RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BLACAT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000281406

Ensembl transcript IDs: ENST00000625854.1, ENST00000626538.2, ENST00000629113.1, ENST00000629624.2

Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCAAGGCCTaGGAGGCGCACAAGGGGAAAGCTCTCCTCGGCCACCCGCTCCCC +
Preference number: 1 (lower is better)
Translates to: WAHCQTPAAAIPAKA*EAHKGKALLGHPLP
Trigger: GGGGAGCGGGTGGCCGAGGAGAGCTTTCCCCTTGTGCGCCTCTCAGGCCTTGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp GGAGCAGAAGCCTGGCCCGAAGTCAGAGGCCCAGGGCGCAGGGTCTaGGAATGCTGGGGCTGCTTTGGCCTTTCCCTATTCCCTGGGCTC +
Preference number: 1 (lower is better)
Translates to: GAEAWPEVRGPGRRV*ECWGCFGLSLFPGL
Trigger: GAGCCCAGGGAATAGGGAAAGGCCAAAGCAGCCCCAGCATTCGCAGACCCTGCGCCCTGGGCCTCTGACTTCGGGCCAGGCTTCTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp GCCTGGCCCGAAGTCAGAGGCCCAGGGCGCAGGGTCTGCGAATGCTaGGGCTGCTTTGGCCTTTCCCTATTCCCTGGGCTCATCCAAGGG +
Preference number: 1 (lower is better)
Translates to: AWPEVRGPGRRVCEC*GCFGLSLFPGLIQG
Trigger: CCCTTGGATGAGCCCAGGGAATAGGGAAAGGCCAAAGCAGCCCCAGCATTCGCAGACCCTGCGCCCTGGGCCTCTGACTTCGGGCCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp GCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTaGCAAGGCCTGAGAGGCGCACAAGGGGAAAGCTCTCCTCGGCCA +
Preference number: 1 (lower is better)
Translates to: ALWMGSLPNPCSCNP*QGLRGAQGESSPRP
Trigger: TGGCCGAGGAGAGCTTTCCCCTTGTGCGCCTCTCAGGCCTTGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp CCCGAAGTCAGAGGCCCAGGGCGCAGGGTCTGCGAATGCTGGGGCTaGTTTGGCCTTTCCCTATTCCCTGGGCTCATCCAAGGGCCTAGA +
Preference number: 1 (lower is better)
Translates to: PEVRGPGRRVCECWG*FGLSLFPGLIQGPR
Trigger: TCTAGGCCCTTGGATGAGCCCAGGGAATAGGGAAAGGCCAAAGCAGCCCCAGCATTCGCAGACCCTGCGCCCTGGGCCTCTGACTTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp GAAGCCTGGCCCGAAGTCAGAGGCCCAGGGCGCAGGGTCTGCGAATaGTGGGGCTGCTTTGGCCTTTCCCTATTCCCTGGGCTCATCCAA +
Preference number: 1 (lower is better)
Translates to: EAWPEVRGPGRRVCE*WGCFGLSLFPGLIQ
Trigger: TTGGATGAGCCCAGGGAATAGGGAAAGGCCAAAGCAGCCCCAGCATTCGCAGACCCTGCGCCCTGGGCCTCTGACTTCGGGCCAGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp GAACACGGGTGGGTCAGGGCCGGGGCTGGAGGAAACACTGCTTTCTaGAGAGCAAGAACAGAGGGAGCCACGGAGCCACTGGCCACCTCT +
Preference number: 1 (lower is better)
Translates to: EHGWVRAGAGGNTAF*RARTEGATEPLATS
Trigger: AGAGGTGGCCAGTGGCTCCGTGGCTCCCTCTGTTCTTGCTCTCCAGAAAGCAGTGTTTCCTCCAGCCCCGGCCCTGACCCACCCGTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR GCA 90 bp CTGGCTAGAAGCTGCTACCTCCTGCTCAGACAATTCCAGCTGCAGTaGTGGCCCCAACCTCAGCCCTGGGTGAAGAAGGGGCTGCCGGCT +
Preference number: 1 (lower is better)
Translates to: LARSCYLLLRQFQLQ*WPQPQPWVKKGLPA
Trigger: AGCCGGCAGCCCCTTCTTCACCCAGGGCTGAGGTTGGGGCCAGCACTGCAGCTGGAATTGTCTGAGCAGGAGGTAGCAGCTTCTAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp GGGAGAGTCCTGAGGATCTGTCTGGGTCCTGCCATCTCCCCCTCCTaGCTTCCTCCCGCCCCTCAGATGGAACACGGGAATGAGCTGAAG +
Preference number: 1 (lower is better)
Translates to: GRVLRICLGPAISPS*LPPAPQMEHGNELK
Trigger: CTTCAGCTCATTCCCGTGTTCCATCTGAGGGGCGGGAGGAAGGCAGGAGGGGGAGATGGCAGGACCCAGACAGATCCTCAGGACTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp GCTAGAAGCTGCTACCTCCTGCTCAGACAATTCCAGCTGCAGTGCTaGCCCCAACCTCAGCCCTGGGTGAAGAAGGGGCTGCCGGCTTGG +
Preference number: 1 (lower is better)
Translates to: ARSCYLLLRQFQLQC*PQPQPWVKKGLPAW
Trigger: CCAAGCCGGCAGCCCCTTCTTCACCCAGGGCTGAGGTTGGGGCCAGCACTGCAGCTGGAATTGTCTGAGCAGGAGGTAGCAGCTTCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp AGGCCTCCCCACATCTGTGATGCTGGCAAGGAGGCACAGGCATCATaGACACGGGTGGGTCAGGGCCGGGGCTGGAGGAAACACTGCTTT +
Preference number: 1 (lower is better)
Translates to: RPPHICDAGKEAQAS*TRVGQGRGWRKHCF
Trigger: AAAGCAGTGTTTCCTCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCTTGCCAGCATCACAGATGTGGGGAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR TCA 90 bp CCTCCTGCCTTCCTCCCGCCCCTCAGATGGAACACGGGAATGAGCTaGAGGAGGAGAGACGGCTGCCCCAGAAGGGAAAGAGACAGACCA +
Preference number: 1 (lower is better)
Translates to: PPAFLPPLRWNTGMS*RRRDGCPRRERDRP
Trigger: TGGTCTGTCTCTTTCCCTTCTGGGGCAGCCGTCTCTCCTCCTTCAGCTCATTCCCGTGTTCCATCTGAGGGGCGGGAGGAAGGCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp CCGAAGCTCTCAGGGCAGGAAAGAAGTTTCACTCCTTGGCCTCCCTaGGGCTTCTCAGTCTCTGGAAGGCATGCGGCAGGTCCTGGGGTT +
Preference number: 1 (lower is better)
Translates to: PKLSGQERSFTPWPP*GFSVSGRHAAGPGV
Trigger: AACCCCAGGACCTGCCGCATGCCTTCCAGAGACTGAGAAGCCCCAGGGAGGCCAAGGAGTGAAACTTCTTTCCTGCCCTGAGAGCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR TCA 90 bp GCCCAGGTCTGGGAGCTCTTGGCTTTGGCAATTTCTTCCTCAGTATaGCGACTTCCTCCAGGGATGCCCTGGGCAGCTACCGCTCACCCT +
Preference number: 1 (lower is better)
Translates to: AQVWELLALAISSSV*RLPPGMPWAATAHP
Trigger: AGGGTGAGCGGTAGCTGCCCAGGGCATCCCTGGAGGAAGTCGTCATACTGAGGAAGAAATTGCCAAAGCCAAGAGCTCCCAGACCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp GGCATGAGCTGGGCAGGCAGAGGCTGCCAGCATAGAATGTGCCCTTaGTTCTCCCAGGTTTTGGGCGAACCAGCCGAGGAAGACTTTTGC +
Preference number: 1 (lower is better)
Translates to: GMSWAGRGCQHRMCP*FSQVLGEPAEEDFC
Trigger: GCAAAAGTCTTCCTCGGCTGGTTCGCCCAAAACCTGGGAGAAGCAAGGGCACATTCTATGCTGGCAGCCTCTGCCTGCCCAGCTCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp TGTGAGGGCAGAGGAAACCTGCGACCCTCTGGTTCCACAACCCTATaGCCCACTGAGGCTCAACTTCCCAGACTCACAGAGCCCTGGACT +
Preference number: 1 (lower is better)
Translates to: CEGRGNLRPSGSTTL*PTEAQLPRLTEPWT
Trigger: AGTCCAGGGCTCTGTGAGTCTGGGAAGTTGAGCCTCAGTGGGGCATAGGGTTGTGGAACCAGAGGGTCGCAGGTTTCCTCTGCCCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp AAGAGTCCCCCGAAGCTCTCAGGGCAGGAAAGAAGTTTCACTCCTTaGCCTCCCTGGGGCTTCTCAGTCTCTGGAAGGCATGCGGCAGGT +
Preference number: 1 (lower is better)
Translates to: KSPPKLSGQERSFTP*PPWGFSVSGRHAAG
Trigger: ACCTGCCGCATGCCTTCCAGAGACTGAGAAGCCCCAGGGAGGCCAAGGAGTGAAACTTCTTTCCTGCCCTGAGAGCTTCGGGGGACTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR TCA 90 bp ACAGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTaGGAAGAGTCCCCCGAAGCTCTCAGGGCAGGAAAGAAGTTTCAC +
Preference number: 1 (lower is better)
Translates to: TALLAQGGTCLMRLP*EESPEALRAGKKFH
Trigger: GTGAAACTTCTTTCCTGCCCTGAGAGCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR TCA 90 bp ACCTGTCAGAAGGGCTATTCTGTCCCTGGGGAGCTAGAGGGGGTCTaGCTTTGCTCCTTGGCTGAGCTGCTCCCTGATGAGGGAGAACAG +
Preference number: 1 (lower is better)
Translates to: TCQKGYSVPGELEGV*LCSLAELLPDEGEQ
Trigger: CTGTTCTCCCTCATCAGGGAGCAGCTCAGCCAAGGAGCAAAGTCAGACCCCCTCTAGCTCCCCAGGGACAGAATAGCCCTTCTGACAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp TCCTCTGCCACAGAAGTGACTTTTCTAGGATTGCAGCCTCGCAGGTaGCCGCTAGGGAAACACATGCCCTCCAGGAGGCTCTCTGGCCTC +
Preference number: 1 (lower is better)
Translates to: SSATEVTFLGLQPRR*PLGKHMPSRRLSGL
Trigger: GAGGCCAGAGAGCCTCCTGGAGGGCATGTGTTTCCCTAGCGGTCACCTGCGAGGCTGCAATCCTAGAAAAGTCACTTCTGTGGCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp CAGAGGAAACCTGCGACCCTCTGGTTCCACAACCCTATGCCCCACTaGGGCTCAACTTCCCAGACTCACAGAGCCCTGGACTCCAAAGGA +
Preference number: 1 (lower is better)
Translates to: QRKPATLWFHNPMPH*GSTSQTHRALDSKG
Trigger: TCCTTTGGAGTCCAGGGCTCTGTGAGTCTGGGAAGTTGAGCCTCAGTGGGGCATAGGGTTGTGGAACCAGAGGGTCGCAGGTTTCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp TGTCTGTTGTCTGCACGGAGTGCATCTGTGAGGGCAGAGGAAACCTaGGACCCTCTGGTTCCACAACCCTATGCCCCACTGAGGCTCAAC +
Preference number: 1 (lower is better)
Translates to: CLLSARSASVRAEET*DPLVPQPYAPLRLN
Trigger: GTTGAGCCTCAGTGGGGCATAGGGTTGTGGAACCAGAGGGTCGCAGGTTTCCTCTGCCCTCACAGATGCACTCCGTGCAGACAACAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp GCAGAGGCTGCCAGCATAGAATGTGCCCTTGCTTCTCCCAGGTTTTaGGCGAACCAGCCGAGGAAGACTTTTGCCCTCCCTAGTTGCCCA +
Preference number: 1 (lower is better)
Translates to: AEAASIECALASPRF*ANQPRKTFALPSCP
Trigger: TGGGCAACTAGGGAGGGCAAAAGTCTTCCTCGGCTGGTTCGCCCAAAACCTGGGAGAAGCAAGGGCACATTCTATGCTGGCAGCCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp CACCCATGTTCCCAAAGCCAGGGCTCAAGATATCTAGTATCCCTCTaGAGCCAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGG +
Preference number: 1 (lower is better)
Translates to: HPCSQSQGSRYLVSL*SQGSSPGGGSSLDG
Trigger: CCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTGGCTCCAGAGGGATACTAGATATCTTGAGCCCTGGCTTTGGGAACATGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp GGAACGTTAGCACCATTGACTCTCAGGGGTCTCTTGCCACTGCCATaGAGGTGGGGACATAAGGAGAGGACTAGAAGCTGGGCCAGAGGG +
Preference number: 1 (lower is better)
Translates to: GTLAPLTLRGLLPLP*RWGHKERTRSWARG
Trigger: CCCTCTGGCCCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCAAGAGACCCCTGAGAGTCAATGGTGCTAACGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp TGGCTTTGGCAATTTCTTCCTCAGTATGACGACTTCCTCCAGGGATaGCCTGGGCAGCTACCGCTCACCCTCCTGGTGGATGGTTCTGAC +
Preference number: 1 (lower is better)
Translates to: WLWQFLPQYDDFLQG*PGQLPLTLLVDGSD
Trigger: GTCAGAACCATCCACCAGGAGGGTGAGCGGTAGCTGCCCAGGGCATCCCTGGAGGAAGTCGTCATACTGAGGAAGAAATTGCCAAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp GAGAACGTACATAAGAGTGGCGCCTGTGATGGCCTAGACAGGACCTaGAGTCAGAGTCTAGGCCAACTGACTTACTCCCCTTGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: ENVHKSGACDGLDRT*SQSLGQLTYSPWAW
Trigger: CCAGGCCCAAGGGGAGTAAGTCAGTTGGCCTAGACTCTGACTCCAGGTCCTGTCTAGGCCATCACAGGCGCCACTCTTATGTACGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp CATCTGCAAGGAGGAATCAGTGCCACGCAGCAAGAACAAGAGGCCTaGTCTCCTCCACAGAATCATCTACCCATGTGCCCCTCCCTCACC +
Preference number: 1 (lower is better)
Translates to: HLQGGISATQQEQEA*SPPQNHLPMCPSLT
Trigger: GGTGAGGGAGGGGCACATGGGTAGATGATTCTGTGGAGGAGATCAGGCCTCTTGTTCTTGCTGCGTGGCACTGATTCCTCCTTGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp CATCCACCCTCCAGATATGTCTGTTGTCTGCACGGAGTGCATCTGTaGGGGCAGAGGAAACCTGCGACCCTCTGGTTCCACAACCCTATG +
Preference number: 1 (lower is better)
Translates to: HPPSRYVCCLHGVHL*GQRKPATLWFHNPM
Trigger: CATAGGGTTGTGGAACCAGAGGGTCGCAGGTTTCCTCTGCCCTCACAGATGCACTCCGTGCAGACAACAGACATATCTGGAGGGTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp ACCACTTCCATCCACCCTCCAGATATGTCTGTTGTCTGCACGGAGTaGATCTGTGAGGGCAGAGGAAACCTGCGACCCTCTGGTTCCACA +
Preference number: 1 (lower is better)
Translates to: TTSIHPPDMSVVCTE*ICEGRGNLRPSGST
Trigger: TGTGGAACCAGAGGGTCGCAGGTTTCCTCTGCCCTCACAGATGCACTCCGTGCAGACAACAGACATATCTGGAGGGTGGATGGAAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp TTAGCACCATTGACTCTCAGGGGTCTCTTGCCACTGCCATGGAGGTaGGGACATAAGGAGAGGACTAGAAGCTGGGCCAGAGGGAACAGA +
Preference number: 1 (lower is better)
Translates to: LAPLTLRGLLPLPWR*GHKERTRSWARGNR
Trigger: TCTGTTCCCTCTGGCCCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCAAGAGACCCCTGAGAGTCAATGGTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp TTGGCTGAGCTGCTCCCTGATGAGGGAGAACAGGCTTACAGAATCTaGCTGAAGCATCTCTGCTGCTGGCATTCGTCTCTGCCTGTCTTC +
Preference number: 1 (lower is better)
Translates to: LAELLPDEGEQAYRI*LKHLCCWHSSLPVF
Trigger: GAAGACAGGCAGAGACGAATGCCAGCAGCAGAGATGCTTCAGGCAGATTCTGTAAGCCTGTTCTCCCTCATCAGGGAGCAGCTCAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp ATAGCAGCCACCTTCAGGAGGAACACCAGACTTCCTGGACCAGCCTaGAAGGAGCCCACTGAACTCAGCAGCCCAGAGATTTTCTTCTCT +
Preference number: 1 (lower is better)
Translates to: IAATFRRNTRLPGPA*KEPTELSSPEIFFS
Trigger: AGAGAAGAAAATCTCTGGGCTGCTGAGTTCAGTGGGCTCCTTGCAGGCTGGTCCAGGAAGTCTGGTGTTCCTCCTGAAGGTGGCTGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp GGCAACACTCAAGTCACAAGGACCCCAAGCACCCTTCACACTTCTTaGTCTTCCATTCAGCAGCCTGAAGCCCAAGAGGGAAAATGGCCA +
Preference number: 1 (lower is better)
Translates to: GNTQVTRTPSTLHTS*SSIQQPEAQEGKWP
Trigger: TGGCCATTTTCCCTCTTGGGCTTCAGGCTGCTGAATGGAAGATCAAGAAGTGTGAAGGGTGCTTGGGGTCCTTGTGACTTGAGTGTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp CTACTTTACAGAATTAATCCAGACCTGTCGCCAGGGTTGTGGTCTTaGGGACGTGAAATGTATCCGCCCAACACAGCCACCCAGGTGCTG +
Preference number: 1 (lower is better)
Translates to: LLYRINPDLSPGLWS*GREMYPPNTATQVL
Trigger: CAGCACCTGGGTGGCTGTGTTGGGCGGATACATTTCACGTCCTCAAGACCACAACCCTGGCGACAGGTCTGGATTAATTCTGTAAAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp CCTCCTGGTGAGCCTGTGTGGTCAGGACATAACACCCAATATCTCTaGGTCTCCGGGGATACAATTTCATCCTCTGCCACAGAAGTGACT +
Preference number: 1 (lower is better)
Translates to: PPGEPVWSGHNTQYL*VSGDTISSSATEVT
Trigger: AGTCACTTCTGTGGCAGAGGATGAAATTGTATCCCCGGAGACTCAGAGATATTGGGTGTTATGTCCTGACCACACAGGCTCACCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp TCTGCAGGTGGTTGTGGTGGTGGTGGTGGTGATGCTGTGTGTATGTaGCAGAGAGAAAGTGAGAACGTACATAAGAGTGGCGCCTGTGAT +
Preference number: 1 (lower is better)
Translates to: SAGGCGGGGGDAVCM*QRESENVHKSGACD
Trigger: ATCACAGGCGCCACTCTTATGTACGTTCTCACTTTCTCTCTGTCACATACACACAGCATCACCACCACCACCACCACAACCACCTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp TGGGCACATCTGATAAGTGTGCCCTTTATAATGCGTGCCTTCCTGTaGGGTAGGGAGGAAATGGGACTCATCGCCACCTGTTATGGAGGA +
Preference number: 1 (lower is better)
Translates to: WAHLISVPFIMRAFL*GREEMGLIATCYGG
Trigger: TCCTCCATAACAGGTGGCGATGAGTCCCATTTCCTCCCTACCTCACAGGAAGGCACGCATTATAAAGGGCACACTTATCAGATGTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp CAGAGCAGCGTTTGCCGGCATGCTTTTCAGTGGCAACCAGAAAAGTaGTTACTCCAGGTGCATAGATTCGGGAAACCATGCAACTTGAGC +
Preference number: 1 (lower is better)
Translates to: QSSVCRHAFQWQPEK*LLQVHRFGKPCNLS
Trigger: GCTCAAGTTGCATGGTTTCCCGAATCTATGCACCTGGAGTAAGCACTTTTCTGGTTGCCACTGAAAAGCATGCCGGCAAACGCTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp CTTGGGAACAGATTCTGTTTCTTGGTTCTTGTGGTACTGTCAGCTTaGTCACCTGCTGGACATAGCAGCCACCTTCAGGAGGAACACCAG +
Preference number: 1 (lower is better)
Translates to: LGNRFCFLVLVVLSA*SPAGHSSHLQEEHQ
Trigger: CTGGTGTTCCTCCTGAAGGTGGCTGCTATGTCCAGCAGGTGATCAAGCTGACAGTACCACAAGAACCAAGAAACAGAATCTGTTCCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp GGTCTTGAGGACGTGAAATGTATCCGCCCAACACAGCCACCCAGGTaGTGGGTTCAAATCTCGATAAACTACATAGGGGTATATAGGTGG +
Preference number: 1 (lower is better)
Translates to: GLEDVKCIRPTQPPR*WVQISINYIGVYRW
Trigger: CCACCTATATACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGGGCGGATACATTTCACGTCCTCAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp CTTGAGGACGTGAAATGTATCCGCCCAACACAGCCACCCAGGTGCTaGGTTCAAATCTCGATAAACTACATAGGGGTATATAGGTGGGGA +
Preference number: 1 (lower is better)
Translates to: LEDVKCIRPTQPPRC*VQISINYIGVYRWG
Trigger: TCCCCACCTATATACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGGGCGGATACATTTCACGTCCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp AGCCCAGAGATTTTCTTCTCTGGTGAAAGCCCACCTTTGCAGTTGTaGACCAAGTATCTGTCTCCAAAAGTTCCAGCCACATCTGGGCAC +
Preference number: 1 (lower is better)
Translates to: SPEIFFSGESPPLQL*TKYLSPKVPATSGH
Trigger: GTGCCCAGATGTGGCTGGAACTTTTGGAGACAGATACTTGGTTCACAACTGCAAAGGTGGGCTTTCACCAGAGAAGAAAATCTCTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp AGGTGCTGGGTTCAAATCTCGATAAACTACATAGGGGTATATAGGTaGGGAACGTTAGCACCATTGACTCTCAGGGGTCTCTTGCCACTG +
Preference number: 1 (lower is better)
Translates to: RCWVQISINYIGVYR*GTLAPLTLRGLLPL
Trigger: CAGTGGCAAGAGACCCCTGAGAGTCAATGGTGCTAACGTTCCCCACCTATATACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp GCAGTTGTGAACCAAGTATCTGTCTCCAAAAGTTCCAGCCACATCTaGGCACATCTGATAAGTGTGCCCTTTATAATGCGTGCCTTCCTG +
Preference number: 1 (lower is better)
Translates to: AVVNQVSVSKSSSHI*AHLISVPFIMRAFL
Trigger: CAGGAAGGCACGCATTATAAAGGGCACACTTATCAGATGTGCCCAGATGTGGCTGGAACTTTTGGAGACAGATACTTGGTTCACAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp GCAGAAAGACTGGACAAAGACATGAAGCCATTTGTTCCGGTTCTTTaGTGGAGGGACAGAAGAAAGGGAAGTACTGGTTTCAATTCCCCA +
Preference number: 1 (lower is better)
Translates to: AERLDKDMKPFVPVL*WRDRRKGSTGFNSP
Trigger: TGGGGAATTGAAACCAGTACTTCCCTTTCTTCTGTCCCTCCACCAAAGAACCGGAACAAATGGCTTCATGTCTTTGTCCAGTCTTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp AGAACAGAAATCCTTTCATTAGACCCTGTCTTCAAGAGCCTGGATTaGAATGTGGCCATCTTGAGTAGGGGTGAGGAGGAATCTACTTTT +
Preference number: 1 (lower is better)
Translates to: RTEILSLDPVFKSLD*NVAILSRGEEESTF
Trigger: AAAAGTAGATTCCTCCTCACCCCTACTCAAGATGGCCACATTTCAATCCAGGCTCTTGAAGACAGGGTCTAATGAAAGGATTTCTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 90 bp CTCTTGCTCTTGCTTTTGGGTCAGAGAGATAGAACATTCATTCCTTaGGAACAGATTCTGTTTCTTGGTTCTTGTGGTACTGTCAGCTTG +
Preference number: 1 (lower is better)
Translates to: LLLLLLGQRDRTFIP*EQILFLGSCGTVSL
Trigger: CAAGCTGACAGTACCACAAGAACCAAGAAACAGAATCTGTTCCCAAGGAATGAATGTTCTATCTCTCTGACCCAAAAGCAAGAGCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 90 bp AAAAGTGCTTACTCCAGGTGCATAGATTCGGGAAACCATGCAACTTaGGCCAAAATGAAACCAATTAGAGGCTTAGTAAATGGGTTCCAG +
