RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BIRC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000023445

Ensembl transcript IDs: ENST00000263464.9, ENST00000526421.6, ENST00000527309.2, ENST00000528940.1, ENST00000532808.5, ENST00000615299.4, ENST00000673846.1

Found 293 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTaGACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGT +
Preference number: 1 (lower is better)
Translates to: PIPYRPCPISRRKEC*TETKNNLNRQALLG
Trigger: ACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR GCA 90 bp ATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATaGTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTG +
Preference number: 1 (lower is better)
Translates to: IPIPYRPCPISRRKE*CTETKNNLNRQALL
Trigger: CAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR TCA 90 bp CTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCTGCTCTTaGAGACCTAATACCTCTATAAGAAGCAAAGGACAGAGTTATGAC +
Preference number: 1 (lower is better)
Translates to: LPSPEYSLLQSYFCS*RPNTSIRSKGQSYD
Trigger: GTCATAACTCTGTCCTTTGCTTCTTATAGAGGTATTAGGTCTTCAAGAGCAGAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR CCA 90 bp CCACAGAAACTTGAATTCCTCTTCCCCAAGGTAGGTCATAGAAACTaGAACCATCTTTCCACAATGCCAGACTTACATCTTAAAGATAGT +
Preference number: 1 (lower is better)
Translates to: PQKLEFLFPKVGHRN*NHLSTMPDLHLKDS
Trigger: ACTATCTTTAAGATGTAAGTCTGGCATTGTGGAAAGATGGTTCCAGTTTCTATGACCTACCTTGGGGAAGAGGAATTCAAGTTTCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAGGGGTCTTTCCCTTCTaGCCTTACAGAGCCATCTGC +
Preference number: 2 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQGVFPF*PYRAIC
Trigger: GCAGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCC...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR TCA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGTTGCCTGCCTTCCCCTaGGTATTCCCTATTACAGTC +
Preference number: 2 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQLPAFP*VFPITV
Trigger: GACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAA...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGCCTTCTTCCAATAGGTaGGGCTGGCATGAGACTTCT +
Preference number: 2 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQPSSNR*GWHETS
Trigger: AGAAGTCTCATGCCAGCCCCACCTATTGGAAGAAGG...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR TCA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGCAAAGGACAGAGTTATaGCTCGGACGTGTTGAGTAC +
Preference number: 2 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQQRTEL*LGRVEY
Trigger: GTACTCAACACGTCCGAGTCATAACTCTGTCCTTTG...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGGGTCTCAGTATGCTaGCCAGGATGGATTCAAACT +
Preference number: 2 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQRVSVC*PGWIQT
Trigger: AGTTTGAATCCATCCTGGGCAGCATACTGAGACCCT...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTGGCAGGGTCTCAGTATaGTGCCCAGGATGGATTCAA +
Preference number: 2 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSGRVSV*CPGWIQ
Trigger: TTGAATCCATCCTGGGCAGCATACTGAGACCCTGCC...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAACCAGAACAACCTGTTaGTCCCAAGCATTGCTAACC +
Preference number: 2 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQTRTTC*SQALLT
Trigger: GGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGT...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR TCA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGGATTTTATGATGTGTTaGCCCCGTGTTCTACAAGTG +
Preference number: 2 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQDFMMC*PRVLQV
Trigger: CACTTGTAGAACACGGGGTCAACACATCATAAAATC...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTCCTTCTTCCAATAGGTaGGGCTGGCATGAGACTTCT +
Preference number: 2 (lower is better)
Translates to: IISPSHTGPALYPGGRNAPSSNR*GWHETS
Trigger: AGAAGTCTCATGCCAGCCCCACCTATTGGAAGAAGG...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR TCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTCAAAGGACAGAGTTATaGCTCGGACGTGTTGAGTAC +
Preference number: 2 (lower is better)
Translates to: IISPSHTGPALYPGGRNAQRTEL*LGRVEY
Trigger: GTACTCAACACGTCCGAGTCATAACTCTGTCCTTTG...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR TCA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGTCTTACTTCTGCTCTTaGAGACCTAATACCTCTATA +
Preference number: 2 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQSYFCS*RPNTSI
Trigger: TATAGAGGTATTAGGTCTTCAAGAGCAGAAGTAAGA...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR TCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTAGACCAAGAATAATCTaGACAGACAGGCCTTGCTGG +
Preference number: 2 (lower is better)
Translates to: IISPSHTGPALYPGGRNARPRII*TDRPCW
Trigger: CCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCT...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTAGGGTCTCAGTATGCTaGCCAGGATGGATTCAAACT +
Preference number: 2 (lower is better)
Translates to: IISPSHTGPALYPGGRNARVSVC*PGWIQT
Trigger: AGTTTGAATCCATCCTGGGCAGCATACTGAGACCCT...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAAGGGGGACATTTTGTTaGACTGACAATATGAAACAG +
Preference number: 2 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQRGTFC*TDNMKQ
Trigger: CTGTTTCATATTGTCAGTGCAACAAAATGTCCCCCT...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAATGGATTCAAACTCCTaGGCTCAAGTAATTCTCTTG +
Preference number: 2 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQMDSNS*AQVILL
Trigger: CAAGAGAATTACTTGAGCCCAGGAGTTTGAATCCAT...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAGGCTTTAAGAAGGTATaGAAAGAGTCTGGGAGTGAC +
Preference number: 2 (lower is better)
Translates to: CCTETKNNLNRQALLGPQGFKKV*KESGSD
Trigger: GTCACTCCCAGACTCTTTCCATACCTTCTTAAAGCC...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR TCA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAGATTTTATGATGTGTTaGCCCCGTGTTCTACAAGTG +
Preference number: 2 (lower is better)
Translates to: CCTETKNNLNRQALLGPQDFMMC*PRVLQV
Trigger: CACTTGTAGAACACGGGGTCAACACATCATAAAATC...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAAGAGAAATGTGTCCCTaGTGTTTTGTTTTTGTTCTG +
Preference number: 2 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQREMCP*CFVFVL
Trigger: CAGAACAAAAACAAAACACCAGGGACACATTTCTCT...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp GACTCGGACGTGTTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACCAGAACAACCTGTTaGTCCCAAGCATTGCTAACC +
Preference number: 2 (lower is better)
Translates to: DSDVLSTNNIMQRGTFCCTRTTC*SQALLT
Trigger: GGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGT...GCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAACACGTCCGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR TCA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAATCTTACTTCTGCTCTTaGAGACCTAATACCTCTATA +
Preference number: 2 (lower is better)
Translates to: CCTETKNNLNRQALLGPQSYFCS*RPNTSI
Trigger: TATAGAGGTATTAGGTCTTCAAGAGCAGAAGTAAGA...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTGGGGTCTTTCCCTTCTaGCCTTACAGAGCCATCTGC +
Preference number: 2 (lower is better)
Translates to: LHFKEISLPASECRDGFFGVFPF*PYRAIC
Trigger: GCAGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCC...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCGTATGCTGCCCAGGATaGATTCAAACTCCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFVCCPG*IQTPGL
Trigger: GAGCCCAGGAGTTTGAATCCATCCTGGGCAGCATAC...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAAGAGAAATGTGTCCCTaGTGTTTTGTTTTTGTTCTG +
Preference number: 2 (lower is better)
Translates to: CCTETKNNLNRQALLGPQREMCP*CFVFVL
Trigger: CAGAACAAAAACAAAACACCAGGGACACATTTCTCT...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR TCA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCGATTTTATGATGTGTTaGCCCCGTGTTCTACAAGTG +
Preference number: 2 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFDFMMC*PRVLQV
Trigger: CACTTGTAGAACACGGGGTCAACACATCATAAAATC...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGGGCAGGGTCTCAGTATaGTGCCCAGGATGGATTCAA +
Preference number: 2 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMGRVSV*CPGWIQ
Trigger: TTGAATCCATCCTGGGCAGCATACTGAGACCCTGCC...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTGGGGTCTTTCCCTTCTaGCCTTACAGAGCCATCTGC +
Preference number: 2 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPGVFPF*PYRAIC
Trigger: GCAGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCC...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCAGGGGGACATTTTGTTaGACTGACAATATGAAACAG +
Preference number: 2 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFRGTFC*TDNMKQ
Trigger: CTGTTTCATATTGTCAGTGCAACAAAATGTCCCCCT...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCAGTATGCTGCCCAGGATaGATTCAAACTCCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEAVCCPG*IQTPGL
Trigger: GAGCCCAGGAGTTTGAATCCATCCTGGGCAGCATAC...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTAGGGTCTCAGTATGCTaGCCAGGATGGATTCAAACT +
Preference number: 2 (lower is better)
Translates to: LHFKEISLPASECRDGFFRVSVC*PGWIQT
Trigger: AGTTTGAATCCATCCTGGGCAGCATACTGAGACCCT...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTTCTCTGATGTTATCCTaGCCTCCTGTCTCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPSLMLS*PPVSAS
Trigger: TGAGGCTGAGACAGGAGGGCAGGATAACATCAGAGA...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR CAA 90 bp AATACCTCTATAAGAAGCAAAGGACAGAGTTATGACTCGGACGTGTaGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACT +
Preference number: 2 (lower is better)
Translates to: NTSIRSKGQSYDSDV*STNNIMQRGTFCCT
