
Preference number: 5 (lower is better)
Translates to: GEGQGWVNRPGFLLY*RRLVAVISVLLGGH
Trigger: ATGCCCGCCGAGGAGAACGCTGATGACAGCTACGAGCCGCCTCCAGTAGAGCAGGAAACCAGGCCGGTTCACCCAGCCCTGCCCTTCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
ENST00000467799.6
CDS CCA 90 bp TCCCGGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTTaGTTTCCCAGGCCCCACTGTTTCGACCTGAAGCTGTTCCTCTGG +
Preference number: 5 (lower is better)
Translates to: SRPVATGMVQLVEVT*FPRPHCFDLKLFLW
Trigger: CCAGAGGAACAGCTTCAGGTCGAAACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427367.6
CDS TCA 90 bp CAAAGCAGTCAGGGCCGGCAGGGTGGAGGTGAGCCTTGCTTTCTCTaGAGGCCAGCTGGGCTTACTGGGAAGTGTCTTGCTGAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: QSSQGRQGGGEPCFL*RPAGLTGKCLAEGW
Trigger: CCACCCTTCAGCAAGACACTTCCCAGTAAGCCCAGCTGGCCTTCAGAGAAAGCAAGGCTCACCTCCACCCTGCCGGCCCTGACTGCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS CCA 90 bp TCCCGGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTTaGTTTCCCAGGCCCCACTGTTTCGACCTGCACAAACATATACAC +
Preference number: 5 (lower is better)
Translates to: SRPVATGMVQLVEVT*FPRPHCFDLHKHIH
Trigger: GTGTATATGTTTGTGCAGGTCGAAACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468252.1
CDS TCA 90 bp GGACTTGAGGTTTCTGCAAAGCAGTCAGGGCCGGCAGGGTGGAGGTaGGCCTTGCTTTCTCTGAAGGCCAGCTGGGCTTACTGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: GLEVSAKQSGPAGWR*ALLSLKASWAYWEV
Trigger: CACTTCCCAGTAAGCCCAGCTGGCCTTCAGAGAAAGCAAGGCTCACCTCCACCCTGCCGGCCCTGACTGCTTTGCAGAAACCTCAAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS CCA 90 bp CGGGGACCACATAATCAGCCTCATCCTCAAGGAGGCCTTTGGGTTTaGGTGGGACTTGAGGTTTCTGCAAAGCAGTCAGGGCCGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RGPHNQPHPQGGLWV*VGLEVSAKQSGPAG
Trigger: CCCTGCCGGCCCTGACTGCTTTGCAGAAACCTCAAGTCCCACCCAAACCCAAAGGCCTCCTTGAGGATGAGGCTGATTATGTGGTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS CCA 90 bp GACCACATAATCAGCCTCATCCTCAAGGAGGCCTTTGGGTTTGGGTaGGACTTGAGGTTTCTGCAAAGCAGTCAGGGCCGGCAGGGTGGA +
Preference number: 5 (lower is better)
Translates to: DHIISLILKEAFGFG*DLRFLQSSQGRQGG
Trigger: TCCACCCTGCCGGCCCTGACTGCTTTGCAGAAACCTCAAGTCCCACCCAAACCCAAAGGCCTCCTTGAGGATGAGGCTGATTATGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS TCA 90 bp GTAAGCCTCTGGTCTCAAGGGTTCCGGCCACTCAAGTCTGATTTCTaGGAGTGCAGGCTGCTGGCAAACACCCCTGCTCTAGGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: VSLWSQGFRPLKSDF*ECRLLANTPALGRS
Trigger: ACTTCTCCCTAGAGCAGGGGTGTTTGCCAGCAGCCTGCACTCTCAGAAATCAGACTTGAGTGGCCGGAACCCTTGAGACCAGAGGCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000467799.6
CDS GCA 90 bp GGCCAGCTGGGCTTACTGGGAAGTGTCTTGCTGAAGGGTGGGGAATaGCTCTGGCTTGATCGATTGTCTATATACTCGCCTCTGGCGAAG +
Preference number: 5 (lower is better)
Translates to: GQLGLLGSVLLKGGE*LWLDRLSIYSPLAK
Trigger: CTTCGCCAGAGGCGAGTATATAGACAATCGATCAAGCCAGAGGCATTCCCCACCCTTCAGCAAGACACTTCCCAGTAAGCCCAGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS-3UTR CAA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGGAGGAGAGGCGGGCGTaGAGGAATTTGGCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: LEERRALRNLAWLIYSPWEERRA*RNLAWL
Trigger: CAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTC...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS GCA 90 bp GGGAAGGGCTATGATACACAGAGATGGGTTGTCACTGATGCTGTCTaGCCAACCAGCCAAAGAAGCACACACTGTGGCCCAGGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: GKGYDTQRWVVTDAV*PTSQRSTHCGPGEK
Trigger: TTTCTCCCCTGGGCCACAGTGTGTGCTTCTTTGGCTGGTTGGGCAGACAGCATCAGTGACAACCCATCTCTGTGTATCATAGCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS-3UTR CAA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGCTTCTTGTCTGTGACTaGACCCTCGGTGGCGTTCAG +
Preference number: 5 (lower is better)
Translates to: LEERRALRNLAWLIYSPWLLVCD*TLGGVQ
Trigger: CTGAACGCCACCGAGGGTCAAGTCACAGACAAGAAG...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS TCA 90 bp GTAGCTGTCATCAGCGTTCTCCTCGGCGGGCATCACGTACATCTCTaGGTCCGAGTGCTCATCTGGATTTTCATAGTCGCTGTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: VAVISVLLGGHHVHL*VRVLIWIFIVAVKV
Trigger: GACTTTGACAGCGACTATGAAAATCCAGATGAGCACTCGGACTCAGAGATGTACGTGATGCCCGCCGAGGAGAACGCTGATGACAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
ENST00000467799.6
CDS TCA 90 bp GTCATGGATCTGTGCACTTGCCAGTCTGTTGATGTGGTTGTGCTATaGGGACCAGGACTCCCTCCCAGCAGTGTTACAGGTACATCCTAC +
Preference number: 5 (lower is better)
Translates to: VMDLCTCQSVDVVVL*GPGLPPSSVTGTSY
Trigger: GTAGGATGTACCTGTAACACTGCTGGGAGGGAGTCCTGGTCCTCATAGCACAACCACATCAACAGACTGGCAAGTGCACAGATCCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485193.1
CDS TCA 90 bp TTCTGGGCAGGAGGAAACACTGGTGACTGCACAGCTTCTTGTCTGTaGCTTGACCCTCGGTGGCGTTCAGCAGGTATAGGTTTTTCTGGA +
Preference number: 5 (lower is better)
Translates to: FWAGGNTGDCTASCL*LDPRWRSAGIGFSG
Trigger: TCCAGAAAAACCTATACCTGCTGAACGCCACCGAGGGTCAAGTCACAGACAAGAAGCTGTGCAGTCACCAGTGTTTCCTCCTGCCCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485193.1
CDS-3UTR CAA 90 bp CACGCGGGCAGGTTTTCCCATGTTGTTGTGATAGTGAGTAAGTCTCATGAGATCCCAGCATACCATGGCTaGCAGAGAACGCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: HAGRFSHVVVIVSKSHEIPAYHG*QRTPAS
Trigger: GGAAGCTGGCGTTCTCTGCAAGCCATGGTATGCTGG...GATCTCATGAGACTTACTCACTATCACAACAACATGGGAAAACCTGCCCGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS TCA 90 bp GAAGCGAGGGCAGCTGAAGAGAACTACCCAGGTGCTTTCATAATGTaGGATGGGAAGATTAAAGCATGGAAGAGGAAGGGGAAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: EARAAEENYPGAFIM*DGKIKAWKRKGKAG
Trigger: CCCTGCCTTCCCCTTCCTCTTCCATGCTTTAATCTTCCCATCTCACATTATGAAAGCACCTGGGTAGTTCTCTTCAGCTGCCCTCGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS CCA 90 bp CAACCAGCCAAAGAAGCACACACTGTGGCCCAGGGGAGAAAGTCCTaGGCACTGTCATTTCTGAGCCTCTTAGTGCTTACTACCAAATAC +