Preference number: 1 (lower is better)
Translates to: KSAYSRCIDSGNHAT*AKMKPIRGLVNGFQ
Trigger: CTGGAACCCATTTACTAAGCCTCTAATTGGTTTCATTTTGGCTCAAGTTGCATGGTTTCCCGAATCTATGCACCTGGAGTAAGCACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 90 bp TTTCTTCTGTCCTTTGTGACCCCACTGGCCTTTATTGCTGAATCTTaGTGTTCCCTTGAGGGAAGGACTTCTGTTTATAATTCTTTGGAT +
Preference number: 1 (lower is better)
Translates to: FLLSFVTPLAFIAES*CSLEGRTSVYNSLD
Trigger: ATCCAAAGAATTATAAACAGAAGTCCTTCCCTCAAGGGAACAGCAAGATTCAGCAATAAAGGCCAGTGGGGTCACAAAGGACAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp GAGAGGCGCACAAGGGGAAAGCTCTCCTCGGCCACCCGCTCCCCAGGACGTACTCTCACACTTCCGCCCTaGAGGCCTTCTCCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: ERRTRGKLSSATRSPGRTLTLPP*RPSPGS
Trigger: TGACCCTGGAGAAGGCCTCCAGGGCGGAAGTGTGAG...AGTACGTCCTGGGGAGCGGGTGGCCGAGGAGAGCTTTCCCCTTGTGCGCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp GGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCATCCTCCTCACTGGGCTaGCCACCTCAGGCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: GSSLDGLTAKPLQLQSLPSSSLG*PPQAWP
Trigger: GGGCCAGGCCTGAGGTGGCCAGCCCAGTGAGGAGGA...TGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp AAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCGAGCCACGGAGCCACTaGCCACCTCTGCCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: KGVLPGEEALWMGSLPNPEPRSH*PPLPSS
Trigger: GGAGGAAGGCAGAGGTGGCCAGTGGCTCCGTGGCTC...GGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp CAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCAGGGGTCCCTCAGTCTaGCCACGGCAAGACAGTCCC +
Preference number: 2 (lower is better)
Translates to: QGSSPGGGSSLDGLTAKPRGPSV*PRQDSP
Trigger: GGGACTGTCTTGCCGTGGCCAGACTGAGGGACCCCT...GGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 90 bp AAGTCAGAGGCCCAGGGCGCAGGGTCTGCGAATGCTGGGGCTGCTTaGGCCTTTCCCTATTCCCTGGGCTCATCCAAGGGCCTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: KSEAQGAGSANAGAA*AFPYSLGSSKGLEE
Trigger: CTCCTCTAGGCCCTTGGATGAGCCCAGGGAATAGGGAAAGGCCAAAGCAGCCCCAGCATTCGCAGACCCTGCGCCCTGGGCCTCTGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR GCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCAGTCTCTGGAAGGCATaGGGCAGGTCCTGGGGTTCC +
Preference number: 2 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSSLWKA*GRSWGS
Trigger: GGAACCCCAGGACCTGCCGCATGCCTTCCAGAGACT...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR CCA 90 bp AAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCGGGCTTCTCAGTCTCTaGAAGGCATGCGGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: KGVLPGEEALWMGSLPNPGLLSL*KACGRS
Trigger: GGACCTGCCGCATGCCTTCCAGAGACTGAGAAGCCC...GGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp GGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCATGCCTTCCTCCTCACTaGGCTGGCCACCTCAGGCCT +
Preference number: 2 (lower is better)
Translates to: GSSLDGLTAKPLQLQSLPCLPPH*AGHLRP
Trigger: AGGCCTGAGGTGGCCAGCCCAGTGAGGAGGAAGGCA...TGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp GGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCGGGCTATTCTGTCCCTaGGGAGCTAGAGGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: GGGSSLDGLTAKPLQLQSGLFCP*GARGGL
Trigger: CAGACCCCCTCTAGCTCCCCAGGGACAGAATAGCCC...GGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp CCCTTGTGTGGCTGGGGCCTCTCTCCAAGGAGGTCTGAGAATTGGAAGCTAATGAGGCCTGGGACCTGCTaGGGGCTTGATGGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: PLCGWGLSPRRSENWKLMRPGTC*GLDGGA
Trigger: GGCCCCTCCATCAAGCCCCCAGCAGGTCCCAGGCCT...CATTAGCTTCCAATTCTCAGACCTCCTTGGAGAGAGGCCCCAGCCACACAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR CCA 90 bp TCTGTGATGCTGGCAAGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCGGGCTTCTCAGTCTCTaGAAGGCATGCGGCAGGTCC +
Preference number: 2 (lower is better)
Translates to: SVMLARRHRHHEHGWVRAGLLSL*KACGRS
Trigger: GGACCTGCCGCATGCCTTCCAGAGACTGAGAAGCCC...GGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCTTGCCAGCATCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR CCA 90 bp TCTGTGATGCTGGCAAGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCCTCACACTTCCGCCCTaGAGGCCTTCTCCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: SVMLARRHRHHEHGWVRALTLPP*RPSPGS
Trigger: TGACCCTGGAGAAGGCCTCCAGGGCGGAAGTGTGAG...GGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCTTGCCAGCATCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR CCA 90 bp ACAAGAAGCCCCTTGGGTCCTGTGGGCCAGGGTCCTAGGCAACACTCAAGTCACGGCCCAGGAGGATGCTaGCAGGGGGCTGGAAAAGGA +
Preference number: 2 (lower is better)
Translates to: TRSPLGPVGQGPRQHSSHGPGGC*QGAGKG
Trigger: TCCTTTTCCAGCCCCCTGCCAGCATCCTCCTGGGCC...GTGACTTGAGTGTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGCTTCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp GACTCTCCTATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTAGGCCTGGCCCCACCTaGCCCAGGAGGATGCTGGCA +
Preference number: 2 (lower is better)
Translates to: DSPILGPCPLYPGHLFTCRPGPT*PRRMLA
Trigger: TGCCAGCATCCTCCTGGGCCAGGTGGGGCCAGGCCT...ACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 90 bp GAAGAGTCCCCCGAAGCTCTCAGGGCAGGAAAGAAGTTTCACTCCTaGGCCTCCCTGGGGCTTCTCAGTCTCTGGAAGGCATGCGGCAGG +
Preference number: 2 (lower is better)
Translates to: EESPEALRAGKKFHS*ASLGLLSLWKACGR
Trigger: CCTGCCGCATGCCTTCCAGAGACTGAGAAGCCCCAGGGAGGCCAAGGAGTGAAACTTCTTTCCTGCCCTGAGAGCTTCGGGGGACTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR GCA 90 bp CAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTCCAGGGTCAGGGCTaGTGGAAGTTCTCTGCTAGA +
Preference number: 2 (lower is better)
Translates to: QGSSPGGGSSLDGLTAKPLQGQG*WKFSAR
Trigger: TCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAG...GGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp TGCCACTGCCATGGAGGTGGGGACATAAGGAGAGGACTAGAAGCTGGGCCAGAGAGACAAGAAGCCCCTTaGGTCCTGTGGGCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: CHCHGGGDIRRGLEAGPERQEAP*VLWARV
Trigger: GACCCTGGCCCACAGGACCCAAGGGGCTTCTTGTCT...CTCTGGCCCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp TCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTCCTAGCCCAAGGCGGAGGCACACAGGAGGCTaGTGCCCTCGGGTGAGAGTC +
Preference number: 2 (lower is better)
Translates to: SARAASFPFSNSSPSPRRRHTGG*CPRVRV
Trigger: GACTCTCACCCGAGGGCATCAGCCTCCTGTGTGCCT...CCGCCTTGGGCTAGGAGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR CCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTAGGCCTGGGACCTGCTaGGGGCTTGATGGAGGGGCC +
Preference number: 2 (lower is better)
Translates to: GCWKFSARAASFPFSNSSRPGTC*GLDGGA
Trigger: GGCCCCTCCATCAAGCCCCCAGCAGGTCCCAGGCCT...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR CCA 90 bp AGCAACAGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAACTCCTTGGCCTCCCTaGGGCTTCTCAGTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: SNSSPSPRRHMPHAVTLRTPWPP*GFSVSG
Trigger: TCCAGAGACTGAGAAGCCCCAGGGAGGCCAAGGAGT...TCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCTGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR CCA 90 bp GGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCACAGGGTCAGGGCTGCTaGAAGTTCTCTGCTAGAGCA +
Preference number: 2 (lower is better)
Translates to: GSSLDGLTAKPLQLQSLPQGQGC*KFSARA
Trigger: TGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTG...TGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp AAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCCCTGGTGAGCCTGTGTaGTCAGGACATAACACCCAA +
Preference number: 2 (lower is better)
Translates to: KGVLPGEEALWMGSLPNPPGEPV*SGHNTQ
Trigger: TTGGGTGTTATGTCCTGACCACACAGGCTCACCAGG...GGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp GTAGGGAGGAAATGGGACTCATCGCCACCTGTTATGGAGGAGGCTGGGAGAGAGAAGGGGCTGCCGGCTTaGAGGCAGAGGACAACTGGA +
Preference number: 2 (lower is better)
Translates to: VGRKWDSSPPVMEEAGREKGLPA*RQRTTG
Trigger: TCCAGTTGTCCTCTGCCTCCAAGCCGGCAGCCCCTT...CTCTCTCCCAGCCTCCTCCATAACAGGTGGCGATGAGTCCCATTTCCTCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 90 bp GAGAGGCCCACATTCCAAGGAAAGGGGAGCCCTGACTCTCCTATCTaGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTCAG +
Preference number: 2 (lower is better)
Translates to: ERPTFQGKGSPDSPI*GPCPLYPGHLFTCQ
Trigger: CTGACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTCAGGGCTCCCCTTTCCTTGGAATGTGGGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 90 bp CCCTTGCTTCTCCCAGGTTTTGGGCGAACCAGCCGAGGAAGACTTTaGCCCTCCCTAGTTGCCCAGAGAGGCCCACATTCCAAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: PLLLPGFGRTSRGRL*PSLVAQRGPHSKER
Trigger: CCTTTCCTTGGAATGTGGGCCTCTCTGGGCAACTAGGGAGGGCAAAAGTCTTCCTCGGCTGGTTCGCCCAAAACCTGGGAGAAGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCCTCTCCAAGGAGGTCTaGGAATTGGAAGCTAATGGG +
Preference number: 2 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSLSKEV*ELEANG
Trigger: CCCATTAGCTTCCAATTCTCAGACCTCCTTGGAGAG...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR TCA 90 bp TATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTCAGAAGGGGCCTCCCCACATCTGTaGTGCTGGCAAGGAGGCACA +
Preference number: 2 (lower is better)
Translates to: YLGALPSLPRSPVYLSEGASPHL*CWQGGT
Trigger: TGTGCCTCCTTGCCAGCATCACAGATGTGGGGAGGC...CCCTTCTGACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp GTGAGCCTGTGTGGTCAGGACATAACACCCAATATCTCTGAGTCTCCGGGGATACGGCAAGACAGTCCCTaGGGAGGGGAGTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: VSLCGQDITPNISESPGIRQDSP*GGESGP
Trigger: AGGCCCTGACTCCCCTCCTCAGGGACTGTCTTGCCG...TATCCCCGGAGACTCAGAGATATTGGGTGTTATGTCCTGACCACACAGGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp TGCCACTGCCATGGAGGTGGGGACATAAGGAGAGGACTAGAAGCTGGGCCAGAGAACCTTTCCTCCTGGTaGGCCTGTGTGGTCAGGACA +
Preference number: 2 (lower is better)
Translates to: CHCHGGGDIRRGLEAGPENLSSW*ACVVRT
Trigger: TGTCCTGACCACACAGGCTCACCAGGAGGAAAGGTT...CTCTGGCCCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp TGCCACTGCCATGGAGGTGGGGACATAAGGAGAGGACTAGAAGCTGGGCCAGAGCCACTCAGAACACTTTaGCCTTGGGACCCCACCCAT +
Preference number: 2 (lower is better)
Translates to: CHCHGGGDIRRGLEAGPEPLRTL*PWDPTH
Trigger: ATGGGTGGGGTCCCAAGGTCAAAGTGTTCTGAGTGG...CTCTGGCCCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp GATGAGGGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTTGCGGCACAGTGGGCACTaGCCACTCCAGGGATGGCCT +
Preference number: 2 (lower is better)
Translates to: DEGRNQPGLSGTEKVRALRHSGH*PLQGWP
Trigger: AGGCCATCCCTGGAGTGGTCAGTGCCCACTGTGCCG...CAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp CCTCATAAAGACAACCTGAATCCCACCCAATCTGCCCAAAGCCCAGGAAAGGCCGGGTTCCCCCTTGTGTaGCTGGGGCCTCTCTCCAAG +
Preference number: 2 (lower is better)
Translates to: PHKDNLNPTQSAQSPGKAGFPLV*LGPLSK
Trigger: CTTGGAGAGAGGCCCCAGCCACACAAGGGGGAACCC...GGCCTTTCCTGGGCTTTGGGCAGATTGGGTGGGATTCAGGTTGTCTTTATGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCGCATGCGGCAGGTCCTaGGGTTCCCCCTTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGACGRS*GSPLCG
Trigger: GCCACACAAGGGGGAACCCCAGGACCTGCCGCATGC...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR CCA 90 bp GTGAGCCTGTGTGGTCAGGACATAACACCCAATATCTCTGAGTCTCCGGGGATAAGGGGAGTCAGGGCCTaGGGAACAGGCCTCCCCACA +
Preference number: 2 (lower is better)
Translates to: VSLCGQDITPNISESPGIRGVRA*GTGLPT
Trigger: TGTGGGGAGGCCTGTTCCCCAGGCCCTGACTCCCCT...TATCCCCGGAGACTCAGAGATATTGGGTGTTATGTCCTGACCACACAGGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 90 bp AGACAGGACCTGGAGTCAGAGTCTAGGCCAACTGACTTACTCCCCTaGGGCCTGGCTGTAGGAGGGAAGAGAGGCAGAACTGCAAGGAGT +
Preference number: 2 (lower is better)
Translates to: RQDLESESRPTDLLP*GLAVGGKRGRTARS
Trigger: ACTCCTTGCAGTTCTGCCTCTCTTCCCTCCTACAGCCAGGCCCAAGGGGAGTAAGTCAGTTGGCCTAGACTCTGACTCCAGGTCCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp GACTCTCCTATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTGAGCTAGAGGGGGTCTaGCTTTGCTCCTTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: DSPILGPCPLYPGHLFTCELEGV*LCSLAE
Trigger: CTCAGCCAAGGAGCAAAGTCAGACCCCCTCTAGCTC...ACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR GCA 90 bp TGCCACTGCCATGGAGGTGGGGACATAAGGAGAGGACTAGAAGCTGGGCCAGAGTGCCTGAAGCATCTCTaGTGCTGGCATTCGTCTCTG +
Preference number: 2 (lower is better)
Translates to: CHCHGGGDIRRGLEAGPECLKHL*CWHSSL
Trigger: CAGAGACGAATGCCAGCAGCAGAGATGCTTCAGGCA...CTCTGGCCCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTTCCCCCTTGTGTGGCTaGGGCCTCTCTCCAAGGAGG +
Preference number: 2 (lower is better)
Translates to: GCWKFSARAASFPFSNSSSPLCG*GLSPRR
Trigger: CCTCCTTGGAGAGAGGCCCCAGCCACACAAGGGGGA...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR CCA 90 bp ACCAGCACATCTCCAGCCACTGGGCAAAATGCATATTCAGTCTGTAGACAGGACGCATGCGGCAGGTCCTaGGGTTCCCCCTTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: TSTSPATGQNAYSVCRQDACGRS*GSPLCG
Trigger: GCCACACAAGGGGGAACCCCAGGACCTGCCGCATGC...GTCCTGTCTACAGACTGAATATGCATTTTGCCCAGTGGCTGGAGATGTGCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 90 bp CTCAGAGCCACCATACCACTTCCATCCACCCTCCAGATATGTCTGTaGTCTGCACGGAGTGCATCTGTGAGGGCAGAGGAAACCTGCGAC +
Preference number: 2 (lower is better)
Translates to: LRATIPLPSTLQICL*SARSASVRAEETCD
Trigger: GTCGCAGGTTTCCTCTGCCCTCACAGATGCACTCCGTGCAGACAACAGACATATCTGGAGGGTGGATGGAAGTGGTATGGTGGCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp GATGAGGGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTTGCACGGAGTGCATCTGTaGGGGCAGAGGAAACCTGCG +
Preference number: 2 (lower is better)
Translates to: DEGRNQPGLSGTEKVRALHGVHL*GQRKPA
Trigger: CGCAGGTTTCCTCTGCCCTCACAGATGCACTCCGTG...CAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR GCA 90 bp ACAAGAAGCCCCTTGGGTCCTGTGGGCCAGGGTCCTAGGCAACACTCAAGTCACCAGGCTTACAGAATCTaGCTGAAGCATCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: TRSPLGPVGQGPRQHSSHQAYRI*LKHLCC
Trigger: GCAGCAGAGATGCTTCAGGCAGATTCTGTAAGCCTG...GTGACTTGAGTGTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGCTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR GCA 90 bp ACAAGAAGCCCCTTGGGTCCTGTGGGCCAGGGTCCTAGGCAACACTCAAGTCACGCAAGGAGGAATCAGTaGCACGCAGCAAGAACAAGA +
Preference number: 2 (lower is better)
Translates to: TRSPLGPVGQGPRQHSSHARRNQ*HAARTR
Trigger: TCTTGTTCTTGCTGCGTGGCACTGATTCCTCCTTGC...GTGACTTGAGTGTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGCTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp CCAACACAGCCACCCAGGTGCTGGGTTCAAATCTCGATAAACTACATAGGGGTATCCCCCTTGTGTGGCTaGGGCCTCTCTCCAAGGAGG +
Preference number: 2 (lower is better)
Translates to: PTQPPRCWVQISINYIGVSPLCG*GLSPRR
Trigger: CCTCCTTGGAGAGAGGCCCCAGCCACACAAGGGGGA...TACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp GATGAGGGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTTGCGCTCACCCTCCTGGTaGATGGTTCTGACCTCCTGG +
Preference number: 2 (lower is better)
Translates to: DEGRNQPGLSGTEKVRALRSPSW*MVLTSW
Trigger: CCAGGAGGTCAGAACCATCCACCAGGAGGGTGAGCG...CAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTCTCATGCGGTTACCCTaGGAAGAGTCCCCCGAAGCT +
Preference number: 2 (lower is better)
Translates to: GCWKFSARAASFPFSNSSLMRLP*EESPEA
Trigger: AGCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAG...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR TCA 90 bp ACCAGCACATCTCCAGCCACTGGGCAAAATGCATATTCAGTCTGTAGACAGGACAGGAAAGGGGAGCCCTaGCTCTCCTATCTTGGGGCC +
Preference number: 2 (lower is better)
Translates to: TSTSPATGQNAYSVCRQDRKGEP*LSYLGA
Trigger: GGCCCCAAGATAGGAGAGTCAGGGCTCCCCTTTCCT...GTCCTGTCTACAGACTGAATATGCATTTTGCCCAGTGGCTGGAGATGTGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp TCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTCCTAGCCCAAGGCGGAGAAGTTTCACTCCTTaGCCTCCCTGGGGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: SARAASFPFSNSSPSPRRRSFTP*PPWGFS
Trigger: TGAGAAGCCCCAGGGAGGCCAAGGAGTGAAACTTCT...CCGCCTTGGGCTAGGAGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR CAA 90 bp TTGGAGGCAGAGGACAACTGGACCTCCACTCAGAACACTTTGACCTaGGGACCCCACCCATGTTCCCAAAGCCAGGGCTCAAGATATCTA +
Preference number: 2 (lower is better)
Translates to: LEAEDNWTSTQNTLT*GPHPCSQSQGSRYL
Trigger: TAGATATCTTGAGCCCTGGCTTTGGGAACATGGGTGGGGTCCCAAGGTCAAAGTGTTCTGAGTGGAGGTCCAGTTGTCCTCTGCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp CCAACACAGCCACCCAGGTGCTGGGTTCAAATCTCGATAAACTACATAGGGGTATTGCAGCCTCGCAGGTaGCCGCTAGGGAAACACATG +
Preference number: 2 (lower is better)
Translates to: PTQPPRCWVQISINYIGVLQPRR*PLGKHM
Trigger: CATGTGTTTCCCTAGCGGTCACCTGCGAGGCTGCAA...TACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR GCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCCTCCAGGGTCAGGGCTaGTGGAAGTTCTCTGCTAGA +