Trigger: AGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAACACGTCCGAGTCATAACTCTGTCCTTTGCTTCTTATAGAGGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR TCA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACAGCAAAGTTTTTCTCTaGTGTTATCCTGCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHSKVFL*CYPALL
Trigger: CAGGAGGGCAGGATAACATCAGAGAAAAACTTTGCT...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTTCCAGGAGGAAGGAATaGTGCACAGAGACCAAGAAT +
Preference number: 2 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPSRRKE*CTETKN
Trigger: ATTCTTGGTCTCTGTGCAGCATTCCTTCCTCCTGGA...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTAGAGAAATGTGTCCCTaGTGTTTTGTTTTTGTTCTG +
Preference number: 2 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETREMCP*CFVFVL
Trigger: CAGAACAAAAACAAAACACCAGGGACACATTTCTCT...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACAACACTAGCAGATGTTaGGGCTCAGAAAACCCAAAG +
Preference number: 2 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHNTSRC*GSENPK
Trigger: CTTTGGGTTTTCTGAGCCCCAACATCTGCTAGTGTT...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCAGGCTTTAAGAAGGTATaGAAAGAGTCTGGGAGTGAC +
Preference number: 2 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEAGFKKV*KESGSD
Trigger: GTCACTCCCAGACTCTTTCCATACCTTCTTAAAGCC...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTATGGATTCAAACTCCTaGGCTCAAGTAATTCTCTTG +
Preference number: 2 (lower is better)
Translates to: LHFKEISLPASECRDGFFMDSNS*AQVILL
Trigger: CAAGAGAATTACTTGAGCCCAGGAGTTTGAATCCAT...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACGTCATTCAACATATATaGACACCTTCGATGTATAGG +
Preference number: 2 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHVIQHI*TPSMYR
Trigger: CCTATACATCGAAGGTGTGCATATATGTTGAATGAC...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTGTCATTCAACATATATaGACACCTTCGATGTATAGG +
Preference number: 2 (lower is better)
Translates to: LHFKEISLPASECRDGFFVIQHI*TPSMYR
Trigger: CCTATACATCGAAGGTGTGCATATATGTTGAATGAC...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTGTAGGTCATAGAAACTaGAACCATCTTTCCACAATG +
Preference number: 2 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPVGHRN*NHLSTM
Trigger: CATTGTGGAAAGATGGTTCCAGTTTCTATGACCTAC...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR GCA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTGTCATTCAACATATATaGACACCTTCGATGTATAGG +
Preference number: 2 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPVIQHI*TPSMYR
Trigger: CCTATACATCGAAGGTGTGCATATATGTTGAATGAC...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAAATGGATTCAAACTCCTaGGCTCAAGTAATTCTCTTG +
Preference number: 2 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKMDSNS*AQVILL
Trigger: CAAGAGAATTACTTGAGCCCAGGAGTTTGAATCCAT...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CAA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGTACCAGAACAACCTGTaGGTCCCAAGCATTGCTAAC +
Preference number: 3 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQYQNNL*VPSIAN
Trigger: GTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTA...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR TCA 72 bp GGAGGAAGGAATGCTGCACAGAGACCAAGAATAATCTaGACAGACAGGCCTTGCTGGGTCCCCAACCTGTGT +
Preference number: 3 (lower is better)
Translates to: GGRNAAQRPRII*TDRPCWVPNLC
Trigger: ACACAGGTTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCATTCCTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR GCA 72 bp TACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTaGACAGAGACCAAGAATAATCTGAACAGACAGGCC +
Preference number: 3 (lower is better)
Translates to: YRPCPISRRKEC*TETKNNLNRQA
Trigger: GGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR GCA 72 bp CCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATaGTGCACAGAGACCAAGAATAATCTGAACAGACAG +
Preference number: 3 (lower is better)
Translates to: PYRPCPISRRKE*CTETKNNLNRQ
Trigger: CTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CAA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCGCTCAAGTAATTCTCTaGCCTCAGCCTGGGACTACA +
Preference number: 3 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFAQVIL*PQPGTT
Trigger: TGTAGTCCCAGGCTGAGGCAAGAGAATTACTTGAGC...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CAA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAAGATTTTATGATGTGTaGACCCCGTGTTCTACAAGT +
Preference number: 3 (lower is better)
Translates to: CCTETKNNLNRQALLGPQRFYDV*TPCSTS
Trigger: ACTTGTAGAACACGGGGTCAACACATCATAAAATCT...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CAA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTGCTCAAGTAATTCTCTaGCCTCAGCCTGGGACTACA +
Preference number: 3 (lower is better)
Translates to: LHFKEISLPASECRDGFFAQVIL*PQPGTT
Trigger: TGTAGTCCCAGGCTGAGGCAAGAGAATTACTTGAGC...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CAA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACGCTCAAGTAATTCTCTaGCCTCAGCCTGGGACTACA +
Preference number: 3 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHAQVIL*PQPGTT
Trigger: TGTAGTCCCAGGCTGAGGCAAGAGAATTACTTGAGC...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR CCA 72 bp CTTGAATTCCTCTTCCCCAAGGTAGGTCATAGAAACTaGAACCATCTTTCCACAATGCCAGACTTACATCTT +
Preference number: 3 (lower is better)
Translates to: LEFLFPKVGHRN*NHLSTMPDLHL
Trigger: AAGATGTAAGTCTGGCATTGTGGAAAGATGGTTCCAGTTTCTATGACCTACCTTGGGGAAGAGGAATTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR CCA 72 bp TCAGAATGCAGAGATGGATTCTTTCCTCCCCTCACTTaGTCCCTAATTGTTCTCTTTACAACACTAGCAGAT +
Preference number: 3 (lower is better)
Translates to: SECRDGFFPPLT*SLIVLFTTLAD
Trigger: ATCTGCTAGTGTTGTAAAGAGAACAATTAGGGACCAAGTGAGGGGAGGAAAGAATCCATCTCTGCATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CAA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTAGATTTTATGATGTGTaGACCCCGTGTTCTACAAGT +
Preference number: 3 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETRFYDV*TPCSTS
Trigger: ACTTGTAGAACACGGGGTCAACACATCATAAAATCT...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CAA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACTACCAGAACAACCTGTaGGTCCCAAGCATTGCTAAC +
Preference number: 3 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHYQNNL*VPSIAN
Trigger: GTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTA...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR-3UTR CAA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGTACCAGAACAACCTGTaGGTCCCAAGCATTGCTAAC +
Preference number: 3 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMYQNNL*VPSIAN
Trigger: GTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTA...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR TCA 72 bp CCTGAGTATTCCCTATTACAGTCTTACTTCTGCTCTTaGAGACCTAATACCTCTATAAGAAGCAAAGGACAG +
Preference number: 3 (lower is better)
Translates to: PEYSLLQSYFCS*RPNTSIRSKGQ
Trigger: CTGTCCTTTGCTTCTTATAGAGGTATTAGGTCTTCAAGAGCAGAAGTAAGACTGTAATAGGGAATACTCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR CCA 72 bp CAATATGAAACAGATTTATTTACCAGAACAACCTGTTaGTCCCAAGCATTGCTAACCAGTGTACTTTCTAAG +
Preference number: 3 (lower is better)
Translates to: QYETDLFTRTTC*SQALLTSVLSK
Trigger: CTTAGAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGTTTCATATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTGCCTGGCCTTTTCCGTaGCGGAGGGCGCGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSAWPFP*RRARVS
Trigger: TGAGACTCGCGCCCTCCGGCACGGAAAAGGCCAGGC...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615299.4
CDS-3UTR CCA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGGCAAGCATGGTTTCCTaGATCTCACAGACGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQASMVS*ISQTLG
Trigger: GCCCAACGTCTGTGAGATCCAGGAAACCATGCTTGC...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR GCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAGGCAGGGTCTCAGTATaGTGCCCAGGATGGATTCAA +
Preference number: 4 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQGRVSV*CPGWIQ
Trigger: TTGAATCCATCCTGGGCAGCATACTGAGACCCTGCC...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAGTATGCTGCCCAGGATaGATTCAAACTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQVCCPG*IQTPGL
Trigger: GAGCCCAGGAGTTTGAATCCATCCTGGGCAGCATAC...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAGAATAATCTaGACAGACAGGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQRPRII*TDRPCW
Trigger: CCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCT...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGACCAGAACAACCTGTTaGTCCCAAGCATTGCTAACC +
Preference number: 4 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQTRTTC*SQALLT
Trigger: GGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGT...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAATCCAGGAGGAAGGAATaGTGCACAGAGACCAAGAAT +
Preference number: 4 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQSRRKE*CTETKN
Trigger: ATTCTTGGTCTCTGTGCAGCATTCCTTCCTCCTGGA...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAACTGGGCTGTCTGATGTaGATAGCAGCTGTTCAAGTA +
Preference number: 4 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQLGCLM*IAAVQV
Trigger: TACTTGAACAGCTGCTATCCACATCAGACAGCCCAG...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAACGGAATTTAGACTCTaGACGAATCTGCAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQTEFRL*TNLQLG
Trigger: TCCTAGCTGCAGATTCGTTCAGAGTCTAAATTCCGT...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAACATGATTGCATCTTCTaGATGGTCTTCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQHDCIF*MVFSRF
