RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BICDL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000162069

Ensembl transcript IDs: ENST00000389347.4, ENST00000572240.5, ENST00000572449.6, ENST00000573514.5, ENST00000576826.1, ENST00000642419.1

Found 454 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTaGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGCCC +
Preference number: 1 (lower is better)
Translates to: GISFFWKTIWALSLH*PEEESEPLSGQGQP
Trigger: GGGCTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR TCA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTAGGCCCCTGCTCCGGATaGGCCCCTGCTCCCGATGAG +
Preference number: 2 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLGPCSG*APAPDE
Trigger: CTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCC...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR CCA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACACCTTGCCCAGCATCCTaGGGCGGGGAGGGCATCAGC +
Preference number: 2 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTPCPAS*GGEGIS
Trigger: GCTGATGCCCTCCCCGCCCCAGGATGCTGGGCAAGG...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR TCA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACAAGCCCCTGCTCCCGATaGGCCCTTGCCCAGCATCCT +
Preference number: 2 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTSPCSR*ALAQHP
Trigger: AGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCT...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR TCA 90 bp GGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCAGGCCCCTGCTCCGGATaGGCCCCTGCTCCCGATGAG +
Preference number: 2 (lower is better)
Translates to: GVIYILLCPILIHKYPAPGPCSG*APAPDE
Trigger: CTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCC...TGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR CCA 90 bp TGCCCTAGAAAAGATAGACGTATATTAATTCGGAAAATAGCTCTGTTCACCTGCCCTTGCCCAGCATCCTaGGGCGGGGAGGGCATCAGC +
Preference number: 2 (lower is better)
Translates to: CPRKDRRILIRKIALFTCPCPAS*GGEGIS
Trigger: GCTGATGCCCTCCCCGCCCCAGGATGCTGGGCAAGG...GCAGGTGAACAGAGCTATTTTCCGAATTAATATACGTCTATCTTTTCTAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR CCA 90 bp TACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATCCCCTGCCACCCACCTaGAGCTCCTGCCCCACAAAG +
Preference number: 2 (lower is better)
Translates to: YHALSFYEWGPNRWSDLYPLPPT*SSCPTK
Trigger: CTTTGTGGGGCAGGAGCTCCAGGTGGGTGGCAGGGG...ATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR GCA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGCCCACCTGGAGCTCCTaGCCCACAAAGCTGGCCCCT +
Preference number: 2 (lower is better)
Translates to: IYILLCPILIHKYPAPSLPTWSS*PTKLAP
Trigger: AGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGG...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR TCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAAGCCCCTGCTCCCGATaGGCCCTTGCCCAGCATCCT +
Preference number: 2 (lower is better)
Translates to: IGGVIYILLCPILIHKYPSPCSR*ALAQHP
Trigger: AGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCT...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR GCA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTAACCCAGCCCCATCCCTaGCCTAGAAAAGATAGACGT +
Preference number: 2 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLTQPHP*PRKDRR
Trigger: ACGTCTATCTTTTCTAGGGCAGGGATGGGGCTGGGT...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR CCA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGTTTTGGAAGACAATCTaGGCCCTGTCGCTCCATTGG +
Preference number: 2 (lower is better)
Translates to: IYILLCPILIHKYPAPSLFWKTI*ALSLHW
Trigger: CCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAA...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR TCA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATACTCTGTCCGATCTTaGTACATAAATACCCAGCCC +
Preference number: 2 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLYSVRS*YINTQP
Trigger: GGGCTGGGTATTTATGTATCAAGATCGGACAGAGTA...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR CCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTTTTTGGAAGACAATCTaGGCCCTGTCGCTCCATTGG +
Preference number: 2 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCFWKTI*ALSLHW
Trigger: CCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAA...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR CAA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCGCTCCCGATGAGCCCTaGCCCAGCATCCTGGGGCGG +
Preference number: 3 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPAPDEP*PSILGR
Trigger: CCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGC...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR CAA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGCATCAGCTTCTTTaGGAAGACAATCTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGGHQLL*EDNLGP
Trigger: AGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCC...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR CCA 72 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTaGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGT +
Preference number: 3 (lower is better)
Translates to: GGEGISFFWKTI*ALSLHWPEEES
Trigger: ACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR CCA 72 bp TTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTaGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAA +
Preference number: 3 (lower is better)
Translates to: FFWKTIWALSLH*PEEESEPLSGQ
Trigger: TTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR CAA 90 bp TGCCCTAGAAAAGATAGACGTATATTAATTCGGAAAATAGCTCTGTTCACCTGCGCTCCCGATGAGCCCTaGCCCAGCATCCTGGGGCGG +
Preference number: 3 (lower is better)
Translates to: CPRKDRRILIRKIALFTCAPDEP*PSILGR
Trigger: CCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGC...GCAGGTGAACAGAGCTATTTTCCGAATTAATATACGTCTATCTTTTCTAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR-3UTR CAA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGGGCATCAGCTTCTTTaGGAAGACAATCTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: IGGVIYILLCPILIHKYPGHQLL*EDNLGP
Trigger: AGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCC...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
3UTR CCA 72 bp CATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTaGAGTGATTTATATATTACTCTGTCCGATCTTGAT +
Preference number: 3 (lower is better)
Translates to: HALSFYEWGPNR*SDLYITLSDLD
Trigger: ATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCTCGGCGCCCTGGCCCTaGTCGCCGTCGTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPSAPWP*SPSSRL
Trigger: CAGCCTCGACGACGGCGACCAGGGCCAGGGCGCCGA...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCGCCCCCTCCCAGGAATaGGTCCCGCCGCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASAPSQE*VPPLQH
Trigger: GTGCTGGAGCGGCGGGACTCATTCCTGGGAGGGGGC...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR TCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCCGCCTCCCCAGCCTCTaGCCGTGCGCGTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASRLPSL*PCAFQL
Trigger: GAGCTGGAACGCGCACGGTCAGAGGCTGGGGAGGCG...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCGGCCCCTGCTCCGGATaGGCCCCTGCTCCCGATGAG +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASGPCSG*APAPDE
Trigger: CTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCC...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTCGGAGACGCGCCGCTaGAGCCTCCGCAGCGCACTC +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASSETRR*SLRSAL
Trigger: GAGTGCGCTGCGGAGGCTGCAGCGGCGCGTCTCCGA...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCTCGGAGACGCGCCGCTaGAGCCTCCGCAGCGCACTC +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGSETRR*SLRSAL
Trigger: GAGTGCGCTGCGGAGGCTGCAGCGGCGCGTCTCCGA...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCCGCAGGCCTCGGATCTaGGCCTCCAGGTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPRRPRI*ASRSCR
Trigger: CCGGCAGGACCTGGAGGCCCAGATCCGAGGCCTGCG...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGCCACCTTCTGGCGGATaGCGCGCAGCAGCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: APDEPLLPMSPCPASWGGPPSGG*RAAAPE
Trigger: CTCGGGAGCTGCTGCGCGCCATCCGCCAGAAGGTGG...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGCCTTGCCCAGCATCCTaGGGCGGGGAGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: APDEPLLPMSPCPASWGGPCPAS*GGEGIS
Trigger: GCTGATGCCCTCCCCGCCCCAGGATGCTGGGCAAGG...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCGCTCCAGCCAGTGCCTaGGCCTGGCACTGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPAPASA*AWHCPR
Trigger: TCGGGGACAGTGCCAGGCTCAGGCACTGGCTGGAGC...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCCTCGCTGAGGGCCCGTaGCCGTTCTCGCCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGLAEGP*PFSPTV
Trigger: GACAGTGGGCGAGAACGGGCACGGGCCCTCAGCGAG...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGGAGACGCGGTTGAGCTaGAGGGACAGCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: APDEPLLPMSPCPASWGGETRLS*RDSSRA
Trigger: GGCCCTGGAGCTGTCCCTGCAGCTCAACCGCGTCTC...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGTGAGCGCCACCTTCTaGCGGATGGCGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGVSATF*RMARSS
Trigger: GCTGCTGCGCGCCATCCGCCAGAAGGTGGCGCTCAC...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGGCGCTCAGCTCCTTCTaGCGCTGTGAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: APDEPLLPMSPCPASWGGALSSF*RCERSC
Trigger: GCAGCTGCGCTCACAGCGCCAGAAGGAGCTGAGCGC...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGCAAGGGCAGCCCTCTaGGCCCAGCCGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGARAAL*AQPSGP
Trigger: AGGACCTGACGGCTGGGCCCAGAGGGCTGCCCTTGC...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCCCTTGCCCAGCATCCTaGGGCGGGGAGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASPCPAS*GGEGIS
Trigger: GCTGATGCCCTCCCCGCCCCAGGATGCTGGGCAAGG...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCCCAGCGAGACGCGGTTaGGCTGCAGGGACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPPARRG*AAGTAP
Trigger: TGGAGCTGTCCCTGCAGCTCAACCGCGTCTCGCTGG...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCGTCACCTGCAGCATCTaGGGGGACAGGTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPVTCSI*GDRWLR
Trigger: CCGCAGCCACCTGTCCCCGCAGATGCTGCAGGTGAC...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389347.4
CDS-3UTR GCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCCGCCCACTGTCCTGCTaGTCTGAGCGCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPRPLSC*SERCSP
Trigger: TGGGGAGCAGCGCTCAGAGCAGCAGGACAGTGGGCG...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCCCGCGTCCTCAGCTCTaGTCCAGCCAGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPPRPQL*SSQCLS
Trigger: GCTCAGGCACTGGCTGGAGCAGAGCTGAGGACGCGG...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGTCCTGCCGGCGGCTCTaGAGCATCTGGTTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: APDEPLLPMSPCPASWGGSCRRL*SIWFSP
Trigger: GGGGGAAAACCAGATGCTGCAGAGCCGCCGGCAGGA...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCCAGGCCTCCAGCTCCTaGGTGAGCGCCACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPQASSS*VSATFW
Trigger: CCAGAAGGTGGCGCTCACGCAGGAGCTGGAGGCCTG...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCCGCTGTGAGCGCAGCTaGTGCCCGATCACCACCTGC +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPRCERS*CPITTC
Trigger: GCAGGTGGTGATCGGGCAGCAGCTGCGCTCACAGCG...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCCCCACCTGGAGCTCCTaGCCCACAAAGCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASPTWSS*PTKLAP
Trigger: AGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGG...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCCCCACCTGGAGCTCCTaGCCCACAAAGCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGPTWSS*PTKLAP
Trigger: AGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGG...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGAGCTCATGGTTCTCCTaGTGGAGCCGCTGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: APDEPLLPMSPCPASWGGSSWFS*WSRCGG
Trigger: GCCCCCACAGCGGCTCCAGCAGGAGAACCATGAGCT...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCGACACGTCGGCGTCCTaGAGGCGTGACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPDTSAS*RRDSSS
Trigger: GGAGGAGGAGTCACGCCTCCAGGACGCCGACGTGTC...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCGACACGTCGGCGTCCTaGAGGCGTGACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASDTSAS*RRDSSS
Trigger: GGAGGAGGAGTCACGCCTCCAGGACGCCGACGTGTC...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCCCCCTGCCACCCACCTaGAGCTCCTGCCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASPLPPT*SSCPTK
Trigger: CTTTGTGGGGCAGGAGCTCCAGGTGGGTGGCAGGGG...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCAGCGGGGGAATGCCCTaGCACACCCAGATGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASSGGMP*HTQMPS
Trigger: GCTGGGCATCTGGGTGTGCCAGGGCATTCCCCCGCT...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTCCTGCCGGCGGCTCTaGAGCATCTGGTTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASSCRRL*SIWFSP
Trigger: GGGGGAAAACCAGATGCTGCAGAGCCGCCGGCAGGA...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGAGCTCCTTCTGCCTCTaGAGCTCTTCCCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: APDEPLLPMSPCPASWGGSSFCL*SSSRRD
Trigger: GTCCCTGCGGGAAGAGCTGCAGAGGCAGAAGGAGCT...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTCTGAGAGGGCACTGTaGAGGGCCTCCCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASSERAL*RASPGS
Trigger: AGACCCTGGGGAGGCCCTGCACAGTGCCCTCTCAGA...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCTGCCCGATCACCACCTaGATGTCGTCCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGCPITT*MSSCQA
Trigger: GGCCTGGCAGGACGACATGCAGGTGGTGATCGGGCA...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCCTGTTCACCTGCCCCTaGCACCCACCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGLFTCP*HPPGAP
Trigger: AGGAGCTCCAGGTGGGTGGCAGGGGCAGGTGAACAG...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTCAAGCCCCGGCCCATaGCAGCACACACCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASSSPGP*QHTPAV
Trigger: CACAGCAGGTGTGTGCTGCCATGGGCCGGGGCTTGA...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGCTCAGCGTCTCCAGCTaGCGCCGCAGCTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: APDEPLLPMSPCPASWGGLSVSS*RRSSSF