Preference number: 2 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGLQGQG*WKFSAR
Trigger: TCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAG...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR GCA 90 bp GGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCATTTATTGCTGAATCTTaGTGTTCCCTTGAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: GSSLDGLTAKPLQLQSLPFIAES*CSLEGR
Trigger: CCTTCCCTCAAGGGAACAGCAAGATTCAGCAATAAA...TGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp TCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTCCTAGCCCAAGGCGGAGGAGGTCTGAGAATTaGAAGCTAATGGGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: SARAASFPFSNSSPSPRRRRSEN*KLMGVG
Trigger: GCCCACACCCATTAGCTTCCAATTCTCAGACCTCCT...CCGCCTTGGGCTAGGAGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR CCA 90 bp ACCAGCACATCTCCAGCCACTGGGCAAAATGCATATTCAGTCTGTAGACAGGACAGGAGTCCTGGGCCCTaGCTAGGGGAAGATTCTAGC +
Preference number: 2 (lower is better)
Translates to: TSTSPATGQNAYSVCRQDRSPGP*LGEDSS
Trigger: GCTAGAATCTTCCCCTAGCCAGGGCCCAGGACTCCT...GTCCTGTCTACAGACTGAATATGCATTTTGCCCAGTGGCTGGAGATGTGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp CTCCAAAAGTTCCAGCCACATCTGGGCACATCTGATAAGTGTGCCCTTTATAATAGGCACACAGGAGGCTaGTGCCCTCGGGTGAGAGTC +
Preference number: 2 (lower is better)
Translates to: LQKFQPHLGTSDKCALYNRHTGG*CPRVRV
Trigger: GACTCTCACCCGAGGGCATCAGCCTCCTGTGTGCCT...ATTATAAAGGGCACACTTATCAGATGTGCCCAGATGTGGCTGGAACTTTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp CCAACACAGCCACCCAGGTGCTGGGTTCAAATCTCGATAAACTACATAGGGGTAAACCCTATGCCCCACTaGGGCTCAACTTCCCAGACT +
Preference number: 2 (lower is better)
Translates to: PTQPPRCWVQISINYIGVNPMPH*GSTSQT
Trigger: AGTCTGGGAAGTTGAGCCTCAGTGGGGCATAGGGTT...TACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR GCA 90 bp CCTCATAAAGACAACCTGAATCCCACCCAATCTGCCCAAAGCCCAGGAAAGGCCTGCCAGCATAGAATGTaGCCTTGCTTCTCCCAGGTT +
Preference number: 2 (lower is better)
Translates to: PHKDNLNPTQSAQSPGKACQHRM*PCFSQV
Trigger: AACCTGGGAGAAGCAAGGGCACATTCTATGCTGGCA...GGCCTTTCCTGGGCTTTGGGCAGATTGGGTGGGATTCAGGTTGTCTTTATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTAGAAGTTTCACTCCTTaGCCTCCCTGGGGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: GCWKFSARAASFPFSNSSRSFTP*PPWGFS
Trigger: TGAGAAGCCCCAGGGAGGCCAAGGAGTGAAACTTCT...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR CCA 90 bp CCAACACAGCCACCCAGGTGCTGGGTTCAAATCTCGATAAACTACATAGGGGTAGGGCAGAAACCAGCCTaGCCTCTCTGGAACAGAGAA +
Preference number: 2 (lower is better)
Translates to: PTQPPRCWVQISINYIGVGQKPA*PLWNRE
Trigger: TTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCC...TACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCCTCTCCAAGGAGGTCTaGGAATTGGAAGCTAATGGG +
Preference number: 2 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGLSKEV*ELEANG
Trigger: CCCATTAGCTTCCAATTCTCAGACCTCCTTGGAGAG...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR-3UTR GCA 90 bp CTCCAAAAGTTCCAGCCACATCTGGGCACATCTGATAAGTGTGCCCTTTATAATAGTCTCTGGAAGGCATaGGGCAGGTCCTGGGGTTCC +
Preference number: 2 (lower is better)
Translates to: LQKFQPHLGTSDKCALYNSLWKA*GRSWGS
Trigger: GGAACCCCAGGACCTGCCGCATGCCTTCCAGAGACT...ATTATAAAGGGCACACTTATCAGATGTGCCCAGATGTGGCTGGAACTTTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp CCAACACAGCCACCCAGGTGCTGGGTTCAAATCTCGATAAACTACATAGGGGTATCCTCGCTTTACAGATaGGGAAAACTGGCCCCCTCA +
Preference number: 2 (lower is better)
Translates to: PTQPPRCWVQISINYIGVSSLYR*GKLAPS
Trigger: TGAGGGGGCCAGTTTTCCCCATCTGTAAAGCGAGGA...TACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp ACCAGCACATCTCCAGCCACTGGGCAAAATGCATATTCAGTCTGTAGACAGGACCATGGGTTACATAACTaGAGCAGAGCGCCAGTCCTT +
Preference number: 2 (lower is better)
Translates to: TSTSPATGQNAYSVCRQDHGLHN*SRAPVL
Trigger: AAGGACTGGCGCTCTGCTCCAGTTATGTAACCCATG...GTCCTGTCTACAGACTGAATATGCATTTTGCCCAGTGGCTGGAGATGTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 90 bp AATGACATTCTGATAAAAAGGTTTCAACCTGAGACAAGAAGCCCCTaGGGTCCTGTGGGCCAGGGTCCTAGGCAACACTCAAGTCACAAG +
Preference number: 2 (lower is better)
Translates to: NDILIKRFQPETRSP*GPVGQGPRQHSSHK
Trigger: CTTGTGACTTGAGTGTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGCTTCTTGTCTCAGGTTGAAACCTTTTTATCAGAATGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR TCA 90 bp CCAACACAGCCACCCAGGTGCTGGGTTCAAATCTCGATAAACTACATAGGGGTATTCTTCTGTCCTTTGTaGCCCCACTGGCCTTTATTG +
Preference number: 2 (lower is better)
Translates to: PTQPPRCWVQISINYIGVFFCPL*PHWPLL
Trigger: CAATAAAGGCCAGTGGGGTCACAAAGGACAGAAGAA...TACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 90 bp GGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTaGAGCATCATGAACAACGGGATAAAAATAGCAGTGTTGCCATGG +
Preference number: 2 (lower is better)
Translates to: GRNQPGLSGTEKVRA*SIMNNGIKIAVLPW
Trigger: CCATGGCAACACTGCTATTTTTATCCCGTTGTTCATGATGCTCAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 90 bp GGCAGAAAGACTGGACAAAGACATGAAGCCATTTGTTCCGGTTCTTaGGTGGAGGGACAGAAGAAAGGGAAGTACTGGTTTCAATTCCCC +
Preference number: 2 (lower is better)
Translates to: GRKTGQRHEAICSGS*VEGQKKGKYWFQFP
Trigger: GGGGAATTGAAACCAGTACTTCCCTTTCTTCTGTCCCTCCACCAAAGAACCGGAACAAATGGCTTCATGTCTTTGTCCAGTCTTTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CCA 90 bp GATGAGGGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTTGATAGTTCCTATCCCATaGAAATTTAGAGAAGCGAAC +
Preference number: 2 (lower is better)
Translates to: DEGRNQPGLSGTEKVRALIVPIP*KFREAN
Trigger: GTTCGCTTCTCTAAATTTCCATGGGATAGGAACTAT...CAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 72 bp GCCTGGCCCGAAGTCAGAGGCCCAGGGCGCAGGGTCTaGGAATGCTGGGGCTGCTTTGGCCTTTCCCTATTC +
Preference number: 3 (lower is better)
Translates to: AWPEVRGPGRRV*ECWGCFGLSLF
Trigger: GAATAGGGAAAGGCCAAAGCAGCCCCAGCATTCGCAGACCCTGCGCCCTGGGCCTCTGACTTCGGGCCAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp CTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTaGGAAGAGTCCCCCGAAGCTCTCAGGGCAGGAAAG +
Preference number: 3 (lower is better)
Translates to: LAQGGTCLMRLP*EESPEALRAGK
Trigger: CTTTCCTGCCCTGAGAGCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR TCA 72 bp CACATCTGTGATGCTGGCAAGGAGGCACAGGCATCATaGACACGGGTGGGTCAGGGCCGGGGCTGGAGGAAA +
Preference number: 3 (lower is better)
Translates to: HICDAGKEAQAS*TRVGQGRGWRK
Trigger: TTTCCTCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCTTGCCAGCATCACAGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR TCA 72 bp CCCAGAGAGGCCCACATTCCAAGGAAAGGGGAGCCCTaGCTCTCCTATCTTGGGGCCTTGCCCTCTCTACCC +
Preference number: 3 (lower is better)
Translates to: PREAHIPRKGEP*LSYLGALPSLP
Trigger: GGGTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTCAGGGCTCCCCTTTCCTTGGAATGTGGGCCTCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp CCTGCGACCCTCTGGTTCCACAACCCTATGCCCCACTaGGGCTCAACTTCCCAGACTCACAGAGCCCTGGAC +
Preference number: 3 (lower is better)
Translates to: PATLWFHNPMPH*GSTSQTHRALD
Trigger: GTCCAGGGCTCTGTGAGTCTGGGAAGTTGAGCCTCAGTGGGGCATAGGGTTGTGGAACCAGAGGGTCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp TGGGCAGCTACCGCTCACCCTCCTGGTGGATGGTTCTaGCCTCCTGGGCTCCTCCGTGAAGAGTCAAGGTTC +
Preference number: 3 (lower is better)
Translates to: WAATAHPPGGWF*PPGLLREESRF
Trigger: GAACCTTGACTCTTCACGGAGGAGCCCAGGAGGTCAGAACCATCCACCAGGAGGGTGAGCGGTAGCTGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 72 bp GGGTTGGGGTGTGCCTGGCTAGAAGCTGCTACCTCCTaGTCAGACAATTCCAGCTGCAGTGCTGGCCCCAAC +
Preference number: 3 (lower is better)
Translates to: GLGCAWLEAATS*SDNSSCSAGPN
Trigger: GTTGGGGCCAGCACTGCAGCTGGAATTGTCTGAGCAGGAGGTAGCAGCTTCTAGCCAGGCACACCCCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp TGCTACCTCCTGCTCAGACAATTCCAGCTGCAGTGCTaGCCCCAACCTCAGCCCTGGGTGAAGAAGGGGCTG +
Preference number: 3 (lower is better)
Translates to: CYLLLRQFQLQC*PQPQPWVKKGL
Trigger: CAGCCCCTTCTTCACCCAGGGCTGAGGTTGGGGCCAGCACTGCAGCTGGAATTGTCTGAGCAGGAGGTAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp TTCCTCCCGCCCCTCAGATGGAACACGGGAATGAGCTaGAGGAGGAGAGACGGCTGCCCCAGAAGGGAAAGA +
Preference number: 3 (lower is better)
Translates to: FLPPLRWNTGMS*RRRDGCPRRER
Trigger: TCTTTCCCTTCTGGGGCAGCCGTCTCTCCTCCTTCAGCTCATTCCCGTGTTCCATCTGAGGGGCGGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CAA 90 bp GAGAGGCGCACAAGGGGAAAGCTCTCCTCGGCCACCCGCTCCCCAGGACGTACTAATCTTGCTGTTCCCTaGAGGGAAGGACTTCTGTTT +
Preference number: 3 (lower is better)
Translates to: ERRTRGKLSSATRSPGRTNLAVP*REGLLF
Trigger: AAACAGAAGTCCTTCCCTCAAGGGAACAGCAAGATT...AGTACGTCCTGGGGAGCGGGTGGCCGAGGAGAGCTTTCCCCTTGTGCGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp CCCCTTGTGTGGCTGGGGCCTCTCTCCAAGGAGGTCTaGGAATTGGAAGCTAATGGGTGTGGGCATGAGGAG +
Preference number: 3 (lower is better)
Translates to: PLVWLGPLSKEV*ELEANGCGHEE
Trigger: CTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCTCCTTGGAGAGAGGCCCCAGCCACACAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR TCA 72 bp AAGGGCTATTCTGTCCCTGGGGAGCTAGAGGGGGTCTaGCTTTGCTCCTTGGCTGAGCTGCTCCCTGATGAG +
Preference number: 3 (lower is better)
Translates to: KGYSVPGELEGV*LCSLAELLPDE
Trigger: CTCATCAGGGAGCAGCTCAGCCAAGGAGCAAAGTCAGACCCCCTCTAGCTCCCCAGGGACAGAATAGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp TCCAGACCTGTCGCCAGGGTTGTGGTCTTGAGGACGTaGAATGTATCCGCCCAACACAGCCACCCAGGTGCT +
Preference number: 3 (lower is better)
Translates to: SRPVARVVVLRT*NVSAQHSHPGA
Trigger: AGCACCTGGGTGGCTGTGTTGGGCGGATACATTTCACGTCCTCAAGACCACAACCCTGGCGACAGGTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 72 bp AACTGGCCCCCTCACCCATCTGCAAGGAGGAATCAGTaGCACGCAGCAAGAACAAGAGGCCTGATCTCCTCC +
Preference number: 3 (lower is better)
Translates to: NWPPHPSARRNQ*HAARTRGLISS
Trigger: GGAGGAGATCAGGCCTCTTGTTCTTGCTGCGTGGCACTGATTCCTCCTTGCAGATGGGTGAGGGGGCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 72 bp AGAGGAAACCTGCGACCCTCTGGTTCCACAACCCTATaGCCCACTGAGGCTCAACTTCCCAGACTCACAGAG +
Preference number: 3 (lower is better)
Translates to: RGNLRPSGSTTL*PTEAQLPRLTE
Trigger: CTCTGTGAGTCTGGGAAGTTGAGCCTCAGTGGGGCATAGGGTTGTGGAACCAGAGGGTCGCAGGTTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 72 bp CAATTTCTTCCTCAGTATGACGACTTCCTCCAGGGATaGCCTGGGCAGCTACCGCTCACCCTCCTGGTGGAT +
Preference number: 3 (lower is better)
Translates to: QFLPQYDDFLQG*PGQLPLTLLVD
Trigger: ATCCACCAGGAGGGTGAGCGGTAGCTGCCCAGGGCATCCCTGGAGGAAGTCGTCATACTGAGGAAGAAATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp GCCAGCATAGAATGTGCCCTTGCTTCTCCCAGGTTTTaGGCGAACCAGCCGAGGAAGACTTTTGCCCTCCCT +
Preference number: 3 (lower is better)
Translates to: ASIECALASPRF*ANQPRKTFALP
Trigger: AGGGAGGGCAAAAGTCTTCCTCGGCTGGTTCGCCCAAAACCTGGGAGAAGCAAGGGCACATTCTATGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp GCACCATTGACTCTCAGGGGTCTCTTGCCACTGCCATaGAGGTGGGGACATAAGGAGAGGACTAGAAGCTGG +
Preference number: 3 (lower is better)
Translates to: APLTLRGLLPLP*RWGHKERTRSW
Trigger: CCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCAAGAGACCCCTGAGAGTCAATGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp ACAGAAGTGACTTTTCTAGGATTGCAGCCTCGCAGGTaGCCGCTAGGGAAACACATGCCCTCCAGGAGGCTC +
Preference number: 3 (lower is better)
Translates to: TEVTFLGLQPRR*PLGKHMPSRRL
Trigger: GAGCCTCCTGGAGGGCATGTGTTTCCCTAGCGGTCACCTGCGAGGCTGCAATCCTAGAAAAGTCACTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp TCCAGATATGTCTGTTGTCTGCACGGAGTGCATCTGTaGGGGCAGAGGAAACCTGCGACCCTCTGGTTCCAC +
Preference number: 3 (lower is better)
Translates to: SRYVCCLHGVHL*GQRKPATLWFH
Trigger: GTGGAACCAGAGGGTCGCAGGTTTCCTCTGCCCTCACAGATGCACTCCGTGCAGACAACAGACATATCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp TGGGAGCTCTTGGCTTTGGCAATTTCTTCCTCAGTATaGCGACTTCCTCCAGGGATGCCCTGGGCAGCTACC +
Preference number: 3 (lower is better)
Translates to: WELLALAISSSV*RLPPGMPWAAT
Trigger: GGTAGCTGCCCAGGGCATCCCTGGAGGAAGTCGTCATACTGAGGAAGAAATTGCCAAAGCCAAGAGCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 72 bp ATAGAATGTGGGGTTGGGGTGTGCCTGGCTAGAAGCTaGTACCTCCTGCTCAGACAATTCCAGCTGCAGTGC +
Preference number: 3 (lower is better)
Translates to: IECGVGVCLARS*YLLLRQFQLQC
Trigger: GCACTGCAGCTGGAATTGTCTGAGCAGGAGGTAGCAGCTTCTAGCCAGGCACACCCCAACCCCACATTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 72 bp ATCCACCCTCCAGATATGTCTGTTGTCTGCACGGAGTaGATCTGTGAGGGCAGAGGAAACCTGCGACCCTCT +
Preference number: 3 (lower is better)
Translates to: IHPPDMSVVCTE*ICEGRGNLRPS
Trigger: AGAGGGTCGCAGGTTTCCTCTGCCCTCACAGATGCACTCCGTGCAGACAACAGACATATCTGGAGGGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp TCACCTGTTTACCTGTCAGAAGGGCTATTCTGTCCCTaGGGAGCTAGAGGGGGTCTGACTTTGCTCCTTGGC +
Preference number: 3 (lower is better)
Translates to: SPVYLSEGLFCP*GARGGLTLLLG
Trigger: GCCAAGGAGCAAAGTCAGACCCCCTCTAGCTCCCCAGGGACAGAATAGCCCTTCTGACAGGTAAACAGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp CATAAGAGTGGCGCCTGTGATGGCCTAGACAGGACCTaGAGTCAGAGTCTAGGCCAACTGACTTACTCCCCT +
Preference number: 3 (lower is better)
Translates to: HKSGACDGLDRT*SQSLGQLTYSP
Trigger: AGGGGAGTAAGTCAGTTGGCCTAGACTCTGACTCCAGGTCCTGTCTAGGCCATCACAGGCGCCACTCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp GAAATGGGACTCATCGCCACCTGTTATGGAGGAGGCTaGGAGAGAGGAGGCAATTTGCCAAGGTCAGGAGTC +
Preference number: 3 (lower is better)
Translates to: EMGLIATCYGGG*ERGGNLPRSGV
Trigger: GACTCCTGACCTTGGCAAATTGCCTCCTCTCTCCCAGCCTCCTCCATAACAGGTGGCGATGAGTCCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp ACTCCAGGGATGGCCTGGGGTCCAGAGGATTCACCCTaGCAAGGCAGATACCCTTGTCAGCAATATGGACTT +
Preference number: 3 (lower is better)
Translates to: TPGMAWGPEDSP*QGRYPCQQYGL
Trigger: AAGTCCATATTGCTGACAAGGGTATCTGCCTTGTCAGGGTGAATCCTCTGGACCCCAGGCCATCCCTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 72 bp CTGCTCCCTGATGAGGGAGAACAGGCTTACAGAATCTaGCTGAAGCATCTCTGCTGCTGGCATTCGTCTCTG +
Preference number: 3 (lower is better)
Translates to: LLPDEGEQAYRI*LKHLCCWHSSL
Trigger: CAGAGACGAATGCCAGCAGCAGAGATGCTTCAGGCAGATTCTGTAAGCCTGTTCTCCCTCATCAGGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CAA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCGCTGGAAAAGGATTCTaGCCCCAGGTCCTGGAATCC +
Preference number: 3 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGAGKGF*PQVLES
Trigger: GGATTCCAGGACCTGGGGCAAGAATCCTTTTCCAGC...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR TCA 72 bp CAAGTCACAAGGACCCCAAGCACCCTTCACACTTCTTaGTCTTCCATTCAGCAGCCTGAAGCCCAAGAGGGA +
Preference number: 3 (lower is better)
Translates to: QVTRTPSTLHTS*SSIQQPEAQEG
Trigger: TCCCTCTTGGGCTTCAGGCTGCTGAATGGAAGATCAAGAAGTGTGAAGGGTGCTTGGGGTCCTTGTGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp AGAATTAATCCAGACCTGTCGCCAGGGTTGTGGTCTTaGGGACGTGAAATGTATCCGCCCAACACAGCCACC +
Preference number: 3 (lower is better)
Translates to: RINPDLSPGLWS*GREMYPPNTAT
Trigger: GGTGGCTGTGTTGGGCGGATACATTTCACGTCCTCAAGACCACAACCCTGGCGACAGGTCTGGATTAATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp ACCGCTAGGGAAACACATGCCCTCCAGGAGGCTCTCTaGCCTCTGTATCAAGGTAACTTTTTCTGCCCATCT +
Preference number: 3 (lower is better)
Translates to: TARETHALQEAL*PLYQGNFFCPS
Trigger: AGATGGGCAGAAAAAGTTACCTTGATACAGAGGCCAGAGAGCCTCCTGGAGGGCATGTGTTTCCCTAGCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp GGAGCTGTGCAAAGGGAAGCCCATGGGTTACATAACTaGAGCAGAGCGCCAGTCCTTGAGATCTCTTCTAGA +
Preference number: 3 (lower is better)
Translates to: GAVQREAHGLHN*SRAPVLEISSR
Trigger: TCTAGAAGAGATCTCAAGGACTGGCGCTCTGCTCCAGTTATGTAACCCATGGGCTTCCCTTTGCACAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp TCTTCCATTCAGCAGCCTGAAGCCCAAGAGGGAAAATaGCCATGGGAAGTCCTCGCTTTACAGATGGGGAAA +
Preference number: 3 (lower is better)
Translates to: SSIQQPEAQEGK*PWEVLALQMGK
Trigger: TTTCCCCATCTGTAAAGCGAGGACTTCCCATGGCCATTTTCCCTCTTGGGCTTCAGGCTGCTGAATGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 72 bp GACGTGAAATGTATCCGCCCAACACAGCCACCCAGGTaGTGGGTTCAAATCTCGATAAACTACATAGGGGTA +
Preference number: 3 (lower is better)
Translates to: DVKCIRPTQPPR*WVQISINYIGV
Trigger: TACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGGGCGGATACATTTCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR-3UTR CAA 90 bp CCAACACAGCCACCCAGGTGCTGGGTTCAAATCTCGATAAACTACATAGGGGTATGGGAGCTCTTGGCTTaGGCAATTTCTTCCTCAGTA +
Preference number: 3 (lower is better)
Translates to: PTQPPRCWVQISINYIGVWELLA*AISSSV
Trigger: TACTGAGGAAGAAATTGCCAAAGCCAAGAGCTCCCA...TACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp AGATTCTGTTTCTTGGTTCTTGTGGTACTGTCAGCTTaGTCACCTGCTGGACATAGCAGCCACCTTCAGGAG +
Preference number: 3 (lower is better)
Translates to: RFCFLVLVVLSA*SPAGHSSHLQE