Trigger: GAACCTGGAGAAGACCATTCAGAAGATGCAATCATG...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTTTGCCTGCCTTCCCCTaGGTATTCCCTATTACAGTC +
Preference number: 4 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSLPAFP*VFPITV
Trigger: GACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAA...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAGAAGGAAAAGTAGGCTaGGAGGTAGCTTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: CCTETKNNLNRQALLGPQEGKVG*EVASKL
Trigger: CAACTTGGAAGCTACCTCTCAGCCTACTTTTCCTTC...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTGAAGGAAAAGTAGGCTaGGAGGTAGCTTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSEGKVG*EVASKL
Trigger: CAACTTGGAAGCTACCTCTCAGCCTACTTTTCCTTC...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAGTCAATGGCCATGTCTaGAAAGTAAGTAATCTGGCA +
Preference number: 4 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQVNGHV*KVSNLA
Trigger: TGCCAGATTACTTACTTTTCAGACATGGCCATTGAC...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGGGGGACATTTTGTTaGACTGACAATATGAAACAG +
Preference number: 4 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQRGTFC*TDNMKQ
Trigger: CTGTTTCATATTGTCAGTGCAACAAAATGTCCCCCT...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp GACTCGGACGTGTTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCGGGGTCTTTCCCTTCTaGCCTTACAGAGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: DSDVLSTNNIMQRGTFCCGVFPF*PYRAIC
Trigger: GCAGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCC...GCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAACACGTCCGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTTCTCTGATGTTATCCTaGCCTCCTGTCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: IISPSHTGPALYPGGRNASLMLS*PPVSAS
Trigger: TGAGGCTGAGACAGGAGGGCAGGATAACATCAGAGA...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGGTAGGTCATAGAAACTaGAACCATCTTTCCACAATG +
Preference number: 4 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQVGHRN*NHLSTM
Trigger: CATTGTGGAAAGATGGTTCCAGTTTCTATGACCTAC...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACGCGACACCTGTCGCCTaGCCTTTTCCGTGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHATPVA*PFPCRR
Trigger: CCTCCGGCACGGAAAAGGCCAGGCGACAGGTGTCGC...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615299.4
CDS-3UTR TCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGAAGGAAAAGTAGGCTaGGAGGTAGCTTCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: IISPSHTGPALYPGGRNAEGKVG*EVASKL
Trigger: CAACTTGGAAGCTACCTCTCAGCCTACTTTTCCTTC...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAAGCAAAGTTTTTCTCTaGTGTTATCCTGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CCTETKNNLNRQALLGPQSKVFL*CYPALL
Trigger: CAGGAGGGCAGGATAACATCAGAGAAAAACTTTGCT...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAATCAGAAAACCCAAAGTaGAGGCCTCAGAAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: CCTETKNNLNRQALLGPQSENPK*RPQKQS
Trigger: ACTTTGCTTCTGAGGCCTTCACTTTGGGTTTTCTGA...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTGAGGCCGACGACGCATaGACCAGCAAGGACAAGCCC +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFEADDA*TSKDKP
Trigger: GGGCTTGTCCTTGCTGGTGCATGCGTCGTCGGCCTC...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263464.9
ENST00000615299.4
CDS-3UTR GCA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTATGGTAGACAACAGGTaGTGCAAAAAGAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSMVDNR*CKKRLC
Trigger: GCAGAGTCTCTTTTTGCAGCACCTGTTGTCTACCAT...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR CCA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAAGTGGTTTGCAAGCATaGTTTCCTGGATCTCACAGA +
Preference number: 4 (lower is better)
Translates to: CCTETKNNLNRQALLGPQSGLQA*FPGSHR
Trigger: TCTGTGAGATCCAGGAAACCATGCTTGCAAACCACT...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR CCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAACGACAGAAAAGTCAATaGCCATGTCTGAAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQRQKSQ*PCLKSK
Trigger: CTTACTTTTCAGACATGGCCATTGACTTTTCTGTCG...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTCAAGTACTCACACCTTaGAAACCACTTGGCATGTTG +
Preference number: 4 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSQVLTP*KPLGML
Trigger: CAACATGCCAAGTGGTTTCCAAGGTGTGAGTACTTG...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTCTGGGCTGTCTGATGTaGATAGCAGCTGTTCAAGTA +
Preference number: 4 (lower is better)
Translates to: IISPSHTGPALYPGGRNALGCLM*IAAVQV
Trigger: TACTTGAACAGCTGCTATCCACATCAGACAGCCCAG...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTGTCAATGGCCATGTCTaGAAAGTAAGTAATCTGGCA +
Preference number: 4 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSVNGHV*KVSNLA
Trigger: TGCCAGATTACTTACTTTTCAGACATGGCCATTGAC...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAGCTAGGATTTTTCTCTaGACTGTCTGTTTTACCAGG +
Preference number: 4 (lower is better)
Translates to: CCTETKNNLNRQALLGPQARIFL*TVCFTR
Trigger: CCTGGTAAAACAGACAGTTCAGAGAAAAATCCTAGC...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTAGCAAAGTTTTTCTCTaGTGTTATCCTGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IISPSHTGPALYPGGRNASKVFL*CYPALL
Trigger: CAGGAGGGCAGGATAACATCAGAGAAAAACTTTGCT...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCAGAGGCCGACGACGCATaGACCAGCAAGGACAAGCCC +
Preference number: 4 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEAEADDA*TSKDKP
Trigger: GGGCTTGTCCTTGCTGGTGCATGCGTCGTCGGCCTC...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263464.9
ENST00000615299.4
CDS-3UTR GCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAACCATCTTTCCACAATaGCAGACTTACATCTTAAAG +
Preference number: 4 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQTIFPQ*QTYILK
Trigger: CTTTAAGATGTAAGTCTGGCATTGTGGAAAGATGGT...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp GACTCGGACGTGTTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCTCTCTGATGTTATCCTaGCCTCCTGTCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: DSDVLSTNNIMQRGTFCCSLMLS*PPVSAS
Trigger: TGAGGCTGAGACAGGAGGGCAGGATAACATCAGAGA...GCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAACACGTCCGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAATCTCCAGGTTCAAAATaGATAATTGATGACTCTGCA +
Preference number: 4 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQSPGSK*IIDDSA
Trigger: TGCAGAGTCATCAATTATCCATTTTGAACCTGGAGA...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTAACACTAGCAGATGTTaGGGCTCAGAAAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: IISPSHTGPALYPGGRNANTSRC*GSENPK
Trigger: CTTTGGGTTTTCTGAGCCCCAACATCTGCTAGTGTT...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTATCAGAATGCAGAGATaGATTCTTTCCTCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: IISPSHTGPALYPGGRNAIRMQR*ILSSPH
Trigger: GTGAGGGGAGGAAAGAATCCATCTCTGCATTCTGAT...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCCAAAGGACAGAGTTATaGCTCGGACGTGTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFQRTEL*LGRVEY
Trigger: GTACTCAACACGTCCGAGTCATAACTCTGTCCTTTG...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTTTGCCTGCCTTCCCCTaGGTATTCCCTATTACAGTC +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETLPAFP*VFPITV
Trigger: GACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAA...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp GACTCGGACGTGTTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCCATGGTGGAAAGCTCTaGTGTCAAGTGTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: DSDVLSTNNIMQRGTFCCHGGKL*CQVFHS
Trigger: GCTGTGAAACACTTGACAGCAGAGCTTTCCACCATG...GCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAACACGTCCGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR CCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTTTTTGCCAGATCTGTTaGCGACAGAAAAGTCAATGG +
Preference number: 4 (lower is better)
Translates to: IISPSHTGPALYPGGRNAFCQIC*RQKSQW
Trigger: CCATTGACTTTTCTGTCGCCAACAGATCTGGCAAAA...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTATGGATTCAAACTCCTaGGCTCAAGTAATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSMDSNS*AQVILL
Trigger: CAAGAGAATTACTTGAGCCCAGGAGTTTGAATCCAT...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAATGGATTCAAACTCCTaGGCTCAAGTAATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: CCTETKNNLNRQALLGPQMDSNS*AQVILL
Trigger: CAAGAGAATTACTTGAGCCCAGGAGTTTGAATCCAT...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTCCTTCTTCCAATAGGTaGGGCTGGCATGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETPSSNR*GWHETS
Trigger: AGAAGTCTCATGCCAGCCCCACCTATTGGAAGAAGG...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp GACTCGGACGTGTTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACGGAATTTAGACTCTaGACGAATCTGCAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: DSDVLSTNNIMQRGTFCCTEFRL*TNLQLG
Trigger: TCCTAGCTGCAGATTCGTTCAGAGTCTAAATTCCGT...GCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAACACGTCCGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCATGTCTCAGGTGTTCTaGCATAGCATTATCCTTCGG +
Preference number: 4 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFMSQVF*HSIILR
Trigger: CCGAAGGATAATGCTATGTCAGAACACCTGAGACAT...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTAGACCAAGAATAATCTaGACAGACAGGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETRPRII*TDRPCW
Trigger: CCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCT...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCGGCAGGGTCTCAGTATaGTGCCCAGGATGGATTCAA +
Preference number: 4 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFGRVSV*CPGWIQ
