Pregenerated sensors for BIK (Homo sapiens)
Ensembl gene IDs: ENSG00000100290Ensembl transcript IDs: ENST00000216115.3
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTTATTGAGCACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGCAGTGGTCATGGGGGTaGGGCCAGCCCCGCCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: FIEHSCSSESIPVDSLPRQWSWG*GQPRPE Trigger: CTCAGGGCGGGGCTGGCCCCACCCCCATGACCACTG...CCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTGCTCAATAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| 3UTR-3UTR CCA 90 bp | CACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATCTGCTACCTGCCGTGTaGGCAGGGGCAGGAGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: HSCSSESIPVDSLPRASHLLPAV*AGAGVN Trigger: ATTCACTCCTGCCCCTGCCCACACGGCAGGTAGCAG...ATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| 3UTR CAA 90 bp | TTTATTGAGCACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTaGCCGAGGGCATCACATATCACACAGGGGTGTGACCAGCACTCC | + |
|
Preference number: 2 (lower is better) Translates to: FIEHSCSSESIPVDS*PRASHITQGCDQHS Trigger: GGAGTGCTGGTCACACCCCTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTGCTCAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTGAGCACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGGCCACAGTTAACCGGTaGCAATTGCAGAGCCATAGG | + |
|
Preference number: 2 (lower is better) Translates to: FIEHSCSSESIPVDSLPRATVNR*QLQSHR Trigger: CCTATGGCTCTGCAATTGTCACCGGTTAACTGTGGC...CCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTGCTCAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| 3UTR-3UTR CCA 90 bp | GAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATATCACACAGGGGTGTGTGAATGGCTCTTCCTaGGCACAGGCCACAGTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: ESIPVDSLPRASHITQGCVNGSS*AQATVN Trigger: GTTAACTGTGGCCTGTGCCCAGGAAGAGCCATTCAC...ACACCCCTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| 3UTR-3UTR CCA 90 bp | CAACATTTTATTGAGCACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTTGAGGGGCAGGAGTGAATaGCTCTTCCTGGGCACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: QHFIEHSCSSESIPVDSLRGRSE*LFLGTG Trigger: GCCTGTGCCCAGGAAGAGCCATTCACTCCTGCCCCT...CAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTGCTCAATAAAATGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| 3UTR-3UTR GCA 90 bp | GAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATATCACACAGGGGTGTTTAACCGGTGACAATTaGAGAGCCATAGGAATTCAT | + |
|
Preference number: 2 (lower is better) Translates to: ESIPVDSLPRASHITQGCLTGDN*RAIGIH Trigger: ATGAATTCCTATGGCTCTGCAATTGTCACCGGTTAA...ACACCCCTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| 3UTR TCA 72 bp | TTCTTTGCCGAGGGCATCACATATCACACAGGGGTGTaGCCAGCACTCCCCCTGCTACCTGCCGTGTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FFAEGITYHTGV*PALPLLPAVWA Trigger: TGCCCACACGGCAGGTAGCAGGGGGAGTGCTGGTCACACCCCTGTGTGATATGTGATGCCCTCGGCAAAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| 3UTR TCA 72 bp | AATGGCTCTTCCTGGGCACAGGCCACAGTTAACCGGTaGCAATTGCAGAGCCATAGGAATTCATCTTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: NGSSWAQATVNR*QLQSHRNSSFR Trigger: TCTAAAAGATGAATTCCTATGGCTCTGCAATTGTCACCGGTTAACTGTGGCCTGTGCCCAGGAAGAGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR TCA 90 bp | CACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATCGCCGGGGCCTCACTTaGGCAGCAGGTGCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSCSSESIPVDSLPRASHRRGLT*AAGAGP