RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BICRAL (Homo sapiens)

Ensembl gene IDs: ENSG00000112624

Ensembl transcript IDs: ENST00000314073.9, ENST00000394168.1, ENST00000614467.4

Found 899 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTGCGTATGTGCTACTGGCTTTTCCACCAGGGCTGCGGGTCCCTaGCAGCACAGCCAGCAATTTACTGCTCAAAGATGGCTGAGGGGG +
Preference number: 1 (lower is better)
Translates to: PCVCATGFSTRAAGP*QHSQQFTAQRWLRG
Trigger: CCCCCTCAGCCATCTTTGAGCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCAGTAGCACATACGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CCA 90 bp GAACCATCAATAGGGAAGCCCTGCAATGCCCTGCGTATGTGCTACTaGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCA +
Preference number: 1 (lower is better)
Translates to: EPSIGKPCNALRMCY*LFHQGCGSLAAQPA
Trigger: TGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCAGTAGCACATACGCAGGGCATTGCAGGGCTTCCCTATTGATGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR GCA 90 bp TTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTaGTCAAAGATGGCTGAGGGGGAAGAACCATGTGGTCTTCCCCTC +
Preference number: 1 (lower is better)
Translates to: FHQGCGSLAAQPAIY*SKMAEGEEPCGLPL
Trigger: GAGGGGAAGACCACATGGTTCTTCCCCCTCAGCCATCTTTGAGCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR GCA 90 bp GCACTTGAACCATCAATAGGGAAGCCCTGCAATGCCCTGCGTATGTaGTACTGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAG +
Preference number: 1 (lower is better)
Translates to: ALEPSIGKPCNALRM*YWLFHQGCGSLAAQ
Trigger: CTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCAGTAGCACATACGCAGGGCATTGCAGGGCTTCCCTATTGATGGTTCAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CCA 90 bp GCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCTCAAAGATaGCTGAGGGGGAAGAACCATGTGGTCTTCCCCTCAACAATAACA +
Preference number: 1 (lower is better)
Translates to: AAGPWQHSQQFTAQR*LRGKNHVVFPSTIT
Trigger: TGTTATTGTTGAGGGGAAGACCACATGGTTCTTCCCCCTCAGCCATCTTTGAGCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR GCA 90 bp TCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGAAGCCCTaGAATGCCCTGCGTATGTGCTACTGGCTTTTCCACCAGGGCTGC +
Preference number: 1 (lower is better)
Translates to: SGSIRKALEPSIGKP*NALRMCYWLFHQGC
Trigger: GCAGCCCTGGTGGAAAAGCCAGTAGCACATACGCAGGGCATTGCAGGGCTTCCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CCA 90 bp AGGCCAAACAGAAACCATGACAGGGCATATCCTTTGGCTCTCAAATaGGAATCCCATGTCTCAGATCTTTCCTTTCAGTGGTGGGCTAGC +
Preference number: 1 (lower is better)
Translates to: RPNRNHDRAYPLALK*ESHVSDLSFQWWAS
Trigger: GCTAGCCCACCACTGAAAGGAAAGATCTGAGACATGGGATTCCCATTTGAGAGCCAAAGGATATGCCCTGTCATGGTTTCTGTTTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CCA 90 bp TGGGAATCCCATGTCTCAGATCTTTCCTTTCAGTGGTGGGCTAGCTaGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCA +
Preference number: 1 (lower is better)
Translates to: WESHVSDLSFQWWAS*LPLVCLCFGNELLP
Trigger: TGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCTAGCCCACCACTGAAAGGAAAGATCTGAGACATGGGATTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR TCA 90 bp AAGCTAGGATTGGGACAGCAGGGCAGGATAGGGAAGAAAGAGAGGTaGCAAATGTACATGAAGCTTATCTTGTCTCTTGAGAATTCCACT +
Preference number: 1 (lower is better)
Translates to: KLGLGQQGRIGKKER*QMYMKLILSLENST
Trigger: AGTGGAATTCTCAAGAGACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCCTGCTGTCCCAATCCTAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR GCA 90 bp CTAGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTaGCAGGGGTCACTACTGTTCTCAGACAAGAAGCATAAACAAGGC +
Preference number: 1 (lower is better)
Translates to: LAGYLWFVCVLVMNC*QGSLLFSDKKHKQG
Trigger: GCCTTGTTTATGCTTCTTGTCTGAGAACAGTAGTGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CCA 90 bp GCTCTCAAATGGGAATCCCATGTCTCAGATCTTTCCTTTCAGTGGTaGGCTAGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAA +
Preference number: 1 (lower is better)
Translates to: ALKWESHVSDLSFQW*ASWLPLVCLCFGNE
Trigger: TTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCTAGCCCACCACTGAAAGGAAAGATCTGAGACATGGGATTCCCATTTGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR GCA 90 bp ACTTTCATAACACTTGAAATGAGTGGGGCCTATCAGACTGCTTTCTaGCAAGGATTAATTTTACTAAAGGATCTCCCTGTAATCACGACA +
Preference number: 1 (lower is better)
Translates to: TFITLEMSGAYQTAF*QGLILLKDLPVITT
Trigger: TGTCGTGATTACAGGGAGATCCTTTAGTAAAATTAATCCTTGGCAGAAAGCAGTCTGATAGGCCCCACTCATTTCAAGTGTTATGAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CCA 90 bp TACAATGACATTAAGAATAAAGGTAACAACAGAAATGGGATAACCTaGGGCAGGTATACGAGAAAGGAAAACGGAGAATACTCCCTGACA +
Preference number: 1 (lower is better)
Translates to: YNDIKNKGNNRNGIT*GRYTRKENGEYSLT
Trigger: TGTCAGGGAGTATTCTCCGTTTTCCTTTCTCGTATACCTGCCCCAGGTTATCCCATTTCTGTTGTTACCTTTATTCTTAATGTCATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCTTTTCCACCAGGGCTaGGGGTCCCTGGCAGCACAG +
Preference number: 2 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPLFHQG*GSLAAQ
Trigger: CTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGAGACCATTTCCATTTaGTTTTGCCAGGAACGAATG +
Preference number: 2 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCETISI*FCQERM
Trigger: CATTCGTTCCTGGCAAAAGCAAATGGAAATGGTCTC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGGCAACACATTAAAGTaGAGACCAGTGGCTGCACCT +
Preference number: 2 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVGNTLK*RPVAAP
Trigger: AGGTGCAGCCACTGGTCTTCACTTTAATGTGTTGCC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCCTTTTCCACCAGGGCTaGGGGTCCCTGGCAGCACAG +
Preference number: 2 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGLFHQG*GSLAAQ
Trigger: CTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAG...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTAGCCCTGCAATGCCCTaGGTATGTGCTACTGGCTTT +
Preference number: 2 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPSPAMP*VCATGF
Trigger: AAAGCCAGTAGCACATACGCAGGGCATTGCAGGGCT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGTGAAGACCAGTGGCTaGACCTCCAGAGCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: GQDREEREVTNVHEAYLVVKTSG*TSRARE
Trigger: CTCCCTGGCTCTGGAGGTGCAGCCACTGGTCTTCAC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGGAACGAATGTAACTaGTCCGGGGTGGGGTCTCGG +
Preference number: 2 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVRNECN*SGVGSR
Trigger: CCGAGACCCCACCCCGGACCAGTTACATTCGTTCCT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAGGAACGAATGTAACTaGTCCGGGGTGGGGTCTCGG +
Preference number: 2 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSRNECN*SGVGSR
Trigger: CCGAGACCCCACCCCGGACCAGTTACATTCGTTCCT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCAGCCAGCAATTTACTaGTCAAAGATGGCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPQPAIY*SKMAEG
Trigger: CCCCTCAGCCATCTTTGAGCAGTAAATTGCTGGCTG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCTGCGTATGTGCTACTaGCTTTTCCACCAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLRMCY*LFHQGC
Trigger: GCAGCCCTGGTGGAAAAGCCAGTAGCACATACGCAG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCTTTCCTTTCAGTGGTaGGCTAGCTGGTTACCTTTG +
Preference number: 2 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVLSFQW*ASWLPL
Trigger: CAAAGGTAACCAGCTAGCCCACCACTGAAAGGAAAG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGATCTTTCCTTTCAGTaGTGGGCTAGCTGGTTACCT +
Preference number: 2 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVDLSFQ*WASWLP
Trigger: AGGTAACCAGCTAGCCCACCACTGAAAGGAAAGATC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTATATGCCTAAAAGCATaGGGTTTTGCTCCGGAAGCA +
Preference number: 2 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVICLKA*GFAPEA
Trigger: TGCTTCCGGAGCAAAACCTCATGCTTTTAGGCATAT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTGGGGCCTATCAGACTaGTTTCTGCCAAGGATTAAT +
Preference number: 2 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVWGLSD*FLPRIN
Trigger: ATTAATCCTTGGCAGAAAGCAGTCTGATAGGCCCCA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCTTTTCCACCAGGGCTaGGGGTCCCTGGCAGCACAG +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFILFHQG*GSLAAQ
Trigger: CTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAGCCCTGCAATGCCCTaGGTATGTGCTACTGGCTTT +
Preference number: 2 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSSPAMP*VCATGF
Trigger: AAAGCCAGTAGCACATACGCAGGGCATTGCAGGGCT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCTCCTCTGTACACTGTaGCTCTTAACTGGTTTCCAT +
Preference number: 2 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVLLCTL*LLTGFH
Trigger: ATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTAAAGATCAAGCAGGCTaGAGACAGGAGACCATTTCC +
Preference number: 2 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPKDQAG*RQETIS
Trigger: GGAAATGGTCTCCTGTCTCCAGCCTGCTTGATCTTT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTTTACTGCTCAAAGATaGCTGAGGGGGAAGAACCAT +
Preference number: 2 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVFTAQR*LRGKNH
Trigger: ATGGTTCTTCCCCCTCAGCCATCTTTGAGCAGTAAA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGGGTCATCCCCATGTTaGCGACAGCCAGAAGCAGAT +
Preference number: 2 (lower is better)
Translates to: GQDREEREVTNVHEAYLVGSSPC*RQPEAD
Trigger: ATCTGCTTCTGGCTGTCGCCAACATGGGGATGACCC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCATCAGAAAAGCACTTaGACCATCAATAGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPHQKST*TINREA
Trigger: GGCTTCCCTATTGATGGTTCAAGTGCTTTTCTGATG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTATATGCCTAAAAGCATaGGGTTTTGCTCCGGAAGCA +
Preference number: 2 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPICLKA*GFAPEA
Trigger: TGCTTCCGGAGCAAAACCTCATGCTTTTAGGCATAT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCAGCCAGCAATTTACTaGTCAAAGATGGCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGQPAIY*SKMAEG
Trigger: CCCCTCAGCCATCTTTGAGCAGTAAATTGCTGGCTG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAATGCCCTGCGTATGTaGTACTGGCTTTTCCACCAG +
Preference number: 2 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSNALRM*YWLFHQ
Trigger: CTGGTGGAAAAGCCAGTAGCACATACGCAGGGCATT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAGGGAAGCCCTGCAATaGCCTGCGTATGTGCTACTG +
Preference number: 2 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGREALQ*PAYVLL
Trigger: CAGTAGCACATACGCAGGGCATTGCAGGGCTTCCCT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTCAATAGGGAAGCCCTaGAATGCCCTGCGTATGTGC +
Preference number: 2 (lower is better)
Translates to: GQDREEREVTNVHEAYLVSIGKP*NALRMC
Trigger: GCACATACGCAGGGCATTGCAGGGCTTCCCTATTGA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CAA 90 bp CATGTCTCAGATCTTTCCTTTCAGTGGTGGGCTAGCTGGTTACCTTaGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACT +
Preference number: 2 (lower is better)
Translates to: HVSDLSFQWWASWLP*VCLCFGNELLPGVT
Trigger: AGTGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCTAGCCCACCACTGAAAGGAAAGATCTGAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCACTTTCATAACACTTaGAATGAGTGGGGCCTATCA +
Preference number: 2 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPHFHNT*NEWGLS
Trigger: TGATAGGCCCCACTCATTTCAAGTGTTATGAAAGTG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGCCAAACAGAAACCATaGCAGGGCATATCCTTTGGC +
Preference number: 2 (lower is better)
Translates to: GQDREEREVTNVHEAYLVAKQKP*QGISFG
Trigger: GCCAAAGGATATGCCCTGTCATGGTTTCTGTTTGGC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCAGCCAGCAATTTACTaGTCAAAGATGGCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: GQDREEREVTNVHEAYLVQPAIY*SKMAEG
Trigger: CCCCTCAGCCATCTTTGAGCAGTAAATTGCTGGCTG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAGCCCTGCAATGCCCTaGGTATGTGCTACTGGCTTT +
Preference number: 2 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGSPAMP*VCATGF
Trigger: AAAGCCAGTAGCACATACGCAGGGCATTGCAGGGCT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAGGAACGAATGTAACTaGTCCGGGGTGGGGTCTCGG +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIRNECN*SGVGSR
Trigger: CCGAGACCCCACCCCGGACCAGTTACATTCGTTCCT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGCTGGGGCATGTGGCTaGGGTGAAGGTACGTTGCTA +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIAGACG*GEGTLL
Trigger: TAGCAACGTACCTTCACCCCAGCCACATGCCCCAGC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATATGCCTAAAAGCATaGGGTTTTGCTCCGGAAGCA +
Preference number: 2 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVICLKA*GFAPEA
Trigger: TGCTTCCGGAGCAAAACCTCATGCTTTTAGGCATAT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTGGGGCCTATCAGACTaGTTTCTGCCAAGGATTAAT +
Preference number: 2 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVWGLSD*FLPRIN
Trigger: ATTAATCCTTGGCAGAAAGCAGTCTGATAGGCCCCA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAAGGGAAGCCCTGCAATaGCCTGCGTATGTGCTACTG +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGREALQ*PAYVLL
Trigger: CAGTAGCACATACGCAGGGCATTGCAGGGCTTCCCT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCTGCGTATGTGCTACTaGCTTTTCCACCAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFILRMCY*LFHQGC
Trigger: GCAGCCCTGGTGGAAAAGCCAGTAGCACATACGCAG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCTTTCCTTTCAGTGGTaGGCTAGCTGGTTACCTTTG +
Preference number: 2 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLSFQW*ASWLPL
Trigger: CAAAGGTAACCAGCTAGCCCACCACTGAAAGGAAAG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCACTTTCATAACACTTaGAATGAGTGGGGCCTATCA +
Preference number: 2 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGHFHNT*NEWGLS
Trigger: TGATAGGCCCCACTCATTTCAAGTGTTATGAAAGTG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCATCAGAAAAGCACTTaGACCATCAATAGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: GQDREEREVTNVHEAYLVHQKST*TINREA
Trigger: GGCTTCCCTATTGATGGTTCAAGTGCTTTTCTGATG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATCAATAGGGAAGCCCTaGAATGCCCTGCGTATGTGC +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGSIGKP*NALRMC
Trigger: GCACATACGCAGGGCATTGCAGGGCTTCCCTATTGA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCTCCTCTGTACACTGTaGCTCTTAACTGGTTTCCAT +
Preference number: 2 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLLCTL*LLTGFH
Trigger: ATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAAAGATCAAGCAGGCTaGAGACAGGAGACCATTTCC +
Preference number: 2 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGKDQAG*RQETIS
Trigger: GGAAATGGTCTCCTGTCTCCAGCCTGCTTGATCTTT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCCTTTCCTTTCAGTGGTaGGCTAGCTGGTTACCTTTG +
Preference number: 2 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGLSFQW*ASWLPL
Trigger: CAAAGGTAACCAGCTAGCCCACCACTGAAAGGAAAG...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCAGAAATGGGATAACCTaGGGCAGGTATACGAGAAAG +
Preference number: 2 (lower is better)
Translates to: GQDREEREVTNVHEAYLVRNGIT*GRYTRK
Trigger: CTTTCTCGTATACCTGCCCCAGGTTATCCCATTTCT...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTTTTCCAATTTGTATTaGCTGGGGCATGTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGFSNLY*LGHVAG
Trigger: CCCAGCCACATGCCCCAGCCAATACAAATTGGAAAA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGGCAACACATTAAAGTaGAGACCAGTGGCTGCACCT +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIGNTLK*RPVAAP
Trigger: AGGTGCAGCCACTGGTCTTCACTTTAATGTGTTGCC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAATGCCCTGCGTATGTaGTACTGGCTTTTCCACCAG +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFINALRM*YWLFHQ
Trigger: CTGGTGGAAAAGCCAGTAGCACATACGCAGGGCATT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAAATGCCCTGCGTATGTaGTACTGGCTTTTCCACCAG +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGNALRM*YWLFHQ
Trigger: CTGGTGGAAAAGCCAGTAGCACATACGCAGGGCATT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAGAAATGGGATAACCTaGGGCAGGTATACGAGAAAG +
Preference number: 2 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGRNGIT*GRYTRK
Trigger: CTTTCTCGTATACCTGCCCCAGGTTATCCCATTTCT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGGGAAGAAAGAGAGGTaGCAAATGTACATGAAGCTT +
Preference number: 2 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGGKKER*QMYMKL
Trigger: AAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGGGGTGAAGGTACGTTaGTATTATGAAGACTGGCCA +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIGVKVR*YYEDWP
Trigger: TGGCCAGTCTTCATAATAGCAACGTACCTTCACCCC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGATCTTTCCTTTCAGTaGTGGGCTAGCTGGTTACCT +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGDLSFQ*WASWLP
Trigger: AGGTAACCAGCTAGCCCACCACTGAAAGGAAAGATC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGCCAGAAGCAGATTCTaGCAACACATTAAAGTGAAG +
Preference number: 2 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGARSRF*QHIKVK
Trigger: CTTCACTTTAATGTGTTGCCAGAATCTGCTTCTGGC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAAGCCTATGAAATCATaGAGTTTAGGGCAGGGTGTT +
Preference number: 2 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGKPMKS*SLGQGV
Trigger: AACACCCTGCCCTAAACTCCATGATTTCATAGGCTT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTGGGGCCTATCAGACTaGTTTCTGCCAAGGATTAAT +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIWGLSD*FLPRIN
Trigger: ATTAATCCTTGGCAGAAAGCAGTCTGATAGGCCCCA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACTCCTCTGTACACTGTaGCTCTTAACTGGTTTCCAT +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGLLCTL*LLTGFH
Trigger: ATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATTTACTGCTCAAAGATaGCTGAGGGGGAAGAACCAT +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGFTAQR*LRGKNH
Trigger: ATGGTTCTTCCCCCTCAGCCATCTTTGAGCAGTAAA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTTTACTGCTCAAAGATaGCTGAGGGGGAAGAACCAT +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIFTAQR*LRGKNH
Trigger: ATGGTTCTTCCCCCTCAGCCATCTTTGAGCAGTAAA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACCTTTGGCTCTCAAATaGGAATCCCATGTCTCAGAT +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGPLALK*ESHVSD
Trigger: ATCTGAGACATGGGATTCCCATTTGAGAGCCAAAGG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAAGAAATGGGATAACCTaGGGCAGGTATACGAGAAAG +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGRNGIT*GRYTRK
Trigger: CTTTCTCGTATACCTGCCCCAGGTTATCCCATTTCT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCACTTTCATAACACTTaGAATGAGTGGGGCCTATCA +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIHFHNT*NEWGLS
Trigger: TGATAGGCCCCACTCATTTCAAGTGTTATGAAAGTG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR TCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGGGAAGAAAGAGAGGTaGCAAATGTACATGAAGCTT +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGGKKER*QMYMKL
Trigger: AAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGAGACCATTTCCATTTaGTTTTGCCAGGAACGAATG +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIETISI*FCQERM
Trigger: CATTCGTTCCTGGCAAAAGCAAATGGAAATGGTCTC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATGTTGTGGGAGAGGGTaGAAAGAGAGGTTAAATGAA +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGCCGRG*KERLNE
Trigger: TTCATTTAACCTCTCTTTGCACCCTCTCCCACAACA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAAGTGCTTTTGATGCTTaGTATTTGTTGTGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGSAFDA*YLLWER
Trigger: CCTCTCCCACAACAAATACCAAGCATCAAAAGCACT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAACAAAAATGACCTCTaGATCCGAGCAGCTCAGATA +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFINKNDL*IRAAQI
Trigger: TATCTGAGCTGCTCGGATCCAGAGGTCATTTTTGTT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCATCACAGGCCAATCTaGAAAAGAAATGCCCAACAT +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIHHRPI*KRNAQH
Trigger: ATGTTGGGCATTTCTTTTCCAGATTGGCCTGTGATG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATGCTATTATGAAGACTaGCCATCTCACAGGGTTTTC +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGCYYED*PSHRVF
Trigger: GAAAACCCTGTGAGATGGCCAGTCTTCATAATAGCA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCATGGTAACCCTAAAATaGGCCAGATTTTCCAATTTG +
Preference number: 2 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGMVTLK*ARFSNL
Trigger: CAAATTGGAAAATCTGGCCCATTTTAGGGTTACCAT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAAGCCTATGAAATCATaGAGTTTAGGGCAGGGTGTT +
Preference number: 2 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIKPMKS*SLGQGV
Trigger: AACACCCTGCCCTAAACTCCATGATTTCATAGGCTT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CAA 90 bp CTCCCTGTAATCACGACAAGTATTGCTCTTAAACAAAGAACAGGATaGAGATTAGAAAGAATAACCTGTGATGAAAGATCAAGCAGGCTG +
Preference number: 2 (lower is better)
Translates to: LPVITTSIALKQRTG*RLERITCDERSSRL
Trigger: CAGCCTGCTTGATCTTTCATCACAGGTTATTCTTTCTAATCTCAATCCTGTTCTTTGTTTAAGAGCAATACTTGTCGTGATTACAGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAATGGTAACCCTAAAATaGGCCAGATTTTCCAATTTG +
Preference number: 2 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGMVTLK*ARFSNL
Trigger: CAAATTGGAAAATCTGGCCCATTTTAGGGTTACCAT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR GCA 72 bp CCATCAATAGGGAAGCCCTGCAATGCCCTGCGTATGTaGTACTGGCTTTTCCACCAGGGCTGCGGGTCCCTG +
Preference number: 3 (lower is better)
Translates to: PSIGKPCNALRM*YWLFHQGCGSL
Trigger: CAGGGACCCGCAGCCCTGGTGGAAAAGCCAGTAGCACATACGCAGGGCATTGCAGGGCTTCCCTATTGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CCA 72 bp CCCTGGCAGCACAGCCAGCAATTTACTGCTCAAAGATaGCTGAGGGGGAAGAACCATGTGGTCTTCCCCTCA +
Preference number: 3 (lower is better)
Translates to: PWQHSQQFTAQR*LRGKNHVVFPS
Trigger: TGAGGGGAAGACCACATGGTTCTTCCCCCTCAGCCATCTTTGAGCAGTAAATTGCTGGCTGTGCTGCCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CCA 72 bp GTCATCCCCATGTTGGCGACAGCCAGAAGCAGATTCTaGCAACACATTAAAGTGAAGACCAGTGGCTGCACC +
Preference number: 3 (lower is better)
Translates to: VIPMLATARSRF*QHIKVKTSGCT
Trigger: GGTGCAGCCACTGGTCTTCACTTTAATGTGTTGCCAGAATCTGCTTCTGGCTGTCGCCAACATGGGGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCATTTCCATTTGCTTTaGCCAGGAACGAATGTAACT +
Preference number: 3 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCHFHLL*PGTNVT
Trigger: AGTTACATTCGTTCCTGGCAAAAGCAAATGGAAATG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCAACCCAAAACTAAATTaGCAGATGCAGTGGGATATT +
Preference number: 3 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCNPKLN*QMQWDI
Trigger: AATATCCCACTGCATCTGCAAATTTAGTTTTGGGTT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR TCA 72 bp CATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTaGACCATCAATAGGGAAGCCCTGCAATGCCCTGCG +
Preference number: 3 (lower is better)
Translates to: HEVLLRKHQKST*TINREALQCPA
Trigger: CGCAGGGCATTGCAGGGCTTCCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR TCA 72 bp CTACCCTTCACTAGAGGGGGCTCGACATGCGAGTTATaGCCCATGTGCGTAGAACCTAATCACAGGAGTGAA +
Preference number: 3 (lower is better)
Translates to: LPFTRGGSTCEL*PMCVEPNHRSE
Trigger: TTCACTCCTGTGATTAGGTTCTACGCACATGGGTCATAACTCGCATGTCGAGCCCCCTCTAGTGAAGGGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGGGGTCATCCCCATGTaGGCGACAGCCAGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGGVIPM*ATARSR
Trigger: TCTGCTTCTGGCTGTCGCCAACATGGGGATGACCCC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGGAGACCATTTCCATTaGCTTTTGCCAGGAACGAAT +
Preference number: 3 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPGDHFH*LLPGTN
Trigger: ATTCGTTCCTGGCAAAAGCAAATGGAAATGGTCTCC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGATGCTTGGTATTTGTaGTGGGAGAGGGTGCAAAGA +
Preference number: 3 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSDAWYL*WERVQR
Trigger: TCTTTGCACCCTCTCCCACAACAAATACCAAGCATC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGATGCTTGGTATTTGTaGTGGGAGAGGGTGCAAAGA +
Preference number: 3 (lower is better)
Translates to: GQDREEREVTNVHEAYLVDAWYL*WERVQR
Trigger: TCTTTGCACCCTCTCCCACAACAAATACCAAGCATC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTTTGATGCTTGGTATTaGTTGTGGGAGAGGGTGCAA +
Preference number: 3 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVFDAWY*LWERVQ
Trigger: TTGCACCCTCTCCCACAACAAATACCAAGCATCAAA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CCA 72 bp TGGGAATCCCATGTCTCAGATCTTTCCTTTCAGTGGTaGGCTAGCTGGTTACCTTTGGTTTGTCTGTGTTTT +