Trigger: TTGAATCCATCCTGGGCAGCATACTGAGACCCTGCC...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACGGGGTCTTTCCCTTCTaGCCTTACAGAGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHGVFPF*PYRAIC
Trigger: GCAGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCC...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGGGGGTCTTTCCCTTCTaGCCTTACAGAGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMGVFPF*PYRAIC
Trigger: GCAGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCC...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAATGGTGCAAAAAGGGTaGCTACTATTTAAATACCCT +
Preference number: 4 (lower is better)
Translates to: CCTETKNNLNRQALLGPQMVQKG*LLFKYP
Trigger: AGGGTATTTAAATAGTAGGCACCCTTTTTGCACCAT...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTCTGGGCTGTCTGATGTaGATAGCAGCTGTTCAAGTA +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETLGCLM*IAAVQV
Trigger: TACTTGAACAGCTGCTATCCACATCAGACAGCCCAG...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAATCTCCAGGTTCAAAATaGATAATTGATGACTCTGCA +
Preference number: 4 (lower is better)
Translates to: CCTETKNNLNRQALLGPQSPGSK*IIDDSA
Trigger: TGCAGAGTCATCAATTATCCATTTTGAACCTGGAGA...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCGGCTTTAAGAAGGTATaGAAAGAGTCTGGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFGFKKV*KESGSD
Trigger: GTCACTCCCAGACTCTTTCCATACCTTCTTAAAGCC...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp GACTCGGACGTGTTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCATCAGAATGCAGAGATaGATTCTTTCCTCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: DSDVLSTNNIMQRGTFCCIRMQR*ILSSPH
Trigger: GTGAGGGGAGGAAAGAATCCATCTCTGCATTCTGAT...GCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAACACGTCCGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTCATGATTGCATCTTCTaGATGGTCTTCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETHDCIF*MVFSRF
Trigger: GAACCTGGAGAAGACCATTCAGAAGATGCAATCATG...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp GACTCGGACGTGTTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCCTTGCAGAGAGTTTCTaGATACAGTGGCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: DSDVLSTNNIMQRGTFCCLAESF*IQWLQY
Trigger: ATATTGCAGCCACTGTATTCAGAAACTCTCTGCAAG...GCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAACACGTCCGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACCAGCCTCATTCTCCCTaGAGGCAAGCCACAGAAACT +
Preference number: 4 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHQPHSP*RQATET
Trigger: AGTTTCTGTGGCTTGCCTTCAGGGAGAATGAGGCTG...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTCAGCCTCATTCTCCCTaGAGGCAAGCCACAGAAACT +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFQPHSP*RQATET
Trigger: AGTTTCTGTGGCTTGCCTTCAGGGAGAATGAGGCTG...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTAACTGCAGACTTCAATaGTTTGTTTCCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETNCRLQ*FVSRWQ
Trigger: CTGCCACCTGGAAACAAAGCATTGAAGTCTGCAGTT...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR GCA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTCAAATGTTGAAAAAGTaGCATTCTATTCTTCCGGAT +
Preference number: 4 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSQMLKK*HSILPD
Trigger: ATCCGGAAGAATAGAATGGCACTTTTTCAACATTTG...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGTCATTCAACATATATaGACACCTTCGATGTATAGG +
Preference number: 4 (lower is better)
Translates to: IISPSHTGPALYPGGRNAVIQHI*TPSMYR
Trigger: CCTATACATCGAAGGTGTGCATATATGTTGAATGAC...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTACCATCTTTCCACAATaGCAGACTTACATCTTAAAG +
Preference number: 4 (lower is better)
Translates to: IISPSHTGPALYPGGRNATIFPQ*QTYILK
Trigger: CTTTAAGATGTAAGTCTGGCATTGTGGAAAGATGGT...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTAATCTTGATTTGCTCTaGAGTTTACAGGATTTGATG +
Preference number: 4 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSNLDLL*SLQDLM
Trigger: CATCAAATCCTGTAAACTCCAGAGCAAATCAAGATT...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCTTTTGCCAGATCTGTTaGCGACAGAAAAGTCAATGG +
Preference number: 4 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFFCQIC*RQKSQW
Trigger: CCATTGACTTTTCTGTCGCCAACAGATCTGGCAAAA...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTCAAGTACTCACACCTTaGAAACCACTTGGCATGTTG +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETQVLTP*KPLGML
Trigger: CAACATGCCAAGTGGTTTCCAAGGTGTGAGTACTTG...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACGTATGCTGCCCAGGATaGATTCAAACTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHVCCPG*IQTPGL
Trigger: GAGCCCAGGAGTTTGAATCCATCCTGGGCAGCATAC...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTGGCTTTAAGAAGGTATaGAAAGAGTCTGGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETGFKKV*KESGSD
Trigger: GTCACTCCCAGACTCTTTCCATACCTTCTTAAAGCC...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCTTTCCTCCCCTCACTTaGTCCCTAATTGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFFPPLT*SLIVLF
Trigger: AAAGAGAACAATTAGGGACCAAGTGAGGGGAGGAAA...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTGTCAATGGCCATGTCTaGAAAGTAAGTAATCTGGCA +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETVNGHV*KVSNLA
Trigger: TGCCAGATTACTTACTTTTCAGACATGGCCATTGAC...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTCTTGCAGAGAGTTTCTaGATACAGTGGCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETLAESF*IQWLQY
Trigger: ATATTGCAGCCACTGTATTCAGAAACTCTCTGCAAG...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACAAAGGACAGAGTTATaGCTCGGACGTGTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVQRTEL*LGRVEY
Trigger: GTACTCAACACGTCCGAGTCATAACTCTGTCCTTTG...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTTTGCCTGCCTTCCCCTaGGTATTCCCTATTACAGTC +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFLPAFP*VFPITV
Trigger: GACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAA...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCACAGCCTCATTCTCCCTaGAGGCAAGCCACAGAAACT +
Preference number: 4 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEAQPHSP*RQATET
Trigger: AGTTTCTGTGGCTTGCCTTCAGGGAGAATGAGGCTG...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTGTGCCAGTAGGAGACTaGCTGGCCAACTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFVPVGD*LANSEK
Trigger: TTTTTCAGAGTTGGCCAGGCAGTCTCCTACTGGCAC...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR GCA 90 bp GACTCGGACGTGTTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCAGGGAGGTAGTTTTGTaGATGGCTTTGCTTTTATCA +
Preference number: 4 (lower is better)
Translates to: DSDVLSTNNIMQRGTFCCREVVL*MALLLS
Trigger: TGATAAAAGCAAAGCCATGCACAAAACTACCTCCCT...GCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAACACGTCCGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR GCA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCGTAAAAGCCTGCTTTTaGCAGATCTGTTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFVKACF*QICWRQ
Trigger: CTGTCGCCAACAGATCTGGCAAAAGCAGGCTTTTAC...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTAGTAAAAGCCTGCTTTTaGCAGATCTGTTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVVKACF*QICWRQ
Trigger: CTGTCGCCAACAGATCTGGCAAAAGCAGGCTTTTAC...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCTATGTAGTAAAAGCCTaGTTTTGCCAGATCTGTTGG +
Preference number: 4 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFYVVKA*FCQICW
Trigger: CCAACAGATCTGGCAAAAGCAGGCTTTTACTACATA...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTATGTTTTAAAGCGGGCTaGATGTGTCTGCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVCFKAG*MCLHAQ
Trigger: CTGAGCATGCAGACACATGCAGCCCGCTTTAAAACA...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTCAAATGTTGAAAAAGTaGCATTCTATTCTTCCGGAT +
Preference number: 4 (lower is better)
Translates to: IISPSHTGPALYPGGRNAQMLKK*HSILPD
Trigger: ATCCGGAAGAATAGAATGGCACTTTTTCAACATTTG...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCAGGGTCTCAGTATGCTaGCCAGGATGGATTCAAACT +
Preference number: 4 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFRVSVC*PGWIQT
Trigger: AGTTTGAATCCATCCTGGGCAGCATACTGAGACCCT...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTATCCAGGAGGAAGGAATaGTGCACAGAGACCAAGAAT +
Preference number: 4 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVSRRKE*CTETKN
Trigger: ATTCTTGGTCTCTGTGCAGCATTCCTTCCTCCTGGA...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGAAGTAATGAGTGTGTaGAATTTGTTACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: IISPSHTGPALYPGGRNAEVMSV*NLLLKK
Trigger: CTTCTTCAGTAACAAATTCCACACACTCATTACTTC...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGCCTTCTTCCAATAGGTaGGGCTGGCATGAGACTTCT +
Preference number: 4 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMPSSNR*GWHETS
Trigger: AGAAGTCTCATGCCAGCCCCACCTATTGGAAGAAGG...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTTTTCCTCCCCTCACTTaGTCCCTAATTGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETFPPLT*SLIVLF
Trigger: AAAGAGAACAATTAGGGACCAAGTGAGGGGAGGAAA...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTAATGTCTCAGGTGTTCTaGCATAGCATTATCCTTCGG +
Preference number: 4 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVMSQVF*HSIILR
Trigger: CCGAAGGATAATGCTATGTCAGAACACCTGAGACAT...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCTCAGAAAACCCAAAGTaGAGGCCTCAGAAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFSENPK*RPQKQS
Trigger: ACTTTGCTTCTGAGGCCTTCACTTTGGGTTTTCTGA...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGGTAGACAACAGGTGCTaGAAAAAGAGACTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMVDNRC*KKRLCP