Trigger: AAATGAAGAGCTGCGGCGGCAGCTGGAGACGCTGAG...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCTCGGCTCCTCGGGCTaGCAGGCCTCGCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGLGSSG*QASPEL
Trigger: GAGCTCCGGCGAGGCCTGGCAGCCCGAGGAGCCGAG...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGCCAGTTCTGACTaGAACGAGGCAGCCGACACG +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASWASSD*NEAADT
Trigger: CGTGTCGGCTGCCTCGTTGCAGTCAGAACTGGCCCA...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCAGCTCCTTCTGCCTCTaGAGCTCTTCCCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGSSFCL*SSSRRD
Trigger: GTCCCTGCGGGAAGAGCTGCAGAGGCAGAAGGAGCT...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGTGAGCGCAGCTGCTaGCCGATCACCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASCERSC*PITTCM
Trigger: CATGCAGGTGGTGATCGGGCAGCAGCTGCGCTCACA...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCTGTGAGCGCAGCTGCTaGCCGATCACCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPCERSC*PITTCM
Trigger: CATGCAGGTGGTGATCGGGCAGCAGCTGCGCTCACA...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCAGAGGGTGGTTCGGCTaGCCTTCTTGGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGRGWFG*PSWRRG
Trigger: TCCCCTCCTCCAAGAAGGGCAGCCGAACCACCCTCT...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCCCGTCGTCGAGGCTGTaGGCCAGTTCTGACTGCAAC +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASPSSRL*ASSDCN
Trigger: GTTGCAGTCAGAACTGGCCCACAGCCTCGACGACGG...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGTGAAGGCTGGGGGCTaGACGCCTTTCGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGVKAGG*TPFGSL
Trigger: CAAAGACCCGAAAGGCGTCCAGCCCCCAGCCTTCAC...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCGTGAAGGCTGGGGGCTaGACGCCTTTCGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASVKAGG*TPFGSL
Trigger: CAAAGACCCGAAAGGCGTCCAGCCCCCAGCCTTCAC...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp CGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGGGAGAGGCGCCCCCTaGGAGCGGCCCGGACGGGAA +
Preference number: 4 (lower is better)
Translates to: RGGHQLLLEDNLGPVAPLGRGAP*ERPGRE
Trigger: TTCCCGTCCGGGCCGCTCTCAGGGGGCGCCTCTCCC...CAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR TCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCGCCGTTTTTGGCGCCTaGGTCTGGCAGAGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPAVFGA*VWQSSS
Trigger: GCTTGAACTCTGCCAGACTCAGGCGCCAAAAACGGC...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCAGAGCTCATGTCACCTaGAGCATCTGCGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGRAHVT*SICGDR
Trigger: CCTGTCCCCGCAGATGCTGCAGGTGACATGAGCTCT...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGCTCGGCTCCTCGGGCTaGCAGGCCTCGCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQLGSSG*QASPEL
Trigger: GAGCTCCGGCGAGGCCTGGCAGCCCGAGGAGCCGAG...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCCTCGGCTCCTCGGGCTaGCAGGCCTCGCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPLGSSG*QASPEL
Trigger: GAGCTCCGGCGAGGCCTGGCAGCCCGAGGAGCCGAG...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGTGCAGCTCTGCCTGCTaGAGCGAGATCTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: APDEPLLPMSPCPASWGGCSSAC*SEISSC
Trigger: GCAAGATGAGATCTCGCTGCAGCAGGCAGAGCTGCA...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGTATCTCCGCTGGACTaGGGGATGTTCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGVSPLD*GMFASW
Trigger: CCAAGAAGCGAACATCCCTCAGTCCAGCGGAGATAC...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCCTCCAGCTCCTGCGTaGGCGCCACCTTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGPPAPA*APPSGG
Trigger: TCCGCCAGAAGGTGGCGCTCACGCAGGAGCTGGAGG...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCCTCGGCTCCTCGGGCTaGCAGGCCTCGCCGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLALGSSG*QASPEL
Trigger: GAGCTCCGGCGAGGCCTGGCAGCCCGAGGAGCCGAG...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGTCGGAGACGCGCCGCTaGAGCCTCCGCAGCGCACTC +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQSETRR*SLRSAL
Trigger: GAGTGCGCTGCGGAGGCTGCAGCGGCGCGTCTCCGA...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCTGCAGCTCTGCCTGCTaGAGCGAGATCTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPCSSAC*SEISSC
Trigger: GCAAGATGAGATCTCGCTGCAGCAGGCAGAGCTGCA...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCGACTGCAGCTCTGCCTaGTGCAGCGAGATCTCATCT +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASDCSSA*CSEISS
Trigger: AGATGAGATCTCGCTGCAGCAGGCAGAGCTGCAGTC...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGACTGCAGCTCTGCCTaGTGCAGCGAGATCTCATCT +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGDCSSA*CSEISS
Trigger: AGATGAGATCTCGCTGCAGCAGGCAGAGCTGCAGTC...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCAGCCCTCGTCGCCGCTaGGAGAGGCGCCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPSPRRR*ERRPLR
Trigger: TCTCAGGGGGCGCCTCTCCCAGCGGCGACGAGGGCT...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR CCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATAGCCCTCGTCGCCGCTaGGAGAGGCGCCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHSPRRR*ERRPLR
Trigger: TCTCAGGGGGCGCCTCTCCCAGCGGCGACGAGGGCT...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR CCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTTCGGCGCCCTGGCCCTaGTCGCCGTCGTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSISAPWP*SPSSRL
Trigger: CAGCCTCGACGACGGCGACCAGGGCCAGGGCGCCGA...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGCCCTGTCGCTCCATTaGCCTGAAGAGGAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGALSLH*PEEESE
Trigger: CTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGGCTCCAGCCAGTGCCTaGGCCTGGCACTGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQAPASA*AWHCPR
Trigger: TCGGGGACAGTGCCAGGCTCAGGCACTGGCTGGAGC...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGGGCGTCCTGGAGGCGTaGCTCCTCCTCCAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQGVLEA*LLLQLG
Trigger: TCCGAGCTGGAGGAGGAGTCACGCCTCCAGGACGCC...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATGATCTCTTCCGGGGGTaGAGGCTGGGGGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHDLFRG*RLGAGR
Trigger: GCGTCCAGCCCCCAGCCTTCACCCCCGGAAGAGATC...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGGATCTCTTCCGGGGGTaGAGGCTGGGGGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQDLFRG*RLGAGR
Trigger: GCGTCCAGCCCCCAGCCTTCACCCCCGGAAGAGATC...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCCGCGTCCTCAGCTCTaGTCCAGCCAGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGPRPQL*SSQCLS
Trigger: GCTCAGGCACTGGCTGGAGCAGAGCTGAGGACGCGG...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCAGCGAGATCTCATCTTaGAGCTTGGCCACTTCCACC +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPSEISS*SLATST
Trigger: GGTGGAAGTGGCCAAGCTGCAAGATGAGATCTCGCT...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGCGCAGGCCTCGGATCTaGGCCTCCAGGTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RGGHQLLLEDNLGPVAPLRRPRI*ASRSCR
Trigger: CCGGCAGGACCTGGAGGCCCAGATCCGAGGCCTGCG...CAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATGTGAGCGCCACCTTCTaGCGGATGGCGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHVSATF*RMARSS
Trigger: GCTGCTGCGCGCCATCCGCCAGAAGGTGGCGCTCAC...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCCCCTGCCACCCACCTaGAGCTCCTGCCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGPLPPT*SSCPTK
Trigger: CTTTGTGGGGCAGGAGCTCCAGGTGGGTGGCAGGGG...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCAAAGCGGGATGGGCCTaGATGAAGGTGACAATTGCC +
Preference number: 4 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPKAGWA*MKVTIA
Trigger: GGCAATTGTCACCTTCATCCAGGCCCATCCCGCTTT...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR TCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCGCTCCAGCCAGTGCCTaGGCCTGGCACTGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLAAPASA*AWHCPR
Trigger: TCGGGGACAGTGCCAGGCTCAGGCACTGGCTGGAGC...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCGCCTCCCCAGCCTCTaGCCGTGCGCGTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLRLPSL*PCAFQL
Trigger: GAGCTGGAACGCGCACGGTCAGAGGCTGGGGAGGCG...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp CGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGGCGTCCTGGAGGCGTaGCTCCTCCTCCAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: RGGHQLLLEDNLGPVAPLGVLEA*LLLQLG
Trigger: TCCGAGCTGGAGGAGGAGTCACGCCTCCAGGACGCC...CAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGGCAGAGAGGCACCGATaGGACTGGGCAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGAERHR*DWAGTE
Trigger: CTCTGTGCCTGCCCAGTCTCATCGGTGCCTCTCTGC...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGCGCCCACTGTCCTGCTaGTCTGAGCGCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQRPLSC*SERCSP
Trigger: TGGGGAGCAGCGCTCAGAGCAGCAGGACAGTGGGCG...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATGAGACGCGGTTGAGCTaGAGGGACAGCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHETRLS*RDSSRA
Trigger: GGCCCTGGAGCTGTCCCTGCAGCTCAACCGCGTCTC...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCCAGGCCTCCAGCTCCTaGGTGAGCGCCACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPQASSS*VSATFW
Trigger: CCAGAAGGTGGCGCTCACGCAGGAGCTGGAGGCCTG...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATCAGGCCTCCAGCTCCTaGGTGAGCGCCACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHQASSS*VSATFW
Trigger: CCAGAAGGTGGCGCTCACGCAGGAGCTGGAGGCCTG...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGCCCACCTGGAGCTCCTaGCCCACAAAGCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQPTWSS*PTKLAP
Trigger: AGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGG...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCTGTTCACCTGCCCCTaGCACCCACCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGLFTCP*HPPGAP
Trigger: AGGAGCTCCAGGTGGGTGGCAGGGGCAGGTGAACAG...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCGACACGTCGGCGTCCTaGAGGCGTGACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPDTSAS*RRDSSS
Trigger: GGAGGAGGAGTCACGCCTCCAGGACGCCGACGTGTC...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAATCGGCGCCCTGGCCCTaGTCGCCGTCGTCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPESAPWP*SPSSRL
Trigger: CAGCCTCGACGACGGCGACCAGGGCCAGGGCGCCGA...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGCGCCTTTCGGGTCTTTaGGGACCGGGTGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQRLSGL*GPGGRG
Trigger: ACCCCGACCACCCGGTCCCCAAAGACCCGAAAGGCG...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTCCGGGGGTGAAGGCTaGGGGCTGGACGCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLASGGEG*GLDAFR
Trigger: CCGAAAGGCGTCCAGCCCCCAGCCTTCACCCCCGGA...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CTGGCCCCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCGGGATGTTCGCTTCTTaGGGGGCTCTAAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: LAPAPDEPLLPMSPCPASGMFAS*GALRSL
Trigger: AAGAGATCTTAGAGCCCCCCAAGAAGCGAACATCCC...GGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGATGTTCGCTTCTTaGGGGGCTCTAAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGGMFAS*GALRSL
Trigger: AAGAGATCTTAGAGCCCCCCAAGAAGCGAACATCCC...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCCCACCTTCTGGCGGATaGCGCGCAGCAGCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLAPPSGG*RAAAPE
Trigger: CTCGGGAGCTGCTGCGCGCCATCCGCCAGAAGGTGG...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGTGAGCGCCACCTTCTaGCGGATGGCGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RGGHQLLLEDNLGPVAPLVSATF*RMARSS
Trigger: GCTGCTGCGCGCCATCCGCCAGAAGGTGGCGCTCAC...CAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGCCTGCCCCACAAAGCTaGCCCCTGCTCCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQPAPQS*PLLRMS
Trigger: GCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGG...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATCCCCTGCCACCCACCTaGAGCTCCTGCCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHPLPPT*SSCPTK
Trigger: CTTTGTGGGGCAGGAGCTCCAGGTGGGTGGCAGGGG...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCCCTCGCCGGAGCTCATaGTTCTCCTGCTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPPRRSS*FSCWSR
Trigger: GCGGCTCCAGCAGGAGAACCATGAGCTCCGGCGAGG...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCGCTGTGGGCCAGTTCTaGCTGCAACGAGGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPAVGQF*LQRGSR
Trigger: TCGGCTGCCTCGTTGCAGTCAGAACTGGCCCACAGC...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATGCTGTGGGCCAGTTCTaGCTGCAACGAGGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHAVGQF*LQRGSR
Trigger: TCGGCTGCCTCGTTGCAGTCAGAACTGGCCCACAGC...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTCCAGCGAGACGCGGTTaGGCTGCAGGGACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSIPARRG*AAGTAP
Trigger: TGGAGCTGTCCCTGCAGCTCAACCGCGTCTCGCTGG...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTCCTCCAGCTCCTGCGTaGGCGCCACCTTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPPPAPA*APPSGG
Trigger: TCCGCCAGAAGGTGGCGCTCACGCAGGAGCTGGAGG...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCCTCCAGCTCCTGCGTaGGCGCCACCTTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLPPAPA*APPSGG
Trigger: TCCGCCAGAAGGTGGCGCTCACGCAGGAGCTGGAGG...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCCTCCTTCTGGCGCTGTaGGCGCAGCTGCTGCCCGAT +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLALLLAL*AQLLPD
Trigger: ATCGGGCAGCAGCTGCGCTCACAGCGCCAGAAGGAG...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCAGCCCCTGCTCCCGATaGGCCCTTGCCCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLASPCSR*ALAQHP
Trigger: AGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCT...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCGGCCCCTGCTCCGGATaGGCCCCTGCTCCCGATGAG +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSGPCSG*APAPDE
Trigger: CTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCC...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGGGCCCCTGCTCCGGATaGGCCCCTGCTCCCGATGAG +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKGPCSG*APAPDE