Preference number: 3 (lower is better)
Translates to: WESHVSDLSFQW*ASWLPLVCLCF
Trigger: AAAACACAGACAAACCAAAGGTAACCAGCTAGCCCACCACTGAAAGGAAAGATCTGAGACATGGGATTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CCA 72 bp AGAAACCATGACAGGGCATATCCTTTGGCTCTCAAATaGGAATCCCATGTCTCAGATCTTTCCTTTCAGTGG +
Preference number: 3 (lower is better)
Translates to: RNHDRAYPLALK*ESHVSDLSFQW
Trigger: CCACTGAAAGGAAAGATCTGAGACATGGGATTCCCATTTGAGAGCCAAAGGATATGCCCTGTCATGGTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CCA 72 bp GCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATaGTATATAGAAAAGCTAGGATTGGGACAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: ARQVLGLKNPLG*YIEKLGLGQQG
Trigger: GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACATTTCCATTTGCTTTaGCCAGGAACGAATGTAACT +
Preference number: 3 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSHFHLL*PGTNVT
Trigger: AGTTACATTCGTTCCTGGCAAAAGCAAATGGAAATG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTGGTTTGTCTGTGTTTaGGTAATGAATTGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: GQDREEREVTNVHEAYLVWFVCV*VMNCCQ
Trigger: CTGGCAGCAATTCATTACCAAAACACAGACAAACCA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CCA 72 bp CATGTCTCAGATCTTTCCTTTCAGTGGTGGGCTAGCTaGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAA +
Preference number: 3 (lower is better)
Translates to: HVSDLSFQWWAS*LPLVCLCFGNE
Trigger: TTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCTAGCCCACCACTGAAAGGAAAGATCTGAGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATTCTATCCGTCTCGTTaGATTTTAGTAAGTCTGTTC +
Preference number: 3 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSFYPSR*ILVSLF
Trigger: GAACAGACTTACTAAAATCAAACGAGACGGATAGAA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTATAGAAAAGCTAGGATaGGGACAGCAGGGCAGGATA +
Preference number: 3 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIIEKLG*GQQGRI
Trigger: TATCCTGCCCTGCTGTCCCAATCCTAGCTTTTCTAT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGGAGACCATTTCCATTaGCTTTTGCCAGGAACGAAT +
Preference number: 3 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIGDHFH*LLPGTN
Trigger: ATTCGTTCCTGGCAAAAGCAAATGGAAATGGTCTCC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTTCTATCCGTCTCGTTaGATTTTAGTAAGTCTGTTC +
Preference number: 3 (lower is better)
Translates to: GQDREEREVTNVHEAYLVFYPSR*ILVSLF
Trigger: GAACAGACTTACTAAAATCAAACGAGACGGATAGAA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATTTGATGCTTGGTATTaGTTGTGGGAGAGGGTGCAA +
Preference number: 3 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGFDAWY*LWERVQ
Trigger: TTGCACCCTCTCCCACAACAAATACCAAGCATCAAA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATTAGGAAGGATCATCTaGCTAGGAATTAGGGGAGCA +
Preference number: 3 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGLGRII*LGIRGA
Trigger: TGCTCCCCTAATTCCTAGCAAGATGATCCTTCCTAA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTTAGGAAGGATCATCTaGCTAGGAATTAGGGGAGCA +
Preference number: 3 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFILGRII*LGIRGA
Trigger: TGCTCCCCTAATTCCTAGCAAGATGATCCTTCCTAA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAGCTTATCTTGTCTCTaGAGAATTCCACTGATTTGC +
Preference number: 3 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGSLSCL*RIPLIC
Trigger: GCAAATCAGTGGAATTCTCAAGAGACAAGATAAGCT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATGGTTTGTCTGTGTTTaGGTAATGAATTGCTGCCAG +
Preference number: 3 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGWFVCV*VMNCCQ
Trigger: CTGGCAGCAATTCATTACCAAAACACAGACAAACCA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACATTTCCATTTGCTTTaGCCAGGAACGAATGTAACT +
Preference number: 3 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGHFHLL*PGTNVT
Trigger: AGTTACATTCGTTCCTGGCAAAAGCAAATGGAAATG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAAGCTTATCTTGTCTCTaGAGAATTCCACTGATTTGC +
Preference number: 3 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGSLSCL*RIPLIC
Trigger: GCAAATCAGTGGAATTCTCAAGAGACAAGATAAGCT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATTCTATCCGTCTCGTTaGATTTTAGTAAGTCTGTTC +
Preference number: 3 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGFYPSR*ILVSLF
Trigger: GAACAGACTTACTAAAATCAAACGAGACGGATAGAA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAACCCAAAACTAAATTaGCAGATGCAGTGGGATATT +
Preference number: 3 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFINPKLN*QMQWDI
Trigger: AATATCCCACTGCATCTGCAAATTTAGTTTTGGGTT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCAAGCCCACACCACACTaGCAGCGAGTGACGCGTCCT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCKPTPH*QRVTRP
Trigger: AGGACGCGTCACTCGCTGTCAGTGTGGTGTGGGCTT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGTTGGGGATGCCTGCTaGAAGGGCATCTGTCCACCC +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCVGDAC*KGICPP
Trigger: GGGTGGACAGATGCCCTTGCAGCAGGCATCCCCAAC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCTTTTGGCTCGGTCTCTaGCTTGGGCCTTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCFWLGL*LGPWLA
Trigger: CGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAA...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCCGTCACACCGGTTTTaGCTCGGTCTCTGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCPSHRF*LGLCLG
Trigger: CCCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCCCGCCCGGCCTTCATaGTCTGCGCCCGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVPARPS*SAPGQT
Trigger: GGTTTGCCCGGGCGCAGAGCATGAAGGCCGGGCGGG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCATGCTTGTCACCGATaGCATGGTGGCGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCHACHR*HGGEAR
Trigger: CCTGGCTTCGCCACCATGCCATCGGTGACAAGCATG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGACCCAAGACTAGGATaGGCAGTGCTGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCDPRLG*AVLAEL
Trigger: CAGCTCAGCCAGCACTGCCCATCCTAGTCTTGGGTC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGCCTCAGGCCGTCTGTaGTCTTGGGAGCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCASGRL*SWEQKW
Trigger: CCATTTCTGCTCCCAAGACCACAGACGGCCTGAGGC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCAGCTGGAGATCTGGCTaGGGTTCGCCTGACCCTTTC +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCSWRSG*GSPDPF
Trigger: GAAAGGGTCAGGCGAACCCCAGCCAGATCTCCAGCT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCAGGAACGAATGTAACTaGTCCGGGGTGGGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCRNECN*SGVGSR
Trigger: CCGAGACCCCACCCCGGACCAGTTACATTCGTTCCT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGCTGGGGCATGTGGCTaGGGTGAAGGTACGTTGCTA +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCAGACG*GEGTLL
Trigger: TAGCAACGTACCTTCACCCCAGCCACATGCCCCAGC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGCTGCTCACTGCCTGTaGGGTGACTGGCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCAAHCL*GDWLSC
Trigger: ACAAGAAAGCCAGTCACCTCACAGGCAGTGAGCAGC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGAACCGACTAGGTCCTaGCATGCTTGTCACCGATGG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCEPTRS*HACHRW
Trigger: CCATCGGTGACAAGCATGTCAGGACCTAGTCGGTTC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCATGATCCGATCTGGATaGGGTTTTCCGGTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCMIRSG*GFPVPL
Trigger: GAGGGGCACCGGAAAACCTCATCCAGATCGGATCAT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCTTCCTTGGGAAACGCTaGTCTGCCCAGGTGACAGGT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCFLGKR*SAQVTG
Trigger: ACCTGTCACCTGGGCAGAGCAGCGTTTCCCAAGGAA...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGCCTTGGCTGGCGGTTaGAGAGAGCTGCTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCALAGG*RELLAL
Trigger: TAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCTTGTCACCGATGGCATaGTGGCGAAGCCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCLSPMA*WRSQVF
Trigger: GAAGACCTGGCTTCGCCACCATGCCATCGGTGACAA...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGACGATGAGACACACTaGCTGGTACTGGAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCDDETH*LVLESC
Trigger: ACAGGACTCCAGTACCAGTCAGTGTGTCTCATCGTC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCTCAGGGTCTACAAGTaGCAAACGCTTGTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCLRVYK*QTLVSG
Trigger: TCCCGAGACAAGCGTTTGGCACTTGTAGACCCTGAG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCACACTGACTGGTACTaGAGTCCTGTTTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCHTDWY*SPVWLG
Trigger: ACCCAGCCAAACAGGACTCCAGTACCAGTCAGTGTG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGCTCGGTCTCTGCCTTaGGCCTTGGCTGGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVARSLP*ALAGGC
Trigger: GCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTACCGTGGGGTCACTCTaGGGCTGCCGTCCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVTVGSL*GCRPAF
Trigger: AAAGGCGGGACGGCAGCCCCAGAGTGACCCCACGGT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCAAGGTTGGTCCTCAGTaGGATCAGGAAGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCKVGPQ*DQEEEK
Trigger: CTTCTCCTCTTCCTGATCTCACTGAGGACCAACCTT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCAACATGACATGCTCTaGGGCCACTTGGCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCQHDML*GHLARN
Trigger: ATTTCTGGCCAAGTGGCCTCAGAGCATGTCATGTTG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGGGCCGGGAGAGCACTaGCTGGCCTTCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPGPGEH*LAFRGS
Trigger: AGAGCCTCTGAAGGCCAGTCAGTGCTCTCCCGGCCC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGCCAAACAGAAACCATaGCAGGGCATATCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCAKQKP*QGISFG
Trigger: GCCAAAGGATATGCCCTGTCATGGTTTCTGTTTGGC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGGCAACACATTAAAGTaGAGACCAGTGGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCGNTLK*RPVAAP
Trigger: AGGTGCAGCCACTGGTCTTCACTTTAATGTGTTGCC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCTTGCAGAGAGCTGCTTaGTTTACTGCCATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCLQRAA*FTAMLV
Trigger: GACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAA...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCAATGCCCTGCGTATGTaGTACTGGCTTTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCNALRM*YWLFHQ
Trigger: CTGGTGGAAAAGCCAGTAGCACATACGCAGGGCATT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCCTGCCCTGGCAGTGTaGTGCTCAAGAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVPALAV*CSRAQG
Trigger: TCCCTGGGCTCTTGAGCACCACACTGCCAGGGCAGG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGCCTTGGGCCTTGGCTaGCGGTTGCAGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVALGLG*RLQRAA
Trigger: AGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCTCTGCCTTGGGCCTTaGCTGGCGGTTGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVLCLGP*LAVAES
Trigger: GCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCCAATGTCTGTTCAGTaGTATTGGCCTCTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCPMSVQ*YWPLAR
Trigger: CCTTGCAAGAGGCCAATATCACTGAACAGACATTGG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGAAACTGGAAGACGATaGGACACACTGACTGGTACT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCETGRR*DTLTGT
Trigger: AGTACCAGTCAGTGTGTCTCATCGTCTTCCAGTTTC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCTTGCTCTCAGTACCATaGTCCGATCTGGATGAGGTT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCLLSVP*SDLDEV
Trigger: AACCTCATCCAGATCGGATCATGGTACTGAGAGCAA...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTGTCAACGGGGTTTCTaGGCCATCGCAACAGGGGCG +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVCQRGF*AIATGA
Trigger: CGCCCCTGTTGCGATGGCGCAGAAACCCCGTTGACA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCATTGCTTGCAAACGATaGTCCAACAGGCACATGCGT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCIACKR*SNRHMR
Trigger: ACGCATGTGCCTGTTGGAGCATCGTTTGCAAGCAAT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGATGAGGTTTTCCGGTaGCCCTCAGGGCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPDEVFR*PSGPGE
Trigger: CTCTCCCGGCCCTGAGGGGCACCGGAAAACCTCATC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCACGTCATCTCCAAGTaGGAATCTGCTAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCHVISK*ESARML
Trigger: AAGCATCCTAGCAGATTCGCACTTGGAGATGACGTG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGGGTCACTCTGGGGCTaGCGTCCCGCCTTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVGSLWG*RPAFLS
Trigger: ACTCAAAAAGGCGGGACGGCAGCCCCAGAGTGACCC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGGGGTGAAGGTACGTTaGTATTATGAAGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCGVKVR*YYEDWP
Trigger: TGGCCAGTCTTCATAATAGCAACGTACCTTCACCCC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACCGGCCTTCATGCTCTaGGCCCGGGCAAACCGCTCG +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSPAFML*ARANRS
Trigger: CGAGCGGTTTGCCCGGGCGCAGAGCATGAAGGCCGG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCCTGCCCTGGCAGTGTaGTGCTCAAGAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPPALAV*CSRAQG
Trigger: TCCCTGGGCTCTTGAGCACCACACTGCCAGGGCAGG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGCCTTGGGCCTTGGCTaGCGGTTGCAGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPALGLG*RLQRAA
Trigger: AGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCACAACACCTTCACTGTaGTCCGGGATGAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCTTPSL*SGMNFS
Trigger: GGAAAAGTTCATCCCGGACCACAGTGAAGGTGTTGT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCTTTCCTTTCAGTGGTaGGCTAGCTGGTTACCTTTG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCLSFQW*ASWLPL
Trigger: CAAAGGTAACCAGCTAGCCCACCACTGAAAGGAAAG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGGGCCGGGAGAGCACTaGCTGGCCTTCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSGPGEH*LAFRGS
Trigger: AGAGCCTCTGAAGGCCAGTCAGTGCTCTCCCGGCCC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCATCAGAAAAGCACTTaGACCATCAATAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCHQKST*TINREA
Trigger: GGCTTCCCTATTGATGGTTCAAGTGCTTTTCTGATG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTAAGCCCACACCACACTaGCAGCGAGTGACGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPKPTPH*QRVTRP
Trigger: AGGACGCGTCACTCGCTGTCAGTGTGGTGTGGGCTT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCACTGGCATCCAAATATaGCTCTTCTGCCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCTGIQI*LFCQCL
Trigger: CAGACATTGGCAGAAGAGGCATATTTGGATGCCAGT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCAATACTGCCCCCAGTaGTGCTCACTGCCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVQYCPQ*CSLPVR
Trigger: CCTCACAGGCAGTGAGCAGCACTGGGGGCAGTATTG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGTTGGGGATGCCTGCTaGAAGGGCATCTGTCCACCC +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPVGDAC*KGICPP
Trigger: GGGTGGACAGATGCCCTTGCAGCAGGCATCCCCAAC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCCAGGGATCTGTGCTTaGCTCAGGCCGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPPGICA*LRPSVV
Trigger: GACCACAGACGGCCTGAGGCAAGCACAGATCCCTGG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTTTTGGCTCGGTCTCTaGCTTGGGCCTTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPFWLGL*LGPWLA
Trigger: CGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGTTTTGGTAATGAATTaGTGCCAGGGGTCACTACTG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCVLVMN*CQGSLL
Trigger: CAGTAGTGACCCCTGGCAGCAATTCATTACCAAAAC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGCTTGTGCAAACTGTTaGCTTGAACCTATACTGGCA +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCACANC*LEPILA
Trigger: TGCCAGTATAGGTTCAAGCCAACAGTTTGCACAAGC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCTGGACAGCAGTATTCTaGTTGTTAAGCATCGGTCCA +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCWTAVF*LLSIGP
Trigger: TGGACCGATGCTTAACAACCAGAATACTGCTGTCCA...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGTCACAGTGTGGGCTTaGTCCCTCTGCAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVVTVWA*SLCNCW
Trigger: CCAGCAGTTGCAGAGGGACCAAGCCCACACTGTGAC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCTTCTTCAGTGGGCATaGAGCCCTGGCACACGTGGT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVLLQWA*SPGTRG
Trigger: ACCACGTGTGCCAGGGCTCCATGCCCACTGAAGAAG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGAGGCTCTCTCCGGCTaGCCTTCTCTTCAGACGTGC +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPEALSG*PSLQTC
Trigger: GCACGTCTGAAGAGAAGGCCAGCCGGAGAGAGCCTC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCGGGAGAGCACTGACTaGCCTTCAGAGGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPRESTD*PSEALS
Trigger: GGAGAGAGCCTCTGAAGGCCAGTCAGTGCTCTCCCG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCAGAAATGGGATAACCTaGGGCAGGTATACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCRNGIT*GRYTRK
Trigger: CTTTCTCGTATACCTGCCCCAGGTTATCCCATTTCT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CAA 72 bp AGCAGGCTGGAGACAGGAGACCATTTCCATTTGCTTTaGCCAGGAACGAATGTAACTGGTCCGGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SRLETGDHFHLL*PGTNVTGPGWG
Trigger: ACCCCACCCCGGACCAGTTACATTCGTTCCTGGCAAAAGCAAATGGAAATGGTCTCCTGTCTCCAGCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTGGAAAGGGCAGTTGTaGACGGCAGTTGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVWKGQL*TAVGRR
Trigger: CCTACGTCCAACTGCCGTTCACAACTGCCCTTTCCA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394168.1
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGAACTGACTTTGGGGTaGGTGAGGTTGGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPELTLG*VRLAHG
Trigger: CCCATGGGCCAACCTCACGCACCCCAAAGTCAGTTC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTTCCTTGGGAAACGCTaGTCTGCCCAGGTGACAGGT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVFLGKR*SAQVTG
Trigger: ACCTGTCACCTGGGCAGAGCAGCGTTTCCCAAGGAA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTAGCTGCTTGCTTTACTaGCATGCTGGTCACTCCGGC +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVSCLLY*HAGHSG
Trigger: GCCGGAGTGACCAGCATGGCAGTAAAGCAAGCAGCT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGATGAGGTTTTCCGGTaGCCCTCAGGGCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSDEVFR*PSGPGE
Trigger: CTCTCCCGGCCCTGAGGGGCACCGGAAAACCTCATC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCTTTTCCACCAGGGCTaGGGGTCCCTGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLFHQG*GSLAAQ
Trigger: CTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTAGGGAAGCCCTGCAATaGCCTGCGTATGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVREALQ*PAYVLL
Trigger: CAGTAGCACATACGCAGGGCATTGCAGGGCTTCCCT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGAAAAAGGGGAAATCTaGAACTTGGACATTGGCACA +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCEKGEI*NLDIGT
Trigger: TGTGCCAATGTCCAAGTTGCAGATTTCCCCTTTTTC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGTGGCAGTCCATCACTaGGCCCTTCTCCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPVAVHH*ALLQAG
Trigger: ACCAGCTTGGAGAAGGGCCCAGTGATGGACTGCCAC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCATGCTTGTCACCGATaGCATGGTGGCGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPHACHR*HGGEAR
Trigger: CCTGGCTTCGCCACCATGCCATCGGTGACAAGCATG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTCTGGTGTCACAGTGTaGGCTTGGTCCCTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVSGVTV*AWSLCN
Trigger: GTTGCAGAGGGACCAAGCCCACACTGTGACACCAGA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCTTCTTCAGTGGGCATaGAGCCCTGGCACACGTGGT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPLLQWA*SPGTRG
Trigger: ACCACGTGTGCCAGGGCTCCATGCCCACTGAAGAAG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCTCTGCCTTGGGCCTTaGCTGGCGGTTGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLCLGP*LAVAES
Trigger: GCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCTGCGTATGTGCTACTaGCTTTTCCACCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVLRMCY*LFHQGC
Trigger: GCAGCCCTGGTGGAAAAGCCAGTAGCACATACGCAG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCAGTGCTTTTGATGCTTaGTATTTGTTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCSAFDA*YLLWER
Trigger: CCTCTCCCACAACAAATACCAAGCATCAAAAGCACT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGCCAGAAGCAGATTCTaGCAACACATTAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCARSRF*QHIKVK
Trigger: CTTCACTTTAATGTGTTGCCAGAATCTGCTTCTGGC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCATCACAGGCCAATCTaGAAAAGAAATGCCCAACAT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCHHRPI*KRNAQH
Trigger: ATGTTGGGCATTTCTTTTCCAGATTGGCCTGTGATG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGCTGGGGCATGTGGCTaGGGTGAAGGTACGTTGCTA +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPAGACG*GEGTLL
Trigger: TAGCAACGTACCTTCACCCCAGCCACATGCCCCAGC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACAGCTGCGGAGGGAGTaGCCGGGACCGAGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGQLRRE*PGPSSG
Trigger: CCCCGAGCTCGGTCCCGGCCACTCCCTCCGCAGCTG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614467.4
CDS-3UTR TCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGAAACATTAGAAGCCTaGGTAAAGGATGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCETLEA*VKDADE
Trigger: TTCATCAGCATCCTTTACTCAGGCTTCTAATGTTTC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCCCTCCACTCACATTTaGTGGGGCTTGCTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGPSTHI*WGLLPA
Trigger: AGCGGGCAGCAAGCCCCATCAAATGTGAGTGGAGGG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGCTGCTCACTGCCTGTaGGGTGACTGGCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPAAHCL*GDWLSC
Trigger: ACAAGAAAGCCAGTCACCTCACAGGCAGTGAGCAGC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGAACCGACTAGGTCCTaGCATGCTTGTCACCGATGG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPEPTRS*HACHRW
Trigger: CCATCGGTGACAAGCATGTCAGGACCTAGTCGGTTC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGACGATGAGACACACTaGCTGGTACTGGAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVDDETH*LVLESC
Trigger: ACAGGACTCCAGTACCAGTCAGTGTGTCTCATCGTC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTGGCTGGGGTTCGCCTaGCCCTTTCATGATGTCTGT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPWLGFA*PFHDVC
Trigger: ACAGACATCATGAAAGGGTCAGGCGAACCCCAGCCA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGGCATGTGGCTGGGGTaGAGGTACGTTGCTATTATG +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVGMWLG*RYVAIM
Trigger: CATAATAGCAACGTACCTTCACCCCAGCCACATGCC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGTTGGGGATGCCTGCTaGAAGGGCATCTGTCCACCC +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSVGDAC*KGICPP
Trigger: GGGTGGACAGATGCCCTTGCAGCAGGCATCCCCAAC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTACAGTTGGGGATGCCTaGTGCAAGGGCATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPTVGDA*CKGICP
Trigger: TGGACAGATGCCCTTGCAGCAGGCATCCCCAACTGT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTGGGAAACGCTGCTCTaGCCAGGTGACAGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVWETLL*PGDRCN
Trigger: ATTACACCTGTCACCTGGGCAGAGCAGCGTTTCCCA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACCAGGGATCTGTGCTTaGCTCAGGCCGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSPGICA*LRPSVV
Trigger: GACCACAGACGGCCTGAGGCAAGCACAGATCCCTGG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCGAGCCCAGGGATCTGTaGTTGCCTCAGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVEPRDL*LPQAVC
Trigger: ACAGACGGCCTGAGGCAAGCACAGATCCCTGGGCTC...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTTGCTTCCAGAATCCTaGCCTGGCAGTGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPLLPES*PGSVVL
Trigger: GAGCACCACACTGCCAGGGCAGGATTCTGGAAGCAA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCTCAGGGTCTACAAGTaGCAAACGCTTGTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVLRVYK*QTLVSG
Trigger: TCCCGAGACAAGCGTTTGGCACTTGTAGACCCTGAG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTTTTGGCTCGGTCTCTaGCTTGGGCCTTGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGFWLGL*LGPWLA
Trigger: CGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGATGAGGTTTTCCGGTaGCCCTCAGGGCCGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVDEVFR*PSGPGE