Trigger: GGGGCCTGCACCTGCTGCTCAAGTGAGGCCCCGGCG...ATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR GCA 90 bp | TCTTTGCCGAGGGCATCACATATCACACAGGGGTGTGACCAGCACTCCCCCTGCGGGGGTTCCAGGAGCTaGTCATACAGGAGGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPRASHITQGCDQHSPCGGSRS*SYRRVS Trigger: GGAGACCCTCCTGTATGAGCAGCTCCTGGAACCCCC...GCAGGGGGAGTGCTGGTCACACCCCTGTGTGATATGTGATGCCCTCGGCAAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR TCA 90 bp | TCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATATCACACAGGGTGCAGGCCCCCGCTaGGCAGCGGCAGCAGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSESIPVDSLPRASHITQGAGPR*AAAAAA Trigger: CGCTGCTGCTGCCGCTGCTCAGCGGGGGCCTGCACC...CTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGGGCACAGGCCACAGTTAACCGGTGACAATTGCAGAGCCATAGGAATTGACCCAGGCTGTGCATaGCCACCTCGGAGAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGHRPQLTGDNCRAIGIDPGCA*PPRRAG Trigger: CCCAGCTCTCCGAGGTGGCCATGCACAGCCTGGGTC...AATTCCTATGGCTCTGCAATTGTCACCGGTTAACTGTGGCCTGTGCCCAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR GCA 90 bp | GAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATATCACACAGGGGTGTCCATCTCGTCCCCGATaGAGGCCAGCCGCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESIPVDSLPRASHITQGCPSRPR*RPAAGP Trigger: TGGCCCTGCGGCTGGCCTGCATCGGGGACGAGATGG...ACACCCCTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR TCA 90 bp | CTCAGCAGTGTTCCAGCACTATCTCGGGGTTTAAATATAAAAAGGCATCATGAGCCAGGCGCGGGGCCCTaGGGCTCACGTCCATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPALSRGLNIKRHHEPGAGP*GSRPSR Trigger: ACGAGATGGACGTGAGCCTCAGGGCCCCGCGCCTGG...CTCATGATGCCTTTTTATATTTAAACCCCGAGATAGTGCTGGAACACTGCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR GCA 90 bp | GAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATATCACACAGGGGTGTCACTTGAGCAGCAGGTaGAGGCCCCCGCTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESIPVDSLPRASHITQGCHLSSR*RPPLSS Trigger: GCTGCTCAGCGGGGGCCTGCACCTGCTGCTCAAGTG...ACACCCCTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGCAGTGTTCCAGCACTATCTCGGGGTTTAAATATAAAAAGGCATCATGAGCAGTGGTCATGGGGGTaGGGCCAGCCCCGCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPALSRGLNIKRHHEQWSWG*GQPRPE Trigger: CTCAGGGCGGGGCTGGCCCCACCCCCATGACCACTG...CTCATGATGCCTTTTTATATTTAAACCCCGAGATAGTGCTGGAACACTGCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTGAGCACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGCTGCTACCTGCCGTGTaGGCAGGGGCAGGAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FIEHSCSSESIPVDSLPRLLPAV*AGAGVN Trigger: ATTCACTCCTGCCCCTGCCCACACGGCAGGTAGCAG...CCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTGCTCAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR TCA 90 bp | TCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATATCACACAGTATCACACAGGGGTGTaGCCAGCACTCCCCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSESIPVDSLPRASHITQYHTGV*PALPLL Trigger: TAGCAGGGGGAGTGCTGGTCACACCCCTGTGTGATA...CTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATATCACACAGTGCCAAGAACCTCCATaGTCGGGGGTTCCAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSESIPVDSLPRASHITQCQEPP*SGVPGA Trigger: AGCTCCTGGAACCCCCGACCATGGAGGTTCTTGGCA...CTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| 3UTR CAA 72 bp | CACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTaGCCGAGGGCATCACATATCACACAGGGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSCSSESIPVDS*PRASHITQGCD