Trigger: CTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCC...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTCCTCACGCTCCAAGTaGTGGGCGCTCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHSSRSK*WALSVS
Trigger: GGAGACGCTGAGCGCCCAGCACTTGGAGCGTGAGGA...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCCGCCCACTGTCCTGCTaGTCTGAGCGCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLARPLSC*SERCSP
Trigger: TGGGGAGCAGCGCTCAGAGCAGCAGGACAGTGGGCG...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATCTGAGCCGGAGGTTCTaGTCGCTGAGCTCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHLSRRF*SLSSLR
Trigger: CCTCAGCGAGCTCAGCGAGCAGAACCTCCGGCTCAG...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCCGCAGCTCCTTCTaGCTCTGCAGCTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: RGGHQLLLEDNLGPVAPLARSSF*LCSSSR
Trigger: GCGGGAAGAGCTGCAGAGGCAGAAGGAGCTGCGGGC...CAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGAGACGCGGTTGAGCTaGAGGGACAGCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSIETRLS*RDSSRA
Trigger: GGCCCTGGAGCTGTCCCTGCAGCTCAACCGCGTCTC...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGCCCGATCACCACCTaGATGTCGTCCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHCPITT*MSSCQA
Trigger: GGCCTGGCAGGACGACATGCAGGTGGTGATCGGGCA...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATCTGTTCACCTGCCCCTaGCACCCACCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHLFTCP*HPPGAP
Trigger: AGGAGCTCCAGGTGGGTGGCAGGGGCAGGTGAACAG...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCGCAGGCCTCGGATCTaGGCCTCCAGGTCCTGCCGG +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSRRPRI*ASRSCR
Trigger: CCGGCAGGACCTGGAGGCCCAGATCCGAGGCCTGCG...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGAGCAGCAACTCCTCGTaGGTGGTCTGCAGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGSSNSS*VVCSLP
Trigger: GGGCAGACTGCAGACCACCCACGAGGAGTTGCTGCT...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGACACGTCGGCGTCCTaGAGGCGTGACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSIDTSAS*RRDSSS
Trigger: GGAGGAGGAGTCACGCCTCCAGGACGCCGACGTGTC...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTCCACCTTCTGGCGGATaGCGCGCAGCAGCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPPPSGG*RAAAPE
Trigger: CTCGGGAGCTGCTGCGCGCCATCCGCCAGAAGGTGG...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCGCGCTCAGCTCCTTCTaGCGCTGTGAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLAALSSF*RCERSC
Trigger: GCAGCTGCGCTCACAGCGCCAGAAGGAGCTGAGCGC...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCCTTGCCCAGCATCCTaGGGCGGGGAGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLPCPAS*GGEGIS
Trigger: GCTGATGCCCTCCCCGCCCCAGGATGCTGGGCAAGG...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTCCTGCCCCACAAAGCTaGCCCCTGCTCCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSIPAPQS*PLLRMS
Trigger: GCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGG...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCGCAAGCGCCGTTTTTaGCGCCTGAGTCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGRKRRF*RLSLAE
Trigger: CTCTGCCAGACTCAGGCGCCAAAAACGGCGCTTGCG...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGCCTGGGGAAGGGTTTTaGTTTCATTCTAAGTGTGAG +
Preference number: 4 (lower is better)
Translates to: APDEPLLPMSPCPASWGGPGEGF*FHSKCE
Trigger: CTCACACTTAGAATGAAACCAAAACCCTTCCCCAGG...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR TCA 90 bp CGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGACTGTCCTGCTGCTCTaGGCGCTGCTCCCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RGGHQLLLEDNLGPVAPLTVLLL*ALLPKL
Trigger: CAGCTTGGGGAGCAGCGCTCAGAGCAGCAGGACAGT...CAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCGGCGTCCTGGAGGCGTaGCTCCTCCTCCAGCTCGGA +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSGVLEA*LLLQLG
Trigger: TCCGAGCTGGAGGAGGAGTCACGCCTCCAGGACGCC...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCCAGCGAGACGCGGTTaGGCTGCAGGGACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLPARRG*AAGTAP
Trigger: TGGAGCTGTCCCTGCAGCTCAACCGCGTCTCGCTGG...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTCTCCTTCTGGCGCTGTaGGCGCAGCTGCTGCCCGAT +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPLLLAL*AQLLPD
Trigger: ATCGGGCAGCAGCTGCGCTCACAGCGCCAGAAGGAG...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCCGGGGCTTCTGGACCTaGGGTCGCAAGCGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLARGFWT*GRKRRF
Trigger: AAAACGGCGCTTGCGACCTCAGGTCCAGAAGCCCCG...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGAGAGCTCATGTCACCTaGAGCATCTGCGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGRAHVT*SICGDR
Trigger: CCTGTCCCCGCAGATGCTGCAGGTGACATGAGCTCT...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCGCTCCAGAAGCATCTTaGCGAGCTCCGCGGCCAACA +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPAPEAS*RAPRPT
Trigger: TGTTGGCCGCGGAGCTCGGCAAGATGCTTCTGGAGC...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCTCAGCGTCTCCAGCTaGCGCCGCAGCTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGLSVSS*RRSSSF
Trigger: AAATGAAGAGCTGCGGCGGCAGCTGGAGACGCTGAG...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTCCTCACGCTCCAAGTaGTGGGCGCTCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLASSRSK*WALSVS
Trigger: GGAGACGCTGAGCGCCCAGCACTTGGAGCGTGAGGA...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCTCGCTGAGGGCCCGTaGCCGTTCTCGCCCACTGTC +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSLAEGP*PFSPTV
Trigger: GACAGTGGGCGAGAACGGGCACGGGCCCTCAGCGAG...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAACTCGCTGAGGGCCCGTaGCCGTTCTCGCCCACTGTC +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPELAEGP*PFSPTV
Trigger: GACAGTGGGCGAGAACGGGCACGGGCCCTCAGCGAG...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCCTGAGCCGGAGGTTCTaGTCGCTGAGCTCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLALSRRF*SLSSLR
Trigger: CCTCAGCGAGCTCAGCGAGCAGAACCTCCGGCTCAG...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTCCTGCCGGCGGCTCTaGAGCATCTGGTTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLASCRRL*SIWFSP
Trigger: GGGGGAAAACCAGATGCTGCAGAGCCGCCGGCAGGA...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATCAGGGACTGCAGCTCTaGCTGCTGCAGCGAGATCTC +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHQGLQL*LLQRDL
Trigger: GAGATCTCGCTGCAGCAGGCAGAGCTGCAGTCCCTG...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCAGCTCCTTCTGCCTCTaGAGCTCTTCCCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPSSFCL*SSSRRD
Trigger: GTCCCTGCGGGAAGAGCTGCAGAGGCAGAAGGAGCT...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCCCGCAGCTCCTTCTaGCTCTGCAGCTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPARSSF*LCSSSR
Trigger: GCGGGAAGAGCTGCAGAGGCAGAAGGAGCTGCGGGC...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTCAGGCCTCCAGCTCCTaGGTGAGCGCCACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPQASSS*VSATFW
Trigger: CCAGAAGGTGGCGCTCACGCAGGAGCTGGAGGCCTG...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCGCTGTGAGCGCAGCTaGTGCCCGATCACCACCTGC +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLRCERS*CPITTC
Trigger: GCAGGTGGTGATCGGGCAGCAGCTGCGCTCACAGCG...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCAGCAGCAACTCCTCGTaGGTGGTCTGCAGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPSSNSS*VVCSLP
Trigger: GGGCAGACTGCAGACCACCCACGAGGAGTTGCTGCT...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCCCGTCGTCGAGGCTGTaGGCCAGTTCTGACTGCAAC +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPPSSRL*ASSDCN
Trigger: GTTGCAGTCAGAACTGGCCCACAGCCTCGACGACGG...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCTCCGGGGGTGAAGGCTaGGGGCTGGACGCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSSGGEG*GLDAFR
Trigger: CCGAAAGGCGTCCAGCCCCCAGCCTTCACCCCCGGA...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGGTGAGCGCCACCTTCTaGCGGATGGCGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKVSATF*RMARSS
Trigger: GCTGCTGCGCGCCATCCGCCAGAAGGTGGCGCTCAC...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGCAAGGGCAGCCCTCTaGGCCCAGCCGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPEARAAL*AQPSGP
Trigger: AGGACCTGACGGCTGGGCCCAGAGGGCTGCCCTTGC...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCCCCTGCCACCCACCTaGAGCTCCTGCCCCACAAAG +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLPLPPT*SSCPTK
Trigger: CTTTGTGGGGCAGGAGCTCCAGGTGGGTGGCAGGGG...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CCTGCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCCTTTCTTTCTATGAATaGGGGCCAAATCGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: PAPDEPLLPMSPCPASWGLSFYE*GPNRWS
Trigger: ACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAG...GCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTACTGTCCTGCTGCTCTaGGCGCTGCTCCCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPTVLLL*ALLPKL
Trigger: CAGCTTGGGGAGCAGCGCTCAGAGCAGCAGGACAGT...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATGCGTCCAGTTCCCTCTaGAGTTCCTGCTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHASSSL*SSCSVW
Trigger: CCAGACTGAGCAGGAACTTCAGAGGGAACTGGACGC...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp TCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGGCTCCAGCCAGTGCCTaGGCCTGGCACTGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: SFGRQSGPCRSIGLKRKVAPASA*AWHCPR
Trigger: TCGGGGACAGTGCCAGGCTCAGGCACTGGCTGGAGC...CACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGCTCCTTCTGGCGCTGTaGGCGCAGCTGCTGCCCGAT +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKLLLAL*AQLLPD
Trigger: ATCGGGCAGCAGCTGCGCTCACAGCGCCAGAAGGAG...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTTTCGGAAGAGGTTACTaGGAAAGCCACCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSIFGRGY*ESHRRA
Trigger: GGCCCGCCGGTGGCTTTCTCAGTAACCTCTTCCGAA...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGCCCCTGCTCCCGATaGGCCCTTGCCCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKSPCSR*ALAQHP
Trigger: AGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCT...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCGATGCTCGGCTCTGCTaGTGCCTTGTGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLADARLC*CLVAWT
Trigger: TGTCCAGGCCACAAGGCATCAGCAGAGCCGAGCATC...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGAGAGCTCATGTCACCTaGAGCATCTGCGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQRAHVT*SICGDR
Trigger: CCTGTCCCCGCAGATGCTGCAGGTGACATGAGCTCT...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTTCCTTCTGCTGCAGCTaGAAGGCTAGGTCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSISFCCS*KARSSG
Trigger: GCCCGAGGACCTAGCCTTGCAGCTGCAGCAGAAGGA...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCCTCAGCGTCTCCAGCTaGCGCCGCAGCTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPLSVSS*RRSSSF
Trigger: AAATGAAGAGCTGCGGCGGCAGCTGGAGACGCTGAG...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGTCTCGCCCACTGTCCTaGTGCTCTGAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLSRPLS*CSERCS
Trigger: GGAGCAGCGCTCAGAGCAGCAGGACAGTGGGCGAGA...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGCTCGCTGAGGGCCCGTaGCCGTTCTCGCCCACTGTC +
Preference number: 4 (lower is better)
Translates to: SFGRQSGPCRSIGLKRKVLAEGP*PFSPTV
Trigger: GACAGTGGGCGAGAACGGGCACGGGCCCTCAGCGAG...CACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCTGAGCCGGAGGTTCTaGTCGCTGAGCTCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLLSRRF*SLSSLR
Trigger: CCTCAGCGAGCTCAGCGAGCAGAACCTCCGGCTCAG...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGATCTGGTTTTCCCCCTaGAGACTCTCCAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQIWFSP*RLSSRV
Trigger: GACGCGGCTGGAGAGTCTGCAGGGGGAAAACCAGAT...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGTCCTCGTGGGTGGTCTaGAGTCTGCCCTCACCCTTC +
Preference number: 4 (lower is better)
Translates to: RGGHQLLLEDNLGPVAPLSSWVV*SLPSPF
Trigger: GAAGGGTGAGGGCAGACTGCAGACCACCCACGAGGA...CAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGGGCCAGTTCTGACTaGAACGAGGCAGCCGACACG +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLAWASSD*NEAADT
Trigger: CGTGTCGGCTGCCTCGTTGCAGTCAGAACTGGCCCA...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGGACTGCAGCTCTGCCTaGTGCAGCGAGATCTCATCT +
Preference number: 4 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGDCSSA*CSEISS
Trigger: AGATGAGATCTCGCTGCAGCAGGCAGAGCTGCAGTC...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCAGCTCCTTCTGCCTCTaGAGCTCTTCCCGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLASSFCL*SSSRRD
Trigger: GTCCCTGCGGGAAGAGCTGCAGAGGCAGAAGGAGCT...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCGAGACGCGGTTGAGCTaGAGGGACAGCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSETRLS*RDSSRA
Trigger: GGCCCTGGAGCTGTCCCTGCAGCTCAACCGCGTCTC...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGCCCACCTGGAGCTCCTaGCCCACAAAGCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKPTWSS*PTKLAP
Trigger: AGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGG...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTCTGTTCACCTGCCCCTaGCACCCACCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPLFTCP*HPPGAP
Trigger: AGGAGCTCCAGGTGGGTGGCAGGGGCAGGTGAACAG...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGAATTGCCACAGCTGCTaGAGCGACTCGCAGGTACCC +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQNCHSC*SDSQVP
Trigger: GGGTACCTGCGAGTCGCTGCAGCAGCTGTGGCAATT...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTATGGCAGCACACACCTaGTGTGTCCCAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSIMAAHT*CVPGAL
Trigger: CAGAGCCCCTGGGACACAGCAGGTGTGTGCTGCCAT...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTCATGGTTCTCCTGCTaGAGCCGTTCCTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPSWFSC*SRSSRS
Trigger: GGAGCGTGAGGAACGGCTCCAGCAGGAGAACCATGA...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389347.4
ENST00000572449.6
CDS-3UTR CCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGTCATGGTTCTCCTGCTaGAGCCGTTCCTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQSWFSC*SRSSRS
Trigger: GGAGCGTGAGGAACGGCTCCAGCAGGAGAACCATGA...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389347.4
ENST00000572449.6
CDS-3UTR CCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGCAACTCCTCGTGGGTaGTCTGCAGTCTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSIATPRG*SAVCPH