Trigger: CTCTCCCGGCCCTGAGGGGCACCGGAAAACCTCATC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCTTTTCCACCAGGGCTaGGGGTCCCTGGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLFHQG*GSLAAQ
Trigger: CTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTAGGGAAGCCCTGCAATaGCCTGCGTATGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPREALQ*PAYVLL
Trigger: CAGTAGCACATACGCAGGGCATTGCAGGGCTTCCCT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTCAATAGGGAAGCCCTaGAATGCCCTGCGTATGTGC +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVSIGKP*NALRMC
Trigger: GCACATACGCAGGGCATTGCAGGGCTTCCCTATTGA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGTGAAGACCAGTGGCTaGACCTCCAGAGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSVKTSG*TSRARE
Trigger: CTCCCTGGCTCTGGAGGTGCAGCCACTGGTCTTCAC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGTGAAGACCAGTGGCTaGACCTCCAGAGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGVKTSG*TSRARE
Trigger: CTCCCTGGCTCTGGAGGTGCAGCCACTGGTCTTCAC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCGTGAAGACCAGTGGCTaGACCTCCAGAGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVVKTSG*TSRARE
Trigger: CTCCCTGGCTCTGGAGGTGCAGCCACTGGTCTTCAC...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTACCTGCACAGCTGGATaGCCAGGAGATGATCCAACT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVTCTAG*PGDDPT
Trigger: AGTTGGATCATCTCCTGGCCATCCAGCTGTGCAGGT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGCTTTACTGCCATGCTaGTCACTCCGGCCAAACTGT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVALLPC*SLRPNC
Trigger: ACAGTTTGGCCGGAGTGACCAGCATGGCAGTAAAGC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCTCTGCCTTGGGCCTTaGCTGGCGGTTGCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLCLGP*LAVAES
Trigger: GCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCGGGAGAGCACTGACTaGCCTTCAGAGGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVRESTD*PSEALS
Trigger: GGAGAGAGCCTCTGAAGGCCAGTCAGTGCTCTCCCG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCGGGAGAGCACTGACTaGCCTTCAGAGGCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGRESTD*PSEALS
Trigger: GGAGAGAGCCTCTGAAGGCCAGTCAGTGCTCTCCCG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCACCGTGGGGTCACTCTaGGGCTGCCGTCCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGTVGSL*GCRPAF
Trigger: AAAGGCGGGACGGCAGCCCCAGAGTGACCCCACGGT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCAGCTGCTTCTAAAATaGAGTCAGTTTCTACAACAC +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCQLLLK*SQFLQH
Trigger: GTGTTGTAGAAACTGACTCCATTTTAGAAGCAGCTG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCTGCGTATGTGCTACTaGCTTTTCCACCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPLRMCY*LFHQGC
Trigger: GCAGCCCTGGTGGAAAAGCCAGTAGCACATACGCAG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTCACTGCCTGTGAGGTaGCTGGCTTTCTTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVSLPVR*LAFLCS
Trigger: AGAACACAAGAAAGCCAGTCACCTCACAGGCAGTGA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCACTGTGGTCCGGGATaGACTTTTCCAGGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVHCGPG*TFPGSF
Trigger: AAAACTGCCTGGAAAAGTTCATCCCGGACCACAGTG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATTGGCCATCCGAGGCTaGGCTCTCCTACCCTTCACT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSLAIRG*ALLPFT
Trigger: AGTGAAGGGTAGGAGAGCTCAGCCTCGGATGGCCAA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTTGGCCATCCGAGGCTaGGCTCTCCTACCCTTCACT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLAIRG*ALLPFT
Trigger: AGTGAAGGGTAGGAGAGCTCAGCCTCGGATGGCCAA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCAATACTGCCCCCAGTaGTGCTCACTGCCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGQYCPQ*CSLPVR
Trigger: CCTCACAGGCAGTGAGCAGCACTGGGGGCAGTATTG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTGGGAAACGCTGCTCTaGCCAGGTGACAGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPWETLL*PGDRCN
Trigger: ATTACACCTGTCACCTGGGCAGAGCAGCGTTTCCCA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCCAGGGATCTGTGCTTaGCTCAGGCCGTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVPGICA*LRPSVV
Trigger: GACCACAGACGGCCTGAGGCAAGCACAGATCCCTGG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGAGCCCAGGGATCTGTaGTTGCCTCAGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVEPRDL*LPQAVC
Trigger: ACAGACGGCCTGAGGCAAGCACAGATCCCTGGGCTC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGCCCTGGCAGTGTGGTaGTCAAGAGCCCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVALAVW*SRAQGS
Trigger: AGATCCCTGGGCTCTTGAGCACCACACTGCCAGGGC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTGGTCCCTCTGCAACTaGTGGAGAATGAAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVWSLCN*WRMKAP
Trigger: AGGAGCTTTCATTCTCCAGCAGTTGCAGAGGGACCA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGCGGTTGCAGAGAGCTaGTTGCTTTACTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPAVAES*LLYCHA
Trigger: AGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCCTTCTCTTCAGACGTaGTCTGGTACTGCACTAAGC +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVPSLQT*SGTALS
Trigger: GCTTAGTGCAGTACCAGAGCACGTCTGAAGAGAAGG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGGGTCACTCTGGGGCTaGCGTCCCGCCTTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVGSLWG*RPAFLS
Trigger: ACTCAAAAAGGCGGGACGGCAGCCCCAGAGTGACCC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTAATGCCCTGCGTATGTaGTACTGGCTTTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVNALRM*YWLFHQ
Trigger: CTGGTGGAAAAGCCAGTAGCACATACGCAGGGCATT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTCAATAGGGAAGCCCTaGAATGCCCTGCGTATGTGC +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPSIGKP*NALRMC
Trigger: GCACATACGCAGGGCATTGCAGGGCTTCCCTATTGA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCATAGTTCAATGCTTGTaGGTCTCCAATAAGATCAAG +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCIVQCL*VSNKIK
Trigger: CTTGATCTTATTGGAGACCCACAAGCATTGAACTAT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGACCCAAGACTAGGATaGGCAGTGCTGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSDPRLG*AVLAEL
Trigger: CAGCTCAGCCAGCACTGCCCATCCTAGTCTTGGGTC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTACTGGAGTCCTGTTTaGCTGGGTCAGCTGATCTCC +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPYWSPV*LGQLIS
Trigger: GGAGATCAGCTGACCCAGCCAAACAGGACTCCAGTA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTCTTCAGACGTGCTCTaGTACTGCACTAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVSSDVL*YCTKPT
Trigger: AGTGGGCTTAGTGCAGTACCAGAGCACGTCTGAAGA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGAGGCTCTCTCCGGCTaGCCTTCTCTTCAGACGTGC +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVEALSG*PSLQTC
Trigger: GCACGTCTGAAGAGAAGGCCAGCCGGAGAGAGCCTC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTACCATGATCCGATCTaGATGAGGTTTTCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVYHDPI*MRFSGA
Trigger: GGCACCGGAAAACCTCATCCAGATCGGATCATGGTA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTAAGCTCTTTGTCAGCTaGAGATCTGGCTGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPKLFVS*RSGWGS
Trigger: CGAACCCCAGCCAGATCTCCAGCTGACAAAGAGCTT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CAA 72 bp AGATCAAGCAGGCTGGAGACAGGAGACCATTTCCATTaGCTTTTGCCAGGAACGAATGTAACTGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: RSSRLETGDHFH*LLPGTNVTGPG
Trigger: CCCCGGACCAGTTACATTCGTTCCTGGCAAAAGCAAATGGAAATGGTCTCCTGTCTCCAGCCTGCTTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
3UTR CAA 72 bp ATGCCCAACATGATGACAATGGGGGTCATCCCCATGTaGGCGACAGCCAGAAGCAGATTCTGGCAACACATT +
Preference number: 4 (lower is better)
Translates to: MPNMMTMGVIPM*ATARSRFWQHI
Trigger: AATGTGTTGCCAGAATCTGCTTCTGGCTGTCGCCAACATGGGGATGACCCCCATTGTCATCATGTTGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTCACTGCCTGTGAGGTaGCTGGCTTTCTTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPSLPVR*LAFLCS
Trigger: AGAACACAAGAAAGCCAGTCACCTCACAGGCAGTGA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCAACATGACATGCTCTaGGGCCACTTGGCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPQHDML*GHLARN
Trigger: ATTTCTGGCCAAGTGGCCTCAGAGCATGTCATGTTG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGGGCCGGGAGAGCACTaGCTGGCCTTCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIGPGEH*LAFRGS
Trigger: AGAGCCTCTGAAGGCCAGTCAGTGCTCTCCCGGCCC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAATGATCCGATCTGGATaGGGTTTTCCGGTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSMIRSG*GFPVPL
Trigger: GAGGGGCACCGGAAAACCTCATCCAGATCGGATCAT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATGATCCGATCTGGATaGGGTTTTCCGGTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVMIRSG*GFPVPL
Trigger: GAGGGGCACCGGAAAACCTCATCCAGATCGGATCAT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTCGACATGCGAGTTATaGCCCATGTGCGTAGAACCT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPSTCEL*PMCVEP
Trigger: AGGTTCTACGCACATGGGTCATAACTCGCATGTCGA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTTGGCCATCCGAGGCTaGGCTCTCCTACCCTTCACT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLAIRG*ALLPFT
Trigger: AGTGAAGGGTAGGAGAGCTCAGCCTCGGATGGCCAA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTATGAACCTGAACAACTaGATGTTGGCCATCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPMNLNN*MLAIRG
Trigger: GCCTCGGATGGCCAACATTCAGTTGTTCAGGTTCAT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAAGCCCACACCACACTaGCAGCGAGTGACGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGKPTPH*QRVTRP
Trigger: AGGACGCGTCACTCGCTGTCAGTGTGGTGTGGGCTT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTGTCAACGGGGTTTCTaGGCCATCGCAACAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGCQRGF*AIATGA
Trigger: CGCCCCTGTTGCGATGGCGCAGAAACCCCGTTGACA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTACATTTGATGGGGCTTaGTGCCCGCTGCCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPTFDGA*CPLPFN
Trigger: ATTAAAGGGCAGCGGGCAGCAAGCCCCATCAAATGT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTAACGGTAACAGGCTGTaGTACTGGACTGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVNGNRL*YWTGTR
Trigger: TCTAGTTCCAGTCCAGTAGCACAGCCTGTTACCGTT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGAACTGACTTTGGGGTaGGTGAGGTTGGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVELTLG*VRLAHG
Trigger: CCCATGGGCCAACCTCACGCACCCCAAAGTCAGTTC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCCAACTACTTTTTCCTaGTGTGGTTGTGCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVPTTFS*CGCAVP
Trigger: AGGAACCGCACAACCACAGCAGGAAAAAGTAGTTGG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAGCTGCTTGCTTTACTaGCATGCTGGTCACTCCGGC +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSSCLLY*HAGHSG
Trigger: GCCGGAGTGACCAGCATGGCAGTAAAGCAAGCAGCT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGAGCTGCTTGCTTTACTaGCATGCTGGTCACTCCGGC +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGSCLLY*HAGHSG
Trigger: GCCGGAGTGACCAGCATGGCAGTAAAGCAAGCAGCT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCGCCTTGGCTGGCGGTTaGAGAGAGCTGCTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVALAGG*RELLAL
Trigger: TAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGC...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGGGGTGAAGGTACGTTaGTATTATGAAGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVGVKVR*YYEDWP
Trigger: TGGCCAGTCTTCATAATAGCAACGTACCTTCACCCC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCCAACTACTGAGCCCTaGGGTGAGCTTGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGPTTEP*GELAEA
Trigger: TGCTTCTGCAAGCTCACCCCAGGGCTCAGTAGTTGG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCCAACTACTGAGCCCTaGGGTGAGCTTGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVPTTEP*GELAEA
Trigger: TGCTTCTGCAAGCTCACCCCAGGGCTCAGTAGTTGG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCTTTCTTGTGTTCTGTTaGTTTACAATGTTCACAGAC +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCFLVFC*FTMFTD
Trigger: GTCTGTGAACATTGTAAACCAACAGAACACAAGAAA...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTGCCCATTTATAGTCTaGACGTGGTGTACCGAGTTG +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVCPFIV*TWCTEL
Trigger: CAACTCGGTACACCACGTCCAGACTATAAATGGGCA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGAAGCCAGGTCTTCCTTaGGAAACGCTGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGKPGLP*ETLLCP
Trigger: TGGGCAGAGCAGCGTTTCCCAAGGAAGACCTGGCTT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTCACCGATGGCATGGTaGCGAAGCCAGGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVSPMAW*RSQVFL
Trigger: AAGGAAGACCTGGCTTCGCCACCATGCCATCGGTGA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATTGTCACCGATGGCATaGTGGCGAAGCCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSLSPMA*WRSQVF
Trigger: GAAGACCTGGCTTCGCCACCATGCCATCGGTGACAA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTCCAGAATCCTGCCCTaGCAGTGTGGTGCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGSRILP*QCGAQE
Trigger: CTCTTGAGCACCACACTGCCAGGGCAGGATTCTGGA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATCCAGAATCCTGCCCTaGCAGTGTGGTGCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSSRILP*QCGAQE
Trigger: CTCTTGAGCACCACACTGCCAGGGCAGGATTCTGGA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGTCACAGTGTGGGCTTaGTCCCTCTGCAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVVTVWA*SLCNCW
Trigger: CCAGCAGTTGCAGAGGGACCAAGCCCACACTGTGAC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATCTGGTGTCACAGTGTaGGCTTGGTCCCTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSSGVTV*AWSLCN
Trigger: GTTGCAGAGGGACCAAGCCCACACTGTGACACCAGA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGCTCGGTCTCTGCCTTaGGCCTTGGCTGGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIARSLP*ALAGGC
Trigger: GCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGCTCGGTCTCTGCCTTaGGCCTTGGCTGGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGARSLP*ALAGGC
Trigger: GCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTCTTCAGACGTGCTCTaGTACTGCACTAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPSSDVL*YCTKPT
Trigger: AGTGGGCTTAGTGCAGTACCAGAGCACGTCTGAAGA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGAGGCTCTCTCCGGCTaGCCTTCTCTTCAGACGTGC +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGEALSG*PSLQTC
Trigger: GCACGTCTGAAGAGAAGGCCAGCCGGAGAGAGCCTC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTACCGTGGGGTCACTCTaGGGCTGCCGTCCCGCCTTT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFITVGSL*GCRPAF
Trigger: AAAGGCGGGACGGCAGCCCCAGAGTGACCCCACGGT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCGGGTCATCCCCATGTTaGCGACAGCCAGAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVGSSPC*RQPEAD
Trigger: ATCTGCTTCTGGCTGTCGCCAACATGGGGATGACCC...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGGGTCATCCCCATGTTaGCGACAGCCAGAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSGSSPC*RQPEAD
Trigger: ATCTGCTTCTGGCTGTCGCCAACATGGGGATGACCC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCATTTTCCCAAATCTTTaGCTGTATTGCAATGGTTGT +
Preference number: 4 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCIFPNL*LYCNGC
Trigger: ACAACCATTGCAATACAGCCAAAGATTTGGGAAAAT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000394168.1
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCCAAGCTTCTTCAGGTaGAATCGCTGGGCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPPSFFR*NRWAFC
Trigger: ACAAAAAGCCCAGCGATTTCACCTGAAGAAGCTTGG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCCAATGTCTGTTCAGTaGTATTGGCCTCTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPPMSVQ*YWPLAR
Trigger: CCTTGCAAGAGGCCAATATCACTGAACAGACATTGG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTGGCCCATGGGGGAATaGATAACAATACTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGWPMGE*ITILPP
Trigger: TGGGGGCAGTATTGTTATTCATTCCCCCATGGGCCA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATTTTGTCCTCCCGAATaGCTCTCCACCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSFCPPE*LSTCTA
Trigger: AGCTGTGCAGGTGGAGAGTCATTCGGGAGGACAAAA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCTCTTTCCTCCTGGTTaGACATCCTATCGATCATCA +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVLFPPG*TSYRSS
Trigger: TGATGATCGATAGGATGTTCAACCAGGAGGAAAGAG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTTGCTCTCAGTACCATaGTCCGATCTGGATGAGGTT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPLLSVP*SDLDEV
Trigger: AACCTCATCCAGATCGGATCATGGTACTGAGAGCAA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGTCATGAAAAAGCAGTaGCTTGTCAACGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVVMKKQ*LVNGVS
Trigger: AGAAACCCCGTTGACAAGGCACTGCTTTTTCATGAC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGCTCCAACAGGCACATaGGTCACCCCTATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGAPTGT*VTPIGC
Trigger: GCAGCCTATAGGGGTGACGCATGTGCCTGTTGGAGC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGTACACCCACTGTATTaGTTGCAAACGATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVVHPLY*LQTMLQ
Trigger: TTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTAC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGAACTGACTTTGGGGTaGGTGAGGTTGGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGELTLG*VRLAHG
Trigger: CCCATGGGCCAACCTCACGCACCCCAAAGTCAGTTC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTGGGAAACGCTGCTCTaGCCAGGTGACAGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVWETLL*PGDRCN
Trigger: ATTACACCTGTCACCTGGGCAGAGCAGCGTTTCCCA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTTGCTTCCAGAATCCTaGCCTGGCAGTGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLLPES*PGSVVL
Trigger: GAGCACCACACTGCCAGGGCAGGATTCTGGAAGCAA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCTTGCTTTACTGCCATaGTGGTCACTCCGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGLALLP*WSLRPN
Trigger: GTTTGGCCGGAGTGACCAGCATGGCAGTAAAGCAAG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCTTGCTTTACTGCCATaGTGGTCACTCCGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLALLP*WSLRPN
Trigger: GTTTGGCCGGAGTGACCAGCATGGCAGTAAAGCAAG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGCGGTTGCAGAGAGCTaGTTGCTTTACTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGAVAES*LLYCHA
Trigger: AGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGGATGCTTGACAGTTTaGTCTCAGTACCATGATCCG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPGCLTV*SQYHDP
Trigger: CGGATCATGGTACTGAGAGCAAACTGTCAAGCATCC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGCCCTGCAATGCCCTaGGTATGTGCTACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVSPAMP*VCATGF
Trigger: AAAGCCAGTAGCACATACGCAGGGCATTGCAGGGCT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCAGGGAAGCCCTGCAATaGCCTGCGTATGTGCTACTG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVREALQ*PAYVLL
Trigger: CAGTAGCACATACGCAGGGCATTGCAGGGCTTCCCT...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTCAATAGGGAAGCCCTaGAATGCCCTGCGTATGTGC +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGSIGKP*NALRMC
Trigger: GCACATACGCAGGGCATTGCAGGGCTTCCCTATTGA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGGCCCTTCTCCAAGCTaGTTGCTTACACCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGGPSPS*LLTPLR
Trigger: CCTCAAAGGTGTAAGCAACCAGCTTGGAGAAGGGCC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGCTTGTGCAAACTGTTaGCTTGAACCTATACTGGCA +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVACANC*LEPILA
Trigger: TGCCAGTATAGGTTCAAGCCAACAGTTTGCACAAGC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCATCGGTCCAGTATATaGTTGGTTGGTCCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPHRSSI*LVGPEH
Trigger: ATGCTCAGGACCAACCAACCATATACTGGACCGATG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTGCCCAGACACTAAGTaGACAGCAGTATTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPCPDTK*TAVFWL
Trigger: CAACCAGAATACTGCTGTCCACTTAGTGTCTGGGCA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTATGATTGGCTATCACTaGACTTCCAGAGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVMIGYH*TSRGSK
Trigger: TTTGCTGCCTCTGGAAGTCCAGTGATAGCCAATCAT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTCACCGATGGCATGGTaGCGAAGCCAGGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVSPMAW*RSQVFL
Trigger: AAGGAAGACCTGGCTTCGCCACCATGCCATCGGTGA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTACTGGAGTCCTGTTTaGCTGGGTCAGCTGATCTCC +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGYWSPV*LGQLIS
Trigger: GGAGATCAGCTGACCCAGCCAAACAGGACTCCAGTA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCAGAAGAATTGTTGCTaGGTTCCTGTTCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPQKNCC*VPVPGV
Trigger: CACACCTGGAACAGGAACCCAGCAACAATTCTTCTG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGCCTCAGGCCGTCTGTaGTCTTGGGAGCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGASGRL*SWEQKW
Trigger: CCATTTCTGCTCCCAAGACCACAGACGGCCTGAGGC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGTCACAGTGTGGGCTTaGTCCCTCTGCAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGVTVWA*SLCNCW
Trigger: CCAGCAGTTGCAGAGGGACCAAGCCCACACTGTGAC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGCTTTACTGCCATGCTaGTCACTCCGGCCAAACTGT +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGALLPC*SLRPNC
Trigger: ACAGTTTGGCCGGAGTGACCAGCATGGCAGTAAAGC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGCTTTACTGCCATGCTaGTCACTCCGGCCAAACTGT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSALLPC*SLRPNC
Trigger: ACAGTTTGGCCGGAGTGACCAGCATGGCAGTAAAGC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGCCTTGGGCCTTGGCTaGCGGTTGCAGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIALGLG*RLQRAA
Trigger: AGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAGCTGGAGATCTGGCTaGGGTTCGCCTGACCCTTTC +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGSWRSG*GSPDPF
Trigger: GAAAGGGTCAGGCGAACCCCAGCCAGATCTCCAGCT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAGGAACGAATGTAACTaGTCCGGGGTGGGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGRNECN*SGVGSR
Trigger: CCGAGACCCCACCCCGGACCAGTTACATTCGTTCCT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGATCTTTCCTTTCAGTaGTGGGCTAGCTGGTTACCT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPDLSFQ*WASWLP
Trigger: AGGTAACCAGCTAGCCCACCACTGAAAGGAAAGATC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCAGGGCCAAGAGTTCTaGAGCAGTTGGAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVQGQEF*SSWKGQ
Trigger: CTGCCCTTTCCAACTGCTCCAGAACTCTTGGCCCTG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394168.1
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAAGGTTGGTCCTCAGTaGGATCAGGAAGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSKVGPQ*DQEEEK
Trigger: CTTCTCCTCTTCCTGATCTCACTGAGGACCAACCTT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTTAGGAGTCTGTCTATaGACCAGGAGCCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLGVCL*TRSPPL
Trigger: GAGTGGAGGGCTCCTGGTTCATAGACAGACTCCTAA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTGGCCCATGGGGGAATaGATAACAATACTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVWPMGE*ITILPP
Trigger: TGGGGGCAGTATTGTTATTCATTCCCCCATGGGCCA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACCACTTGGCCAGAAATaGGCTGAGAGGGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSPLGQK*AERVEF
Trigger: AAACTCAACCCTCTCAGCTCATTTCTGGCCAAGTGG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCCACTTGGCCAGAAATaGGCTGAGAGGGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVPLGQK*AERVEF
Trigger: AAACTCAACCCTCTCAGCTCATTTCTGGCCAAGTGG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCCACTTGGCCAGAAATaGGCTGAGAGGGTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGPLGQK*AERVEF
Trigger: AAACTCAACCCTCTCAGCTCATTTCTGGCCAAGTGG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCAACATGACATGCTCTaGGGCCACTTGGCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVQHDML*GHLARN
Trigger: ATTTCTGGCCAAGTGGCCTCAGAGCATGTCATGTTG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTAGTTTCTGTTCAACATaGCATGCTCTGAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPSFCST*HALRPL