Trigger: GTCACACCCCTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR GCA 90 bp | CAACATTTTATTGAGCACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTTGCAGCCGCAGGGCCAATaGGTCACTGCCCTCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: QHFIEHSCSSESIPVDSLQPQGQ*VTALHA Trigger: TGCATGGAGGGCAGTGACGCATTGGCCCTGCGGCTG...CAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTGCTCAATAAAATGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGCAGTGTTCCAGCACTATCTCGGGGTTTAAATATAAAAAGGCATCATGAGCAGACATTTCTCCTCTaGCGGCGGCGATGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPALSRGLNIKRHHEQTFLL*RRRCWQ Trigger: CTGCCAGCATCGCCGCCGCCAGAGGAGAAATGTCTG...CTCATGATGCCTTTTTATATTTAAACCCCGAGATAGTGCTGGAACACTGCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR TCA 90 bp | GAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATATCACACAGGGGTGTGCCACAGTTAACCGGTaGCAATTGCAGAGCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESIPVDSLPRASHITQGCATVNR*QLQSHR Trigger: CCTATGGCTCTGCAATTGTCACCGGTTAACTGTGGC...ACACCCCTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR CCA 90 bp | CACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATCCATCAAGATGTCTCTaGAGAGGGGTCTTACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSCSSESIPVDSLPRASHPSRCL*RGVLLQ Trigger: CTGAAGTAAGACCCCTCTCCAGAGACATCTTGATGG...ATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTGAGCACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGGTGAATGGCTCTTCCTaGGCACAGGCCACAGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FIEHSCSSESIPVDSLPRVNGSS*AQATVN Trigger: GTTAACTGTGGCCTGTGCCCAGGAAGAGCCATTCAC...CCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTGCTCAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR TCA 90 bp | CTCAGCAGTGTTCCAGCACTATCTCGGGGTTTAAATATAAAAAGGCATCATGAGCAGTCTGGTCGTAGATaGAAGCCAGACCCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPALSRGLNIKRHHEQSGRR*KPDPGC Trigger: ACAGCCTGGGTCTGGCTTTCATCTACGACCAGACTG...CTCATGATGCCTTTTTATATTTAAACCCCGAGATAGTGCTGGAACACTGCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR GCA 90 bp | GAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATATCACACAGGGGTGTCTTCAGAGTCAGTCATaGCAAGAACCTCCATGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ESIPVDSLPRASHITQGCLQSQS*QEPPWS Trigger: CGACCATGGAGGTTCTTGGCATGACTGACTCTGAAG...ACACCCCTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGTGTTCCAGCACTATCTCGGGGTTTAAATATAAAAAGGCATCATGAGAAAAGGGGCAGGAGTGAATaGCTCTTCCTGGGCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPALSRGLNIKRHHEKRGRSE*LFLGTG Trigger: GCCTGTGCCCAGGAAGAGCCATTCACTCCTGCCCCT...TTTCTCATGATGCCTTTTTATATTTAAACCCCGAGATAGTGCTGGAACACTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR GCA 90 bp | TTTATTGAGCACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGCGTCACTGCCCTCCATaGATTCCAAAGAATCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIEHSCSSESIPVDSLPRRHCPP*IPKNRS Trigger: ACTTCGATTCTTTGGAATGCATGGAGGGCAGTGACG...CCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTGCTCAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR GCA 90 bp | TTTATTGAGCACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGTTTATTGAGCACTCCTaGTCCTCGGAATCTATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FIEHSCSSESIPVDSLPRFIEHS*SSESIP Trigger: TGGAATAGATTCCGAGGAGCAGGAGTGCTCAATAAA...CCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTGCTCAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGTGTTCCAGCACTATCTCGGGGTTTAAATATAAAAAGGCATCATGAGAAAAAACCAACATTTTATTaGGCACTCCTGCTCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVPALSRGLNIKRHHEKKPTFY*ALLLLG Trigger: TCCGAGGAGCAGGAGTGCTCAATAAAATGTTGGTTT...TTTCTCATGATGCCTTTTTATATTTAAACCCCGAGATAGTGCTGGAACACTGCT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR GCA 90 bp | CAACATTTTATTGAGCACTCCTGCTCCTCGGAATCTATTCCAGTAGATTCTTTGTTAACCGGTGACAATTaGAGAGCCATAGGAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QHFIEHSCSSESIPVDSLLTGDN*RAIGIH Trigger: ATGAATTCCTATGGCTCTGCAATTGTCACCGGTTAA...CAAAGAATCTACTGGAATAGATTCCGAGGAGCAGGAGTGCTCAATAAAATGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS TCA 90 bp | GGCTGTGCATGGCCACCTCGGAGAGCTGGGCCAGGCGCGGGGCCCTaGGGCTCACGTCCATCTCGTCCCCGATGCAGGCCAGCCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GCAWPPRRAGPGAGP*GSRPSRPRCRPAAG Trigger: CCCTGCGGCTGGCCTGCATCGGGGACGAGATGGACGTGAGCCTCAGGGCCCCGCGCCTGGCCCAGCTCTCCGAGGTGGCCATGCACAGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR CAA 90 bp | TCTTTGCCGAGGGCATCACATATCACACAGGGGTGTGACCAGCACTCCCCCTGCCCGCCGGGGCCTCACTaGAGCAGCAGGTGCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLPRASHITQGCDQHSPCPPGPH*SSRCRP Trigger: GGGCCTGCACCTGCTGCTCAAGTGAGGCCCCGGCGG...GCAGGGGGAGTGCTGGTCACACCCCTGTGTGATATGTGATGCCCTCGGCAAAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS GCA 90 bp | GAGTCAGTCATGCCAAGAACCTCCATGGTCGGGGGTTCCAGGAGCTaGTCATACAGGAGGGTCTCCATCAAGATGTCTCTGGAGAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ESVMPRTSMVGGSRS*SYRRVSIKMSLERG Trigger: ACCCCTCTCCAGAGACATCTTGATGGAGACCCTCCTGTATGAGCAGCTCCTGGAACCCCCGACCATGGAGGTTCTTGGCATGACTGACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS CCA 90 bp | GTTCCAGGAGCTGCTCATACAGGAGGGTCTCCATCAAGATGTCTCTaGAGAGGGGTCTTACTTCAGACATTTCTCCTCTGGCGGCGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VPGAAHTGGSPSRCL*RGVLLQTFLLWRRR Trigger: TCGCCGCCGCCAGAGGAGAAATGTCTGAAGTAAGACCCCTCTCCAGAGACATCTTGATGGAGACCCTCCTGTATGAGCAGCTCCTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR CAA 90 bp | TCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATATCACACAGGAAACCAACATTTTATaGAGCACTCCTGCTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSESIPVDSLPRASHITQETNIL*STPAPR Trigger: CCGAGGAGCAGGAGTGCTCAATAAAATGTTGGTTTC...CTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS-3UTR CAA 90 bp | TCCTCGGAATCTATTCCAGTAGATTCTTTGCCGAGGGCATCACATATCACACAGATTCCAGTAGATTCTTaGCCGAGGGCATCACATATC | + |
|
Preference number: 5 (lower is better) Translates to: SSESIPVDSLPRASHITQIPVDS*PRASHI Trigger: GATATGTGATGCCCTCGGCAAAGAATCTACTGGAAT...CTGTGTGATATGTGATGCCCTCGGCAAAGAATCTACTGGAATAGATTCCGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS TCA 72 bp | TGGCCACCTCGGAGAGCTGGGCCAGGCGCGGGGCCCTaGGGCTCACGTCCATCTCGTCCCCGATGCAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: WPPRRAGPGAGP*GSRPSRPRCRP Trigger: TGGCCTGCATCGGGGACGAGATGGACGTGAGCCTCAGGGCCCCGCGCCTGGCCCAGCTCTCCGAGGTGGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||
| CDS GCA 72 bp | ATGCCAAGAACCTCCATGGTCGGGGGTTCCAGGAGCTaGTCATACAGGAGGGTCTCCATCAAGATGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: MPRTSMVGGSRS*SYRRVSIKMSL Trigger: CAGAGACATCTTGATGGAGACCCTCCTGTATGAGCAGCTCCTGGAACCCCCGACCATGGAGGTTCTTGGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216115.3 |
||