Trigger: GTGAGGGCAGACTGCAGACCACCCACGAGGAGTTGC...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCGCCTTTCGGGTCTTTaGGGACCGGGTGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSRLSGL*GPGGRG
Trigger: ACCCCGACCACCCGGTCCCCAAAGACCCGAAAGGCG...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGGCCCTGTCGCTCCATTaGCCTGAAGAGGAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGALSLH*PEEESE
Trigger: CTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATGAGGGGAGAAAGGGGTaGTGCTGCTGTGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHEGRKG*CCCDEV
Trigger: GACCTCATCACAGCAGCACCACCCCTTTCTCCCCTC...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR TCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGCTGTGGGCCAGTTCTaGCTGCAACGAGGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPEAVGQF*LQRGSR
Trigger: TCGGCTGCCTCGTTGCAGTCAGAACTGGCCCACAGC...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATGTATCTCCGCTGGACTaGGGGATGTTCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHVSPLD*GMFASW
Trigger: CCAAGAAGCGAACATCCCTCAGTCCAGCGGAGATAC...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGGCCCAAAAACCTGTCTaGCCAGCGGGGGAATGCCCT +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLAQKPV*PAGECP
Trigger: AGGGCATTCCCCCGCTGGTCAGACAGGTTTTTGGGC...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCTCCAGAAGCATCTTaGCGAGCTCCGCGGCCAACA +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPAPEAS*RAPRPT
Trigger: TGTTGGCCGCGGAGCTCGGCAAGATGCTTCTGGAGC...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTCAGGGACTGCAGCTCTaGCTGCTGCAGCGAGATCTC +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPQGLQL*LLQRDL
Trigger: GAGATCTCGCTGCAGCAGGCAGAGCTGCAGTCCCTG...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGGCCCGCAGCTCCTTCTaGCTCTGCAGCTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: SFGRQSGPCRSIGLKRKVARSSF*LCSSSR
Trigger: GCGGGAAGAGCTGCAGAGGCAGAAGGAGCTGCGGGC...CACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCTCTGAGAGGGCACTGTaGAGGGCCTCCCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSSERAL*RASPGS
Trigger: AGACCCTGGGGAGGCCCTGCACAGTGCCCTCTCAGA...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCACCTGCATGTCGTCCTaGCAGGCCTCCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSTCMSS*QASSSC
Trigger: GCAGGAGCTGGAGGCCTGGCAGGACGACATGCAGGT...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCTGCCCGATCACCACCTaGATGTCGTCCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSCPITT*MSSCQA
Trigger: GGCCTGGCAGGACGACATGCAGGTGGTGATCGGGCA...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAACGCTGTGAGCGCAGCTaGTGCCCGATCACCACCTGC +
Preference number: 4 (lower is better)
Translates to: ASFGRQSGPCRSIGLKRKRCERS*CPITTC
Trigger: GCAGGTGGTGATCGGGCAGCAGCTGCGCTCACAGCG...TTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCAGAAAGGGGTGGTGCTaGTGTGATGAGGTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLARKGWC*CDEVGE
Trigger: CTCCCCGACCTCATCACAGCAGCACCACCCCTTTCT...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGAAGCTGGGCCCATCTaGAGAGCTCATGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSIEAGPI*RAHVTC
Trigger: GCAGGTGACATGAGCTCTCCAGATGGGCCCAGCTTC...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR CCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCGAAGCTGGGCCCATCTaGAGAGCTCATGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLAEAGPI*RAHVTC
Trigger: GCAGGTGACATGAGCTCTCCAGATGGGCCCAGCTTC...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR CCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAATCACGCTCCAAGTGCTaGGCGCTCAGCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPESRSKC*ALSVSS
Trigger: GCTGGAGACGCTGAGCGCCCAGCACTTGGAGCGTGA...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR CCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGCCTCGCCGGAGCTCATaGTTCTCCTGCTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKPRRSS*FSCWSR
Trigger: ACGGCTCCAGCAGGAGAACCATGAGCTCCGGCGAGG...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389347.4
ENST00000572449.6
CDS-3UTR CCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCCGTCGTCGAGGCTGTaGGCCAGTTCTGACTGCAAC +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLPSSRL*ASSDCN
Trigger: GTTGCAGTCAGAACTGGCCCACAGCCTCGACGACGG...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAACGCCTTTCGGGTCTTTaGGGACCGGGTGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: ASFGRQSGPCRSIGLKRKRLSGL*GPGGRG
Trigger: ACCCCGACCACCCGGTCCCCAAAGACCCGAAAGGCG...TTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGGCGCTCAGCTCCTTCTaGCGCTGTGAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SFGRQSGPCRSIGLKRKVALSSF*RCERSC
Trigger: GCAGCTGCGCTCACAGCGCCAGAAGGAGCTGAGCGC...CACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTTCGGGGGTTAACCTCTaGCCCACTCTCTCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPSGVNL*PTLSRP
Trigger: GGGCCTAGAGAGAGTGGGCCAGAGGTTAACCCCCGA...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCGCAGGCACAGAGAGATaGCGATGGAGGGACAGACAC +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLAAGTER*RWRDRH
Trigger: GTGTCTGTCCCTCCATCGCCATCTCTCTGTGCCTGC...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGTCATGGTTCTCCTGCTaGAGCCGCTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLSWFSC*SRSSCC
Trigger: GCAGCAGCTGGAGCGGCTCCAGCAGGAGAACCATGA...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642419.1
CDS-3UTR TCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGGCGTCCAGTTCCCTCTaGAGTTCCTGCTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLASSSL*SSCSVW
Trigger: CCAGACTGAGCAGGAACTTCAGAGGGAACTGGACGC...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCGTGAGGGAGGAAGCGTaGGCAAGACCCAGAGATTTA +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPVREEA*ARPRDL
Trigger: TAAATCTCTGGGTCTTGCTCACGCTTCCTCCCTCAC...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp GCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAATCTCGCCCACTGTCCTaGTGCTCTGAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ASFGRQSGPCRSIGLKRKSRPLS*CSERCS
Trigger: GGAGCAGCGCTCAGAGCAGCAGGACAGTGGGCGAGA...TTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTATCTGGTTTTCCCCCTaGAGACTCTCCAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPIWFSP*RLSSRV
Trigger: GACGCGGCTGGAGAGTCTGCAGGGGGAAAACCAGAT...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAATCCTCGTGGGTGGTCTaGAGTCTGCCCTCACCCTTC +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPESSWVV*SLPSPF
Trigger: GAAGGGTGAGGGCAGACTGCAGACCACCCACGAGGA...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAATGGGCCAGTTCTGACTaGAACGAGGCAGCCGACACG +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPEWASSD*NEAADT
Trigger: CGTGTCGGCTGCCTCGTTGCAGTCAGAACTGGCCCA...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAATCTGAGAGGGCACTGTaGAGGGCCTCCCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ASFGRQSGPCRSIGLKRKSERAL*RASPGS
Trigger: AGACCCTGGGGAGGCCCTGCACAGTGCCCTCTCAGA...TTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAACCTGCATGTCGTCCTaGCAGGCCTCCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ASFGRQSGPCRSIGLKRKTCMSS*QASSSC
Trigger: GCAGGAGCTGGAGGCCTGGCAGGACGACATGCAGGT...TTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGTGCCCGATCACCACCTaGATGTCGTCCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SFGRQSGPCRSIGLKRKVCPITT*MSSCQA
Trigger: GGCCTGGCAGGACGACATGCAGGTGGTGATCGGGCA...CACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATACCCAGCCCCATCCCTaGCCTAGAAAAGATAGACGT +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHTQPHP*PRKDRR
Trigger: ACGTCTATCTTTTCTAGGGCAGGGATGGGGCTGGGT...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGCCTCGCCGGAGCTCATaGTTCTCCTGCTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: SFGRQSGPCRSIGLKRKVPRRSS*FSCWSR
Trigger: ACGGCTCCAGCAGGAGAACCATGAGCTCCGGCGAGG...CACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389347.4
ENST00000572449.6
CDS-3UTR CCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGCAACTCCTCGTGGGTaGTCTGCAGTCTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPEATPRG*SAVCPH
Trigger: GTGAGGGCAGACTGCAGACCACCCACGAGGAGTTGC...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCTGGTCAGCCCCGCCCTaGCCCAAAAACCTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSWSAPP*PKNLSD
Trigger: GTCAGACAGGTTTTTGGGCCAGGGCGGGGCTGACCA...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp TCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGTCATGGTTCTCCTGCTaGAGCCGCTGTGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SFGRQSGPCRSIGLKRKVSWFSC*SRCGGQ
Trigger: CTGGCCCCCACAGCGGCTCCAGCAGGAGAACCATGA...CACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAAGAGTCCAGAGGGCATaGACACATGCCGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPERVQRA*THAGAR
Trigger: CCTGGCTCCGGCATGTGTCCATGCCCTCTGGACTCT...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR TCA 90 bp TACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATGGGAGAGGCGCCCCCTaGGAGCGGCCCGGACGGGAA +
Preference number: 4 (lower is better)
Translates to: YHALSFYEWGPNRWSDLYGRGAP*ERPGRE
Trigger: TTCCCGTCCGGGCCGCTCTCAGGGGGCGCCTCTCCC...ATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000572449.6
ENST00000642419.1
CDS-3UTR TCA 90 bp TCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGTTCGGAAGAGGTTACTaGGAAAGCCACCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SFGRQSGPCRSIGLKRKVFGRGY*ESHRRA
Trigger: GGCCCGCCGGTGGCTTTCTCAGTAACCTCTTCCGAA...CACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGGCCGTTTTTGGCGCCTaGGTCTGGCAGAGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKAVFGA*VWQSSS
Trigger: GCTTGAACTCTGCCAGACTCAGGCGCCAAAAACGGC...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAATGGCCAGGCTGGTCCTaGACTCCTGGCCTTAAGCGA +
Preference number: 4 (lower is better)
Translates to: ASFGRQSGPCRSIGLKRKWPGWS*TPGLKR
Trigger: TCGCTTAAGGCCAGGAGTTCAGGACCAGCCTGGCCA...TTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTAGGTCTTTCTCCTTCTaGTGCAGCTGCAAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSIRSFSF*CSCKAR
Trigger: CCTAGCCTTGCAGCTGCAGCAGAAGGAGAAAGACCT...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAAGCTCATGGTTCTCCTaGTGGAGCCGTTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPESSWFS*WSRSSR
Trigger: GCGTGAGGAACGGCTCCAGCAGGAGAACCATGAGCT...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389347.4
ENST00000572449.6
CDS-3UTR GCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGATCTGGTTTTCCCCCTaGAGACTCTCCAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKIWFSP*RLSSRV
Trigger: GACGCGGCTGGAGAGTCTGCAGGGGGAAAACCAGAT...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAATCTGGTTTTCCCCCTaGAGACTCTCCAGCCGCGTC +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPEIWFSP*RLSSRV
Trigger: GACGCGGCTGGAGAGTCTGCAGGGGGAAAACCAGAT...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTACCCAGCCCCATCCCTaGCCTAGAAAAGATAGACGT +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSITQPHP*PRKDRR
Trigger: ACGTCTATCTTTTCTAGGGCAGGGATGGGGCTGGGT...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGGAAGCTGGGCCCATCTaGAGAGCTCATGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKEAGPI*RAHVTC
Trigger: GCAGGTGACATGAGCTCTCCAGATGGGCCCAGCTTC...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR CCA 90 bp GCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAAGCAGCAACTCCTCGTaGGTGGTCTGCAGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ASFGRQSGPCRSIGLKRKSSNSS*VVCSLP
Trigger: GGGCAGACTGCAGACCACCCACGAGGAGTTGCTGCT...TTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGGTGAAGGCTGGGGGCTaGACGCCTTTCGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SFGRQSGPCRSIGLKRKVVKAGG*TPFGSL
Trigger: CAAAGACCCGAAAGGCGTCCAGCCCCCAGCCTTCAC...CACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGGGGATGTTCGCTTCTTaGGGGGCTCTAAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQGMFAS*GALRSL
Trigger: AAGAGATCTTAGAGCCCCCCAAGAAGCGAACATCCC...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCCTCCAGTATCTCCGCTaGACTGAGGGATGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLALQYLR*TEGCSL
Trigger: AAGCGAACATCCCTCAGTCCAGCGGAGATACTGGAG...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTTTTGGAAGACAATCTaGGCCCTGTCGCTCCATTGG +
Preference number: 4 (lower is better)
Translates to: GGEGISFFWKTIWALSLHFWKTI*ALSLHW
Trigger: CCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAA...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGCTGAGGGAACAAGCGTaGGTTCTTGGAGGAAATGAA +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQLREQA*VLGGNE
Trigger: TTCATTTCCTCCAAGAACTCACGCTTGTTCCCTCAG...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCTGCAGCTCTGCCTGCTaGAGCGAGATCTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSCSSAC*SEISSC
Trigger: GCAAGATGAGATCTCGCTGCAGCAGGCAGAGCTGCA...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTCTCCAGTATCTCCGCTaGACTGAGGGATGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPLQYLR*TEGCSL
Trigger: AAGCGAACATCCCTCAGTCCAGCGGAGATACTGGAG...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGCCCTGTCGCTCCATTaGCCTGAAGAGGAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPEALSLH*PEEESE
Trigger: CTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTTTTGGAAGACAATCTaGGCCCTGTCGCTCCATTGG +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLAFWKTI*ALSLHW
Trigger: CCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAA...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGGTGAGGGGGAGATTCTaGTTGAGGAGTGAAATGATC +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQVRGRF*LRSEMI
Trigger: GATCATTTCACTCCTCAACCAGAATCTCCCCCTCAC...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR TCA 90 bp TACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATGCCCCCTCCCAGGAATaGGTCCCGCCGCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: YHALSFYEWGPNRWSDLYAPSQE*VPPLQH
Trigger: GTGCTGGAGCGGCGGGACTCATTCCTGGGAGGGGGC...ATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000572449.6
ENST00000642419.1