Trigger: AAGTGGCCTCAGAGCATGTCATGTTGAACAGAAACT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCCTGATGAACCAGACTaGACTGCAGACCCAAGACTA +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGPDEPD*TADPRL
Trigger: TAGTCTTGGGTCTGCAGTTCAGTCTGGTTCATCAGG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCCTGATGAACCAGACTaGACTGCAGACCCAAGACTA +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVPDEPD*TADPRL
Trigger: TAGTCTTGGGTCTGCAGTTCAGTCTGGTTCATCAGG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTTTGGCTGGGTCAGCTaGTCTCCTGTAAAGTTTGAT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPFGWVS*SPVKFD
Trigger: ATCAAACTTTACAGGAGATCAGCTGACCCAGCCAAA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCACTGTGGTCCGGGATaGACTTTTCCAGGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVHCGPG*TFPGSF
Trigger: AAAACTGCCTGGAAAAGTTCATCCCGGACCACAGTG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCACTTTCATAACACTTaGAATGAGTGGGGCCTATCA +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVHFHNT*NEWGLS
Trigger: TGATAGGCCCCACTCATTTCAAGTGTTATGAAAGTG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGGCAACACATTAAAGTaGAGACCAGTGGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSGNTLK*RPVAAP
Trigger: AGGTGCAGCCACTGGTCTTCACTTTAATGTGTTGCC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGGGAAGAAAGAGAGGTaGCAAATGTACATGAAGCTT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVGKKER*QMYMKL
Trigger: AAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATCGACATGCGAGTTATaGCCCATGTGCGTAGAACCT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSSTCEL*PMCVEP
Trigger: AGGTTCTACGCACATGGGTCATAACTCGCATGTCGA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATGAACCTGAACAACTaGATGTTGGCCATCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVMNLNN*MLAIRG
Trigger: GCCTCGGATGGCCAACATTCAGTTGTTCAGGTTCAT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGATGAACCTGAACAACTaGATGTTGGCCATCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGMNLNN*MLAIRG
Trigger: GCCTCGGATGGCCAACATTCAGTTGTTCAGGTTCAT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCTGATCCCCACATGTTaGATAAAGCCATGTTGTACA +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVLIPTC*IKPCCT
Trigger: TGTACAACATGGCTTTATGCAACATGTGGGGATCAG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATTTGATGGGGCTTGCTaGCCGCTGCCCTTTAATATG +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSFDGAC*PLPFNM
Trigger: CATATTAAAGGGCAGCGGGCAGCAAGCCCCATCAAA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACATTTGATGGGGCTTaGTGCCCGCTGCCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVTFDGA*CPLPFN
Trigger: ATTAAAGGGCAGCGGGCAGCAAGCCCCATCAAATGT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGAGGCAGCAAATGTCTaGCCAGACACTAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSEAANV*PDTKWT
Trigger: TGTCCACTTAGTGTCTGGGCAGACATTTGCTGCCTC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGAGCCCAGGGATCTGTaGTTGCCTCAGGCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGEPRDL*LPQAVC
Trigger: ACAGACGGCCTGAGGCAAGCACAGATCCCTGGGCTC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGCCCTGGCAGTGTGGTaGTCAAGAGCCCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIALAVW*SRAQGS
Trigger: AGATCCCTGGGCTCTTGAGCACCACACTGCCAGGGC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGCCCTGGCAGTGTGGTaGTCAAGAGCCCAGGGATCT +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGALAVW*SRAQGS
Trigger: AGATCCCTGGGCTCTTGAGCACCACACTGCCAGGGC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATGGTCCCTCTGCAACTaGTGGAGAATGAAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSWSLCN*WRMKAP
Trigger: AGGAGCTTTCATTCTCCAGCAGTTGCAGAGGGACCA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATGGGCTTGGTCCCTCTaGAACTGCTGGAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSWAWSL*NCWRMK
Trigger: TTTCATTCTCCAGCAGTTGCAGAGGGACCAAGCCCA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATTGCAGAGAGCTGCTTaGTTTACTGCCATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSLQRAA*FTAMLV
Trigger: GACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGGGTCACTCTGGGGCTaGCGTCCCGCCTTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIGSLWG*RPAFLS
Trigger: ACTCAAAAAGGCGGGACGGCAGCCCCAGAGTGACCC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACAGCCAGCAATTTACTaGTCAAAGATGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSQPAIY*SKMAEG
Trigger: CCCCTCAGCCATCTTTGAGCAGTAAATTGCTGGCTG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAATGCCCTGCGTATGTaGTACTGGCTTTTCCACCAG +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVNALRM*YWLFHQ
Trigger: CTGGTGGAAAAGCCAGTAGCACATACGCAGGGCATT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCTCCTCTGTACACTGTaGCTCTTAACTGGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPLLCTL*LLTGFH
Trigger: ATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTGTTGTGGGAGAGGGTaGAAAGAGAGGTTAAATGAA +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVCCGRG*KERLNE
Trigger: TTCATTTAACCTCTCTTTGCACCCTCTCCCACAACA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGTTTTGGTAATGAATTaGTGCCAGGGGTCACTACTG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPVLVMN*CQGSLL
Trigger: CAGTAGTGACCCCTGGCAGCAATTCATTACCAAAAC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGGCCCTTCTCCAAGCTaGTTGCTTACACCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVGPSPS*LLTPLR
Trigger: CCTCAAAGGTGTAAGCAACCAGCTTGGAGAAGGGCC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAACAGGCTGTGCTACTaGACTGGAACTAGAGTTCCC +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSNRLCY*TGTRVP
Trigger: GGGAACTCTAGTTCCAGTCCAGTAGCACAGCCTGTT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTATGATTGGCTATCACTaGACTTCCAGAGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPMIGYH*TSRGSK
Trigger: TTTGCTGCCTCTGGAAGTCCAGTGATAGCCAATCAT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGAGGAGAGGCATGATTaGCTATCACTGGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGEERHD*LSLDFQ
Trigger: CTGGAAGTCCAGTGATAGCCAATCATGCCTCTCCTC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTTGTCACCGATGGCATaGTGGCGAAGCCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGLSPMA*WRSQVF
Trigger: GAAGACCTGGCTTCGCCACCATGCCATCGGTGACAA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTCCAGAATCCTGCCCTaGCAGTGTGGTGCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGSRILP*QCGAQE
Trigger: CTCTTGAGCACCACACTGCCAGGGCAGGATTCTGGA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGAAGCTCTTTCCTCCTaGTTGAACATCCTATCGATC +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPEALSS*LNILSI
Trigger: GATCGATAGGATGTTCAACCAGGAGGAAAGAGCTTC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTACCATGATCCGATCTaGATGAGGTTTTCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVYHDPI*MRFSGA
Trigger: GGCACCGGAAAACCTCATCCAGATCGGATCATGGTA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTACCATGATCCGATCTaGATGAGGTTTTCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGYHDPI*MRFSGA
Trigger: GGCACCGGAAAACCTCATCCAGATCGGATCATGGTA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCTCAGACTTTTGTCCTaGAAGGAATTGTTACACGTC +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVLRLLS*KELLHV
Trigger: GACGTGTAACAATTCCTTCCAGGACAAAAGTCTGAG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCAAGCTCTTTGTCAGCTaGAGATCTGGCTGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVKLFVS*RSGWGS
Trigger: CGAACCCCAGCCAGATCTCCAGCTGACAAAGAGCTT...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTTTACTGCTCAAAGATaGCTGAGGGGGAAGAACCAT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPFTAQR*LRGKNH
Trigger: ATGGTTCTTCCCCCTCAGCCATCTTTGAGCAGTAAA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTAACAAAAATGACCTCTaGATCCGAGCAGCTCAGATA +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVNKNDL*IRAAQI
Trigger: TATCTGAGCTGCTCGGATCCAGAGGTCATTTTTGTT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGCCAGAAGCAGATTCTaGCAACACATTAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVARSRF*QHIKVK
Trigger: CTTCACTTTAATGTGTTGCCAGAATCTGCTTCTGGC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTGCTATTATGAAGACTaGCCATCTCACAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVCYYED*PSHRVF
Trigger: GAAAACCCTGTGAGATGGCCAGTCTTCATAATAGCA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCCAATGTCTGTTCAGTaGTATTGGCCTCTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVPMSVQ*YWPLAR
Trigger: CCTTGCAAGAGGCCAATATCACTGAACAGACATTGG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCGCTGCCCTTTAATATaGTTTGAGATCCATCTAGGT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPRCPLI*FEIHLG
Trigger: ACCTAGATGGATCTCAAATCATATTAAAGGGCAGCG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGAAACTGGAAGACGATaGGACACACTGACTGGTACT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSETGRR*DTLTGT
Trigger: AGTACCAGTCAGTGTGTCTCATCGTCTTCCAGTTTC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTGGATGGCCAGGAGATaGTCCAACTACTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGWMARR*SNYFFL
Trigger: CAGGAAAAAGTAGTTGGATCATCTCCTGGCCATCCA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTTTTGTCCTCCCGAATaGCTCTCCACCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGFCPPE*LSTCTA
Trigger: AGCTGTGCAGGTGGAGAGTCATTCGGGAGGACAAAA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTTGCTCTCAGTACCATaGTCCGATCTGGATGAGGTT +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGLLSVP*SDLDEV
Trigger: AACCTCATCCAGATCGGATCATGGTACTGAGAGCAA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGGTACGTTGCTATTATaGAGACTGGCCATCTCACAG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGGTLLL*RLAISQ
Trigger: CTGTGAGATGGCCAGTCTTCATAATAGCAACGTACC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGGCATGTGGCTGGGGTaGAGGTACGTTGCTATTATG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGGMWLG*RYVAIM
Trigger: CATAATAGCAACGTACCTTCACCCCAGCCACATGCC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGCTCCAACAGGCACATaGGTCACCCCTATAGGCTGC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGAPTGT*VTPIGC
Trigger: GCAGCCTATAGGGGTGACGCATGTGCCTGTTGGAGC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAACCCACTGTATTGCTTaGAAACGATGCTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSTHCIA*KRCSNR
Trigger: CCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCAATACTGCCCCCAGTaGTGCTCACTGCCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIQYCPQ*CSLPVR
Trigger: CCTCACAGGCAGTGAGCAGCACTGGGGGCAGTATTG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGAGGCAGCAAATGTCTaGCCAGACACTAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVEAANV*PDTKWT
Trigger: TGTCCACTTAGTGTCTGGGCAGACATTTGCTGCCTC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACCAACTACTTTTTCCTaGTGTGGTTGTGCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSPTTFS*CGCAVP
Trigger: AGGAACCGCACAACCACAGCAGGAAAAAGTAGTTGG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTGGTCCCTCTGCAACTaGTGGAGAATGAAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVWSLCN*WRMKAP
Trigger: AGGAGCTTTCATTCTCCAGCAGTTGCAGAGGGACCA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCCTTGCTTTACTGCCATaGTGGTCACTCCGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGLALLP*WSLRPN
Trigger: GTTTGGCCGGAGTGACCAGCATGGCAGTAAAGCAAG...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTTGCAGAGAGCTGCTTaGTTTACTGCCATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLQRAA*FTAMLV
Trigger: GACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGCGGTTGCAGAGAGCTaGTTGCTTTACTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGAVAES*LLYCHA
Trigger: AGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGACGTGCTCTGGTACTaGACTAAGCCCACTTTGTCA +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVDVLWY*TKPTLS
Trigger: TGACAAAGTGGGCTTAGTGCAGTACCAGAGCACGTC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCGCGAATCTGCTAGGATaGTTGACAGTTTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVANLLG*LTVCSQ
Trigger: CTGAGAGCAAACTGTCAAGCATCCTAGCAGATTCGC...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGGGGTGAAGGTACGTTaGTATTATGAAGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGGVKVR*YYEDWP
Trigger: TGGCCAGTCTTCATAATAGCAACGTACCTTCACCCC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATTTACATCACGGAATaGCAGGGCCAAGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVIYITE*QGQEFW
Trigger: CCAGAACTCTTGGCCCTGGCATTCCGTGATGTAAAT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394168.1
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGTGGCAGTCCATCACTaGGCCCTTCTCCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGVAVHH*ALLQAG
Trigger: ACCAGCTTGGAGAAGGGCCCAGTGATGGACTGCCAC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGTGGCAGTCCATCACTaGGCCCTTCTCCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIVAVHH*ALLQAG
Trigger: ACCAGCTTGGAGAAGGGCCCAGTGATGGACTGCCAC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACTATTAGACAAATGCTaGCTGGGAACACTGATCCCC +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSLLDKC*LGTLIP
Trigger: GGGGATCAGTGTTCCCAGCCAGCATTTGTCTAATAG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCTATTAGACAAATGCTaGCTGGGAACACTGATCCCC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLLDKC*LGTLIP
Trigger: GGGGATCAGTGTTCCCAGCCAGCATTTGTCTAATAG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCGGTCCAGTATATGGTTaGTTGGTCCTGAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVGPVYG*LVLSML
Trigger: CAACATGCTCAGGACCAACCAACCATATACTGGACC...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTGCCCAGACACTAAGTaGACAGCAGTATTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGCPDTK*TAVFWL
Trigger: CAACCAGAATACTGCTGTCCACTTAGTGTCTGGGCA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTGCCCAGACACTAAGTaGACAGCAGTATTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVCPDTK*TAVFWL
Trigger: CAACCAGAATACTGCTGTCCACTTAGTGTCTGGGCA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGACCCAAGACTAGGATaGGCAGTGCTGGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGDPRLG*AVLAEL
Trigger: CAGCTCAGCCAGCACTGCCCATCCTAGTCTTGGGTC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCCACACTGACTGGTACTaGAGTCCTGTTTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGHTDWY*SPVWLG
Trigger: ACCCAGCCAAACAGGACTCCAGTACCAGTCAGTGTG...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCAGAAGAATTGTTGCTaGGTTCCTGTTCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVQKNCC*VPVPGV
Trigger: CACACCTGGAACAGGAACCCAGCAACAATTCTTCTG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTCTTGGGAGCAGAAATaGGGGAAGTCTGATTCAGAC +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGSWEQK*GKSDSD
Trigger: GTCTGAATCAGACTTCCCCCATTTCTGCTCCCAAGA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGCCTCAGGCCGTCTGTaGTCTTGGGAGCAGAAATGG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIASGRL*SWEQKW
Trigger: CCATTTCTGCTCCCAAGACCACAGACGGCCTGAGGC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCACCTGCACAGCTGGATaGCCAGGAGATGATCCAACT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGTCTAG*PGDDPT
Trigger: AGTTGGATCATCTCCTGGCCATCCAGCTGTGCAGGT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTCCCTCTGCAACTGCTaGAGAATGAAAGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVSLCNC*RMKAPF
Trigger: GAAAGGAGCTTTCATTCTCCAGCAGTTGCAGAGGGA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACTTCTTCAGTGGGCATaGAGCCCTGGCACACGTGGT +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGLLQWA*SPGTRG
Trigger: ACCACGTGTGCCAGGGCTCCATGCCCACTGAAGAAG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGACTGGTCATGATTCATaGGTTCCGTCACACCGGTTT +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGTGHDS*VPSHRF
Trigger: AAACCGGTGTGACGGAACCCATGAATCATGACCAGT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACTGGTCATGATTCATaGGTTCCGTCACACCGGTTT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVTGHDS*VPSHRF
Trigger: AAACCGGTGTGACGGAACCCATGAATCATGACCAGT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGACAACACCTTCACTGTaGTCCGGGATGAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGTTPSL*SGMNFS
Trigger: GGAAAAGTTCATCCCGGACCACAGTGAAGGTGTTGT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAAGGAACGAATGTAACTaGTCCGGGGTGGGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGRNECN*SGVGSR
Trigger: CCGAGACCCCACCCCGGACCAGTTACATTCGTTCCT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAAGATCAAGCAGGCTaGAGACAGGAGACCATTTCC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVKDQAG*RQETIS
Trigger: GGAAATGGTCTCCTGTCTCCAGCCTGCTTGATCTTT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTAGTGCTTTTGATGCTTaGTATTTGTTGTGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPSAFDA*YLLWER
Trigger: CCTCTCCCACAACAAATACCAAGCATCAAAAGCACT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCTTTCCTTTCAGTGGTaGGCTAGCTGGTTACCTTTG +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLSFQW*ASWLPL
Trigger: CAAAGGTAACCAGCTAGCCCACCACTGAAAGGAAAG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCGATCTTTCCTTTCAGTaGTGGGCTAGCTGGTTACCT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVDLSFQ*WASWLP
Trigger: AGGTAACCAGCTAGCCCACCACTGAAAGGAAAGATC...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGATCTTTCCTTTCAGTaGTGGGCTAGCTGGTTACCT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSDLSFQ*WASWLP
Trigger: AGGTAACCAGCTAGCCCACCACTGAAAGGAAAGATC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTAACAAAAATGACCTCTaGATCCGAGCAGCTCAGATA +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPNKNDL*IRAAQI
Trigger: TATCTGAGCTGCTCGGATCCAGAGGTCATTTTTGTT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCATCATCATCATCCATaGCAACATTGCAATGTGAGA +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPHHHHP*QHCNVR
Trigger: TCTCACATTGCAATGTTGTCATGGATGATGATGATG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATGCAAACTGTTGGCTTaGACCTATACTGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSCKLLA*TYTGIQ
Trigger: TTGGATGCCAGTATAGGTTCAAGCCAACAGTTTGCA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTGCAAACTGTTGGCTTaGACCTATACTGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVCKLLA*TYTGIQ
Trigger: TTGGATGCCAGTATAGGTTCAAGCCAACAGTTTGCA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGTCATCATGGAAGGATaGTTACCAAATGACCCAATT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPVIMEG*LPNDPI
Trigger: AATTGGGTCATTTGGTAATCATCCTTCCATGATGAC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGCTGCTCACTGCCTGTaGGGTGACTGGCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGAAHCL*GDWLSC
Trigger: ACAAGAAAGCCAGTCACCTCACAGGCAGTGAGCAGC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAGTTTCTGTTCAACATaGCATGCTCTGAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSSFCST*HALRPL
Trigger: AAGTGGCCTCAGAGCATGTCATGTTGAACAGAAACT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCATGGTTGGTTGGTCCTaGGCATGTTGGAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVMVGWS*ACWKSF
Trigger: GAAACTCTTCCAACATGCTCAGGACCAACCAACCAT...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGAACCGACTAGGTCCTaGCATGCTTGTCACCGATGG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGEPTRS*HACHRW
Trigger: CCATCGGTGACAAGCATGTCAGGACCTAGTCGGTTC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCTCTTTCCTCCTGGTTaGACATCCTATCGATCATCA +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLFPPG*TSYRSS
Trigger: TGATGATCGATAGGATGTTCAACCAGGAGGAAAGAG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCTCTTTCCTCCTGGTTaGACATCCTATCGATCATCA +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGLFPPG*TSYRSS
Trigger: TGATGATCGATAGGATGTTCAACCAGGAGGAAAGAG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCAGCTTTATCAAGTTTaGAGGAACAACAGAAATCAG +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVQLYQV*RNNRNQ
Trigger: CTGATTTCTGTTGTTCCTTCAAACTTGATAAAGCTG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTGGCTGGGGTTCGCCTaGCCCTTTCATGATGTCTGT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIWLGFA*PFHDVC
Trigger: ACAGACATCATGAAAGGGTCAGGCGAACCCCAGCCA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACAGGCAGTTTTCCTGTaGAGCCATAGGAGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSQAVFL*SHRRKV
Trigger: AACTTTTCTCCTATGGCTTCACAGGAAAACTGCCTG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAATATGCCTAAAAGCATaGGGTTTTGCTCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSICLKA*GFAPEA
Trigger: TGCTTCCGGAGCAAAACCTCATGCTTTTAGGCATAT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGCCAAACAGAAACCATaGCAGGGCATATCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGAKQKP*QGISFG
Trigger: GCCAAAGGATATGCCCTGTCATGGTTTCTGTTTGGC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCATTGCTTGCAAACGATaGTCCAACAGGCACATGCGT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVIACKR*SNRHMR
Trigger: ACGCATGTGCCTGTTGGAGCATCGTTTGCAAGCAAT...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCTGCTATTAGACAAATaGTGGCTGGGAACACTGATC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLLLDK*WLGTLI
Trigger: GATCAGTGTTCCCAGCCAGCATTTGTCTAATAGCAG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTTTGATGGGGCTTGCTaGCCGCTGCCCTTTAATATG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGFDGAC*PLPFNM
Trigger: CATATTAAAGGGCAGCGGGCAGCAAGCCCCATCAAA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCACATTTGATGGGGCTTaGTGCCCGCTGCCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGTFDGA*CPLPFN
Trigger: ATTAAAGGGCAGCGGGCAGCAAGCCCCATCAAATGT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAACAGTTGGGGATGCCTaGTGCAAGGGCATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGTVGDA*CKGICP
Trigger: TGGACAGATGCCCTTGCAGCAGGCATCCCCAACTGT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTACAGTTGGGGATGCCTaGTGCAAGGGCATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFITVGDA*CKGICP
Trigger: TGGACAGATGCCCTTGCAGCAGGCATCCCCAACTGT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTTCCTTGGGAAACGCTaGTCTGCCCAGGTGACAGGT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIFLGKR*SAQVTG
Trigger: ACCTGTCACCTGGGCAGAGCAGCGTTTCCCAAGGAA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTTGCTTCCAGAATCCTaGCCTGGCAGTGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFILLPES*PGSVVL
Trigger: GAGCACCACACTGCCAGGGCAGGATTCTGGAAGCAA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTGGGCTTGGTCCCTCTaGAACTGCTGGAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGWAWSL*NCWRMK
Trigger: TTTCATTCTCCAGCAGTTGCAGAGGGACCAAGCCCA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGCCTTGGCTGGCGGTTaGAGAGAGCTGCTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIALAGG*RELLAL
Trigger: TAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGGATGCTTGACAGTTTaGTCTCAGTACCATGATCCG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVGCLTV*SQYHDP
Trigger: CGGATCATGGTACTGAGAGCAAACTGTCAAGCATCC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGCGAATCTGCTAGGATaGTTGACAGTTTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVANLLG*LTVCSQ
Trigger: CTGAGAGCAAACTGTCAAGCATCCTAGCAGATTCGC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGGCAAACCGCTCGCCTaGTCGTCTACCTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIGKPLA*SSTSKL
Trigger: AAGTTTGGAGGTAGACGAGCAGGCGAGCGGTTTGCC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGAGAATGTCGAAAGGTTaGTCCTCAGTGAGATCAGGA +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGRMSKG*SSVRSG
Trigger: TCCTGATCTCACTGAGGACCAACCTTTCGACATTCT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGCTTGTGCAAACTGTTaGCTTGAACCTATACTGGCA +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSACANC*LEPILA
Trigger: TGCCAGTATAGGTTCAAGCCAACAGTTTGCACAAGC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAACAGGCTGTGCTACTaGACTGGAACTAGAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGNRLCY*TGTRVP
Trigger: GGGAACTCTAGTTCCAGTCCAGTAGCACAGCCTGTT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCATCGGTCCAGTATATaGTTGGTTGGTCCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVHRSSI*LVGPEH