Preference number: 5 (lower is better)
Translates to: QPAKEAHTVAQGRKS*ALSFLSLLVLTTKY
Trigger: GTATTTGGTAGTAAGCACTAAGAGGCTCAGAAATGACAGTGCCCAGGACTTTCTCCCCTGGGCCACAGTGTGTGCTTCTTTGGCTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS CCA 90 bp GTTACTGAGATGTCATGGATCTGTGCACTTGCCAGTCTGTTGATGTaGTTGTGCTATGAGGACCAGGACTCCCTCCCAGCAGTGTTACAG +
Preference number: 5 (lower is better)
Translates to: VTEMSWICALASLLM*LCYEDQDSLPAVLQ
Trigger: CTGTAACACTGCTGGGAGGGAGTCCTGGTCCTCATAGCACAACCACATCAACAGACTGGCAAGTGCACAGATCCATGACATCTCAGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485193.1
CDS TCA 90 bp TTGCTTTCTCTGAAGGCCAGCTGGGCTTACTGGGAAGTGTCTTGCTaGAGGGTGGGGAATGCCTCTGGCTTGATCGATTGTCTATATACT +
Preference number: 5 (lower is better)
Translates to: LLSLKASWAYWEVSC*RVGNASGLIDCLYT
Trigger: AGTATATAGACAATCGATCAAGCCAGAGGCATTCCCCACCCTTCAGCAAGACACTTCCCAGTAAGCCCAGCTGGCCTTCAGAGAAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS-3UTR CAA 90 bp CACGCGGGCAGGTTTTCCCATGTTGTTGTGATAGTGAGTAAGTCTCATGAGATCTTACTGGGAAGTGTCTaGCTGAAGGGTGGGGAATGC +
Preference number: 5 (lower is better)
Translates to: HAGRFSHVVVIVSKSHEILLGSV*LKGGEC
Trigger: GCATTCCCCACCCTTCAGCAAGACACTTCCCAGTAA...GATCTCATGAGACTTACTCACTATCACAACAACATGGGAAAACCTGCCCGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp GAGGAAACACTGGTGACTGCACAGCTTCTTGTCTGTGACTTGACCCTCGGTGGCGTTGAGGAATTTGGCTaGGTTGATCTATTCACCATG +
Preference number: 5 (lower is better)
Translates to: EETLVTAQLLVCDLTLGGVEEFG*VDLFTM
Trigger: CATGGTGAATAGATCAACCAAGCCAAATTCCTCAAC...GCCACCGAGGGTCAAGTCACAGACAAGAAGCTGTGCAGTCACCAGTGTTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CAA 90 bp AGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGGAGCTTTTTGAGAGGCAACTGGAGTaGTCTTCAGTGGTGTCGTTG +
Preference number: 5 (lower is better)
Translates to: RRALRNLAWLIYSPWELFERQLE*SSVVSL
Trigger: CAACGACACCACTGAAGACAACTCCAGTTGCCTCTC...AAAAAGCTCCCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CAA 90 bp CTGGAGGAGAGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGGCTTGTCCATTCTGTTaGGTAATTGTAAGAGACACG +
Preference number: 5 (lower is better)
Translates to: LEERRALRNLAWLIYSPWACPFC*VIVRDT
Trigger: CGTGTCTCTTACAATTACCAAACAGAATGGACAAGC...CCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CAA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCCCAGCATACCATGGCTaGCAGAGAACGCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSPAYHG*QRTPAS
Trigger: GGAAGCTGGCGTTCTCTGCAAGCCATGGTATGCTGG...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCGAGGAGAGGCGGGCGTaGAGGAATTTGGCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVEERRA*RNLAWL
Trigger: CAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTC...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000413476.6
CDS-3UTR CAA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCCAGCATACCATGGCTaGCAGAGAACGCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVPAYHG*QRTPAS
Trigger: GGAAGCTGGCGTTCTCTGCAAGCCATGGTATGCTGG...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS CCA 90 bp GATCAGAAGTCTTCCCGGGAACATGTCTTAGTTACTGAGATGTCATaGATCTGTGCACTTGCCAGTCTGTTGATGTGGTTGTGCTATGAG +
Preference number: 5 (lower is better)
Translates to: DQKSSREHVLVTEMS*ICALASLLMWLCYE
Trigger: CTCATAGCACAACCACATCAACAGACTGGCAAGTGCACAGATCCATGACATCTCAGTAACTAAGACATGTTCCCGGGAAGACTTCTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485193.1
CDS CCA 90 bp TTCTGCATTCCAGGAGAGATTAAATGTTCTGACATCAAGACTATTTaGAAGGGTTCCAGGAAAGGGAGCAGGTGTCTGAAGCGTAGTCCC +
Preference number: 5 (lower is better)
Translates to: FCIPGEIKCSDIKTI*KGSRKGSRCLKRSP
Trigger: GGGACTACGCTTCAGACACCTGCTCCCTTTCCTGGAACCCTTCCAAATAGTCTTGATGTCAGAACATTTAATCTCTCCTGGAATGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR CAA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTACTGGGAAGTGTCTaGCTGAAGGGTGGGGAATGC +
Preference number: 5 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSLLGSV*LKGGEC
Trigger: GCATTCCCCACCCTTCAGCAAGACACTTCCCAGTAA...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CAA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCGGGTTTGGGTGGGACTaGAGGTTTCTGCAAAGCAGT +
Preference number: 5 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSGFGWD*RFLQSS
Trigger: ACTGCTTTGCAGAAACCTCAAGTCCCACCCAAACCC...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CAA 90 bp AGGCGGGCGTTGAGGAATTTGGCTTGGTTGATCTATTCACCATGGGAGCTTTTTAGGAATTTGGCTTGGTaGATCTATTCACCATGGGAG +
Preference number: 5 (lower is better)
Translates to: RRALRNLAWLIYSPWELFRNLAW*IYSPWE
Trigger: CTCCCATGGTGAATAGATCAACCAAGCCAAATTCCT...AAAAAGCTCCCATGGTGAATAGATCAACCAAGCCAAATTCCTCAACGCCCGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CAA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTCGGGCGTTGAGGAATTaGGCTTGGTTGATCTATTCA +
Preference number: 5 (lower is better)
Translates to: CSLACHHVKHAFASSLPSRALRN*AWLIYS
Trigger: TGAATAGATCAACCAAGCCAAATTCCTCAACGCCCG...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAAGAGGAGAGGCGGGCGTaGAGGAATTTGGCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKEERRA*RNLAWL
Trigger: CAACCAAGCCAAATTCCTCAACGCCCGCCTCTCCTC...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCTTCTTGTCTGTGACTaGACCCTCGGTGGCGTTCAG +
Preference number: 5 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVLLVCD*TLGGVQ
Trigger: CTGAACGCCACCGAGGGTCAAGTCACAGACAAGAAG...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCGAGAGGCAACTGGAGTaGTCTTCAGTGGTGTCGTTG +
Preference number: 5 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVERQLE*SSVVSL
Trigger: CAACGACACCACTGAAGACAACTCCAGTTGCCTCTC...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAACTTCTTGTCTGTGACTaGACCCTCGGTGGCGTTCAG +