CDS-3UTR TCA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACAGATCTCTTCCGGGGGTaGAGGCTGGGGGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTDLFRG*RLGAGR
Trigger: GCGTCCAGCCCCCAGCCTTCACCCCCGGAAGAGATC...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGTACTCTGTCCGATCTTaGTACATAAATACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQYSVRS*YINTQP
Trigger: GGGCTGGGTATTTATGTATCAAGATCGGACAGAGTA...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCTCTTTCTTTCTATaGATGGGGGCCAAATCGGTG +
Preference number: 4 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLACSFFL*MGAKSV
Trigger: CACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCA...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAATCTTTCTCCTTCTGCTaGAGCTGCAAGGCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPESFSFC*SCKARS
Trigger: GGACCTAGCCTTGCAGCTGCAGCAGAAGGAGAAAGA...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGTCTTTCTCCTTCTaGTGCAGCTGCAAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKRSFSF*CSCKAR
Trigger: CCTAGCCTTGCAGCTGCAGCAGAAGGAGAAAGACCT...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCAGGTCTTTCTCCTTCTaGTGCAGCTGCAAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSRSFSF*CSCKAR
Trigger: CCTAGCCTTGCAGCTGCAGCAGAAGGAGAAAGACCT...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCAGCGAGATCTCATCTTaGAGCTTGGCCACTTCCACC +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSSEISS*SLATST
Trigger: GGTGGAAGTGGCCAAGCTGCAAGATGAGATCTCGCT...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGACAATTGCCACAGCTaGTGCAGCGACTCGCAGGTA +
Preference number: 4 (lower is better)
Translates to: ASFGRQSGPCRSIGLKRKDNCHS*CSDSQV
Trigger: TACCTGCGAGTCGCTGCAGCAGCTGTGGCAATTGTC...TTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATGGAGCCGCTCCAGCTaGTGCCGGGGCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTWSRSS*CRGFWT
Trigger: GGTCCAGAAGCCCCGGCAGCAGCTGGAGCGGCTCCA...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642419.1
CDS-3UTR CCA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATCCGGGGGTGAAGGCTaGGGGCTGGACGCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTSGGEG*GLDAFR
Trigger: CCGAAAGGCGTCCAGCCCCCAGCCTTCACCCCCGGA...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCTCCAGTATCTCCGCTaGACTGAGGGATGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSLQYLR*TEGCSL
Trigger: AAGCGAACATCCCTCAGTCCAGCGGAGATACTGGAG...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCCTTTCTTTCTATGAATaGGGGCCAAATCGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: GRQSGPCRSIGLKRKVSPLSFYE*GPNRWS
Trigger: ACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAG...GGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGGGAGAGGCGCCCCCTaGGAGCGGCCCGGACGGGAA +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPGRGAP*ERPGRE
Trigger: TTCCCGTCCGGGCCGCTCTCAGGGGGCGCCTCTCCC...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572449.6
ENST00000642419.1
CDS-3UTR TCA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTACCTCCAGCTCCTGCGTaGGCGCCACCTTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLPPAPA*APPSGG
Trigger: TCCGCCAGAAGGTGGCGCTCACGCAGGAGCTGGAGG...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCTGATTTGCAGTTTTTaGAAGTCCTGGGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLLICSF*KSWAVP
Trigger: AGGGACAGCCCAGGACTTTCAAAAACTGCAAATCAG...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp GCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAATCTTTCTCCTTCTGCTaGAGCTGCAAGGCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: ASFGRQSGPCRSIGLKRKSFSFC*SCKARS
Trigger: GGACCTAGCCTTGCAGCTGCAGCAGAAGGAGAAAGA...TTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACACCTGGCACACCCAGATaGCCAGCGTGGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTPGTPR*PAWGGR
Trigger: TCTGCCTCCCCACGCTGGGCATCTGGGTGTGCCAGG...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTCTCTTAACCGAATACTaGAGAGGCAACACAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AGRASASFGRQSGPCRSILLTEY*RGNTAS
Trigger: TGAAGCTGTGTTGCCTCTGCAGTATTCGGTTAAGAG...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGGGATGTTCGCTTCTTaGGGGGCTCTAAGATCTCTT +
Preference number: 4 (lower is better)
Translates to: GISFFWKTIWALSLHWPEGMFAS*GALRSL
Trigger: AAGAGATCTTAGAGCCCCCCAAGAAGCGAACATCCC...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACAGCGCTCAGCTCCTTCTaGCGCTGTGAGCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTALSSF*RCERSC
Trigger: GCAGCTGCGCTCACAGCGCCAGAAGGAGCTGAGCGC...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTACCTTGCCCAGCATCCTaGGGCGGGGAGGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLPCPAS*GGEGIS
Trigger: GCTGATGCCCTCCCCGCCCCAGGATGCTGGGCAAGG...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACACCTGCCCCACAAAGCTaGCCCCTGCTCCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTPAPQS*PLLRMS
Trigger: GCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGG...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACAACTGTCCTGCTGCTCTaGGCGCTGCTCCCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTTVLLL*ALLPKL
Trigger: CAGCTTGGGGAGCAGCGCTCAGAGCAGCAGGACAGT...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCGCCTCCCCAGCCTCTaGCCGTGCGCGTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCRLPSL*PCAFQL
Trigger: GAGCTGGAACGCGCACGGTCAGAGGCTGGGGAGGCG...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGGATCTCTTCCGGGGGTaGAGGCTGGGGGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: IYILLCPILIHKYPAPSLDLFRG*RLGAGR
Trigger: GCGTCCAGCCCCCAGCCTTCACCCCCGGAAGAGATC...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTACCAGCGAGACGCGGTTaGGCTGCAGGGACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLPARRG*AAGTAP
Trigger: TGGAGCTGTCCCTGCAGCTCAACCGCGTCTCGCTGG...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATCGCCCACTGTCCTGCTaGTCTGAGCGCTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: YHALSFYEWGPNRWSDLYRPLSC*SERCSP
Trigger: TGGGGAGCAGCGCTCAGAGCAGCAGGACAGTGGGCG...ATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTACCGCGTCCTCAGCTCTaGTCCAGCCAGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLPRPQL*SSQCLS
Trigger: GCTCAGGCACTGGCTGGAGCAGAGCTGAGGACGCGG...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATCGCTGTGAGCGCAGCTaGTGCCCGATCACCACCTGC +
Preference number: 4 (lower is better)
Translates to: YHALSFYEWGPNRWSDLYRCERS*CPITTC
Trigger: GCAGGTGGTGATCGGGCAGCAGCTGCGCTCACAGCG...ATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGGACCACCAAGTTCACTaGTTCAAGCAGCTTAGAGTC +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKDHQVH*FKQLRV
Trigger: GACTCTAAGCTGCTTGAAGCAGTGAACTTGGTGGTC...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATCACGCTCCAAGTGCTaGGCGCTCAGCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTSRSKC*ALSVSS
Trigger: GCTGGAGACGCTGAGCGCCCAGCACTTGGAGCGTGA...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572449.6
ENST00000642419.1
CDS-3UTR CCA 90 bp TGCCCTAGAAAAGATAGACGTATATTAATTCGGAAAATAGCTCTGTTCACCTGCTCCGGGGGTGAAGGCTaGGGGCTGGACGCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: CPRKDRRILIRKIALFTCSGGEG*GLDAFR
Trigger: CCGAAAGGCGTCCAGCCCCCAGCCTTCACCCCCGGA...GCAGGTGAACAGAGCTATTTTCCGAATTAATATACGTCTATCTTTTCTAGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TGCCCTAGAAAAGATAGACGTATATTAATTCGGAAAATAGCTCTGTTCACCTGCGCAAGGGCAGCCCTCTaGGCCCAGCCGTCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: CPRKDRRILIRKIALFTCARAAL*AQPSGP
Trigger: AGGACCTGACGGCTGGGCCCAGAGGGCTGCCCTTGC...GCAGGTGAACAGAGCTATTTTCCGAATTAATATACGTCTATCTTTTCTAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGGGACTTTTAGGCCCTaGGGAAGGGTTTTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: ASFGRQSGPCRSIGLKRKGTFRP*GRVLVS
Trigger: TGAAACCAAAACCCTTCCCCAGGGCCTAAAAGTCCC...TTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACAGGAGTGGGGTGGGGGTaGAGGGTCCTTCAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTGVGWG*RVLQGG
Trigger: TCCTCCTTGAAGGACCCTCCACCCCCACCCCACTCC...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR TCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCACGCCTCCCCAGCCTCTaGCCGTGCGCGTTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPRLPSL*PCAFQL
Trigger: GAGCTGGAACGCGCACGGTCAGAGGCTGGGGAGGCG...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCACTCCTTCTGGCGCTGTaGGCGCAGCTGCTGCCCGAT +
Preference number: 4 (lower is better)
Translates to: GVIYILLCPILIHKYPAPLLLAL*AQLLPD
Trigger: ATCGGGCAGCAGCTGCGCTCACAGCGCCAGAAGGAG...TGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGGCCCCTGCTCCGGATaGGCCCCTGCTCCCGATGAG +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPGPCSG*APAPDE
Trigger: CTCATCGGGAGCAGGGGCTCATCCGGAGCAGGGGCC...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCTACTCTGTCCGATCTTaGTACATAAATACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSYSVRS*YINTQP
Trigger: GGGCTGGGTATTTATGTATCAAGATCGGACAGAGTA...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATCTCGCCCACTGTCCTaGTGCTCTGAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLSRPLS*CSERCS
Trigger: GGAGCAGCGCTCAGAGCAGCAGGACAGTGGGCGAGA...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATCCTCGTGGGTGGTCTaGAGTCTGCCCTCACCCTTC +
Preference number: 4 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTSSWVV*SLPSPF
Trigger: GAAGGGTGAGGGCAGACTGCAGACCACCCACGAGGA...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCATCGGAGACGCGCCGCTaGAGCCTCCGCAGCGCACTC +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPSETRR*SLRSAL
Trigger: GAGTGCGCTGCGGAGGCTGCAGCGGCGCGTCTCCGA...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGGGCTCTATCTGCATTaGTTCATTTCATCCACTAGA +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPGLYLH*FISSTR
Trigger: TCTAGTGGATGAAATGAAGCAATGCAGATAGAGCCC...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp GGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCACCACTCACCTCCAGCTaGTGCCGGGGCTTCTGGACC +
Preference number: 4 (lower is better)
Translates to: GVIYILLCPILIHKYPAPPLTSS*CRGFWT
Trigger: GGTCCAGAAGCCCCGGCAGCAGCTGGAGGTGAGTGG...TGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGTCTATCCACCCACACTaGTATCAATCCTCCCACATT +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKSIHPH*YQSSHI
Trigger: AATGTGGGAGGATTGATAGCAGTGTGGGTGGATAGA...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGCCTGCCCCACAAAGCTaGCCCCTGCTCCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: IYILLCPILIHKYPAPSLPAPQS*PLLRMS
Trigger: GCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGG...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp TACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATTTCGGAAGAGGTTACTaGGAAAGCCACCGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: YHALSFYEWGPNRWSDLYFGRGY*ESHRRA
Trigger: GGCCCGCCGGTGGCTTTCTCAGTAACCTCTTCCGAA...ATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TGCCCTAGAAAAGATAGACGTATATTAATTCGGAAAATAGCTCTGTTCACCTGCTCCTCACGCTCCAAGTaGTGGGCGCTCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: CPRKDRRILIRKIALFTCSSRSK*WALSVS
Trigger: GGAGACGCTGAGCGCCCAGCACTTGGAGCGTGAGGA...GCAGGTGAACAGAGCTATTTTCCGAATTAATATACGTCTATCTTTTCTAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp GGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCTCGCCCACTGTCCTaGTGCTCTGAGCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GVIYILLCPILIHKYPAPSRPLS*CSERCS
Trigger: GGAGCAGCGCTCAGAGCAGCAGGACAGTGGGCGAGA...TGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGTCCTGCCGGCGGCTCTaGAGCATCTGGTTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: IYILLCPILIHKYPAPSLSCRRL*SIWFSP
Trigger: GGGGGAAAACCAGATGCTGCAGAGCCGCCGGCAGGA...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATGGGCCAGTTCTGACTaGAACGAGGCAGCCGACACG +
Preference number: 4 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLWASSD*NEAADT
Trigger: CGTGTCGGCTGCCTCGTTGCAGTCAGAACTGGCCCA...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGACCTGCATGTCGTCCTaGCAGGCCTCCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: IYILLCPILIHKYPAPSLTCMSS*QASSSC
Trigger: GCAGGAGCTGGAGGCCTGGCAGGACGACATGCAGGT...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TGCCCTAGAAAAGATAGACGTATATTAATTCGGAAAATAGCTCTGTTCACCTGCACCTGCATGTCGTCCTaGCAGGCCTCCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CPRKDRRILIRKIALFTCTCMSS*QASSSC
Trigger: GCAGGAGCTGGAGGCCTGGCAGGACGACATGCAGGT...GCAGGTGAACAGAGCTATTTTCCGAATTAATATACGTCTATCTTTTCTAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATGTGAGCGCAGCTGCTaGCCGATCACCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLCERSC*PITTCM
Trigger: CATGCAGGTGGTGATCGGGCAGCAGCTGCGCTCACA...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCGCCTTTCGGGTCTTTaGGGACCGGGTGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCRLSGL*GPGGRG
Trigger: ACCCCGACCACCCGGTCCCCAAAGACCCGAAAGGCG...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATGTGAAGGCTGGGGGCTaGACGCCTTTCGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: YHALSFYEWGPNRWSDLYVKAGG*TPFGSL
Trigger: CAAAGACCCGAAAGGCGTCCAGCCCCCAGCCTTCAC...ATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCTCGCCGGAGCTCATaGTTCTCCTGCTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCPRRSS*FSCWSR
Trigger: GCGGCTCCAGCAGGAGAACCATGAGCTCCGGCGAGG...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGTGGGGGCCAAATCGGTaGAGTGATTTATATATTACT +
Preference number: 4 (lower is better)
Translates to: RASASFGRQSGPCRSIGLWGPNR*SDLYIT
Trigger: AGTAATATATAAATCACTCCACCGATTTGGCCCCCA...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTTGGGGGCCAAATCGGTaGAGTGATTTATATATTACT +
Preference number: 4 (lower is better)
Translates to: EGISFFWKTIWALSLHWPWGPNR*SDLYIT
Trigger: AGTAATATATAAATCACTCCACCGATTTGGCCCCCA...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTGCTGTGGGCCAGTTCTaGCTGCAACGAGGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCAVGQF*LQRGSR
Trigger: TCGGCTGCCTCGTTGCAGTCAGAACTGGCCCACAGC...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCGGGGCTTCTGGACCTaGGGTCGCAAGCGCCGTTTT +
Preference number: 4 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCRGFWT*GRKRRF
Trigger: AAAACGGCGCTTGCGACCTCAGGTCCAGAAGCCCCG...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTAGCTGTCAGTGGCACGTaGGACCACCAAGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLAVSGT*DHQVHC