Trigger: TGGGCAGAGTCTCTTTTTGCAGCACCTGTTGTCTAC...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR GCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGAGGGTCTCAGTATGCTaGCCAGGATGGATTCAAACT +
Preference number: 4 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMRVSVC*PGWIQT
Trigger: AGTTTGAATCCATCCTGGGCAGCATACTGAGACCCT...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAAGGCAGGGTCTCAGTATaGTGCCCAGGATGGATTCAA +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKGRVSV*CPGWIQ
Trigger: TTGAATCCATCCTGGGCAGCATACTGAGACCCTGCC...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp GACTCGGACGTGTTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCGTCATTCAACATATATaGACACCTTCGATGTATAGG +
Preference number: 4 (lower is better)
Translates to: DSDVLSTNNIMQRGTFCCVIQHI*TPSMYR
Trigger: CCTATACATCGAAGGTGTGCATATATGTTGAATGAC...GCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAACACGTCCGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCCAAGTACTCACACCTTaGAAACCACTTGGCATGTTG +
Preference number: 4 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFQVLTP*KPLGML
Trigger: CAACATGCCAAGTGGTTTCCAAGGTGTGAGTACTTG...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTAAACACTAGCAGATGTTaGGGCTCAGAAAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVNTSRC*GSENPK
Trigger: CTTTGGGTTTTCTGAGCCCCAACATCTGCTAGTGTT...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTAATCAGAATGCAGAGATaGATTCTTTCCTCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVIRMQR*ILSSPH
Trigger: GTGAGGGGAGGAAAGAATCCATCTCTGCATTCTGAT...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
3UTR CAA 72 bp ATAAGAAGCAAAGGACAGAGTTATGACTCGGACGTGTaGAGTACCAATAACATAATGCAGAGGGGGACATTT +
Preference number: 4 (lower is better)
Translates to: IRSKGQSYDSDV*STNNIMQRGTF
Trigger: AAATGTCCCCCTCTGCATTATGTTATTGGTACTCAACACGTCCGAGTCATAACTCTGTCCTTTGCTTCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCTCGGTACAGTTCACATaGCAAGTCGTATTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFSVQFT*QVVFQF
Trigger: GAACTGAAATACGACTTGTCATGTGAACTGTACCGA...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTCATGATTGCATCTTCTaGATGGTCTTCTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFHDCIF*MVFSRF
Trigger: GAACCTGGAGAAGACCATTCAGAAGATGCAATCATG...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCGATTTTATGATGTGTTaGCCCCGTGTTCTACAAGTG +
Preference number: 4 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFDFMMC*PRVLQV
Trigger: CACTTGTAGAACACGGGGTCAACACATCATAAAATC...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAGACCAAGAATAATCTaGACAGACAGGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPRPRII*TDRPCW
Trigger: CCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCT...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTAGCAAAGTTTTTCTCTaGTGTTATCCTGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFSKVFL*CYPALL
Trigger: CAGGAGGGCAGGATAACATCAGAGAAAAACTTTGCT...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCATGTTTTAAAGCGGGCTaGATGTGTCTGCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEACFKAG*MCLHAQ
Trigger: CTGAGCATGCAGACACATGCAGCCCGCTTTAAAACA...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp GACTCGGACGTGTTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCCAAATGTTGAAAAAGTaGCATTCTATTCTTCCGGAT +
Preference number: 4 (lower is better)
Translates to: DSDVLSTNNIMQRGTFCCQMLKK*HSILPD
Trigger: ATCCGGAAGAATAGAATGGCACTTTTTCAACATTTG...GCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAACACGTCCGAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCATCCAGGAGGAAGGAATaGTGCACAGAGACCAAGAAT +
Preference number: 4 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEASRRKE*CTETKN
Trigger: ATTCTTGGTCTCTGTGCAGCATTCCTTCCTCCTGGA...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTGTTCATTTGGTCTTTTaGACTCAGTTTCATGCTGTT +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETVHLVF*TQFHAV
Trigger: AACAGCATGAAACTGAGTCCAAAAGACCAAATGAAC...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR CCA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCAATCTTGATTTGCTCTaGAGTTTACAGGATTTGATG +
Preference number: 4 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFNLDLL*SLQDLM
Trigger: CATCAAATCCTGTAAACTCCAGAGCAAATCAAGATT...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGGTAATGTGTGACTCATaGAGCTTCTTTTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMVMCDS*SFFSWW
Trigger: CCACCATGAAAAGAAGCTTCATGAGTCACACATTAC...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR TCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGTCGGTACAGTTCACATaGCAAGTCGTATTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMSVQFT*QVVFQF
Trigger: GAACTGAAATACGACTTGTCATGTGAACTGTACCGA...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTTCGGTACAGTTCACATaGCAAGTCGTATTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFSVQFT*QVVFQF
Trigger: GAACTGAAATACGACTTGTCATGTGAACTGTACCGA...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGGCTAGGATTTTTCTCTaGACTGTCTGTTTTACCAGG +
Preference number: 4 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMARIFL*TVCFTR
Trigger: CCTGGTAAAACAGACAGTTCAGAGAAAAATCCTAGC...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAAGTAAAAGCCTGCTTTTaGCAGATCTGTTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKVKACF*QICWRQ
Trigger: CTGTCGCCAACAGATCTGGCAAAAGCAGGCTTTTAC...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCAAGGAGCACAATCTTTaGATACTACTAGATGACCAC +
Preference number: 4 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFKEHNL*ILLDDH
Trigger: GTGGTCATCTAGTAGTATGCAAAGATTGTGCTCCTT...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTAAGGGGGACATTTTGTTaGACTGACAATATGAAACAG +
Preference number: 4 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVRGTFC*TDNMKQ
Trigger: CTGTTTCATATTGTCAGTGCAACAAAATGTCCCCCT...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTAGCTTCTTTTCATGGTaGAAAGCTCTGCTGTCAAGT +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFSFFSW*KALLSS
Trigger: ACTTGACAGCAGAGCTTTCCACCATGAAAAGAAGCT...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR CCA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTGAAGTAATGAGTGTGTaGAATTTGTTACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETEVMSV*NLLLKK
Trigger: CTTCTTCAGTAACAAATTCCACACACTCATTACTTC...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTAATGGATAGCATACCTTaGACCAGAATTTATCATGAC +
Preference number: 4 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVMDSIP*TRIYHD
Trigger: GTCATGATAAATTCTGGTTCAAGGTATGCTATCCAT...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR TCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAAATGTCTCAGGTGTTCTaGCATAGCATTATCCTTCGG +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKMSQVF*HSIILR
Trigger: CCGAAGGATAATGCTATGTCAGAACACCTGAGACAT...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCAGCTAGGATTTTTCTCTaGACTGTCTGTTTTACCAGG +
Preference number: 4 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEAARIFL*TVCFTR
Trigger: CCTGGTAAAACAGACAGTTCAGAGAAAAATCCTAGC...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTGATTTTATGATGTGTTaGCCCCGTGTTCTACAAGTG +
Preference number: 4 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPDFMMC*PRVLQV
Trigger: CACTTGTAGAACACGGGGTCAACACATCATAAAATC...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAATCAGAAAACCCAAAGTaGAGGCCTCAGAAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKSENPK*RPQKQS
Trigger: ACTTTGCTTCTGAGGCCTTCACTTTGGGTTTTCTGA...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTGTTGGGCTTTTCAACTaGAGACTTCAATGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFVGLFN*RLQCFV
Trigger: AACAAAGCATTGAAGTCTGCAGTTGAAAAGCCCAAC...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR GCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGTATGTAGTAAAAGCCTaGTTTTGCCAGATCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMYVVKA*FCQICW
Trigger: CCAACAGATCTGGCAAAAGCAGGCTTTTACTACATA...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGAAGGAGCACAATCTTTaGATACTACTAGATGACCAC +
Preference number: 4 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMKEHNL*ILLDDH
Trigger: GTGGTCATCTAGTAGTATGCAAAGATTGTGCTCCTT...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCGTCATTCAACATATATaGACACCTTCGATGTATAGG +
Preference number: 4 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFVIQHI*TPSMYR
Trigger: CCTATACATCGAAGGTGTGCATATATGTTGAATGAC...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACAGGGGGACATTTTGTTaGACTGACAATATGAAACAG +
Preference number: 4 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHRGTFC*TDNMKQ
Trigger: CTGTTTCATATTGTCAGTGCAACAAAATGTCCCCCT...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCTCAGTTCAAACGTGTTaGCGCTTTTCATCAAATTTG +
Preference number: 4 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFSVQTC*RFSSNL
Trigger: CAAATTTGATGAAAAGCGCCAACACGTTTGAACTGA...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTGTAGGTCATAGAAACTaGAACCATCTTTCCACAATG +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFVGHRN*NHLSTM
Trigger: CATTGTGGAAAGATGGTTCCAGTTTCTATGACCTAC...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAAAACACTAGCAGATGTTaGGGCTCAGAAAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKNTSRC*GSENPK
Trigger: CTTTGGGTTTTCTGAGCCCCAACATCTGCTAGTGTT...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTTCAGTTTCATGCTGTTaGAGCAACTCAATGTTAAGT +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFSVSCC*SNSMLS