Preference number: 5 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQLLVCD*TLGGVQ
Trigger: CTGAACGCCACCGAGGGTCAAGTCACAGACAAGAAG...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAGGGTTTGGGTGGGACTaGAGGTTTCTGCAAAGCAGT +
Preference number: 5 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLGFGWD*RFLQSS
Trigger: ACTGCTTTGCAGAAACCTCAAGTCCCACCCAAACCC...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CAA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCGGGTTTTTGGTGGATTaGTTTCTGGGCAGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSGFLVD*FLGRRK
Trigger: TTTCCTCCTGCCCAGAAACAAATCCACCAAAAACCC...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCCAGAGGTATGGGTTTTaGGTGGATTTGTTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSQRYGF*VDLFLG
Trigger: GCCCAGAAACAAATCCACCAAAAACCCATACCTCTG...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCCCAGCATACCATGGCTaGCAGAGAACGCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: NISSMITQPHQILTVHQVPAYHG*QRTPAS
Trigger: GGAAGCTGGCGTTCTCTGCAAGCCATGGTATGCTGG...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTAGAAATGATCCATCCTaGTTTGATCTGTGCAATGCC +
Preference number: 5 (lower is better)
Translates to: CSLACHHVKHAFASSLPSRNDPS*FDLCNA
Trigger: GGCATTGCACAGATCAAACAAGGATGGATCATTTCT...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCTTAATTGTCAAGCATaGGCAGTGGAGAGCCCAGCT +
Preference number: 5 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVLNCQA*AVESPA
Trigger: AGCTGGGCTCTCCACTGCCAATGCTTGACAATTAAG...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp CACGCGGGCAGGTTTTCCCATGTTGTTGTGATAGTGAGTAAGTCTCATGAGATCTGCTGTCATTCCACTTaGAAACTTGATATGGTTTGG +
Preference number: 5 (lower is better)
Translates to: HAGRFSHVVVIVSKSHEICCHST*KLDMVW
Trigger: CCAAACCATATCAAGTTTCAAAGTGGAATGACAGCA...GATCTCATGAGACTTACTCACTATCACAACAACATGGGAAAACCTGCCCGCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp GGCTTAGAAGATCCTGTTGGGCCACACTTCTGCATTCCAGGAGAGATTAAATGTGAGGTTGATGCTATCTaGCTGGGAATCAAACTTTGT +
Preference number: 5 (lower is better)
Translates to: GLEDPVGPHFCIPGEIKCEVDAI*LGIKLC
Trigger: ACAAAGTTTGATTCCCAGCAAGATAGCATCAACCTC...ACATTTAATCTCTCCTGGAATGCAGAAGTGTGGCCCAACAGGATCTTCTAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR CAA 90 bp TTCTGCATTTCTAACAAGCTCCAGATGAGGTTGATGCTATCTTGCTGGGAATCAAAGCTCCAGATGAGGTaGATGCTATCTTGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: FCISNKLQMRLMLSCWESKLQMR*MLSCWE
Trigger: TTCCCAGCAAGATAGCATCAACCTCATCTGGAGCTT...TGATTCCCAGCAAGATAGCATCAACCTCATCTGGAGCTTGTTAGAAATGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR CAA 90 bp TTTCTTCACAAACACTTGAAGCATTCTGTTGAGAGGCAACTGGAGTTGTCTTCACGGGCGTTGAGGAATTaGGCTTGGTTGATCTATTCA +
Preference number: 5 (lower is better)
Translates to: FLHKHLKHSVERQLELSSRALRN*AWLIYS
Trigger: TGAATAGATCAACCAAGCCAAATTCCTCAACGCCCG...TGAAGACAACTCCAGTTGCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CAA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTTTTCTTCACAAACACTaGAAGCATTCTGTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: CSLACHHVKHAFASSLPSFLHKH*KHSVER
Trigger: CCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp CTTGACCCTCGGTGGCGTTCAGCAGGTATAGGTTTTTCTTCACAAACACTTGAATTTCTTCACAAACACTaGAAGCATTCTGTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: LDPRWRSAGIGFSSQTLEFLHKH*KHSVER
Trigger: CCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA...TTCAAGTGTTTGTGAAGAAAAACCTATACCTGCTGAACGCCACCGAGGGTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CAA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCGGGTTTTTGGTGGATTaGTTTCTGGGCAGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVGFLVD*FLGRRK
Trigger: TTTCCTCCTGCCCAGAAACAAATCCACCAAAAACCC...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp CACGCGGGCAGGTTTTCCCATGTTGTTGTGATAGTGAGTAAGTCTCATGAGATCACCATTACATCCTTCTaGCCTATACTTACAGATATC +
Preference number: 5 (lower is better)
Translates to: HAGRFSHVVVIVSKSHEITITSF*PILTDI
Trigger: GATATCTGTAAGTATAGGCAAGAAGGATGTAATGGT...GATCTCATGAGACTTACTCACTATCACAACAACATGGGAAAACCTGCCCGCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTATATATATCCCATGGTaGAGAGTGCTCACAAAAAGG +
Preference number: 5 (lower is better)
Translates to: CSLACHHVKHAFASSLPSIYIPW*RVLTKR
Trigger: CCTTTTTGTGAGCACTCTCAACCATGGGATATATAT...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp TGCTCTCTTGCCTGCCACCATGTAAAACATGCCTTTGCTTCTTCTTTGCCTTCTACATACTTTCATAGATaGCTATCTTATGCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: CSLACHHVKHAFASSLPSTYFHR*LSYAVA
Trigger: GGCCACTGCATAAGATAGCAATCTATGAAAGTATGT...AGAAGGCAAAGAAGAAGCAAAGGCATGTTTTACATGGTGGCAGGCAAGAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS GCA 90 bp ACTTTGTGTTGCAAAGGCTTAGAAGATCCTGTTGGGCCACACTTCTaGATTCCAGGAGAGATTAAATGTTCTGACATCAAGACTATTTGG +
Preference number: 5 (lower is better)
Translates to: TLCCKGLEDPVGPHF*IPGEIKCSDIKTIW
Trigger: CCAAATAGTCTTGATGTCAGAACATTTAATCTCTCCTGGAATGCAGAAGTGTGGCCCAACAGGATCTTCTAAGCCTTTGCAACACAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR CAA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCGCTTGTCCATTCTGTTaGGTAATTGTAAGAGACACG +
Preference number: 5 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSACPFC*VIVRDT
Trigger: CGTGTCTCTTACAATTACCAAACAGAATGGACAAGC...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCGGGAATGCCTCTGGCTaGATCGATTGTCTATATACT +
Preference number: 5 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVGNASG*IDCLYT
Trigger: AGTATATAGACAATCGATCAAGCCAGAGGCATTCCC...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CAA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCGTTGAGGAATTTGGCTaGGTTGATCTATTCACCATG +