Trigger: ATGCTCAGGACCAACCAACCATATACTGGACCGATG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATGGACAGCAGTATTCTaGTTGTTAAGCATCGGTCCA +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSWTAVF*LLSIGP
Trigger: TGGACCGATGCTTAACAACCAGAATACTGCTGTCCA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGAGGAGAGGCATGATTaGCTATCACTGGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGEERHD*LSLDFQ
Trigger: CTGGAAGTCCAGTGATAGCCAATCATGCCTCTCCTC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAAGCCAGGTCTTCCTTaGGAAACGCTGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIKPGLP*ETLLCP
Trigger: TGGGCAGAGCAGCGTTTCCCAAGGAAGACCTGGCTT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAAAGCCAGGTCTTCCTTaGGAAACGCTGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGKPGLP*ETLLCP
Trigger: TGGGCAGAGCAGCGTTTCCCAAGGAAGACCTGGCTT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCAGAAGAATTGTTGCTaGGTTCCTGTTCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVQKNCC*VPVPGV
Trigger: CACACCTGGAACAGGAACCCAGCAACAATTCTTCTG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTCTTGGGAGCAGAAATaGGGGAAGTCTGATTCAGAC +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVSWEQK*GKSDSD
Trigger: GTCTGAATCAGACTTCCCCCATTTCTGCTCCCAAGA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTTTACTGCTCAAAGATaGCTGAGGGGGAAGAACCAT +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGFTAQR*LRGKNH
Trigger: ATGGTTCTTCCCCCTCAGCCATCTTTGAGCAGTAAA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACTGCGTATGTGCTACTaGCTTTTCCACCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGLRMCY*LFHQGC
Trigger: GCAGCCCTGGTGGAAAAGCCAGTAGCACATACGCAG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACCTTTGGCTCTCAAATaGGAATCCCATGTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSPLALK*ESHVSD
Trigger: ATCTGAGACATGGGATTCCCATTTGAGAGCCAAAGG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCCTTTGGCTCTCAAATaGGAATCCCATGTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGPLALK*ESHVSD
Trigger: ATCTGAGACATGGGATTCCCATTTGAGAGCCAAAGG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGGGTCATCCCCATGTTaGCGACAGCCAGAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGGSSPC*RQPEAD
Trigger: ATCTGCTTCTGGCTGTCGCCAACATGGGGATGACCC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTTTTCCAATTTGTATTaGCTGGGGCATGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVFSNLY*LGHVAG
Trigger: CCCAGCCACATGCCCCAGCCAATACAAATTGGAAAA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTCTTGCAAGGATTTCTaGAGAATGTCGAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGSCKDF*RMSKGW
Trigger: CCAACCTTTCGACATTCTTCAGAAATCCTTGCAAGA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCTGCAGCGTCTGACCTaGGTAATTAGAAACATTAGA +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGLQRLT*VIRNIR
Trigger: TCTAATGTTTCTAATTACTCAGGTCAGACGCTGCAG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACTGCAGCGTCTGACCTaGGTAATTAGAAACATTAGA +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSLQRLT*VIRNIR
Trigger: TCTAATGTTTCTAATTACTCAGGTCAGACGCTGCAG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACCAGAACCACTAATCTaGCTGCTATTAGACAAATGC +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSPEPLI*LLLDKC
Trigger: GCATTTGTCTAATAGCAGTCAGATTAGTGGTTCTGG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACGCTGCCCTTTAATATaGTTTGAGATCCATCTAGGT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSRCPLI*FEIHLG
Trigger: ACCTAGATGGATCTCAAATCATATTAAAGGGCAGCG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATTAGGAGTCTGTCTATaGACCAGGAGCCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGLGVCL*TRSPPL
Trigger: GAGTGGAGGGCTCCTGGTTCATAGACAGACTCCTAA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCAGTTTCTGTTCAACATaGCATGCTCTGAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVSFCST*HALRPL
Trigger: AAGTGGCCTCAGAGCATGTCATGTTGAACAGAAACT...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGAAACTGGAAGACGATaGGACACACTGACTGGTACT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGETGRR*DTLTGT
Trigger: AGTACCAGTCAGTGTGTCTCATCGTCTTCCAGTTTC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTGGATGGCCAGGAGATaGTCCAACTACTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGWMARR*SNYFFL
Trigger: CAGGAAAAAGTAGTTGGATCATCTCCTGGCCATCCA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTTTTGTCCTCCCGAATaGCTCTCCACCTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIFCPPE*LSTCTA
Trigger: AGCTGTGCAGGTGGAGAGTCATTCGGGAGGACAAAA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCAGCTTTATCAAGTTTaGAGGAACAACAGAAATCAG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPQLYQV*RNNRNQ
Trigger: CTGATTTCTGTTGTTCCTTCAAACTTGATAAAGCTG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCCAAACTGTGTCTCATaGGCAGCTTTATCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVPNCVS*AALSSL
Trigger: CAAACTTGATAAAGCTGCTCATGAGACACAGTTTGG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCAGGCAGTTTTCCTGTaGAGCCATAGGAGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVQAVFL*SHRRKV
Trigger: AACTTTTCTCCTATGGCTTCACAGGAAAACTGCCTG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACCATGCTCACTAATATaGACACAGGCCAAACAGAAA +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSPCSLI*TQAKQK
Trigger: TTTCTGTTTGGCCTGTGTTCATATTAGTGAGCATGG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCCATGCTCACTAATATaGACACAGGCCAAACAGAAA +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGPCSLI*TQAKQK
Trigger: TTTCTGTTTGGCCTGTGTTCATATTAGTGAGCATGG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGGCATGTGGCTGGGGTaGAGGTACGTTGCTATTATG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGGMWLG*RYVAIM
Trigger: CATAATAGCAACGTACCTTCACCCCAGCCACATGCC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCATCATCATCATCCATaGCAAACTAGTGATCCGACA +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGHHHHP*QTSDPT
Trigger: TGTCGGATCACTAGTTTGTCATGGATGATGATGATG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394168.1
CDS-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAACGGTAACAGGCTGTaGTACTGGACTGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGNGNRL*YWTGTR
Trigger: TCTAGTTCCAGTCCAGTAGCACAGCCTGTTACCGTT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTGGGGCCTATCAGACTaGTTTCTGCCAAGGATTAAT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVWGLSD*FLPRIN
Trigger: ATTAATCCTTGGCAGAAAGCAGTCTGATAGGCCCCA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGAAAAAGGGGAAATCTaGAACTTGGACATTGGCACA +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSEKGEI*NLDIGT
Trigger: TGTGCCAATGTCCAAGTTGCAGATTTCCCCTTTTTC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTATAGTTCAATGCTTGTaGGTCTCCAATAAGATCAAG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPIVQCL*VSNKIK
Trigger: CTTGATCTTATTGGAGACCCACAAGCATTGAACTAT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGGCCCTTCTCCAAGCTaGTTGCTTACACCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGGPSPS*LLTPLR
Trigger: CCTCAAAGGTGTAAGCAACCAGCTTGGAGAAGGGCC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCACACTGACTGGTACTaGAGTCCTGTTTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIHTDWY*SPVWLG
Trigger: ACCCAGCCAAACAGGACTCCAGTACCAGTCAGTGTG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAACCTGCACAGCTGGATaGCCAGGAGATGATCCAACT +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGTCTAG*PGDDPT
Trigger: AGTTGGATCATCTCCTGGCCATCCAGCTGTGCAGGT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTTTTTAGGAGCTGAGTaGCAACTGTCTCAAATTCAT +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPFLGAE*QLSQIH
Trigger: ATGAATTTGAGACAGTTGCCACTCAGCTCCTAAAAA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCACTGGTCATGATTCATaGGTTCCGTCACACCGGTTT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGTGHDS*VPSHRF
Trigger: AAACCGGTGTGACGGAACCCATGAATCATGACCAGT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCCTTTGGCTCTCAAATaGGAATCCCATGTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVPLALK*ESHVSD
Trigger: ATCTGAGACATGGGATTCCCATTTGAGAGCCAAAGG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGCCAGAAGCAGATTCTaGCAACACATTAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGARSRF*QHIKVK
Trigger: CTTCACTTTAATGTGTTGCCAGAATCTGCTTCTGGC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACATCACAGGCCAATCTaGAAAAGAAATGCCCAACAT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSHHRPI*KRNAQH
Trigger: ATGTTGGGCATTTCTTTTCCAGATTGGCCTGTGATG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTATGGTAACCCTAAAATaGGCCAGATTTTCCAATTTG +
Preference number: 4 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPMVTLK*ARFSNL
Trigger: CAAATTGGAAAATCTGGCCCATTTTAGGGTTACCAT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGAAGCCTATGAAATCATaGAGTTTAGGGCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGKPMKS*SLGQGV
Trigger: AACACCCTGCCCTAAACTCCATGATTTCATAGGCTT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAGCCTATGAAATCATaGAGTTTAGGGCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVKPMKS*SLGQGV
Trigger: AACACCCTGCCCTAAACTCCATGATTTCATAGGCTT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTATTTTCCCAAATCTTTaGCTGTATTGCAATGGTTGT +
Preference number: 4 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVIFPNL*LYCNGC
Trigger: ACAACCATTGCAATACAGCCAAAGATTTGGGAAAAT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000394168.1
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATCGCTGGGCTTTTTGTaGAATAATATGACGTTTTGC +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSSLGFL*NNMTFC
Trigger: GCAAAACGTCATATTATTTCACAAAAAGCCCAGCGA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTCGCTGGGCTTTTTGTaGAATAATATGACGTTTTGC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVSLGFL*NNMTFC
Trigger: GCAAAACGTCATATTATTTCACAAAAAGCCCAGCGA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCATCATCATCATCCATaGCAACATTGCAATGTGAGA +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVHHHHP*QHCNVR
Trigger: TCTCACATTGCAATGTTGTCATGGATGATGATGATG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR TCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAAAGGTTGGTCCTCAGTaGGATCAGGAAGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGKVGPQ*DQEEEK
Trigger: CTTCTCCTCTTCCTGATCTCACTGAGGACCAACCTT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGTCATCATGGAAGGATaGTTACCAAATGACCCAATT +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGVIMEG*LPNDPI
Trigger: AATTGGGTCATTTGGTAATCATCCTTCCATGATGAC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAATTGGGACTTTATTTaGATTTGGTGCAAGACCCCT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSNWDFI*IWCKTP
Trigger: AGGGGTCTTGCACCAAATTCAAATAAAGTCCCAATT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGAATTGGGACTTTATTTaGATTTGGTGCAAGACCCCT +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGNWDFI*IWCKTP
Trigger: AGGGGTCTTGCACCAAATTCAAATAAAGTCCCAATT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTTGTATGTATTTTGCTaGCCCATCTGGATAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLYVFC*PIWIGF
Trigger: AAAGCCTATCCAGATGGGTCAGCAAAATACATACAA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTTTGGCTGGGTCAGCTaGTCTCCTGTAAAGTTTGAT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGFGWVS*SPVKFD
Trigger: ATCAAACTTTACAGGAGATCAGCTGACCCAGCCAAA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCACTTTCATAACACTTaGAATGAGTGGGGCCTATCA +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVHFHNT*NEWGLS
Trigger: TGATAGGCCCCACTCATTTCAAGTGTTATGAAAGTG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCATATGCCTAAAAGCATaGGGTTTTGCTCCGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGICLKA*GFAPEA
Trigger: TGCTTCCGGAGCAAAACCTCATGCTTTTAGGCATAT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGCCAAACAGAAACCATaGCAGGGCATATCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGAKQKP*QGISFG
Trigger: GCCAAAGGATATGCCCTGTCATGGTTTCTGTTTGGC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCGGTGACAAATGTACATaGAGCTTATCTTGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVGDKCT*SLSCLL
Trigger: CAAGAGACAAGATAAGCTTCATGTACATTTGTCACC...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGGCTGCAGAATATCCTaGATTAGTCAAGTCATCATT +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSGCRIS*ISQVII
Trigger: AATGATGACTTGACTAATGCAGGATATTCTGCAGCC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCTGATCCCCACATGTTaGATAAAGCCATGTTGTACA +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLIPTC*IKPCCT
Trigger: TGTACAACATGGCTTTATGCAACATGTGGGGATCAG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTTTGATGGGGCTTGCTaGCCGCTGCCCTTTAATATG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIFDGAC*PLPFNM
Trigger: CATATTAAAGGGCAGCGGGCAGCAAGCCCCATCAAA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGAGGCAGCAAATGTCTaGCCAGACACTAAGTGGACA +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGEAANV*PDTKWT
Trigger: TGTCCACTTAGTGTCTGGGCAGACATTTGCTGCCTC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTGGGCTTGGTCCCTCTaGAACTGCTGGAGAATGAAA +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIWAWSL*NCWRMK
Trigger: TTTCATTCTCCAGCAGTTGCAGAGGGACCAAGCCCA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGACGTGCTCTGGTACTaGACTAAGCCCACTTTGTCA +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIDVLWY*TKPTLS
Trigger: TGACAAAGTGGGCTTAGTGCAGTACCAGAGCACGTC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGACGTGCTCTGGTACTaGACTAAGCCCACTTTGTCA +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGDVLWY*TKPTLS
Trigger: TGACAAAGTGGGCTTAGTGCAGTACCAGAGCACGTC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACCTTCTCTTCAGACGTaGTCTGGTACTGCACTAAGC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGPSLQT*SGTALS
Trigger: GCTTAGTGCAGTACCAGAGCACGTCTGAAGAGAAGG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTGGGGCCTATCAGACTaGTTTCTGCCAAGGATTAAT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGWGLSD*FLPRIN
Trigger: ATTAATCCTTGGCAGAAAGCAGTCTGATAGGCCCCA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCAGCCAGCAATTTACTaGTCAAAGATGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIQPAIY*SKMAEG
Trigger: CCCCTCAGCCATCTTTGAGCAGTAAATTGCTGGCTG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCCTCCTCTGTACACTGTaGCTCTTAACTGGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGLLCTL*LLTGFH
Trigger: ATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAG...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCAAGTGCTACAATTTTTaGCAGGAGTTCCCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVKCYNF*QEFPSF
Trigger: GAAGCTTGGGAACTCCTGCCAAAAATTGTAGCACTT...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAACAGGCTGTGCTACTaGACTGGAACTAGAGTTCCC +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFINRLCY*TGTRVP
Trigger: GGGAACTCTAGTTCCAGTCCAGTAGCACAGCCTGTT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATCTTCAGACGTGCTCTaGTACTGCACTAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGSSDVL*YCTKPT
Trigger: AGTGGGCTTAGTGCAGTACCAGAGCACGTCTGAAGA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCTCAGACTTTTGTCCTaGAAGGAATTGTTACACGTC +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLRLLS*KELLHV
Trigger: GACGTGTAACAATTCCTTCCAGGACAAAAGTCTGAG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACAGCTGCTTCTAAAATaGAGTCAGTTTCTACAACAC +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSQLLLK*SQFLQH
Trigger: GTGTTGTAGAAACTGACTCCATTTTAGAAGCAGCTG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCAGCTGCTTCTAAAATaGAGTCAGTTTCTACAACAC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVQLLLK*SQFLQH
Trigger: GTGTTGTAGAAACTGACTCCATTTTAGAAGCAGCTG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTTTACTGCTCAAAGATaGCTGAGGGGGAAGAACCAT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGFTAQR*LRGKNH
Trigger: ATGGTTCTTCCCCCTCAGCCATCTTTGAGCAGTAAA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCCAAGCTTCTTCAGGTaGAATCGCTGGGCTTTTTGT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIPSFFR*NRWAFC
Trigger: ACAAAAAGCCCAGCGATTTCACCTGAAGAAGCTTGG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR TCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGACAACATTGCAATGTaGGAAGTGCTACAATTTTTG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGDNIAM*EVLQFL
Trigger: CAAAAATTGTAGCACTTCTCACATTGCAATGTTGTC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTCTTGCAAGGATTTCTaGAGAATGTCGAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGSCKDF*RMSKGW
Trigger: CCAACCTTTCGACATTCTTCAGAAATCCTTGCAAGA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGAAACATTAGAAGCCTaGGTAAAGGATGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVETLEA*VKDADE
Trigger: TTCATCAGCATCCTTTACTCAGGCTTCTAATGTTTC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCCGCTGCCCTTTAATATaGTTTGAGATCCATCTAGGT +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGRCPLI*FEIHLG
Trigger: ACCTAGATGGATCTCAAATCATATTAAAGGGCAGCG...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCAATTGGGACTTTATTTaGATTTGGTGCAAGACCCCT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVNWDFI*IWCKTP
Trigger: AGGGGTCTTGCACCAAATTCAAATAAAGTCCCAATT...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTTGTATGTATTTTGCTaGCCCATCTGGATAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLYVFC*PIWIGF
Trigger: AAAGCCTATCCAGATGGGTCAGCAAAATACATACAA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAATGGTTGGTTGGTCCTaGGCATGTTGGAAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGMVGWS*ACWKSF
Trigger: GAAACTCTTCCAACATGCTCAGGACCAACCAACCAT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTGGATGGCCAGGAGATaGTCCAACTACTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIWMARR*SNYFFL
Trigger: CAGGAAAAAGTAGTTGGATCATCTCCTGGCCATCCA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCCCAAACTGTGTCTCATaGGCAGCTTTATCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGPNCVS*AALSSL
Trigger: CAAACTTGATAAAGCTGCTCATGAGACACAGTTTGG...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCCACTTTCATAACACTTaGAATGAGTGGGGCCTATCA +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGHFHNT*NEWGLS
Trigger: TGATAGGCCCCACTCATTTCAAGTGTTATGAAAGTG...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGGTACGTTGCTATTATaGAGACTGGCCATCTCACAG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIGTLLL*RLAISQ
Trigger: CTGTGAGATGGCCAGTCTTCATAATAGCAACGTACC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTTGCAATGTGAGAAGTaGTACAATTTTTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLQCEK*YNFWQE
Trigger: CTCCTGCCAAAAATTGTAGCACTTCTCACATTGCAA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGGCTGCAGAATATCCTaGATTAGTCAAGTCATCATT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVGCRIS*ISQVII
Trigger: AATGATGACTTGACTAATGCAGGATATTCTGCAGCC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTACCCACTGTATTGCTTaGAAACGATGCTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFITHCIA*KRCSNR
Trigger: CCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAACCCACTGTATTGCTTaGAAACGATGCTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGTHCIA*KRCSNR
Trigger: CCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAACGGTAACAGGCTGTaGTACTGGACTGGAACTAGA +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFINGNRL*YWTGTR
Trigger: TCTAGTTCCAGTCCAGTAGCACAGCCTGTTACCGTT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCCAACTACTTTTTCCTaGTGTGGTTGTGCGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIPTTFS*CGCAVP
Trigger: AGGAACCGCACAACCACAGCAGGAAAAAGTAGTTGG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCAGAAATGTTTCCTTCTaGAGAGACCACGATGTGATT +
Preference number: 4 (lower is better)
Translates to: GQDREEREVTNVHEAYLVRNVSF*RDHDVI
Trigger: AATCACATCGTGGTCTCTGCAGAAGGAAACATTTCT...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGGATGCTTGACAGTTTaGTCTCAGTACCATGATCCG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGGCLTV*SQYHDP
Trigger: CGGATCATGGTACTGAGAGCAAACTGTCAAGCATCC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGCGAATCTGCTAGGATaGTTGACAGTTTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGANLLG*LTVCSQ
Trigger: CTGAGAGCAAACTGTCAAGCATCCTAGCAGATTCGC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCACGTCATCTCCAAGTaGGAATCTGCTAGGATGCTT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIHVISK*ESARML
Trigger: AAGCATCCTAGCAGATTCGCACTTGGAGATGACGTG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGATAGTTCAATGCTTGTaGGTCTCCAATAAGATCAAG +
Preference number: 4 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGIVQCL*VSNKIK
Trigger: CTTGATCTTATTGGAGACCCACAAGCATTGAACTAT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACTATTAGACAAATGCTaGCTGGGAACACTGATCCCC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGLLDKC*LGTLIP
Trigger: GGGGATCAGTGTTCCCAGCCAGCATTTGTCTAATAG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTGCCCATTTATAGTCTaGACGTGGTGTACCGAGTTG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFICPFIV*TWCTEL
Trigger: CAACTCGGTACACCACGTCCAGACTATAAATGGGCA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGGTCCAGTATATGGTTaGTTGGTCCTGAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGGPVYG*LVLSML
Trigger: CAACATGCTCAGGACCAACCAACCATATACTGGACC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCATCGGTCCAGTATATaGTTGGTTGGTCCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIHRSSI*LVGPEH
Trigger: ATGCTCAGGACCAACCAACCATATACTGGACCGATG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTCCCTCTGCAACTGCTaGAGAATGAAAGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFISLCNC*RMKAPF
Trigger: GAAAGGAGCTTTCATTCTCCAGCAGTTGCAGAGGGA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTACAACACCTTCACTGTaGTCCGGGATGAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFITTPSL*SGMNFS
Trigger: GGAAAAGTTCATCCCGGACCACAGTGAAGGTGTTGT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTGCTATTATGAAGACTaGCCATCTCACAGGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGCYYED*PSHRVF
Trigger: GAAAACCCTGTGAGATGGCCAGTCTTCATAATAGCA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTTTTCCAATTTGTATTaGCTGGGGCATGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIFSNLY*LGHVAG
Trigger: CCCAGCCACATGCCCCAGCCAATACAAATTGGAAAA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAATGGTAACCCTAAAATaGGCCAGATTTTCCAATTTG +
Preference number: 4 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSMVTLK*ARFSNL
Trigger: CAAATTGGAAAATCTGGCCCATTTTAGGGTTACCAT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTGCAAACTGTTGGCTTaGACCTATACTGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFICKLLA*TYTGIQ
Trigger: TTGGATGCCAGTATAGGTTCAAGCCAACAGTTTGCA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGAAACATTAGAAGCCTaGGTAAAGGATGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGETLEA*VKDADE
Trigger: TTCATCAGCATCCTTTACTCAGGCTTCTAATGTTTC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTTTGGCTGGGTCAGCTaGTCTCCTGTAAAGTTTGAT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIFGWVS*SPVKFD
Trigger: ATCAAACTTTACAGGAGATCAGCTGACCCAGCCAAA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCAGGCAGTTTTCCTGTaGAGCCATAGGAGAAAAGTT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIQAVFL*SHRRKV
Trigger: AACTTTTCTCCTATGGCTTCACAGGAAAACTGCCTG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCATCAGAAAAGCACTTaGACCATCAATAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIHQKST*TINREA
Trigger: GGCTTCCCTATTGATGGTTCAAGTGCTTTTCTGATG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGGTGACAAATGTACATaGAGCTTATCTTGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGGDKCT*SLSCLL
Trigger: CAAGAGACAAGATAAGCTTCATGTACATTTGTCACC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGTCATGAAAAAGCAGTaGCTTGTCAACGGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIVMKKQ*LVNGVS
Trigger: AGAAACCCCGTTGACAAGGCACTGCTTTTTCATGAC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTACTGGCATCCAAATATaGCTCTTCTGCCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFITGIQI*LFCQCL
Trigger: CAGACATTGGCAGAAGAGGCATATTTGGATGCCAGT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGTACACCCACTGTATTaGTTGCAAACGATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIVHPLY*LQTMLQ