Trigger: GCAGTGAACTTGGTGGTCTCACGTGCCACTGACAGC...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCTGAGCCGGAGGTTCTaGTCGCTGAGCTCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCLSRRF*SLSSLR
Trigger: CCTCAGCGAGCTCAGCGAGCAGAACCTCCGGCTCAG...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCACCGCGTCCTCAGCTCTaGTCCAGCCAGTGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPPRPQL*SSQCLS
Trigger: GCTCAGGCACTGGCTGGAGCAGAGCTGAGGACGCGG...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGCAGGGACTGCAGCTCTaGCTGCTGCAGCGAGATCTC +
Preference number: 4 (lower is better)
Translates to: IYILLCPILIHKYPAPSLQGLQL*LLQRDL
Trigger: GAGATCTCGCTGCAGCAGGCAGAGCTGCAGTCCCTG...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TGCCCTAGAAAAGATAGACGTATATTAATTCGGAAAATAGCTCTGTTCACCTGCTGTGAGCGCAGCTGCTaGCCGATCACCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: CPRKDRRILIRKIALFTCCERSC*PITTCM
Trigger: CATGCAGGTGGTGATCGGGCAGCAGCTGCGCTCACA...GCAGGTGAACAGAGCTATTTTCCGAATTAATATACGTCTATCTTTTCTAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTTCACGCTCCAAGTGCTaGGCGCTCAGCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCSRSKC*ALSVSS
Trigger: GCTGGAGACGCTGAGCGCCCAGCACTTGGAGCGTGA...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572449.6
ENST00000642419.1
CDS-3UTR CCA 90 bp TGCCCTAGAAAAGATAGACGTATATTAATTCGGAAAATAGCTCTGTTCACCTGCAGCAGCAACTCCTCGTaGGTGGTCTGCAGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: CPRKDRRILIRKIALFTCSSNSS*VVCSLP
Trigger: GGGCAGACTGCAGACCACCCACGAGGAGTTGCTGCT...GCAGGTGAACAGAGCTATTTTCCGAATTAATATACGTCTATCTTTTCTAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGTGGGGGCCAAATCGGTaGAGTGATTTATATATTACT +
Preference number: 4 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKWGPNR*SDLYIT
Trigger: AGTAATATATAAATCACTCCACCGATTTGGCCCCCA...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATTTCGGCTGCCCTTCTTaGAGGAGGGGAGAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: YHALSFYEWGPNRWSDLYFGCPS*RRGERG
Trigger: ACCCCTTTCTCCCCTCCTCCAAGAAGGGCAGCCGAA...ATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR TCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAACTGTCCTGCTGCTCTaGGCGCTGCTCCCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPTVLLL*ALLPKL
Trigger: CAGCTTGGGGAGCAGCGCTCAGAGCAGCAGGACAGT...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGGCGTCCAGTTCCCTCTaGAGTTCCTGCTCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: IYILLCPILIHKYPAPSLASSSL*SSCSVW
Trigger: CCAGACTGAGCAGGAACTTCAGAGGGAACTGGACGC...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTTCCTCGTGGGTGGTCTaGAGTCTGCCCTCACCCTTC +
Preference number: 4 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCSSWVV*SLPSPF
Trigger: GAAGGGTGAGGGCAGACTGCAGACCACCCACGAGGA...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATTGCAGCTCTGCCTGCTaGAGCGAGATCTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: YHALSFYEWGPNRWSDLYCSSAC*SEISSC
Trigger: GCAAGATGAGATCTCGCTGCAGCAGGCAGAGCTGCA...ATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTAGACTGCAGCTCTGCCTaGTGCAGCGAGATCTCATCT +
Preference number: 4 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLDCSSA*CSEISS
Trigger: AGATGAGATCTCGCTGCAGCAGGCAGAGCTGCAGTC...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCATCTGAGAGGGCACTGTaGAGGGCCTCCCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPSERAL*RASPGS
Trigger: AGACCCTGGGGAGGCCCTGCACAGTGCCCTCTCAGA...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTGGGAGAAAGGGGTGGTaGTGCTGTGATGAGGTCGGG +
Preference number: 4 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCGRKGW*CCDEVG
Trigger: CCCGACCTCATCACAGCAGCACCACCCCTTTCTCCC...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp TACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATGCCCTGTCGCTCCATTaGCCTGAAGAGGAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: YHALSFYEWGPNRWSDLYALSLH*PEEESE
Trigger: CTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC...ATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGGTATCTCCGCTGGACTaGGGGATGTTCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: IYILLCPILIHKYPAPSLVSPLD*GMFASW
Trigger: CCAAGAAGCGAACATCCCTCAGTCCAGCGGAGATAC...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp TGCCCTAGAAAAGATAGACGTATATTAATTCGGAAAATAGCTCTGTTCACCTGCGTATCTCCGCTGGACTaGGGGATGTTCGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: CPRKDRRILIRKIALFTCVSPLD*GMFASW
Trigger: CCAAGAAGCGAACATCCCTCAGTCCAGCGGAGATAC...GCAGGTGAACAGAGCTATTTTCCGAATTAATATACGTCTATCTTTTCTAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCTCCAGAAGCATCTTaGCGAGCTCCGCGGCCAACA +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPAPEAS*RAPRPT
Trigger: TGTTGGCCGCGGAGCTCGGCAAGATGCTTCTGGAGC...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTAGCTCATGGTTCTCCTaGTGGAGCCGTTCCTCACGC +
Preference number: 4 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCSSWFS*WSRSSR
Trigger: GCGTGAGGAACGGCTCCAGCAGGAGAACCATGAGCT...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572449.6
CDS-3UTR GCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCACAGGGACTGCAGCTCTaGCTGCTGCAGCGAGATCTC +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPQGLQL*LLQRDL
Trigger: GAGATCTCGCTGCAGCAGGCAGAGCTGCAGTCCCTG...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCAACTCCTCGTGGGTaGTCTGCAGTCTGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPATPRG*SAVCPH
Trigger: GTGAGGGCAGACTGCAGACCACCCACGAGGAGTTGC...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCACGCAAGCGCCGTTTTTaGCGCCTGAGTCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPRKRRF*RLSLAE
Trigger: CTCTGCCAGACTCAGGCGCCAAAAACGGCGCTTGCG...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp GGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCAGGAGGACGTCATGTTTaGGTCGACTTCTGCAGGACA +
Preference number: 4 (lower is better)
Translates to: GVIYILLCPILIHKYPAPGGRHV*VDFCRT
Trigger: TGTCCTGCAGAAGTCGACTCAAACATGACGTCCTCC...TGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR GCA 90 bp GGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCTTTCTCCTTCTGCTaGAGCTGCAAGGCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: GVIYILLCPILIHKYPAPSFSFC*SCKARS
Trigger: GGACCTAGCCTTGCAGCTGCAGCAGAAGGAGAAAGA...TGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572449.6
ENST00000642419.1
CDS-3UTR GCA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGAGCGAGATCTCATCTTaGAGCTTGGCCACTTCCACC +
Preference number: 4 (lower is better)
Translates to: IYILLCPILIHKYPAPSLSEISS*SLATST
Trigger: GGTGGAAGTGGCCAAGCTGCAAGATGAGATCTCGCT...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TGCCCTAGAAAAGATAGACGTATATTAATTCGGAAAATAGCTCTGTTCACCTGCCTCCAGTATCTCCGCTaGACTGAGGGATGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: CPRKDRRILIRKIALFTCLQYLR*TEGCSL
Trigger: AAGCGAACATCCCTCAGTCCAGCGGAGATACTGGAG...GCAGGTGAACAGAGCTATTTTCCGAATTAATATACGTCTATCTTTTCTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCTCAAAGCGGGATaGGCCTGGATGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPALKAG*AWMKVT
Trigger: TGTCACCTTCATCCAGGCCCATCCCGCTTTGAGGGC...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR TCA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGTGCTCTTTCTTTCTATaGATGGGGGCCAAATCGGTG +
Preference number: 4 (lower is better)
Translates to: IYILLCPILIHKYPAPSLCSFFL*MGAKSV
Trigger: CACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCA...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR GCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGATGAAGGTGACAATTaGCACAGCTGCTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPDEGDN*HSCCSD
Trigger: GTCGCTGCAGCAGCTGTGGCAATTGTCACCTTCATC...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR TCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCATGCTCTTTCTTTCTATaGATGGGGGCCAAATCGGTG +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPCSFFL*MGAKSV
Trigger: CACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCA...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTTCCTGGGTTTACAGATaGAACAAGCTCAAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCSWVYR*NKLKSC
Trigger: GCAACTCTTGAGCTTGTTCCATCTGTAAACCCAGGA...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CCA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCTTTCTTTCTATGAATaGGGGCCAAATCGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCLSFYE*GPNRWS
Trigger: ACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAG...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCATACTCTGTCCGATCTTaGTACATAAATACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: IGGVIYILLCPILIHKYPYSVRS*YINTQP
Trigger: GGGCTGGGTATTTATGTATCAAGATCGGACAGAGTA...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR TCA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGATTCTGGTTGAGGAGTaGAATGATCTGATTTGCAGT +
Preference number: 4 (lower is better)
Translates to: IYILLCPILIHKYPAPSLILVEE*NDLICS
Trigger: ACTGCAAATCAGATCATTTCACTCCTCAACCAGAAT...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS TCA 90 bp CTCGCTGAGGGCCCGTGCCCGTTCTCGCCCACTGTCCTGCTGCTCTaGGCGCTGCTCCCCAAGCTGGGCCCGCAGGGCCTCCACGTCCCC +
Preference number: 5 (lower is better)
Translates to: LAEGPCPFSPTVLLL*ALLPKLGPQGLHVP
Trigger: GGGGACGTGGAGGCCCTGCGGGCCCAGCTTGGGGAGCAGCGCTCAGAGCAGCAGGACAGTGGGCGAGAACGGGCACGGGCCCTCAGCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000576826.1
ENST00000642419.1
CDS CCA 90 bp AGTCCCGCCGCTCCAGCACAAAGGGGAAGAAGCCCTCGTCGCCGCTaGGAGAGGCGCCCCCTGAGAGCGGCCCGGACGGGAAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SPAAPAQRGRSPRRR*ERRPLRAARTGSWA
Trigger: GGCCCAGCTTCCCGTCCGGGCCGCTCTCAGGGGGCGCCTCTCCCAGCGGCGACGAGGGCTTCTTCCCCTTTGTGCTGGAGCGGCGGGACT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000576826.1
ENST00000642419.1
CDS CCA 90 bp CCGGGTGCGTCGGCGCCCTGGCCCTGGTCGCCGTCGTCGAGGCTGTaGGCCAGTTCTGACTGCAACGAGGCAGCCGACACGTCGGCGTCC +
Preference number: 5 (lower is better)
Translates to: PGASAPWPWSPSSRL*ASSDCNEAADTSAS
Trigger: GGACGCCGACGTGTCGGCTGCCTCGTTGCAGTCAGAACTGGCCCACAGCCTCGACGACGGCGACCAGGGCCAGGGCGCCGACGCACCCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS GCA 90 bp TCGCTGAGCTCGCTGAGGGCCCGTGCCCGTTCTCGCCCACTGTCCTaGTGCTCTGAGCGCTGCTCCCCAAGCTGGGCCCGCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SLSSLRARARSRPLS*CSERCSPSWARRAS
Trigger: GGAGGCCCTGCGGGCCCAGCTTGGGGAGCAGCGCTCAGAGCAGCAGGACAGTGGGCGAGAACGGGCACGGGCCCTCAGCGAGCTCAGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000576826.1
ENST00000642419.1
CDS GCA 90 bp GCGTCCTGGAGGCGTGACTCCTCCTCCAGCTCGGAGACGCGCCGCTaGAGCCTCCGCAGCGCACTCAGCGCCTCCCCAGCCTCTGACCGT +
Preference number: 5 (lower is better)
Translates to: ASWRRDSSSSSETRR*SLRSALSASPASDR
Trigger: ACGGTCAGAGGCTGGGGAGGCGCTGAGTGCGCTGCGGAGGCTGCAGCGGCGCGTCTCCGAGCTGGAGGAGGAGTCACGCCTCCAGGACGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS CCA 90 bp GACCGGGTGGTCGGGGTGTCTCCGGGTGCGTCGGCGCCCTGGCCCTaGTCGCCGTCGTCGAGGCTGTGGGCCAGTTCTGACTGCAACGAG +
Preference number: 5 (lower is better)
Translates to: DRVVGVSPGASAPWP*SPSSRLWASSDCNE
Trigger: CTCGTTGCAGTCAGAACTGGCCCACAGCCTCGACGACGGCGACCAGGGCCAGGGCGCCGACGCACCCGGAGACACCCCGACCACCCGGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS CCA 90 bp TTTGGGGACCGGGTGGTCGGGGTGTCTCCGGGTGCGTCGGCGCCCTaGCCCTGGTCGCCGTCGTCGAGGCTGTGGGCCAGTTCTGACTGC +
Preference number: 5 (lower is better)
Translates to: FGDRVVGVSPGASAP*PWSPSSRLWASSDC
Trigger: GCAGTCAGAACTGGCCCACAGCCTCGACGACGGCGACCAGGGCCAGGGCGCCGACGCACCCGGAGACACCCCGACCACCCGGTCCCCAAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS CCA 90 bp GCCTCCCACTCGGCTCCTCGGGCTGCCAGGCCTCGCCGGAGCTCATaGTTCTCCTGCTGGAGCCGCTGTGGGGGCCAGGGCAGAGGGACA +
Preference number: 5 (lower is better)
Translates to: ASHSAPRAARPRRSS*FSCWSRCGGQGRGT
Trigger: TGTCCCTCTGCCCTGGCCCCCACAGCGGCTCCAGCAGGAGAACCATGAGCTCCGGCGAGGCCTGGCAGCCCGAGGAGCCGAGTGGGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572240.5
ENST00000573514.5
CDS GCA 90 bp CGGCCCGGACGGGAAGCTGGGCCCATCTGGAGAGCTCATGTCACCTaGAGCATCTGCGGGGACAGGTGGCCGAAGCCGCCGGGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: RPGREAGPIWRAHVT*SICGDRWPKPPGSL
Trigger: GAGGGAGCCCGGCGGCTTCGGCCACCTGTCCCCGCAGATGCTGCAGGTGACATGAGCTCTCCAGATGGGCCCAGCTTCCCGTCCGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000576826.1
ENST00000642419.1
CDS CCA 90 bp GCACGGCGCGGGGTCGACGACGACGCGGAGGCGCTCAGCTCCTTCTaGCGCTGTGAGCGCAGCTGCTGCCCGATCACCACCTGCATGTCG +
Preference number: 5 (lower is better)
Translates to: ARRGVDDDAEALSSF*RCERSCCPITTCMS
Trigger: CGACATGCAGGTGGTGATCGGGCAGCAGCTGCGCTCACAGCGCCAGAAGGAGCTGAGCGCCTCCGCGTCGTCGTCGACCCCGCGCCGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS GCA 90 bp CCCTGGCCCTGGTCGCCGTCGTCGAGGCTGTGGGCCAGTTCTGACTaGAACGAGGCAGCCGACACGTCGGCGTCCTGGAGGCGTGACTCC +
Preference number: 5 (lower is better)
Translates to: PWPWSPSSRLWASSD*NEAADTSASWRRDS
Trigger: GGAGTCACGCCTCCAGGACGCCGACGTGTCGGCTGCCTCGTTGCAGTCAGAACTGGCCCACAGCCTCGACGACGGCGACCAGGGCCAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS TCA 90 bp CGGGGTCGACGACGACGCGGAGGCGCTCAGCTCCTTCTGGCGCTGTaGGCGCAGCTGCTGCCCGATCACCACCTGCATGTCGTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: RGRRRRGGAQLLLAL*AQLLPDHHLHVVLP
Trigger: TGGCAGGACGACATGCAGGTGGTGATCGGGCAGCAGCTGCGCTCACAGCGCCAGAAGGAGCTGAGCGCCTCCGCGTCGTCGTCGACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS CCA 90 bp TGGGCCAGTTCTGACTGCAACGAGGCAGCCGACACGTCGGCGTCCTaGAGGCGTGACTCCTCCTCCAGCTCGGAGACGCGCCGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: WASSDCNEAADTSAS*RRDSSSSSETRRCS
Trigger: GCTGCAGCGGCGCGTCTCCGAGCTGGAGGAGGAGTCACGCCTCCAGGACGCCGACGTGTCGGCTGCCTCGTTGCAGTCAGAACTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS CCA 90 bp ATGTCGTCCTGCCAGGCCTCCAGCTCCTGCGTGAGCGCCACCTTCTaGCGGATGGCGCGCAGCAGCTCCCGAGACAGGGAGTCTCGCTCC +
Preference number: 5 (lower is better)
Translates to: MSSCQASSSCVSATF*RMARSSSRDRESRS
Trigger: GGAGCGAGACTCCCTGTCTCGGGAGCTGCTGCGCGCCATCCGCCAGAAGGTGGCGCTCACGCAGGAGCTGGAGGCCTGGCAGGACGACAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS GCA 90 bp CTGAGTCTGGCAGAGTTCAAGCCCCGGCCCATGGCAGCACACACCTaGTGTGTCCCAGGGGCTCTGGAGGCCTGGACTCTGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: LSLAEFKPRPMAAHT*CVPGALEAWTLPSP