Trigger: CTCCTGAAGGTGGCTGCTATGTCCAGCAGGTGATCAAGCTGACAGTACCACAAGAACCAAGAAACAGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp ATCCTTTCATTAGACCCTGTCTTCAAGAGCCTGGATTaGAATGTGGCCATCTTGAGTAGGGGTGAGGAGGAA +
Preference number: 3 (lower is better)
Translates to: ILSLDPVFKSLD*NVAILSRGEEE
Trigger: TTCCTCCTCACCCCTACTCAAGATGGCCACATTTCAATCCAGGCTCTTGAAGACAGGGTCTAATGAAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp CTGGACAAAGACATGAAGCCATTTGTTCCGGTTCTTTaGTGGAGGGACAGAAGAAAGGGAAGTACTGGTTTC +
Preference number: 3 (lower is better)
Translates to: LDKDMKPFVPVL*WRDRRKGSTGF
Trigger: GAAACCAGTACTTCCCTTTCTTCTGTCCCTCCACCAAAGAACCGGAACAAATGGCTTCATGTCTTTGTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp GTGAAATGTATCCGCCCAACACAGCCACCCAGGTGCTaGGTTCAAATCTCGATAAACTACATAGGGGTATAT +
Preference number: 3 (lower is better)
Translates to: VKCIRPTQPPRC*VQISINYIGVY
Trigger: ATATACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGGGCGGATACATTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp CATTCCTTGGGAACAGATTCTGTTTCTTGGTTCTTGTaGTACTGTCAGCTTGATCACCTGCTGGACATAGCA +
Preference number: 3 (lower is better)
Translates to: HSLGTDSVSWFL*YCQLDHLLDIA
Trigger: TGCTATGTCCAGCAGGTGATCAAGCTGACAGTACCACAAGAACCAAGAAACAGAATCTGTTCCCAAGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CCA 72 bp GTTCAAATCTCGATAAACTACATAGGGGTATATAGGTaGGGAACGTTAGCACCATTGACTCTCAGGGGTCTC +
Preference number: 3 (lower is better)
Translates to: VQISINYIGVYR*GTLAPLTLRGL
Trigger: GAGACCCCTGAGAGTCAATGGTGCTAACGTTCCCCACCTATATACCCCTATGTAGTTTATCGAGATTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp ATTTTCTTCTCTGGTGAAAGCCCACCTTTGCAGTTGTaGACCAAGTATCTGTCTCCAAAAGTTCCAGCCACA +
Preference number: 3 (lower is better)
Translates to: IFFSGESPPLQL*TKYLSPKVPAT
Trigger: TGTGGCTGGAACTTTTGGAGACAGATACTTGGTTCACAACTGCAAAGGTGGGCTTTCACCAGAGAAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 72 bp TCCTTTGTGACCCCACTGGCCTTTATTGCTGAATCTTaGTGTTCCCTTGAGGGAAGGACTTCTGTTTATAAT +
Preference number: 3 (lower is better)
Translates to: SFVTPLAFIAES*CSLEGRTSVYN
Trigger: ATTATAAACAGAAGTCCTTCCCTCAAGGGAACAGCAAGATTCAGCAATAAAGGCCAGTGGGGTCACAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 72 bp TTATTACAGCAATTAACAGAGCAGCGTTTGCCGGCATaGTTTTCAGTGGCAACCAGAAAAGTGCTTACTCCA +
Preference number: 3 (lower is better)
Translates to: LLQQLTEQRLPA*FSVATRKVLTP
Trigger: TGGAGTAAGCACTTTTCTGGTTGCCACTGAAAAGCATGCCGGCAAACGCTGCTCTGTTAATTGCTGTAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR TCA 72 bp TACTCCAGGTGCATAGATTCGGGAAACCATGCAACTTaGGCCAAAATGAAACCAATTAGAGGCTTAGTAAAT +
Preference number: 3 (lower is better)
Translates to: YSRCIDSGNHAT*AKMKPIRGLVN
Trigger: ATTTACTAAGCCTCTAATTGGTTTCATTTTGGCTCAAGTTGCATGGTTTCCCGAATCTATGCACCTGGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR GCA 72 bp AATAACAATCTCCCTATATATTTCTATGAACCCATATaGTACATGCAAAAAGCCCTTCCCTGGGAGCAGAGA +
Preference number: 3 (lower is better)
Translates to: NNNLPIYFYEPI*YMQKALPWEQR
Trigger: TCTCTGCTCCCAGGGAAGGGCTTTTTGCATGTAGCATATGGGTTCATAGAAATATATAGGGAGATTGTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCGGGGCTGGAGGAAACCGGCAAGACAGTCCCTaGGGAGGGGAGTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RRHRHHEHGWVRAGAGGNRQDSP*GGESGP
Trigger: AGGCCCTGACTCCCCTCCTCAGGGACTGTCTTGCCG...GTTTCCTCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR TCA 90 bp GGCCTGGGGAACAGGCCTCCCCACATCTGTGATGCTGGCAAGGAGGCACAGGCAGAGGCACAGGCATCATaGACACGGGTGGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLGNRPPHICDAGKEAQAEAQAS*TRVGQG
Trigger: GCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTC...TGCCTGTGCCTCCTTGCCAGCATCACAGATGTGGGGAGGCCTGTTCCCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp TCTGTGATGCTGGCAAGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCAGGCCTGGGACCTGCTaGGGGCTTGATGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SVMLARRHRHHEHGWVRARPGTC*GLDGGA
Trigger: GGCCCCTCCATCAAGCCCCCAGCAGGTCCCAGGCCT...GGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCTTGCCAGCATCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp GGCCTGGGGAACAGGCCTCCCCACATCTGTGATGCTGGCAAGGAGGCACAGGCATCCCCCTTGTGTGGCTaGGGCCTCTCTCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLGNRPPHICDAGKEAQASPLCG*GLSPRR
Trigger: CCTCCTTGGAGAGAGGCCCCAGCCACACAAGGGGGA...TGCCTGTGCCTCCTTGCCAGCATCACAGATGTGGGGAGGCCTGTTCCCCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp CTCCTTGGCCTCCCTGGGGCTTCTCAGTCTCTGGAAGGCATGCGGCAGGTCCTGTTCCAGCTGCAGTGCTaGCCCCAACCTCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLGLPGASQSLEGMRQVLFQLQC*PQPQPW
Trigger: CCAGGGCTGAGGTTGGGGCCAGCACTGCAGCTGGAA...CAGGACCTGCCGCATGCCTTCCAGAGACTGAGAAGCCCCAGGGAGGCCAAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GAGAGGCGCACAAGGGGAAAGCTCTCCTCGGCCACCCGCTCCCCAGGACGTACTCTTCCTGGACCAGCCTaGAAGGAGCCCACTGAACTC +
Preference number: 4 (lower is better)
Translates to: ERRTRGKLSSATRSPGRTLPGPA*KEPTEL
Trigger: GAGTTCAGTGGGCTCCTTGCAGGCTGGTCCAGGAAG...AGTACGTCCTGGGGAGCGGGTGGCCGAGGAGAGCTTTCCCCTTGTGCGCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCGGGTTCCCCCTTGTGTaGCTGGGGCCTCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: KGVLPGEEALWMGSLPNPGFPLV*LGPLSK
Trigger: CTTGGAGAGAGGCCCCAGCCACACAAGGGGGAACCC...GGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCTCCTCCTCACTGGGCTaGCCACCTCAGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVSSSLG*PPQAWP
Trigger: GGGCCAGGCCTGAGGTGGCCAGCCCAGTGAGGAGGA...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCTGCCTTCCTCCTCACTaGGCTGGCCACCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSCLPPH*AGHLRP
Trigger: AGGCCTGAGGTGGCCAGCCCAGTGAGGAGGAAGGCA...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp GGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCATCATGAACACGGGTaGGTCAGGGCCGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GGGSSLDGLTAKPLQLQSHHEHG*VRAGAG
Trigger: TCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATG...GGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCAAGGGGAGTCAGGGCCTaGGGAACAGGCCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: GSSLDGLTAKPLQLQSLPRGVRA*GTGLPT
Trigger: TGTGGGGAGGCCTGTTCCCCAGGCCCTGACTCCCCT...TGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCAGGGGTCCCTCAGTCTaGCCACGGCAAGACAGTCCC +
Preference number: 4 (lower is better)
Translates to: GGGSSLDGLTAKPLQLQSRGPSV*PRQDSP
Trigger: GGGACTGTCTTGCCGTGGCCAGACTGAGGGACCCCT...GGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp TCTGTGATGCTGGCAAGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCCCTCCAGGGATGCCCTaGGCAGCTACCGCTCACCCT +
Preference number: 4 (lower is better)
Translates to: SVMLARRHRHHEHGWVRAPPGMP*AATAHP
Trigger: AGGGTGAGCGGTAGCTGCCCAGGGCATCCCTGGAGG...GGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCTTGCCAGCATCACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp GGCCTGGGGAACAGGCCTCCCCACATCTGTGATGCTGGCAAGGAGGCACAGGCAAGAAGCAGGCGAAAGTaGACTGGGGCATGCCCTACG +
Preference number: 4 (lower is better)
Translates to: GLGNRPPHICDAGKEAQARSRRK*TGACPT
Trigger: CGTAGGGCATGCCCCAGTTCACTTTCGCCTGCTTCT...TGCCTGTGCCTCCTTGCCAGCATCACAGATGTGGGGAGGCCTGTTCCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR TCA 90 bp TGCCACTGCCATGGAGGTGGGGACATAAGGAGAGGACTAGAAGCTGGGCCAGAGCGGCAAGACAGTCCCTaGGGAGGGGAGTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: CHCHGGGDIRRGLEAGPERQDSP*GGESGP
Trigger: AGGCCCTGACTCCCCTCCTCAGGGACTGTCTTGCCG...CTCTGGCCCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCGGGGCTGGAGGAAACCTGCAAGGAGCCCACTaGACTCAGCAGCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: RRHRHHEHGWVRAGAGGNLQGAH*TQQPRD
Trigger: ATCTCTGGGCTGCTGAGTTCAGTGGGCTCCTTGCAG...GTTTCCTCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGCAACAGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGACGGCACAGTGGGCACTaGCCACTCCAGGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: SNSSPSPRRHMPHAVTLRRHSGH*PLQGWP
Trigger: AGGCCATCCCTGGAGTGGTCAGTGCCCACTGTGCCG...TCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCTGTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCCTCTCAGGGGTCTCTTaGCACTGCCATGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: KGVLPGEEALWMGSLPNPLSGVS*HCHGGG
Trigger: CCCACCTCCATGGCAGTGGCAAGAGACCCCTGAGAG...GGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GTAGGGAGGAAATGGGACTCATCGCCACCTGTTATGGAGGAGGCTGGGAGAGAGAGGCCTGGGACCTGCTaGGGGCTTGATGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VGRKWDSSPPVMEEAGRERPGTC*GLDGGA
Trigger: GGCCCCTCCATCAAGCCCCCAGCAGGTCCCAGGCCT...CTCTCTCCCAGCCTCCTCCATAACAGGTGGCGATGAGTCCCATTTCCTCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCGGGCTTCTCAGTCTCTaGAAGGCATGCGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSGLLSL*KACGRS
Trigger: GGACCTGCCGCATGCCTTCCAGAGACTGAGAAGCCC...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp AGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCGGGGCTGGAGGAAACACTCCTTGGCCTCCCTaGGGCTTCTCAGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RRHRHHEHGWVRAGAGGNTPWPP*GFSVSG
Trigger: TCCAGAGACTGAGAAGCCCCAGGGAGGCCAAGGAGT...GTTTCCTCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCCTCACACTTCCGCCCTaGAGGCCTTCTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSLTLPP*RPSPGS
Trigger: TGACCCTGGAGAAGGCCTCCAGGGCGGAAGTGTGAG...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp AGCAACAGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGGGGAGTCAGGGCCTaGGGAACAGGCCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: SNSSPSPRRHMPHAVTLRRGVRA*GTGLPT
Trigger: TGTGGGGAGGCCTGTTCCCCAGGCCCTGACTCCCCT...TCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCTGTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp CAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCAAGGGGCTGCCGGCTTaGAGGCAGAGGACAACTGGA +
Preference number: 4 (lower is better)
Translates to: QGSSPGGGSSLDGLTAKPKGLPA*RQRTTG
Trigger: TCCAGTTGTCCTCTGCCTCCAAGCCGGCAGCCCCTT...GGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCAACCTCAGCCCTaGGTGAAGAAGGGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVPQPQP*VKKGLP
Trigger: CGGCAGCCCCTTCTTCACCCAGGGCTGAGGTTGGGG...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GGCCTGGGGAACAGGCCTCCCCACATCTGTGATGCTGGCAAGGAGGCACAGGCAAGGAGTCCTGGGCCCTaGCTAGGGGAAGATTCTAGC +
Preference number: 4 (lower is better)
Translates to: GLGNRPPHICDAGKEAQARSPGP*LGEDSS
Trigger: GCTAGAATCTTCCCCTAGCCAGGGCCCAGGACTCCT...TGCCTGTGCCTCCTTGCCAGCATCACAGATGTGGGGAGGCCTGTTCCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCACTCCAGGGATGGCCTaGGGTCCAGAGGATTCACCC +
Preference number: 4 (lower is better)
Translates to: KGVLPGEEALWMGSLPNPTPGMA*GPEDSP
Trigger: GGGTGAATCCTCTGGACCCCAGGCCATCCCTGGAGT...GGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp CAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCGCTCACCCTCCTGGTaGATGGTTCTGACCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QGSSPGGGSSLDGLTAKPRSPSW*MVLTSW
Trigger: CCAGGAGGTCAGAACCATCCACCAGGAGGGTGAGCG...GGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp CAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCAGAAGCAGGCGAAAGTaGACTGGGGCATGCCCTACG +
Preference number: 4 (lower is better)
Translates to: QGSSPGGGSSLDGLTAKPRSRRK*TGACPT
Trigger: CGTAGGGCATGCCCCAGTTCACTTTCGCCTGCTTCT...GGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp TGCCACTGCCATGGAGGTGGGGACATAAGGAGAGGACTAGAAGCTGGGCCAGAGGAGGCACAGGCATCATaGACACGGGTGGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: CHCHGGGDIRRGLEAGPEEAQAS*TRVGQG
Trigger: GCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTC...CTCTGGCCCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCTTGCAGCCTCGCAGGTaGCCGCTAGGGAAACACATG +
Preference number: 4 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSLQPRR*PLGKHM
Trigger: CATGTGTTTCCCTAGCGGTCACCTGCGAGGCTGCAA...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCGCTCCTTGGCTGAGCTaGTCCCTGATGAGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: GGGSSLDGLTAKPLQLQSAPWLS*SLMREN
Trigger: GTTCTCCCTCATCAGGGAGCAGCTCAGCCAAGGAGC...GGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCAGGGCGCAGGGTCTaGGAATGCTGGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVPGRRV*ECWGCF
Trigger: AAAGCAGCCCCAGCATTCGCAGACCCTGCGCCCTGG...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCGGGGCTGGAGGAAACGCATCTATCTGCAGGTaGTTGTGGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RRHRHHEHGWVRAGAGGNASICR*LWWWWW
Trigger: CCACCACCACCACCACAACCACCTGCAGATAGATGC...GTTTCCTCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp CAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCGTCATGGCAGAACACTaGGGGGCTGTGGCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: QGSSPGGGSSLDGLTAKPVMAEH*GAVALH
Trigger: ATGGAGAGCCACAGCCCCCCAGTGTTCTGCCATGAC...GGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCAGGGCTTCTCAGTCTCTaGAAGGCATGCGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GSSLDGLTAKPLQLQSLPGLLSL*KACGRS
Trigger: GGACCTGCCGCATGCCTTCCAGAGACTGAGAAGCCC...TGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCATCATGAACACGGGTaGGTCAGGGCCGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVHHEHG*VRAGAG
Trigger: TCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATG...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp AGCAACAGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGGGGTCCCTCAGTCTaGCCACGGCAAGACAGTCCC +
Preference number: 4 (lower is better)
Translates to: SNSSPSPRRHMPHAVTLRRGPSV*PRQDSP
Trigger: GGGACTGTCTTGCCGTGGCCAGACTGAGGGACCCCT...TCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCTGTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp TCTGTGATGCTGGCAAGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCGGGCTATTCTGTCCCTaGGGAGCTAGAGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SVMLARRHRHHEHGWVRAGLFCP*GARGGL
Trigger: CAGACCCCCTCTAGCTCCCCAGGGACAGAATAGCCC...GGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCTTGCCAGCATCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCAGGGTCTGCGAATGCTaGGGCTGCTTTGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: KGVLPGEEALWMGSLPNPRVCEC*GCFGLS
Trigger: GGAAAGGCCAAAGCAGCCCCAGCATTCGCAGACCCT...GGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GGCCTGGGGAACAGGCCTCCCCACATCTGTGATGCTGGCAAGGAGGCACAGGCAGGGCAGAAACCAGCCTaGCCTCTCTGGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: GLGNRPPHICDAGKEAQAGQKPA*PLWNRE
Trigger: TTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCC...TGCCTGTGCCTCCTTGCCAGCATCACAGATGTGGGGAGGCCTGTTCCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCAACCTTTCCTCCTGGTaGGCCTGTGTGGTCAGGACA +
Preference number: 4 (lower is better)
Translates to: KGVLPGEEALWMGSLPNPNLSSW*ACVVRT
Trigger: TGTCCTGACCACACAGGCTCACCAGGAGGAAAGGTT...GGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCAACCCTATGCCCCACTaGGGCTCAACTTCCCAGACT +
Preference number: 4 (lower is better)
Translates to: KGVLPGEEALWMGSLPNPNPMPH*GSTSQT
Trigger: AGTCTGGGAAGTTGAGCCTCAGTGGGGCATAGGGTT...GGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCGGGGCTGGAGGAAACCTGGAAAAGGATTCTTaGCCCAGGTCCTGGAATCCC +
Preference number: 4 (lower is better)
Translates to: RRHRHHEHGWVRAGAGGNLEKDS*PRSWNP
Trigger: GGGATTCCAGGACCTGGGGCAAGAATCCTTTTCCAG...GTTTCCTCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR GCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCTTTGCCCTCCCTAGTTaGCCAGAGAGGCCCACATTC +
Preference number: 4 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSFALPS*PERPTF
Trigger: GAATGTGGGCCTCTCTGGGCAACTAGGGAGGGCAAA...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AGCAACAGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGATGCAGCTGCAATCCCTaGCAAGGCCTGAGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: SNSSPSPRRHMPHAVTLRCSCNP*QGLRGA
Trigger: TGCGCCTCTCAGGCCTTGGCAGGGATTGCAGCTGCA...TCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCTGTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp CAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCTGGCTCCCAGCTCAGTaGTCCTTGCATCCCACTCTA +
Preference number: 4 (lower is better)
Translates to: QGSSPGGGSSLDGLTAKPWLPAQ*SLHPTL
Trigger: TAGAGTGGGATGCAAGGAGCACTGAGCTGGGAGCCA...GGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp CTCCTTGGCCTCCCTGGGGCTTCTCAGTCTCTGGAAGGCATGCGGCAGGTCCTGATTTTGCAGAAGCCGTaGAGACCACAGAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: LLGLPGASQSLEGMRQVLILQKP*RPQKQA