Preference number: 5 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSVEEFG*VDLFTM
Trigger: CATGGTGAATAGATCAACCAAGCCAAATTCCTCAAC...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000413476.6
CDS-3UTR CAA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGAGAGGCAACTGGAGTaGTCTTCAGTGGTGTCGTTG +
Preference number: 5 (lower is better)
Translates to: NISSMITQPHQILTVHQVERQLE*SSVVSL
Trigger: CAACGACACCACTGAAGACAACTCCAGTTGCCTCTC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp GGTATCTCTTTTATTCCTTGGTGTTCACCAATGTCTGCTTTTCTGCTCTTGTTTGGGTTTTTGGTGGATTaGTTTCTGGGCAGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: GISFIPWCSPMSAFLLLFGFLVD*FLGRRK
Trigger: TTTCCTCCTGCCCAGAAACAAATCCACCAAAAACCC...AAACAAGAGCAGAAAAGCAGACATTGGTGAACACCAAGGAATAAAAGAGATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAGGGTTTTTGGTGGATTaGTTTCTGGGCAGGAGGAAA +
Preference number: 5 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLGFLVD*FLGRRK
Trigger: TTTCCTCCTGCCCAGAAACAAATCCACCAAAAACCC...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTACAGAGGTATGGGTTTTaGGTGGATTTGTTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLQRYGF*VDLFLG
Trigger: GCCCAGAAACAAATCCACCAAAAACCCATACCTCTG...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAACAGAGGTATGGGTTTTaGGTGGATTTGTTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQQRYGF*VDLFLG
Trigger: GCCCAGAAACAAATCCACCAAAAACCCATACCTCTG...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCATGATCCATCCTTGTTaGATCTGTGCAATGCCTCTT +
Preference number: 5 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSMIHPC*ICAMPL
Trigger: AAGAGGCATTGCACAGATCAAACAAGGATGGATCAT...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS-3UTR CAA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCAGAAATGATCCATCCTaGTTTGATCTGTGCAATGCC +
Preference number: 5 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSRNDPS*FDLCNA
Trigger: GGCATTGCACAGATCAAACAAGGATGGATCATTTCT...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS-3UTR CAA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCGCTTGTCCATTCTGTTaGGTAATTGTAAGAGACACG +
Preference number: 5 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVACPFC*VIVRDT
Trigger: CGTGTCTCTTACAATTACCAAACAGAATGGACAAGC...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAATCATGGACCATCTTTaGAAGCTGCCTCAACTTCTG +
Preference number: 5 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQIMDHL*KLPQLL
Trigger: CAGAAGTTGAGGCAGCTTCAAAAGATGGTCCATGAT...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAGGGAATGCCTCTGGCTaGATCGATTGTCTATATACT +
Preference number: 5 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLGNASG*IDCLYT
Trigger: AGTATATAGACAATCGATCAAGCCAGAGGCATTCCC...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CAA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTTCTTCACAAACACTaGAAGCATTCTGTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSFLHKH*KHSVER
Trigger: CCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCGTCTGGTGGAATCTTTaGTGTTATTCTGACTGTCAA +
Preference number: 5 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSVWWNL*CYSDCQ
Trigger: TTGACAGTCAGAATAACACAAAAGATTCCACCAGAC...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp TCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCCAAAGTACTTGTTaGATCTGTGCAATGCCTCTT +
Preference number: 5 (lower is better)
Translates to: SPDINSSSGQAIEQVHMSFQSTC*ICAMPL
Trigger: AAGAGGCATTGCACAGATCAAACAAGTACTTTGGAA...GCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413476.6
ENST00000427367.6
CDS TCA 90 bp TTCAGGTGCTTAAGGCGACAAACTCTTACCTTTTTCAGGTGGAGGTaGACTGCTTTCTGTGGGATGAATATAGTTTTCATCATTATCTTC +
Preference number: 5 (lower is better)
Translates to: FRCLRRQTLTFFRWR*TAFCGMNIVFIIIF
Trigger: GAAGATAATGATGAAAACTATATTCATCCCACAGAAAGCAGTTCACCTCCACCTGAAAAAGGTAAGAGTTTGTCGCCTTAAGCACCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS TCA 90 bp GGACTGAAACCTGAATATGGCTACCATGGAGTTGAGAGTAGTAGATaGGTAATGTTACCTGAAGAGGTATCACTTGTACTGGATCATATT +
Preference number: 5 (lower is better)
Translates to: GLKPEYGYHGVESSR*VMLPEEVSLVLDHI
Trigger: AATATGATCCAGTACAAGTGATACCTCTTCAGGTAACATTACTCATCTACTACTCTCAACTCCATGGTAGCCATATTCAGGTTTCAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS-3UTR CAA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAGCTTGTCCATTCTGTTaGGTAATTGTAAGAGACACG +
Preference number: 5 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLACPFC*VIVRDT
Trigger: CGTGTCTCTTACAATTACCAAACAGAATGGACAAGC...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp TGCATTTCTAACAAGCTCCAGATGAGGTTGATGCTATCTTGCTGGGAATCAAACACACTTGGAGGTGCTTaGACTTTTAGCTTTTTGATT +
Preference number: 5 (lower is better)
Translates to: CISNKLQMRLMLSCWESNTLGGA*TFSFLI
Trigger: AATCAAAAAGCTAAAAGTCAAAGCACCTCCAAGTGT...GTTTGATTCCCAGCAAGATAGCATCAACCTCATCTGGAGCTTGTTAGAAATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS-3UTR CAA 90 bp GGTATCTCTTTTATTCCTTGGTGTTCACCAATGTCTGCTTTTCTGCTCTTGTTTGTTGAGGAATTTGGCTaGGTTGATCTATTCACCATG +
Preference number: 5 (lower is better)
Translates to: GISFIPWCSPMSAFLLLFVEEFG*VDLFTM
Trigger: CATGGTGAATAGATCAACCAAGCCAAATTCCTCAAC...AAACAAGAGCAGAAAAGCAGACATTGGTGAACACCAAGGAATAAAAGAGATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCCGGGCGTTGAGGAATTaGGCTTGGTTGATCTATTCA +
Preference number: 5 (lower is better)
Translates to: NISSMITQPHQILTVHQVRALRN*AWLIYS
Trigger: TGAATAGATCAACCAAGCCAAATTCCTCAACGCCCG...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000413476.6
CDS-3UTR CAA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCTTTCTTCACAAACACTaGAAGCATTCTGTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVFLHKH*KHSVER
Trigger: CCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAATGATCCATCCTTGTTaGATCTGTGCAATGCCTCTT +