Trigger: GGGGCTGGGCAGAGTCCAGGCCTCCAGAGCCCCTGGGACACAGCAGGTGTGTGCTGCCATGGGCCGGGGCTTGAACTCTGCCAGACTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572240.5
ENST00000573514.5
CDS GCA 90 bp GACACTCACTTCCCCCTGCAGACTCTCCAGCCGCGTCCTCAGCTCTaGTCCAGCCAGTGCCTGAGCCTGGCACTGTCCCCGAAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: DTHFPLQTLQPRPQL*SSQCLSLALSPKGV
Trigger: GACGCCCTTCGGGGACAGTGCCAGGCTCAGGCACTGGCTGGAGCAGAGCTGAGGACGCGGCTGGAGAGTCTGCAGGGGGAAGTGAGTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576826.1
CDS GCA 90 bp ATCTTGCCGAGCTCCGCGGCCAACAGCAGGTCTTTCTCCTTCTGCTaGAGCTGCAAGGCTAGGTCCTCGGGCTCCTCAGGCCCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: ILPSSAANSRSFSFC*SCKARSSGSSGPGP
Trigger: GGGCCCAGGGCCTGAGGAGCCCGAGGACCTAGCCTTGCAGCTGCAGCAGAAGGAGAAAGACCTGCTGTTGGCCGCGGAGCTCGGCAAGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000576826.1
ENST00000642419.1
CDS CCA 90 bp CCCCAGCGGCCCAGGCTGTTCCCGTTCCTGGATCGCTGGGCGCCTTaGGCCGTGCACCTCCCTCAGCGGATATATACAGTTTCCTCGCCT +
Preference number: 5 (lower is better)
Translates to: PQRPRLFPFLDRWAP*AVHLPQRIYTVSSP
Trigger: AGGCGAGGAAACTGTATATATCCGCTGAGGGAGGTGCACGGCCCAAGGCGCCCAGCGATCCAGGAACGGGAACAGCCTGGGCCGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572240.5
CDS-3UTR CAA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGCAGCGAGATCTCATCTaGCAGCTTGGCCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: APDEPLLPMSPCPASWGGQRDLI*QLGHFH
Trigger: GTGGAAGTGGCCAAGCTGCAAGATGAGATCTCGCTG...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGAGGTTCAAGGTCAGATaGTCCTGGCTGATGCTCGGC +
Preference number: 5 (lower is better)
Translates to: APDEPLLPMSPCPASWGGRFKVR*SWLMLG
Trigger: GCCGAGCATCAGCCAGGACAATCTGACCTTGAACCT...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS GCA 90 bp AGCATCTTGCCGAGCTCCGCGGCCAACAGCAGGTCTTTCTCCTTCTaGTGCAGCTGCAAGGCTAGGTCCTCGGGCTCCTCAGGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: SILPSSAANSRSFSF*CSCKARSSGSSGPG
Trigger: CCCAGGGCCTGAGGAGCCCGAGGACCTAGCCTTGCAGCTGCAGCAGAAGGAGAAAGACCTGCTGTTGGCCGCGGAGCTCGGCAAGATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000576826.1
ENST00000642419.1
CDS-3UTR CAA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGGCTCCCGATGAGCCCTaGCCCAGCATCCTGGGGCGG +
Preference number: 5 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQAPDEP*PSILGR
Trigger: CCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGC...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATGCTCCCGATGAGCCCTaGCCCAGCATCCTGGGGCGG +
Preference number: 5 (lower is better)
Translates to: GGEGISFFWKTIWALSLHAPDEP*PSILGR
Trigger: CCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGC...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GCTCCGGATGAGCCCCTGCTCCCGATGAGCCCTTGCCCAGCATCCTGGGGCGGGACAGATCTTTACTCTTaGGCCCAGGCTAGAGCGCAG +
Preference number: 5 (lower is better)
Translates to: APDEPLLPMSPCPASWGGTDLYS*AQARAQ
Trigger: CTGCGCTCTAGCCTGGGCCAAAGAGTAAAGATCTGT...CCCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGCAGGGGCTCATCCGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS GCA 90 bp AGCCGTTCCTCACGCTCCAAGTGCTGGGCGCTCAGCGTCTCCAGCTaGCGCCGCAGCTCTTCATTTCGCTCCAGAAGCATCTTGCCGAGC +
Preference number: 5 (lower is better)
Translates to: SRSSRSKCWALSVSS*RRSSSFRSRSILPS
Trigger: GCTCGGCAAGATGCTTCTGGAGCGAAATGAAGAGCTGCGGCGGCAGCTGGAGACGCTGAGCGCCCAGCACTTGGAGCGTGAGGAACGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000576826.1
CDS-3UTR CAA 90 bp CACCCACCTGGAGCTCCTGCCCCACAAAGCTGGCCCCTGCTCCGGATGAGCCCCGGGCATCAGCTTCTTTaGGAAGACAATCTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: HPPGAPAPQSWPLLRMSPGHQLL*EDNLGP
Trigger: AGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCC...GGGGCTCATCCGGAGCAGGGGCCAGCTTTGTGGGGCAGGAGCTCCAGGTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS GCA 90 bp CACACTTCCTCACGCTCCAAGTGCTGGGCGCTCAGCGTCTCCAGCTaGCGCCGCAGCTCTTCATTTCGCTCCAGAAGCATCTTGCCGAGC +
Preference number: 5 (lower is better)
Translates to: HTSSRSKCWALSVSS*RRSSSFRSRSILPS
Trigger: GCTCGGCAAGATGCTTCTGGAGCGAAATGAAGAGCTGCGGCGGCAGCTGGAGACGCTGAGCGCCCAGCACTTGGAGCGTGAGGAAGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642419.1
CDS-3UTR CAA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCACGCCTTTCGGGTCTTaGGGGACCGGGTGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLATPFGS*GTGWSG
Trigger: CCCCGACCACCCGGTCCCCAAAGACCCGAAAGGCGT...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp CTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGTCCAGCGAGACGCGGTaGAGCTGCAGGGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: LSLHWPEEESEPLSGQGQSSETR*SCRDSS
Trigger: GGAGCTGTCCCTGCAGCTCAACCGCGTCTCGCTGGA...CTGCCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGCTCCCGATGAGCCCTaGCCCAGCATCCTGGGGCGG +
Preference number: 5 (lower is better)
Translates to: EGISFFWKTIWALSLHWPAPDEP*PSILGR
Trigger: CCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGC...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp CGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGCGCTCCAGAAGCATCTaGCCGAGCTCCGCGGCCAAC +
Preference number: 5 (lower is better)
Translates to: RGGHQLLLEDNLGPVAPLRSRSI*PSSAAN
Trigger: GTTGGCCGCGGAGCTCGGCAAGATGCTTCTGGAGCG...CAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000642419.1
CDS-3UTR CAA 90 bp GAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTACGCCTTTCGGGTCTTaGGGGACCGGGTGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: EGISFFWKTIWALSLHWPTPFGS*GTGWSG
Trigger: CCCCGACCACCCGGTCCCCAAAGACCCGAAAGGCGT...AGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTTCCAGCGAGACGCGGTaGAGCTGCAGGGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: AGRASASFGRQSGPCRSISSETR*SCRDSS
Trigger: GGAGCTGTCCCTGCAGCTCAACCGCGTCTCGCTGGA...AATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTCCAGCGAGACGCGGTaGAGCTGCAGGGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLASSETR*SCRDSS
Trigger: GGAGCTGTCCCTGCAGCTCAACCGCGTCTCGCTGGA...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGTCGCAAGCGCCGTTTTaGGCGCCTGAGTCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGSQAPF*APESGR
Trigger: TCTGCCAGACTCAGGCGCCAAAAACGGCGCTTGCGA...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp TTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCGACAGCTCCAGGGCCTaGTTCACGGCCTCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: FGRQSGPCRSIGLKRKVSDSSRA*FTASSR
Trigger: CCGGGACGAGGCCGTGAACAAGGCCCTGGAGCTGTC...GCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGACAGCTCCAGGGCCTaGTTCACGGCCTCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GISFFWKTIWALSLHWPEDSSRA*FTASSR
Trigger: CCGGGACGAGGCCGTGAACAAGGCCCTGGAGCTGTC...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGCAGCGAGATCTCATCTaGCAGCTTGGCCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGQRDLI*QLGHFH
Trigger: GTGGAAGTGGCCAAGCTGCAAGATGAGATCTCGCTG...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp TCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGGACAGCTCCAGGGCCTaGTTCACGGCCTCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: SFGRQSGPCRSIGLKRKVDSSRA*FTASSR
Trigger: CCGGGACGAGGCCGTGAACAAGGCCCTGGAGCTGTC...CACTTTCCTCTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGTCCAGCGAGACGCGGTaGAGCTGCAGGGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKSSETR*SCRDSS
Trigger: GGAGCTGTCCCTGCAGCTCAACCGCGTCTCGCTGGA...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GCCCTGTCGCTCCATTGGCCTGAAGAGGAAAGTGAGCCCCTAAGTGGGCAAGGGGGCTCTGCTGATGCCTaGTGGCCTGGACACAATATC +
Preference number: 5 (lower is better)
Translates to: ALSLHWPEEESEPLSGQGGSADA*WPGHNI
Trigger: GATATTGTGTCCAGGCCACAAGGCATCAGCAGAGCC...CCCTTGCCCACTTAGGGGCTCACTTTCCTCTTCAGGCCAATGGAGCGACAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CAA 90 bp AGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGTCGCAAGCGCCGTTTTaGGCGCCTGAGTCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: RASASFGRQSGPCRSIGLSQAPF*APESGR
Trigger: TCTGCCAGACTCAGGCGCCAAAAACGGCGCTTGCGA...CAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GGCGGGGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATAAGCCTAAGGGGGCCTaGTGTCCAAGACAGACACAA +
Preference number: 5 (lower is better)
Translates to: GGEGISFFWKTIWALSLHKPKGA*CPRQTQ
Trigger: TTGTGTCTGTCTTGGACACAAGGCCCCCTTAGGCTT...ATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CAA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGCAGCGAGATCTCATCTaGCAGCTTGGCCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKQRDLI*QLGHFH
Trigger: GTGGAAGTGGCCAAGCTGCAAGATGAGATCTCGCTG...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS TCA 90 bp AAGTGCAAAGTTCCTGAGGGAACAAGCGTGAGTTCTTGGAGGAAATaGAAAGAGCCCTCATTGTCGGGGAGAGGGTGGTTCGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: KCKVPEGTSVSSWRK*KEPSLSGRGWFGCP
Trigger: AGGGCAGCCGAACCACCCTCTCCCCGACAATGAGGGCTCTTTTCATTTCCTCCAAGAACTCACGCTTGTTCCCTCAGGAACTTTGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS CCA 90 bp CACACTGCTATCAATCCTCCCACATTTCCTGAGCTCCACTTGTTCTaGGGTCTGCTGTCAGTGGCACGTGAGACCACCAAGTTCACTGCT +
Preference number: 5 (lower is better)
Translates to: HTAINPPTFPELHLF*GLLSVARETTKFTA
Trigger: AGCAGTGAACTTGGTGGTCTCACGTGCCACTGACAGCAGACCCCAGAACAAGTGGAGCTCAGGAAATGTGGGAGGATTGATAGCAGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CAA 90 bp GCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGGGGCATCAGCTTCTTTaGGAAGACAATCTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: ASASFGRQSGPCRSIGLKGHQLL*EDNLGP
Trigger: AGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCC...CTTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAAGGGCATCAGCTTCTTTaGGAAGACAATCTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: GISFFWKTIWALSLHWPEGHQLL*EDNLGP
Trigger: AGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCC...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCAGCTCCCGATGAGCCCTaGCCCAGCATCCTGGGGCGG +
Preference number: 5 (lower is better)
Translates to: GVIYILLCPILIHKYPAPAPDEP*PSILGR
Trigger: CCGCCCCAGGATGCTGGGCAAGGGCTCATCGGGAGC...TGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp GGAGGGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCAACAAGCGTGAGTTCTaGGAGGAAATGAAAAGAGCC +
Preference number: 5 (lower is better)
Translates to: GGHQLLLEDNLGPVAPLANKREF*EEMKRA
Trigger: GGCTCTTTTCATTTCCTCCAAGAACTCACGCTTGTT...GGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CAA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTACGCTCCAGAAGCATCTaGCCGAGCTCCGCGGCCAAC +
Preference number: 5 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLRSRSI*PSSAAN
Trigger: GTTGGCCGCGGAGCTCGGCAAGATGCTTCTGGAGCG...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572449.6
ENST00000642419.1
CDS-3UTR CAA 90 bp GGCATCAGCTTCTTTTGGAAGACAATCTGGGCCCTGTCGCTCCATTGGCCTGAATCTGATTTGCAGTTTTaGAAAGTCCTGGGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: GISFFWKTIWALSLHWPESDLQF*KVLGCP
Trigger: GGGACAGCCCAGGACTTTCAAAAACTGCAAATCAGA...TTCAGGCCAATGGAGCGACAGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS GCA 90 bp AAAGCAGGGATGCCAACTCAGGCAGCAGAACTCTTAACCGAATACTaGAGAGGCAACACAGCTTCAGGATTAAGCTGTCAGGTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: KAGMPTQAAELLTEY*RGNTASGLSCQVQG
Trigger: ACCTTGAACCTGACAGCTTAATCCTGAAGCTGTGTTGCCTCTGCAGTATTCGGTTAAGAGTTCTGCTGCCTGAGTTGGCATCCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CAA 90 bp TTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCGCTCCAGAAGCATCTaGCCGAGCTCCGCGGCCAAC +
Preference number: 5 (lower is better)
Translates to: FLSMNGGQIGGVIYILLCRSRSI*PSSAAN
Trigger: GTTGGCCGCGGAGCTCGGCAAGATGCTTCTGGAGCG...ACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572449.6
ENST00000642419.1
CDS-3UTR CAA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGACAGCTCCAGGGCCTaGTTCACGGCCTCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: IGGVIYILLCPILIHKYPDSSRA*FTASSR
Trigger: CCGGGACGAGGCCGTGAACAAGGCCCTGGAGCTGTC...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGTTCGGCTGCCCTTCTaGGAGGAGGGGAGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: IGGVIYILLCPILIHKYPVRLPF*EEGRKG
Trigger: CCCCTTTCTCCCCTCCTCCAAGAAGGGCAGCCGAAC...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CAA 90 bp ATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATCCCTGCAGCGAGATCTCATCTaGCAGCTTGGCCACTTCCAC +
Preference number: 5 (lower is better)
Translates to: IYILLCPILIHKYPAPSLQRDLI*QLGHFH
Trigger: GTGGAAGTGGCCAAGCTGCAAGATGAGATCTCGCTG...CAGGGATGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp TTTTACCATGCTCTTTCTTTCTATGAATGGGGGCCAAATCGGTGGAGTGATTTAGGGCATCAGCTTCTTTaGGAAGACAATCTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: FYHALSFYEWGPNRWSDLGHQLL*EDNLGP
Trigger: AGGGCCCAGATTGTCTTCCAAAAGAAGCTGATGCCC...TAAATCACTCCACCGATTTGGCCCCCATTCATAGAAAGAAAGAGCATGGTAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp TGGGGGCCAAATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATTACTCTGTCCGATCTaGATACATAAATACCCAGCC +
Preference number: 5 (lower is better)
Translates to: WGPNRWSDLYITLSDLDTLLCPI*IHKYPA
Trigger: GGCTGGGTATTTATGTATCAAGATCGGACAGAGTAA...TGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGATTTGGCCCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCATTTCCTGAGCTCCACTaGTTCTGGGGTCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: IGGVIYILLCPILIHKYPFPELH*FWGLLS
Trigger: TGACAGCAGACCCCAGAACAAGTGGAGCTCAGGAAA...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS-3UTR CAA 90 bp GGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCAGCCCCATTACTCTGTCCGATCTaGATACATAAATACCCAGCC +
Preference number: 5 (lower is better)
Translates to: GVIYILLCPILIHKYPAPLLCPI*IHKYPA
Trigger: GGCTGGGTATTTATGTATCAAGATCGGACAGAGTAA...TGGGGCTGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS-3UTR CAA 90 bp ATCGGTGGAGTGATTTATATATTACTCTGTCCGATCTTGATACATAAATACCCATTACTCTGTCCGATCTaGATACATAAATACCCAGCC +
Preference number: 5 (lower is better)
Translates to: IGGVIYILLCPILIHKYPLLCPI*IHKYPA
Trigger: GGCTGGGTATTTATGTATCAAGATCGGACAGAGTAA...TGGGTATTTATGTATCAAGATCGGACAGAGTAATATATAAATCACTCCACCGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS GCA 72 bp CTCCACGGCCCGGGCCTCCCACTCGGCTCCTCGGGCTaGCAGGCCTCGCCGGAGCTCATGGTTCTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: LHGPGLPLGSSG*QASPELMVLLL