Trigger: ACTTAACATTGAGTTGCTTCAACAGCATGAAACTGA...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR TCA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACCAAAGATGTAATGTGTaGCTCATGAAGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHQRCNV*LMKLLF
Trigger: GAAAAGAAGCTTCATGAGTCACACATTACATCTTTG...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR TCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGCAGAGTAAGCTGTGTTaGAAATTAAAACCCTTCACA +
Preference number: 4 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMQSKLC*KLKPFT
Trigger: TGTGAAGGGTTTTAATTTTCAACACAGCTTACTCTG...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR TCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAACTTGCAGAGAGTTTCTaGATACAGTGGCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKLAESF*IQWLQY
Trigger: ATATTGCAGCCACTGTATTCAGAAACTCTCTGCAAG...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAAGATTTTATGATGTGTTaGCCCCGTGTTCTACAAGTG +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKDFMMC*PRVLQV
Trigger: CACTTGTAGAACACGGGGTCAACACATCATAAAATC...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGTCTTACTTCTGCTCTTaGAGACCTAATACCTCTATA +
Preference number: 4 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMSYFCS*RPNTSI
Trigger: TATAGAGGTATTAGGTCTTCAAGAGCAGAAGTAAGA...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACTCTTACTTCTGCTCTTaGAGACCTAATACCTCTATA +
Preference number: 4 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHSYFCS*RPNTSI
Trigger: TATAGAGGTATTAGGTCTTCAAGAGCAGAAGTAAGA...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAAATTAAGCCATCAGGATaGCATTTAATGGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKIKPSG*HLMAGI
Trigger: GATGCCTGCCATTAAATGGCATCCTGATGGCTTAAT...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR GCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTACCATCTTTCCACAATaGCAGACTTACATCTTAAAG +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFTIFPQ*QTYILK
Trigger: CTTTAAGATGTAAGTCTGGCATTGTGGAAAGATGGT...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTAATGTGTTTGTTCATTTaGTCTTTTGGACTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVMCLFI*SFGLSF
Trigger: GAAACTGAGTCCAAAAGACCAAATGAACAAACACAT...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR CCA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACACTAGAATGTTTCAGTaGCATTCAATCAACCCAAAG +
Preference number: 4 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHTRMFQ*HSINPK
Trigger: CTTTGGGTTGATTGAATGCCACTGAAACATTCTAGT...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR CCA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACTCAGTTCAAACGTGTTaGCGCTTTTCATCAAATTTG +
Preference number: 4 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHSVQTC*RFSSNL
Trigger: CAAATTTGATGAAAAGCGCCAACACGTTTGAACTGA...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCACGACAGAAAAGTCAATaGCCATGTCTGAAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEARQKSQ*PCLKSK
Trigger: CTTACTTTTCAGACATGGCCATTGACTTTTCTGTCG...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTCGACAGAAAAGTCAATaGCCATGTCTGAAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPRQKSQ*PCLKSK
Trigger: CTTACTTTTCAGACATGGCCATTGACTTTTCTGTCG...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAATTTTGCCAGATCTGTTaGCGACAGAAAAGTCAATGG +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKFCQIC*RQKSQW
Trigger: CCATTGACTTTTCTGTCGCCAACAGATCTGGCAAAA...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGAGAGAAATGTGTCCCTaGTGTTTTGTTTTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMREMCP*CFVFVL
Trigger: CAGAACAAAAACAAAACACCAGGGACACATTTCTCT...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCAGTAGGTCATAGAAACTaGAACCATCTTTCCACAATG +
Preference number: 4 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEAVGHRN*NHLSTM
Trigger: CATTGTGGAAAGATGGTTCCAGTTTCTATGACCTAC...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAATTTCCTCCCCTCACTTaGTCCCTAATTGTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKFPPLT*SLIVLF
Trigger: AAAGAGAACAATTAGGGACCAAGTGAGGGGAGGAAA...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCATCTTACTTCTGCTCTTaGAGACCTAATACCTCTATA +
Preference number: 4 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEASYFCS*RPNTSI
Trigger: TATAGAGGTATTAGGTCTTCAAGAGCAGAAGTAAGA...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR GCA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCAATGGTGCAAAAAGGGTaGCTACTATTTAAATACCCT +
Preference number: 4 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEAMVQKG*LLFKYP
Trigger: AGGGTATTTAAATAGTAGGCACCCTTTTTGCACCAT...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTGAAGTAATGAGTGTGTaGAATTTGTTACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LHFKEISLPASECRDGFFEVMSV*NLLLKK
Trigger: CTTCTTCAGTAACAAATTCCACACACTCATTACTTC...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCATCTCCAGGTTCAAAATaGATAATTGATGACTCTGCA +
Preference number: 4 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEASPGSK*IIDDSA
Trigger: TGCAGAGTCATCAATTATCCATTTTGAACCTGGAGA...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR TCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAAGCTTTTTGGAAATTGTaGAATTTAGTGGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKAFWKL*NLVARK
Trigger: TTTCCTGGCCACTAAATTTCACAATTTCCAAAAAGC...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR CCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAATCAGTTCAAACGTGTTaGCGCTTTTCATCAAATTTG +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKSVQTC*RFSSNL
Trigger: CAAATTTGATGAAAAGCGCCAACACGTTTGAACTGA...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CCA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAAAATCTTGATTTGCTCTaGAGTTTACAGGATTTGATG +
Preference number: 4 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKNLDLL*SLQDLM
Trigger: CATCAAATCCTGTAAACTCCAGAGCAAATCAAGATT...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
34% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS GCA 90 bp CGAGGCTCGAGGCATGAGAATTGCCTGAACCCAAGAGGCGGAGGTTaGAGTGAGCTGACATCACACCATCGCACTCCAATCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: RGSRHENCLNPRGGG*SELTSHHRTPIWAT
Trigger: TGTTGCCCAGATTGGAGTGCGATGGTGTGATGTCAGCTCACTGCAACCTCCGCCTCTTGGGTTCAGGCAATTCTCATGCCTCGAGCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673846.1
CDS GCA 90 bp TGTGGAAATTTAGGCAACAACTGCTGCCCAGAGGCCGACGACGCATaGACCAGCAAGGACAAGCCCAGTCTTTTCAAGCGACACCTGTCG +
Preference number: 5 (lower is better)
Translates to: CGNLGNNCCPEADDA*TSKDKPSLFKRHLS
Trigger: CGACAGGTGTCGCTTGAAAAGACTGGGCTTGTCCTTGCTGGTGCATGCGTCGTCGGCCTCTGGGCAGCAGTTGTTGCCTAAATTTCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526421.6
ENST00000528940.1
CDS GCA 90 bp TTTGACATCATCACTGTTACCTGCTGCCCAGAGGCCGACGACGCATaGACCAGCAAGGACAAGCCCAGTCTTTTCAAGCGACACCTGTCG +
Preference number: 5 (lower is better)
Translates to: FDIITVTCCPEADDA*TSKDKPSLFKRHLS
Trigger: CGACAGGTGTCGCTTGAAAAGACTGGGCTTGTCCTTGCTGGTGCATGCGTCGTCGGCCTCTGGGCAGCAGGTAACAGTGATGATGTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527309.2
CDS-3UTR CAA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAGCAAGCCACAGAAACTaGAATTCCTCTTCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: CCTETKNNLNRQALLGPQASHRN*NSSSPR
Trigger: CCTTGGGGAAGAGGAATTCAAGTTTCTGTGGCTTGC...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGTCTATAAATGGGCATTaGGGAAAATGTCTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: SPSHTGPALYPGGRNAAQSINGH*GKCLRC
Trigger: ACACCTGAGACATTTTCCCAAATGCCCATTTATAGA...CTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAATGAGGGTAACTGGCTaGAACTTGACGGATGAACTC +
Preference number: 5 (lower is better)
Translates to: CCTETKNNLNRQALLGPQMRVTG*NLTDEL
Trigger: GAGTTCATCCGTCAAGTTCAAGCCAGTTACCCTCAT...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTCTTTCCTCCCCTCACTaGGTCCCTAATTGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSLSSPH*VPNCSL
Trigger: AAGAGAACAATTAGGGACCAAGTGAGGGGAGGAAAG...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAGATTTGATGGAGAGTTaGAATAAGAGCCACGGAAAT +
Preference number: 5 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQDLMES*NKSHGN
Trigger: ATTTCCGTGGCTCTTATTCAAACTCTCCATCAAATC...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAATCTATAAATGGGCATTaGGGAAAATGTCTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQSINGH*GKCLRC
Trigger: ACACCTGAGACATTTTCCCAAATGCCCATTTATAGA...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTTCAAGTACTCACACCTaGGAAACCACTTGGCATGTT +
Preference number: 5 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSSSTHT*ETTWHV
Trigger: AACATGCCAAGTGGTTTCCAAGGTGTGAGTACTTGA...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAACACAGCTTCAGCTTCTaGCAGAGAGTTTCTGAATAC +
Preference number: 5 (lower is better)
Translates to: CCTETKNNLNRQALLGPQHSFSF*QRVSEY
Trigger: GTATTCAGAAACTCTCTGCAAGAAGCTGAAGCTGTG...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAAGTACGAACTGTACCCTaGATTGTACTCCTACAAATA +
Preference number: 5 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQVRTVP*IVLLQI
Trigger: TATTTGTAGGAGTACAATCAAGGGTACAGTTCGTAC...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAATATGACTCGGACGTGTaGAGTACCAATAACATAATG +
Preference number: 5 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQYDSDV*STNNIM
Trigger: CATTATGTTATTGGTACTCAACACGTCCGAGTCATA...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp CCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTGCACAGAGACCAACAGAAAAATCTTGATTaGCTCTGGAGTTTACAGGAT +
