Pregenerated sensors for BIN2 (Homo sapiens)
Ensembl gene IDs: ENSG00000110934Ensembl transcript IDs: ENST00000544402.5, ENST00000603260.1, ENST00000604702.1, ENST00000605039.5, ENST00000605423.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GAAGGATCGCTTGAACCTGGGAGGCGAAGACTGCAGTaGGCTGAGATCGGATCACGCCACTGTACTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EGSLEPGRRRLQ*AEIGSRHCTPA Trigger: GGCTGGAGTACAGTGGCGTGATCCGATCTCAGCTCACTGCAGTCTTCGCCTCCCAGGTTCAAGCGATCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605423.1 |
||
| CDS-3UTR CCA 90 bp | GGCGAAGACTGCAGTGAGCTGAGATCGGATCACGCCACTGTACTCCAGCCTCGGATCCTGCCAACTCCCTaGGGGCCGCCGCCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GEDCSELRSDHATVLQPRILPTP*GPPPWP Trigger: GGGCCAGGGCGGCGGCCCCCAGGGAGTTGGCAGGAT...CCGAGGCTGGAGTACAGTGGCGTGATCCGATCTCAGCTCACTGCAGTCTTCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605423.1 |
||
| CDS-3UTR TCA 90 bp | GGCGAAGACTGCAGTGAGCTGAGATCGGATCACGCCACTGTACTCCAGCCTCGGGGTAGAAGGATCGCTTaGACCTGGGAGGCGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GEDCSELRSDHATVLQPRGRRIA*TWEAKT Trigger: AGTCTTCGCCTCCCAGGTTCAAGCGATCCTTCTACC...CCGAGGCTGGAGTACAGTGGCGTGATCCGATCTCAGCTCACTGCAGTCTTCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605423.1 |
||
| CDS-3UTR GCA 90 bp | GGCGAAGACTGCAGTGAGCTGAGATCGGATCACGCCACTGTACTCCAGCCTCGGGCTTTCCCCAATTTCTaGAGCACCTTCTCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GEDCSELRSDHATVLQPRAFPNF*STFSWA Trigger: GGCCCAGGAGAAGGTGCTGCAGAAATTGGGGAAAGC...CCGAGGCTGGAGTACAGTGGCGTGATCCGATCTCAGCTCACTGCAGTCTTCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605423.1 |
||
| CDS-3UTR GCA 90 bp | GGCGAAGACTGCAGTGAGCTGAGATCGGATCACGCCACTGTACTCCAGCCTCGGCTGGGAGGCGAAGACTaGAGTGAGCTGAGATCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GEDCSELRSDHATVLQPRLGGED*SELRSD Trigger: ATCCGATCTCAGCTCACTGCAGTCTTCGCCTCCCAG...CCGAGGCTGGAGTACAGTGGCGTGATCCGATCTCAGCTCACTGCAGTCTTCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605423.1 |
||
| CDS-3UTR GCA 90 bp | GGCGAAGACTGCAGTGAGCTGAGATCGGATCACGCCACTGTACTCCAGCCTCGGCTGCTAAACTTCTTCTaGACCTGCTTGGCGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GEDCSELRSDHATVLQPRLLNFF*TCLAKR Trigger: CCTCTTCGCCAAGCAGGTGCAGAAGAAGTTTAGCAG...CCGAGGCTGGAGTACAGTGGCGTGATCCGATCTCAGCTCACTGCAGTCTTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605423.1 |
||
| CDS-3UTR CAA 90 bp | GGCGAAGACTGCAGTGAGCTGAGATCGGATCACGCCACTGTACTCCAGCCTCGGGAAGTTGCTAGCGCTTaGTTCAAATCGTTCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GEDCSELRSDHATVLQPREVASA*FKSFIF Trigger: AAAGATGAACGATTTGAACAAAGCGCTAGCAACTTC...CCGAGGCTGGAGTACAGTGGCGTGATCCGATCTCAGCTCACTGCAGTCTTCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605423.1 |
||
| CDS-3UTR CAA 90 bp | GGCGAAGACTGCAGTGAGCTGAGATCGGATCACGCCACTGTACTCCAGCCTCGGCAAACAAACAAACTGTaGTTGGTAGAAGTTGCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GEDCSELRSDHATVLQPRQTNKL*LVEVAS Trigger: GCTAGCAACTTCTACCAACAACAGTTTGTTTGTTTG...CCGAGGCTGGAGTACAGTGGCGTGATCCGATCTCAGCTCACTGCAGTCTTCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605423.1 |
||
| CDS GCA 90 bp | CTGCAGCACCATATCGAAAACACGTTTAGGTTCTCTGAGTATGCATaGGAAGCCGCCATGTACACTGCGTTTCTTGCTCCAGGTAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQHHIENTFRFSEYA*EAAMYTAFLAPGRL Trigger: GAGCCTACCTGGAGCAAGAAACGCAGTGTACATGGCGGCTTCGCATGCATACTCAGAGAACCTAAACGTGTTTTCGATATGGTGCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544402.5 |
||
| CDS CCA 90 bp | TCTACATTCCATCAGTTTTCTGCTGATAAATCAACTCGGGAGAGCTaGTTGCCTTTAAGCCTTCCCAGGGCTCAAAGCAGTGCTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: STFHQFSADKSTRES*LPLSLPRAQSSAPL Trigger: AAGTGGAGCACTGCTTTGAGCCCTGGGAAGGCTTAAAGGCAACCAGCTCTCCCGAGTTGATTTATCAGCAGAAAACTGATGGAATGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603260.1 ENST00000604702.1 |