Trigger: TTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTAC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGTACACCCACTGTATTaGTTGCAAACGATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGVHPLY*LQTMLQ
Trigger: TTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTAC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACTGCTATTAGACAAATaGTGGCTGGGAACACTGATC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGLLLDK*WLGTLI
Trigger: GATCAGTGTTCCCAGCCAGCATTTGTCTAATAGCAG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCTGCTATTAGACAAATaGTGGCTGGGAACACTGATC +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFILLLDK*WLGTLI
Trigger: GATCAGTGTTCCCAGCCAGCATTTGTCTAATAGCAG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGTTTTGGTAATGAATTaGTGCCAGGGGTCACTACTG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIVLVMN*CQGSLL
Trigger: CAGTAGTGACCCCTGGCAGCAATTCATTACCAAAAC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAGAATGTCGAAAGGTTaGTCCTCAGTGAGATCAGGA +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIRMSKG*SSVRSG
Trigger: TCCTGATCTCACTGAGGACCAACCTTTCGACATTCT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCCATCTGGATAGGCTTTaGCTGTATATTAATTGGGAC +
Preference number: 4 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGHLDRL*LYINWD
Trigger: GTCCCAATTAATATACAGCCAAAGCCTATCCAGATG...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTTTCTTGTGTTCTGTTaGTTTACAATGTTCACAGAC +
Preference number: 4 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVFLVFC*FTMFTD
Trigger: GTCTGTGAACATTGTAAACCAACAGAACACAAGAAA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGAAGCTCTTTCCTCCTaGTTGAACATCCTATCGATC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGEALSS*LNILSI
Trigger: GATCGATAGGATGTTCAACCAGGAGGAAAGAGCTTC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGAAGCTCTTTCCTCCTaGTTGAACATCCTATCGATC +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIEALSS*LNILSI
Trigger: GATCGATAGGATGTTCAACCAGGAGGAAAGAGCTTC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAGAAATGGGATAACCTaGGGCAGGTATACGAGAAAG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIRNGIT*GRYTRK
Trigger: CTTTCTCGTATACCTGCCCCAGGTTATCCCATTTCT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTCTTGCAAGGATTTCTaGAGAATGTCGAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFISCKDF*RMSKGW
Trigger: CCAACCTTTCGACATTCTTCAGAAATCCTTGCAAGA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCCAAACTGTGTCTCATaGGCAGCTTTATCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIPNCVS*AALSSL
Trigger: CAAACTTGATAAAGCTGCTCATGAGACACAGTTTGG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCCATGCTCACTAATATaGACACAGGCCAAACAGAAA +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIPCSLI*TQAKQK
Trigger: TTTCTGTTTGGCCTGTGTTCATATTAGTGAGCATGG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGGGAAGAAAGAGAGGTaGCAAATGTACATGAAGCTT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIGKKER*QMYMKL
Trigger: AAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAGCTTCACACCCTTTTaGGCCATGTGTGGAATAATT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFISFTPF*AMCGII
Trigger: AATTATTCCACACATGGCTCAAAAGGGTGTGAAGCT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394168.1
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGAGACCATTTCCATTTaGTTTTGCCAGGAACGAATG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGETISI*FCQERM
Trigger: CATTCGTTCCTGGCAAAAGCAAATGGAAATGGTCTC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGAAAAAGGGGAAATCTaGAACTTGGACATTGGCACA +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIEKGEI*NLDIGT
Trigger: TGTGCCAATGTCCAAGTTGCAGATTTCCCCTTTTTC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAAAGTGCTACAATTTTTaGCAGGAGTTCCCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGKCYNF*QEFPSF
Trigger: GAAGCTTGGGAACTCCTGCCAAAAATTGTAGCACTT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACTCAGACTTTTGTCCTaGAAGGAATTGTTACACGTC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGLRLLS*KELLHV
Trigger: GACGTGTAACAATTCCTTCCAGGACAAAAGTCTGAG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAAAGCCTATGAAATCATaGAGTTTAGGGCAGGGTGTT +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGKPMKS*SLGQGV
Trigger: AACACCCTGCCCTAAACTCCATGATTTCATAGGCTT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGTCATCATGGAAGGATaGTTACCAAATGACCCAATT +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGVIMEG*LPNDPI
Trigger: AATTGGGTCATTTGGTAATCATCCTTCCATGATGAC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGGTGACAAATGTACATaGAGCTTATCTTGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIGDKCT*SLSCLL
Trigger: CAAGAGACAAGATAAGCTTCATGTACATTTGTCACC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGGCTGCAGAATATCCTaGATTAGTCAAGTCATCATT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIGCRIS*ISQVII
Trigger: AATGATGACTTGACTAATGCAGGATATTCTGCAGCC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAAGAAATGTTTCCTTCTaGAGAGACCACGATGTGATT +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGRNVSF*RDHDVI
Trigger: AATCACATCGTGGTCTCTGCAGAAGGAAACATTTCT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR GCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAGAAATGTTTCCTTCTaGAGAGACCACGATGTGATT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIRNVSF*RDHDVI
Trigger: AATCACATCGTGGTCTCTGCAGAAGGAAACATTTCT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACATCTGGATAGGCTTTaGCTGTATATTAATTGGGAC +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGHLDRL*LYINWD
Trigger: GTCCCAATTAATATACAGCCAAAGCCTATCCAGATG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCATCTGGATAGGCTTTaGCTGTATATTAATTGGGAC +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIHLDRL*LYINWD
Trigger: GTCCCAATTAATATACAGCCAAAGCCTATCCAGATG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR TCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACAGCTTTATCAAGTTTaGAGGAACAACAGAAATCAG +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGQLYQV*RNNRNQ
Trigger: CTGATTTCTGTTGTTCCTTCAAACTTGATAAAGCTG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATTTTTAGGAGCTGAGTaGCAACTGTCTCAAATTCAT +
Preference number: 4 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGFLGAE*QLSQIH
Trigger: ATGAATTTGAGACAGTTGCCACTCAGCTCCTAAAAA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTTTTTAGGAGCTGAGTaGCAACTGTCTCAAATTCAT +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIFLGAE*QLSQIH
Trigger: ATGAATTTGAGACAGTTGCCACTCAGCTCCTAAAAA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CCA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTATGGTAACCCTAAAATaGGCCAGATTTTCCAATTTG +
Preference number: 4 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIMVTLK*ARFSNL
Trigger: CAAATTGGAAAATCTGGCCCATTTTAGGGTTACCAT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp CGCCCGCCCGGCCTTCATGCTCTGCGCCCGGGCAAACCGCTCGCCTaGTCGTCTACCTCCAAACTTCGGTTCTCGCCCCAGCGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: RPPGLHALRPGKPLA*SSTSKLRFSPQRGR
Trigger: CCGGCCGCGCTGGGGCGAGAACCGAAGTTTGGAGGTAGACGAGCAGGCGAGCGGTTTGCCCGGGCGCAGAGCATGAAGGCCGGGCGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614467.4
CDS CCA 90 bp TGGATGAGGTTTTCCGGTGCCCCTCAGGGCCGGGAGAGCACTGACTaGCCTTCAGAGGCTCTCTCCGGCTGGCCTTCTCTTCAGACGTGC +
Preference number: 5 (lower is better)
Translates to: WMRFSGAPQGRESTD*PSEALSGWPSLQTC
Trigger: GCACGTCTGAAGAGAAGGCCAGCCGGAGAGAGCCTCTGAAGGCCAGTCAGTGCTCTCCCGGCCCTGAGGGGCACCGGAAAACCTCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 90 bp GATCTGGATGAGGTTTTCCGGTGCCCCTCAGGGCCGGGAGAGCACTaGCTGGCCTTCAGAGGCTCTCTCCGGCTGGCCTTCTCTTCAGAC +
Preference number: 5 (lower is better)
Translates to: DLDEVFRCPSGPGEH*LAFRGSLRLAFSSD
Trigger: GTCTGAAGAGAAGGCCAGCCGGAGAGAGCCTCTGAAGGCCAGTCAGTGCTCTCCCGGCCCTGAGGGGCACCGGAAAACCTCATCCAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp TCCTGCCCTGGCAGTGTGGTGCTCAAGAGCCCAGGGATCTGTGCTTaGCTCAGGCCGTCTGTGGTCTTGGGAGCAGAAATGGGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: SCPGSVVLKSPGICA*LRPSVVLGAEMGEV
Trigger: GACTTCCCCCATTTCTGCTCCCAAGACCACAGACGGCCTGAGGCAAGCACAGATCCCTGGGCTCTTGAGCACCACACTGCCAGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp ACACCGGTTTTGGCTCGGTCTCTGCCTTGGGCCTTGGCTGGCGGTTaGAGAGAGCTGCTTGCTTTACTGCCATGCTGGTCACTCCGGCCA +
Preference number: 5 (lower is better)
Translates to: TPVLARSLPWALAGG*RELLALLPCWSLRP
Trigger: TGGCCGGAGTGACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp AGAATCCTGCCCTGGCAGTGTGGTGCTCAAGAGCCCAGGGATCTGTaGTTGCCTCAGGCCGTCTGTGGTCTTGGGAGCAGAAATGGGGGA +
Preference number: 5 (lower is better)
Translates to: RILPWQCGAQEPRDL*LPQAVCGLGSRNGG
Trigger: TCCCCCATTTCTGCTCCCAAGACCACAGACGGCCTGAGGCAAGCACAGATCCCTGGGCTCTTGAGCACCACACTGCCAGGGCAGGATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp TGGCTCGGTCTCTGCCTTGGGCCTTGGCTGGCGGTTGCAGAGAGCTaGTTGCTTTACTGCCATGCTGGTCACTCCGGCCAAACTGTGTCT +
Preference number: 5 (lower is better)
Translates to: WLGLCLGPWLAVAES*LLYCHAGHSGQTVS
Trigger: AGACACAGTTTGGCCGGAGTGACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp TGGGTTCCGTCACACCGGTTTTGGCTCGGTCTCTGCCTTGGGCCTTaGCTGGCGGTTGCAGAGAGCTGCTTGCTTTACTGCCATGCTGGT +
Preference number: 5 (lower is better)
Translates to: WVPSHRFWLGLCLGP*LAVAESCLLYCHAG
Trigger: ACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp TCGGTCTCTGCCTTGGGCCTTGGCTGGCGGTTGCAGAGAGCTGCTTaGTTTACTGCCATGCTGGTCACTCCGGCCAAACTGTGTCTCATG +
Preference number: 5 (lower is better)
Translates to: SVSALGLGWRLQRAA*FTAMLVTPAKLCLM
Trigger: CATGAGACACAGTTTGGCCGGAGTGACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp TTCCGTCACACCGGTTTTGGCTCGGTCTCTGCCTTGGGCCTTGGCTaGCGGTTGCAGAGAGCTGCTTGCTTTACTGCCATGCTGGTCACT +
Preference number: 5 (lower is better)
Translates to: FRHTGFGSVSALGLG*RLQRAACFTAMLVT
Trigger: AGTGACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCGCAGCAGGCCTTTTTaGTCCTCCCGAATGACTCTC +
Preference number: 5 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCRSRPF*SSRMTL
Trigger: GAGAGTCATTCGGGAGGACAAAAAAGGCCTGCTGCG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp GATGGCATGGTGGCGAAGCCAGGTCTTCCTTGGGAAACGCTGCTCTaGCCAGGTGACAGGTGTAATACAGTTGGGGATGCCTGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: DGMVAKPGLPWETLL*PGDRCNTVGDACCK
Trigger: CTTGCAGCAGGCATCCCCAACTGTATTACACCTGTCACCTGGGCAGAGCAGCGTTTCCCAAGGAAGACCTGGCTTCGCCACCATGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp TCACCGATGGCATGGTGGCGAAGCCAGGTCTTCCTTGGGAAACGCTaGTCTGCCCAGGTGACAGGTGTAATACAGTTGGGGATGCCTGCT +
Preference number: 5 (lower is better)
Translates to: SPMAWWRSQVFLGKR*SAQVTGVIQLGMPA
Trigger: AGCAGGCATCCCCAACTGTATTACACCTGTCACCTGGGCAGAGCAGCGTTTCCCAAGGAAGACCTGGCTTCGCCACCATGCCATCGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp TGCCTTGGGCCTTGGCTGGCGGTTGCAGAGAGCTGCTTGCTTTACTaGCATGCTGGTCACTCCGGCCAAACTGTGTCTCATGAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: CLGPWLAVAESCLLY*HAGHSGQTVSHEQL
Trigger: AAGCTGCTCATGAGACACAGTTTGGCCGGAGTGACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp GGTCATGATTCATGGGTTCCGTCACACCGGTTTTGGCTCGGTCTCTaGCTTGGGCCTTGGCTGGCGGTTGCAGAGAGCTGCTTGCTTTAC +
Preference number: 5 (lower is better)
Translates to: GHDSWVPSHRFWLGL*LGPWLAVAESCLLY
Trigger: GTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGAACCCATGAATCATGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCTGGCAGAAGAATTGTaGCTGGGTTCCTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCLAEEL*LGSCSR
Trigger: CCTGGAACAGGAACCCAGCAACAATTCTTCTGCCAG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp CTAGATGAAACTGGTCATGATTCATGGGTTCCGTCACACCGGTTTTaGCTCGGTCTCTGCCTTGGGCCTTGGCTGGCGGTTGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LDETGHDSWVPSHRF*LGLCLGPWLAVAES
Trigger: GCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGAACCCATGAATCATGACCAGTTTCATCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp CTGCTAGGATGCTTGACAGTTTGCTCTCAGTACCATGATCCGATCTaGATGAGGTTTTCCGGTGCCCCTCAGGGCCGGGAGAGCACTGAC +
Preference number: 5 (lower is better)
Translates to: LLGCLTVCSQYHDPI*MRFSGAPQGRESTD
Trigger: GTCAGTGCTCTCCCGGCCCTGAGGGGCACCGGAAAACCTCATCCAGATCGGATCATGGTACTGAGAGCAAACTGTCAAGCATCCTAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGCCCTCCACTCACATTaGATGGGGCTTGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVALHSH*MGLAAR
Trigger: GCGGGCAGCAAGCCCCATCAAATGTGAGTGGAGGGC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCAGCAAAAGAGATCCCTaGTTGTACGTGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCSKRDP*LYVVLL
Trigger: CAGCAGCACCACGTACAACAAGGGATCTCTTTTGCT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCACGTGGTGTACCGAGTaGGAACTGACAGAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCTWCTE*ELTERL
Trigger: AAGCCTTTCTGTCAGTTCCAACTCGGTACACCACGT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCGGTCCAGTATATGGTaGGTTGGTCCTGAGCATGTT +
Preference number: 5 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCRSSIW*VGPEHV
Trigger: AACATGCTCAGGACCAACCAACCATATACTGGACCG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGACAGGGCATATCCTTaGGCTCTCAAATGGGAATCC +
Preference number: 5 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCDRAYP*ALKWES
Trigger: GGATTCCCATTTGAGAGCCAAAGGATATGCCCTGTC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCCCAGTATATGGTTGGTaGGTCCTGAGCATGTTGGAA +
Preference number: 5 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCPVYGW*VLSMLE
Trigger: TTCCAACATGCTCAGGACCAACCAACCATATACTGG...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGGCTCGGTCTCTGCCTaGGGCCTTGGCTGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSGSVSA*GLGWRL
Trigger: CAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCGGCTCGGTCTCTGCCTaGGGCCTTGGCTGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVGSVSA*GLGWRL
Trigger: CAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCC...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGCCAGATTTTCCAATTaGTATTGGCTGGGGCATGTG +
Preference number: 5 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCARFSN*YWLGHV
Trigger: CACATGCCCCAGCCAATACAAATTGGAAAATCTGGC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 90 bp AAGTGCGAATCTGCTAGGATGCTTGACAGTTTGCTCTCAGTACCATaGTCCGATCTGGATGAGGTTTTCCGGTGCCCCTCAGGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: KCESARMLDSLLSVP*SDLDEVFRCPSGPG
Trigger: TCCCGGCCCTGAGGGGCACCGGAAAACCTCATCCAGATCGGATCATGGTACTGAGAGCAAACTGTCAAGCATCCTAGCAGATTCGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp GACTGGCCTTCAGAGGCTCTCTCCGGCTGGCCTTCTCTTCAGACGTaGTCTGGTACTGCACTAAGCCCACTTTGTCAAATTTCAGTGCTC +
Preference number: 5 (lower is better)
Translates to: DWPSEALSGWPSLQT*SGTALSPLCQISVL
Trigger: GAGCACTGAAATTTGACAAAGTGGGCTTAGTGCAGTACCAGAGCACGTCTGAAGAGAAGGCCAGCCGGAGAGAGCCTCTGAAGGCCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCAAAAGAGATCCCTTGTaGTACGTGGTGCTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCKRDPL*YVVLLN
Trigger: ATTCAGCAGCACCACGTACAACAAGGGATCTCTTTT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTTGGGGTGCGTGAGGTaGGCCCATGGGGGAATGAAT +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVLGCVR*AHGGMN
Trigger: ATTCATTCCCCCATGGGCCAACCTCACGCACCCCAA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGAAGCCAGGTCTTCCTaGGGAAACGCTGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPEARSS*GNAALP
Trigger: GGGCAGAGCAGCGTTTCCCAAGGAAGACCTGGCTTC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGGCCTTGGCTGGCGGTaGCAGAGAGCTGCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPGLGWR*QRAACF
Trigger: AAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCTGTTTTGGTAATGAATaGCTGCCAGGGGTCACTACT +
Preference number: 5 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCCFGNE*LPGVTT
Trigger: AGTAGTGACCCCTGGCAGCAATTCATTACCAAAACA...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp TGGTGCTCAAGAGCCCAGGGATCTGTGCTTGCCTCAGGCCGTCTGTaGTCTTGGGAGCAGAAATGGGGGAAGTCTGATTCAGACATTTTT +
Preference number: 5 (lower is better)
Translates to: WCSRAQGSVLASGRL*SWEQKWGKSDSDIF
Trigger: AAAAATGTCTGAATCAGACTTCCCCCATTTCTGCTCCCAAGACCACAGACGGCCTGAGGCAAGCACAGATCCCTGGGCTCTTGAGCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCCCAGGGATCTGTGCTaGCCTCAGGCCGTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGPRDLC*PQAVCG
Trigger: ACCACAGACGGCCTGAGGCAAGCACAGATCCCTGGG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCGCAGCAGGCCTTTTTaGTCCTCCCGAATGACTCTC +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVRSRPF*SSRMTL
Trigger: GAGAGTCATTCGGGAGGACAAAAAAGGCCTGCTGCG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTGTCACAGTGTGGGCTaGGTCCCTCTGCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPCHSVG*VPLQLL
Trigger: CAGCAGTTGCAGAGGGACCAAGCCCACACTGTGACA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 90 bp GAACTAGAGTTCCCAAACAAGGAGTTGCCATTAGGAGTCTGTCTATaGACCAGGAGCCCTCCACTCACATTTGATGGGGCTTGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: ELEFPNKELPLGVCL*TRSPPLTFDGACCP
Trigger: CGGGCAGCAAGCCCCATCAAATGTGAGTGGAGGGCTCCTGGTTCATAGACAGACTCCTAATGGCAACTCCTTGTTTGGGAACTCTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGCCCTCCACTCACATTaGATGGGGCTTGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVALHSH*MGLAAR
Trigger: GCGGGCAGCAAGCCCCATCAAATGTGAGTGGAGGGC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCGGACTTTATTTGAATTaGGTGCAAGACCCCTTTGTA +
Preference number: 5 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCGLYLN*VQDPFV
Trigger: TACAAAGGGGTCTTGCACCAAATTCAAATAAAGTCC...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGAAGCCAGGTCTTCCTaGGGAAACGCTGCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSEARSS*GNAALP
Trigger: GGGCAGAGCAGCGTTTCCCAAGGAAGACCTGGCTTC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTAGCCTGGCAGAAGAATaGTTGCTGGGTTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVSLAEE*LLGSCS
Trigger: GGAACAGGAACCCAGCAACAATTCTTCTGCCAGGCT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCCCAGGGATCTGTGCTaGCCTCAGGCCGTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVPRDLC*PQAVCG
Trigger: ACCACAGACGGCCTGAGGCAAGCACAGATCCCTGGG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGGCCTTGGCTGGCGGTaGCAGAGAGCTGCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGGLGWR*QRAACF
Trigger: AAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTCCGTCACACCGGTTTaGGCTCGGTCTCTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVSVTPV*ARSLPW
Trigger: CCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTCCGTCACACCGGTTTaGGCTCGGTCTCTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGSVTPV*ARSLPW
Trigger: CCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGGGGTCATCCCCATGTaGGCGACAGCCAGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSGVIPM*ATARSR
Trigger: TCTGCTTCTGGCTGTCGCCAACATGGGGATGACCCC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp TTGCATAAAGCCATGTTGTACACCCACTGTATTGCTTGCAAACGATaGTCCAACAGGCACATGCGTCACCCCTATAGGCTGCAGCGTCTG +
Preference number: 5 (lower is better)
Translates to: LHKAMLYTHCIACKR*SNRHMRHPYRLQRL
Trigger: CAGACGCTGCAGCCTATAGGGGTGACGCATGTGCCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTACAACATGGCTTTATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp GGAACTGACAGAAAGGCTTGTAGGTATAAGGAACTGACTTTGGGGTaGGTGAGGTTGGCCCATGGGGGAATGAATAACAATACTGCCCCC +
Preference number: 5 (lower is better)
Translates to: GTDRKACRYKELTLG*VRLAHGGMNNNTAP
Trigger: GGGGGCAGTATTGTTATTCATTCCCCCATGGGCCAACCTCACGCACCCCAAAGTCAGTTCCTTATACCTACAAGCCTTTCTGTCAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp ACAAGTGCCAAACGCTTGTCTCGGGACAGGGAAGCTCTTTCCTCCTaGTTGAACATCCTATCGATCATCACCATCTCAGCAGAGGGATTG +
Preference number: 5 (lower is better)
Translates to: TSAKRLSRDREALSS*LNILSIITISAEGL
Trigger: CAATCCCTCTGCTGAGATGGTGATGATCGATAGGATGTTCAACCAGGAGGAAAGAGCTTCCCTGTCCCGAGACAAGCGTTTGGCACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTATAAGGAACTGACTTaGGGGTGCGTGAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPYKELT*GCVRLA
Trigger: GGCCAACCTCACGCACCCCAAAGTCAGTTCCTTATA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp TGGCTTTTCCACCAGGGCTGCGGGTCCCTGGCAGCACAGCCAGCAATTTACTGCACTGTCTCAAATTCATaGTCCACTTTTCTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: WLFHQGCGSLAAQPAIYCTVSNS*STFLKS
Trigger: AGACTTGAGAAAAGTGGACAATGAATTTGAGACAGT...GCAGTAAATTGCTGGCTGTGCTGCCAGGGACCCGCAGCCCTGGTGGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGGCCTTGGCTGGCGGTaGCAGAGAGCTGCTTGCTTT +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVGLGWR*QRAACF
Trigger: AAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGGCTCGGTCTCTGCCTaGGGCCTTGGCTGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIGSVSA*GLGWRL
Trigger: CAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGGGGTCATCCCCATGTaGGCGACAGCCAGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVGVIPM*ATARSR
Trigger: TCTGCTTCTGGCTGTCGCCAACATGGGGATGACCCC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp TACACGTCATCTCCAAGTGCGAATCTGCTAGGATGCTTGACAGTTTaGTCTCAGTACCATGATCCGATCTGGATGAGGTTTTCCGGTGCC +
Preference number: 5 (lower is better)
Translates to: YTSSPSANLLGCLTV*SQYHDPIWMRFSGA
Trigger: GGCACCGGAAAACCTCATCCAGATCGGATCATGGTACTGAGAGCAAACTGTCAAGCATCCTAGCAGATTCGCACTTGGAGATGACGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp GTGCTGCTCACTGCCTGTGAGGTGACTGGCTTTCTTGTGTTCTGTTaGTTTACAATGTTCACAGACATGTGTGGACCAACTACTGAGCCC +
Preference number: 5 (lower is better)
Translates to: VLLTACEVTGFLVFC*FTMFTDMCGPTTEP
Trigger: GGGCTCAGTAGTTGGTCCACACATGTCTGTGAACATTGTAAACCAACAGAACACAAGAAAGCCAGTCACCTCACAGGCAGTGAGCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp GAGGCAGCAAATGTCTGCCCAGACACTAAGTGGACAGCAGTATTCTaGTTGTTAAGCATCGGTCCAGTATATGGTTGGTTGGTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: EAANVCPDTKWTAVF*LLSIGPVYGWLVLS
Trigger: GCTCAGGACCAACCAACCATATACTGGACCGATGCTTAACAACCAGAATACTGCTGTCCACTTAGTGTCTGGGCAGACATTTGCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGAAACTGGAGGCTACTaGAAAGTGGCAGTCCATCAC +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPETGGY*KVAVHH
Trigger: GTGATGGACTGCCACTTTCAAGTAGCCTCCAGTTTC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTAAGAATGTCGAAAGGTaGGTCCTCAGTGAGATCAGG +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVKNVER*VLSEIR
Trigger: CCTGATCTCACTGAGGACCAACCTTTCGACATTCTT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGTGCAAACTGTTGGCTaGAACCTATACTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVVQTVG*NLYWHP
Trigger: TGGATGCCAGTATAGGTTCAAGCCAACAGTTTGCAC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTAGCAAAAGAGATCCCTaGTTGTACGTGGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPSKRDP*LYVVLL
Trigger: CAGCAGCACCACGTACAACAAGGGATCTCTTTTGCT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGCCCTGGGGTGAGCTaGCAGAAGCAAAAGAGATCC +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVSPGVS*QKQKRS
Trigger: GGATCTCTTTTGCTTCTGCAAGCTCACCCCAGGGCT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTTGGGGTGCGTGAGGTaGGCCCATGGGGGAATGAAT +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLGCVR*AHGGMN
Trigger: ATTCATTCCCCCATGGGCCAACCTCACGCACCCCAA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTGTCACAGTGTGGGCTaGGTCCCTCTGCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVCHSVG*VPLQLL
Trigger: CAGCAGTTGCAGAGGGACCAAGCCCACACTGTGACA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGCCAGATTTTCCAATTaGTATTGGCTGGGGCATGTG +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVARFSN*YWLGHV
Trigger: CACATGCCCCAGCCAATACAAATTGGAAAATCTGGC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 90 bp GGGGGAATGAATAACAATACTGCCCCCAGTGCTGCTCACTGCCTGTaGGGTGACTGGCTTTCTTGTGTTCTGTTGGTTTACAATGTTCAC +
Preference number: 5 (lower is better)
Translates to: GGMNNNTAPSAAHCL*GDWLSCVLLVYNVH
Trigger: GTGAACATTGTAAACCAACAGAACACAAGAAAGCCAGTCACCTCACAGGCAGTGAGCAGCACTGGGGGCAGTATTGTTATTCATTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 90 bp GGTCCTGAGCATGTTGGAAGAGTTTCTGTTCAACATGACATGCTCTaGGGCCACTTGGCCAGAAATGAGCTGAGAGGGTTGAGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: GPEHVGRVSVQHDML*GHLARNELRGLSLK