Trigger: CGCCTGCTTCTGTGGTCTCCACGGCTTCTGCAAAAT...CAGGACCTGCCGCATGCCTTCCAGAGACTGAGAAGCCCCAGGGAGGCCAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp TCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTCCTAGCCCAAGGCGGGCATGCGGCAGGTCCTaGGGTTCCCCCTTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SARAASFPFSNSSPSPRRACGRS*GSPLCG
Trigger: GCCACACAAGGGGGAACCCCAGGACCTGCCGCATGC...CCGCCTTGGGCTAGGAGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp CCCTTGTGTGGCTGGGGCCTCTCTCCAAGGAGGTCTGAGAATTGGAAGCTAATGGAGCCACGGAGCCACTaGCCACCTCTGCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLCGWGLSPRRSENWKLMEPRSH*PPLPSS
Trigger: GGAGGAAGGCAGAGGTGGCCAGTGGCTCCGTGGCTC...CATTAGCTTCCAATTCTCAGACCTCCTTGGAGAGAGGCCCCAGCCACACAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCGGCCTAGACAGGACCTaGAGTCAGAGTCTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSGLDRT*SQSLGQ
Trigger: TTGGCCTAGACTCTGACTCCAGGTCCTGTCTAGGCC...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCCTTGAACTCCAGACCTaGGGGGTGGTTTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSLELQT*GVVSVS
Trigger: GCTGACAGAAACCACCCCCCAGGTCTGGAGTTCAAG...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 72 bp CTCCCAGGTTTTGGGCGAACCAGCCGAGGAAGACTTTaGCCCTCCCTAGTTGCCCAGAGAGGCCCACATTCC +
Preference number: 4 (lower is better)
Translates to: LPGFGRTSRGRL*PSLVAQRGPHS
Trigger: GGAATGTGGGCCTCTCTGGGCAACTAGGGAGGGCAAAAGTCTTCCTCGGCTGGTTCGCCCAAAACCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp ACAAGAAGCCCCTTGGGTCCTGTGGGCCAGGGTCCTAGGCAACACTCAAGTCACGGACAAACTCCAGCCTaGGGCACTTCCCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: TRSPLGPVGQGPRQHSSHGQTPA*GTSPCR
Trigger: TCTGCAAGGGGAAGTGCCTCAGGCTGGAGTTTGTCC...GTGACTTGAGTGTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGCTTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp GTGAGCCTGTGTGGTCAGGACATAACACCCAATATCTCTGAGTCTCCGGGGATAGAGGGGCCCTGGTTCTaGTCACACCGCCGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: VSLCGQDITPNISESPGIEGPWF*SHRRLP
Trigger: CGGGAGACGGCGGTGTGATCAGAACCAGGGCCCCTC...TATCCCCGGAGACTCAGAGATATTGGGTGTTATGTCCTGACCACACAGGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACAGAGGGGCCCTGGTTCTaGTCACACCGCCGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTEGPWF*SHRRLP
Trigger: CGGGAGACGGCGGTGTGATCAGAACCAGGGCCCCTC...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR TCA 90 bp TATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTCAGAAGGGAGGCACACAGGAGGCTaGTGCCCTCGGGTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: YLGALPSLPRSPVYLSEGRHTGG*CPRVRV
Trigger: GACTCTCACCCGAGGGCATCAGCCTCCTGTGTGCCT...CCCTTCTGACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCGAGCTAGAGGGGGTCTaGCTTTGCTCCTTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVELEGV*LCSLAE
Trigger: CTCAGCCAAGGAGCAAAGTCAGACCCCCTCTAGCTC...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp TCTGTGATGCTGGCAAGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCTCCTGGGCTCCTCCGTaGAGAGTCAAGGTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SVMLARRHRHHEHGWVRASWAPP*RVKVPV
Trigger: AACAGGAACCTTGACTCTTCACGGAGGAGCCCAGGA...GGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCTTGCCAGCATCACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCAACACGGGAATGAGCTaGAGGAGGAGAGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVNTGMS*RRRDGC
Trigger: GCAGCCGTCTCTCCTCCTTCAGCTCATTCCCGTGTT...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCCTGGAAAAGGATTCTTaGCCCAGGTCCTGGAATCCC +
Preference number: 4 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSLEKDS*PRSWNP
Trigger: GGGATTCCAGGACCTGGGGCAAGAATCCTTTTCCAG...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR GCA 90 bp GGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCTGCCTGAAGCATCTCTaGTGCTGGCATTCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GGGSSLDGLTAKPLQLQSCLKHL*CWHSSL
Trigger: CAGAGACGAATGCCAGCAGCAGAGATGCTTCAGGCA...GGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp TATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTCAGAAGGGGACTTCCTCCAGGGATaGCCTGGGCAGCTACCGCTC +
Preference number: 4 (lower is better)
Translates to: YLGALPSLPRSPVYLSEGDFLQG*PGQLPL
Trigger: GAGCGGTAGCTGCCCAGGGCATCCCTGGAGGAAGTC...CCCTTCTGACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp CTCCTTGGCCTCCCTGGGGCTTCTCAGTCTCTGGAAGGCATGCGGCAGGTCCTGAGGAGGTCTGAGAATTaGAAGCTAATGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLGLPGASQSLEGMRQVLRRSEN*KLMGVG
Trigger: GCCCACACCCATTAGCTTCCAATTCTCAGACCTCCT...CAGGACCTGCCGCATGCCTTCCAGAGACTGAGAAGCCCCAGGGAGGCCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp GACTCTCCTATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTTCCCCCTTGTGTGGCTaGGGCCTCTCTCCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: DSPILGPCPLYPGHLFTCSPLCG*GLSPRR
Trigger: CCTCCTTGGAGAGAGGCCCCAGCCACACAAGGGGGA...ACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp TTCTCCAGGGTCAGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATGGGTTCCCCCTTGTGTaGCTGGGGCCTCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FSRVRAAGSSLLEQPVSHGFPLV*LGPLSK
Trigger: CTTGGAGAGAGGCCCCAGCCACACAAGGGGGAACCC...ATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp TCTGTGATGCTGGCAAGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCCAGGGTCAGGGCTGCTaGAAGTTCTCTGCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: SVMLARRHRHHEHGWVRAQGQGC*KFSARA
Trigger: TGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTG...GGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCTTGCCAGCATCACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp GGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCATCTTGCCCCAGGTCCTaGAATCCCAGGAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GSSLDGLTAKPLQLQSLPSCPRS*NPRRVS
Trigger: TGAGACTCTCCTGGGATTCCAGGACCTGGGGCAAGA...TGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp CCCTTGTGTGGCTGGGGCCTCTCTCCAAGGAGGTCTGAGAATTGGAAGCTAATGGGCCCAGGAGGATGCTaGCAGGGGGCTGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PLCGWGLSPRRSENWKLMGPGGC*QGAGKG
Trigger: TCCTTTTCCAGCCCCCTGCCAGCATCCTCCTGGGCC...CATTAGCTTCCAATTCTCAGACCTCCTTGGAGAGAGGCCCCAGCCACACAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTAGGCCTGGCCCCACCTaGCCCAGGAGGATGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GCWKFSARAASFPFSNSSRPGPT*PRRMLA
Trigger: TGCCAGCATCCTCCTGGGCCAGGTGGGGCCAGGCCT...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACATCCTCCTCACTGGGCTaGCCACCTCAGGCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTSSSLG*PPQAWP
Trigger: GGGCCAGGCCTGAGGTGGCCAGCCCAGTGAGGAGGA...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp CAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCCTGGTGAGCCTGTGTaGTCAGGACATAACACCCAA +
Preference number: 4 (lower is better)
Translates to: QGSSPGGGSSLDGLTAKPPGEPV*SGHNTQ
Trigger: TTGGGTGTTATGTCCTGACCACACAGGCTCACCAGG...GGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GTAGGGAGGAAATGGGACTCATCGCCACCTGTTATGGAGGAGGCTGGGAGAGAGGCCCCCACCTCAAGGTaGAGTCTCTGGGAGAGAACC +
Preference number: 4 (lower is better)
Translates to: VGRKWDSSPPVMEEAGREAPTSR*SLWERT
Trigger: GGTTCTCTCCCAGAGACTCCACCTTGAGGTGGGGGC...CTCTCTCCCAGCCTCCTCCATAACAGGTGGCGATGAGTCCCATTTCCTCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCTCCTCGCTTTACAGATaGGGAAAACTGGCCCCCTCA +
Preference number: 4 (lower is better)
Translates to: GGGSSLDGLTAKPLQLQSSSLYR*GKLAPS
Trigger: TGAGGGGGCCAGTTTTCCCCATCTGTAAAGCGAGGA...GGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp TTCTCCAGGGTCAGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATCAACTCCCAATCCGGTaGATCCGCCTAGCGCCTTCG +
Preference number: 4 (lower is better)
Translates to: FSRVRAAGSSLLEQPVSHQLPIR*IRLAPS
Trigger: CGAAGGCGCTAGGCGGATTCACCGGATTGGGAGTTG...ATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCTTCCATTCAGCAGCCTaGAGCCCAAGAGGGAAAATG +
Preference number: 4 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSFHSAA*SPRGKM
Trigger: CATTTTCCCTCTTGGGCTTCAGGCTGCTGAATGGAA...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCAGCAGAAGCTCTGGGTaGCTTGCCTTTCCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVSRSSG*LAFPSH
Trigger: GTGAGAGGGAAAGGCAAGTCACCCAGAGCTTCTGCT...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp CAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCGAAATGTGGCCATCTTaGGTAGGGGTGAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: QGSSPGGGSSLDGLTAKPEMWPS*VGVRRN
Trigger: ATTCCTCCTCACCCCTACTCAAGATGGCCACATTTC...GGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AGCAACAGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGACGACCCGCACACATATaGAGGCATTTGCACACACGC +
Preference number: 4 (lower is better)
Translates to: SNSSPSPRRHMPHAVTLRRPAHI*RHLHTR
Trigger: GCGTGTGTGCAAATGCCTGCATATGTGTGCGGGTCG...TCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCTGTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCTGCCAGCATAGAATGTaGCCTTGCTTCTCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: GGGSSLDGLTAKPLQLQSCQHRM*PCFSQV
Trigger: AACCTGGGAGAAGCAAGGGCACATTCTATGCTGGCA...GGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GACTCTCCTATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTCCAAACCCCTGCAGCTaGAATCCCTGCCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DSPILGPCPLYPGHLFTCPNPCS*NPCQGL
Trigger: CAGGCCTTGGCAGGGATTGCAGCTGCAGGGGTTTGG...ACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp TGCCACTGCCATGGAGGTGGGGACATAAGGAGAGGACTAGAAGCTGGGCCAGAGTCAGACAATTCCAGCTaGAGTGCTGGCCCCAACCTC +
Preference number: 4 (lower is better)
Translates to: CHCHGGGDIRRGLEAGPESDNSS*SAGPNL
Trigger: GAGGTTGGGGCCAGCACTGCAGCTGGAATTGTCTGA...CTCTGGCCCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GTGAGCCTGTGTGGTCAGGACATAACACCCAATATCTCTGAGTCTCCGGGGATAGCATGCGGCAGGTCCTaGGGTTCCCCCTTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: VSLCGQDITPNISESPGIACGRS*GSPLCG
Trigger: GCCACACAAGGGGGAACCCCAGGACCTGCCGCATGC...TATCCCCGGAGACTCAGAGATATTGGGTGTTATGTCCTGACCACACAGGCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp TATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTCAGAAGGGCTCACACTTCCGCCCTaGAGGCCTTCTCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: YLGALPSLPRSPVYLSEGLTLPP*RPSPGS
Trigger: TGACCCTGGAGAAGGCCTCCAGGGCGGAAGTGTGAG...CCCTTCTGACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCGAGCCACGGAGCCACTaGCCACCTCTGCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGEPRSH*PPLPSS
Trigger: GGAGGAAGGCAGAGGTGGCCAGTGGCTCCGTGGCTC...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACAGCCCCTTGGGTCCTGTaGGCCAGGGTCCTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTAPWVL*ARVLGN
Trigger: GTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGC...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GTAGGGAGGAAATGGGACTCATCGCCACCTGTTATGGAGGAGGCTGGGAGAGAGTACCGCTCACCCTCCTaGTGGATGGTTCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: VGRKWDSSPPVMEEAGREYRSPS*WMVLTS
Trigger: GGAGGTCAGAACCATCCACCAGGAGGGTGAGCGGTA...CTCTCTCCCAGCCTCCTCCATAACAGGTGGCGATGAGTCCCATTTCCTCCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCGGGGCTGGAGGAAACTCTTCTAGAATCACTTaGGCATCTATCTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RRHRHHEHGWVRAGAGGNSSRIT*ASICRW
Trigger: CCACCTGCAGATAGATGCTCAAGTGATTCTAGAAGA...GTTTCCTCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACAGGTAAGGGCAGAGGCTaGAGCTGGAAGGTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTGKGRG*SWKVGG
Trigger: CCCGCCAACCTTCCAGCTTCAGCCTCTGCCCTTACC...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR TCA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACACCTGGTGGATGGTTCTaGCCTCCTGGGCTCCTCCGT +
Preference number: 4 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTPGGWF*PPGLLR
Trigger: ACGGAGGAGCCCAGGAGGTCAGAACCATCCACCAGG...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCACAGGCTTACAGAATCTaGCTGAAGCATCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSSLDGLTAKPLQLQSLPQAYRI*LKHLCC
Trigger: GCAGCAGAGATGCTTCAGGCAGATTCTGTAAGCCTG...TGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCACATAGAATGTGCCCTTaGTTCTCCCAGGTTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GSSLDGLTAKPLQLQSLPHRMCP*FSQVLG
Trigger: GCCCAAAACCTGGGAGAAGCAAGGGCACATTCTATG...TGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCAACCCATATGCTACATaGAAAAAGCCCTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GGGSSLDGLTAKPLQLQSNPYAT*KKPFPG
Trigger: CCCAGGGAAGGGCTTTTTGCATGTAGCATATGGGTT...GGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCGGGGCTGGAGGAAACGCTCTCTCTTGCTCTTaGTTTTGGGTCAGAGAGATA +
Preference number: 4 (lower is better)
Translates to: RRHRHHEHGWVRAGAGGNALSCS*FWVREI
Trigger: TATCTCTCTGACCCAAAAGCAAGAGCAAGAGAGAGC...GTTTCCTCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCAAGGCAAGGAATGAGGTaGGGTGGTTTGATCAGCATG +
Preference number: 4 (lower is better)
Translates to: GSSLDGLTAKPLQLQSLPRQGMR*GGLISM
Trigger: CATGCTGATCAAACCACCCCACCTCATTCCTTGCCT...TGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GTGAGCCTGTGTGGTCAGGACATAACACCCAATATCTCTGAGTCTCCGGGGATAGGCCCAGGAGGATGCTaGCAGGGGGCTGGAAAAGGA +
Preference number: 4 (lower is better)
Translates to: VSLCGQDITPNISESPGIGPGGC*QGAGKG
Trigger: TCCTTTTCCAGCCCCCTGCCAGCATCCTCCTGGGCC...TATCCCCGGAGACTCAGAGATATTGGGTGTTATGTCCTGACCACACAGGCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp ACAAGAAGCCCCTTGGGTCCTGTGGGCCAGGGTCCTAGGCAACACTCAAGTCACAAGCATCTCTGCTGCTaGCATTCGTCTCTGCCTGTC +
Preference number: 4 (lower is better)
Translates to: TRSPLGPVGQGPRQHSSHKHLCC*HSSLPV
Trigger: GACAGGCAGAGACGAATGCCAGCAGCAGAGATGCTT...GTGACTTGAGTGTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGCTTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp ACAAGAAGCCCCTTGGGTCCTGTGGGCCAGGGTCCTAGGCAACACTCAAGTCACCTCCAGGAGGCTCTCTaGCCTCTGTATCAAGGTAAC +
Preference number: 4 (lower is better)
Translates to: TRSPLGPVGQGPRQHSSHLQEAL*PLYQGN
Trigger: GTTACCTTGATACAGAGGCCAGAGAGCCTCCTGGAG...GTGACTTGAGTGTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGCTTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GTAGGGAGGAAATGGGACTCATCGCCACCTGTTATGGAGGAGGCTGGGAGAGAGAAACCTGCGACCCTCTaGTTCCACAACCCTATGCCC +
Preference number: 4 (lower is better)
Translates to: VGRKWDSSPPVMEEAGREKPATL*FHNPMP
Trigger: GGGCATAGGGTTGTGGAACCAGAGGGTCGCAGGTTT...CTCTCTCCCAGCCTCCTCCATAACAGGTGGCGATGAGTCCCATTTCCTCCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp TTCTCCAGGGTCAGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATGAACACCAGACTTCCTaGACCAGCCTGCAAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FSRVRAAGSSLLEQPVSHEHQTS*TSLQGA
Trigger: GGCTCCTTGCAGGCTGGTCCAGGAAGTCTGGTGTTC...ATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp CCTCATAAAGACAACCTGAATCCCACCCAATCTGCCCAAAGCCCAGGAAAGGCCATAACCCCGGCACAGTaGGCACTGACCACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PHKDNLNPTQSAQSPGKAITPAQ*ALTTPG
Trigger: CCCTGGAGTGGTCAGTGCCCACTGTGCCGGGGTTAT...GGCCTTTCCTGGGCTTTGGGCAGATTGGGTGGGATTCAGGTTGTCTTTATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCAGGTCTGGGAGCTCTTaGCTTTGGCAATTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSRSGSS*LWQFLP
Trigger: AGGAAGAAATTGCCAAAGCCAAGAGCTCCCAGACCT...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp ACAAGAAGCCCCTTGGGTCCTGTGGGCCAGGGTCCTAGGCAACACTCAAGTCACCTCTCCAAGGAGGTCTaGGAATTGGAAGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: TRSPLGPVGQGPRQHSSHLSKEV*ELEANG
Trigger: CCCATTAGCTTCCAATTCTCAGACCTCCTTGGAGAG...GTGACTTGAGTGTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGCTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACAGCCTCCCCACATCTGTaGTGCTGGCAAGGAGGCACA +
Preference number: 4 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTASPHL*CWQGGT
Trigger: TGTGCCTCCTTGCCAGCATCACAGATGTGGGGAGGC...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR TCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCGCCTCCCCACATCTGTaGTGCTGGCAAGGAGGCACA +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGASPHL*CWQGGT
Trigger: TGTGCCTCCTTGCCAGCATCACAGATGTGGGGAGGC...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR TCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTAGGAAAGGGGAGCCCTaGCTCTCCTATCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GCWKFSARAASFPFSNSSRKGEP*LSYLGA
Trigger: GGCCCCAAGATAGGAGAGTCAGGGCTCCCCTTTCCT...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp GACTCTCCTATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTCCACTCAGAACACTTTaGCCTTGGGACCCCACCCAT +
Preference number: 4 (lower is better)
Translates to: DSPILGPCPLYPGHLFTCPLRTL*PWDPTH