||
| CDS CCA 90 bp | TCCTACCACCCAGTGACTGAGGCTACACAAATGCACAGTGTGAACTaGCTCCTTTGTTTTCCTATTTTCTTGGATAGAGAAGCTAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SYHPVTEATQMHSVN*LLCFPIFLDREAKL Trigger: CAGCTTAGCTTCTCTATCCAAGAAAATAGGAAAACAAAGGAGCCAGTTCACACTGTGCATTTGTGTAGCCTCAGTCACTGGGTGGTAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605039.5 |
||
| CDS TCA 90 bp | TGTTTTTACCTTAACAGTTGTAGCTTCTTCCTACCACCCAGTGACTaGGGCTACACAAATGCACAGTGTGAACTGGCTCCTTTGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFYLNSCSFFLPPSD*GYTNAQCELAPLFS Trigger: GGAAAACAAAGGAGCCAGTTCACACTGTGCATTTGTGTAGCCTCAGTCACTGGGTGGTAGGAAGAAGCTACAACTGTTAAGGTAAAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000605039.5 |
||
| CDS CAA 72 bp | AGTATGCATGCGAAGCCGCCATGTACACTGCGTTTCTaGCTCCAGGTAGGCTCTAAGCCTGGAACTGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SMHAKPPCTLRF*LQVGSKPGTGR Trigger: CCTACCAGTTCCAGGCTTAGAGCCTACCTGGAGCAAGAAACGCAGTGTACATGGCGGCTTCGCATGCATACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544402.5 |
||
| CDS CAA 90 bp | GGTTCTCTGAGTATGCATGCGAAGCCGCCATGTACACTGCGTTTCTaGCTCCAGGTAGGCTCTAAGCCTGGAACTGGTAGGGATAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSLSMHAKPPCTLRF*LQVGSKPGTGRDRV Trigger: CACTCTATCCCTACCAGTTCCAGGCTTAGAGCCTACCTGGAGCAAGAAACGCAGTGTACATGGCGGCTTCGCATGCATACTCAGAGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544402.5 |
||
| CDS GCA 72 bp | CCCACACTGTTTCGAGCTAGACCTTCCCATAGGCCCTaGTCTCGGGTCTACCAGATTTGTAAGTCTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PTLFRARPSHRP*SRVYQICKSSE Trigger: CTCTGAAGACTTACAAATCTGGTAGACCCGAGAGCAGGGCCTATGGGAAGGTCTAGCTCGAAACAGTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000603260.1 |
||
| CDS CAA 72 bp | CAGTTTTCTGCTGATAAATCAACTCGGGAGAGCTGGTaGCCTTTAAGCCTTCCCAGGGCTCAAAGCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QFSADKSTRESW*PLSLPRAQSSA Trigger: AGCACTGCTTTGAGCCCTGGGAAGGCTTAAAGGCAACCAGCTCTCCCGAGTTGATTTATCAGCAGAAAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603260.1 ENST00000604702.1 |
||
| CDS CAA 90 bp | CTTCTGGCTGACATGTCTTCCCAAACCGCCTTGTCTACTAGAGGGTaGGTAGGTGGAGAGCAGAGGCTCAGGTTAGAAGCAAAGAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: LLADMSSQTALSTRG*VGGEQRLRLEAKKI Trigger: TATTTTCTTTGCTTCTAACCTGAGCCTCTGCTCTCCACCTACCAACCCTCTAGTAGACAAGGCGGTTTGGGAAGACATGTCAGCCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603260.1 |
||
| CDS TCA 72 bp | CTTAACAGTTGTAGCTTCTTCCTACCACCCAGTGACTaGGGCTACACAAATGCACAGTGTGAACTGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LNSCSFFLPPSD*GYTNAQCELAP Trigger: AGGAGCCAGTTCACACTGTGCATTTGTGTAGCCTCAGTCACTGGGTGGTAGGAAGAAGCTACAACTGTTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605039.5 |
||
| CDS CCA 72 bp | CATCAGTTTTCTGCTGATAAATCAACTCGGGAGAGCTaGTTGCCTTTAAGCCTTCCCAGGGCTCAAAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: HQFSADKSTRES*LPLSLPRAQSS Trigger: ACTGCTTTGAGCCCTGGGAAGGCTTAAAGGCAACCAGCTCTCCCGAGTTGATTTATCAGCAGAAAACTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000603260.1 ENST00000604702.1 |
||
| CDS CAA 90 bp | ACATTCCATCAGTTTTCTGCTGATAAATCAACTCGGGAGAGCTGGTaGCCTTTAAGCCTTCCCAGGGCTCAAAGCAGTGCTCCACTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TFHQFSADKSTRESW*PLSLPRAQSSAPLL Trigger: TAAAAGTGGAGCACTGCTTTGAGCCCTGGGAAGGCTTAAAGGCAACCAGCTCTCCCGAGTTGATTTATCAGCAGAAAACTGATGGAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000603260.1 ENST00000604702.1 |
||
| CDS GCA 72 bp | CATATCGAAAACACGTTTAGGTTCTCTGAGTATGCATaGGAAGCCGCCATGTACACTGCGTTTCTTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HIENTFRFSEYA*EAAMYTAFLAP Trigger: TGGAGCAAGAAACGCAGTGTACATGGCGGCTTCGCATGCATACTCAGAGAACCTAAACGTGTTTTCGATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544402.5 |
||