Preference number: 5 (lower is better)
Translates to: PIQALPYIQEEGMLHRDQQKNLD*LWSLQD
Trigger: ATCCTGTAAACTCCAGAGCAAATCAAGATTTTTCTG...TTGGTCTCTGTGCAGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TGCTGCACAGAGACCAAGAATAATCTGAACAGACAGGCCTTGCTGGGTCCCCAAGATTTGATGGAGAGTTaGAATAAGAGCCACGGAAAT +
Preference number: 5 (lower is better)
Translates to: CCTETKNNLNRQALLGPQDLMES*NKSHGN
Trigger: ATTTCCGTGGCTCTTATTCAAACTCTCCATCAAATC...TTGGGGACCCAGCAAGGCCTGTCTGTTCAGATTATTCTTGGTCTCTGTGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTCAAGGCAGAAAAATCTaGATTTGCTCTGGAGTTTAC +
Preference number: 5 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSQGRKI*ICSGVY
Trigger: GTAAACTCCAGAGCAAATCAAGATTTTTCTGCCTTG...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTTCTATAAATGGGCATTaGGGAAAATGTCTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSSINGH*GKCLRC
Trigger: ACACCTGAGACATTTTCCCAAATGCCCATTTATAGA...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCATGAGGGTAACTGGCTaGAACTTGACGGATGAACTC +
Preference number: 5 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFMRVTG*NLTDEL
Trigger: GAGTTCATCCGTCAAGTTCAAGCCAGTTACCCTCAT...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TCAGCTGTGACCCTTATGAAGGGGTCTTTCCCTTCTGCCCTTACAGAGCCATCTTATGACTCGGACGTGTaGAGTACCAATAACATAATG +
Preference number: 5 (lower is better)
Translates to: SAVTLMKGSFPSALTEPSYDSDV*STNNIM
Trigger: CATTATGTTATTGGTACTCAACACGTCCGAGTCATA...AGATGGCTCTGTAAGGGCAGAAGGGAAAGACCCCTTCATAAGGGTCACAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS GCA 90 bp TTCCTGGATCTCACAGACGTTGGGCTTTTCAACTGCAGACTTCAATaGTTTGTTTCCAGGTGGCAGGAGAAACATCACATCTCATTACCA +
Preference number: 5 (lower is better)
Translates to: FLDLTDVGLFNCRLQ*FVSRWQEKHHISLP
Trigger: TGGTAATGAGATGTGATGTTTCTCCTGCCACCTGGAAACAAAGCATTGAAGTCTGCAGTTGAAAAGCCCAACGTCTGTGAGATCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000673846.1
CDS-3UTR CAA 90 bp ATAATATCCCCATCCCATACAGGCCCTGCCCTATATCCAGGAGGAAGGAATGCTAGATTTTATGATGTGTaGACCCCGTGTTCTACAAGT +
Preference number: 5 (lower is better)
Translates to: IISPSHTGPALYPGGRNARFYDV*TPCSTS
Trigger: ACTTGTAGAACACGGGGTCAACACATCATAAAATCT...AGCATTCCTTCCTCCTGGATATAGGGCAGGGCCTGTATGGGATGGGGATATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCGCAGACTTCAATGCTTaGTTTCCAGGTGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFADFNA*FPGGRR
Trigger: TCTCCTGCCACCTGGAAACAAAGCATTGAAGTCTGC...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR CAA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTTCAAGTACTCACACCTaGGAAACCACTTGGCATGTT +
Preference number: 5 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETSSTHT*ETTWHV
Trigger: AACATGCCAAGTGGTTTCCAAGGTGTGAGTACTTGA...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCGCAAGCCACAGAAACTaGAATTCCTCTTCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFASHRN*NSSSPR
Trigger: CCTTGGGGAAGAGGAATTCAAGTTTCTGTGGCTTGC...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS TCA 90 bp CCCAGCAGGAAAAGTGGAATACGTAGACATTCGGTACAGTTCACATaGCAAGTCGTATTTCAGTTCAAACGTGTTGGCGCTTTTCATCAA +
Preference number: 5 (lower is better)
Translates to: PSRKSGIRRHSVQFT*QVVFQFKRVGAFHQ
Trigger: TTGATGAAAAGCGCCAACACGTTTGAACTGAAATACGACTTGTCATGTGAACTGTACCGAATGTCTACGTATTCCACTTTTCCTGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000532808.5
ENST00000615299.4
ENST00000673846.1
CDS GCA 90 bp ATTAAAACCCTTCACAGAAGAGTGATGTGTATTAAGCCATCAGGATaGCATTTAATGGCAGGCATCTCCACAGGTAGGTCAACTTCTCCA +
Preference number: 5 (lower is better)
Translates to: IKTLHRRVMCIKPSG*HLMAGISTGRSTSP
Trigger: TGGAGAAGTTGACCTACCTGTGGAGATGCCTGCCATTAAATGGCATCCTGATGGCTTAATACACATCACTCTTCTGTGAAGGGTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000673846.1
CDS-3UTR CAA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACTGGATCTCACAGACGTaGGGCTTTTCAACTGCAGAC +
Preference number: 5 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHWISQT*GFSTAD
Trigger: GTCTGCAGTTGAAAAGCCCAACGTCTGTGAGATCCA...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR CAA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTAAGTAAAAGCCTGCTTTaGCCAGATCTGTTGGCGACA +
Preference number: 5 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVSKSLL*PDLLAT
Trigger: TGTCGCCAACAGATCTGGCAAAAGCAGGCTTTTACT...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACGTAACTGGCTTGAACTaGACGGATGAACTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHVTGLN*TDELLS
Trigger: GGACAGGAGTTCATCCGTCAAGTTCAAGCCAGTTAC...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGGCTCAAGTAATTCTCTaGCCTCAGCCTGGGACTACA +
Preference number: 5 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMAQVIL*PQPGTT
Trigger: TGTAGTCCCAGGCTGAGGCAAGAGAATTACTTGAGC...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTGATTTGATGGAGAGTTaGAATAAGAGCCACGGAAAT +
Preference number: 5 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETDLMES*NKSHGN
Trigger: ATTTCCGTGGCTCTTATTCAAACTCTCCATCAAATC...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCTGGAGTTTACAGGATTaGATGGAGAGTTTGAATAAG +
Preference number: 5 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFWSLQD*MESLNK
Trigger: CTTATTCAAACTCTCCATCAAATCCTGTAAACTCCA...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp ATGACTAGCCTTTGCCTGCCTTCCCCTGAGTATTCCCTATTACAGTCTTACTTCCAGAAAAATCTTGATTaGCTCTGGAGTTTACAGGAT +
Preference number: 5 (lower is better)
Translates to: MTSLCLPSPEYSLLQSYFQKNLD*LWSLQD
Trigger: ATCCTGTAAACTCCAGAGCAAATCAAGATTTTTCTG...GAAGTAAGACTGTAATAGGGAATACTCAGGGGAAGGCAGGCAAAGGCTAGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTTGCCAGATCTGTaGGCGACAGAAAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVLLPDL*ATEKSM
Trigger: CATTGACTTTTCTGTCGCCAACAGATCTGGCAAAAG...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTAGTAAAAGCCTGCTTTaGCCAGATCTGTTGGCGACA +
Preference number: 5 (lower is better)
Translates to: LHFKEISLPASECRDGFFSKSLL*PDLLAT
Trigger: TGTCGCCAACAGATCTGGCAAAAGCAGGCTTTTACT...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCAGTAACTGGCTTGAACTaGACGGATGAACTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEAVTGLN*TDELLS
Trigger: GGACAGGAGTTCATCCGTCAAGTTCAAGCCAGTTAC...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTGCTCAAGTAATTCTCTaGCCTCAGCCTGGGACTACA +
Preference number: 5 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPAQVIL*PQPGTT
Trigger: TGTAGTCCCAGGCTGAGGCAAGAGAATTACTTGAGC...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTTACCAGAACAACCTGTaGGTCCCAAGCATTGCTAAC +
Preference number: 5 (lower is better)
Translates to: LHFKEISLPASECRDGFFYQNNL*VPSIAN
Trigger: GTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTA...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTTATGACTCGGACGTGTaGAGTACCAATAACATAATG +
Preference number: 5 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETYDSDV*STNNIM
Trigger: CATTATGTTATTGGTACTCAACACGTCCGAGTCATA...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCAGCAAGCCACAGAAACTaGAATTCCTCTTCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEAASHRN*NSSSPR
Trigger: CCTTGGGGAAGAGGAATTCAAGTTTCTGTGGCTTGC...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGCTTTCCTCCCCTCACTaGGTCCCTAATTGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMLSSPH*VPNCSL
Trigger: AAGAGAACAATTAGGGACCAAGTGAGGGGAGGAAAG...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS TCA 90 bp GTTTCAGTGGCATTCAATCAACCCAAAGATGTAATGTGTGACTCATaGAGCTTCTTTTCATGGTGGAAAGCTCTGCTGTCAAGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: VSVAFNQPKDVMCDS*SFFSWWKALLSSVS
Trigger: TGAAACACTTGACAGCAGAGCTTTCCACCATGAAAAGAAGCTTCATGAGTCACACATTACATCTTTGGGTTGATTGAATGCCACTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000673846.1
CDS TCA 90 bp CTAGAATGTTTCAGTGGCATTCAATCAACCCAAAGATGTAATGTGTaGCTCATGAAGCTTCTTTTCATGGTGGAAAGCTCTGCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: LECFSGIQSTQRCNV*LMKLLFMVESSAVK
Trigger: CTTGACAGCAGAGCTTTCCACCATGAAAAGAAGCTTCATGAGTCACACATTACATCTTTGGGTTGATTGAATGCCACTGAAACATTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000673846.1
CDS-3UTR CAA 90 bp GAGATAAGAATAAAACTCAGACCTTCTTCCAATAGGTGGGGCTGGCATGAGACTTTCAGTTCAAACGTGTaGGCGCTTTTCATCAAATTT +
Preference number: 5 (lower is better)
Translates to: EIRIKLRPSSNRWGWHETFSSNV*ALFIKF
Trigger: AAATTTGATGAAAAGCGCCAACACGTTTGAACTGAA...AGTCTCATGCCAGCCCCACCTATTGGAAGAAGGTCTGAGTTTTATTCTTATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCGAGGTAGCTTCCAAGTaGTTAACGGAATTTAGACTC +
Preference number: 5 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFEVASK*LTEFRL
Trigger: GAGTCTAAATTCCGTTAACAACTTGGAAGCTACCTC...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACCTTTTGCCAGATCTGTaGGCGACAGAAAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHLLPDL*ATEKSM
Trigger: CATTGACTTTTCTGTCGCCAACAGATCTGGCAAAAG...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAGTAAAAGCCTGCTTTaGCCAGATCTGTTGGCGACA +
Preference number: 5 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPSKSLL*PDLLAT
Trigger: TGTCGCCAACAGATCTGGCAAAAGCAGGCTTTTACT...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACCACAGCTTCAGCTTCTaGCAGAGAGTTTCTGAATAC +
Preference number: 5 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHHSFSF*QRVSEY
Trigger: GTATTCAGAAACTCTCTGCAAGAAGCTGAAGCTGTG...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCATACCAGAACAACCTGTaGGTCCCAAGCATTGCTAAC +
Preference number: 5 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEAYQNNL*VPSIAN