Trigger: CAGCAGGAGAACCATGAGCTCCGGCGAGGCCTGGCAGCCCGAGGAGCCGAGTGGGAGGCCCGGGCCGTGGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000576826.1
ENST00000642419.1
CDS CCA 72 bp GTCGGGGTGTCTCCGGGTGCGTCGGCGCCCTGGCCCTaGTCGCCGTCGTCGAGGCTGTGGGCCAGTTCTGAC +
Preference number: 6 (lower is better)
Translates to: VGVSPGASAPWP*SPSSRLWASSD
Trigger: GTCAGAACTGGCCCACAGCCTCGACGACGGCGACCAGGGCCAGGGCGCCGACGCACCCGGAGACACCCCGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS CCA 72 bp TCGGCTCCTCGGGCTGCCAGGCCTCGCCGGAGCTCATaGTTCTCCTGCTGGAGCCGCTGTGGGGGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: SAPRAARPRRSS*FSCWSRCGGQG
Trigger: GCCCTGGCCCCCACAGCGGCTCCAGCAGGAGAACCATGAGCTCCGGCGAGGCCTGGCAGCCCGAGGAGCCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572240.5
ENST00000573514.5
CDS GCA 72 bp CTGAGGGCCCGTGCCCGTTCTCGCCCACTGTCCTGCTaGTCTGAGCGCTGCTCCCCAAGCTGGGCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: LRARARSRPLSC*SERCSPSWARR
Trigger: CCTGCGGGCCCAGCTTGGGGAGCAGCGCTCAGAGCAGCAGGACAGTGGGCGAGAACGGGCACGGGCCCTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000576826.1
ENST00000642419.1
CDS CCA 72 bp GCTCCAGCACAAAGGGGAAGAAGCCCTCGTCGCCGCTaGGAGAGGCGCCCCCTGAGAGCGGCCCGGACGGGA +
Preference number: 6 (lower is better)
Translates to: APAQRGRSPRRR*ERRPLRAARTG
Trigger: TCCCGTCCGGGCCGCTCTCAGGGGGCGCCTCTCCCAGCGGCGACGAGGGCTTCTTCCCCTTTGTGCTGGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000576826.1
ENST00000642419.1
CDS TCA 72 bp CAACGAGGCAGCCGACACGTCGGCGTCCTGGAGGCGTaGCTCCTCCTCCAGCTCGGAGACGCGCCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: QRGSRHVGVLEA*LLLQLGDAPLQ
Trigger: CTGCAGCGGCGCGTCTCCGAGCTGGAGGAGGAGTCACGCCTCCAGGACGCCGACGTGTCGGCTGCCTCGTTG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS CCA 72 bp TCGGCGCCCTGGCCCTGGTCGCCGTCGTCGAGGCTGTaGGCCAGTTCTGACTGCAACGAGGCAGCCGACACG +
Preference number: 6 (lower is better)
Translates to: SAPWPWSPSSRL*ASSDCNEAADT
Trigger: CGTGTCGGCTGCCTCGTTGCAGTCAGAACTGGCCCACAGCCTCGACGACGGCGACCAGGGCCAGGGCGCCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS CCA 72 bp TGCCAGGCCTCCAGCTCCTGCGTGAGCGCCACCTTCTaGCGGATGGCGCGCAGCAGCTCCCGAGACAGGGAG +
Preference number: 6 (lower is better)
Translates to: CQASSSCVSATF*RMARSSSRDRE
Trigger: CTCCCTGTCTCGGGAGCTGCTGCGCGCCATCCGCCAGAAGGTGGCGCTCACGCAGGAGCTGGAGGCCTGGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS GCA 72 bp CGGCCCATGGCAGCACACACTTCCTCACGCTCCAAGTaGTGGGCGCTCAGCGTCTCCAGCTGCCGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: RPMAAHTSSRSK*WALSVSSCRRS
Trigger: GCTGCGGCGGCAGCTGGAGACGCTGAGCGCCCAGCACTTGGAGCGTGAGGAAGTGTGTGCTGCCATGGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642419.1
CDS TCA 72 bp CGACGACGCGGAGGCGCTCAGCTCCTTCTGGCGCTGTaGGCGCAGCTGCTGCCCGATCACCACCTGCATGTC +
Preference number: 6 (lower is better)
Translates to: RRRGGAQLLLAL*AQLLPDHHLHV
Trigger: GACATGCAGGTGGTGATCGGGCAGCAGCTGCGCTCACAGCGCCAGAAGGAGCTGAGCGCCTCCGCGTCGTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS GCA 72 bp TGGTTCTCCTGCTGGAGCCGTTCCTCACGCTCCAAGTaGTGGGCGCTCAGCGTCTCCAGCTGCCGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: WFSCWSRSSRSK*WALSVSSCRRS
Trigger: GCTGCGGCGGCAGCTGGAGACGCTGAGCGCCCAGCACTTGGAGCGTGAGGAACGGCTCCAGCAGGAGAACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000576826.1
CDS GCA 72 bp TTCCCCCTGCAGACTCTCCAGCCGCGTCCTCAGCTCTaGTCCAGCCAGTGCCTGAGCCTGGCACTGTCCCCG +
Preference number: 6 (lower is better)
Translates to: FPLQTLQPRPQL*SSQCLSLALSP
Trigger: CGGGGACAGTGCCAGGCTCAGGCACTGGCTGGAGCAGAGCTGAGGACGCGGCTGGAGAGTCTGCAGGGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000576826.1
ENST00000642419.1
CDS GCA 72 bp TGGTCGCCGTCGTCGAGGCTGTGGGCCAGTTCTGACTaGAACGAGGCAGCCGACACGTCGGCGTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: WSPSSRLWASSD*NEAADTSASWR
Trigger: CCTCCAGGACGCCGACGTGTCGGCTGCCTCGTTGCAGTCAGAACTGGCCCACAGCCTCGACGACGGCGACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS GCA 72 bp CCAGGGTCTTCCTGCGCCCGCAGCTCCTTCTGCCTCTaGAGCTCTTCCCGCAGGGACTGCAGCTCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: PGSSCARSSFCL*SSSRRDCSSAC
Trigger: GCAGGCAGAGCTGCAGTCCCTGCGGGAAGAGCTGCAGAGGCAGAAGGAGCTGCGGGCGCAGGAAGACCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS GCA 72 bp GCGCTCAGCTCCTTCTGGCGCTGTGAGCGCAGCTGCTaGCCGATCACCACCTGCATGTCGTCCTGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: ALSSFWRCERSC*PITTCMSSCQA
Trigger: GGCCTGGCAGGACGACATGCAGGTGGTGATCGGGCAGCAGCTGCGCTCACAGCGCCAGAAGGAGCTGAGCGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS CCA 72 bp TCTGACTGCAACGAGGCAGCCGACACGTCGGCGTCCTaGAGGCGTGACTCCTCCTCCAGCTCGGAGACGCGC +
Preference number: 6 (lower is better)
Translates to: SDCNEAADTSAS*RRDSSSSSETR
Trigger: GCGCGTCTCCGAGCTGGAGGAGGAGTCACGCCTCCAGGACGCCGACGTGTCGGCTGCCTCGTTGCAGTCAGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS TCA 72 bp TGGAGCCGCTCCAGCTGCTGCCGGGGCTTCTGGACCTaGGGTCGCAAGCGCCGTTTTTGGCGCCTGAGTCTG +
Preference number: 6 (lower is better)
Translates to: WSRSSCCRGFWT*GRKRRFWRLSL
Trigger: CAGACTCAGGCGCCAAAAACGGCGCTTGCGACCTCAGGTCCAGAAGCCCCGGCAGCAGCTGGAGCGGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642419.1
CDS GCA 72 bp GAGGCGCTCAGCTCCTTCTGGCGCTGTGAGCGCAGCTaGTGCCCGATCACCACCTGCATGTCGTCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: EALSSFWRCERS*CPITTCMSSCQ
Trigger: CTGGCAGGACGACATGCAGGTGGTGATCGGGCAGCAGCTGCGCTCACAGCGCCAGAAGGAGCTGAGCGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS GCA 72 bp GCAGAGTTCAAGCCCCGGCCCATGGCAGCACACACCTaGTGTGTCCCAGGGGCTCTGGAGGCCTGGACTCTG +
Preference number: 6 (lower is better)
Translates to: AEFKPRPMAAHT*CVPGALEAWTL
Trigger: CAGAGTCCAGGCCTCCAGAGCCCCTGGGACACAGCAGGTGTGTGCTGCCATGGGCCGGGGCTTGAACTCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572240.5
ENST00000573514.5
CDS CAA 90 bp ACCCCAGCGGCCCAGGCTGTTCCCGTTCCTGGATCGCTGGGCGCCTaGGGCCGTGCACCTCCCTCAGCGGATATATACAGTTTCCTCGCC +
Preference number: 6 (lower is better)
Translates to: TPAAQAVPVPGSLGA*GRAPPSADIYSFLA
Trigger: GGCGAGGAAACTGTATATATCCGCTGAGGGAGGTGCACGGCCCAAGGCGCCCAGCGATCCAGGAACGGGAACAGCCTGGGCCGCTGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572240.5
CDS TCA 72 bp CCACTCACCTCCAGCTGCTGCCGGGGCTTCTGGACCTaGGGTCGCAAGCGCCGTTTTTGGCGCCTGAGTCTG +
Preference number: 6 (lower is better)
Translates to: PLTSSCCRGFWT*GRKRRFWRLSL
Trigger: CAGACTCAGGCGCCAAAAACGGCGCTTGCGACCTCAGGTCCAGAAGCCCCGGCAGCAGCTGGAGGTGAGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572240.5
ENST00000573514.5
CDS CAA 72 bp TCCCGAGACAGGGAGTCTCGCTCCAGCGAGACGCGGTaGAGCTGCAGGGACAGCTCCAGGGCCTTGTTCACG +
Preference number: 6 (lower is better)
Translates to: SRDRESRSSETR*SCRDSSRALFT
Trigger: CGTGAACAAGGCCCTGGAGCTGTCCCTGCAGCTCAACCGCGTCTCGCTGGAGCGAGACTCCCTGTCTCGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS TCA 72 bp TCTGGACCTGAGGTCGCAAGCGCCGTTTTTGGCGCCTaGGTCTGGCAGAGTTCAAGCCCCGGCCCATGGCAG +
Preference number: 6 (lower is better)
Translates to: SGPEVASAVFGA*VWQSSSPGPWQ
Trigger: CTGCCATGGGCCGGGGCTTGAACTCTGCCAGACTCAGGCGCCAAAAACGGCGCTTGCGACCTCAGGTCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000572240.5
ENST00000573514.5
ENST00000642419.1
CDS GCA 72 bp AGCTCCGCGGCCAACAGCAGGTCTTTCTCCTTCTGCTaGAGCTGCAAGGCTAGGTCCTCGGGCTCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: SSAANSRSFSFC*SCKARSSGSSG
Trigger: GCCTGAGGAGCCCGAGGACCTAGCCTTGCAGCTGCAGCAGAAGGAGAAAGACCTGCTGTTGGCCGCGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000576826.1
ENST00000642419.1
CDS GCA 72 bp CCGAGCTCCGCGGCCAACAGCAGGTCTTTCTCCTTCTaGTGCAGCTGCAAGGCTAGGTCCTCGGGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: PSSAANSRSFSF*CSCKARSSGSS
Trigger: TGAGGAGCCCGAGGACCTAGCCTTGCAGCTGCAGCAGAAGGAGAAAGACCTGCTGTTGGCCGCGGAGCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000576826.1
ENST00000642419.1
CDS CAA 72 bp GCCCAGGCTGTTCCCGTTCCTGGATCGCTGGGCGCCTaGGGCCGTGCACCTCCCTCAGCGGATATATACAGT +
Preference number: 6 (lower is better)
Translates to: AQAVPVPGSLGA*GRAPPSADIYS
Trigger: ACTGTATATATCCGCTGAGGGAGGTGCACGGCCCAAGGCGCCCAGCGATCCAGGAACGGGAACAGCCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572240.5
CDS GCA 72 bp TCACGCTCCAAGTGCTGGGCGCTCAGCGTCTCCAGCTaGCGCCGCAGCTCTTCATTTCGCTCCAGAAGCATC +
Preference number: 6 (lower is better)
Translates to: SRSKCWALSVSS*RRSSSFRSRSI
Trigger: GATGCTTCTGGAGCGAAATGAAGAGCTGCGGCGGCAGCTGGAGACGCTGAGCGCCCAGCACTTGGAGCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000576826.1
ENST00000642419.1
CDS GCA 72 bp CTGCCTCTGCAGCTCTTCCCGCAGGGACTGCAGCTCTaGCTGCTGCAGCGAGATCTCATCTTGCAGCTTGGC +
Preference number: 6 (lower is better)
Translates to: LPLQLFPQGLQL*LLQRDLILQLG
Trigger: GCCAAGCTGCAAGATGAGATCTCGCTGCAGCAGGCAGAGCTGCAGTCCCTGCGGGAAGAGCTGCAGAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000389347.4
ENST00000572240.5
ENST00000572449.6
ENST00000573514.5
ENST00000642419.1
CDS CCA 72 bp CAGCGTGGGGAGGCAGATGAATCGGGGGTTAACCTCTaGCCCACTCTCTCTAGGCCCTCAAAGCGGGATGGG +
Preference number: 6 (lower is better)
Translates to: QRGEADESGVNL*PTLSRPSKRDG
Trigger: CCCATCCCGCTTTGAGGGCCTAGAGAGAGTGGGCCAGAGGTTAACCCCCGATTCATCTGCCTCCCCACGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572240.5
ENST00000573514.5
CDS CCA 72 bp CCCAGGCTGTTCCCGTTCCTGGATCGCTGGGCGCCTTaGGCCGTGCACCTCCCTCAGCGGATATATACAGTT +
Preference number: 6 (lower is better)
Translates to: PRLFPFLDRWAP*AVHLPQRIYTV
Trigger: AACTGTATATATCCGCTGAGGGAGGTGCACGGCCCAAGGCGCCCAGCGATCCAGGAACGGGAACAGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572240.5
CDS CAA 90 bp GTCTCCAGCTGCCGCCGCAGCTCTTCATTTCGCTCCAGAAGCATCTaGCCGAGCTCCGCGGCCAACAGCAGGTCTTTCTCCTTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VSSCRRSSSFRSRSI*PSSAANSRSFSFCC
Trigger: GCAGCAGAAGGAGAAAGACCTGCTGTTGGCCGCGGAGCTCGGCAAGATGCTTCTGGAGCGAAATGAAGAGCTGCGGCGGCAGCTGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000576826.1
ENST00000642419.1
CDS GCA 72 bp GCCGCCGCAGCTCTTCATTTCGCTCCAGAAGCATCTTaGCGAGCTCCGCGGCCAACAGCAGGTCTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: AAAALHFAPEAS*RAPRPTAGLSP
Trigger: AGGAGAAAGACCTGCTGTTGGCCGCGGAGCTCGGCAAGATGCTTCTGGAGCGAAATGAAGAGCTGCGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000576826.1
ENST00000642419.1
CDS CAA 72 bp TGCCGCCGCAGCTCTTCATTTCGCTCCAGAAGCATCTaGCCGAGCTCCGCGGCCAACAGCAGGTCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: CRRSSSFRSRSI*PSSAANSRSFS
Trigger: GGAGAAAGACCTGCTGTTGGCCGCGGAGCTCGGCAAGATGCTTCTGGAGCGAAATGAAGAGCTGCGGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000389347.4
ENST00000572449.6
ENST00000576826.1
ENST00000642419.1
CDS CAA 72 bp GTGGGGGTGGAGGGTCCTTCAAGGAGGACGTCATGTTaGAGTCGACTTCTGCAGGACAAGAAGAGCCACCAG +
Preference number: 6 (lower is better)
Translates to: VGVEGPSRRTSC*SRLLQDKKSHQ
Trigger: CTGGTGGCTCTTCTTGTCCTGCAGAAGTCGACTCAAACATGACGTCCTCCTTGAAGGACCCTCCACCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS GCA 72 bp CTCCCACATTTCCTGAGCTCCACTTGTTCTGGGGTCTaGTGTCAGTGGCACGTGAGACCACCAAGTTCACTG +
Preference number: 6 (lower is better)
Translates to: LPHFLSSTCSGV*CQWHVRPPSSL
Trigger: CAGTGAACTTGGTGGTCTCACGTGCCACTGACAGCAGACCCCAGAACAAGTGGAGCTCAGGAAATGTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS TCA 72 bp ATCCACCCACACTGCTATCAATCCTCCCACATTTCCTaGGCTCCACTTGTTCTGGGGTCTGCTGTCAGTGGC +
Preference number: 6 (lower is better)
Translates to: IHPHCYQSSHIS*APLVLGSAVSG
Trigger: GCCACTGACAGCAGACCCCAGAACAAGTGGAGCTCAGGAAATGTGGGAGGATTGATAGCAGTGTGGGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS CCA 72 bp TTTCATTTCTTTTTCTCCGTCTCCATTGCGCAGCCGTaGTCTAGGGGCTGTCATTCCTGGCCTGAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: FHFFFSVSIAQP*SRGCHSWPELW
Trigger: CCAGAGCTCAGGCCAGGAATGACAGCCCCTAGACCACGGCTGCGCAATGGAGACGGAGAAAAAGAAATGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572240.5
ENST00000576826.1
CDS GCA 72 bp AATTGCCACAGCTGCTGCAGCGACTCGCAGGTACCCTaGATTAGGGCTCTATCTGCATTGCTTCATTTCATC +
Preference number: 6 (lower is better)
Translates to: NCHSCCSDSQVP*IRALSALLHFI
Trigger: GATGAAATGAAGCAATGCAGATAGAGCCCTAATGCAGGGTACCTGCGAGTCGCTGCAGCAGCTGTGGCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572240.5
ENST00000573514.5
CDS CAA 72 bp AGATTGTCCTGGCTGATGCTCGGCTCTGCTGATGCCTaGTGGCCTGGACACAATATCTCTAAGTCTATCCAC +
Preference number: 6 (lower is better)
Translates to: RLSWLMLGSADA*WPGHNISKSIH
Trigger: GTGGATAGACTTAGAGATATTGTGTCCAGGCCACAAGGCATCAGCAGAGCCGAGCATCAGCCAGGACAATCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS GCA 72 bp ATGCCAACTCAGGCAGCAGAACTCTTAACCGAATACTaGAGAGGCAACACAGCTTCAGGATTAAGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: MPTQAAELLTEY*RGNTASGLSCQ
Trigger: CTGACAGCTTAATCCTGAAGCTGTGTTGCCTCTGCAGTATTCGGTTAAGAGTTCTGCTGCCTGAGTTGGCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573514.5
CDS CAA 72 bp GAAGGAAGGCAAGCTGACCCCAAAGTGCAGACTCCTTaGATCTCTAACATCAGACACCGCATCCTCTTTTCA +
Preference number: 6 (lower is better)
Translates to: EGRQADPKVQTP*ISNIRHRILFS
Trigger: TGAAAAGAGGATGCGGTGTCTGATGTTAGAGATCAAAGGAGTCTGCACTTTGGGGTCAGCTTGCCTTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572240.5
ENST00000576826.1
CDS CAA 90 bp CCGGGATGCGAAGGAAGGCAAGCTGACCCCAAAGTGCAGACTCCTTaGATCTCTAACATCAGACACCGCATCCTCTTTTCATTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: PGCEGRQADPKVQTP*ISNIRHRILFSFLF
Trigger: AAAAAGAAATGAAAAGAGGATGCGGTGTCTGATGTTAGAGATCAAAGGAGTCTGCACTTTGGGGTCAGCTTGCCTTCCTTCGCATCCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572240.5
ENST00000576826.1
CDS TCA 72 bp AAGGAAGGCAAGCTGACCCCAAAGTGCAGACTCCTTTaGTCTCTAACATCAGACACCGCATCCTCTTTTCAT +
Preference number: 6 (lower is better)
Translates to: KEGKLTPKCRLL*SLTSDTASSFH
Trigger: ATGAAAAGAGGATGCGGTGTCTGATGTTAGAGATCAAAGGAGTCTGCACTTTGGGGTCAGCTTGCCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572240.5
ENST00000576826.1
CDS TCA 72 bp GGAACAGCAAGTGCAAAGTTCCTGAGGGAACAAGCGTaGGTTCTTGGAGGAAATGAAAAGAGCCCTCATTGT +
Preference number: 6 (lower is better)
Translates to: GTASAKFLREQA*VLGGNEKSPHC
Trigger: ACAATGAGGGCTCTTTTCATTTCCTCCAAGAACTCACGCTTGTTCCCTCAGGAACTTTGCACTTGCTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573514.5