Trigger: ATGGGTGGGGTCCCAAGGTCAAAGTGTTCTGAGTGG...ACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp GGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCAAAAAAGGTTTCAACCTaGGACAAGAAGCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: GSSLDGLTAKPLQLQSLPKKVST*DKKPLG
Trigger: CCCAAGGGGCTTCTTGTCTCAGGTTGAAACCTTTTT...TGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTGTTTCTGTCAGCTCCTaGGCTGCCCAGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GCWKFSARAASFPFSNSSVSVSS*AAQVWE
Trigger: CTCCCAGACCTGGGCAGCTCAGGAGCTGACAGAAAC...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp TTCTCCAGGGTCAGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATGATGGAACACGGGAATaGGCTGAAGGAGGAGAGACG +
Preference number: 4 (lower is better)
Translates to: FSRVRAAGSSLLEQPVSHDGTRE*AEGGET
Trigger: CGTCTCTCCTCCTTCAGCTCATTCCCGTGTTCCATC...ATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCAGGCTGGGAGAGTCCTaGGGATCTGTCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGRLGES*GSVWVL
Trigger: CAGGACCCAGACAGATCCTCAGGACTCTCCCAGCCT...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AGCAACAGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGACCTTGTCCGATTCTCTaGTGTAGCTTCCAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SNSSPSPRRHMPHAVTLRPCPIL*CSFQWR
Trigger: TCTCCACTGGAAGCTACAGCAGAGAATCGGACAAGG...TCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCTGTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629624.2
CDS-3UTR GCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCCCTTGTCCGATTCTCTaGTGTAGCTGCCCGCACGCC +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGPCPIL*CSCPHA
Trigger: GGCGTGCGGGCAGCTACAGCAGAGAATCGGACAAGG...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTAGTCTCTGGAAGGCATaGGGCAGGTCCTGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: GCWKFSARAASFPFSNSSSLWKA*GRSWGS
Trigger: GGAACCCCAGGACCTGCCGCATGCCTTCCAGAGACT...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR GCA 90 bp TTCTCCAGGGTCAGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATGCGGCACATGCCTCATaGGGTTACCCTGAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: FSRVRAAGSSLLEQPVSHAAHAS*GYPEKS
Trigger: ACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGC...ATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR GCA 90 bp GATGAGGGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTTGCGCAGGGTCTGCGAATaGTGGGGCTGCTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: DEGRNQPGLSGTEKVRALRRVCE*WGCFGL
Trigger: AAGGCCAAAGCAGCCCCAGCATTCGCAGACCCTGCG...CAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp CCTCATAAAGACAACCTGAATCCCACCCAATCTGCCCAAAGCCCAGGAAAGGCCGCCCCCTCACCCATCTaGAAGGAGGAATCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PHKDNLNPTQSAQSPGKAAPSPI*KEESVP
Trigger: TGGCACTGATTCCTCCTTGCAGATGGGTGAGGGGGC...GGCCTTTCCTGGGCTTTGGGCAGATTGGGTGGGATTCAGGTTGTCTTTATGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCGATCTGTCTGGGTCCTaGCATCTCCCCCTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGDLSGS*HLPLLP
Trigger: AGGCAGGAGGGGGAGATGGCAGGACCCAGACAGATC...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTTGCCCTACGCCAGGCTaGGGGAACACTCACCAGAGA +
Preference number: 4 (lower is better)
Translates to: GCWKFSARAASFPFSNSSCPTPG*GNTHQR
Trigger: TCTCTGGTGAGTGTTCCCCCAGCCTGGCGTAGGGCA...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCCAGGCGAAAGTGAACTaGGGCATGCCCTACGCCAGG +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGQAKVN*GMPYAR
Trigger: CCTGGCGTAGGGCATGCCCCAGTTCACTTTCGCCTG...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp ACCAGCACATCTCCAGCCACTGGGCAAAATGCATATTCAGTCTGTAGACAGGACTGCCTTCCTCCTCACTaGGCTGGCCACCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TSTSPATGQNAYSVCRQDCLPPH*AGHLRP
Trigger: AGGCCTGAGGTGGCCAGCCCAGTGAGGAGGAAGGCA...GTCCTGTCTACAGACTGAATATGCATTTTGCCCAGTGGCTGGAGATGTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCACGCAGTCCCCTCTATaGCTTCTGAGGAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVTQSPL*LLRREE
Trigger: TTCTTCTCTCCTCAGAAGCCATAGAGGGGACTGCGT...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp TTCTCCAGGGTCAGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATCTGACTCTCCTATCTTaGGGCCTTGCCCTCTCTACC +
Preference number: 4 (lower is better)
Translates to: FSRVRAAGSSLLEQPVSHLTLLS*GLALST
Trigger: GGTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTCAG...ATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCGGGTTGGGGTGTGCCTaGCTAGAAGCTGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGGLGCA*LEAATS
Trigger: GGAGGTAGCAGCTTCTAGCCAGGCACACCCCAACCC...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp TATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTCAGAAGGGAGGGACAATAGAATGTaGGGTTGGGGTGTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: YLGALPSLPRSPVYLSEGRDNRM*GWGVPG
Trigger: GCCAGGCACACCCCAACCCCACATTCTATTGTCCCT...CCCTTCTGACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp TGCCACTGCCATGGAGGTGGGGACATAAGGAGAGGACTAGAAGCTGGGCCAGAGTGTTATGGAGGAGGCTaGGAGAGAGGAGGCAATTTG +
Preference number: 4 (lower is better)
Translates to: CHCHGGGDIRRGLEAGPECYGGG*ERGGNL
Trigger: CAAATTGCCTCCTCTCTCCCAGCCTCCTCCATAACA...CTCTGGCCCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCTCCCAAGAAGGGAAGTaGCTGCAGTGTCATACCTGT +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVSQEGK*LQCHTC
Trigger: ACAGGTATGACACTGCAGCCACTTCCCTTCTTGGGA...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 72 bp ACATTCCAAGGAAAGGGGAGCCCTGACTCTCCTATCTaGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTT +
Preference number: 4 (lower is better)
Translates to: TFQGKGSPDSPI*GPCPLYPGHLF
Trigger: AAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTCAGGGCTCCCCTTTCCTTGGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACACTCATGCGGTTACCCTaGGAAGAGTCCCCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTLMRLP*EESPEA
Trigger: AGCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAG...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR TCA 90 bp CCCTTGTGTGGCTGGGGCCTCTCTCCAAGGAGGTCTGAGAATTGGAAGCTAATGGTGGTACTGTCAGCTTaGTCACCTGCTGGACATAGC +
Preference number: 4 (lower is better)
Translates to: PLCGWGLSPRRSENWKLMVVLSA*SPAGHS
Trigger: GCTATGTCCAGCAGGTGATCAAGCTGACAGTACCAC...CATTAGCTTCCAATTCTCAGACCTCCTTGGAGAGAGGCCCCAGCCACACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp TATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTCAGAAGGGTGCTGTGTTAAAGGATaGGGGCAGAAACCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YLGALPSLPRSPVYLSEGCCVKG*GQKPAW
Trigger: CCAGGCTGGTTTCTGCCCTCATCCTTTAACACAGCA...CCCTTCTGACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp TTCTCCAGGGTCAGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATGTGGTCTTGAGGACGTaGAATGTATCCGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: FSRVRAAGSSLLEQPVSHVVLRT*NVSAQH
Trigger: GTGTTGGGCGGATACATTTCACGTCCTCAAGACCAC...ATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp GACTCTCCTATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTCCAGGGTTGTGGTCTTaGGGACGTGAAATGTATCCG +
Preference number: 4 (lower is better)
Translates to: DSPILGPCPLYPGHLFTCPGLWS*GREMYP
Trigger: CGGATACATTTCACGTCCTCAAGACCACAACCCTGG...ACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCCTATCTTGGGGCCTTaGCCTCTCTACCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: RAAGSSLLEQPVSHLATAPILGP*PLYPGH
Trigger: GTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATAGG...AGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp CCAACACAGCCACCCAGGTGCTGGGTTCAAATCTCGATAAACTACATAGGGGTACAATTCCAGCTGCAGTaGTGGCCCCAACCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PTQPPRCWVQISINYIGVQFQLQ*WPQPQP
Trigger: GGGCTGAGGTTGGGGCCAGCACTGCAGCTGGAATTG...TACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp CCCTTGTGTGGCTGGGGCCTCTCTCCAAGGAGGTCTGAGAATTGGAAGCTAATGGAAGCTGCTACCTCCTaGTCAGACAATTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLCGWGLSPRRSENWKLMEAATS*SDNSSC
Trigger: GCAGCTGGAATTGTCTGAGCAGGAGGTAGCAGCTTC...CATTAGCTTCCAATTCTCAGACCTCCTTGGAGAGAGGCCCCAGCCACACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GTAGGGAGGAAATGGGACTCATCGCCACCTGTTATGGAGGAGGCTGGGAGAGAGGCAAGGAGGAATCAGTaGCACGCAGCAAGAACAAGA +
Preference number: 4 (lower is better)
Translates to: VGRKWDSSPPVMEEAGREARRNQ*HAARTR
Trigger: TCTTGTTCTTGCTGCGTGGCACTGATTCCTCCTTGC...CTCTCTCCCAGCCTCCTCCATAACAGGTGGCGATGAGTCCCATTTCCTCCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCGTGACAGCTCTCTCTTaGTCTTGCTTTTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVVTALS*SCFWVR
Trigger: TCTGACCCAAAAGCAAGAGCAAGAGAGAGCTGTCAC...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp CCCTTGTGTGGCTGGGGCCTCTCTCCAAGGAGGTCTGAGAATTGGAAGCTAATGCAGCGTTTGCCGGCATaGTTTTCAGTGGCAACCAGA +
Preference number: 4 (lower is better)
Translates to: PLCGWGLSPRRSENWKLMQRLPA*FSVATR
Trigger: TCTGGTTGCCACTGAAAAGCATGCCGGCAAACGCTG...CATTAGCTTCCAATTCTCAGACCTCCTTGGAGAGAGGCCCCAGCCACACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp CCCTTGTGTGGCTGGGGCCTCTCTCCAAGGAGGTCTGAGAATTGGAAGCTAATGATTTTGCAGAAGCCGTaGAGACCACAGAAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: PLCGWGLSPRRSENWKLMILQKP*RPQKQA
Trigger: CGCCTGCTTCTGTGGTCTCCACGGCTTCTGCAAAAT...CATTAGCTTCCAATTCTCAGACCTCCTTGGAGAGAGGCCCCAGCCACACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTACTCCTTGGCCTCCCTaGGGCTTCTCAGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GCWKFSARAASFPFSNSSTPWPP*GFSVSG
Trigger: TCCAGAGACTGAGAAGCCCCAGGGAGGCCAAGGAGT...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp GTAGGGAGGAAATGGGACTCATCGCCACCTGTTATGGAGGAGGCTGGGAGAGAGACGCAGTCCCCTCTATaGCTTCTGAGGAGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: VGRKWDSSPPVMEEAGRETQSPL*LLRREE
Trigger: TTCTTCTCTCCTCAGAAGCCATAGAGGGGACTGCGT...CTCTCTCCCAGCCTCCTCCATAACAGGTGGCGATGAGTCCCATTTCCTCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCCCTACCTCCTGGAAATaGGCTGGGGGTAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGPTSWK*AGGKGR
Trigger: TCTGCCCTTACCCCCAGCCCATTTCCAGGAGGTAGG...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp CAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCGTTTCTTGGTTCTTGTaGTACTGTCAGCTTGATCAC +
Preference number: 4 (lower is better)
Translates to: QGSSPGGGSSLDGLTAKPVSWFL*YCQLDH
Trigger: GTGATCAAGCTGACAGTACCACAAGAACCAAGAAAC...GGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp TGCCACTGCCATGGAGGTGGGGACATAAGGAGAGGACTAGAAGCTGGGCCAGAGTCAGCAATATGGACTTaGGGGGCTGTGTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: CHCHGGGDIRRGLEAGPESAIWT*GAVFVL
Trigger: CAACACAAACACAGCCCCCCAAGTCCATATTGCTGA...CTCTGGCCCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GACTCTCCTATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTTTAAACAGTTCCCCCTaGCTGAGGGGTGACCTTAGG +
Preference number: 4 (lower is better)
Translates to: DSPILGPCPLYPGHLFTCLNSSP*LRGDLR
Trigger: CCTAAGGTCACCCCTCAGCCAGGGGGAACTGTTTAA...ACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 72 bp ACCTGTTATGGAGGAGGCTGGGAGAGAGGAGGCAATTaGCCAAGGTCAGGAGTCAGTCATGGCAGAACACTG +
Preference number: 4 (lower is better)
Translates to: TCYGGGWERGGN*PRSGVSHGRTL
Trigger: CAGTGTTCTGCCATGACTGACTCCTGACCTTGGCAAATTGCCTCCTCTCTCCCAGCCTCCTCCATAACAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAAAGGCACACAGGAGGCTaGTGCCCTCGGGTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQRHTGG*CPRVRV
Trigger: GACTCTCACCCGAGGGCATCAGCCTCCTGTGTGCCT...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR TCA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAAGGTAAGGGCAGAGGCTaGAGCTGGAAGGTTGGCGGG +
Preference number: 4 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQGKGRG*SWKVGG
Trigger: CCCGCCAACCTTCCAGCTTCAGCCTCTGCCCTTACC...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR TCA 90 bp TCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTCCTAGCCCAAGGCGGCTCATAAAGACAACCTaGATCCCACCCAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: SARAASFPFSNSSPSPRRLIKTT*IPPNLP
Trigger: GGGCAGATTGGGTGGGATTCAGGTTGTCTTTATGAG...CCGCCTTGGGCTAGGAGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACAATGCGTGCCTTCCTGTaGGGTAGGGAGGAAATGGGA +
Preference number: 4 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTMRAFL*GREEMG
Trigger: TCCCATTTCCTCCCTACCTCACAGGAAGGCACGCAT...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCGGAAACCATGCAACTTaGGCCAAAATGAAACCAATT +
Preference number: 4 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSGNHAT*AKMKPI
Trigger: AATTGGTTTCATTTTGGCTCAAGTTGCATGGTTTCC...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTGCGGCACATGCCTCATaGGGTTACCCTGAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RAAGSSLLEQPVSHLATAAAHAS*GYPEKS
Trigger: ACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGC...AGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR GCA 90 bp AGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTCCAGGGTCAGGGCTaGTGGAAGTTCTCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: RAAGSSLLEQPVSHLATALQGQG*WKFSAR
Trigger: TCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAG...AGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR GCA 90 bp GATGAGGGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTTGGAATCCCACCCAATCTaGCCAAAGCCCAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: DEGRNQPGLSGTEKVRALESHPI*PKPRKG
Trigger: GCCTTTCCTGGGCTTTGGGCAGATTGGGTGGGATTC...CAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GATGAGGGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTTGAGGGCAGAGGAAACCTaGGACCCTCTGGTTCCACAA +
Preference number: 4 (lower is better)
Translates to: DEGRNQPGLSGTEKVRALRAEET*DPLVPQ
Trigger: TTGTGGAACCAGAGGGTCGCAGGTTTCCTCTGCCCT...CAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCGTGAAAGCCCACCTTTaGAGTTGTGAACCAAGTATC +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVVKAHL*SCEPSI
Trigger: GATACTTGGTTCACAACTGCAAAGGTGGGCTTTCAC...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GATGAGGGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTTGCAGGGTCAGGGCTGCTaGAAGTTCTCTGCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: DEGRNQPGLSGTEKVRALQGQGC*KFSARA
Trigger: TGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTG...CAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCGCCCAAGAGGGAAAATaGCCATGGGAAGTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGAQEGK*PWEVLA
Trigger: AGCGAGGACTTCCCATGGCCATTTTCCCTCTTGGGC...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCGGGGCTGGAGGAAACATAGTTCCTATCCCATaGAAATTTAGAGAAGCGAAC +
Preference number: 4 (lower is better)
Translates to: RRHRHHEHGWVRAGAGGNIVPIP*KFREAN
Trigger: GTTCGCTTCTCTAAATTTCCATGGGATAGGAACTAT...GTTTCCTCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTGAGAGGACTAGAAGCTaGGCCAGAGGGAACAGACAG +
Preference number: 4 (lower is better)
Translates to: GCWKFSARAASFPFSNSSERTRS*ARGNRQ
Trigger: CTGTCTGTTCCCTCTGGCCCAGCTTCTAGTCCTCTC...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GTGAGCCTGTGTGGTCAGGACATAACACCCAATATCTCTGAGTCTCCGGGGATACTCTTGCCACTGCCATaGAGGTGGGGACATAAGGAG +
Preference number: 4 (lower is better)
Translates to: VSLCGQDITPNISESPGILLPLP*RWGHKE
Trigger: CTCCTTATGTCCCCACCTCCATGGCAGTGGCAAGAG...TATCCCCGGAGACTCAGAGATATTGGGTGTTATGTCCTGACCACACAGGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 72 bp CTGATAAAAAGGTTTCAACCTGAGACAAGAAGCCCCTaGGGTCCTGTGGGCCAGGGTCCTAGGCAACACTCA +
Preference number: 4 (lower is better)
Translates to: LIKRFQPETRSP*GPVGQGPRQHS
Trigger: TGAGTGTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGCTTCTTGTCTCAGGTTGAAACCTTTTTATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 72 bp ACCATACCACTTCCATCCACCCTCCAGATATGTCTGTaGTCTGCACGGAGTGCATCTGTGAGGGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: TIPLPSTLQICL*SARSASVRAEE
Trigger: TTCCTCTGCCCTCACAGATGCACTCCGTGCAGACAACAGACATATCTGGAGGGTGGATGGAAGTGGTATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp GTAGGGAGGAAATGGGACTCATCGCCACCTGTTATGGAGGAGGCTGGGAGAGAGATCTTGCTGTTCCCTTaGGGGAAGGACTTCTGTTTA +
Preference number: 4 (lower is better)
Translates to: VGRKWDSSPPVMEEAGREILLFP*GKDFCL
Trigger: TAAACAGAAGTCCTTCCCTCAAGGGAACAGCAAGAT...CTCTCTCCCAGCCTCCTCCATAACAGGTGGCGATGAGTCCCATTTCCTCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACACCAGAGGATTCACCCTaGCAAGGCAGATACCCTTGT +
Preference number: 4 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTPEDSP*QGRYPC
Trigger: ACAAGGGTATCTGCCTTGTCAGGGTGAATCCTCTGG...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAAAGTCTCTGGAAGGCATaGGGCAGGTCCTGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQSLWKA*GRSWGS