Trigger: CTTCAAACTCAACCCTCTCAGCTCATTTCTGGCCAAGTGGCCTCAGAGCATGTCATGTTGAACAGAAACTCTTCCAACATGCTCAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp ACCTGCACAGCTGGATGGCCAGGAGATGATCCAACTACTTTTTCCTaGTGTGGTTGTGCGGTTCCTAAGGATGCGGATATAACTTTGCTT +
Preference number: 5 (lower is better)
Translates to: TCTAGWPGDDPTTFS*CGCAVPKDADITLL
Trigger: AAGCAAAGTTATATCCGCATCCTTAGGAACCGCACAACCACAGCAGGAAAAAGTAGTTGGATCATCTCCTGGCCATCCAGCTGTGCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGTGCAAACTGTTGGCTaGAACCTATACTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPVQTVG*NLYWHP
Trigger: TGGATGCCAGTATAGGTTCAAGCCAACAGTTTGCAC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTACTGATCCCCACATGTaGCATAAAGCCATGTTGTAC +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVTDPHM*HKAMLY
Trigger: GTACAACATGGCTTTATGCAACATGTGGGGATCAGT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGCCCTCCACTCACATTaGATGGGGCTTGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIALHSH*MGLAAR
Trigger: GCGGGCAGCAAGCCCCATCAAATGTGAGTGGAGGGC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTGGTGCAAGACCCCTTaGTATGATGATGTTATGCAC +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVWCKTP*YDDVMH
Trigger: GTGCATAACATCATCATACAAAGGGGTCTTGCACCA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATATAAGGAACTGACTTaGGGGTGCGTGAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSYKELT*GCVRLA
Trigger: GGCCAACCTCACGCACCCCAAAGTCAGTTCCTTATA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGCCTGGCAGAAGAATaGTTGCTGGGTTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVSLAEE*LLGSCS
Trigger: GGAACAGGAACCCAGCAACAATTCTTCTGCCAGGCT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGACCCAGGGATCTGTGCTaGCCTCAGGCCGTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGPRDLC*PQAVCG
Trigger: ACCACAGACGGCCTGAGGCAAGCACAGATCCCTGGG...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTAGCAGGCATCTGTATTaGTTAAGCATAGCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVSRHLY*LSIAWV
Trigger: GACCCAAGCTATGCTTAACAAATACAGATGCCTGCT...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGTTGCAGAGAGCTGCTaGCTTTACTGCCATGCTGGT +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSVAESC*LYCHAG
Trigger: ACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAAC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTGCACTAAGCCCACTTaGTCAAATTTCAGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVCTKPT*SNFSAL
Trigger: CAGAGCACTGAAATTTGACAAAGTGGGCTTAGTGCA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTTTGATGCTTGGTATTaGTTGTGGGAGAGGGTGCAA +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVFDAWY*LWERVQ
Trigger: TTGCACCCTCTCCCACAACAAATACCAAGCATCAAA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp GGAAGGAATTGTTACACGTCATCTCCAAGTGCGAATCTGCTAGGATaGTTGACAGTTTGCTCTCAGTACCATGATCCGATCTGGATGAGG +
Preference number: 5 (lower is better)
Translates to: GRNCYTSSPSANLLG*LTVCSQYHDPIWMR
Trigger: CCTCATCCAGATCGGATCATGGTACTGAGAGCAAACTGTCAAGCATCCTAGCAGATTCGCACTTGGAGATGACGTGTAACAATTCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp ATCACTGGACTTCCAGAGGCAGCAAATGTCTGCCCAGACACTAAGTaGACAGCAGTATTCTGGTTGTTAAGCATCGGTCCAGTATATGGT +
Preference number: 5 (lower is better)
Translates to: ITGLPEAANVCPDTK*TAVFWLLSIGPVYG
Trigger: ACCATATACTGGACCGATGCTTAACAACCAGAATACTGCTGTCCACTTAGTGTCTGGGCAGACATTTGCTGCCTCTGGAAGTCCAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp AGTTCCAAGATGTTCTTAAATGTGGTTTCCAAGCTCTTTGTCAGCTaGAGATCTGGCTGGGGTTCGCCTGACCCTTTCATGATGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SSKMFLNVVSKLFVS*RSGWGSPDPFMMSV
Trigger: CACAGACATCATGAAAGGGTCAGGCGAACCCCAGCCAGATCTCCAGCTGACAAAGAGCTTGGAAACCACATTTAAGAACATCTTGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGAAGTGCTACAATTTTaGGCAGGAGTTCCCAAGCTT +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPEVLQF*AGVPKL
Trigger: AAGCTTGGGAACTCCTGCCAAAAATTGTAGCACTTC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGAAACTGGAGGCTACTaGAAAGTGGCAGTCCATCAC +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGETGGY*KVAVHH
Trigger: GTGATGGACTGCCACTTTCAAGTAGCCTCCAGTTTC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCACCCACTGTATTGCTaGCAAACGATGCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGHPLYC*QTMLQQ
Trigger: CTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTTCCCAAACAAGGAGTaGCCATTAGGAGTCTGTCTA +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPFPNKE*PLGVCL
Trigger: TAGACAGACTCCTAATGGCAACTCCTTGTTTGGGAA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTCACATTGTATGTATTTaGCTGACCCATCTGGATAGG +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVHIVCI*LTHLDR
Trigger: CCTATCCAGATGGGTCAGCAAAATACATACAATGTG...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAGCCCTGGGGTGAGCTaGCAGAAGCAAAAGAGATCC +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGSPGVS*QKQKRS
Trigger: GGATCTCTTTTGCTTCTGCAAGCTCACCCCAGGGCT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAACGTGGTGTACCGAGTaGGAACTGACAGAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSTWCTE*ELTERL
Trigger: AAGCCTTTCTGTCAGTTCCAACTCGGTACACCACGT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACGGTCCAGTATATGGTaGGTTGGTCCTGAGCATGTT +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSRSSIW*VGPEHV
Trigger: AACATGCTCAGGACCAACCAACCATATACTGGACCG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCACAGGTGTAATACAGTaGGGGATGCCTGCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVTGVIQ*GMPAAR
Trigger: CCTTGCAGCAGGCATCCCCAACTGTATTACACCTGT...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCTGGCAGAAGAATTGTaGCTGGGTTCCTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLAEEL*LGSCSR
Trigger: CCTGGAACAGGAACCCAGCAACAATTCTTCTGCCAG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCCGCAGCAGGCCTTTTTaGTCCTCCCGAATGACTCTC +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGRSRPF*SSRMTL
Trigger: GAGAGTCATTCGGGAGGACAAAAAAGGCCTGCTGCG...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGTTGCAGAGAGCTGCTaGCTTTACTGCCATGCTGGT +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVVAESC*LYCHAG
Trigger: ACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAAC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTCCGTCACACCGGTTTaGGCTCGGTCTCTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFISVTPV*ARSLPW
Trigger: CCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTTTGATGCTTGGTATTaGTTGTGGGAGAGGGTGCAA +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPFDAWY*LWERVQ
Trigger: TTGCACCCTCTCCCACAACAAATACCAAGCATCAAA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTGGTTTGTCTGTGTTTaGGTAATGAATTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVWFVCV*VMNCCQ
Trigger: CTGGCAGCAATTCATTACCAAAACACAGACAAACCA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCGACAGGGCATATCCTTaGGCTCTCAAATGGGAATCC +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVDRAYP*ALKWES
Trigger: GGATTCCCATTTGAGAGCCAAAGGATATGCCCTGTC...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 90 bp GGTCACTCCGGCCAAACTGTGTCTCATGAGCAGCTTTATCAAGTTTaGAGGAACAACAGAAATCAGCCTGAAAACCCTCAGGGTCTACAA +
Preference number: 5 (lower is better)
Translates to: GHSGQTVSHEQLYQV*RNNRNQPENPQGLQ
Trigger: TTGTAGACCCTGAGGGTTTTCAGGCTGATTTCTGTTGTTCCTTCAAACTTGATAAAGCTGCTCATGAGACACAGTTTGGCCGGAGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAAGAATGTCGAAAGGTaGGTCCTCAGTGAGATCAGG +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSKNVER*VLSEIR
Trigger: CCTGATCTCACTGAGGACCAACCTTTCGACATTCTT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAGAATGTCGAAAGGTaGGTCCTCAGTGAGATCAGG +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVKNVER*VLSEIR
Trigger: CCTGATCTCACTGAGGACCAACCTTTCGACATTCTT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCACCCACTGTATTGCTaGCAAACGATGCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVHPLYC*QTMLQQ
Trigger: CTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATGTACACCCACTGTATaGCTTGCAAACGATGCTCCA +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSCTPTV*LANDAP
Trigger: TGGAGCATCGTTTGCAAGCAATACAGTGGGTGTACA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTTGCATAAAGCCATGTaGTACACCCACTGTATTGCT +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPLHKAM*YTHCIA
Trigger: AGCAATACAGTGGGTGTACAACATGGCTTTATGCAA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTTGGGGTGCGTGAGGTaGGCCCATGGGGGAATGAAT +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFILGCVR*AHGGMN
Trigger: ATTCATTCCCCCATGGGCCAACCTCACGCACCCCAA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTCTGAGAGGGTTGAGTTaGAAGAAGTTGCCCATTTAT +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPLRGLS*KKLPIY
Trigger: ATAAATGGGCAACTTCTTCAAACTCAACCCTCTCAG...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCCAGTATATGGTTGGTaGGTCCTGAGCATGTTGGAA +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVPVYGW*VLSMLE
Trigger: TTCCAACATGCTCAGGACCAACCAACCATATACTGG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACCAGTATATGGTTGGTaGGTCCTGAGCATGTTGGAA +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSPVYGW*VLSMLE
Trigger: TTCCAACATGCTCAGGACCAACCAACCATATACTGG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCCTGGCAGAAGAATTGTaGCTGGGTTCCTGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGLAEEL*LGSCSR
Trigger: CCTGGAACAGGAACCCAGCAACAATTCTTCTGCCAG...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAGCCTGGCAGAAGAATaGTTGCTGGGTTCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGSLAEE*LLGSCS
Trigger: GGAACAGGAACCCAGCAACAATTCTTCTGCCAGGCT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATGTCACAGTGTGGGCTaGGTCCCTCTGCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGCHSVG*VPLQLL
Trigger: CAGCAGTTGCAGAGGGACCAAGCCCACACTGTGACA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATCTCAGCAGAGGGATaGATTCGCATGGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVISAEG*IRMASS
Trigger: AGAAGATGCCATGCGAATCAATCCCTCTGCTGAGAT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGCTCTTTCCTCCTGGTaGAACATCCTATCGATCATC +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSALSSW*NILSII
Trigger: GATGATCGATAGGATGTTCAACCAGGAGGAAAGAGC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGTTGCAGAGAGCTGCTaGCTTTACTGCCATGCTGGT +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGVAESC*LYCHAG
Trigger: ACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAAC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTGCCGTCCCGCCTTTTaGAGTTCCAAGATGTTCTTA +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGCRPAF*SSKMFL
Trigger: TAAGAACATCTTGGAACTCAAAAAGGCGGGACGGCA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGATGCTTGGTATTTGTaGTGGGAGAGGGTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGDAWYL*WERVQR
Trigger: TCTTTGCACCCTCTCCCACAACAAATACCAAGCATC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTGGTTTGTCTGTGTTTaGGTAATGAATTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPWFVCV*VMNCCQ
Trigger: CTGGCAGCAATTCATTACCAAAACACAGACAAACCA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATAGAAAAGCTAGGATaGGGACAGCAGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVIEKLG*GQQGRI
Trigger: TATCCTGCCCTGCTGTCCCAATCCTAGCTTTTCTAT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGATAGAAAAGCTAGGATaGGGACAGCAGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGIEKLG*GQQGRI
Trigger: TATCCTGCCCTGCTGTCCCAATCCTAGCTTTTCTAT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp CTGCTATTAGACAAATGCTGGCTGGGAACACTGATCCCCACATGTTaGATAAAGCCATGTTGTACACCCACTGTATTGCTTGCAAACGAT +
Preference number: 5 (lower is better)
Translates to: LLLDKCWLGTLIPTC*IKPCCTPTVLLAND
Trigger: ATCGTTTGCAAGCAATACAGTGGGTGTACAACATGGCTTTATGCAACATGTGGGGATCAGTGTTCCCAGCCAGCATTTGTCTAATAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp TTCTTAAATGTGGTTTCCAAGCTCTTTGTCAGCTGGAGATCTGGCTaGGGTTCGCCTGACCCTTTCATGATGTCTGTGTGTAAAACTTCA +
Preference number: 5 (lower is better)
Translates to: FLNVVSKLFVSWRSG*GSPDPFMMSVCKTS
Trigger: TGAAGTTTTACACACAGACATCATGAAAGGGTCAGGCGAACCCCAGCCAGATCTCCAGCTGACAAAGAGCTTGGAAACCACATTTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGAAGTGCTACAATTTTaGGCAGGAGTTCCCAAGCTT +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGEVLQF*AGVPKL
Trigger: AAGCTTGGGAACTCCTGCCAAAAATTGTAGCACTTC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314073.9
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTGGCGAAAATTGAATTaGAATTGGCTGCAGAATATC +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVWRKLN*NWLQNI
Trigger: GATATTCTGCAGCCAATTCAAATTCAATTTTCGCCA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGTCTGTTCAGTGATATaGGCCTCTTGCAAGGATTTC +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGVCSVI*ASCKDF
Trigger: GAAATCCTTGCAAGAGGCCAATATCACTGAACAGAC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACTGATCCCCACATGTaGCATAAAGCCATGTTGTAC +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVTDPHM*HKAMLY
Trigger: GTACAACATGGCTTTATGCAACATGTGGGGATCAGT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAACTGATCCCCACATGTaGCATAAAGCCATGTTGTAC +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSTDPHM*HKAMLY
Trigger: GTACAACATGGCTTTATGCAACATGTGGGGATCAGT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATGGTGCAAGACCCCTTaGTATGATGATGTTATGCAC +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSWCKTP*YDDVMH
Trigger: GTGCATAACATCATCATACAAAGGGGTCTTGCACCA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGAAAAGAGATCCCTTGTaGTACGTGGTGCTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGKRDPL*YVVLLN
Trigger: ATTCAGCAGCACCACGTACAACAAGGGATCTCTTTT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAGCCCTGGGGTGAGCTaGCAGAAGCAAAAGAGATCC +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFISPGVS*QKQKRS
Trigger: GGATCTCTTTTGCTTCTGCAAGCTCACCCCAGGGCT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTTTGAGTTTGAAGAAGTaGCCCATTTATAGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPLSLKK*PIYSLD
Trigger: GTCCAGACTATAAATGGGCAACTTCTTCAAACTCAA...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTTGGTCCTGAGCATGTaGGAAGAGTTTCTGTTCAAC +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGLVLSM*EEFLFN
Trigger: GTTGAACAGAAACTCTTCCAACATGCTCAGGACCAA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGAGCAGGCATCTGTATTaGTTAAGCATAGCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGSRHLY*LSIAWV
Trigger: GACCCAAGCTATGCTTAACAAATACAGATGCCTGCT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGCTCTTTCCTCCTGGTaGAACATCCTATCGATCATC +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVALSSW*NILSII
Trigger: GATGATCGATAGGATGTTCAACCAGGAGGAAAGAGC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTGCAGCTTTATCAAGTTaGAAGGAACAACAGAAATCA +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVAALSS*KEQQKS
Trigger: TGATTTCTGTTGTTCCTTCAAACTTGATAAAGCTGC...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTGCACTAAGCCCACTTaGTCAAATTTCAGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGCTKPT*SNFSAL
Trigger: CAGAGCACTGAAATTTGACAAAGTGGGCTTAGTGCA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTGCACTAAGCCCACTTaGTCAAATTTCAGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVCTKPT*SNFSAL
Trigger: CAGAGCACTGAAATTTGACAAAGTGGGCTTAGTGCA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTGCCGTCCCGCCTTTTaGAGTTCCAAGATGTTCTTA +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVCRPAF*SSKMFL
Trigger: TAAGAACATCTTGGAACTCAAAAAGGCGGGACGGCA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGGGAGACCATTTCCATTaGCTTTTGCCAGGAACGAAT +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGGDHFH*LLPGTN
Trigger: ATTCGTTCCTGGCAAAAGCAAATGGAAATGGTCTCC...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GTGGCTGGGGTGAAGGTACGTTGCTATTATGAAGACTGGCCATCTCACAGGGTTTTCTATCCGTCTCGTTaGATTTTAGTAAGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: VAGVKVRCYYEDWPSHRVFYPSR*ILVSLF
Trigger: GAACAGACTTACTAAAATCAAACGAGACGGATAGAA...AACCCTGTGAGATGGCCAGTCTTCATAATAGCAACGTACCTTCACCCCAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATTTGATGCTTGGTATTaGTTGTGGGAGAGGGTGCAA +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSFDAWY*LWERVQ
Trigger: TTGCACCCTCTCCCACAACAAATACCAAGCATCAAA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTGTTTTGGTAATGAATaGCTGCCAGGGGTCACTACT +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGCFGNE*LPGVTT
Trigger: AGTAGTGACCCCTGGCAGCAATTCATTACCAAAACA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATGTTTTGGTAATGAATaGCTGCCAGGGGTCACTACT +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSCFGNE*LPGVTT
Trigger: AGTAGTGACCCCTGGCAGCAATTCATTACCAAAACA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGTTAGGAAGGATCATCTaGCTAGGAATTAGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGLGRII*LGIRGA
Trigger: TGCTCCCCTAATTCCTAGCAAGATGATCCTTCCTAA...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTTAGGAAGGATCATCTaGCTAGGAATTAGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLGRII*LGIRGA
Trigger: TGCTCCCCTAATTCCTAGCAAGATGATCCTTCCTAA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTAGCTTATCTTGTCTCTaGAGAATTCCACTGATTTGC +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPSLSCL*RIPLIC
Trigger: GCAAATCAGTGGAATTCTCAAGAGACAAGATAAGCT...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCACAGCTTCACACCCTTTaGAGCCATGTGTGGAATAAT +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSQLHTL*SHVWNN
Trigger: ATTATTCCACACATGGCTCAAAAGGGTGTGAAGCTG...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394168.1
CDS TCA 90 bp CCTCTTGCAAGGATTTCTGAAGAATGTCGAAAGGTTGGTCCTCAGTaGGATCAGGAAGAGGAGAAGACTCGAGTTCATCTTCAAGAAACT +
Preference number: 5 (lower is better)
Translates to: PLARISEECRKVGPQ*DQEEEKTRVHLQET
Trigger: AGTTTCTTGAAGATGAACTCGAGTCTTCTCCTCTTCCTGATCTCACTGAGGACCAACCTTTCGACATTCTTCAGAAATCCTTGCAAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp TGGACAGCAGTATTCTGGTTGTTAAGCATCGGTCCAGTATATGGTTaGTTGGTCCTGAGCATGTTGGAAGAGTTTCTGTTCAACATGACA +
Preference number: 5 (lower is better)
Translates to: WTAVFWLLSIGPVYG*LVLSMLEEFLFNMT
Trigger: TGTCATGTTGAACAGAAACTCTTCCAACATGCTCAGGACCAACCAACCATATACTGGACCGATGCTTAACAACCAGAATACTGCTGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTGTACACCCACTGTATaGCTTGCAAACGATGCTCCA +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGCTPTV*LANDAP
Trigger: TGGAGCATCGTTTGCAAGCAATACAGTGGGTGTACA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTTGCATAAAGCCATGTaGTACACCCACTGTATTGCT +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLHKAM*YTHCIA
Trigger: AGCAATACAGTGGGTGTACAACATGGCTTTATGCAA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTGGTGCAAGACCCCTTaGTATGATGATGTTATGCAC +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVWCKTP*YDDVMH
Trigger: GTGCATAACATCATCATACAAAGGGGTCTTGCACCA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCACATTGTATGTATTTaGCTGACCCATCTGGATAGG +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGHIVCI*LTHLDR
Trigger: CCTATCCAGATGGGTCAGCAAAATACATACAATGTG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCACATTGTATGTATTTaGCTGACCCATCTGGATAGG +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVHIVCI*LTHLDR
Trigger: CCTATCCAGATGGGTCAGCAAAATACATACAATGTG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTATAAGGAACTGACTTaGGGGTGCGTGAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIYKELT*GCVRLA
Trigger: GGCCAACCTCACGCACCCCAAAGTCAGTTCCTTATA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCTGAGAGGGTTGAGTTaGAAGAAGTTGCCCATTTAT +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGLRGLS*KKLPIY
Trigger: ATAAATGGGCAACTTCTTCAAACTCAACCCTCTCAG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCAGCAGGCATCTGTATTaGTTAAGCATAGCTTGGGTC +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVSRHLY*LSIAWV
Trigger: GACCCAAGCTATGCTTAACAAATACAGATGCCTGCT...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTCTATCCCGGCCTCCTCTGTACACTGTGCCTCTTAACTGGTTTCCATTTTCCTGCAGCTTTATCAAGTTaGAAGGAACAACAGAAATCA +
Preference number: 5 (lower is better)
Translates to: LYPGLLCTLCLLTGFHFPAALSS*KEQQKS
Trigger: TGATTTCTGTTGTTCCTTCAAACTTGATAAAGCTGC...AGGAAAATGGAAACCAGTTAAGAGGCACAGTGTACAGAGGAGGCCGGGATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGATGCTTGGTATTTGTaGTGGGAGAGGGTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGDAWYL*WERVQR
Trigger: TCTTTGCACCCTCTCCCACAACAAATACCAAGCATC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTGGTTTGTCTGTGTTTaGGTAATGAATTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVWFVCV*VMNCCQ
Trigger: CTGGCAGCAATTCATTACCAAAACACAGACAAACCA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCTTAGGAAGGATCATCTaGCTAGGAATTAGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLGRII*LGIRGA
Trigger: TGCTCCCCTAATTCCTAGCAAGATGATCCTTCCTAA...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp TTGAAAATTTGTGCTGTTAAATGGAACGGTAACAGGCTGTGCTACTaGACTGGAACTAGAGTTCCCAAACAAGGAGTTGCCATTAGGAGT +
Preference number: 5 (lower is better)
Translates to: LKICAVKWNGNRLCY*TGTRVPKQGVAIRS
Trigger: ACTCCTAATGGCAACTCCTTGTTTGGGAACTCTAGTTCCAGTCCAGTAGCACAGCCTGTTACCGTTCCATTTAACAGCACAAATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGAGTGATATTGGCCTCTaGCAAGGATTTCTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGSDIGL*QGFLKN
Trigger: ATTCTTCAGAAATCCTTGCAAGAGGCCAATATCACT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGTGATATTGGCCTCTaGCAAGGATTTCTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVSDIGL*QGFLKN
Trigger: ATTCTTCAGAAATCCTTGCAAGAGGCCAATATCACT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCACCCACTGTATTGCTaGCAAACGATGCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIHPLYC*QTMLQQ
Trigger: CTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAGGACTTTATTTGAATTaGGTGCAAGACCCCTTTGTA +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSGLYLN*VQDPFV
Trigger: TACAAAGGGGTCTTGCACCAAATTCAAATAAAGTCC...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAAAAGAGATCCCTTGTaGTACGTGGTGCTGCTGAAT +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGKRDPL*YVVLLN
Trigger: ATTCAGCAGCACCACGTACAACAAGGGATCTCTTTT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTACGTGGTGTACCGAGTaGGAACTGACAGAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFITWCTE*ELTERL
Trigger: AAGCCTTTCTGTCAGTTCCAACTCGGTACACCACGT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTTGAGTTTGAAGAAGTaGCCCATTTATAGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVLSLKK*PIYSLD
Trigger: GTCCAGACTATAAATGGGCAACTTCTTCAAACTCAA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCCTGAGAGGGTTGAGTTaGAAGAAGTTGCCCATTTAT +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVLRGLS*KKLPIY
Trigger: ATAAATGGGCAACTTCTTCAAACTCAACCCTCTCAG...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTCGGTCCAGTATATGGTaGGTTGGTCCTGAGCATGTT +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIRSSIW*VGPEHV
Trigger: AACATGCTCAGGACCAACCAACCATATACTGGACCG...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCACAGCAGTATTCTGGTaGTTAAGCATCGGTCCAGTA +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGTAVFW*LSIGPV
Trigger: TACTGGACCGATGCTTAACAACCAGAATACTGCTGT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCGCCATAGGAGAAAAGTaGGGGAAATCTAACTCAACA +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVAIGEK*GKSNST
Trigger: TGTTGAGTTAGATTTCCCCAACTTTTCTCCTATGGC...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGCATTTCCATTTGCTTTaGCCAGGAACGAATGTAACT +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGHFHLL*PGTNVT
Trigger: AGTTACATTCGTTCCTGGCAAAAGCAAATGGAAATG...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCCATTTCCATTTGCTTTaGCCAGGAACGAATGTAACT +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVHFHLL*PGTNVT
Trigger: AGTTACATTCGTTCCTGGCAAAAGCAAATGGAAATG...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGACAGGGCATATCCTTaGGCTCTCAAATGGGAATCC +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIDRAYP*ALKWES
Trigger: GGATTCCCATTTGAGAGCCAAAGGATATGCCCTGTC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGGGGAAATCTGCAACTaGGACATTGGCACAAATAAG +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGGEICN*DIGTNK
Trigger: CTTATTTGTGCCAATGTCCAAGTTGCAGATTTCCCC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGAGCTTATCTTGTCTCTaGAGAATTCCACTGATTTGC +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGSLSCL*RIPLIC