Preference number: 5 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQMIHPC*ICAMPL
Trigger: AAGAGGCATTGCACAGATCAAACAAGGATGGATCAT...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS-3UTR CAA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAAAGTGTATATGGTTGTTaGGAATCATGGCCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKSVYGC*ESWPEL
Trigger: AAGCTCTGGCCATGATTCCAAACAACCATATACACT...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAAGTGTATATGGTTGTTaGGAATCATGGCCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLSVYGC*ESWPEL
Trigger: AAGCTCTGGCCATGATTCCAAACAACCATATACACT...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS-3UTR CAA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCGTCTGGTGGAATCTTTaGTGTTATTCTGACTGTCAA +
Preference number: 5 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVVWWNL*CYSDCQ
Trigger: TTGACAGTCAGAATAACACAAAAGATTCCACCAGAC...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGCCTTTGCTTCTTCTTaGCCTTCTGCCATGATTGTG +
Preference number: 5 (lower is better)
Translates to: NISSMITQPHQILTVHQVAFASS*PSAMIV
Trigger: CACAATCATGGCAGAAGGCAAAGAAGAAGCAAAGGC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp AACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCTATCTCTTTTATTCCTaGGTGTTCACCAATGTCTGC +
Preference number: 5 (lower is better)
Translates to: NSTSPDINSSSGQAIEQVYLFYS*VFTNVC
Trigger: GCAGACATTGGTGAACACCAAGGAATAAAAGAGATA...GACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAACACTTCCAAAGTACTaGTTTGATCTGTGCAATGCC +
Preference number: 5 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLTLPKY*FDLCNA
Trigger: GGCATTGCACAGATCAAACAAGTACTTTGGAAGTGT...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp TTTCTTCACAAACACTTGAAGCATTCTGTTGAGAGGCAACTGGAGTTGTCTTCAACACTTGGAGGTGCTTaGACTTTTAGCTTTTTGATT +
Preference number: 5 (lower is better)
Translates to: FLHKHLKHSVERQLELSSTLGGA*TFSFLI
Trigger: AATCAAAAAGCTAAAAGTCAAAGCACCTCCAAGTGT...TGAAGACAACTCCAGTTGCCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS-3UTR CAA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCGGGAATGCCTCTGGCTaGATCGATTGTCTATATACT +
Preference number: 5 (lower is better)
Translates to: NISSMITQPHQILTVHQVGNASG*IDCLYT
Trigger: AGTATATAGACAATCGATCAAGCCAGAGGCATTCCC...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
CDS-3UTR CAA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGAATTTGGCTTGGTaGATCTATTCACCATGGGAG +
Preference number: 5 (lower is better)
Translates to: NISSMITQPHQILTVHQVRNLAW*IYSPWE
Trigger: CTCCCATGGTGAATAGATCAACCAAGCCAAATTCCT...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000413476.6
CDS-3UTR CAA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAATTTCTTCACAAACACTaGAAGCATTCTGTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQFLHKH*KHSVER
Trigger: CCTCTCAACAGAATGCTTCAAGTGTTTGTGAAGAAA...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAAGTCTGGTGGAATCTTTaGTGTTATTCTGACTGTCAA +
Preference number: 5 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKVWWNL*CYSDCQ
Trigger: TTGACAGTCAGAATAACACAAAAGATTCCACCAGAC...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCTGGTGGAATCTTTaGTGTTATTCTGACTGTCAA +
Preference number: 5 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQVWWNL*CYSDCQ
Trigger: TTGACAGTCAGAATAACACAAAAGATTCCACCAGAC...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp ATTGTATTAAGGCCCACCCTACTGACCTCATCTTACCTTGACTATATCTGTAAAACACTTGGAGGTGCTTaGACTTTTAGCTTTTTGATT +
Preference number: 5 (lower is better)
Translates to: IVLRPTLLTSSYLDYICKTLGGA*TFSFLI
Trigger: AATCAAAAAGCTAAAAGTCAAAGCACCTCCAAGTGT...TTTACAGATATAGTCAAGGTAAGATGAGGTCAGTAGGGTGGGCCTTAATACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224337.10
CDS-3UTR CAA 90 bp GATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCAGGCAATAGAACAAACACTTGGAGGTGCTTaGACTTTTAGCTTTTTGATT +
Preference number: 5 (lower is better)
Translates to: DNSTSPDINSSSGQAIEQTLGGA*TFSFLI
Trigger: AATCAAAAAGCTAAAAGTCAAAGCACCTCCAAGTGT...TTGTTCTATTGCCTGACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTAACACTTGGAGGTGCTTaGACTTTTAGCTTTTTGATT +
Preference number: 5 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLTLGGA*TFSFLI
Trigger: AATCAAAAAGCTAAAAGTCAAAGCACCTCCAAGTGT...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp GATATTAACAGTTCATCAGGTCAGGCAATAGAACAAGTCCACATGAGCTTCTTATCTGCCCAAGGCATATaGTTTTGTTGCTTCAATAAA +
Preference number: 5 (lower is better)
Translates to: DINSSSGQAIEQVHMSFLSAQGI*FCCFNK
Trigger: TTTATTGAAGCAACAAAACAATATGCCTTGGGCAGA...TAAGAAGCTCATGTGGACTTGTTCTATTGCCTGACCTGATGAACTGTTAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS-3UTR CAA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCTTCCAAAGTACTTGTTaGATCTGTGCAATGCCTCTT +
Preference number: 5 (lower is better)
Translates to: NISSMITQPHQILTVHQVFQSTC*ICAMPL
Trigger: AAGAGGCATTGCACAGATCAAACAAGTACTTTGGAA...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413476.6
ENST00000427367.6
CDS GCA 90 bp ATAAAAATAATAAATAATAAAAATGATCAGACCTTGTTTGATCTGTaGAATGCCTCTTCAGCAGACTTTCGATCACAGGCTCCAGCATAC +
Preference number: 5 (lower is better)
Translates to: IKIINNKNDQTLFDL*NASSADFRSQAPAY
Trigger: GTATGCTGGAGCCTGTGATCGAAAGTCTGCTGAAGAGGCATTGCACAGATCAAACAAGGTCTGATCATTTTTATTATTTATTATTTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485193.1
CDS CCA 90 bp CGCTTATTAAAGAATACAACTAGTGTATATGGTTGTTTGGAATCATaGCCAGAGCTTTTCCGAATAAGAAATGATCCATCCTTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: RLLKNTTSVYGCLES*PELFRIRNDPSLFD
Trigger: ATCAAACAAGGATGGATCATTTCTTATTCGGAAAAGCTCTGGCCATGATTCCAAACAACCATATACACTAGTTGTATTCTTTAATAAGCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS-3UTR CAA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCACACTTGGAGGTGCTTaGACTTTTAGCTTTTTGATT +