Trigger: GGAACCCCAGGACCTGCCGCATGCCTTCCAGAGACT...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR GCA 90 bp GATGAGGGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTTGTGCGAATGCTGGGGCTaGTTTGGCCTTTCCCTATTC +
Preference number: 4 (lower is better)
Translates to: DEGRNQPGLSGTEKVRALCECWG*FGLSLF
Trigger: GAATAGGGAAAGGCCAAAGCAGCCCCAGCATTCGCA...CAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp AGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTAATCATCTACCCATGTaGCCCTCCCTCACCCCAAGA +
Preference number: 4 (lower is better)
Translates to: RAAGSSLLEQPVSHLATANHLPM*PSLTPR
Trigger: TCTTGGGGTGAGGGAGGGGCACATGGGTAGATGATT...AGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp ACCAGCACATCTCCAGCCACTGGGCAAAATGCATATTCAGTCTGTAGACAGGACGTTGTCTGCACGGAGTaGATCTGTGAGGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TSTSPATGQNAYSVCRQDVVCTE*ICEGRG
Trigger: TCCTCTGCCCTCACAGATGCACTCCGTGCAGACAAC...GTCCTGTCTACAGACTGAATATGCATTTTGCCCAGTGGCTGGAGATGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GTAGGGAGGAAATGGGACTCATCGCCACCTGTTATGGAGGAGGCTGGGAGAGAGTGGCAACCAGAAAAGTaGTTACTCCAGGTGCATAGA +
Preference number: 4 (lower is better)
Translates to: VGRKWDSSPPVMEEAGREWQPEK*LLQVHR
Trigger: TCTATGCACCTGGAGTAAGCACTTTTCTGGTTGCCA...CTCTCTCCCAGCCTCCTCCATAACAGGTGGCGATGAGTCCCATTTCCTCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp CCTCATAAAGACAACCTGAATCCCACCCAATCTGCCCAAAGCCCAGGAAAGGCCCATGGGTTACATAACTaGAGCAGAGCGCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: PHKDNLNPTQSAQSPGKAHGLHN*SRAPVL
Trigger: AAGGACTGGCGCTCTGCTCCAGTTATGTAACCCATG...GGCCTTTCCTGGGCTTTGGGCAGATTGGGTGGGATTCAGGTTGTCTTTATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAATGCCCTACGCCAGGCTaGGGGAACACTCACCAGAGA +
Preference number: 4 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQCPTPG*GNTHQR
Trigger: TCTCTGGTGAGTGTTCCCCCAGCCTGGCGTAGGGCA...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp GTGAGCCTGTGTGGTCAGGACATAACACCCAATATCTCTGAGTCTCCGGGGATAAGAAGTTTCACTCCTTaGCCTCCCTGGGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VSLCGQDITPNISESPGIRSFTP*PPWGFS
Trigger: TGAGAAGCCCCAGGGAGGCCAAGGAGTGAAACTTCT...TATCCCCGGAGACTCAGAGATATTGGGTGTTATGTCCTGACCACACAGGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCAGAAGTTTCACTCCTTaGCCTCCCTGGGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGRSFTP*PPWGFS
Trigger: TGAGAAGCCCCAGGGAGGCCAAGGAGTGAAACTTCT...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAAGGTCAGGGCCGGGGCTaGAGGAAACACTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQGQGRG*RKHCFL
Trigger: CAGAAAGCAGTGTTTCCTCCAGCCCCGGCCCTGACC...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAAAGACAAGAAGCCCCTTaGGTCCTGTGGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQRQEAP*VLWARV
Trigger: GACCCTGGCCCACAGGACCCAAGGGGCTTCTTGTCT...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp TCTGTGATGCTGGCAAGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCACAGATTCTGTTTCTTaGTTCTTGTGGTACTGTCAG +
Preference number: 4 (lower is better)
Translates to: SVMLARRHRHHEHGWVRATDSVS*FLWYCQ
Trigger: CTGACAGTACCACAAGAACCAAGAAACAGAATCTGT...GGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCTTGCCAGCATCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCAAAATCCATCCTGATTaGCAGCTCTTTTCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVKIHPD*QLFSSL
Trigger: GAGACTGGAAAAGAGCTGCCAATCAGGATGGATTTT...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp CCAACACAGCCACCCAGGTGCTGGGTTCAAATCTCGATAAACTACATAGGGGTACCACTGCCATGGAGGTaGGGACATAAGGAGAGGACT +
Preference number: 4 (lower is better)
Translates to: PTQPPRCWVQISINYIGVPLPWR*GHKERT
Trigger: AGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGG...TACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACACTCTCCAAGGAGGTCTaGGAATTGGAAGCTAATGGG +
Preference number: 4 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTLSKEV*ELEANG
Trigger: CCCATTAGCTTCCAATTCTCAGACCTCCTTGGAGAG...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR TCA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAACTCATGCGGTTACCCTaGGAAGAGTCCCCCGAAGCT +
Preference number: 4 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQLMRLP*EESPEA
Trigger: AGCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAG...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR TCA 90 bp CCTCATAAAGACAACCTGAATCCCACCCAATCTGCCCAAAGCCCAGGAAAGGCCCAAGAACAAGAGGCCTaGTCTCCTCCACAGAATCAT +
Preference number: 4 (lower is better)
Translates to: PHKDNLNPTQSAQSPGKAQEQEA*SPPQNH
Trigger: ATGATTCTGTGGAGGAGATCAGGCCTCTTGTTCTTG...GGCCTTTCCTGGGCTTTGGGCAGATTGGGTGGGATTCAGGTTGTCTTTATGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp CTCCAAAAGTTCCAGCCACATCTGGGCACATCTGATAAGTGTGCCCTTTATAATCACGGAGTGCATCTGTaGGGGCAGAGGAAACCTGCG +
Preference number: 4 (lower is better)
Translates to: LQKFQPHLGTSDKCALYNHGVHL*GQRKPA
Trigger: CGCAGGTTTCCTCTGCCCTCACAGATGCACTCCGTG...ATTATAAAGGGCACACTTATCAGATGTGCCCAGATGTGGCTGGAACTTTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp CCCTTGTGTGGCTGGGGCCTCTCTCCAAGGAGGTCTGAGAATTGGAAGCTAATGGAGGAACTCAAGCTGTaGTCAAGCCTCATAAAGACA +
Preference number: 4 (lower is better)
Translates to: PLCGWGLSPRRSENWKLMEELKL*SSLIKT
Trigger: TGTCTTTATGAGGCTTGAGCACAGCTTGAGTTCCTC...CATTAGCTTCCAATTCTCAGACCTCCTTGGAGAGAGGCCCCAGCCACACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GTGAGCCTGTGTGGTCAGGACATAACACCCAATATCTCTGAGTCTCCGGGGATAACACAGCCACCCAGGTaGTGGGTTCAAATCTCGATA +
Preference number: 4 (lower is better)
Translates to: VSLCGQDITPNISESPGITQPPR*WVQISI
Trigger: TATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGT...TATCCCCGGAGACTCAGAGATATTGGGTGTTATGTCCTGACCACACAGGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GTGAGAGTCAGGCTGAGAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACAGGCGAAAGTGAACTaGGGCATGCCCTACGCCAGG +
Preference number: 4 (lower is better)
Translates to: VRVRLRRALAKSRLKIHTQAKVN*GMPYAR
Trigger: CCTGGCGTAGGGCATGCCCCAGTTCACTTTCGCCTG...TGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTCTCAGCCTGACTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTAGGAGGTCTGAGAATTaGAAGCTAATGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GCWKFSARAASFPFSNSSRRSEN*KLMGVG
Trigger: GCCCACACCCATTAGCTTCCAATTCTCAGACCTCCT...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp ACCAGCACATCTCCAGCCACTGGGCAAAATGCATATTCAGTCTGTAGACAGGACTCTGACTTTGCTCCTTaGCTGAGCTGCTCCCTGATG +
Preference number: 4 (lower is better)
Translates to: TSTSPATGQNAYSVCRQDSDFAP*LSCSLM
Trigger: CATCAGGGAGCAGCTCAGCCAAGGAGCAAAGTCAGA...GTCCTGTCTACAGACTGAATATGCATTTTGCCCAGTGGCTGGAGATGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GATGAGGGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTTGTATCTAGTATCCCTCTaGAGCCAAGGGAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: DEGRNQPGLSGTEKVRALYLVSL*SQGSSP
Trigger: GGGAGAACTCCCTTGGCTCCAGAGGGATACTAGATA...CAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp ACCAGCACATCTCCAGCCACTGGGCAAAATGCATATTCAGTCTGTAGACAGGACATAGCAGTGTTGCCATaGCAACAGAGGCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TSTSPATGQNAYSVCRQDIAVLP*QQRLGE
Trigger: CTCTCCCAGCCTCTGTTGCCATGGCAACACTGCTAT...GTCCTGTCTACAGACTGAATATGCATTTTGCCCAGTGGCTGGAGATGTGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp TTCTCCAGGGTCAGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATATAGGGGTATATAGGTaGGGAACGTTAGCACCATTG +
Preference number: 4 (lower is better)
Translates to: FSRVRAAGSSLLEQPVSHIGVYR*GTLAPL
Trigger: CAATGGTGCTAACGTTCCCCACCTATATACCCCTAT...ATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTACCCTTCACACTTCTTaGTCTTCCATTCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RAAGSSLLEQPVSHLATATLHTS*SSIQQP
Trigger: AGGCTGCTGAATGGAAGATCAAGAAGTGTGAAGGGT...AGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTCCACCTTTGCAGTTGTaGACCAAGTATCTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GCWKFSARAASFPFSNSSPPLQL*TKYLSP
Trigger: TGGAGACAGATACTTGGTTCACAACTGCAAAGGTGG...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCGACTGGACAAAGACATaGAGCCATTTGTTCCGGTTC +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGDWTKT*SHLFRF
Trigger: GAACCGGAACAAATGGCTTCATGTCTTTGTCCAGTC...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCTGCAGGAGTTTAGCATaGTATAGATTGCTACTTTAC +
Preference number: 4 (lower is better)
Translates to: SSPSPRRHMPHAVTLRRVCRSLA*YRLLLY
Trigger: GTAAAGTAGCAATCTATATCATGCTAAACTCCTGCA...GACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp ACAAGAAGCCCCTTGGGTCCTGTGGGCCAGGGTCCTAGGCAACACTCAAGTCACTTCTATGAACCCATATaGTACATGCAAAAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TRSPLGPVGQGPRQHSSHFYEPI*YMQKAL
Trigger: AAGGGCTTTTTGCATGTAGCATATGGGTTCATAGAA...GTGACTTGAGTGTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGCTTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCGATATGTCTGTTGTCTaGACGGAGTGCATCTGTGAG +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGDMSVV*TECICE
Trigger: CTCACAGATGCACTCCGTGCAGACAACAGACATATC...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GTGAGCCTGTGTGGTCAGGACATAACACCCAATATCTCTGAGTCTCCGGGGATAAGGAATGAGGTGGGGTaGTTTGATCAGCATGGAGAT +
Preference number: 4 (lower is better)
Translates to: VSLCGQDITPNISESPGIRNEVG*FDQHGD
Trigger: ATCTCCATGCTGATCAAACCACCCCACCTCATTCCT...TATCCCCGGAGACTCAGAGATATTGGGTGTTATGTCCTGACCACACAGGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAATCTTGCCCCAGGTCCTaGAATCCCAGGAGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQSCPRS*NPRRVS
Trigger: TGAGACTCTCCTGGGATTCCAGGACCTGGGGCAAGA...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CCA 90 bp CTCCAAAAGTTCCAGCCACATCTGGGCACATCTGATAAGTGTGCCCTTTATAATGCTTCTCCCAGGTTTTaGGCGAACCAGCCGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LQKFQPHLGTSDKCALYNASPRF*ANQPRK
Trigger: CTTCCTCGGCTGGTTCGCCCAAAACCTGGGAGAAGC...ATTATAAAGGGCACACTTATCAGATGTGCCCAGATGTGGCTGGAACTTTTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp ACCCTAAGAGTTTCCACTGAAGGCACCACATATGAACGCAGTCCCCTCTATGGCAGTTCCAGCCACATCTaGGCACATCTGATAAGTGTG +
Preference number: 4 (lower is better)
Translates to: TLRVSTEGTTYERSPLYGSSSHI*AHLISV
Trigger: CACACTTATCAGATGTGCCCAGATGTGGCTGGAACT...GCCATAGAGGGGACTGCGTTCATATGTGGTGCCTTCAGTGGAAACTCTTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACATTCAAGAGCCTGGATTaGAATGTGGCCATCTTGAGT +
Preference number: 4 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTFKSLD*NVAILS
Trigger: ACTCAAGATGGCCACATTTCAATCCAGGCTCTTGAA...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp CCAACACAGCCACCCAGGTGCTGGGTTCAAATCTCGATAAACTACATAGGGGTATCTTCCTCTTCATTTTaGAGAAGCCGTGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: PTQPPRCWVQISINYIGVSSSSF*RSRGDH
Trigger: GTGGTCTCCACGGCTTCTGCAAAATGAAGAGGAAGA...TACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GTGAGAGTCAGGCTGAGAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACTCCAGGGTCAGGGCTaGTGGAAGTTCTCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: VRVRLRRALAKSRLKIHTLQGQG*WKFSAR
Trigger: TCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAG...TGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTCTCAGCCTGACTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR GCA 90 bp CTTCTTGATCTTCCATTCAGCAGCCTGAAGCCCAAGAGGGAAAATGGCCATGGGAGTGCTTACTCCAGGTaGATAGATTCGGGAAACCAT +
Preference number: 4 (lower is better)
Translates to: LLDLPFSSLKPKRENGHGSAYSR*IDSGNH
Trigger: ATGGTTTCCCGAATCTATGCACCTGGAGTAAGCACT...CCCATGGCCATTTTCCCTCTTGGGCTTCAGGCTGCTGAATGGAAGATCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GTGAGAGTCAGGCTGAGAAGAGCACTGGCTAAATCAAGACTTAAGATACACACAGGCAAAGGAAGGGGTTaGAGGATGGGAGGAGGAACT +
Preference number: 4 (lower is better)
Translates to: VRVRLRRALAKSRLKIHTGKGRG*RMGGGT
Trigger: AGTTCCTCCTCCCATCCTCCAACCCCTTCCTTTGCC...TGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTCTCAGCCTGACTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp TTCTCCAGGGTCAGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATGAGCAGAGAAGGAAATaGCATTCTGATAAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: FSRVRAAGSSLLEQPVSHEQRRK*HSDKKV
Trigger: AACCTTTTTATCAGAATGTCATTTCCTTCTCTGCTC...ATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp CTTCTTGATCTTCCATTCAGCAGCCTGAAGCCCAAGAGGGAAAATGGCCATGGGTTTATTGCTGAATCTTaGTGTTCCCTTGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLDLPFSSLKPKRENGHGFIAES*CSLEGR
Trigger: CCTTCCCTCAAGGGAACAGCAAGATTCAGCAATAAA...CCCATGGCCATTTTCCCTCTTGGGCTTCAGGCTGCTGAATGGAAGATCAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp ACCAGCACATCTCCAGCCACTGGGCAAAATGCATATTCAGTCTGTAGACAGGACTTTGTTCCGGTTCTTTaGTGGAGGGACAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: TSTSPATGQNAYSVCRQDFVPVL*WRDRRK
Trigger: CTTTCTTCTGTCCCTCCACCAAAGAACCGGAACAAA...GTCCTGTCTACAGACTGAATATGCATTTTGCCCAGTGGCTGGAGATGTGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAAATTTCTTCCTCAGTATaGCGACTTCCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQISSSV*RLPPGM
Trigger: CATCCCTGGAGGAAGTCGTCATACTGAGGAAGAAAT...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp GTGAGAGTCAGGCTGAGAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACAGCCACCCAGGTGCTaGGTTCAAATCTCGATAAAC +
Preference number: 4 (lower is better)
Translates to: VRVRLRRALAKSRLKIHTQPPRC*VQISIN
Trigger: GTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTG...TGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTCTCAGCCTGACTCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR TCA 90 bp GTGAGAGTCAGGCTGAGAAGAGCACTGGCTAAATCAAGACTTAAGATACACACATTCTTCTGTCCTTTGTaGCCCCACTGGCCTTTATTG +
Preference number: 4 (lower is better)
Translates to: VRVRLRRALAKSRLKIHTFFCPL*PHWPLL
Trigger: CAATAAAGGCCAGTGGGGTCACAAAGGACAGAAGAA...TGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTCTCAGCCTGACTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp GTGAGAGTCAGGCTGAGAAGAGCACTGGCTAAATCAAGACTTAAGATACACACATCTTCCTCTTCATTTTaGAGAAGCCGTGGAGACCAC +
Preference number: 4 (lower is better)
Translates to: VRVRLRRALAKSRLKIHTSSSSF*RSRGDH
Trigger: GTGGTCTCCACGGCTTCTGCAAAATGAAGAGGAAGA...TGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTCTCAGCCTGACTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
3UTR CAA 72 bp CAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTaGAGCATCATGAACAACGGGATAAAAATAGCAGTG +
Preference number: 4 (lower is better)
Translates to: QPGLSGTEKVRA*SIMNNGIKIAV
Trigger: CACTGCTATTTTTATCCCGTTGTTCATGATGCTCAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 72 bp ACTGGACAAAGACATGAAGCCATTTGTTCCGGTTCTTaGGTGGAGGGACAGAAGAAAGGGAAGTACTGGTTT +
Preference number: 4 (lower is better)
Translates to: TGQRHEAICSGS*VEGQKKGKYWF
Trigger: AAACCAGTACTTCCCTTTCTTCTGTCCCTCCACCAAAGAACCGGAACAAATGGCTTCATGTCTTTGTCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CCA 90 bp CTCCAAAAGTTCCAGCCACATCTGGGCACATCTGATAAGTGTGCCCTTTATAATCACATCTCCAGCCACTaGGCAAAATGCATATTCAGT +
Preference number: 4 (lower is better)
Translates to: LQKFQPHLGTSDKCALYNHISSH*AKCIFS
Trigger: ACTGAATATGCATTTTGCCCAGTGGCTGGAGATGTG...ATTATAAAGGGCACACTTATCAGATGTGCCCAGATGTGGCTGGAACTTTTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
3UTR CAA 72 bp CCCCACTGGCCTTTATTGCTGAATCTTGCTGTTCCCTaGAGGGAAGGACTTCTGTTTATAATTCTTTGGATA +
Preference number: 4 (lower is better)
Translates to: PHWPLLLNLAVP*REGLLFIILWI
Trigger: TATCCAAAGAATTATAAACAGAAGTCCTTCCCTCAAGGGAACAGCAAGATTCAGCAATAAAGGCCAGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR GCA 90 bp CTCCAAAAGTTCCAGCCACATCTGGGCACATCTGATAAGTGTGCCCTTTATAATAGATTCGGGAAACCATaGAACTTGAGCCAAAATGAA +
Preference number: 4 (lower is better)
Translates to: LQKFQPHLGTSDKCALYNRFGKP*NLSQNE
Trigger: TTCATTTTGGCTCAAGTTGCATGGTTTCCCGAATCT...ATTATAAAGGGCACACTTATCAGATGTGCCCAGATGTGGCTGGAACTTTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS GCA 90 bp CCGACGGCCGCGGTCAGCCGGCATTCCGGAGCAGCGCGTCGGAGCTaGAACTTCGCGCCTAAGCGCCCGCACCTCGCAGCCCGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: PTAAVSRHSGAARRS*NFAPKRPHLAARRA
Trigger: CGCCCGCCGGGCTGCGAGGTGCGGGCGCTTAGGCGCGAAGTTGCAGCTCCGACGCGCTGCTCCGGAATGCCGGCTGACCGCGGCCGTCGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629113.1
CDS GCA 90 bp GATTCAACTCCCAATCCGGTGAATCCGCCTAGCGCCTTCGGGTCCTaGCGCCCCCGGCCAGTCCCGACCCGCACACATATGCAGGCATTT +
Preference number: 5 (lower is better)
Translates to: DSTPNPVNPPSAFGS*RPRPVPTRTHMQAF
Trigger: AAATGCCTGCATATGTGTGCGGGTCGGGACTGGCCGGGGGCGGCAGGACCCGAAGGCGCTAGGCGGATTCACCGGATTGGGAGTTGAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp CTCCTTGGCCTCCCTGGGGCTTCTCAGTCTCTGGAAGGCATGCGGCAGGTCCTGACTCTCAGGGGTCTCTaGCCACTGCCATGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LLGLPGASQSLEGMRQVLTLRGL*PLPWRW
Trigger: CCACCTCCATGGCAGTGGCAAGAGACCCCTGAGAGT...CAGGACCTGCCGCATGCCTTCCAGAGACTGAGAAGCCCCAGGGAGGCCAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS TCA 90 bp TCAGGCCTGGGACCTGCTGGGGGCTTGATGGAGGGGCCCTGGTTCTaGTCACACCGCCGTCTCCCGCTCTCTGTGAACTTCCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: SGLGPAGGLMEGPWF*SHRRLPLSVNFLLL
Trigger: AAGAAGGAGGAAGTTCACAGAGAGCGGGAGACGGCGGTGTGATCAGAACCAGGGCCCCTCCATCAAGCCCCCAGCAGGTCCCAGGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CAA 90 bp GGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCACTGACTTACTCCCCTaGGGCCTGGCTGTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GGGSSLDGLTAKPLQLQSTDLLP*GLAVGG
Trigger: CCCTCCTACAGCCAGGCCCAAGGGGAGTAAGTCAGT...GGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp CAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCTGCTTCTCCCAGGTTTaGGGCGAACCAGCCGAGGAA +
Preference number: 5 (lower is better)
Translates to: QGSSPGGGSSLDGLTAKPCFSQV*GEPAEE
Trigger: TTCCTCGGCTGGTTCGCCCAAAACCTGGGAGAAGCA...GGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp GGCCTGGGGAACAGGCCTCCCCACATCTGTGATGCTGGCAAGGAGGCACAGGCATCCACTCAGAACACTTaGACCTTGGGACCCCACCCA +
Preference number: 5 (lower is better)
Translates to: GLGNRPPHICDAGKEAQASTQNT*TLGPHP
Trigger: TGGGTGGGGTCCCAAGGTCAAAGTGTTCTGAGTGGA...TGCCTGTGCCTCCTTGCCAGCATCACAGATGTGGGGAGGCCTGTTCCCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp AGCAACAGCTCTCCTAGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAGAGACAAGAAGCCCCTaGGGTCCTGTGGGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SNSSPSPRRHMPHAVTLRETRSP*GPVGQG
Trigger: ACCCTGGCCCACAGGACCCAAGGGGCTTCTTGTCTC...TCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCTAGGAGAGCTGTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp GGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTGCAGCTGCAATCCCTGCCAAGCCGAGGAAGACTTTaGCCCTCCCTAGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GSSLDGLTAKPLQLQSLPSRGRL*PSLVAQ
Trigger: CTGGGCAACTAGGGAGGGCAAAAGTCTTCCTCGGCT...TGGCAGGGATTGCAGCTGCAGGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS GCA 90 bp TCACCAATCTCTTTCTTCCCTCCTTGTCCGATTCTCTGCTGTAGCTaGCCGCACGCCCGATTTCCGGGCACAGCTAGAAAGACCGGGACG +
Preference number: 5 (lower is better)
Translates to: SPISFFPPCPILCCS*PHARFPGTARKTGT
Trigger: CGTCCCGGTCTTTCTAGCTGTGCCCGGAAATCGGGCGTGCGGGCAGCTACAGCAGAGAATCGGACAAGGAGGGAAGAAAGAGATTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS GCA 90 bp CTCTCCCCCTCACCAATCTCTTTCTTCCCTCCTTGTCCGATTCTCTaGTGTAGCTGCCCGCACGCCCGATTTCCGGGCACAGCTAGAAAG +
Preference number: 5 (lower is better)
Translates to: LSPSPISFFPPCPIL*CSCPHARFPGTARK
Trigger: CTTTCTAGCTGTGCCCGGAAATCGGGCGTGCGGGCAGCTACAGCAGAGAATCGGACAAGGAGGGAAGAAAGAGATTGGTGAGGGGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp CAAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTCCAGATATGTCTGTaGTCTGCACGGAGTGCATCT +
Preference number: 5 (lower is better)
Translates to: QGSSPGGGSSLDGLTAKPLQICL*SARSAS
Trigger: AGATGCACTCCGTGCAGACAACAGACATATCTGGAG...GGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp TCTGTGATGCTGGCAAGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCCAGGTCTGGGAGCTCTaGGCTTTGGCAATTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SVMLARRHRHHEHGWVRAQVWEL*ALAISS
Trigger: GGAAGAAATTGCCAAAGCCAAGAGCTCCCAGACCTG...GGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCTTGCCAGCATCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp AAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTTAACAGAGCAGCGTTaGCCGGCATGCTTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: KGVLPGEEALWMGSLPNPLTEQR*PACFSV
Trigger: CACTGAAAAGCATGCCGGCAAACGCTGCTCTGTTAA...GGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS CCA 90 bp ATTTTGCAGAAGCCGTGGAGACCACAGAAGCAGGCGAAAGTGAACTaGGGCATGCCCTACGCCAGGCTGGGGGAACACTCACCAGAGATA +
Preference number: 5 (lower is better)
Translates to: ILQKPWRPQKQAKVN*GMPYARLGEHSPEI
Trigger: TATCTCTGGTGAGTGTTCCCCCAGCCTGGCGTAGGGCATGCCCCAGTTCACTTTCGCCTGCTTCTGTGGTCTCCACGGCTTCTGCAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CAA 90 bp CTCCTTGGCCTCCCTGGGGCTTCTCAGTCTCTGGAAGGCATGCGGCAGGTCCTGTTGCACTCACTTCCTTaGTGTCTCTCTCTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LLGLPGASQSLEGMRQVLLHSLP*CLSLSF
Trigger: GAAAGAGAGAGAGAGACACAAAGGAAGTGAGTGCAA...CAGGACCTGCCGCATGCCTTCCAGAGACTGAGAAGCCCCAGGGAGGCCAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CAA 90 bp ACAAGAAGCCCCTTGGGTCCTGTGGGCCAGGGTCCTAGGCAACACTCAAGTCACATGAGGTGGGGTGGTTaGATCAGCATGGAGATGAGC +
Preference number: 5 (lower is better)
Translates to: TRSPLGPVGQGPRQHSSHMRWGG*ISMEMS
Trigger: GCTCATCTCCATGCTGATCAAACCACCCCACCTCAT...GTGACTTGAGTGTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGCTTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp AAGGGAGTTCTCCCGGGGGAGGAAGCTCTCTGGATGGGCTCACTGCCAAACCCCTTCTTCCTCTTCATTTaGCAGAAGCCGTGGAGACCA +
Preference number: 5 (lower is better)
Translates to: KGVLPGEEALWMGSLPNPFFLFI*QKPWRP
Trigger: TGGTCTCCACGGCTTCTGCAAAATGAAGAGGAAGAA...GGGGTTTGGCAGTGAGCCCATCCAGAGAGCTTCCTCCCCCGGGAGAACTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp CTCCTTGGCCTCCCTGGGGCTTCTCAGTCTCTGGAAGGCATGCGGCAGGTCCTGGAGAAAGTTAGAGCTTaGAGCATCATGAACAACGGG +
Preference number: 5 (lower is better)
Translates to: LLGLPGASQSLEGMRQVLEKVRA*SIMNNG
Trigger: CCCGTTGTTCATGATGCTCAAAGCTCTAACTTTCTC...CAGGACCTGCCGCATGCCTTCCAGAGACTGAGAAGCCCCAGGGAGGCCAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp AGCCCAAGGCGGCACATGCCTCATGCGGTTACCCTGAGAAGAGTCCCCCGAAGCCTTCAAGAGCCTGGATaGAAATGTGGCCATCTTGAG +
Preference number: 5 (lower is better)
Translates to: SPRRHMPHAVTLRRVPRSLQEPG*KCGHLE
Trigger: CTCAAGATGGCCACATTTCAATCCAGGCTCTTGAAG...GCTTCGGGGGACTCTTCTCAGGGTAACCGCATGAGGCATGTGCCGCCTTGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp TTCTCCAGGGTCAGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATCACATATGCAGGCATTaGCACACACGCGCGCACACA +
Preference number: 5 (lower is better)
Translates to: FSRVRAAGSSLLEQPVSHHICRH*HTRAHT
Trigger: TGTGTGCGCGCGTGTGTGCAAATGCCTGCATATGTG...ATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCTGACCCTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp AGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCGGGGCTGGAGGAAACTCTGTTTCTTGGTTCTaGTGGTACTGTCAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: RRHRHHEHGWVRAGAGGNSVSWF*WYCQLD
Trigger: ATCAAGCTGACAGTACCACAAGAACCAAGAAACAGA...GTTTCCTCCAGCCCCGGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp CCCTTGTGTGGCTGGGGCCTCTCTCCAAGGAGGTCTGAGAATTGGAAGCTAATGCTAAGCCGGCTCCTCTaGCACTCACTTCCTTTGTGT +
Preference number: 5 (lower is better)
Translates to: PLCGWGLSPRRSENWKLMLSRLL*HSLPLC
Trigger: ACACAAAGGAAGTGAGTGCAAGAGGAGCCGGCTTAG...CATTAGCTTCCAATTCTCAGACCTCCTTGGAGAGAGGCCCCAGCCACACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CAA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACATCCTATCTTGGGGCCTaGCCCTCTCTACCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTSYLGA*PSLPRS
Trigger: TGACCTGGGTAGAGAGGGCAAGGCCCCAAGATAGGA...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp TCTGTGATGCTGGCAAGGAGGCACAGGCATCATGAACACGGGTGGGTCAGGGCCAATCTTGCTGTTCCCTaGAGGGAAGGACTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SVMLARRHRHHEHGWVRANLAVP*REGLLF
Trigger: AAACAGAAGTCCTTCCCTCAAGGGAACAGCAAGATT...GGCCCTGACCCACCCGTGTTCATGATGCCTGTGCCTCCTTGCCAGCATCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp GACTCTCCTATCTTGGGGCCTTGCCCTCTCTACCCAGGTCACCTGTTTACCTGTGAGAGAGGAGGCAATTaGCCAAGGTCAGGAGTCAGT +
Preference number: 5 (lower is better)
Translates to: DSPILGPCPLYPGHLFTCERGGN*PRSGVS
Trigger: ACTGACTCCTGACCTTGGCAAATTGCCTCCTCTCTC...ACAGGTAAACAGGTGACCTGGGTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp ACCAGCACATCTCCAGCCACTGGGCAAAATGCATATTCAGTCTGTAGACAGGACCCTGACTCTCCTATCTaGGGGCCTTGCCCTCTCTAC +
Preference number: 5 (lower is better)
Translates to: TSTSPATGQNAYSVCRQDPDSPI*GPCPLY
Trigger: GTAGAGAGGGCAAGGCCCCAAGATAGGAGAGTCAGG...GTCCTGTCTACAGACTGAATATGCATTTTGCCCAGTGGCTGGAGATGTGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp GTGAGAGTCAGGCTGAGAAGAGCACTGGCTAAATCAAGACTTAAGATACACACAGAAGGGGCTGCCGGCTaGGAGGCAGAGGACAACTGG +
Preference number: 5 (lower is better)
Translates to: VRVRLRRALAKSRLKIHTEGAAG*EAEDNW
Trigger: CCAGTTGTCCTCTGCCTCCAAGCCGGCAGCCCCTTC...TGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTCTCAGCCTGACTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp ACAAGAAGCCCCTTGGGTCCTGTGGGCCAGGGTCCTAGGCAACACTCAAGTCACCTCTTGCTCTTGCTTTaGGGTCAGAGAGATAGAACA +
Preference number: 5 (lower is better)
Translates to: TRSPLGPVGQGPRQHSSHLLLLL*GQRDRT
Trigger: TGTTCTATCTCTCTGACCCAAAAGCAAGAGCAAGAG...GTGACTTGAGTGTTGCCTAGGACCCTGGCCCACAGGACCCAAGGGGCTTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACATTAGGAGGGCAGGGGTaGGCTTATACCACCAACAGG +
Preference number: 5 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTLGGQG*AYTTNR
Trigger: CCTGTTGGTGGTATAAGCCAACCCCTGCCCTCCTAA...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp TGCCACTGCCATGGAGGTGGGGACATAAGGAGAGGACTAGAAGCTGGGCCAGAGATTTGTTCCGGTTCTTaGGTGGAGGGACAGAAGAAA +
Preference number: 5 (lower is better)
Translates to: CHCHGGGDIRRGLEAGPEICSGS*VEGQKK
Trigger: TTTCTTCTGTCCCTCCACCAAAGAACCGGAACAAAT...CTCTGGCCCAGCTTCTAGTCCTCTCCTTATGTCCCCACCTCCATGGCAGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp AGGTCTGAGAATTGGAAGCTAATGGGTGTGGGCATGAGGAGGATGAGAGGCACACTAAGCCGGCTCCTCTaGCACTCACTTCCTTTGTGT +
Preference number: 5 (lower is better)
Translates to: RSENWKLMGVGMRRMRGTLSRLL*HSLPLC
Trigger: ACACAAAGGAAGTGAGTGCAAGAGGAGCCGGCTTAG...TGTGCCTCTCATCCTCCTCATGCCCACACCCATTAGCTTCCAATTCTCAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CAA 90 bp CCAACACAGCCACCCAGGTGCTGGGTTCAAATCTCGATAAACTACATAGGGGTACAGAACACTTTGACCTaGGGACCCCACCCATGTTCC +
Preference number: 5 (lower is better)
Translates to: PTQPPRCWVQISINYIGVQNTLT*GPHPCS
Trigger: GGAACATGGGTGGGGTCCCAAGGTCAAAGTGTTCTG...TACCCCTATGTAGTTTATCGAGATTTGAACCCAGCACCTGGGTGGCTGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp ACCAGCACATCTCCAGCCACTGGGCAAAATGCATATTCAGTCTGTAGACAGGACAATGCTGGGGCTGCTTaGGCCTTTCCCTATTCCCTG +
Preference number: 5 (lower is better)
Translates to: TSTSPATGQNAYSVCRQDNAGAA*AFPYSL
Trigger: CAGGGAATAGGGAAAGGCCAAAGCAGCCCCAGCATT...GTCCTGTCTACAGACTGAATATGCATTTTGCCCAGTGGCTGGAGATGTGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp GTGAGCCTGTGTGGTCAGGACATAACACCCAATATCTCTGAGTCTCCGGGGATACCAGCTCAGTGCTCCTaGCATCCCACTCTAACACTT +
Preference number: 5 (lower is better)
Translates to: VSLCGQDITPNISESPGIPAQCS*HPTLTL
Trigger: AAGTGTTAGAGTGGGATGCAAGGAGCACTGAGCTGG...TATCCCCGGAGACTCAGAGATATTGGGTGTTATGTCCTGACCACACAGGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp TCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTCCTAGCCCAAGGCGGACAAGGCAGATACCCTaGTCAGCAATATGGACTTGG +
Preference number: 5 (lower is better)
Translates to: SARAASFPFSNSSPSPRRTRQIP*SAIWTW
Trigger: CCAAGTCCATATTGCTGACAAGGGTATCTGCCTTGT...CCGCCTTGGGCTAGGAGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp GATGAGGGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTTGGGAACGTTAGCACCATaGACTCTCAGGGGTCTCTTG +
Preference number: 5 (lower is better)
Translates to: DEGRNQPGLSGTEKVRALGTLAP*TLRGLL
Trigger: CAAGAGACCCCTGAGAGTCAATGGTGCTAACGTTCC...CAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp AGGGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTTTCTTCCTCTTCATTTaGCAGAAGCCGTGGAGACCA +
Preference number: 5 (lower is better)
Translates to: RAAGSSLLEQPVSHLATAFFLFI*QKPWRP
Trigger: TGGTCTCCACGGCTTCTGCAAAATGAAGAGGAAGAA...AGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS-3UTR CAA 90 bp GATGAGGGCAGAAACCAGCCTGGCCTCTCTGGAACAGAGAAAGTTAGAGCTTTGTGGGAGCTCTTGGCTTaGGCAATTTCTTCCTCAGTA +
Preference number: 5 (lower is better)
Translates to: DEGRNQPGLSGTEKVRALWELLA*AISSSV
Trigger: TACTGAGGAAGAAATTGCCAAAGCCAAGAGCTCCCA...CAAAGCTCTAACTTTCTCTGTTCCAGAGAGGCCAGGCTGGTTTCTGCCCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAAGCAGAGCGCCAGTCCTaGAGATCTCTTCTAGAATCA +
Preference number: 5 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQAERQS*RSLLES
Trigger: TGATTCTAGAAGAGATCTCAAGGACTGGCGCTCTGC...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAACACCCTTCACACTTCTaGATCTTCCATTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQHPSHF*IFHSAA
Trigger: GGCTGCTGAATGGAAGATCAAGAAGTGTGAAGGGTG...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp GGCTGCTGGAAGTTCTCTGCTAGAGCAGCCAGTTTCCCATTTAGCAACAGCTCTGGGAAACCATGCAACTaGAGCCAAAATGAAACCAAT +
Preference number: 5 (lower is better)
Translates to: GCWKFSARAASFPFSNSSGKPCN*SQNETN
Trigger: ATTGGTTTCATTTTGGCTCAAGTTGCATGGTTTCCC...AGAGCTGTTGCTAAATGGGAAACTGGCTGCTCTAGCAGAGAACTTCCAGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS-3UTR CAA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAAATAAAAATAGCAGTGTaGCCATGGCAACAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQIKIAV*PWQQRL
Trigger: CAGCCTCTGTTGCCATGGCAACACTGCTATTTTTAT...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS GCA 90 bp CTCTCCCCCTCACCAATCTCTTTCTTCCCTCCTTGTCCGATTCTCTaGTGTAGCTTCCAGTGGAGAAAAATAATTATTCTTCAATGGGTT +
Preference number: 5 (lower is better)
Translates to: LSPSPISFFPPCPIL*CSFQWRKIIILQWV
Trigger: AACCCATTGAAGAATAATTATTTTTCTCCACTGGAAGCTACAGCAGAGAATCGGACAAGGAGGGAAGAAAGAGATTGGTGAGGGGGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625854.1
CDS-3UTR CAA 90 bp GAAGAGCACTGGCTAAATCAAGACTTAAGATACACACACGGCTTCCTGCTCCAAAACAGATTCTGTTTCTaGGTTCTTGTGGTACTGTCA +
Preference number: 5 (lower is better)
Translates to: EEHWLNQDLRYTHGFLLQNRFCF*VLVVLS
Trigger: TGACAGTACCACAAGAACCAAGAAACAGAATCTGTT...TTGGAGCAGGAAGCCGTGTGTGTATCTTAAGTCTTGATTTAGCCAGTGCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS GCA 72 bp GCGGTCAGCCGGCATTCCGGAGCAGCGCGTCGGAGCTaGAACTTCGCGCCTAAGCGCCCGCACCTCGCAGCC +
Preference number: 6 (lower is better)
Translates to: AVSRHSGAARRS*NFAPKRPHLAA
Trigger: GGCTGCGAGGTGCGGGCGCTTAGGCGCGAAGTTGCAGCTCCGACGCGCTGCTCCGGAATGCCGGCTGACCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629113.1
CDS GCA 72 bp CCCAATCCGGTGAATCCGCCTAGCGCCTTCGGGTCCTaGCGCCCCCGGCCAGTCCCGACCCGCACACATATG +
Preference number: 6 (lower is better)
Translates to: PNPVNPPSAFGS*RPRPVPTRTHM
Trigger: CATATGTGTGCGGGTCGGGACTGGCCGGGGGCGGCAGGACCCGAAGGCGCTAGGCGGATTCACCGGATTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS TCA 72 bp GGACCTGCTGGGGGCTTGATGGAGGGGCCCTGGTTCTaGTCACACCGCCGTCTCCCGCTCTCTGTGAACTTC +
Preference number: 6 (lower is better)
Translates to: GPAGGLMEGPWF*SHRRLPLSVNF
Trigger: GAAGTTCACAGAGAGCGGGAGACGGCGGTGTGATCAGAACCAGGGCCCCTCCATCAAGCCCCCAGCAGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS TCA 72 bp TGCAGAAGCCGTGGAGACCACAGAAGCAGGCGAAAGTaGACTGGGGCATGCCCTACGCCAGGCTGGGGGAAC +
Preference number: 6 (lower is better)
Translates to: CRSRGDHRSRRK*TGACPTPGWGN
Trigger: GTTCCCCCAGCCTGGCGTAGGGCATGCCCCAGTTCACTTTCGCCTGCTTCTGTGGTCTCCACGGCTTCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS CCA 72 bp AAGCCGTGGAGACCACAGAAGCAGGCGAAAGTGAACTaGGGCATGCCCTACGCCAGGCTGGGGGAACACTCA +
Preference number: 6 (lower is better)
Translates to: KPWRPQKQAKVN*GMPYARLGEHS
Trigger: TGAGTGTTCCCCCAGCCTGGCGTAGGGCATGCCCCAGTTCACTTTCGCCTGCTTCTGTGGTCTCCACGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626538.2
ENST00000629624.2
CDS GCA 72 bp TCTTTCTTCCCTCCTTGTCCGATTCTCTGCTGTAGCTaGCCGCACGCCCGATTTCCGGGCACAGCTAGAAAG +
Preference number: 6 (lower is better)
Translates to: SFFPPCPILCCS*PHARFPGTARK
Trigger: CTTTCTAGCTGTGCCCGGAAATCGGGCGTGCGGGCAGCTACAGCAGAGAATCGGACAAGGAGGGAAGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS GCA 72 bp TCACCAATCTCTTTCTTCCCTCCTTGTCCGATTCTCTaGTGTAGCTGCCCGCACGCCCGATTTCCGGGCACA +
Preference number: 6 (lower is better)
Translates to: SPISFFPPCPIL*CSCPHARFPGT
Trigger: TGTGCCCGGAAATCGGGCGTGCGGGCAGCTACAGCAGAGAATCGGACAAGGAGGGAAGAAAGAGATTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626538.2
CDS GCA 72 bp TCACCAATCTCTTTCTTCCCTCCTTGTCCGATTCTCTaGTGTAGCTTCCAGTGGAGAAAAATAATTATTCTT +
Preference number: 6 (lower is better)
Translates to: SPISFFPPCPIL*CSFQWRKIIIL
Trigger: AAGAATAATTATTTTTCTCCACTGGAAGCTACAGCAGAGAATCGGACAAGGAGGGAAGAAAGAGATTGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000625854.1
ENST00000629624.2