Trigger: GTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTA...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCACTTTCCTCCCCTCACTaGGTCCCTAATTGTTCTCTT +
Preference number: 5 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEALSSPH*VPNCSL
Trigger: AAGAGAACAATTAGGGACCAAGTGAGGGGAGGAAAG...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp ACAGATTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACAAGGCAGAAAAATCTaGATTTGCTCTGGAGTTTAC +
Preference number: 5 (lower is better)
Translates to: TDLFTRTTCWSQALLTSVQGRKI*ICSGVY
Trigger: GTAAACTCCAGAGCAAATCAAGATTTTTCTGCCTTG...TACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAATCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCCATTTTCGTTATTCATaGCACAGTGGTAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFHFRYS*HSGRNF
Trigger: GAAGTTCCTACCACTGTGCAATGAATAACGAAAATG...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCACACAGCTTCAGCTTCTaGCAGAGAGTTTCTGAATAC +
Preference number: 5 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEAHSFSF*QRVSEY
Trigger: GTATTCAGAAACTCTCTGCAAGAAGCTGAAGCTGTG...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp AATAGATTTTATGATGTGTTGACCCCGTGTTCTACAAGTGTCAATGAAGAAGCAGAGGTAGCTTCCAAGTaGTTAACGGAATTTAGACTC +
Preference number: 5 (lower is better)
Translates to: NRFYDVLTPCSTSVNEEAEVASK*LTEFRL
Trigger: GAGTCTAAATTCCGTTAACAACTTGGAAGCTACCTC...TGCTTCTTCATTGACACTTGTAGAACACGGGGTCAACACATCATAAAATCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTTATTTACCAGAACAACCTGTTGGTCCCAAGCATTGCTAACCAGTGTACTTTCCAGAAAAATCTTGATTaGCTCTGGAGTTTACAGGAT +
Preference number: 5 (lower is better)
Translates to: FIYQNNLLVPSIANQCTFQKNLD*LWSLQD
Trigger: ATCCTGTAAACTCCAGAGCAAATCAAGATTTTTCTG...GAAAGTACACTGGTTAGCAATGCTTGGGACCAACAGGTTGTTCTGGTAAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGCAAGGCAGAAAAATCTaGATTTGCTCTGGAGTTTAC +
Preference number: 5 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMQGRKI*ICSGVY
Trigger: GTAAACTCCAGAGCAAATCAAGATTTTTCTGCCTTG...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTCATTTTCGTTATTCATaGCACAGTGGTAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: LHFKEISLPASECRDGFFHFRYS*HSGRNF
Trigger: GAAGTTCCTACCACTGTGCAATGAATAACGAAAATG...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAACTTTTGCCAGATCTGTaGGCGACAGAAAAGTCAATG +
Preference number: 5 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKLLPDL*ATEKSM
Trigger: CATTGACTTTTCTGTCGCCAACAGATCTGGCAAAAG...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTGCATTTCAAGGAAATAAGTCTCCCAGCATCAGAATGCAGAGATGGATTCTTTAGATTTTATGATGTGTaGACCCCGTGTTCTACAAGT +
Preference number: 5 (lower is better)
Translates to: LHFKEISLPASECRDGFFRFYDV*TPCSTS
Trigger: ACTTGTAGAACACGGGGTCAACACATCATAAAATCT...AAAGAATCCATCTCTGCATTCTGATGCTGGGAGACTTATTTCCTTGAAATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTCTCAGTTTCATGCTGTaGAAGCAACTCAATGTTAAG +
Preference number: 5 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPLSFML*KQLNVK
Trigger: CTTAACATTGAGTTGCTTCAACAGCATGAAACTGAG...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263464.9
CDS-3UTR CAA 90 bp AAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTAAGCACTTCAGTTCAAACGTGTaGGCGCTTTTCATCAAATTT +
Preference number: 5 (lower is better)
Translates to: KGAYYLNTLYLSYKSPKHFSSNV*ALFIKF
Trigger: AAATTTGATGAAAAGCGCCAACACGTTTGAACTGAA...GTGCTTAGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTGAGTACCAATAACATAATGCAGAGGGGGACATTTTGTTGCACTGACAATATGTGGAGTTTACAGGATTaGATGGAGAGTTTGAATAAG +
Preference number: 5 (lower is better)
Translates to: LSTNNIMQRGTFCCTDNMWSLQD*MESLNK
Trigger: CTTATTCAAACTCTCCATCAAATCCTGTAAACTCCA...CATATTGTCAGTGCAACAAAATGTCCCCCTCTGCATTATGTTATTGGTACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTCATTTTCGTTATTCATaGCACAGTGGTAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPHFRYS*HSGRNF
Trigger: GAAGTTCCTACCACTGTGCAATGAATAACGAAAATG...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TGCAAAAAGGGTGCCTACTATTTAAATACCCTATACCTGAGTTACAAATCACCTGTACGAACTGTACCCTaGATTGTACTCCTACAAATA +
Preference number: 5 (lower is better)
Translates to: CKKGAYYLNTLYLSYKSPVRTVP*IVLLQI
Trigger: TATTTGTAGGAGTACAATCAAGGGTACAGTTCGTAC...AGGTGATTTGTAACTCAGGTATAGGGTATTTAAATAGTAGGCACCCTTTTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS-3UTR CAA 90 bp TTCCAATCACTATTCTTCAGGGCTGTCCATTCATTATCAAACCTAAGCATAAAAGTACGAACTGTACCCTaGATTGTACTCCTACAAATA +
Preference number: 5 (lower is better)
Translates to: FQSLFFRAVHSLSNLSIKVRTVP*IVLLQI
Trigger: TATTTGTAGGAGTACAATCAAGGGTACAGTTCGTAC...TTTTATGCTTAGGTTTGATAATGAATGGACAGCCCTGAAGAATAGTGATTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000532808.5
ENST00000615299.4
CDS CCA 72 bp GGACAAGCCCAGTCTTTTCAAGCGACACCTGTCGCCTaGCCTTTTCCGTGCCGGAGGGCGCGAGTCTCACGC +
Preference number: 6 (lower is better)
Translates to: GQAQSFQATPVA*PFPCRRARVSR
Trigger: GCGTGAGACTCGCGCCCTCCGGCACGGAAAAGGCCAGGCGACAGGTGTCGCTTGAAAAGACTGGGCTTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615299.4
CDS GCA 72 bp TTAGGCAACAACTGCTGCCCAGAGGCCGACGACGCATaGACCAGCAAGGACAAGCCCAGTCTTTTCAAGCGA +
Preference number: 6 (lower is better)
Translates to: LGNNCCPEADDA*TSKDKPSLFKR
Trigger: TCGCTTGAAAAGACTGGGCTTGTCCTTGCTGGTGCATGCGTCGTCGGCCTCTGGGCAGCAGTTGTTGCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526421.6
ENST00000528940.1
CDS GCA 72 bp ATCACTGTTACCTGCTGCCCAGAGGCCGACGACGCATaGACCAGCAAGGACAAGCCCAGTCTTTTCAAGCGA +
Preference number: 6 (lower is better)
Translates to: ITVTCCPEADDA*TSKDKPSLFKR
Trigger: TCGCTTGAAAAGACTGGGCTTGTCCTTGCTGGTGCATGCGTCGTCGGCCTCTGGGCAGCAGGTAACAGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527309.2
CDS GCA 72 bp AGGCATGAGAATTGCCTGAACCCAAGAGGCGGAGGTTaGAGTGAGCTGACATCACACCATCGCACTCCAATC +
Preference number: 6 (lower is better)
Translates to: RHENCLNPRGGG*SELTSHHRTPI
Trigger: GATTGGAGTGCGATGGTGTGATGTCAGCTCACTGCAACCTCCGCCTCTTGGGTTCAGGCAATTCTCATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673846.1
CDS GCA 72 bp CTCACAGACGTTGGGCTTTTCAACTGCAGACTTCAATaGTTTGTTTCCAGGTGGCAGGAGAAACATCACATC +
Preference number: 6 (lower is better)
Translates to: LTDVGLFNCRLQ*FVSRWQEKHHI
Trigger: GATGTGATGTTTCTCCTGCCACCTGGAAACAAAGCATTGAAGTCTGCAGTTGAAAAGCCCAACGTCTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000673846.1
CDS CAA 72 bp TGGTTTGCAAGCATGGTTTCCTGGATCTCACAGACGTaGGGCTTTTCAACTGCAGACTTCAATGCTTTGTTT +
Preference number: 6 (lower is better)
Translates to: WFASMVSWISQT*GFSTADFNALF
Trigger: AAACAAAGCATTGAAGTCTGCAGTTGAAAAGCCCAACGTCTGTGAGATCCAGGAAACCATGCTTGCAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000673846.1
CDS TCA 72 bp GCATTCAATCAACCCAAAGATGTAATGTGTGACTCATaGAGCTTCTTTTCATGGTGGAAAGCTCTGCTGTCA +
Preference number: 6 (lower is better)
Translates to: AFNQPKDVMCDS*SFFSWWKALLS
Trigger: TGACAGCAGAGCTTTCCACCATGAAAAGAAGCTTCATGAGTCACACATTACATCTTTGGGTTGATTGAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000673846.1
CDS TCA 72 bp AAAAGTGGAATACGTAGACATTCGGTACAGTTCACATaGCAAGTCGTATTTCAGTTCAAACGTGTTGGCGCT +
Preference number: 6 (lower is better)
Translates to: KSGIRRHSVQFT*QVVFQFKRVGA
Trigger: AGCGCCAACACGTTTGAACTGAAATACGACTTGTCATGTGAACTGTACCGAATGTCTACGTATTCCACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000532808.5
ENST00000615299.4
ENST00000673846.1
CDS CAA 90 bp TTGCACAGTGGTAGGAACTTCTCATCAAGGCAGAAAAATCTTGATTaGCTCTGGAGTTTACAGGATTTGATGGAGAGTTTGAATAAGAGC +
Preference number: 6 (lower is better)
Translates to: LHSGRNFSSRQKNLD*LWSLQDLMESLNKS
Trigger: GCTCTTATTCAAACTCTCCATCAAATCCTGTAAACTCCAGAGCAAATCAAGATTTTTCTGCCTTGATGAGAAGTTCCTACCACTGTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000532808.5
ENST00000615299.4
ENST00000673846.1
CDS TCA 72 bp TTCAGTGGCATTCAATCAACCCAAAGATGTAATGTGTaGCTCATGAAGCTTCTTTTCATGGTGGAAAGCTCT +
Preference number: 6 (lower is better)
Translates to: FSGIQSTQRCNV*LMKLLFMVESS
Trigger: AGAGCTTTCCACCATGAAAAGAAGCTTCATGAGTCACACATTACATCTTTGGGTTGATTGAATGCCACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000673846.1
CDS TCA 72 bp GAGGTAGCTTCCAAGTTGTTAACGGAATTTAGACTCTaGACGAATCTGCAGCTAGGATACAACTTTTTATGC +
Preference number: 6 (lower is better)
Translates to: EVASKLLTEFRL*TNLQLGYNFLC
Trigger: GCATAAAAAGTTGTATCCTAGCTGCAGATTCGTTCAGAGTCTAAATTCCGTTAACAACTTGGAAGCTACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000532808.5
ENST00000615299.4
ENST00000673846.1
CDS CAA 72 bp GATTTGCTCTGGAGTTTACAGGATTTGATGGAGAGTTaGAATAAGAGCCACGGAAATATCCACTGTTTTCTG +
Preference number: 6 (lower is better)
Translates to: DLLWSLQDLMES*NKSHGNIHCFL
Trigger: CAGAAAACAGTGGATATTTCCGTGGCTCTTATTCAAACTCTCCATCAAATCCTGTAAACTCCAGAGCAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000532808.5
ENST00000615299.4
ENST00000673846.1
CDS CAA 72 bp GGTAGGAACTTCTCATCAAGGCAGAAAAATCTTGATTaGCTCTGGAGTTTACAGGATTTGATGGAGAGTTTG +
Preference number: 6 (lower is better)
Translates to: GRNFSSRQKNLD*LWSLQDLMESL
Trigger: CAAACTCTCCATCAAATCCTGTAAACTCCAGAGCAAATCAAGATTTTTCTGCCTTGATGAGAAGTTCCTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000532808.5
ENST00000615299.4
ENST00000673846.1
CDS CAA 90 bp TCATCAAGGCAGAAAAATCTTGATTTGCTCTGGAGTTTACAGGATTaGATGGAGAGTTTGAATAAGAGCCACGGAAATATCCACTGTTTT +
Preference number: 6 (lower is better)
Translates to: SSRQKNLDLLWSLQD*MESLNKSHGNIHCF
Trigger: AAAACAGTGGATATTTCCGTGGCTCTTATTCAAACTCTCCATCAAATCCTGTAAACTCCAGAGCAAATCAAGATTTTTCTGCCTTGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263464.9
ENST00000526421.6
ENST00000532808.5
ENST00000615299.4
ENST00000673846.1