Preference number: 5 (lower is better)
Translates to: NISSMITQPHQILTVHQVTLGGA*TFSFLI
Trigger: AATCAAAAAGCTAAAAGTCAAAGCACCTCCAAGTGT...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
CDS-3UTR CAA 90 bp AATATTAGTAGCATGATAACTCAACCTCACCAGATATTAACAGTTCATCAGGTCTCTGCCCAAGGCATATaGTTTTGTTGCTTCAATAAA +
Preference number: 5 (lower is better)
Translates to: NISSMITQPHQILTVHQVSAQGI*FCCFNK
Trigger: TTTATTGAAGCAACAAAACAATATGCCTTGGGCAGA...GACCTGATGAACTGTTAATATCTGGTGAGGTTGAGTTATCATGCTACTAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS TCA 72 bp GGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTaGCTTGGTTTCCCAGGCCCCACTGTTTCGACCTGC +
Preference number: 6 (lower is better)
Translates to: GPWQRGWCSWWR*LGFPGPTVSTC
Trigger: GCAGGTCGAAACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468252.1
CDS CCA 72 bp CCCAGGCCCCACTGTTTCGACCTGAAGCTGTTCCTCTaGCGAAGGGCAGGGCTGGGTGAACCGGCCTGGTTT +
Preference number: 6 (lower is better)
Translates to: PRPHCFDLKLFL*RRAGLGEPAWF
Trigger: AAACCAGGCCGGTTCACCCAGCCCTGCCCTTCGCCAGAGGAACAGCTTCAGGTCGAAACAGTGGGGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427367.6
CDS CAA 90 bp TTCCCGGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTaGGTTTCCCAGGCCCCACTGTTTCGACCTGAAGCTGTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: FPARGNGDGAAGGGD*VSQAPLFRPEAVPL
Trigger: CAGAGGAACAGCTTCAGGTCGAAACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCCGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427367.6
CDS TCA 72 bp GGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTaGCTTGGTTTCCCAGGCCCCACTGTTTCGACCTTT +
Preference number: 6 (lower is better)
Translates to: GPWQRGWCSWWR*LGFPGPTVSTF
Trigger: AAAGGTCGAAACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371176.6
CDS CCA 72 bp CAGGGCTGGGTGAACCGGCCTGGTTTCCTGCTCTACTaGAGGCGGCTCGTAGCTGTCATCAGCGTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: QGWVNRPGFLLY*RRLVAVISVLL
Trigger: GAGGAGAACGCTGATGACAGCTACGAGCCGCCTCCAGTAGAGCAGGAAACCAGGCCGGTTCACCCAGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
ENST00000467799.6
CDS TCA 72 bp CAGGGCCGGCAGGGTGGAGGTGAGCCTTGCTTTCTCTaGAGGCCAGCTGGGCTTACTGGGAAGTGTCTTGCT +
Preference number: 6 (lower is better)
Translates to: QGRQGGGEPCFL*RPAGLTGKCLA
Trigger: AGCAAGACACTTCCCAGTAAGCCCAGCTGGCCTTCAGAGAAAGCAAGGCTCACCTCCACCCTGCCGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS CCA 72 bp TCAGCCTATATACTCGCCTCTGGCGAAGGGCAGGGCTaGGTGAACCGGCCTGGTTTCCTGCTCTACTGGAGG +
Preference number: 6 (lower is better)
Translates to: SAYILASGEGQG*VNRPGFLLYWR
Trigger: CCTCCAGTAGAGCAGGAAACCAGGCCGGTTCACCCAGCCCTGCCCTTCGCCAGAGGCGAGTATATAGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS CCA 72 bp CACGGGGACCACATAATCAGCCTATATACTCGCCTCTaGCGAAGGGCAGGGCTGGGTGAACCGGCCTGGTTT +
Preference number: 6 (lower is better)
Translates to: HGDHIISLYTRL*RRAGLGEPAWF
Trigger: AAACCAGGCCGGTTCACCCAGCCCTGCCCTTCGCCAGAGGCGAGTATATAGGCTGATTATGTGGTCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467799.6
CDS CCA 72 bp GTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTTaGTTTCCCAGGCCCCACTGTTTCGACCTGCACAAA +
Preference number: 6 (lower is better)
Translates to: VATGMVQLVEVT*FPRPHCFDLHK
Trigger: TTTGTGCAGGTCGAAACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468252.1
CDS CAA 90 bp TTCCCGGCCCGTGGCAACGGGGATGGTGCAGCTGGTGGAGGTGACTaGGTTTCCCAGGCCCCACTGTTTCGACCTGCACAAACATATACA +
Preference number: 6 (lower is better)
Translates to: FPARGNGDGAAGGGD*VSQAPLFRPAQTYT
Trigger: TGTATATGTTTGTGCAGGTCGAAACAGTGGGGCCTGGGAAACCAAGTCACCTCCACCAGCTGCACCATCCCCGTTGCCACGGGCCGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468252.1
CDS TCA 72 bp TCATCCTCAAGGAGGCCTTTGGGTTTGGGTGGGACTTaGGGTTTCTGCAAAGCAGTCAGGGCCGGCAGGGTG +
Preference number: 6 (lower is better)
Translates to: SSSRRPLGLGGT*GFCKAVRAGRV
Trigger: CACCCTGCCGGCCCTGACTGCTTTGCAGAAACCTCAAGTCCCACCCAAACCCAAAGGCCTCCTTGAGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS CCA 72 bp ATTGTCTATATACTCGCCTCTGGCGAAGGGCAGGGCTaGGTGAACCGGCCTGGTTTCCTGCTCTACTGGAGG +
Preference number: 6 (lower is better)
Translates to: IVYILASGEGQG*VNRPGFLLYWR
Trigger: CCTCCAGTAGAGCAGGAAACCAGGCCGGTTCACCCAGCCCTGCCCTTCGCCAGAGGCGAGTATATAGACAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS CCA 72 bp GCCTCTGGCTTGATCGATTGTCTATATACTCGCCTCTaGCGAAGGGCAGGGCTGGGTGAACCGGCCTGGTTT +
Preference number: 6 (lower is better)
Translates to: ASGLIDCLYTRL*RRAGLGEPAWF
Trigger: AAACCAGGCCGGTTCACCCAGCCCTGCCCTTCGCCAGAGGCGAGTATATAGACAATCGATCAAGCCAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS CAA 72 bp CTCATCCTCAAGGAGGCCTTTGGGTTTGGGTGGGACTaGAGGTTTCTGCAAAGCAGTCAGGGCCGGCAGGGT +
Preference number: 6 (lower is better)
Translates to: LILKEAFGFGWD*RFLQSSQGRQG
Trigger: ACCCTGCCGGCCCTGACTGCTTTGCAGAAACCTCAAGTCCCACCCAAACCCAAAGGCCTCCTTGAGGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS CAA 90 bp ATAATCAGCCTCATCCTCAAGGAGGCCTTTGGGTTTGGGTGGGACTaGAGGTTTCTGCAAAGCAGTCAGGGCCGGCAGGGTGGAGGTGAG +
Preference number: 6 (lower is better)
Translates to: IISLILKEAFGFGWD*RFLQSSQGRQGGGE
Trigger: CTCACCTCCACCCTGCCGGCCCTGACTGCTTTGCAGAAACCTCAAGTCCCACCCAAACCCAAAGGCCTCCTTGAGGATGAGGCTGATTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS TCA 72 bp AAGCCTCTGGTCTCAAGGGTTCCGGCCACTCAAGTCTaGTTTCTGAGAGTGCAGGCTGCTGGCAAACACCCC +
Preference number: 6 (lower is better)
Translates to: KPLVSRVPATQV*FLRVQAAGKHP
Trigger: GGGGTGTTTGCCAGCAGCCTGCACTCTCAGAAATCAGACTTGAGTGGCCGGAACCCTTGAGACCAGAGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000467799.6
CDS CCA 72 bp TTCCTGGCCCTCCTAGGGAGCAGCATGGTAAGCCTCTaGTCTCAAGGGTTCCGGCCACTCAAGTCTGATTTC +
Preference number: 6 (lower is better)
Translates to: FLALLGSSMVSL*SQGFRPLKSDF
Trigger: GAAATCAGACTTGAGTGGCCGGAACCCTTGAGACCAGAGGCTTACCATGCTGCTCCCTAGGAGGGCCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000467799.6
CDS CCA 72 bp ATCAGCCTCATCCTCAAGGAGGCCTTTGGGTTTGGGTaGGACTTGAGGTTTCTGCAAAGCAGTCAGGGCCGG +
Preference number: 6 (lower is better)
Translates to: ISLILKEAFGFG*DLRFLQSSQGR
Trigger: CCGGCCCTGACTGCTTTGCAGAAACCTCAAGTCCCACCCAAACCCAAAGGCCTCCTTGAGGATGAGGCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS TCA 72 bp TGGTCTCAAGGGTTCCGGCCACTCAAGTCTGATTTCTaGGAGTGCAGGCTGCTGGCAAACACCCCTGCTCTA +
Preference number: 6 (lower is better)
Translates to: WSQGFRPLKSDF*ECRLLANTPAL
Trigger: TAGAGCAGGGGTGTTTGCCAGCAGCCTGCACTCTCAGAAATCAGACTTGAGTGGCCGGAACCCTTGAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000467799.6
CDS TCA 72 bp CTGAAGGCCAGCTGGGCTTACTGGGAAGTGTCTTGCTaGAGGGTGGGGAATGCCTCTGGCTTGATCGATTGT +
Preference number: 6 (lower is better)
Translates to: LKASWAYWEVSC*RVGNASGLIDC
Trigger: ACAATCGATCAAGCCAGAGGCATTCCCCACCCTTCAGCAAGACACTTCCCAGTAAGCCCAGCTGGCCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS CAA 72 bp TTCTCTGAAGGCCAGCTGGGCTTACTGGGAAGTGTCTaGCTGAAGGGTGGGGAATGCCTCTGGCTTGATCGA +
Preference number: 6 (lower is better)
Translates to: FSEGQLGLLGSV*LKGGECLWLDR
Trigger: TCGATCAAGCCAGAGGCATTCCCCACCCTTCAGCAAGACACTTCCCAGTAAGCCCAGCTGGCCTTCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS TCA 72 bp CTGTGCACTTGCCAGTCTGTTGATGTGGTTGTGCTATaGGGACCAGGACTCCCTCCCAGCAGTGTTACAGGT +
Preference number: 6 (lower is better)
Translates to: LCTCQSVDVVVL*GPGLPPSSVTG
Trigger: ACCTGTAACACTGCTGGGAGGGAGTCCTGGTCCTCATAGCACAACCACATCAACAGACTGGCAAGTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485193.1
CDS CCA 72 bp AAGGGGAAGGCAGGGAAGGGCTATGATACACAGAGATaGGTTGTCACTGATGCTGTCTGCCCAACCAGCCAA +
Preference number: 6 (lower is better)
Translates to: KGKAGKGYDTQR*VVTDAVCPTSQ
Trigger: TTGGCTGGTTGGGCAGACAGCATCAGTGACAACCCATCTCTGTGTATCATAGCCCTTCCCTGCCTTCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS CAA 72 bp TGGGTGGCTTGGGAATTCAGGTGGGTCTTGAAGCTGTaGGTGATAGGTACGGAGTACGGGAGAGGGTTGCTA +
Preference number: 6 (lower is better)
Translates to: WVAWEFRWVLKL*VIGTEYGRGLL
Trigger: TAGCAACCCTCTCCCGTACTCCGTACCTATCACCAACAGCTTCAAGACCCACCTGAATTCCCAAGCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS CAA 90 bp AGAGGAAGGGGAAGGCAGGGAAGGGCTATGATACACAGAGATGGGTaGTCACTGATGCTGTCTGCCCAACCAGCCAAAGAAGCACACACT +
Preference number: 6 (lower is better)
Translates to: RGRGRQGRAMIHRDG*SLMLSAQPAKEAHT
Trigger: AGTGTGTGCTTCTTTGGCTGGTTGGGCAGACAGCATCAGTGACAACCCATCTCTGTGTATCATAGCCCTTCCCTGCCTTCCCCTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS TCA 72 bp ATCAGCGTTCTCCTCGGCGGGCATCACGTACATCTCTaGGTCCGAGTGCTCATCTGGATTTTCATAGTCGCT +
Preference number: 6 (lower is better)
Translates to: ISVLLGGHHVHL*VRVLIWIFIVA
Trigger: AGCGACTATGAAAATCCAGATGAGCACTCGGACTCAGAGATGTACGTGATGCCCGCCGAGGAGAACGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
ENST00000467799.6
CDS TCA 72 bp CTGAGATGTCATGGATCTGTGCACTTGCCAGTCTGTTaGTGTGGTTGTGCTATGAGGACCAGGACTCCCTCC +
Preference number: 6 (lower is better)
Translates to: LRCHGSVHLPVC*CGCAMRTRTPS
Trigger: GGAGGGAGTCCTGGTCCTCATAGCACAACCACATCAACAGACTGGCAAGTGCACAGATCCATGACATCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485193.1
CDS CCA 72 bp CATAATCAGCCTCATCCTCAAGGAGGCCTTTGGGTTTaGGTGGGACTTGAGGTTTCTGCAAAGCAGTCAGGG +
Preference number: 6 (lower is better)
Translates to: HNQPHPQGGLWV*VGLEVSAKQSG
Trigger: CCCTGACTGCTTTGCAGAAACCTCAAGTCCCACCCAAACCCAAAGGCCTCCTTGAGGATGAGGCTGATTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS CCA 72 bp ATGTCATGGATCTGTGCACTTGCCAGTCTGTTGATGTaGTTGTGCTATGAGGACCAGGACTCCCTCCCAGCA +
Preference number: 6 (lower is better)
Translates to: MSWICALASLLM*LCYEDQDSLPA
Trigger: TGCTGGGAGGGAGTCCTGGTCCTCATAGCACAACCACATCAACAGACTGGCAAGTGCACAGATCCATGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485193.1
CDS CAA 72 bp GGAAGGCAGGGAAGGGCTATGATACACAGAGATGGGTaGTCACTGATGCTGTCTGCCCAACCAGCCAAAGAA +
Preference number: 6 (lower is better)
Translates to: GRQGRAMIHRDG*SLMLSAQPAKE
Trigger: TTCTTTGGCTGGTTGGGCAGACAGCATCAGTGACAACCCATCTCTGTGTATCATAGCCCTTCCCTGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS CAA 90 bp AGCCTTGCTTTCTCTGAAGGCCAGCTGGGCTTACTGGGAAGTGTCTaGCTGAAGGGTGGGGAATGCCTCTGGCTTGATCGATTGTCTATA +
Preference number: 6 (lower is better)
Translates to: SLAFSEGQLGLLGSV*LKGGECLWLDRLSI
Trigger: TATAGACAATCGATCAAGCCAGAGGCATTCCCCACCCTTCAGCAAGACACTTCCCAGTAAGCCCAGCTGGCCTTCAGAGAAAGCAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000472763.1
CDS CAA 90 bp TGGGTCTTGAAGCTGTTGGTGATAGGTACGGAGTACGGGAGAGGGTaGCTACATGATGGCGGACTGAAACCTGAATATGGCTACCATGGA +
Preference number: 6 (lower is better)
Translates to: WVLKLLVIGTEYGRG*LHDGGLKPEYGYHG
Trigger: TCCATGGTAGCCATATTCAGGTTTCAGTCCGCCATCATGTAGCAACCCTCTCCCGTACTCCGTACCTATCACCAACAGCTTCAAGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS CAA 90 bp GTCTTAGTTACTGAGATGTCATGGATCTGTGCACTTGCCAGTCTGTaGATGTGGTTGTGCTATGAGGACCAGGACTCCCTCCCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: VLVTEMSWICALASL*MWLCYEDQDSLPAV
Trigger: CACTGCTGGGAGGGAGTCCTGGTCCTCATAGCACAACCACATCAACAGACTGGCAAGTGCACAGATCCATGACATCTCAGTAACTAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485193.1
CDS TCA 72 bp CGGAGTACGGGAGAGGGTTGCTACATGATGGCGGACTaGAACCTGAATATGGCTACCATGGAGTTGAGAGTA +
Preference number: 6 (lower is better)
Translates to: RSTGEGCYMMAD*NLNMATMELRV
Trigger: TACTCTCAACTCCATGGTAGCCATATTCAGGTTTCAGTCCGCCATCATGTAGCAACCCTCTCCCGTACTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS GCA 72 bp TATGATACACAGAGATGGGTTGTCACTGATGCTGTCTaGCCAACCAGCCAAAGAAGCACACACTGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: YDTQRWVVTDAV*PTSQRSTHCGP
Trigger: TGGGCCACAGTGTGTGCTTCTTTGGCTGGTTGGGCAGACAGCATCAGTGACAACCCATCTCTGTGTATCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS CAA 72 bp GCAGACTTTCGATCACAGGCTCCAGCATACCATGGCTaGCAGAGAACGCCAGCTTCCTGTTCTGAAATAGTG +
Preference number: 6 (lower is better)
Translates to: ADFRSQAPAYHG*QRTPASCSEIV
Trigger: CACTATTTCAGAACAGGAAGCTGGCGTTCTCTGCAAGCCATGGTATGCTGGAGCCTGTGATCGAAAGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
ENST00000485193.1
CDS CAA 72 bp AAGCTGTTGGTGATAGGTACGGAGTACGGGAGAGGGTaGCTACATGATGGCGGACTGAAACCTGAATATGGC +
Preference number: 6 (lower is better)
Translates to: KLLVIGTEYGRG*LHDGGLKPEYG
Trigger: GCCATATTCAGGTTTCAGTCCGCCATCATGTAGCAACCCTCTCCCGTACTCCGTACCTATCACCAACAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS CAA 72 bp TCCCCCTTCTGTAAATCTTGGCAGAGGTATGGGTTTTaGGTGGATTTGTTTCTGGGCAGGAGGAAACACTGG +
Preference number: 6 (lower is better)
Translates to: SPFCKSWQRYGF*VDLFLGRRKHW
Trigger: CCAGTGTTTCCTCCTGCCCAGAAACAAATCCACCAAAAACCCATACCTCTGCCAAGATTTACAGAAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000224337.10
ENST00000371176.6
ENST00000413476.6
ENST00000427367.6
ENST00000485193.1
CDS CAA 90 bp GGTAAGGAGGGAATGTGTATTTGTTCTTTTGTGGTAATGGGTGGCTaGGGAATTCAGGTGGGTCTTGAAGCTGTTGGTGATAGGTACGGA +
Preference number: 6 (lower is better)
Translates to: GKEGMCICSFVVMGG*GIQVGLEAVGDRYG
Trigger: TCCGTACCTATCACCAACAGCTTCAAGACCCACCTGAATTCCCAAGCCACCCATTACCACAAAAGAACAAATACACATTCCCTCCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS TCA 72 bp GCAGCTGAAGAGAACTACCCAGGTGCTTTCATAATGTaGGATGGGAAGATTAAAGCATGGAAGAGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: AAEENYPGAFIM*DGKIKAWKRKG
Trigger: CCCCTTCCTCTTCCATGCTTTAATCTTCCCATCTCACATTATGAAAGCACCTGGGTAGTTCTCTTCAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS TCA 72 bp ATGTCTGTCCTCATCCCAAAACCCAGCAACATCAGCTaGGAAGAACCAAATTTGATCAGAAGTCTTCCCGGG +
Preference number: 6 (lower is better)
Translates to: MSVLIPKPSNIS*EEPNLIRSLPG
Trigger: CCCGGGAAGACTTCTGATCAAATTTGGTTCTTCTCAGCTGATGTTGCTGGGTTTTGGGATGAGGACAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485193.1
CDS CCA 72 bp CCAGGAGAGATTAAATGTTCTGACATCAAGACTATTTaGAAGGGTTCCAGGAAAGGGAGCAGGTGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: PGEIKCSDIKTI*KGSRKGSRCLK
Trigger: CTTCAGACACCTGCTCCCTTTCCTGGAACCCTTCCAAATAGTCTTGATGTCAGAACATTTAATCTCTCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495266.1
CDS CAA 72 bp GGAATGTGTATTTGTTCTTTTGTGGTAATGGGTGGCTaGGGAATTCAGGTGGGTCTTGAAGCTGTTGGTGAT +
Preference number: 6 (lower is better)
Translates to: GMCICSFVVMGG*GIQVGLEAVGD
Trigger: ATCACCAACAGCTTCAAGACCCACCTGAATTCCCAAGCCACCCATTACCACAAAAGAACAAATACACATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS TCA 72 bp CAAAACCCAGCAACATCAGCTGAGAAGAACCAAATTTaGTCAGAAGTCTTCCCGGGAACATGTCTTAGTTAC +
Preference number: 6 (lower is better)
Translates to: QNPATSAEKNQI*SEVFPGTCLSY
Trigger: GTAACTAAGACATGTTCCCGGGAAGACTTCTGATCAAATTTGGTTCTTCTCAGCTGATGTTGCTGGGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485193.1
CDS TCA 72 bp CCTGAATATGGCTACCATGGAGTTGAGAGTAGTAGATaGGTAATGTTACCTGAAGAGGTATCACTTGTACTG +
Preference number: 6 (lower is better)
Translates to: PEYGYHGVESSR*VMLPEEVSLVL
Trigger: CAGTACAAGTGATACCTCTTCAGGTAACATTACTCATCTACTACTCTCAACTCCATGGTAGCCATATTCAGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS TCA 72 bp TTAAGGCGACAAACTCTTACCTTTTTCAGGTGGAGGTaGACTGCTTTCTGTGGGATGAATATAGTTTTCATC +
Preference number: 6 (lower is better)
Translates to: LRRQTLTFFRWR*TAFCGMNIVFI
Trigger: GATGAAAACTATATTCATCCCACAGAAAGCAGTTCACCTCCACCTGAAAAAGGTAAGAGTTTGTCGCCTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS GCA 72 bp GCGACAAACTCTTACCTTTTTCAGGTGGAGGTGAACTaGTTTCTGTGGGATGAATATAGTTTTCATCATTAT +
Preference number: 6 (lower is better)
Translates to: ATNSYLFQVEVN*FLWDEYSFHHY
Trigger: ATAATGATGAAAACTATATTCATCCCACAGAAAGCAGTTCACCTCCACCTGAAAAAGGTAAGAGTTTGTCGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472763.1
CDS TCA 72 bp TTCTGGATCAGGAAAATTATCATATTAGGATTAGAGTaGAATGTCTGTCCTCATCCCAAAACCCAGCAACAT +
Preference number: 6 (lower is better)
Translates to: FWIRKIIILGLE*NVCPHPKTQQH
Trigger: ATGTTGCTGGGTTTTGGGATGAGGACAGACATTTCACTCTAATCCTAATATGATAATTTTCCTGATCCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485193.1
CDS CCA 72 bp AAGAATACAACTAGTGTATATGGTTGTTTGGAATCATaGCCAGAGCTTTTCCGAATAAGAAATGATCCATCC +
Preference number: 6 (lower is better)
Translates to: KNTTSVYGCLES*PELFRIRNDPS
Trigger: GGATGGATCATTTCTTATTCGGAAAAGCTCTGGCCATGATTCCAAACAACCATATACACTAGTTGTATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS CAA 90 bp ACTTCCAAAGTACTCTTCACCATTTTTCTTTCTGCCCAAGGCATATaGTTTTGTTGCTTCAATAAATCGCACAGGAATATTATATACTCG +
Preference number: 6 (lower is better)
Translates to: TSKVLFTIFLSAQGI*FCCFNKSHRNIIYS
Trigger: CGAGTATATAATATTCCTGTGCGATTTATTGAAGCAACAAAACAATATGCCTTGGGCAGAAAGAAAAATGGTGAAGAGTACTTTGGAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS GCA 72 bp ACCATTTTTCTTTCTGCCCAAGGCATATTGTTTTGTTaGTTCAATAAATCGCACAGGAATATTATATACTCG +
Preference number: 6 (lower is better)
Translates to: TIFLSAQGILFC*FNKSHRNIIYS
Trigger: CGAGTATATAATATTCCTGTGCGATTTATTGAAGCAACAAAACAATATGCCTTGGGCAGAAAGAAAAATGGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6
CDS CAA 72 bp CGCTTATTAAAGAATACAACTAGTGTATATGGTTGTTaGGAATCATGGCCAGAGCTTTTCCGAATAAGAAAT +
Preference number: 6 (lower is better)
Translates to: RLLKNTTSVYGC*ESWPELFRIRN
Trigger: ATTTCTTATTCGGAAAAGCTCTGGCCATGATTCCAAACAACCATATACACTAGTTGTATTCTTTAATAAGCG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224337.10
ENST00000371176.6