Trigger: GCAAATCAGTGGAATTCTCAAGAGACAAGATAAGCT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAGCTTATCTTGTCTCTaGAGAATTCCACTGATTTGC +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSSLSCL*RIPLIC
Trigger: GCAAATCAGTGGAATTCTCAAGAGACAAGATAAGCT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 90 bp CTATACTGGCATCCAAATATGCCTCTTCTGCCAATGTCTGTTCAGTaGTATTGGCCTCTTGCAAGGATTTCTGAAGAATGTCGAAAGGTT +
Preference number: 5 (lower is better)
Translates to: LYWHPNMPLLPMSVQ*YWPLARISEECRKV
Trigger: AACCTTTCGACATTCTTCAGAAATCCTTGCAAGAGGCCAATATCACTGAACAGACATTGGCAGAAGAGGCATATTTGGATGCCAGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 90 bp AGATGTTTGAAAATTTGTGCTGTTAAATGGAACGGTAACAGGCTGTaGTACTGGACTGGAACTAGAGTTCCCAAACAAGGAGTTGCCATT +
Preference number: 5 (lower is better)
Translates to: RCLKICAVKWNGNRL*YWTGTRVPKQGVAI
Trigger: AATGGCAACTCCTTGTTTGGGAACTCTAGTTCCAGTCCAGTAGCACAGCCTGTTACCGTTCCATTTAACAGCACAAATTTTCAAACATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 90 bp GTGTGTAAAACTTCATTCTTTGGAGAATTCCTCAGACTTTTGTCCTaGAAGGAATTGTTACACGTCATCTCCAAGTGCGAATCTGCTAGG +
Preference number: 5 (lower is better)
Translates to: VCKTSFFGEFLRLLS*KELLHVISKCESAR
Trigger: CCTAGCAGATTCGCACTTGGAGATGACGTGTAACAATTCCTTCCAGGACAAAAGTCTGAGGAATTCTCCAAAGAATGAAGTTTTACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAAAAATAGTTCAATGCTaGTGGGTCTCCAATAAGATC +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSKIVQC*WVSNKI
Trigger: GATCTTATTGGAGACCCACAAGCATTGAACTATTTT...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCTGGCGAAAATTGAATTaGAATTGGCTGCAGAATATC +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVWRKLN*NWLQNI
Trigger: GATATTCTGCAGCCAATTCAAATTCAATTTTCGCCA...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp GCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCATGGCGAAAATTGAATTaGAATTGGCTGCAGAATATC +
Preference number: 5 (lower is better)
Translates to: AGYLWFVCVLVMNCCQGSWRKLN*NWLQNI
Trigger: GATATTCTGCAGCCAATTCAAATTCAATTTTCGCCA...TGACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGTGCAAACTGTTGGCTaGAACCTATACTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGVQTVG*NLYWHP
Trigger: TGGATGCCAGTATAGGTTCAAGCCAACAGTTTGCAC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGACTGTCTCAAATTCATaGTCCACTTTTCTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGTVSNS*STFLKS
Trigger: AGACTTGAGAAAAGTGGACAATGAATTTGAGACAGT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTATCTCAGCAGAGGGATaGATTCGCATGGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIISAEG*IRMASS
Trigger: AGAAGATGCCATGCGAATCAATCCCTCTGCTGAGAT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAATCTCAGCAGAGGGATaGATTCGCATGGCATCTTCT +
Preference number: 5 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGISAEG*IRMASS
Trigger: AGAAGATGCCATGCGAATCAATCCCTCTGCTGAGAT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTGCCGTCCCGCCTTTTaGAGTTCCAAGATGTTCTTA +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFICRPAF*SSKMFL
Trigger: TAAGAACATCTTGGAACTCAAAAAGGCGGGACGGCA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCGCCATAGGAGAAAAGTaGGGGAAATCTAACTCAACA +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGAIGEK*GKSNST
Trigger: TGTTGAGTTAGATTTCCCCAACTTTTCTCCTATGGC...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCATGAGGTTTTGCTCCGGAAGCATCAGAAAAGCACTTGAACCATCAATAGGGAACCCAAAACTAAATTaGCAGATGCAGTGGGATATT +
Preference number: 5 (lower is better)
Translates to: SMRFCSGSIRKALEPSIGNPKLN*QMQWDI
Trigger: AATATCCCACTGCATCTGCAAATTTAGTTTTGGGTT...CCCTATTGATGGTTCAAGTGCTTTTCTGATGCTTCCGGAGCAAAACCTCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AGCTGGTTACCTTTGGTTTGTCTGTGTTTTGGTAATGAATTGCTGCCAGGGGTCAACCCAAAACTAAATTaGCAGATGCAGTGGGATATT +
Preference number: 5 (lower is better)
Translates to: SWLPLVCLCFGNELLPGVNPKLN*QMQWDI
Trigger: AATATCCCACTGCATCTGCAAATTTAGTTTTGGGTT...GACCCCTGGCAGCAATTCATTACCAAAACACAGACAAACCAAAGGTAACCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGCCAGATTTTCCAATTaGTATTGGCTGGGGCATGTG +
Preference number: 5 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGARFSN*YWLGHV
Trigger: CACATGCCCCAGCCAATACAAATTGGAAAATCTGGC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAATAGAAAAGCTAGGATaGGGACAGCAGGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGIEKLG*GQQGRI
Trigger: TATCCTGCCCTGCTGTCCCAATCCTAGCTTTTCTAT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAGTTGTGAACGGCAGTaGGACGTAGGAATGAAATCC +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFISCERQ*DVGMKS
Trigger: GGATTTCATTCCTACGTCCAACTGCCGTTCACAACT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394168.1
CDS-3UTR CAA 90 bp GGGCAGGATAGGGAAGAAAGAGAGGTGACAAATGTACATGAAGCTTATCTTGTCAAAATAGTTCAATGCTaGTGGGTCTCCAATAAGATC +
Preference number: 5 (lower is better)
Translates to: GQDREEREVTNVHEAYLVKIVQC*WVSNKI
Trigger: GATCTTATTGGAGACCCACAAGCATTGAACTATTTT...GACAAGATAAGCTTCATGTACATTTGTCACCTCTCTTTCTTCCCTATCCTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGTCTGTTCAGTGATATaGGCCTCTTGCAAGGATTTC +
Preference number: 5 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGVCSVI*ASCKDF
Trigger: GAAATCCTTGCAAGAGGCCAATATCACTGAACAGAC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTTCCCAAACAAGGAGTaGCCATTAGGAGTCTGTCTA +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIFPNKE*PLGVCL
Trigger: TAGACAGACTCCTAATGGCAACTCCTTGTTTGGGAA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTTGGTCCTGAGCATGTaGGAAGAGTTTCTGTTCAAC +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFILVLSM*EEFLFN
Trigger: GTTGAACAGAAACTCTTCCAACATGCTCAGGACCAA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTACAGCAGTATTCTGGTaGTTAAGCATCGGTCCAGTA +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFITAVFW*LSIGPV
Trigger: TACTGGACCGATGCTTAACAACCAGAATACTGCTGT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAGGAGACCATTTCCATTaGCTTTTGCCAGGAACGAAT +
Preference number: 5 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGGDHFH*LLPGTN
Trigger: ATTCGTTCCTGGCAAAAGCAAATGGAAATGGTCTCC...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCAAAATAGTTCAATGCTaGTGGGTCTCCAATAAGATC +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGKIVQC*WVSNKI
Trigger: GATCTTATTGGAGACCCACAAGCATTGAACTATTTT...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATTGCATAAAGCCATGTaGTACACCCACTGTATTGCT +
Preference number: 5 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGLHKAM*YTHCIA
Trigger: AGCAATACAGTGGGTGTACAACATGGCTTTATGCAA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTGCCATAGGAGAAAAGTaGGGGAAATCTAACTCAACA +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIAIGEK*GKSNST
Trigger: TGTTGAGTTAGATTTCCCCAACTTTTCTCCTATGGC...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CTTAAAAACCCTTTAGGATGGTATATAGAAAAGCTAGGATTGGGACAGCAGGGCTACATGAAGCTTATCTaGTCTCTTGAGAATTCCACT +
Preference number: 5 (lower is better)
Translates to: LKNPLGWYIEKLGLGQQGYMKLI*SLENST
Trigger: AGTGGAATTCTCAAGAGACAAGATAAGCTTCATGTA...GCCCTGCTGTCCCAATCCTAGCTTTTCTATATACCATCCTAAAGGGTTTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTAGTGATATTGGCCTCTaGCAAGGATTTCTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFISDIGL*QGFLKN
Trigger: ATTCTTCAGAAATCCTTGCAAGAGGCCAATATCACT...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGATTGAGTTTGAAGAAGTaGCCCATTTATAGTCTGGAC +
Preference number: 5 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGLSLKK*PIYSLD
Trigger: GTCCAGACTATAAATGGGCAACTTCTTCAAACTCAA...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp AAATTAGGCTCTCCATTTGCTAGACAAGTGTTAGGGCTTAAAAACCCTTTAGGAAACCCAAAACTAAATTaGCAGATGCAGTGGGATATT +
Preference number: 5 (lower is better)
Translates to: KLGSPFARQVLGLKNPLGNPKLN*QMQWDI
Trigger: AATATCCCACTGCATCTGCAAATTTAGTTTTGGGTT...TCCTAAAGGGTTTTTAAGCCCTAACACTTGTCTAGCAAATGGAGAGCCTAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS-3UTR CAA 90 bp CCCATGTGCGTAGAACCTAATCACAGGAGTGAAATACATGTCATAATCTTCATTTACATGAAGCTTATCTaGTCTCTTGAGAATTCCACT +
Preference number: 5 (lower is better)
Translates to: PMCVEPNHRSEIHVIIFIYMKLI*SLENST
Trigger: AGTGGAATTCTCAAGAGACAAGATAAGCTTCATGTA...AATGAAGATTATGACATGTATTTCACTCCTGTGATTAGGTTCTACGCACATGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 72 bp GAGGTTTTCCGGTGCCCCTCAGGGCCGGGAGAGCACTaGCTGGCCTTCAGAGGCTCTCTCCGGCTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: EVFRCPSGPGEH*LAFRGSLRLAF
Trigger: GAAGGCCAGCCGGAGAGAGCCTCTGAAGGCCAGTCAGTGCTCTCCCGGCCCTGAGGGGCACCGGAAAACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp GGCCTTCATGCTCTGCGCCCGGGCAAACCGCTCGCCTaGTCGTCTACCTCCAAACTTCGGTTCTCGCCCCAG +
Preference number: 6 (lower is better)
Translates to: GLHALRPGKPLA*SSTSKLRFSPQ
Trigger: CTGGGGCGAGAACCGAAGTTTGGAGGTAGACGAGCAGGCGAGCGGTTTGCCCGGGCGCAGAGCATGAAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614467.4
CDS CCA 72 bp TTTTCCGGTGCCCCTCAGGGCCGGGAGAGCACTGACTaGCCTTCAGAGGCTCTCTCCGGCTGGCCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: FSGAPQGRESTD*PSEALSGWPSL
Trigger: AAGAGAAGGCCAGCCGGAGAGAGCCTCTGAAGGCCAGTCAGTGCTCTCCCGGCCCTGAGGGGCACCGGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 72 bp GGGTTCCGTCACACCGGTTTTGGCTCGGTCTCTGCCTaGGGCCTTGGCTGGCGGTTGCAGAGAGCTGCTTGC +
Preference number: 6 (lower is better)
Translates to: GFRHTGFGSVSA*GLGWRLQRAAC
Trigger: GCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 90 bp CACACCGGTTTTGGCTCGGTCTCTGCCTTGGGCCTTGGCTGGCGGTaGCAGAGAGCTGCTTGCTTTACTGCCATGCTGGTCACTCCGGCC +
Preference number: 6 (lower is better)
Translates to: HTGFGSVSALGLGWR*QRAACFTAMLVTPA
Trigger: GGCCGGAGTGACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp CCCTGGCAGTGTGGTGCTCAAGAGCCCAGGGATCTGTaGTTGCCTCAGGCCGTCTGTGGTCTTGGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: PWQCGAQEPRDL*LPQAVCGLGSR
Trigger: TCTGCTCCCAAGACCACAGACGGCCTGAGGCAAGCACAGATCCCTGGGCTCTTGAGCACCACACTGCCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp TCATGGGTTCCGTCACACCGGTTTTGGCTCGGTCTCTaGCTTGGGCCTTGGCTGGCGGTTGCAGAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: SWVPSHRFWLGL*LGPWLAVAESC
Trigger: GCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGAACCCATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 72 bp GGTTCCGTCACACCGGTTTTGGCTCGGTCTCTGCCTTaGGCCTTGGCTGGCGGTTGCAGAGAGCTGCTTGCT +
Preference number: 6 (lower is better)
Translates to: GSVTPVLARSLP*ALAGGCRELLA
Trigger: AGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 90 bp ATCCTGCCCTGGCAGTGTGGTGCTCAAGAGCCCAGGGATCTGTGCTaGCCTCAGGCCGTCTGTGGTCTTGGGAGCAGAAATGGGGGAAGT +
Preference number: 6 (lower is better)
Translates to: ILPWQCGAQEPRDLC*PQAVCGLGSRNGGS
Trigger: ACTTCCCCCATTTCTGCTCCCAAGACCACAGACGGCCTGAGGCAAGCACAGATCCCTGGGCTCTTGAGCACCACACTGCCAGGGCAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 90 bp ATGGGTTCCGTCACACCGGTTTTGGCTCGGTCTCTGCCTTGGGCCTaGGCTGGCGGTTGCAGAGAGCTGCTTGCTTTACTGCCATGCTGG +
Preference number: 6 (lower is better)
Translates to: MGSVTPVLARSLPWA*AGGCRELLALLPCW
Trigger: CCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGAACCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp GGCAGTGTGGTGCTCAAGAGCCCAGGGATCTGTGCTTaGCTCAGGCCGTCTGTGGTCTTGGGAGCAGAAATG +
Preference number: 6 (lower is better)
Translates to: GSVVLKSPGICA*LRPSVVLGAEM
Trigger: CATTTCTGCTCCCAAGACCACAGACGGCCTGAGGCAAGCACAGATCCCTGGGCTCTTGAGCACCACACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp TTGGCTCGGTCTCTGCCTTGGGCCTTGGCTGGCGGTTaGAGAGAGCTGCTTGCTTTACTGCCATGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: LARSLPWALAGG*RELLALLPCWS
Trigger: TGACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 72 bp ACCGGTTTTGGCTCGGTCTCTGCCTTGGGCCTTGGCTaGCGGTTGCAGAGAGCTGCTTGCTTTACTGCCATG +
Preference number: 6 (lower is better)
Translates to: TGFGSVSALGLG*RLQRAACFTAM
Trigger: CATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 72 bp TCACACCGGTTTTGGCTCGGTCTCTGCCTTGGGCCTTaGCTGGCGGTTGCAGAGAGCTGCTTGCTTTACTGC +
Preference number: 6 (lower is better)
Translates to: SHRFWLGLCLGP*LAVAESCLLYC
Trigger: GCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 72 bp TGCCTTGGGCCTTGGCTGGCGGTTGCAGAGAGCTGCTaGCTTTACTGCCATGCTGGTCACTCCGGCCAAACT +
Preference number: 6 (lower is better)
Translates to: CLGPWLAVAESC*LYCHAGHSGQT
Trigger: AGTTTGGCCGGAGTGACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 72 bp TTTGGCTCGGTCTCTGCCTTGGGCCTTGGCTGGCGGTaGCAGAGAGCTGCTTGCTTTACTGCCATGCTGGTC +
Preference number: 6 (lower is better)
Translates to: FGSVSALGLGWR*QRAACFTAMLV
Trigger: GACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 72 bp GTCACACCGGTTTTGGCTCGGTCTCTGCCTTGGGCCTaGGCTGGCGGTTGCAGAGAGCTGCTTGCTTTACTG +
Preference number: 6 (lower is better)
Translates to: VTPVLARSLPWA*AGGCRELLALL
Trigger: CAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 90 bp CTCGGTCTCTGCCTTGGGCCTTGGCTGGCGGTTGCAGAGAGCTGCTaGCTTTACTGCCATGCTGGTCACTCCGGCCAAACTGTGTCTCAT +
Preference number: 6 (lower is better)
Translates to: LGLCLGPWLAVAESC*LYCHAGHSGQTVSH
Trigger: ATGAGACACAGTTTGGCCGGAGTGACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 90 bp ATGATTCATGGGTTCCGTCACACCGGTTTTGGCTCGGTCTCTGCCTaGGGCCTTGGCTGGCGGTTGCAGAGAGCTGCTTGCTTTACTGCC +
Preference number: 6 (lower is better)
Translates to: MIHGFRHTGFGSVSA*GLGWRLQRAACFTA
Trigger: GGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGAACCCATGAATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp GTGGCGAAGCCAGGTCTTCCTTGGGAAACGCTGCTCTaGCCAGGTGACAGGTGTAATACAGTTGGGGATGCC +
Preference number: 6 (lower is better)
Translates to: VAKPGLPWETLL*PGDRCNTVGDA
Trigger: GGCATCCCCAACTGTATTACACCTGTCACCTGGGCAGAGCAGCGTTTCCCAAGGAAGACCTGGCTTCGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp GCATGGTGGCGAAGCCAGGTCTTCCTTGGGAAACGCTaGTCTGCCCAGGTGACAGGTGTAATACAGTTGGGG +
Preference number: 6 (lower is better)
Translates to: AWWRSQVFLGKR*SAQVTGVIQLG
Trigger: CCCCAACTGTATTACACCTGTCACCTGGGCAGAGCAGCGTTTCCCAAGGAAGACCTGGCTTCGCCACCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 72 bp ACTGGTCATGATTCATGGGTTCCGTCACACCGGTTTTaGCTCGGTCTCTGCCTTGGGCCTTGGCTGGCGGTT +
Preference number: 6 (lower is better)
Translates to: TGHDSWVPSHRF*LGLCLGPWLAV
Trigger: AACCGCCAGCCAAGGCCCAAGGCAGAGACCGAGCCAAAACCGGTGTGACGGAACCCATGAATCATGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 72 bp TGGCAGTGTGGTGCTCAAGAGCCCAGGGATCTGTGCTaGCCTCAGGCCGTCTGTGGTCTTGGGAGCAGAAAT +
Preference number: 6 (lower is better)
Translates to: WQCGAQEPRDLC*PQAVCGLGSRN
Trigger: ATTTCTGCTCCCAAGACCACAGACGGCCTGAGGCAAGCACAGATCCCTGGGCTCTTGAGCACCACACTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 90 bp TTCCTTGGGAAACGCTGCTCTGCCCAGGTGACAGGTGTAATACAGTaGGGGATGCCTGCTGCAAGGGCATCTGTCCACCCACAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: FLGKRCSAQVTGVIQ*GMPAARASVHPQAE
Trigger: CTCAGCTTGTGGGTGGACAGATGCCCTTGCAGCAGGCATCCCCAACTGTATTACACCTGTCACCTGGGCAGAGCAGCGTTTCCCAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp CCTTGGCTGGCGGTTGCAGAGAGCTGCTTGCTTTACTaGCATGCTGGTCACTCCGGCCAAACTGTGTCTCAT +
Preference number: 6 (lower is better)
Translates to: PWLAVAESCLLY*HAGHSGQTVSH
Trigger: ATGAGACACAGTTTGGCCGGAGTGACCAGCATGGCAGTAAAGCAAGCAGCTCTCTGCAACCGCCAGCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 72 bp AGAGCCCAGGGATCTGTGCTTGCCTCAGGCCGTCTGTaGTCTTGGGAGCAGAAATGGGGGAAGTCTGATTCA +
Preference number: 6 (lower is better)
Translates to: RAQGSVLASGRL*SWEQKWGKSDS
Trigger: TGAATCAGACTTCCCCCATTTCTGCTCCCAAGACCACAGACGGCCTGAGGCAAGCACAGATCCCTGGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 72 bp TGCTTGACAGTTTGCTCTCAGTACCATGATCCGATCTaGATGAGGTTTTCCGGTGCCCCTCAGGGCCGGGAG +
Preference number: 6 (lower is better)
Translates to: CLTVCSQYHDPI*MRFSGAPQGRE
Trigger: CTCCCGGCCCTGAGGGGCACCGGAAAACCTCATCCAGATCGGATCATGGTACTGAGAGCAAACTGTCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 72 bp TCTAACTCAACAGAGCCGCTAACCGTGGGGTCACTCTaGGGCTGCCGTCCCGCCTTTTTGAGTTCCAAGATG +
Preference number: 6 (lower is better)
Translates to: SNSTEPLTVGSL*GCRPAFLSSKM
Trigger: CATCTTGGAACTCAAAAAGGCGGGACGGCAGCCCCAGAGTGACCCCACGGTTAGCGGCTCTGTTGAGTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 72 bp AAACGCTGCTCTGCCCAGGTGACAGGTGTAATACAGTaGGGGATGCCTGCTGCAAGGGCATCTGTCCACCCA +
Preference number: 6 (lower is better)
Translates to: KRCSAQVTGVIQ*GMPAARASVHP
Trigger: TGGGTGGACAGATGCCCTTGCAGCAGGCATCCCCAACTGTATTACACCTGTCACCTGGGCAGAGCAGCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 72 bp ACCCACAAGCTGAGGAGAGGCATGATTGGCTATCACTaGACTTCCAGAGGCAGCAAATGTCTGCCCAGACAC +
Preference number: 6 (lower is better)
Translates to: THKLRRGMIGYH*TSRGSKCLPRH
Trigger: GTGTCTGGGCAGACATTTGCTGCCTCTGGAAGTCCAGTGATAGCCAATCATGCCTCTCCTCAGCTTGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 72 bp CAGGGATCTGTGCTTGCCTCAGGCCGTCTGTGGTCTTaGGAGCAGAAATGGGGGAAGTCTGATTCAGACATT +
Preference number: 6 (lower is better)
Translates to: QGSVLASGRLWS*EQKWGKSDSDI
Trigger: AATGTCTGAATCAGACTTCCCCCATTTCTGCTCCCAAGACCACAGACGGCCTGAGGCAAGCACAGATCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 72 bp ATGACTCTCCACCTGCACAGCTGGATGGCCAGGAGATaGTCCAACTACTTTTTCCTGCTGTGGTTGTGCGGT +
Preference number: 6 (lower is better)
Translates to: MTLHLHSWMARR*SNYFFLLWLCG
Trigger: ACCGCACAACCACAGCAGGAAAAAGTAGTTGGATCATCTCCTGGCCATCCAGCTGTGCAGGTGGAGAGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 72 bp GCTTGTCTCGGGACAGGGAAGCTCTTTCCTCCTGGTTaGACATCCTATCGATCATCACCATCTCAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: ACLGTGKLFPPG*TSYRSSPSQQR
Trigger: CCTCTGCTGAGATGGTGATGATCGATAGGATGTTCAACCAGGAGGAAAGAGCTTCCCTGTCCCGAGACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp GCCATGTTGTACACCCACTGTATTGCTTGCAAACGATaGTCCAACAGGCACATGCGTCACCCCTATAGGCTG +
Preference number: 6 (lower is better)
Translates to: AMLYTHCIACKR*SNRHMRHPYRL
Trigger: CAGCCTATAGGGGTGACGCATGTGCCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTACAACATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp TCAGAGGCTCTCTCCGGCTGGCCTTCTCTTCAGACGTaGTCTGGTACTGCACTAAGCCCACTTTGTCAAATT +
Preference number: 6 (lower is better)
Translates to: SEALSGWPSLQT*SGTALSPLCQI
Trigger: AATTTGACAAAGTGGGCTTAGTGCAGTACCAGAGCACGTCTGAAGAGAAGGCCAGCCGGAGAGAGCCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 72 bp GGCTCTCTCCGGCTGGCCTTCTCTTCAGACGTGCTCTaGTACTGCACTAAGCCCACTTTGTCAAATTTCAGT +
Preference number: 6 (lower is better)
Translates to: GSLRLAFSSDVL*YCTKPTLSNFS
Trigger: ACTGAAATTTGACAAAGTGGGCTTAGTGCAGTACCAGAGCACGTCTGAAGAGAAGGCCAGCCGGAGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 72 bp GTGGTTTCCAAGCTCTTTGTCAGCTGGAGATCTGGCTaGGGTTCGCCTGACCCTTTCATGATGTCTGTGTGT +
Preference number: 6 (lower is better)
Translates to: VVSKLFVSWRSG*GSPDPFMMSVC
Trigger: ACACACAGACATCATGAAAGGGTCAGGCGAACCCCAGCCAGATCTCCAGCTGACAAAGAGCTTGGAAACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 72 bp TCGGAAGTGACTTTTGTCTGGTGTCACAGTGTGGGCTaGGTCCCTCTGCAACTGCTGGAGAATGAAAGCTCC +
Preference number: 6 (lower is better)
Translates to: SEVTFVWCHSVG*VPLQLLENESS
Trigger: GGAGCTTTCATTCTCCAGCAGTTGCAGAGGGACCAAGCCCACACTGTGACACCAGACAAAAGTCACTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 90 bp TGTTCACAGACATGTGTGGACCAACTACTGAGCCCTGGGGTGAGCTaGCAGAAGCAAAAGAGATCCCTTGTTGTACGTGGTGCTGCTGAA +
Preference number: 6 (lower is better)
Translates to: CSQTCVDQLLSPGVS*QKQKRSLVVRGAAE
Trigger: TTCAGCAGCACCACGTACAACAAGGGATCTCTTTTGCTTCTGCAAGCTCACCCCAGGGCTCAGTAGTTGGTCCACACATGTCTGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 72 bp TCTGCTAGGATGCTTGACAGTTTGCTCTCAGTACCATaGTCCGATCTGGATGAGGTTTTCCGGTGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: SARMLDSLLSVP*SDLDEVFRCPS
Trigger: TGAGGGGCACCGGAAAACCTCATCCAGATCGGATCATGGTACTGAGAGCAAACTGTCAAGCATCCTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp TCTGGTGTCACAGTGTGGGCTTGGTCCCTCTGCAACTaGTGGAGAATGAAAGCTCCTTTCGTTAGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: SGVTVWAWSLCN*WRMKAPFVSCF
Trigger: GAAACAGCTAACGAAAGGAGCTTTCATTCTCCAGCAGTTGCAGAGGGACCAAGCCCACACTGTGACACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp CTTTTGTCTGGTGTCACAGTGTGGGCTTGGTCCCTCTaGAACTGCTGGAGAATGAAAGCTCCTTTCGTTAGC +
Preference number: 6 (lower is better)
Translates to: LLSGVTVWAWSL*NCWRMKAPFVS
Trigger: GCTAACGAAAGGAGCTTTCATTCTCCAGCAGTTGCAGAGGGACCAAGCCCACACTGTGACACCAGACAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CCA 72 bp AGAAACTGGAAGACGATGAGACACACTGACTGGTACTaGAGTCCTGTTTGGCTGGGTCAGCTGATCTCCTGT +
Preference number: 6 (lower is better)
Translates to: RNWKTMRHTDWY*SPVWLGQLISC
Trigger: ACAGGAGATCAGCTGACCCAGCCAAACAGGACTCCAGTACCAGTCAGTGTGTCTCATCGTCTTCCAGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 72 bp TGTAGGTATAAGGAACTGACTTTGGGGTGCGTGAGGTaGGCCCATGGGGGAATGAATAACAATACTGCCCCC +
Preference number: 6 (lower is better)
Translates to: CRYKELTLGCVR*AHGGMNNNTAP
Trigger: GGGGGCAGTATTGTTATTCATTCCCCCATGGGCCAACCTCACGCACCCCAAAGTCAGTTCCTTATACCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 90 bp ATGCTGGCTGGGAACACTGATCCCCACATGTTGCATAAAGCCATGTaGTACACCCACTGTATTGCTTGCAAACGATGCTCCAACAGGCAC +
Preference number: 6 (lower is better)
Translates to: MLAGNTDPHMLHKAM*YTHCIACKRCSNRH
Trigger: GTGCCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTACAACATGGCTTTATGCAACATGTGGGGATCAGTGTTCCCAGCCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 90 bp GGCCACTTGGCCAGAAATGAGCTGAGAGGGTTGAGTTTGAAGAAGTaGCCCATTTATAGTCTGGACGTGGTGTACCGAGTTGGAACTGAC +
Preference number: 6 (lower is better)
Translates to: GHLARNELRGLSLKK*PIYSLDVVYRVGTD
Trigger: GTCAGTTCCAACTCGGTACACCACGTCCAGACTATAAATGGGCAACTTCTTCAAACTCAACCCTCTCAGCTCATTTCTGGCCAAGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 90 bp AGTGCCAAACGCTTGTCTCGGGACAGGGAAGCTCTTTCCTCCTGGTaGAACATCCTATCGATCATCACCATCTCAGCAGAGGGATTGATT +
Preference number: 6 (lower is better)
Translates to: SAKRLSRDREALSSW*NILSIITISAEGLI
Trigger: AATCAATCCCTCTGCTGAGATGGTGATGATCGATAGGATGTTCAACCAGGAGGAAAGAGCTTCCCTGTCCCGAGACAAGCGTTTGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 72 bp TTCCCAAACAAGGAGTTGCCATTAGGAGTCTGTCTATaGACCAGGAGCCCTCCACTCACATTTGATGGGGCT +
Preference number: 6 (lower is better)
Translates to: FPNKELPLGVCL*TRSPPLTFDGA
Trigger: AGCCCCATCAAATGTGAGTGGAGGGCTCCTGGTTCATAGACAGACTCCTAATGGCAACTCCTTGTTTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 72 bp CTGACTGGTACTGGAGTCCTGTTTGGCTGGGTCAGCTaGTCTCCTGTAAAGTTTGATCCTGATGAACCAGAC +
Preference number: 6 (lower is better)
Translates to: LTGTGVLFGWVS*SPVKFDPDEPD
Trigger: GTCTGGTTCATCAGGATCAAACTTTACAGGAGATCAGCTGACCCAGCCAAACAGGACTCCAGTACCAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS TCA 72 bp ACTTGGAAGAAGAAACTGGAAGACGATGAGACACACTaGCTGGTACTGGAGTCCTGTTTGGCTGGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: TWKKKLEDDETH*LVLESCLAGSA
Trigger: AGCTGACCCAGCCAAACAGGACTCCAGTACCAGTCAGTGTGTCTCATCGTCTTCCAGTTTCTTCTTCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp TTGGCTATCACTGGACTTCCAGAGGCAGCAAATGTCTaGCCAGACACTAAGTGGACAGCAGTATTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: LAITGLPEAANV*PDTKWTAVFWL
Trigger: CAACCAGAATACTGCTGTCCACTTAGTGTCTGGGCAGACATTTGCTGCCTCTGGAAGTCCAGTGATAGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS GCA 72 bp GCTGGATGGCCAGGAGATGATCCAACTACTTTTTCCTaGTGTGGTTGTGCGGTTCCTAAGGATGCGGATATA +
Preference number: 6 (lower is better)
Translates to: AGWPGDDPTTFS*CGCAVPKDADI
Trigger: TATATCCGCATCCTTAGGAACCGCACAACCACAGCAGGAAAAAGTAGTTGGATCATCTCCTGGCCATCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 72 bp ACTGACAGAAAGGCTTGTAGGTATAAGGAACTGACTTaGGGGTGCGTGAGGTTGGCCCATGGGGGAATGAAT +
Preference number: 6 (lower is better)
Translates to: TDRKACRYKELT*GCVRLAHGGMN
Trigger: ATTCATTCCCCCATGGGCCAACCTCACGCACCCCAAAGTCAGTTCCTTATACCTACAAGCCTTTCTGTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314073.9
ENST00000394168.1
ENST00000614467.4
CDS CAA 90 bp CTGATCCCCACATGTTGCATAAAGCCATGTTGTACACCCACTGTATaGCTTGCAAACGATGCTCCAACAGGCACATGCGTCACCCCTATA +
Preference number: 6 (lower is better)
Translates to: LIPTCCIKPCCTPTV*LANDAPTGTCVTPI
Trigger: TATAGGGGTGACGCATGTGCCTGTTGGAGCATCGTTTGCAAGCAATACAGTGGGTGTACAACATGGCTTTATGCAACATGTGGGGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer