RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BICD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000185963

Ensembl transcript IDs: ENST00000356884.11, ENST00000375512.3

Found 575 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGGGCAAAGCGCATGCAGGGTGGGCATGCCAGCAGCCATCCCACTaGGAGTCTTGCTGGGGCAGGGGGATCTGGGCCCAGGATGAACAC +
Preference number: 1 (lower is better)
Translates to: EGKAHAGWACQQPSH*ESCWGRGIWAQDEH
Trigger: GTGTTCATCCTGGGCCCAGATCCCCCTGCCCCAGCAAGACTCGCAGTGGGATGGCTGCTGGCATGCCCACCCTGCATGCGCTTTGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 90 bp TGGCCCTGGCCCTATGCAAAGCTTTCCCAGCACCGGGCTGGGCTCTaGATACACCTGTGGGTGTCCAACCCAGCCAAGCCCTTGGTGGCT +
Preference number: 1 (lower is better)
Translates to: WPWPYAKLSQHRAGL*IHLWVSNPAKPLVA
Trigger: AGCCACCAAGGGCTTGGCTGGGTTGGACACCCACAGGTGTATCCAGAGCCCAGCCCGGTGCTGGGAAAGCTTTGCATAGGGCCAGGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 90 bp AGCTATGTGCCAGGCTTGCAAGGAGAGGGCAAAGCGCATGCAGGGTaGGCATGCCAGCAGCCATCCCACTGCGAGTCTTGCTGGGGCAGG +
Preference number: 1 (lower is better)
Translates to: SYVPGLQGEGKAHAG*ACQQPSHCESCWGR
Trigger: CCTGCCCCAGCAAGACTCGCAGTGGGATGGCTGCTGGCATGCCCACCCTGCATGCGCTTTGCCCTCTCCTTGCAAGCCTGGCACATAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR TCA 90 bp GTTAAGATTGACCTAGCACCGCCGTCCCGCTGCTGCTGGGTTAGTTaGGGTGAAGCAGATGTTAGCTGCAGCGTGCGGCGCCCCACAGCC +
Preference number: 1 (lower is better)
Translates to: VKIDLAPPSRCCWVS*GEADVSCSVRRPTA
Trigger: GGCTGTGGGGCGCCGCACGCTGCAGCTAACATCTGCTTCACCTCAACTAACCCAGCAGCAGCGGGACGGCGGTGCTAGGTCAATCTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 90 bp GGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGGGCAAAGCGCATaGAGGGTGGGCATGCCAGCAGCCATCCCACTGCGAGTCTTGCTG +
Preference number: 1 (lower is better)
Translates to: GEKLCARLARRGQSA*RVGMPAAIPLRVLL
Trigger: CAGCAAGACTCGCAGTGGGATGGCTGCTGGCATGCCCACCCTGCATGCGCTTTGCCCTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 90 bp CTGATGCAACGCCCCATGGCGCCTCGGCTAGACTCCTACCCTCTGTaGATTAGTCACGTTAAGATTGACCTAGCACCGCCGTCCCGCTGC +
Preference number: 1 (lower is better)
Translates to: LMQRPMAPRLDSYPL*ISHVKIDLAPPSRC
Trigger: GCAGCGGGACGGCGGTGCTAGGTCAATCTTAACGTGACTAATGCACAGAGGGTAGGAGTCTAGCCGAGGCGCCATGGGGCGTTGCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 90 bp TATGCAAAGCTTTCCCAGCACCGGGCTGGGCTCTGGATACACCTGTaGGTGTCCAACCCAGCCAAGCCCTTGGTGGCTCAGACTTCAGGC +
Preference number: 1 (lower is better)
Translates to: YAKLSQHRAGLWIHL*VSNPAKPLVAQTSG
Trigger: GCCTGAAGTCTGAGCCACCAAGGGCTTGGCTGGGTTGGACACCCACAGGTGTATCCAGAGCCCAGCCCGGTGCTGGGAAAGCTTTGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 90 bp TCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTaGAGTCTGGAGGGGACCGAAACATACTCGGCACCAAAGGGAAGA +
Preference number: 1 (lower is better)
Translates to: SGPRMNTQGTYMGVS*SLEGTETYSAPKGR
Trigger: TCTTCCCTTTGGTGCCGAGTATGTTTCGGTCCCCTCCAGACTCCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 90 bp CTGAGGGAGCAGGACCAGGACTCCTCCCTTGGGTTTCCCCACGGGTaGGCAGGGCTTAGAAGATGCTTTCATCACACATCTGCTGCAAGA +
Preference number: 1 (lower is better)
Translates to: LREQDQDSSLGFPHG*AGLRRCFHHTSAAR
Trigger: TCTTGCAGCAGATGTGTGATGAAAGCATCTTCTAAGCCCTGCGCACCCGTGGGGAAACCCAAGGGAGGAGTCCTGGTCCTGCTCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 90 bp CTGCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTaGAAGGAGAGGGCAAAGCGCATGCAGGGTGGGCATGCCAGCAGC +
Preference number: 1 (lower is better)
Translates to: LQSPLGVWREAMCQA*KERAKRMQGGHASS
Trigger: GCTGCTGGCATGCCCACCCTGCATGCGCTTTGCCCTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 90 bp CACATGCGAGGAACATGCAAGTCTCAACTCAGGTTCTGCCCCTTTTaGGTGCTGAGGGAGCAGGACCAGGACTCCTCCCTTGGGTTTCCC +
Preference number: 1 (lower is better)
Translates to: HMRGTCKSQLRFCPF*VLREQDQDSSLGFP
Trigger: GGGAAACCCAAGGGAGGAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGACTTGCATGTTCCTCGCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 90 bp CAGGGGTCCCAGTGGCTTGGGTGTCTGCAAAGTCCCTTAGGAGTATaGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGGGCAAAGCGC +
Preference number: 1 (lower is better)
Translates to: QGSQWLGCLQSPLGV*REAMCQACKERAKR
Trigger: GCGCTTTGCCCTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGCAGACACCCAAGCCACTGGGACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR TCA 90 bp TCATCACACATCTGCTGCAAGAATGTGCAGCTCTATCCCCACCTCTaGCCCCCACCTAAGAGAGCAGCTGAGGACTGGGTGCTCCTGAGG +
Preference number: 1 (lower is better)
Translates to: SSHICCKNVQLYPHL*PPPKRAAEDWVLLR
Trigger: CCTCAGGAGCACCCAGTCCTCAGCTGCTCTCTTAGGTGGGGGTCAGAGGTGGGGATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR TCA 90 bp AACCCTCATCCCCTACTGCGCATGCCAACACAGCGTCGGCCCTCCTaGTACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCT +
Preference number: 1 (lower is better)
Translates to: NPHPLLRMPTQRRPS*YPQLFTNVAFIQLA
Trigger: AGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTGTTGGCATGCGCAGTAGGGGATGAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR CCA 90 bp GGCTCTGGATACACCTGTGGGTGTCCAACCCAGCCAAGCCCTTGGTaGCTCAGACTTCAGGCTAGGGTTTTCAAAGCCCCATGTCTTTGG +
Preference number: 1 (lower is better)
Translates to: GSGYTCGCPTQPSPW*LRLQARVFKAPCLW
Trigger: CCAAAGACATGGGGCTTTGAAAACCCTAGCCTGAAGTCTGAGCCACCAAGGGCTTGGCTGGGTTGGACACCCACAGGTGTATCCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 90 bp CTGGGCTCTGGATACACCTGTGGGTGTCCAACCCAGCCAAGCCCTTaGTGGCTCAGACTTCAGGCTAGGGTTTTCAAAGCCCCATGTCTT +
Preference number: 1 (lower is better)
Translates to: LGSGYTCGCPTQPSP*WLRLQARVFKAPCL
Trigger: AAGACATGGGGCTTTGAAAACCCTAGCCTGAAGTCTGAGCCACCAAGGGCTTGGCTGGGTTGGACACCCACAGGTGTATCCAGAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 90 bp CTTGGGTGTCTGCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTaGCAGGCTTGCAAGGAGAGGGCAAAGCGCATGCAGGGTGGGCAT +
Preference number: 1 (lower is better)
Translates to: LGCLQSPLGVWREAM*QACKERAKRMQGGH
Trigger: ATGCCCACCCTGCATGCGCTTTGCCCTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGCAGACACCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 90 bp GACATTAGACACATGCGAGGAACATGCAAGTCTCAACTCAGGTTCTaGCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGACTCCTCCCTT +
Preference number: 1 (lower is better)
Translates to: DIRHMRGTCKSQLRF*PFWVLREQDQDSSL
Trigger: AAGGGAGGAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGACTTGCATGTTCCTCGCATGTGTCTAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 90 bp CAACACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTaGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTG +
Preference number: 1 (lower is better)
Translates to: QHSVGPPDTLSSSQT*RSYSLLSLSQKVHL
Trigger: CAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR GCA 90 bp GCAGGGCTTAGAAGATGCTTTCATCACACATCTGCTGCAAGAATGTaGAGCTCTATCCCCACCTCTGACCCCCACCTAAGAGAGCAGCTG +
Preference number: 1 (lower is better)
Translates to: AGLRRCFHHTSAARM*SSIPTSDPHLREQL
Trigger: CAGCTGCTCTCTTAGGTGGGGGTCAGAGGTGGGGATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAGCATCTTCTAAGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 90 bp GGCAGAAGAGAAGACCTGCATGTGTTAGCAGGGGTCCCAGTGGCTTaGGTGTCTGCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTG +
Preference number: 1 (lower is better)
Translates to: GRREDLHVLAGVPVA*VSAKSLRSMERSYV
Trigger: CACATAGCTTCTCTCCATACTCCTAAGGGACTTTGCAGACACCCAAGCCACTGGGACCCCTGCTAACACATGCAGGTCTTCTCTTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 90 bp CATTTGCAAAGAATACTATGGCTAACCCTCATCCCCTACTGCGCATaGCAACACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAA +
Preference number: 1 (lower is better)
Translates to: HLQRILWLTLIPYCA*QHSVGPPDTLSSSQ
Trigger: TTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTGTTGGCATGCGCAGTAGGGGATGAGGGTTAGCCATAGTATTCTTTGCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR GCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTaGTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACT +
Preference number: 1 (lower is better)
Translates to: LLIPSALHKRGVHTA*SACPRRSIWFPKHT
Trigger: AGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR CCA 90 bp AAAAGTACTGAGAAAAGTTCTGCTCAGAATGTGGGAAGGCAGGTGTaGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCC +
Preference number: 1 (lower is better)
Translates to: KSTEKSSAQNVGRQV*MEPLEMGEPYSYLS
Trigger: GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCTTCCCACATTCTGAGCAGAACTTTTCTCAGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 90 bp GTCAGATACTGCATAAACTACAACGTACTCCTTTCCATGAAACTATaGCAAGTGCAAAGCCATCCTCTGAGGTCGTACCTATGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: VRYCINYNVLLSMKL*QVQSHPLRSYLCCR
Trigger: CCTGCAGCATAGGTACGACCTCAGAGGATGGCTTTGCACTTGGCATAGTTTCATGGAAAGGAGTACGTTGTAGTTTATGCAGTATCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 90 bp AAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATaGCTAACCCTCATCCCCTACTGCGCATGCCAACACAGCGTCGGC +
Preference number: 1 (lower is better)
Translates to: KRRYNVSLSHLQRIL*LTLIPYCACQHSVG
Trigger: GCCGACGCTGTGTTGGCATGCGCAGTAGGGGATGAGGGTTAGCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR GCA 90 bp CTGGGCTTGGGGAAGAAATTCTGCACTTCTTTCCTGAATATGATTTaGAGTCAGATACTGCATAAACTACAACGTACTCCTTTCCATGAA +
Preference number: 1 (lower is better)
Translates to: LGLGKKFCTSFLNMI*SQILHKLQRTPFHE
Trigger: TTCATGGAAAGGAGTACGTTGTAGTTTATGCAGTATCTGACTGCAAATCATATTCAGGAAAGAAGTGCAGAATTTCTTCCCCAAGCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACTGCAGGAGAGAAGACTaGAGCCTCAGGTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNCRRED*SLRSSW
Trigger: CCAGCTGGACCTGAGGCTGCAGTCTTCTCTCCTGCA...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGAGGTTCTGCCCCTTTTaGGTGCTGAGGGAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWRFCPF*VLREQD
Trigger: GTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCT...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACTGTGACAGGGCCGGGTaGCCAAGTCCTCCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYCDRAG*PSPPGS
Trigger: GCTGCCAGGAGGACTTGGCCACCCGGCCCTGTCACA...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR TCA 90 bp GTCTCAACTCAGGTTCTGCCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGACTCTCACAAGTGTCCTGCTaGTGCAACGCCCCATGGCGC +
Preference number: 2 (lower is better)
Translates to: VSTQVLPLLGAEGAGPGLSQVSC*CNAPWR
Trigger: GCGCCATGGGGCGTTGCATCAGCAGGACACTTGTGA...GAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACTCTCAACTCAGGTTCTaGCCCTTTTGGGTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNSQLRF*PFWVLR
Trigger: CCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGA...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGCAAAAGGACGGGCTCTaGACTAAGGACCAAGGTCTG +
Preference number: 2 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWQKDGL*TKDQGL
Trigger: CAGACCTTGGTCCTTAGTGCAGAGCCCGTCCTTTTG...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACCACCGGGCTGGGCTCTaGATACACCTGTGGGTGTCC +
Preference number: 2 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYHRAGL*IHLWVS
Trigger: GGACACCCACAGGTGTATCCAGAGCCCAGCCCGGTG...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACTGGGGCAGGGGGATCTaGGCCCAGGATGAACACGCA +
Preference number: 2 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYWGRGI*AQDEHA
Trigger: TGCGTGTTCATCCTGGGCCCAGATCCCCCTGCCCCA...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR TCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGAACATCTCCTACCTGTaGATCCTGACAAGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWNISYL*ILTSGP
Trigger: AGGGCCACTTGTCAGGATTCACAGGTAGGAGATGTT...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR TCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACATAGACCACGGCACCTaGGACCGTCTCTACGCGAGG +
Preference number: 2 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYIDHGT*DRLYAR
Trigger: CCTCGCGTAGAGACGGTCTCAGGTGCCGTGGTCTAT...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR GCA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACAGGTCGTACCTATGCTaGAGGCTGGAACCTCCTAAA +
Preference number: 2 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNRSYLC*RLEPPK
Trigger: TTTAGGAGGTTCCAGCCTGCAGCATAGGTACGACCT...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp AAGTGGCCCTGGCCCTATGCAAAGCTTTCCCAGCACCGGGCTGGGCTCTGGATATGTGCCATGTGTGTCTaGCCAGCAGAATACAGGGGC +
Preference number: 2 (lower is better)
Translates to: KWPWPYAKLSQHRAGLWICAMCV*PAEYRG
Trigger: GCCCCTGTATTCTGCTGGCCAGACACACATGGCACA...TATCCAGAGCCCAGCCCGGTGCTGGGAAAGCTTTGCATAGGGCCAGGGCCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp ACTCGAATGCCTCTTCCGCATGAGAGACAAGGCAAGCAGCCTGCAGGAGAGAAGAGAGCAGCTGAGGACTaGGTGCTCCTGAGGGGGCTT +
Preference number: 2 (lower is better)
Translates to: TRMPLPHERQGKQPAGEKRAAED*VLLRGL
Trigger: AAGCCCCCTCAGGAGCACCCAGTCCTCAGCTGCTCT...CTTCTCTCCTGCAGGCTGCTTGCCTTGTCTCTCATGCGGAAGAGGCATTCGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTCCAGGACTCCTCCCTTaGGTTTCCCCACGGGTGCGC +
Preference number: 2 (lower is better)
Translates to: LLIPSALHKRGVHTACSAPGLLP*VSPRVR
Trigger: GCGCACCCGTGGGGAAACCCAAGGGAGGAGTCCTGG...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CAA 90 bp ACACATGCGAGGAACATGCAAGTCTCAACTCAGGTTCTGCCCCTTTaGGGTGCTGAGGGAGCAGGACCAGGACTCCTCCCTTGGGTTTCC +
Preference number: 2 (lower is better)
Translates to: THARNMQVSTQVLPL*GAEGAGPGLLPWVS
Trigger: GGAAACCCAAGGGAGGAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGACTTGCATGTTCCTCGCATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CAA 90 bp TCTGCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTaGCAAGGAGAGGGCAAAGCGCATGCAGGGTGGGCATGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: SAKSLRSMERSYVPG*QGEGKAHAGWACQQ
Trigger: CTGCTGGCATGCCCACCCTGCATGCGCTTTGCCCTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGAAGCAGATGTTAGCTaGAGCGTGCGGCGCCCCACA +
Preference number: 2 (lower is better)
Translates to: ALLIPSALHKRGVHTACSEADVS*SVRRPT
Trigger: TGTGGGGCGCCGCACGCTGCAGCTAACATCTGCTTC...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCGGAAGGCCGGATAATTaGCTGCTGGGGTCACCCCAA +
Preference number: 2 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSGRPDN*LLGSPQ
Trigger: TTGGGGTGACCCCAGCAGCCAATTATCCGGCCTTCC...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CAA 90 bp CCACGCTGGCCTTCAGCATGCCCACTAGCTCTTCCCTGCTCGCTTTaGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGC +
Preference number: 2 (lower is better)
Translates to: PRWPSACPLALPCSL*RMICAGTPPLTDEG
Trigger: GCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGAGCAGGGAAGAGCTAGTGGGCATGCTGAAGGCCAGCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR TCA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCACTCTATCCCCACCTCTaGCCCCCACCTAAGAGAGCA +
Preference number: 2 (lower is better)
Translates to: RGVHTACSACPRRSIWFPLYPHL*PPPKRA
Trigger: TGCTCTCTTAGGTGGGGGTCAGAGGTGGGGATAGAG...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGGGGTTTCCCCACGGGTaGGCAGGGCTTAGAAGATGC +
Preference number: 2 (lower is better)
Translates to: AKSLRSMERSYVPGLQGEGFPHG*AGLRRC
Trigger: GCATCTTCTAAGCCCTGCGCACCCGTGGGGAAACCC...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTTGTGACAGGGCCGGGTaGCCAAGTCCTCCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCCDRAG*PSPPGS
Trigger: GCTGCCAGGAGGACTTGGCCACCCGGCCCTGTCACA...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR GCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTTTGAAGCTCTCCACGTaGTGGGAGGGCGCGAGCACG +
Preference number: 2 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCLKLST*WEGAST
Trigger: CGTGCTCGCGCCCTCCCAGCACGTGGAGAGCTTCAA...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGTGGGCTTTTAGGTTaGCCTTCCTTCCTCCTTGTG +
Preference number: 2 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYSGLLG*PSFLLV
Trigger: CACAAGGAGGAAGGAAGGGCAACCTAAAAGCCCACT...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR GCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTTGGGGCCTTGGGCCCTaGCAATCTGTCACCTCACAG +
Preference number: 2 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFWGLGP*QSVTSQ
Trigger: CTGTGAGGTGACAGATTGGCAGGGCCCAAGGCCCCA...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CAA 90 bp CCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTaGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACAC +
Preference number: 2 (lower is better)
Translates to: PPDTLSSSQTWRSYS*LSLSQKVHLVPKAH
Trigger: GTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR TCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTCCATGTCTTTGGGACTaGACCCCCTATGGAAGGCCG +
Preference number: 2 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCPCLWD*TPYGRP
Trigger: CGGCCTTCCATAGGGGGTTCAGTCCCAAAGACATGG...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR TCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTCCTACCTGTGAATCCTaGCAAGTGGCCCTGGCCCTA +
Preference number: 2 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCPTCES*QVALAL
Trigger: TAGGGCCAGGGCCACTTGTCAGGATTCACAGGTAGG...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR TCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTAGCTCTGCCTCGTGCTaGCACCAGACAAACACGGTG +
Preference number: 2 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCSSASC*HQTNTV
Trigger: CACCGTGTTTGTCTGGTGTCAGCACGAGGCAGAGCT...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR GCA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCATCTGCTGCAAGAATGTaGAGCTCTATCCCCACCTCT +
Preference number: 2 (lower is better)
Translates to: RGVHTACSACPRRSIWFPSAARM*SSIPTS
Trigger: AGAGGTGGGGATAGAGCTGCACATTCTTGCAGCAGA...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGCTAAGGACCAAGGTCTaGCCAGGCACTTGGAAAGCT +
Preference number: 2 (lower is better)
Translates to: AKSLRSMERSYVPGLQGELRTKV*PGTWKA
Trigger: AGCTTTCCAAGTGCCTGGCCAGACCTTGGTCCTTAG...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCACGGATAATTGGCTGCTaGGGTCACCCCAAGTACAAA +
Preference number: 2 (lower is better)
Translates to: RGVHTACSACPRRSIWFPRIIGC*GHPKYK
Trigger: TTTGTACTTGGGGTGACCCCAGCAGCCAATTATCCG...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGTGGAGCCTCTGGAAATaGGAGAACCCTACAGCTACC +
Preference number: 2 (lower is better)
Translates to: AKSLRSMERSYVPGLQGEWSLWK*ENPTAT
Trigger: GGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCA...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCATGTGGATGGAGCCTCTaGAAATGGGAGAACCCTACA +
Preference number: 2 (lower is better)
Translates to: ALLIPSALHKRGVHTACSCGWSL*KWENPT
Trigger: TGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACA...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR TCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTAATGCCTCTTCCGCATaGGAGACAAGGCAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCNASSA*ETRQAA
Trigger: GGCTGCTTGCCTTGTCTCTCATGCGGAAGAGGCATT...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR TCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGGAAGGGGCTGCAGTGTaGCAGGGCCGGGTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQEGAAV*QGRVAK
Trigger: CTTGGCCACCCGGCCCTGTCACACTGCAGCCCCTTC...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR GCA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCCTGACATTAGACACATaGGAGGAACATGCAAGTCTC +
Preference number: 2 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSLTLDT*EEHASL
Trigger: GAGACTTGCATGTTCCTCGCATGTGTCTAATGTCAG...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CAA 90 bp ACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTaGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTT +
Preference number: 2 (lower is better)
Translates to: TLSSSQTWRSYSLLS*SQKVHLVPKAHSRF
Trigger: AAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR TCA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTTGCAAAGCCATCCTCTaGGGTCGTACCTATGCTGCA +
Preference number: 2 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTCKAIL*GRTYAA
Trigger: TGCAGCATAGGTACGACCTCAGAGGATGGCTTTGCA...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGCACATGCGAGGAACATaGAAGTCTCAACTCAGGTTC +
Preference number: 2 (lower is better)
Translates to: AKSLRSMERSYVPGLQGEHMRGT*KSQLRF
Trigger: GAACCTGAGTTGAGACTTGCATGTTCCTCGCATGTG...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTCGAGCTCTGGATTCCTaGGTTATGGTCAGCTGTGTC +
Preference number: 2 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCRALDS*VMVSCV
Trigger: GACACAGCTGACCATAACCCAGGAATCCAGAGCTCG...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGTCTGGCCAGGCACTTaGAAAGCTTTTCTCATGAAA +
Preference number: 2 (lower is better)
Translates to: ALLIPSALHKRGVHTACSVWPGT*KAFLMK
Trigger: TTTCATGAGAAAAGCTTTCCAAGTGCCTGGCCAGAC...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGTGAATCCTGACAAGTaGCCCTGGCCCTATGCAAAG +
Preference number: 2 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFVNPDK*PWPYAK
Trigger: CTTTGCATAGGGCCAGGGCCACTTGTCAGGATTCAC...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGAAGGAGCCCCCGTGGTaGGCGTTTCCAGTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQKEPPW*AFPVGS
Trigger: GGAGCCCACTGGAAACGCCCACCACGGGGGCTCCTT...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR TCA 90 bp CTGAAAACGGGAGAAAAGAGAGCGTTAGAAAGCGGTCATCTGTCGCTTCCTGTTTGCTGCTGGGTTAGTTaGGGTGAAGCAGATGTTAGC +
Preference number: 2 (lower is better)
Translates to: LKTGEKRALESGHLSLPVCCWVS*GEADVS
Trigger: GCTAACATCTGCTTCACCTCAACTAACCCAGCAGCA...AACAGGAAGCGACAGATGACCGCTTTCTAACGCTCTCTTTTCTCCCGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGCATGCAGGGTGGGCATaGCAGCAGCCATCCCACTGC +
Preference number: 2 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQHAGWA*QQPSHC
Trigger: GCAGTGGGATGGCTGCTGGCATGCCCACCCTGCATG...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTAGTGGGCTTTTAGGTTaGCCTTCCTTCCTCCTTGTG +
Preference number: 2 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCSGLLG*PSFLLV
Trigger: CACAAGGAGGAAGGAAGGGCAACCTAAAAGCCCACT...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR CCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTAGGGCTGCTCTTCTCTaGGCTTGGGGAAGAAATTCT +
Preference number: 2 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCRAALL*AWGRNS
Trigger: AGAATTTCTTCCCCAAGCCCAGAGAAGAGCAGCCCT...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGAACAAGGAGCCCCCGTaGTGGGCGTTTCCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQNKEPP*WAFPVG
Trigger: GCCCACTGGAAACGCCCACCACGGGGGCTCCTTGTT...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR CCA 90 bp CTGAAAACGGGAGAAAAGAGAGCGTTAGAAAGCGGTCATCTGTCGCTTCCTGTTAGTCCCTTAGGAGTATaGAGAGAAGCTATGTGCCAG +
Preference number: 2 (lower is better)
Translates to: LKTGEKRALESGHLSLPVSPLGV*REAMCQ
Trigger: CTGGCACATAGCTTCTCTCCATACTCCTAAGGGACT...AACAGGAAGCGACAGATGACCGCTTTCTAACGCTCTCTTTTCTCCCGTTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTCTTTCATCACACATCTaGTGCAAGAATGTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCLSSHI*CKNVQL
Trigger: GAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAG...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTGCAGGGCTTAGAAGATaGTTTCATCACACATCTGCT +
Preference number: 2 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCAGLRR*FHHTSA
Trigger: AGCAGATGTGTGATGAAAGCATCTTCTAAGCCCTGC...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTTGGATTCCTGGGTTATaGTCAGCTGTGTCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFWIPGL*SAVSVP
Trigger: TGGCACAGACACAGCTGACCATAACCCAGGAATCCA...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CAA 90 bp ACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTaGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTCATTTT +
Preference number: 2 (lower is better)
Translates to: TWRSYSLLSLSQKVH*VPKAHSRFCVCFHF
Trigger: AAAATGAAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR GCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTTCATCACACATCTGCTaGAAGAATGTGCAGCTCTAT +
Preference number: 2 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCSSHIC*KNVQLY
Trigger: ATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGA...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTCTTTCCATGAAACTATaGCAAGTGCAAAGCCATCCT +
Preference number: 2 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTLSMKL*QVQSHP
Trigger: AGGATGGCTTTGCACTTGGCATAGTTTCATGGAAAG...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR TCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTAGGCACTACTGGCAATaGTTACTAACAAAAAGGTGT +
Preference number: 2 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCRHYWQ*LLTKRC
Trigger: ACACCTTTTTGTTAGTAATCATTGCCAGTAGTGCCT...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR CCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATGAAAACCTGGGGCCTTaGGCCCTGCCAATCTGTCAC +
Preference number: 2 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHENLGP*ALPICH
Trigger: GTGACAGATTGGCAGGGCCCAAGGCCCCAGGTTTTC...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAACCCAGCCAAGCCCTTaGTGGCTCAGACTTCAGGCT +
Preference number: 2 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILTQPSP*WLRLQA
Trigger: AGCCTGAAGTCTGAGCCACCAAGGGCTTGGCTGGGT...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR GCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCCTGAGGTCGTACCTATaGTGCAGGCTGGAACCTCCT +
Preference number: 2 (lower is better)
Translates to: ASKESLTNRILHNDCFLSLRSYL*CRLEPP
Trigger: AGGAGGTTCCAGCCTGCAGCATAGGTACGACCTCAG...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CAA 90 bp TTAGTTACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTaGCAAAGAATACTATGGCTAACCCTCATCCCCTACTGCGCATGC +
Preference number: 2 (lower is better)
Translates to: LVTPSKRRYNVSLSH*QRILWLTLIPYCAC
Trigger: GCATGCGCAGTAGGGGATGAGGGTTAGCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGTAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR GCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATTTGAGAATGATCTGTaGTGGGACACCTCCCTTAAC +
Preference number: 2 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILFENDL*WDTSLN
Trigger: GTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR CCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTACAAAAAGTTTCTAAGTaGGCTTTTAGGTTGCCCTTC +
Preference number: 2 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILQKVSK*AFRLPF
Trigger: GAAGGGCAACCTAAAAGCCCACTTAGAAACTTTTTG...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR GCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTTTTGCAGTCAGATACTaGATAAACTACAACGTACTC +
Preference number: 2 (lower is better)
Translates to: MITNKKVLKENTLKIDDCFAVRY*INYNVL
Trigger: GAGTACGTTGTAGTTTATGCAGTATCTGACTGCAAA...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 72 bp CTTTCCCAGCACCGGGCTGGGCTCTGGATACACCTGTaGGTGTCCAACCCAGCCAAGCCCTTGGTGGCTCAG +
Preference number: 3 (lower is better)
Translates to: LSQHRAGLWIHL*VSNPAKPLVAQ
Trigger: CTGAGCCACCAAGGGCTTGGCTGGGTTGGACACCCACAGGTGTATCCAGAGCCCAGCCCGGTGCTGGGAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CAA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACAACCCAGCCAAGCCCTaGGTGGCTCAGACTTCAGGC +
Preference number: 3 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNNPAKP*VAQTSG
Trigger: GCCTGAAGTCTGAGCCACCAAGGGCTTGGCTGGGTT...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 72 bp CCCTATGCAAAGCTTTCCCAGCACCGGGCTGGGCTCTaGATACACCTGTGGGTGTCCAACCCAGCCAAGCCC +
Preference number: 3 (lower is better)
Translates to: PYAKLSQHRAGL*IHLWVSNPAKP
Trigger: GGGCTTGGCTGGGTTGGACACCCACAGGTGTATCCAGAGCCCAGCCCGGTGCTGGGAAAGCTTTGCATAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CAA 90 bp GTCTCAACTCAGGTTCTGCCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGACTCGCTCCTGAGGGGGCTTaGAGGAGTGAGAAGCGACAC +
Preference number: 3 (lower is better)
Translates to: VSTQVLPLLGAEGAGPGLAPEGA*RSEKRH
Trigger: GTGTCGCTTCTCACTCCTCAAAGCCCCCTCAGGAGC...GAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 72 bp CGCCCCATGGCGCCTCGGCTAGACTCCTACCCTCTGTaGATTAGTCACGTTAAGATTGACCTAGCACCGCCG +
Preference number: 3 (lower is better)
Translates to: RPMAPRLDSYPL*ISHVKIDLAPP
Trigger: CGGCGGTGCTAGGTCAATCTTAACGTGACTAATGCACAGAGGGTAGGAGTCTAGCCGAGGCGCCATGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR TCA 72 bp CCCCTACTGCGCATGCCAACACAGCGTCGGCCCTCCTaGTACCCTCAGCTCTTCACAAACGTGGCGTTCATA +
Preference number: 3 (lower is better)
Translates to: PLLRMPTQRRPS*YPQLFTNVAFI
Trigger: TATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTGTTGGCATGCGCAGTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR CCA 72 bp ACACGCAGGGGACATACATGGGCGTGTCCTGGAGTCTaGAGGGGACCGAAACATACTCGGCACCAAAGGGAA +
Preference number: 3 (lower is better)
Translates to: TRRGHTWACPGV*RGPKHTRHQRE
Trigger: TTCCCTTTGGTGCCGAGTATGTTTCGGTCCCCTCCAGACTCCAGGACACGCCCATGTATGTCCCCTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 72 bp AGGATGAACACGCAGGGGACATACATGGGCGTGTCCTaGAGTCTGGAGGGGACCGAAACATACTCGGCACCA +
Preference number: 3 (lower is better)
Translates to: RMNTQGTYMGVS*SLEGTETYSAP
Trigger: TGGTGCCGAGTATGTTTCGGTCCCCTCCAGACTCCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 72 bp CAGGACCAGGACTCCTCCCTTGGGTTTCCCCACGGGTaGGCAGGGCTTAGAAGATGCTTTCATCACACATCT +
Preference number: 3 (lower is better)
Translates to: QDQDSSLGFPHG*AGLRRCFHHTS
Trigger: AGATGTGTGATGAAAGCATCTTCTAAGCCCTGCGCACCCGTGGGGAAACCCAAGGGAGGAGTCCTGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 72 bp CACATGCGAGGAACATGCAAGTCTCAACTCAGGTTCTaGCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGAC +
Preference number: 3 (lower is better)
Translates to: HMRGTCKSQLRF*PFWVLREQDQD
Trigger: GTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGACTTGCATGTTCCTCGCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 72 bp GGAACATGCAAGTCTCAACTCAGGTTCTGCCCCTTTTaGGTGCTGAGGGAGCAGGACCAGGACTCCTCCCTT +
Preference number: 3 (lower is better)
Translates to: GTCKSQLRFCPF*VLREQDQDSSL
Trigger: AAGGGAGGAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGACTTGCATGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 72 bp GGATACACCTGTGGGTGTCCAACCCAGCCAAGCCCTTaGTGGCTCAGACTTCAGGCTAGGGTTTTCAAAGCC +
Preference number: 3 (lower is better)
Translates to: GYTCGCPTQPSP*WLRLQARVFKA
Trigger: GGCTTTGAAAACCCTAGCCTGAAGTCTGAGCCACCAAGGGCTTGGCTGGGTTGGACACCCACAGGTGTATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR TCA 72 bp AAGCGGTCATCTGTCGCTTCCTGTTTATCTGACAATTaGAGCTCTCCACGTGCTGGGAGGGCGCGAGCACGT +
Preference number: 3 (lower is better)
Translates to: KRSSVASCLSDN*SSPRAGRARAR
Trigger: ACGTGCTCGCGCCCTCCCAGCACGTGGAGAGCTTCAATTGTCAGATAAACAGGAAGCGACAGATGACCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 72 bp GTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTaGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: VGPPDTLSSSQT*RSYSLLSLSQK
Trigger: CTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR GCA 72 bp CTGCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTaGCAGGCTTGCAAGGAGAGGGCAAAGCGCATGCAG +
Preference number: 3 (lower is better)
Translates to: LQSPLGVWREAM*QACKERAKRMQ
Trigger: CTGCATGCGCTTTGCCCTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 72 bp TTGCAAAGAATACTATGGCTAACCCTCATCCCCTACTaGGCATGCCAACACAGCGTCGGCCCTCCTGATACC +
Preference number: 3 (lower is better)
Translates to: LQRILWLTLIPY*ACQHSVGPPDT
Trigger: GGTATCAGGAGGGCCGACGCTGTGTTGGCATGCGCAGTAGGGGATGAGGGTTAGCCATAGTATTCTTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR CCA 72 bp CAGTGGCTTGGGTGTCTGCAAAGTCCCTTAGGAGTATaGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: QWLGCLQSPLGV*REAMCQACKER
Trigger: CCTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGCAGACACCCAAGCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 72 bp GAAGACCTGCATGTGTTAGCAGGGGTCCCAGTGGCTTaGGTGTCTGCAAAGTCCCTTAGGAGTATGGAGAGA +
Preference number: 3 (lower is better)
Translates to: EDLHVLAGVPVA*VSAKSLRSMER
Trigger: TCTCTCCATACTCCTAAGGGACTTTGCAGACACCCAAGCCACTGGGACCCCTGCTAACACATGCAGGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 72 bp CCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTaGTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCA +
Preference number: 3 (lower is better)
Translates to: PSALHKRGVHTA*SACPRRSIWFP
Trigger: TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR CCA 72 bp ATGTGGGAAGGCAGGTGTGGATGGAGCCTCTGGAAATaGGAGAACCCTACAGCTACCTTTCCTCTTTCTCTG +
Preference number: 3 (lower is better)
Translates to: MWEGRCGWSLWK*ENPTATFPLSL
Trigger: CAGAGAAAGAGGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCTTCCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CAA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTGGTCTGGCCAGGCACTaGGAAAGCTTTTCTCATGAA +
Preference number: 3 (lower is better)
Translates to: LLIPSALHKRGVHTACSAGLARH*ESFSHE
Trigger: TTCATGAGAAAAGCTTTCCAAGTGCCTGGCCAGACC...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 72 bp GGCATATCCAAAAAGTTTCTAAGTGGGCTTTTAGGTTaGCCTTCCTTCCTCCTTGTGGGCCACGAGAGGGAA +
Preference number: 3 (lower is better)
Translates to: GISKKFLSGLLG*PSFLLVGHERE
Trigger: TTCCCTCTCGTGGCCCACAAGGAGGAAGGAAGGGCAACCTAAAAGCCCACTTAGAAACTTTTTGGATATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR CCA 72 bp CTGATCTCAGAAATGAGAAACCGAGCTCTGGATTCCTaGGTTATGGTCAGCTGTGTCTGTGCCATGTGTGTC +
Preference number: 3 (lower is better)
Translates to: LISEMRNRALDS*VMVSCVCAMCV
Trigger: GACACACATGGCACAGACACAGCTGACCATAACCCAGGAATCCAGAGCTCGGTTTCTCATTTCTGAGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CAA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTTGCTCTTCTCTGGGCTaGGGGAAGAAATTCTGCACT +
Preference number: 3 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCCSSLG*GKKFCT
Trigger: AGTGCAGAATTTCTTCCCCAAGCCCAGAGAAGAGCA...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CAA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTTTTCCTCTTTCTCTGTaGCCATCCCCCAGATTGCAC +
Preference number: 3 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCFPLSL*PSPRLH
Trigger: GTGCAATCTGGGGGATGGCAACAGAGAAAGAGGAAA...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CAA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGGCCCTTCCTTCCTCCTaGTGGGCCACGAGAGGGAAG +
Preference number: 3 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQALPSS*WATRGK
Trigger: CTTCCCTCTCGTGGCCCACAAGGAGGAAGGAAGGGC...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR GCA 72 bp CTTTCTAGTGCTGACATTAGACACATGCGAGGAACATaGAAGTCTCAACTCAGGTTCTGCCCCTTTTGGGTG +
Preference number: 3 (lower is better)
Translates to: LSSADIRHMRGT*KSQLRFCPFWV
Trigger: CACCCAAAAGGGGCAGAACCTGAGTTGAGACTTGCATGTTCCTCGCATGTGTCTAATGTCAGCACTAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 72 bp CATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTaGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCT +
Preference number: 3 (lower is better)
Translates to: HTACSACPRRSI*FPKHTQGFVFA
Trigger: AGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTACAGGTTCTGCCCCTTTaGGGTGCTGAGGGAGCAGGA +
Preference number: 3 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILQVLPL*GAEGAG
Trigger: TCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTG...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAAGGGGTCCCAGTGGCTaGGGTGTCTGCAAAGTCCCT +
Preference number: 3 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILRGPSG*GVCKVP
Trigger: AGGGACTTTGCAGACACCCAAGCCACTGGGACCCCT...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR GCA 72 bp TGCATAAACTACAACGTACTCCTTTCCATGAAACTATaGCAAGTGCAAAGCCATCCTCTGAGGTCGTACCTA +
Preference number: 3 (lower is better)
Translates to: CINYNVLLSMKL*QVQSHPLRSYL
Trigger: TAGGTACGACCTCAGAGGATGGCTTTGCACTTGGCATAGTTTCATGGAAAGGAGTACGTTGTAGTTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CCA 72 bp TATAATGTCTCGCTTTCACATTTGCAAAGAATACTATaGCTAACCCTCATCCCCTACTGCGCATGCCAACAC +
Preference number: 3 (lower is better)
Translates to: YNVSLSHLQRIL*LTLIPYCACQH
Trigger: GTGTTGGCATGCGCAGTAGGGGATGAGGGTTAGCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR CAA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCCAAAGCCCCATGTCTTaGGGACTGAACCCCCTATGG +
Preference number: 3 (lower is better)
Translates to: ASKESLTNRILHNDCFLSQSPMS*GLNPLW
Trigger: CCATAGGGGGTTCAGTCCCAAAGACATGGGGCTTTG...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR-3UTR CAA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGAAGTGGGCTTTTAGGTaGCCCTTCCTTCCTCCTTGT +
Preference number: 3 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQKWAFR*PFLPPC
Trigger: ACAAGGAGGAAGGAAGGGCAACCTAAAAGCCCACTT...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATCCCAGAAGGTCCATTaGGTTCCCAAAGCACACTCA +
Preference number: 3 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILSQKVH*VPKAHS
Trigger: TGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAAGCACACTCAAGGTTTaGTGTTTGCTTTCATTTTCT +
Preference number: 3 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILSTLKV*CLLSFS
Trigger: AGAAAATGAAAGCAAACACAAAACCTTGAGTGTGCT...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGCCTTGGGTAGGAGGATaGGTGAGCGCCGGCCACGCG +
Preference number: 4 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWPWVGG*VSAGHA
Trigger: CGCGTGGCCGGCGCTCACCCATCCTCCTACCCAAGG...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACCGCGGTCCTGGCGGCTaGCCTTCTCTAGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNRGPGG*PSLAGR
Trigger: TCTCCCTGCTAGAGAAGGCCAGCCGCCAGGACCGCG...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGAGCAGCTCGCGGTCCTaGCGGCTGGCCTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWSSSRS*RLAFSS
Trigger: GCTAGAGAAGGCCAGCCGCCAGGACCGCGAGCTGCT...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGTCAGCAGCCGCCAGCTaGCGCTGCATCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWSAAAS*RCISSS
Trigger: GCTGGATGAGATGCAGCGGCAGCTGGCGGCTGCTGA...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACTGGGGCAGGGGGATCTaGGCCCAGGATGAACACGCA +
Preference number: 4 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNWGRGI*AQDEHA
Trigger: TGCGTGTTCATCCTGGGCCCAGATCCCCCTGCCCCA...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGTCTGCTTGTTGGCCTTaGGCACAGTGCGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWSACWP*AQCAAW
Trigger: CCACGCTGCGCACTGTGCTCAAGGCCAACAAGCAGA...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGTTGGCCAGGCCGCCGTaGTCAAAGCCATTGACCAGG +
Preference number: 4 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWLARPP*SKPLTR
Trigger: CCTGGTCAATGGCTTTGAGCACGGCGGCCTGGCCAA...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACCCCCGTCCCACCATCTaGTCGGCCCGCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYPRPTI*SARLRS
Trigger: GCTCCTGAGGCGGGCCGAGCAGATGGTGGGACGGGG...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACCGAGGAGAAGGTGGCTaGGTCCTCCTTGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNRGEGG*VLLEGL
Trigger: AAGGCCCTCAAGGAGGACGCAGCCACCTTCTCCTCG...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACTCTGCTGGATGGCCATaGGCAGCAGCGAGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNSAGWP*AAASSA
Trigger: CGCTGAACTCGCTGCTGCGCATGGCCATCCAGCAGA...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACATCCCCTACTGCGCATaGCAACACAGCGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNIPYCA*QHSVGP
Trigger: AGGGCCGACGCTGTGTTGGCATGCGCAGTAGGGGAT...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGGGCCGGATAATTGGCTaGTGGGGTCACCCCAAGTAC +
Preference number: 4 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWGRIIG*WGHPKY
Trigger: GTACTTGGGGTGACCCCAGCAGCCAATTATCCGGCC...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGGGTTGTAGATGTTCATaGGCTCCCGGCGTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWGCRCS*APGVGH
Trigger: GTGACCCACGCCGGGAGCCCATGAACATCTACAACC...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp GTCTCAACTCAGGTTCTGCCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGACTCTACGCTCGGTGTGGCTaGCTTGGTCTTCGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: VSTQVLPLLGAEGAGPGLYARCG*LGLRGG
Trigger: GCCGCCCCGAAGACCAAGCCAGCCACACCGAGCGTA...GAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACACCCAGCCAAGCCCTTaGTGGCTCAGACTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNTQPSP*WLRLQA
Trigger: AGCCTGAAGTCTGAGCCACCAAGGGCTTGGCTGGGT...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp AAGTGGCCCTGGCCCTATGCAAAGCTTTCCCAGCACCGGGCTGGGCTCTGGATACAGGGCAGAGAGCTGTaGGAGGGGGCAACACGGTCT +
Preference number: 4 (lower is better)
Translates to: KWPWPYAKLSQHRAGLWIQGREL*EGATRS
Trigger: AGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTG...TATCCAGAGCCCAGCCCGGTGCTGGGAAAGCTTTGCATAGGGCCAGGGCCACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGGGGGTCCCAGTGGCTTaGGTGTCTGCAAAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWGVPVA*VSAKSL
Trigger: AAGGGACTTTGCAGACACCCAAGCCACTGGGACCCC...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp AAGTGGCCCTGGCCCTATGCAAAGCTTTCCCAGCACCGGGCTGGGCTCTGGATAATAGACCACGGCACCTaGGACCGTCTCTACGCGAGG +
Preference number: 4 (lower is better)
Translates to: KWPWPYAKLSQHRAGLWIIDHGT*DRLYAR
Trigger: CCTCGCGTAGAGACGGTCTCAGGTGCCGTGGTCTAT...TATCCAGAGCCCAGCCCGGTGCTGGGAAAGCTTTGCATAGGGCCAGGGCCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACTGCTGTGCTTCTCGCTaGAGAACACCTGGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNCCASR*RTPGWP
Trigger: TGGCCAACCAGGTGTTCTGCAGCGAGAAGCACAGCA...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp AAGTGGCCCTGGCCCTATGCAAAGCTTTCCCAGCACCGGGCTGGGCTCTGGATACCTCGGCATCGTTGTTaGGCTCGGCAGCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: KWPWPYAKLSQHRAGLWIPRHRC*ARQHRH
Trigger: GTGACGATGCTGCCGAGCCCAACAACGATGCCGAGG...TATCCAGAGCCCAGCCCGGTGCTGGGAAAGCTTTGCATAGGGCCAGGGCCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTGGTCGGAGACGAGGCTaGGGGAGGGCGGTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: LLIPSALHKRGVHTACSAGRRRG*GRAVRG
Trigger: GCCTCGCACCGCCCTCCCCCAGCCTCGTCTCCGACC...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACTTCTCCTCGGCGTGCTaGGCCTCACGAGCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYFSSAC*ASRASC
Trigger: GCACGAGGCTCGTGAGGCCCAGCACGCCGAGGAGAA...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACCTTCTCCTGCTGTTCTaGCAGGGAGCCCCGCGTGTG +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYLLLLF*QGAPRV
Trigger: CACACGCGGGGCTCCCTGTCAGAACAGCAGGAGAAG...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp ACTCGAATGCCTCTTCCGCATGAGAGACAAGGCAAGCAGCCTGCAGGAGAGAAGGGGAGACCTTCTCCGTaGGTGCCTGGCCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TRMPLPHERQGKQPAGEKGRPSP*VPGPQP
Trigger: AGGCTGAGGGCCAGGCACTCACGGAGAAGGTCTCCC...CTTCTCTCCTGCAGGCTGCTTGCCTTGTCTCTCATGCGGAAGAGGCATTCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGCGCTCATTCTCCGACTaGGTGTTGGTGAGGACATTG +
Preference number: 4 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWRSFSD*VLVRTL
Trigger: CAATGTCCTCACCAACACGCAGTCGGAGAATGAGCG...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGCGCTCCTTGCTGGCCTaGAGGCGCCGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: AKSLRSMERSYVPGLQGERSLLA*RRRRAL
Trigger: GAGTGCCCTGCGGCGCCTGCAGGCCAGCAAGGAGCG...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CACCGCCGTCCCGCTGCTGCTGGGTTAGTTGAGGTGAAGCAGATGTTAGCTGCAGAAGCAGATGTTAGCTaGAGCGTGCGGCGCCCCACA +
Preference number: 4 (lower is better)
Translates to: HRRPAAAGLVEVKQMLAAEADVS*SVRRPT
Trigger: TGTGGGGCGCCGCACGCTGCAGCTAACATCTGCTTC...TGCAGCTAACATCTGCTTCACCTCAACTAACCCAGCAGCAGCGGGACGGCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp GTCTCAACTCAGGTTCTGCCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGACTCTGGGGCCTTGGGCCCTaGCAATCTGTCACCTCACAG +
Preference number: 4 (lower is better)
Translates to: VSTQVLPLLGAEGAGPGLWGLGP*QSVTSQ
Trigger: CTGTGAGGTGACAGATTGGCAGGGCCCAAGGCCCCA...GAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGACGGCGCCGACATGGTaGCCGAGGGCTGAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: AKSLRSMERSYVPGLQGETAPTW*PRAEPA
Trigger: AGCCGGCTCAGCCCTCGGCCACCATGTCGGCGCCGT...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp GTCTCAACTCAGGTTCTGCCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGACTCCGCAGGCGGCCACGCTaGATCTCCACATTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: VSTQVLPLLGAEGAGPGLRRRPR*ISTFWL
Trigger: CAACCAGAATGTGGAGATCCAGCGTGGCCGCCTGCG...GAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACTGTCCAGTGGCAGCTTaGCCAGGCCGCCGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYCPVAA*PGRRAQ
Trigger: TTGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACA...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCACCTTGGGTAGGAGGATaGGTGAGCGCCGGCCACGCG +
Preference number: 4 (lower is better)
Translates to: RGVHTACSACPRRSIWFPPWVGG*VSAGHA
Trigger: CGCGTGGCCGGCGCTCACCCATCCTCCTACCCAAGG...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCATCTTCGGGGCGGCTTTaGCACGGCCACGCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: ALLIPSALHKRGVHTACSSSGRL*HGHAGS
Trigger: AGACCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGA...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCTCGCTGCAGAACACCTaGTTGGCCAGCCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSSLQNT*LASPVP
Trigger: GGGCACCGGGCTGGCCAACCAGGTGTTCTGCAGCGA...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACCGTGCTCAAAGCCATTaGCCAGGGCCTCGGCATCGT +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYRAQSH*PGPRHR
Trigger: ACGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACG...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp AAGTGGCCCTGGCCCTATGCAAAGCTTTCCCAGCACCGGGCTGGGCTCTGGATAGGGGGCTTTGAGGAGTaGGAAGCGACACAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KWPWPYAKLSQHRAGLWIGGFEE*EATQSS
Trigger: AGAGCTTTGTGTCGCTTCTCACTCCTCAAAGCCCCC...TATCCAGAGCCCAGCCCGGTGCTGGGAAAGCTTTGCATAGGGCCAGGGCCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTCGGCCACGCCGGGTCTaGTCATGGTCCAGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: LLIPSALHKRGVHTACSARPRRV*SWSSSS
Trigger: GCTCGAGCTGGACCATGAGCAGACCCGGCGTGGCCG...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTGGTTGGCCAGCCCGGTaGCCTCGGCCCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCGWPAR*PRPCRW
Trigger: CCAGCGACAGGGCCGAGGGCACCGGGCTGGCCAACC...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGAGGTCGTACCTATGCTaGAGGCTGGAACCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWRSYLC*RLEPPK
Trigger: TTTAGGAGGTTCCAGCCTGCAGCATAGGTACGACCT...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGAGGGCAAAGCGCATaGAGGGTGGGCATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYRGQSA*RVGMPA
Trigger: TGCTGGCATGCCCACCCTGCATGCGCTTTGCCCTCT...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTCCGACGGCGCCGACATaGTGGCCGAGGGCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTPTAPT*WPRAEP
Trigger: CGGCTCAGCCCTCGGCCACCATGTCGGCGCCGTCGG...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTCGGAGACGAGGCTaGGGGAGGGCGGTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFGRRRG*GRAVRG
Trigger: GCCTCGCACCGCCCTCCCCCAGCCTCGTCTCCGACC...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACTGTGGATGGAGCCTCTaGAAATGGGAGAACCCTACA +
Preference number: 4 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNCGWSL*KWENPT
Trigger: TGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACA...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTGGTGGGCGTTTCCAGTaGGCTCCTGGCGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LLIPSALHKRGVHTACSAGGRFQ*APGEPG
Trigger: GCCAGGCTCGCCAGGAGCCCACTGGAAACGCCCACC...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAAAGGAGCCCCCGTGGTaGGCGTTTCCAGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ALLIPSALHKRGVHTACSKEPPW*AFPVGS
Trigger: GGAGCCCACTGGAAACGCCCACCACGGGGGCTCCTT...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACCCATGTCTTTGGGACTaGACCCCCTATGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYPCLWD*TPYGRP
Trigger: CGGCCTTCCATAGGGGGTTCAGTCCCAAAGACATGG...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCAAACACGGTGGGAGCTaGGGCGGACAGCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSKHGGS*GGQLQD
Trigger: GTCCTGTAGCTGTCCGCCTCAGCTCCCACCGTGTTT...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACTGCTTCAGCTCCGTCTaGAGCTCTAGCACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYCFSSV*SSSTFR
Trigger: GCGGAAGGTGCTAGAGCTGCAGACGGAGCTGAAGCA...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTCCCCGTCCCACCATCTaGTCGGCCCGCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCPRPTI*SARLRS
Trigger: GCTCCTGAGGCGGGCCGAGCAGATGGTGGGACGGGG...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCACAGCAGCCATCCCACTaGGAGTCTTGCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RGVHTACSACPRRSIWFPQQPSH*ESCWGR
Trigger: CCTGCCCCAGCAAGACTCGCAGTGGGATGGCTGCTG...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTACGGCGCCGACATGGTaGCCGAGGGCTGAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCTAPTW*PRAEPA
Trigger: AGCCGGCTCAGCCCTCGGCCACCATGTCGGCGCCGT...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CACCGCCGTCCCGCTGCTGCTGGGTTAGTTGAGGTGAAGCAGATGTTAGCTGCACCTCCTTCTTGGGCGTaGAGGTCTTGTTGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: HRRPAAAGLVEVKQMLAAPPSWA*RSCCPV
Trigger: CACTGGACAACAAGACCTCCACGCCCAAGAAGGAGG...TGCAGCTAACATCTGCTTCACCTCAACTAACCCAGCAGCAGCGGGACGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCACTTGCTCTTCAGGTTaGCAAGGGCCACCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSTCSSG*QGPPRP
Trigger: CGGCCGAGGTGGCCCTTGCCAACCTGAAGAGCAAGT...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp GTCTCAACTCAGGTTCTGCCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGACTCGGTAGTAGTCCAGCATaGCACGGTTGGGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: VSTQVLPLLGAEGAGPGLGSSPA*HGWVSH
Trigger: ATGAGACACCCAACCGTGTCATGCTGGACTACTACC...GAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGGCAATGCGCTGGCGTaGCAGCTCCGTGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCGNALA*QLRGAV
Trigger: GACCGCACCACGGAGCTGTCACGCCAGCGCATTGCC...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGAAGGGGCTGCAGTGTaGCAGGGCCGGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFEGAAV*QGRVAK
Trigger: CTTGGCCACCCGGCCCTGTCACACTGCAGCCCCTTC...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAAAACACGGTGGGAGCTaGGGCGGACAGCTACAGGAC +
Preference number: 4 (lower is better)
Translates to: ALLIPSALHKRGVHTACSKHGGS*GGQLQD
Trigger: GTCCTGTAGCTGTCCGCCTCAGCTCCCACCGTGTTT...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCAGCTCTGCCTCGTGCTaGCACCAGACAAACACGGTG +
Preference number: 4 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSSSASC*HQTNTV
Trigger: CACCGTGTTTGTCTGGTGTCAGCACGAGGCAGAGCT...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAAGGCCTCCTTGAGCTaGTCCATCTCGCTGCGGATA +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYKASLS*SISLRI
Trigger: TATCCGCAGCGAGATGGAGCAGCTCAAGGAGGCCTT...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp ACTCGAATGCCTCTTCCGCATGAGAGACAAGGCAAGCAGCCTGCAGGAGAGAAGTGCTTCAGCTCCGTCTaGAGCTCTAGCACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: TRMPLPHERQGKQPAGEKCFSSV*SSSTFR
Trigger: GCGGAAGGTGCTAGAGCTGCAGACGGAGCTGAAGCA...CTTCTCTCCTGCAGGCTGCTTGCCTTGTCTCTCATGCGGAAGAGGCATTCGAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTCTGTCTGCCGCTCCTTaGTGGCCTGCAGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCLSAAP*WPAGAA
Trigger: TGCGGCGCCTGCAGGCCAGCAAGGAGCGGCAGACAG...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTCTGTCTGCCGCTCCTTaGTGGCCTGCAGGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFLSAAP*WPAGAA
Trigger: TGCGGCGCCTGCAGGCCAGCAAGGAGCGGCAGACAG...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp GAAGATGCTTTCATCACACATCTGCTGCAAGAATGTGCAGCTCTATCCCCACCTAGCCAGGCGAGGGGCTaGTGTCCCCCGTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: EDAFITHLLQECAALSPPSQARG*CPPSHH
Trigger: ATGGTGGGACGGGGGACAGCAGCCCCTCGCCTGGCT...AGGTGGGGATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAGCATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCATCTGCTGGATGGCCATaGGCAGCAGCGAGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: RGVHTACSACPRRSIWFPSAGWP*AAASSA
Trigger: CGCTGAACTCGCTGCTGCGCATGGCCATCCAGCAGA...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTCGGCCACGCCGGGTCTaGTCATGGTCCAGCTCGAGC +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFRPRRV*SWSSSS
Trigger: GCTCGAGCTGGACCATGAGCAGACCCGGCGTGGCCG...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAACTGCAGCTTGAGCTaGTGCTTCTCCTCGAGCACC +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYNCSLS*CFSSST
Trigger: GGTGCTCGAGGAGAAGCACCAGCTCAAGCTGCAGTT...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCAGTGGCAGCTTaGCCAGGCCGCCGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LLIPSALHKRGVHTACSACPVAA*PGRRAQ
Trigger: TTGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACA...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAACTTGCTCTTCAGGTTaGCAAGGGCCACCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: RGVHTACSACPRRSIWFPTCSSG*QGPPRP
Trigger: CGGCCGAGGTGGCCCTTGCCAACCTGAAGAGCAAGT...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGTCGGTGTGGCTGGCTTaGTCTTCGGGGCGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: AKSLRSMERSYVPGLQGESVWLA*SSGRLW
Trigger: CCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGA...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp GTCTCAACTCAGGTTCTGCCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGACTCCGAGCTCTGGATTCCTaGGTTATGGTCAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: VSTQVLPLLGAEGAGPGLRALDS*VMVSCV
Trigger: GACACAGCTGACCATAACCCAGGAATCCAGAGCTCG...GAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCGAAAACCTGGGGCCTTaGGCCCTGCCAATCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSENLGP*ALPICH
Trigger: GTGACAGATTGGCAGGGCCCAAGGCCCCAGGTTTTC...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp GTCTCAACTCAGGTTCTGCCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGACTCGTGAATCCTGACAAGTaGCCCTGGCCCTATGCAAAG +
Preference number: 4 (lower is better)
Translates to: VSTQVLPLLGAEGAGPGLVNPDK*PWPYAK
Trigger: CTTTGCATAGGGCCAGGGCCACTTGTCAGGATTCAC...GAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCACGCAGGGGACATACATaGGCGTGTCCTGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: RGVHTACSACPRRSIWFPRRGHT*ACPGVW
Trigger: CCAGACTCCAGGACACGCCCATGTATGTCCCCTGCG...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTCAGGCTCGGTGTGGCTaGCTTGGTCTTCGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCQARCG*LGLRGG
Trigger: GCCGCCCCGAAGACCAAGCCAGCCACACCGAGCCTG...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375512.3
CDS-3UTR TCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTCTCCAGCTGCCGCTCTaGGATCTCCTTGAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: LLIPSALHKRGVHTACSALQLPL*DLLEAD
Trigger: ATCCGCCTCAAGGAGATCTCAGAGCGGCAGCTGGAG...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTCAGTGCGCAGCGTGGTaGTCTGCTCCCGCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFQCAAW*SAPAWC
Trigger: GCACCAAGCGGGAGCAGATCACCACGCTGCGCACTG...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp ACTCGAATGCCTCTTCCGCATGAGAGACAAGGCAAGCAGCCTGCAGGAGAGAAGTCGAGCTCCTCGAACTaGAGCTTGAGCTGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: TRMPLPHERQGKQPAGEKSSSSN*SLSWCF
Trigger: GAAGCACCAGCTCAAGCTGCAGTTCGAGGAGCTCGA...CTTCTCTCCTGCAGGCTGCTTGCCTTGTCTCTCATGCGGAAGAGGCATTCGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTGTCCTGCAGCGTTaGCAGCAGGCCCGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LLIPSALHKRGVHTACSACVLQR*QQARLF
Trigger: GAAAAGGCGGGCCTGCTGGCAACGCTGCAGGACACA...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGCTTCTGTGTGTCCTaGAGCGTTGCCAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLIPSALHKRGVHTACSACFCVS*SVASRP
Trigger: GGGCCTGCTGGCAACGCTGCAGGACACACAGAAGCA...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGCCTCACGAGCCTCGTaGGTGCTGCGCAGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFASRAS*VLRSAL
Trigger: CAAGGCACTGCGCAGCACGCACGAGGCTCGTGAGGC...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGACCTTCTCCGTGAGTaGCTGGCCCTCAGCCTCATA +
Preference number: 4 (lower is better)
Translates to: ALLIPSALHKRGVHTACSDLLRE*LALSLI
Trigger: TATGAGGCTGAGGGCCAGGCACTCACGGAGAAGGTC...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTGTGACAGCTCCGTGGTaGGGTCCACGGCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTVTAPW*GPRLPA
Trigger: TGCAGGCAGCCGTGGACCGCACCACGGAGCTGTCAC...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAACCCTCATCCCCTACTaGGCATGCCAACACAGCGTC +
Preference number: 4 (lower is better)
Translates to: RGVHTACSACPRRSIWFPTLIPY*ACQHSV
Trigger: GACGCTGTGTTGGCATGCGCAGTAGGGGATGAGGGT...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGCCTATTCCTTTTCCATaGTCTGCCTCATTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWPIPFP*SASFSQ
Trigger: CTGAGAAAATGAGGCAGAGCATGGAAAAGGAATAGG...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTCCTCGGCATCGTTGTTaGGCTCGGCAGCATCGTCAC +
Preference number: 4 (lower is better)
Translates to: LLIPSALHKRGVHTACSAPRHRC*ARQHRH
Trigger: GTGACGATGCTGCCGAGCCCAACAACGATGCCGAGG...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTCGCGGTCCTGGCGGCTaGCCTTCTCTAGCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCRGPGG*PSLAGR
Trigger: TCTCCCTGCTAGAGAAGGCCAGCCGCCAGGACCGCG...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CTGAAAACGGGAGAAAAGAGAGCGTTAGAAAGCGGTCATCTGTCGCTTCCTGTTCGCCGGGTCTGCTCATaGTCCAGCTCGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LKTGEKRALESGHLSLPVRRVCS*SSSSSS
Trigger: GGAGCTGCTCGAGCTGGACCATGAGCAGACCCGGCG...AACAGGAAGCGACAGATGACCGCTTTCTAACGCTCTCTTTTCTCCCGTTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTCGCCGGGTCTGCTCATaGTCCAGCTCGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCRRVCS*SSSSSS
Trigger: GGAGCTGCTCGAGCTGGACCATGAGCAGACCCGGCG...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GTCTCAACTCAGGTTCTGCCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGACTCCGGATAATTGGCTGCTaGGGTCACCCCAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: VSTQVLPLLGAEGAGPGLRIIGC*GHPKYK
Trigger: TTTGTACTTGGGGTGACCCCAGCAGCCAATTATCCG...GAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCCCTGACAAGTGGCCCTaGCCCTATGCAAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSPDKWP*PYAKLS
Trigger: GGAAAGCTTTGCATAGGGCCAGGGCCACTTGTCAGG...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTTGTGACAGGGCCGGGTaGCCAAGTCCTCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFCDRAG*PSPPGS
Trigger: GCTGCCAGGAGGACTTGGCCACCCGGCCCTGTCACA...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGCCGACTGCGTGTTGGTaGGGACATTGCGCAACTGCT +
Preference number: 4 (lower is better)
Translates to: AKSLRSMERSYVPGLQGEPTACW*GHCATA
Trigger: AGCAGTTGCGCAATGTCCTCACCAACACGCAGTCGG...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAGATGCTCATGTAGTGTaGCAGCTCCTTGCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RGVHTACSACPRRSIWFPDAHVV*QLLAQA
Trigger: AGCCTGCGCAAGGAGCTGTCACACTACATGAGCATC...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp GAAGATGCTTTCATCACACATCTGCTGCAAGAATGTGCAGCTCTATCCCCACCTCTTCTCCTGCTGTTCTaGCAGGGAGCCCCGCGTGTG +
Preference number: 4 (lower is better)
Translates to: EDAFITHLLQECAALSPPLLLLF*QGAPRV
Trigger: CACACGCGGGGCTCCCTGTCAGAACAGCAGGAGAAG...AGGTGGGGATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAGCATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGCTCCTGAGAGGCAATaGGCTGGCGTGACAGCTCCG +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFAPERQ*AGVTAP
Trigger: CGGAGCTGTCACGCCAGCGCATTGCCTCTCAGGAGC...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CTGAAAACGGGAGAAAAGAGAGCGTTAGAAAGCGGTCATCTGTCGCTTCCTGTTGTCAGCGCCAGCTTCTaGTGGATGGCCATGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LKTGEKRALESGHLSLPVVSASF*WMAMRS
Trigger: GCTGCGCATGGCCATCCAGCAGAAGCTGGCGCTGAC...AACAGGAAGCGACAGATGACCGCTTTCTAACGCTCTCTTTTCTCCCGTTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp GAAGATGCTTTCATCACACATCTGCTGCAAGAATGTGCAGCTCTATCCCCACCTTTGAAGCTCTCCACGTaGTGGGAGGGCGCGAGCACG +
Preference number: 4 (lower is better)
Translates to: EDAFITHLLQECAALSPPLKLST*WEGAST
Trigger: CGTGCTCGCGCCCTCCCAGCACGTGGAGAGCTTCAA...AGGTGGGGATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAGCATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTGGTGTGAGGAGCACCTaGCTCACCTGCTGTCCACGC +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCGVRST*LTCCPR
Trigger: GCGTGGACAGCAGGTGAGGCAGGTGCTCCTCACACC...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCACGTAGTACTGCTCCTTaGAGGCCGACTCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: ALLIPSALHKRGVHTACSRSTAP*RPTPGS
Trigger: TGATCCAGGAGTCGGCCTCCAAGGAGCAGTACTACG...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTATCTCCTTCAGCTCCTaGGCCACAGAGGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFISFSS*ATEARR
Trigger: GCGCCTGGCCTCTGTGGCCCAGGAGCTGAAGGAGAT...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCACCTCCTTCTTGGGCGTaGAGGTCTTGTTGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ALLIPSALHKRGVHTACSPPSWA*RSCCPV
Trigger: CACTGGACAACAAGACCTCCACGCCCAAGAAGGAGG...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTGGCGTGACAGCTCCGTaGTGCGGTCCACGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFGVTAP*CGPRLP
Trigger: AGGCAGCCGTGGACCGCACCACGGAGCTGTCACGCC...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTTCGGTGTGGCTGGCTTaGTCTTCGGGGCGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTSVWLA*SSGRLW
Trigger: CCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGA...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTGTGGCCAAGTCCTCCTaGCAGCTACTCTACAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLIPSALHKRGVHTACSAVAKSS*QLLYRL
Trigger: GAGCCTGTAGAGTAGCTGCCAGGAGGACTTGGCCAC...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375512.3
CDS-3UTR TCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTCTCCAGCTGCCGCTCTaGGATCTCCTTGAGGCGGAT +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCLQLPL*DLLEAD
Trigger: ATCCGCCTCAAGGAGATCTCAGAGCGGCAGCTGGAG...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTCGTGCTCAAAGCCATTaGCCAGGGCCTCGGCATCGT +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFRAQSH*PGPRHR
Trigger: ACGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACG...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGAATGCCTCTTCCGCATaGGAGACAAGGCAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AKSLRSMERSYVPGLQGENASSA*ETRQAA
Trigger: GGCTGCTTGCCTTGTCTCTCATGCGGAAGAGGCATT...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTCAGCGTCGGCCCTCCTaGTACCCTCAGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCQRRPS*YPQLFT
Trigger: TGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTG...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTCAGCGTCGGCCCTCCTaGTACCCTCAGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFQRRPS*YPQLFT
Trigger: TGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTG...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTTTGGCCAGGCCGCCGTaGTCAAAGCCATTGACCAGG +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCLARPP*SKPLTR
Trigger: CCTGGTCAATGGCTTTGAGCACGGCGGCCTGGCCAA...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGCCGCCAGCTGCCGCTaGATCTCATCCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFAASCR*ISSSCV
Trigger: TACACAGCTGGATGAGATGCAGCGGCAGCTGGCGGC...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGGGTTTCCCCACGGGTaGGCAGGGCTTAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCGFPHG*AGLRRC
Trigger: GCATCTTCTAAGCCCTGCGCACCCGTGGGGAAACCC...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp ACTCGAATGCCTCTTCCGCATGAGAGACAAGGCAAGCAGCCTGCAGGAGAGAAGAGTGGGCTTTTAGGTTaGCCTTCCTTCCTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: TRMPLPHERQGKQPAGEKSGLLG*PSFLLV
Trigger: CACAAGGAGGAAGGAAGGGCAACCTAAAAGCCCACT...CTTCTCTCCTGCAGGCTGCTTGCCTTGTCTCTCATGCGGAAGAGGCATTCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTCGCTGGCCTTCAGCATaGCCACTAGCTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCRWPSA*PLALPC
Trigger: GCAGGGAAGAGCTAGTGGGCATGCTGAAGGCCAGCG...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTAGCACCTGCCTCACCTaGTGTCCACGCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCSTCLT*CPRWPS
Trigger: TGAAGGCCAGCGTGGACAGCAGGTGAGGCAGGTGCT...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTAACTGCAGCTTGAGCTaGTGCTTCTCCTCGAGCACC +
Preference number: 4 (lower is better)
Translates to: LLIPSALHKRGVHTACSANCSLS*CFSSST
Trigger: GGTGCTCGAGGAGAAGCACCAGCTCAAGCTGCAGTT...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACTGGATCTCCACATTCTaGTTGATCTCCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYWISTF*LISFSS
Trigger: GGAGCTGAAGGAGATCAACCAGAATGTGGAGATCCA...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTAGAGCAGCTGAGGACTaGGTGCTCCTGAGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTRAAED*VLLRGL
Trigger: AAGCCCCCTCAGGAGCACCCAGTCCTCAGCTGCTCT...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCACTAAGGACCAAGGTCTaGCCAGGCACTTGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: ALLIPSALHKRGVHTACSLRTKV*PGTWKA
Trigger: AGCTTTCCAAGTGCCTGGCCAGACCTTGGTCCTTAG...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp GAAGATGCTTTCATCACACATCTGCTGCAAGAATGTGCAGCTCTATCCCCACCTAAAGCGCATGCAGGGTaGGCATGCCAGCAGCCATCC +
Preference number: 4 (lower is better)
Translates to: EDAFITHLLQECAALSPPKAHAG*ACQQPS
Trigger: GGATGGCTGCTGGCATGCCCACCCTGCATGCGCTTT...AGGTGGGGATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAGCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CAA 72 bp CCTTCAGCATGCCCACTAGCTCTTCCCTGCTCGCTTTaGAGAATGATCTGTGCTGGGACACCTCCCTTAACT +
Preference number: 4 (lower is better)
Translates to: PSACPLALPCSL*RMICAGTPPLT
Trigger: AGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGAGCAGGGAAGAGCTAGTGGGCATGCTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
3UTR CAA 72 bp ACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTaGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: TLSSSQTWRSYS*LSLSQKVHLVP
Trigger: GGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTCCGACTGCGTGTTGGTaGGGACATTGCGCAACTGCT +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCPTACW*GHCATA
Trigger: AGCAGTTGCGCAATGTCCTCACCAACACGCAGTCGG...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGCTCTGAGATCTCCTTaGGGCGGATGGCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFALRSP*GGWHPP
Trigger: TGGAGGATGCCATCCGCCTCAAGGAGATCTCAGAGC...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp CTGAAAACGGGAGAAAAGAGAGCGTTAGAAAGCGGTCATCTGTCGCTTCCTGTTCTCTATCCCCACCTCTaGCCCCCACCTAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LKTGEKRALESGHLSLPVLYPHL*PPPKRA
Trigger: TGCTCTCTTAGGTGGGGGTCAGAGGTGGGGATAGAG...AACAGGAAGCGACAGATGACCGCTTTCTAACGCTCTCTTTTCTCCCGTTTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTCCTACCTGTGAATCCTaGCAAGTGGCCCTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFPTCES*QVALAL
Trigger: TAGGGCCAGGGCCACTTGTCAGGATTCACAGGTAGG...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGACCTTCTCCGTGAGTaGCTGGCCCTCAGCCTCATA +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCDLLRE*LALSLI
Trigger: TATGAGGCTGAGGGCCAGGCACTCACGGAGAAGGTC...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTGTCAGCGCCAGCTTCTaGTGGATGGCCATGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFVSASF*WMAMRS
Trigger: GCTGCGCATGGCCATCCAGCAGAAGCTGGCGCTGAC...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CACCGCCGTCCCGCTGCTGCTGGGTTAGTTGAGGTGAAGCAGATGTTAGCTGCACTTTCCATGAAACTATaGCAAGTGCAAAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: HRRPAAAGLVEVKQMLAALSMKL*QVQSHP
Trigger: AGGATGGCTTTGCACTTGGCATAGTTTCATGGAAAG...TGCAGCTAACATCTGCTTCACCTCAACTAACCCAGCAGCAGCGGGACGGCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACTTTGAGAATGATCTGTaGTGGGACACCTCCCTTAAC +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYFENDL*WDTSLN
Trigger: GTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAA...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTGGTGTGAGGAGCACCTaGCTCACCTGCTGTCCACGC +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFGVRST*LTCCPR
Trigger: GCGTGGACAGCAGGTGAGGCAGGTGCTCCTCACACC...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGGGCGTTCATACAGCTTaGTCAGCTTGTCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: AKSLRSMERSYVPGLQGEGVHTA*SACPRR
Trigger: CCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCC...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTACCCTCATCCCCTACTaGGCATGCCAACACAGCGTC +
Preference number: 4 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTTLIPY*ACQHSV
Trigger: GACGCTGTGTTGGCATGCGCAGTAGGGGATGAGGGT...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCGCTCTTCTCTGGGCTTaGGGAAGAAATTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSALLWA*GRNSAL
Trigger: AAGTGCAGAATTTCTTCCCCAAGCCCAGAGAAGAGC...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTCACCGGGCTGGGCTCTaGATACACCTGTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFHRAGL*IHLWVS
Trigger: GGACACCCACAGGTGTATCCAGAGCCCAGCCCGGTG...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTACCAGACAAACACGGTaGGAGCTGAGGCGGACAGCT +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFTRQTR*ELRRTA
Trigger: AGCTGTCCGCCTCAGCTCCCACCGTGTTTGTCTGGT...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTCACTCAGATTCTCTGTaGGGCGGGTCACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFHSDSL*GGSPSP
Trigger: AGGAGAAGGTGACCCGCCTCACAGAGAATCTGAGTG...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTCACTCAGATTCTCTGTaGGGCGGGTCACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCHSDSL*GGSPSP
Trigger: AGGAGAAGGTGACCCGCCTCACAGAGAATCTGAGTG...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGGGCAATGCGCTGGCGTaGCAGCTCCGTGGTGCGGTC +
Preference number: 4 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQGNALA*QLRGAV
Trigger: GACCGCACCACGGAGCTGTCACGCCAGCGCATTGCC...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTGCACAGGCACAGGTGTaGCTTACGCTCGGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFAQAQV*LTLGVA
Trigger: AGCCACACCGAGCGTAAGTCACACCTGTGCCTGTGC...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCACCAAGAGTACCAATTTaGCCACTCCCACTAACCTCA +
Preference number: 4 (lower is better)
Translates to: ALLIPSALHKRGVHTACSPRVPI*PLPLTS
Trigger: TGAGGTTAGTGGGAGTGGTCAAATTGGTACTCTTGG...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTAAGGCCTCCTTGAGCTaGTCCATCTCGCTGCGGATA +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCKASLS*SISLRI
Trigger: TATCCGCAGCGAGATGGAGCAGCTCAAGGAGGCCTT...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCACTTGTGGTTTGTGTGTaGTTGTCCAAAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ALLIPSALHKRGVHTACSLVVCV*LSKGLL
Trigger: AAGGAGGCCTTTGGACAAGCACACACAAACCACAAG...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGAGACGCTTGATCTCATaGTTGAGGCCCTCAAACTCC +
Preference number: 4 (lower is better)
Translates to: AKSLRSMERSYVPGLQGERRLIS*LRPSNS
Trigger: GGAGTTTGAGGGCCTCAAGCATGAGATCAAGCGTCT...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGCCCTTCTCCTCGGCGTaGTGGGCCTCACGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQPFSSA*WASRAS
Trigger: CGAGGCTCGTGAGGCCCAGCACGCCGAGGAGAAGGG...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTCGAGGAGAAGGTGGCTaGGTCCTCCTTGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFRGEGG*VLLEGL
Trigger: AAGGCCCTCAAGGAGGACGCAGCCACCTTCTCCTCG...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTGCCGCCAGCTGCCGCTaGATCTCATCCAGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFAASCR*ISSSCV
Trigger: TACACAGCTGGATGAGATGCAGCGGCAGCTGGCGGC...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCCCGACGGCGCCGACATaGTGGCCGAGGGCTGAGCCG +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSPTAPT*WPRAEP
Trigger: CGGCTCAGCCCTCGGCCACCATGTCGGCGCCGTCGG...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTCGTAGTACTGCTCCTTaGAGGCCGACTCCTGGATCA +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCRSTAP*RPTPGS
Trigger: TGATCCAGGAGTCGGCCTCCAAGGAGCAGTACTACG...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTATGGCATCCTCCAGCTaGCTGTTGAGGTACTCGGTC +
Preference number: 4 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTMASSS*LLRYSV
Trigger: GACCGAGTACCTCAACAGCCAGCTGGAGGATGCCAT...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGTCTTCGGGGCGGCTTTaGCACGGCCACGCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQSSGRL*HGHAGS
Trigger: AGACCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGA...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTGACTTACGCTCGGTGTaGCTGGCTTGGTCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFDLRSV*LAWSSG
Trigger: CCCCGAAGACCAAGCCAGCCACACCGAGCGTAAGTC...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTTGTGCCATGTGTGTCTaGCCAGCAGAATACAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCCAMCV*PAEYRG
Trigger: GCCCCTGTATTCTGCTGGCCAGACACACATGGCACA...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CTGAAAACGGGAGAAAAGAGAGCGTTAGAAAGCGGTCATCTGTCGCTTCCTGTTGCGTGTCCTGGAGTCTaGAGGGGACCGAAACATACT +
Preference number: 4 (lower is better)
Translates to: LKTGEKRALESGHLSLPVACPGV*RGPKHT
Trigger: AGTATGTTTCGGTCCCCTCCAGACTCCAGGACACGC...AACAGGAAGCGACAGATGACCGCTTTCTAACGCTCTCTTTTCTCCCGTTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACTGTGTAAAGGTTCCTTaGCAGGAGAACATGCATATG +
Preference number: 4 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYCVKVP*QENMHM
Trigger: CATATGCATGTTCTCCTGCCAAGGAACCTTTACACA...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTCCACCTGGTTCTGTCTaGGCACAGACACTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFPPGSV*AQTLAS
Trigger: AGAAGCAAGTGTCTGTGCTCAGACAGAACCAGGTGG...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTAGATCTCAGGCCCGTTaGTGTCCACCTCGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCRSQAR*CPPRSS
Trigger: ACTACTACGAGGTGGACATCAACGGGCCTGAGATCT...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGGGGAGACCTTCTCCGTaGGTGCCTGGCCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQGRPSP*VPGPQP
Trigger: AGGCTGAGGGCCAGGCACTCACGGAGAAGGTCTCCC...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTGGTAGTAGTCCAGCATaGCACGGTTGGGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTGSSPA*HGWVSH
Trigger: ATGAGACACCCAACCGTGTCATGCTGGACTACTACC...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTTGCAAAGCCATCCTCTaGGGTCGTACCTATGCTGCA +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCCKAIL*GRTYAA
Trigger: TGCAGCATAGGTACGACCTCAGAGGATGGCTTTGCA...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGTGGATACACTTAGCTaGGCTCCTCGCTGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFVDTLS*APRWVK
Trigger: TTTGACCCAGCGAGGAGCTCAGCTAAGTGTATCCAC...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATCGCTCCTTGCTGGCCTaGAGGCGCCGCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHRSLLA*RRRRAL
Trigger: GAGTGCCCTGCGGCGCCTGCAGGCCAGCAAGGAGCG...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGGTGACAGCTCCGTGGTaGGGTCCACGGCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQVTAPW*GPRLPA
Trigger: TGCAGGCAGCCGTGGACCGCACCACGGAGCTGTCAC...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCGACTCCTACCCTCTGTaGATTAGTCACGTTAAGATT +
Preference number: 4 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSDSYPL*ISHVKI
Trigger: AATCTTAACGTGACTAATGCACAGAGGGTAGGAGTC...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCACTTTCATCACACATCTaGTGCAAGAATGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RGVHTACSACPRRSIWFPLSSHI*CKNVQL
Trigger: GAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAG...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTCAAAAGGACGGGCTCTaGACTAAGGACCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCQKDGL*TKDQGL
Trigger: CAGACCTTGGTCCTTAGTGCAGAGCCCGTCCTTTTG...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTTGGAGAGAAGCTATGTaGCAGGCTTGCAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCWREAM*QACKER
Trigger: CCTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCA...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CACCGCCGTCCCGCTGCTGCTGGGTTAGTTGAGGTGAAGCAGATGTTAGCTGCATCAAGGTTTTGTGTTTaGTTTCATTTTCTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: HRRPAAAGLVEVKQMLAASRFCV*FHFLSP
Trigger: GGGGCTTAGAAAATGAAAGCAAACACAAAACCTTGA...TGCAGCTAACATCTGCTTCACCTCAACTAACCCAGCAGCAGCGGGACGGCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGGTCTCGGCCAGCTCGTaGGACAGCCGCTTCACCTCG +
Preference number: 4 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQVSASS*DSRFTS
Trigger: CGAGGTGAAGCGGCTGTCCCACGAGCTGGCCGAGAC...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATCTGCCGCTCCTTGCTaGCCTGCAGGCGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILSAAPC*PAGAAG
Trigger: CCCTGCGGCGCCTGCAGGCCAGCAAGGAGCGGCAGA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTTCTGCCGCTCCTTGCTaGCCTGCAGGCGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCSAAPC*PAGAAG
Trigger: CCCTGCGGCGCCTGCAGGCCAGCAAGGAGCGGCAGA...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTGGTTGTAGATGTTCATaGGCTCCCGGCGTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFGCRCS*APGVGH
Trigger: GTGACCCACGCCGGGAGCCCATGAACATCTACAACC...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCGGCGTGACAGCTCCGTaGTGCGGTCCACGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGGVTAP*CGPRLP
Trigger: AGGCAGCCGTGGACCGCACCACGGAGCTGTCACGCC...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTTGGAGCCTCTGGAAATaGGAGAACCCTACAGCTACC +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCWSLWK*ENPTAT
Trigger: GGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCA...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGAGTCCCTTAGGAGTATaGAGAGAAGCTATGTGCCAG +
Preference number: 4 (lower is better)
Translates to: AKSLRSMERSYVPGLQGESPLGV*REAMCQ
Trigger: CTGGCACATAGCTTCTCTCCATACTCCTAAGGGACT...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCGGTGGGCGTTTCCAGTaGGCTCCTGGCGAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGGGRFQ*APGEPG
Trigger: GCCAGGCTCGCCAGGAGCCCACTGGAAACGCCCACC...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTAGCTCTTCACAAACGTaGCGTTCATACAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LLIPSALHKRGVHTACSASSSQT*RSYSLL
Trigger: GAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCT...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCTTGCAAAGAATACTATaGCTAACCCTCATCCCCTAC +
Preference number: 4 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSLQRIL*LTLIPY
Trigger: GTAGGGGATGAGGGTTAGCCATAGTATTCTTTGCAA...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CAA 72 bp TCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTaGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: SSQTWRSYSLLS*SQKVHLVPKAH
Trigger: GTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTAACATCTCCTACCTGTaGATCCTGACAAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCNISYL*ILTSGP
Trigger: AGGGCCACTTGTCAGGATTCACAGGTAGGAGATGTT...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCGAAGGGGCTGCAGTGTaGCAGGGCCGGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSEGAAV*QGRVAK
Trigger: CTTGGCCACCCGGCCCTGTCACACTGCAGCCCCTTC...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTACAGACACTTGCTTCTaGAGGCTGATGTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFTDTCF*RLMFSS
Trigger: GGAGGAGAACATCAGCCTGCAGAAGCAAGTGTCTGT...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTAGACGCTTGATCTCATaGTTGAGGCCCTCAAACTCC +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFRRLIS*LRPSNS
Trigger: GGAGTTTGAGGGCCTCAAGCATGAGATCAAGCGTCT...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTACCCTTCTCCTCGGCGTaGTGGGCCTCACGAGCCTCG +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILPFSSA*WASRAS
Trigger: CGAGGCTCGTGAGGCCCAGCACGCCGAGGAGAAGGG...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCAGCCAGGCGAGGGGCTaGTGTCCCCCGTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSSQARG*CPPSHH
Trigger: ATGGTGGGACGGGGGACAGCAGCCCCTCGCCTGGCT...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTCTCATTCTCATACTTaGTCTTCAGGTTGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LLIPSALHKRGVHTACSASHSHT*SSGWQG
Trigger: CCCTTGCCAACCTGAAGAGCAAGTATGAGAATGAGA...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGTCAGCAGCCGCCAGCTaGCGCTGCATCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQSAAAS*RCISSS
Trigger: GCTGGATGAGATGCAGCGGCAGCTGGCGGCTGCTGA...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCTTCTCCTCGGCGTGCTaGGCCTCACGAGCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGFSSAC*ASRASC
Trigger: GCACGAGGCTCGTGAGGCCCAGCACGCCGAGGAGAA...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTTGGATTCCTGGGTTATaGTCAGCTGTGTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCWIPGL*SAVSVP
Trigger: TGGCACAGACACAGCTGACCATAACCCAGGAATCCA...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTTGTTTATCTGACAATTaGAGCTCTCCACGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCCLSDN*SSPRAG
Trigger: CCCAGCACGTGGAGAGCTTCAATTGTCAGATAAACA...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp GAAGATGCTTTCATCACACATCTGCTGCAAGAATGTGCAGCTCTATCCCCACCTCAGCTACTCTACAGCTaGAAACGGGAGAAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: EDAFITHLLQECAALSPPQLLYS*KREKRE
Trigger: CTCTCTTTTCTCCCGTTTTCAGCTGTAGAGTAGCTG...AGGTGGGGATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAGCATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCGCCTCACGAGCCTCGTaGGTGCTGCGCAGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSASRAS*VLRSAL
Trigger: CAAGGCACTGCGCAGCACGCACGAGGCTCGTGAGGC...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCGGATCTTCTCACGCGTaGTCTCGGCCAGCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGGSSHA*SRPARG
Trigger: CCCACGAGCTGGCCGAGACCACGCGTGAGAAGATCC...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTTGGATCTCCACATTCTaGTTGATCTCCTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCWISTF*LISFSS
Trigger: GGAGCTGAAGGAGATCAACCAGAATGTGGAGATCCA...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATAGCAGCTCGCGGTCCTaGCGGCTGGCCTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHSSSRS*RLAFSS
Trigger: GCTAGAGAAGGCCAGCCGCCAGGACCGCGAGCTGCT...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTCCTCGGCCCTGTCGCTaGCACAGGCACAGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCPRPCR*HRHRCD
Trigger: GTCACACCTGTGCCTGTGCCAGCGACAGGGCCGAGG...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTTGTGACAGGGCCGGGTaGCCAAGTCCTCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCCDRAG*PSPPGS
Trigger: GCTGCCAGGAGGACTTGGCCACCCGGCCCTGTCACA...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAAAGGAGCCCCCGTGGTaGGCGTTTCCAGTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILKEPPW*AFPVGS
Trigger: GGAGCCCACTGGAAACGCCCACCACGGGGGCTCCTT...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCAACAAGGAGCCCCCGTaGTGGGCGTTTCCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGNKEPP*WAFPVG
Trigger: GCCCACTGGAAACGCCCACCACGGGGGCTCCTTGTT...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCGTCCAAAGGCCTCCTTaGGCTGCTCCATCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGVQRPP*AAPSRC
Trigger: GCAGCGAGATGGAGCAGCTCAAGGAGGCCTTTGGAC...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGGCTCTGAGATCTCCTTaGGGCGGATGGCATCCTCCA +
Preference number: 4 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQALRSP*GGWHPP
Trigger: TGGAGGATGCCATCCGCCTCAAGGAGATCTCAGAGC...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCATAGACCACGGCACCTaGGACCGTCTCTACGCGAGG +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGIDHGT*DRLYAR
Trigger: CCTCGCGTAGAGACGGTCTCAGGTGCCGTGGTCTAT...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCTGCTTCTGTGTGTCCTaGAGCGTTGCCAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGCFCVS*SVASRP
Trigger: GGGCCTGCTGGCAACGCTGCAGGACACACAGAAGCA...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCTTGTCCAGGGCTGTCTaGCGCTCCTTGCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSLSRAV*RSLLAC
Trigger: GCAGGCCAGCAAGGAGCGGCAGACAGCCCTGGACAA...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTTTGTCCAGGGCTGTCTaGCGCTCCTTGCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCLSRAV*RSLLAC
Trigger: GCAGGCCAGCAAGGAGCGGCAGACAGCCCTGGACAA...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTTCTCATTGTTGCACATaGACACGTGGTGGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCSHCCT*TRGGRD
Trigger: ATCTCTACCACCACGTGTGCATGTGCAACAATGAGA...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAGCTCCTGAGAGGCAATaGGCTGGCGTGACAGCTCCG +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILAPERQ*AGVTAP
Trigger: CGGAGCTGTCACGCCAGCGCATTGCCTCTCAGGAGC...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATCATGCAGGGTGGGCATaGCAGCAGCCATCCCACTGC +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHHAGWA*QQPSHC
Trigger: GCAGTGGGATGGCTGCTGGCATGCCCACCCTGCATG...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCAGCACCTGCCTCACCTaGTGTCCACGCTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGSTCLT*CPRWPS
Trigger: TGAAGGCCAGCGTGGACAGCAGGTGAGGCAGGTGCT...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCGGATCTTCTCACGCGTaGTCTCGGCCAGCTCGTGGG +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSGSSHA*SRPARG
Trigger: CCCACGAGCTGGCCGAGACCACGCGTGAGAAGATCC...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATTGGAGGCCGACTCCTaGATCAGGCTCTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILLEADS*IRLSSR
Trigger: CCGGGAGGAGAGCCTGATCCAGGAGTCGGCCTCCAA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCTTGGAGGCCGACTCCTaGATCAGGCTCTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSLEADS*IRLSSR
Trigger: CCGGGAGGAGAGCCTGATCCAGGAGTCGGCCTCCAA...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCATCTCCTTCAGCTCCTaGGCCACAGAGGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSISFSS*ATEARR
Trigger: GCGCCTGGCCTCTGTGGCCCAGGAGCTGAAGGAGAT...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTGGTCTTGTTGTCCAGTaGCAGCTTGGCCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCGLVVQ*QLGQAA
Trigger: GGCGGCCTGGCCAAGCTGCCACTGGACAACAAGACC...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAGGTCTTGTTGTCCAGTaGCAGCTTGGCCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILGLVVQ*QLGQAA
Trigger: GGCGGCCTGGCCAAGCTGCCACTGGACAACAAGACC...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp CTGAAAACGGGAGAAAAGAGAGCGTTAGAAAGCGGTCATCTGTCGCTTCCTGTTTGTTCCTATGCGCACTaGCTTTGTAGGCATTCACAT +
Preference number: 4 (lower is better)
Translates to: LKTGEKRALESGHLSLPVCSYAH*LCRHSH
Trigger: ATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACA...AACAGGAAGCGACAGATGACCGCTTTCTAACGCTCTCTTTTCTCCCGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CAA 72 bp TCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTaGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: SYSLLSLSQKVH*VPKAHSRFCVC
Trigger: GCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTGTCCAAAGGCCTCCTTaGGCTGCTCCATCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCVQRPP*AAPSRC
Trigger: GCAGCGAGATGGAGCAGCTCAAGGAGGCCTTTGGAC...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATCTGCTTGTTGGCCTTaGGCACAGTGCGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILSACWP*AQCAAW
Trigger: CCACGCTGCGCACTGTGCTCAAGGCCAACAAGCAGA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCTCACAAGTGTCCTGCTaGTGCAACGCCCCATGGCGC +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSSQVSC*CNAPWR
Trigger: GCGCCATGGGGCGTTGCATCAGCAGGACACTTGTGA...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCGATCTGGGCCCAGGATaGACACGCAGGGGACATACA +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGDLGPG*TRRGHT
Trigger: TGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATC...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGAGGACATTGCGCAACTaGTTCAGCTCCGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQRTLRN*FSSVCS
Trigger: GCTGCAGACGGAGCTGAAGCAGTTGCGCAATGTCCT...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATTGTGTCCTGCAGCGTTaGCAGCAGGCCCGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHCVLQR*QQARLF
Trigger: GAAAAGGCGGGCCTGCTGGCAACGCTGCAGGACACA...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTCGGGTCACCTTCTCCTaGTGTTCTGACAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCRVTFS*CSDREP
Trigger: GGGCTCCCTGTCAGAACAGCAGGAGAAGGTGACCCG...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTACGGGTCACCTTCTCCTaGTGTTCTGACAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILRVTFS*CSDREP
Trigger: GGGCTCCCTGTCAGAACAGCAGGAGAAGGTGACCCG...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCTGCAGGAGAGAAGACTaGAGCCTCAGGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGCRRED*SLRSSW
Trigger: CCAGCTGGACCTGAGGCTGCAGTCTTCTCTCCTGCA...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTCGCTGGCCTTCAGCATaGCCACTAGCTCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCRWPSA*PLALPC
Trigger: GCAGGGAAGAGCTAGTGGGCATGCTGAAGGCCAGCG...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATATCCCCTACTGCGCATaGCAACACAGCGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHIPYCA*QHSVGP
Trigger: AGGGCCGACGCTGTGTTGGCATGCGCAGTAGGGGAT...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCCGCAGGCGGCCACGCTaGATCTCCACATTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSRRRPR*ISTFWL
Trigger: CAACCAGAATGTGGAGATCCAGCGTGGCCGCCTGCG...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAAAGCTCTCCACGTGCTaGGAGGGCGCGAGCACGTTA +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILKLSTC*EGASTL
Trigger: TAACGTGCTCGCGCCCTCCCAGCACGTGGAGAGCTT...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTAGCTCTTCACAAACGTaGCGTTCATACAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFSSSQT*RSYSLL
Trigger: GAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCT...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTTTGCAAAGAATACTATaGCTAACCCTCATCCCCTAC +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFLQRIL*LTLIPY
Trigger: GTAGGGGATGAGGGTTAGCCATAGTATTCTTTGCAA...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCTCTACAGGCTCGGTGTaGCTGGCTTGGTCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSSTGSV*LAWSSG
Trigger: CCCCGAAGACCAAGCCAGCCACACCGAGCCTGTAGA...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375512.3
CDS-3UTR TCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCGGAATTTGTACTCCTTaGTGTCATCCCGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGGICTP*CHPAGG
Trigger: GCCGCCTGCGGGATGACATCAAGGAGTACAAATTCC...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTTGGGGAATGCTATTTTaGAAAGAATTGCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFWGMLF*KELQWH
Trigger: ATGCCACTGCAATTCTTTTCAAAATAGCATTCCCCA...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATAGCTCTGCCTCGTGCTaGCACCAGACAAACACGGTG +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHSSASC*HQTNTV
Trigger: CACCGTGTTTGTCTGGTGTCAGCACGAGGCAGAGCT...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCTCGAGCTCCTCGAACTaGAGCTTGAGCTGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGSSSSN*SLSWCF
Trigger: GAAGCACCAGCTCAAGCTGCAGTTCGAGGAGCTCGA...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGGGCGTTCATACAGCTTaGTCAGCTTGTCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQGVHTA*SACPRR
Trigger: CCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCC...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCCGAGGCCCTCCTTCTTaGGCGTGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSRGPPS*AWRSCC
Trigger: ACAACAAGACCTCCACGCCCAAGAAGGAGGGCCTCG...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTACGAGGCCCTCCTTCTTaGGCGTGGAGGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILRGPPS*AWRSCC
Trigger: ACAACAAGACCTCCACGCCCAAGAAGGAGGGCCTCG...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATAGGTTCTGCCCCTTTTaGGTGCTGAGGGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHRFCPF*VLREQD
Trigger: GTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCT...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATGGAAGGCCGGATAATTaGCTGCTGGGGTCACCCCAA +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHGRPDN*LLGSPQ
Trigger: TTGGGGTGACCCCAGCAGCCAATTATCCGGCCTTCC...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTCAAAAAGTTTCTAAGTaGGCTTTTAGGTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTQKVSK*AFRLPF
Trigger: GAAGGGCAACCTAAAAGCCCACTTAGAAACTTTTTG...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCACCAGACAAACACGGTaGGAGCTGAGGCGGACAGCT +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSTRQTR*ELRRTA
Trigger: AGCTGTCCGCCTCAGCTCCCACCGTGTTTGTCTGGT...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATGATGCTCATGTAGTGTaGCAGCTCCTTGCGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHDAHVV*QLLAQA
Trigger: AGCCTGCGCAAGGAGCTGTCACACTACATGAGCATC...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCAGGACATTGCGCAACTaGTTCAGCTCCGTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSRTLRN*FSSVCS
Trigger: GCTGCAGACGGAGCTGAAGCAGTTGCGCAATGTCCT...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCCGCTCATTCTCCGACTaGGTGTTGGTGAGGACATTG +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGRSFSD*VLVRTL
Trigger: CAATGTCCTCACCAACACGCAGTCGGAGAATGAGCG...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTTCAAGGTTTTGTGTTTaGTTTCATTTTCTAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTSRFCV*FHFLSP
Trigger: GGGGCTTAGAAAATGAAAGCAAACACAAAACCTTGA...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTCCTATTCCTTTTCCATaGTCTGCCTCATTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFPIPFP*SASFSQ
Trigger: CTGAGAAAATGAGGCAGAGCATGGAAAAGGAATAGG...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTACTCTGGATACACCTGTaGGTGTCCAACCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILLWIHL*VSNPAK
Trigger: CTTGGCTGGGTTGGACACCCACAGGTGTATCCAGAG...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTACCACCTGGTTCTGTCTaGGCACAGACACTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILPPGSV*AQTLAS
Trigger: AGAAGCAAGTGTCTGTGCTCAGACAGAACCAGGTGG...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTAGATCTCAGGCCCGTTaGTGTCCACCTCGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCRSQAR*CPPRSS
Trigger: ACTACTACGAGGTGGACATCAACGGGCCTGAGATCT...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAGTGGATACACTTAGCTaGGCTCCTCGCTGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILVDTLS*APRWVK
Trigger: TTTGACCCAGCGAGGAGCTCAGCTAAGTGTATCCAC...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTAGGCACTACTGGCAATaGTTACTAACAAAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFRHYWQ*LLTKRC
Trigger: ACACCTTTTTGTTAGTAATCATTGCCAGTAGTGCCT...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCCTGAGCACAGACACTTaGTTCTGCAGGCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGLSTDT*FCRLMF
Trigger: GAACATCAGCCTGCAGAAGCAAGTGTCTGTGCTCAG...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATTCTCAACTCAGGTTCTaGCCCTTTTGGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHSQLRF*PFWVLR
Trigger: CCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGA...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCAGGGCTGCTCTTCTCTaGGCTTGGGGAAGAAATTCT +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGRAALL*AWGRNS
Trigger: AGAATTTCTTCCCCAAGCCCAGAGAAGAGCAGCCCT...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
3UTR CAA 72 bp CCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTaGCAAAGAATACTATGGCTAACCCTCATCCCCTAC +
Preference number: 4 (lower is better)
Translates to: PSKRRYNVSLSH*QRILWLTLIPY
Trigger: GTAGGGGATGAGGGTTAGCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGCTGCTGGGTTAGTTaGGGTGAAGCAGATGTTAGC +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILCCWVS*GEADVS
Trigger: GCTAACATCTGCTTCACCTCAACTAACCCAGCAGCA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR TCA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCCCAAGAGTACCAATTTaGCCACTCCCACTAACCTCA +
Preference number: 4 (lower is better)
Translates to: QAREDIMSRFHICKEYYGPRVPI*PLPLTS
Trigger: TGAGGTTAGTGGGAGTGGTCAAATTGGTACTCTTGG...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTCTGAGCACAGACACTTaGTTCTGCAGGCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCLSTDT*FCRLMF
Trigger: GAACATCAGCCTGCAGAAGCAAGTGTCTGTGCTCAG...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATAGTGTGACAGCTCCTTaGGCAGGCTGTTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHSVTAP*AGCSSV
Trigger: AACAGAAGAACAGCCTGCGCAAGGAGCTGTCACACT...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAAGTGTGACAGCTCCTTaGGCAGGCTGTTCTTCTGTT +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILSVTAP*AGCSSV
Trigger: AACAGAAGAACAGCCTGCGCAAGGAGCTGTCACACT...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTTTTGCAGTCAGATACTaGATAAACTACAACGTACTC +
Preference number: 4 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFFAVRY*INYNVL
Trigger: GAGTACGTTGTAGTTTATGCAGTATCTGACTGCAAA...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCAGTGGGCTTTTAGGTTaGCCTTCCTTCCTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSSGLLG*PSFLLV
Trigger: CACAAGGAGGAAGGAAGGGCAACCTAAAAGCCCACT...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTGCAGCCACCTTCTTGTaGTTTGTGTGTGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCAATFL*FVCACP
Trigger: TGGACAAGCACACACAAACCACAAGAAGGTGGCTGC...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGTGGGGAATGCTATTTTaGAAAGAATTGCAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQWGMLF*KELQWH
Trigger: ATGCCACTGCAATTCTTTTCAAAATAGCATTCCCCA...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATCTCATTGTTGCACATaGACACGTGGTGGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILSHCCT*TRGGRD
Trigger: ATCTCTACCACCACGTGTGCATGTGCAACAATGAGA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATTCTCATTCTCATACTTaGTCTTCAGGTTGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHSHSHT*SSGWQG
Trigger: CCCTTGCCAACCTGAAGAGCAAGTATGAGAATGAGA...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCCCTAATCACAGTAAATaGTGTGCTTCTCGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSPNHSK*CASRCR
Trigger: TCTGCAGCGAGAAGCACAGCATTTACTGTGATTAGG...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCCTGACATTAGACACATaGGAGGAACATGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSLTLDT*EEHASL
Trigger: GAGACTTGCATGTTCCTCGCATGTGTCTAATGTCAG...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR GCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATTTTGAGAATGATCTGTaGTGGGACACCTCCCTTAAC +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHFENDL*WDTSLN
Trigger: GTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAA...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATGTCTGGCCAGGCACTTaGAAAGCTTTTCTCATGAAA +
Preference number: 4 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHVWPGT*KAFLMK
Trigger: TTTCATGAGAAAAGCTTTCCAAGTGCCTGGCCAGAC...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGTTCCTATGCGCACTaGCTTTGTAGGCATTCACAT +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILCSYAH*LCRHSH
Trigger: ATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGTAGAAGGAGTCATTaGTGCTCATGTAGTGTGACA +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILCRRSH*CSCSVT
Trigger: TGTCACACTACATGAGCATCAATGACTCCTTCTACA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTTGTAGAAGGAGTCATTaGTGCTCATGTAGTGTGACA +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCCRRSH*CSCSVT
Trigger: TGTCACACTACATGAGCATCAATGACTCCTTCTACA...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR GCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCTCATCACACATCTGCTaGAAGAATGTGCAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSSSHIC*KNVQLY
Trigger: ATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGA...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CCA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGTGTAAAGGTTCCTTaGCAGGAGAACATGCATATG +
Preference number: 4 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILCVKVP*QENMHM
Trigger: CATATGCATGTTCTCCTGCCAAGGAACCTTTACACA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR TCA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTAGGCACTACTGGCAATaGTTACTAACAAAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: MITNKKVLKENTLKIDDCRHYWQ*LLTKRC
Trigger: ACACCTTTTTGTTAGTAATCATTGCCAGTAGTGCCT...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CCA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCCAAAAAGTTTCTAAGTaGGCTTTTAGGTTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ASKESLTNRILHNDCFLSQKVSK*AFRLPF
Trigger: GAAGGGCAACCTAAAAGCCCACTTAGAAACTTTTTG...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 90 bp TCACCAGCCGCGCGTACTCCTCCTCCTCCGACGGCGCCGACATGGTaGCCGAGGGCTGAGCCGGCTCCCACTGAGGCTCTCGCAGGCCGG +
Preference number: 5 (lower is better)
Translates to: SPAARTPPPPTAPTW*PRAEPAPTEALAGR
Trigger: CCGGCCTGCGAGAGCCTCAGTGGGAGCCGGCTCAGCCCTCGGCCACCATGTCGGCGCCGTCGGAGGAGGAGGAGTACGCGCGGCTGGTGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 90 bp CCATCACCAGCCGCGCGTACTCCTCCTCCTCCGACGGCGCCGACATaGTGGCCGAGGGCTGAGCCGGCTCCCACTGAGGCTCTCGCAGGC +
Preference number: 5 (lower is better)
Translates to: PSPAARTPPPPTAPT*WPRAEPAPTEALAG
Trigger: GCCTGCGAGAGCCTCAGTGGGAGCCGGCTCAGCCCTCGGCCACCATGTCGGCGCCGTCGGAGGAGGAGGAGTACGCGCGGCTGGTGATGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 90 bp CGGCCCTGTCGCTGGCACAGGCACAGGTGTGACTTACGCTCGGTGTaGCTGGCTTGGTCTTCGGGGCGGCTTTGGCACGGCCACGCCGGG +
Preference number: 5 (lower is better)
Translates to: RPCRWHRHRCDLRSV*LAWSSGRLWHGHAG
Trigger: CCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAGCGTAAGTCACACCTGTGCCTGTGCCAGCGACAGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS TCA 90 bp GCCAGCCCGGTGCCCTCGGCCCTGTCGCTGGCACAGGCACAGGTGTaGCTTACGCTCGGTGTGGCTGGCTTGGTCTTCGGGGCGGCTTTG +
Preference number: 5 (lower is better)
Translates to: ASPVPSALSLAQAQV*LTLGVAGLVFGAAL
Trigger: CAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAGCGTAAGTCACACCTGTGCCTGTGCCAGCGACAGGGCCGAGGGCACCGGGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS CCA 90 bp CGCTGGCACAGGCACAGGTGTGACTTACGCTCGGTGTGGCTGGCTTaGTCTTCGGGGCGGCTTTGGCACGGCCACGCCGGGTCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: RWHRHRCDLRSVWLA*SSGRLWHGHAGSAH
Trigger: ATGAGCAGACCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAGCGTAAGTCACACCTGTGCCTGTGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS CCA 90 bp GCCACGAGAGGGAAGGGGAAGGGGCTGCAGTGTGACAGGGCCGGGTaGCCAAGTCCTCCTGGCAGCTACTCTACAGGCTCGGTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: ATRGKGKGLQCDRAG*PSPPGSYSTGSVWL
Trigger: CAGCCACACCGAGCCTGTAGAGTAGCTGCCAGGAGGACTTGGCCACCCGGCCCTGTCACACTGCAGCCCCTTCCCCTTCCCTCTCGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375512.3
CDS GCA 90 bp AGGCGGGTCACCTTCTCCTGCTGTTCTGACAGGGAGCCCCGCGTGTaGTCCAGCTGCTTCTGTGTGTCCTGCAGCGTTGCCAGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RRVTFSCCSDREPRV*SSCFCVSCSVASRP
Trigger: GGGCCTGCTGGCAACGCTGCAGGACACACAGAAGCAGCTGGAGCACACGCGGGGCTCCCTGTCAGAACAGCAGGAGAAGGTGACCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 90 bp CGGTGCGAGGCCCTCCTTCTTGGGCGTGGAGGTCTTGTTGTCCAGTaGCAGCTTGGCCAGGCCGCCGTGCTCAAAGCCATTGACCAGGGC +
Preference number: 5 (lower is better)
Translates to: RCEALLLGRGGLVVQ*QLGQAAVLKAIDQG
Trigger: GCCCTGGTCAATGGCTTTGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACAACAAGACCTCCACGCCCAAGAAGGAGGGCCTCGCACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 90 bp TGTGACTTACGCTCGGTGTGGCTGGCTTGGTCTTCGGGGCGGCTTTaGCACGGCCACGCCGGGTCTGCTCATGGTCCAGCTCGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: CDLRSVWLAWSSGRL*HGHAGSAHGPARAA
Trigger: AGCTGCTCGAGCTGGACCATGAGCAGACCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAGCGTAAGTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS CCA 90 bp TACTCTACAGGCTCGGTGTGGCTGGCTTGGTCTTCGGGGCGGCTTTaGCACGGCCACGCCGGGTCTGCTCATGGTCCAGCTCGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: YSTGSVWLAWSSGRL*HGHAGSAHGPARAA
Trigger: AGCTGCTCGAGCTGGACCATGAGCAGACCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAGCCTGTAGAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375512.3
CDS-3UTR CAA 90 bp CACCGCCGTCCCGCTGCTGCTGGGTTAGTTGAGGTGAAGCAGATGTTAGCTGCAGTCTTCGGGGCGGCTTaGGCACGGCCACGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: HRRPAAAGLVEVKQMLAAVFGAA*ARPRRV
Trigger: GACCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGAC...TGCAGCTAACATCTGCTTCACCTCAACTAACCCAGCAGCAGCGGGACGGCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS GCA 90 bp GGCGTGGAGGTCTTGTTGTCCAGTGGCAGCTTGGCCAGGCCGCCGTaGTCAAAGCCATTGACCAGGGCCTCGGCATCGTTGTTGGGCTCG +
Preference number: 5 (lower is better)
Translates to: GVEVLLSSGSLARPP*SKPLTRASASLLGS
Trigger: CGAGCCCAACAACGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACAACAAGACCTCCACGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACGCGAGGCCCTCCTTCTaGGGCGTGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNARPSF*GVEVLL
Trigger: CAACAAGACCTCCACGCCCAAGAAGGAGGGCCTCGC...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS TCA 90 bp TGTTGTCCAGTGGCAGCTTGGCCAGGCCGCCGTGCTCAAAGCCATTaGCCAGGGCCTCGGCATCGTTGTTGGGCTCGGCAGCATCGTCAC +
Preference number: 5 (lower is better)
Translates to: CCPVAAWPGRRAQSH*PGPRHRCWARQHRH
Trigger: GTGACGATGCTGCCGAGCCCAACAACGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS GCA 90 bp ACCTTCTCCTGCTGTTCTGACAGGGAGCCCCGCGTGTGCTCCAGCTaGTTCTGTGTGTCCTGCAGCGTTGCCAGCAGGCCCGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: TFSCCSDREPRVCSS*FCVSCSVASRPAFS
Trigger: GGAAAAGGCGGGCCTGCTGGCAACGCTGCAGGACACACAGAAGCAGCTGGAGCACACGCGGGGCTCCCTGTCAGAACAGCAGGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS GCA 90 bp CGCCGCAGGGCACTCAGATTCTCTGTGAGGCGGGTCACCTTCTCCTaGTGTTCTGACAGGGAGCCCCGCGTGTGCTCCAGCTGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: RRRALRFSVRRVTFS*CSDREPRVCSSCFC
Trigger: ACAGAAGCAGCTGGAGCACACGCGGGGCTCCCTGTCAGAACAGCAGGAGAAGGTGACCCGCCTCACAGAGAATCTGAGTGCCCTGCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS GCA 90 bp GTTAGCTGCAGCGTGCGGCGCCCCACAGCCCCTAATCACAGTAAATaGTGTGCTTCTCGCTGCAGAACACCTGGTTGGCCAGCCCGGTGC +
Preference number: 5 (lower is better)
Translates to: VSCSVRRPTAPNHSK*CASRCRTPGWPARC
Trigger: GCACCGGGCTGGCCAACCAGGTGTTCTGCAGCGAGAAGCACAGCATTTACTGTGATTAGGGGCTGTGGGGCGCCGCACGCTGCAGCTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCGCTTCCTTGTCCTaGTCCACGGCGGGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYSASLS*STAGPS
Trigger: GCTGGGCCCCGCCGTGGACAAGGACAAGGAAGCGCT...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACAGCTATGTGCCAGGCTaGCAAGGAGAGGGCAAAGCG +
Preference number: 5 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNSYVPG*QGEGKA
Trigger: CGCTTTGCCCTCTCCTTGCAAGCCTGGCACATAGCT...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS TCA 90 bp CCTGGGCCACAGAGGCCAGGCGCTCATTCTCCGACTGCGTGTTGGTaGGGACATTGCGCAACTGCTTCAGCTCCGTCTGCAGCTCTAGCA +
Preference number: 5 (lower is better)
Translates to: PGPQRPGAHSPTACW*GHCATASAPSAALA
Trigger: TGCTAGAGCTGCAGACGGAGCTGAAGCAGTTGCGCAATGTCCTCACCAACACGCAGTCGGAGAATGAGCGCCTGGCCTCTGTGGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS TCA 90 bp GGCACTCAGATTCTCTGTGAGGCGGGTCACCTTCTCCTGCTGTTCTaGCAGGGAGCCCCGCGTGTGCTCCAGCTGCTTCTGTGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: GTQILCEAGHLLLLF*QGAPRVLQLLLCVL
Trigger: CAGGACACACAGAAGCAGCTGGAGCACACGCGGGGCTCCCTGTCAGAACAGCAGGAGAAGGTGACCCGCCTCACAGAGAATCTGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS GCA 90 bp TCCTTCAGCTCCTGGGCCACAGAGGCCAGGCGCTCATTCTCCGACTaGGTGTTGGTGAGGACATTGCGCAACTGCTTCAGCTCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: SFSSWATEARRSFSD*VLVRTLRNCFSSVC
Trigger: GCAGACGGAGCTGAAGCAGTTGCGCAATGTCCTCACCAACACGCAGTCGGAGAATGAGCGCCTGGCCTCTGTGGCCCAGGAGCTGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGGTGGTTTGTGTGTGCTaGTCCAAAGGCCTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWVVCVC*SKGLLE
Trigger: CTCAAGGAGGCCTTTGGACAAGCACACACAAACCAC...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCTTGTCCAGTGGCAGCTaGGCCAGGCCGCCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSLSSGS*ARPPCS
Trigger: TGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACAA...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACGGCGTGGAGGTCTTGTaGTCCAGTGGCAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYGVEVL*SSGSLA
Trigger: GGCCAAGCTGCCACTGGACAACAAGACCTCCACGCC...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GGGGGATCTGGGCCCAGGATGAACACGCAGGGGACATACATGGGCGTGTCCTGGCGAGCTTCCCGGAATTaGTACTCCTTGATGTCATCC +
Preference number: 5 (lower is better)
Translates to: GGSGPRMNTQGTYMGVSWRASRN*YSLMSS
Trigger: GGATGACATCAAGGAGTACAAATTCCGGGAAGCTCG...CCAGGACACGCCCATGTATGTCCCCTGCGTGTTCATCCTGGGCCCAGATCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCATTGTCCAGTGGCAGCTaGGCCAGGCCGCCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: RGVHTACSACPRRSIWFPLSSGS*ARPPCS
Trigger: TGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACAA...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGCTGTCTGCCGCTCCTaGCTGGCCTGCAGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFAVCRS*LACRRR
Trigger: GCGGCGCCTGCAGGCCAGCAAGGAGCGGCAGACAGC...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS TCA 90 bp CCGAGTAGTCCTGCAGCAGACGAGCTTCCCGGAATTTGTACTCCTTaGTGTCATCCCGCAGGCGGCCACGCTGGATCTCCACATTCTGGT +
Preference number: 5 (lower is better)
Translates to: PSSPAADELPGICTP*CHPAGGHAGSPHSG
Trigger: ACCAGAATGTGGAGATCCAGCGTGGCCGCCTGCGGGATGACATCAAGGAGTACAAATTCCGGGAAGCTCGTCTGCTGCAGGACTACTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 90 bp ATCAGGCTCTCCTCCCGGCTCTCTCCGTCAGCAGCCACCTTCTTGTaGTTTGTGTGTGCTTGTCCAAAGGCCTCCTTGAGCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: IRLSSRLSPSAATFL*FVCACPKASLSCSI
Trigger: GATGGAGCAGCTCAAGGAGGCCTTTGGACAAGCACACACAAACCACAAGAAGGTGGCTGCTGACGGAGAGAGCCGGGAGGAGAGCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp CACCGCCGTCCCGCTGCTGCTGGGTTAGTTGAGGTGAAGCAGATGTTAGCTGCAGTGTTGGTGAGGACATaGCGCAACTGCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: HRRPAAAGLVEVKQMLAAVLVRT*RNCFSS
Trigger: GGAGCTGAAGCAGTTGCGCAATGTCCTCACCAACAC...TGCAGCTAACATCTGCTTCACCTCAACTAACCCAGCAGCAGCGGGACGGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAGCCTCGGCATCGTTGTaGGGCTCGGCAGCATCGTCA +
Preference number: 5 (lower is better)
Translates to: RGVHTACSACPRRSIWFPASASL*GSAASS
Trigger: TGACGATGCTGCCGAGCCCAACAACGATGCCGAGGC...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GTCTCAACTCAGGTTCTGCCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGACTCCGGTTGGGTGTCTCATaGTTGCACATGCACACGTGG +
Preference number: 5 (lower is better)
Translates to: VSTQVLPLLGAEGAGPGLRLGVS*LHMHTW
Trigger: CCACGTGTGCATGTGCAACAATGAGACACCCAACCG...GAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCATCGGCCGTCTGCTTGTaGGCCTTGAGCACAGTGCGC +
Preference number: 5 (lower is better)
Translates to: RGVHTACSACPRRSIWFPSAVCL*ALSTVR
Trigger: GCGCACTGTGCTCAAGGCCAACAAGCAGACGGCCGA...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGACCAGGACTCCTCCCTaGGGTTTCCCCACGGGTGCG +
Preference number: 5 (lower is better)
Translates to: AKSLRSMERSYVPGLQGETRTPP*GFPTGA
Trigger: CGCACCCGTGGGGAAACCCAAGGGAGGAGTCCTGGT...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp GTCTCAACTCAGGTTCTGCCCCTTTTGGGTGCTGAGGGAGCAGGACCAGGACTCCAAAGCCCCATGTCTTaGGGACTGAACCCCCTATGG +
Preference number: 5 (lower is better)
Translates to: VSTQVLPLLGAEGAGPGLQSPMS*GLNPLW
Trigger: CCATAGGGGGTTCAGTCCCAAAGACATGGGGCTTTG...GAGTCCTGGTCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTGAGTTGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS GCA 90 bp GCTGCTGCTGGGTTAGTTGAGGTGAAGCAGATGTTAGCTGCAGCGTaGGGCGCCCCACAGCCCCTAATCACAGTAAATGCTGTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: AAAGLVEVKQMLAAA*GAPQPLITVNAVLL
Trigger: GAGAAGCACAGCATTTACTGTGATTAGGGGCTGTGGGGCGCCGCACGCTGCAGCTAACATCTGCTTCACCTCAACTAACCCAGCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS CCA 90 bp TCCCGGAATTTGTACTCCTTGATGTCATCCCGCAGGCGGCCACGCTaGATCTCCACATTCTGGTTGATCTCCTTCAGCTCCTGGGCCACA +
Preference number: 5 (lower is better)
Translates to: SRNLYSLMSSRRRPR*ISTFWLISFSSWAT
Trigger: TGTGGCCCAGGAGCTGAAGGAGATCAACCAGAATGTGGAGATCCAGCGTGGCCGCCTGCGGGATGACATCAAGGAGTACAAATTCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAGGGGTCCCAGTGGCTaGGGTGTCTGCAAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: RGVHTACSACPRRSIWFPRGPSG*GVCKVP
Trigger: AGGGACTTTGCAGACACCCAAGCCACTGGGACCCCT...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp AAGTGGCCCTGGCCCTATGCAAAGCTTTCCCAGCACCGGGCTGGGCTCTGGATAAAGTGGGCTTTTAGGTaGCCCTTCCTTCCTCCTTGT +
Preference number: 5 (lower is better)
Translates to: KWPWPYAKLSQHRAGLWIKWAFR*PFLPPC
Trigger: ACAAGGAGGAAGGAAGGGCAACCTAAAAGCCCACTT...TATCCAGAGCCCAGCCCGGTGCTGGGAAAGCTTTGCATAGGGCCAGGGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCAGGGCCTTGAGCTCATaGCGCAGCTTCATCATGGTC +
Preference number: 5 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSRALSS*RSFIMV
Trigger: GACCATGATGAAGCTGCGCAATGAGCTCAAGGCCCT...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTCTCGGTGTGGCTGGCTaGGTCTTCGGGGCGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTLGVAG*VFGAAL
Trigger: CAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAG...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS TCA 90 bp GGCCATCCAGCGAGACATGCAGGTGGCTGGTGTAGAAGGAGTCATTaGTGCTCATGTAGTGTGACAGCTCCTTGCGCAGGCTGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GHPARHAGGWCRRSH*CSCSVTAPCAGCSS
Trigger: AGAAGAACAGCCTGCGCAAGGAGCTGTCACACTACATGAGCATCAATGACTCCTTCTACACCAGCCACCTGCATGTCTCGCTGGATGGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCACGGAATTTGTACTCCTaGATGTCATCCCGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: RGVHTACSACPRRSIWFPRNLYS*MSSRRR
Trigger: CCGCCTGCGGGATGACATCAAGGAGTACAAATTCCG...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GAAGATGCTTTCATCACACATCTGCTGCAAGAATGTGCAGCTCTATCCCCACCTCCGTGCTCAAAGCCATaGACCAGGGCCTCGGCATCG +
Preference number: 5 (lower is better)
Translates to: EDAFITHLLQECAALSPPPCSKP*TRASAS
Trigger: CGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACGG...AGGTGGGGATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAGCATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTCCGTGCTCAAAGCCATaGACCAGGGCCTCGGCATCG +
Preference number: 5 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCPCSKP*TRASAS
Trigger: CGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACGG...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCTCCAGCATGACACGGTaGGGTGTCTCATTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSSSMTR*GVSLLH
Trigger: GTGCAACAATGAGACACCCAACCGTGTCATGCTGGA...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTAGCGCTTCCTTGTCCTaGTCCACGGCGGGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFSASLS*STAGPS
Trigger: GCTGGGCCCCGCCGTGGACAAGGACAAGGAAGCGCT...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ACTCGAATGCCTCTTCCGCATGAGAGACAAGGCAAGCAGCCTGCAGGAGAGAAGTGGCGTTCATACAGCTaGCTCAGCTTGTCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: TRMPLPHERQGKQPAGEKWRSYS*LSLSQK
Trigger: CTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCA...CTTCTCTCCTGCAGGCTGCTTGCCTTGTCTCTCATGCGGAAGAGGCATTCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp ACGCGCAGGGCAGAGAGCTGTGGGAGGGGGCAACACGGTCTCTCACCAGGTAACGTCTCGCTTTCACATTaGCAAAGAATACTATGGCTA +
Preference number: 5 (lower is better)
Translates to: TRRAESCGRGQHGLSPGNVSLSH*QRILWL
Trigger: TAGCCATAGTATTCTTTGCAAATGTGAAAGCGAGAC...GTTACCTGGTGAGAGACCGTGTTGCCCCCTCCCACAGCTCTCTGCCCTGCGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS TCA 90 bp ATGCAGGTGGCTGGTGTAGAAGGAGTCATTGATGCTCATGTAGTGTaGCAGCTCCTTGCGCAGGCTGTTCTTCTGTTCGCGCTCCGTCTT +
Preference number: 5 (lower is better)
Translates to: MQVAGVEGVIDAHVV*QLLAQAVLLFALRL
Trigger: AAGACGGAGCGCGAACAGAAGAACAGCCTGCGCAAGGAGCTGTCACACTACATGAGCATCAATGACTCCTTCTACACCAGCCACCTGCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 90 bp TCCTCCAGACGCTTGATCTCATGCTTGAGGCCCTCAAACTCCACCTaGTTCTGTCTGAGCACAGACACTTGCTTCTGCAGGCTGATGTTC +
Preference number: 5 (lower is better)
Translates to: SSRRLISCLRPSNST*FCLSTDTCFCRLMF
Trigger: GAACATCAGCCTGCAGAAGCAAGTGTCTGTGCTCAGACAGAACCAGGTGGAGTTTGAGGGCCTCAAGCATGAGATCAAGCGTCTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp AGGCAGGTGTGGATGGAGCCTCTGGAAATGGGAGAACCCTACAGCTACCTTTCCTCAGCAGCCACCTTCTaGTGGTTTGTGTGTGCTTGT +
Preference number: 5 (lower is better)
Translates to: RQVWMEPLEMGEPYSYLSSAATF*WFVCAC
Trigger: ACAAGCACACACAAACCACAAGAAGGTGGCTGCTGA...GGAAAGGTAGCTGTAGGGTTCTCCCATTTCCAGAGGCTCCATCCACACCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTCGCTCTGAGATCTCCTaGAGGCGGATGGCATCCTCC +
Preference number: 5 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTRSEIS*RRMASS
Trigger: GGAGGATGCCATCCGCCTCAAGGAGATCTCAGAGCG...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GAAGATGCTTTCATCACACATCTGCTGCAAGAATGTGCAGCTCTATCCCCACCTGTCTGCTTGTTGGCCTaGAGCACAGTGCGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: EDAFITHLLQECAALSPPVCLLA*STVRSV
Trigger: CACGCTGCGCACTGTGCTCAAGGCCAACAAGCAGAC...AGGTGGGGATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAGCATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTTACTTGCTCTTCAGGTaGGCAAGGGCCACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCYLLFR*ARATSA
Trigger: GGCCGAGGTGGCCCTTGCCAACCTGAAGAGCAAGTA...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GAAGATGCTTTCATCACACATCTGCTGCAAGAATGTGCAGCTCTATCCCCACCTGCTCCTGAGGGGGCTTaGAGGAGTGAGAAGCGACAC +
Preference number: 5 (lower is better)
Translates to: EDAFITHLLQECAALSPPAPEGA*RSEKRH
Trigger: GTGTCGCTTCTCACTCCTCAAAGCCCCCTCAGGAGC...AGGTGGGGATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAGCATCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCATGGCGTTCATACAGCTaGCTCAGCTTGTCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: RGVHTACSACPRRSIWFPWRSYS*LSLSQK
Trigger: CTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCA...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp AAGTGGCCCTGGCCCTATGCAAAGCTTTCCCAGCACCGGGCTGGGCTCTGGATAGGATGTAGACCTGGTTaGCTAAGGAGTTTTAATGAG +
Preference number: 5 (lower is better)
Translates to: KWPWPYAKLSQHRAGLWIGCRPG*LRSFNE
Trigger: CTCATTAAAACTCCTTAGCAAACCAGGTCTACATCC...TATCCAGAGCCCAGCCCGGTGCTGGGAAAGCTTTGCATAGGGCCAGGGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTTTGGGCGTGGAGGTCTaGTTGTCCAGTGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCLGVEV*LSSGSL
Trigger: CAAGCTGCCACTGGACAACAAGACCTCCACGCCCAA...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTGCGAGGCCCTCCTTCTaGGGCGTGGAGGTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFARPSF*GVEVLL
Trigger: CAACAAGACCTCCACGCCCAAGAAGGAGGGCCTCGC...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTTCCTCCTTGAGGGCCTaGAGCTCATTGCGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTSSLRA*SSLRSF
Trigger: GAAGCTGCGCAATGAGCTCAAGGCCCTCAAGGAGGA...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCATGCTCTTCTCTGGGCTaGGGGAAGAAATTCTGCACT +
Preference number: 5 (lower is better)
Translates to: RGVHTACSACPRRSIWFPCSSLG*GKKFCT
Trigger: AGTGCAGAATTTCTTCCCCAAGCCCAGAGAAGAGCA...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGTGGGCTTTTAGGTaGCCCTTCCTTCCTCCTTGT +
Preference number: 5 (lower is better)
Translates to: RGVHTACSACPRRSIWFPKWAFR*PFLPPC
Trigger: ACAAGGAGGAAGGAAGGGCAACCTAAAAGCCCACTT...TGGGAACCAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp CTGAAAACGGGAGAAAAGAGAGCGTTAGAAAGCGGTCATCTGTCGCTTCCTGTTCGGAATTTGTACTCCTaGATGTCATCCCGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: LKTGEKRALESGHLSLPVRNLYS*MSSRRR
Trigger: CCGCCTGCGGGATGACATCAAGGAGTACAAATTCCG...AACAGGAAGCGACAGATGACCGCTTTCTAACGCTCTCTTTTCTCCCGTTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTGCATCGTCACTGAACTaGAGGCCATCCAGCGAGACA +
Preference number: 5 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFASSLN*RPSSET
Trigger: TGTCTCGCTGGATGGCCTCAAGTTCAGTGACGATGC...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATGCTGTCTGCCGCTCCTaGCTGGCCTGCAGGCGCCGC +
Preference number: 5 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHAVCRS*LACRRR
Trigger: GCGGCGCCTGCAGGCCAGCAAGGAGCGGCAGACAGC...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTCGGTTGGGTGTCTCATaGTTGCACATGCACACGTGG +
Preference number: 5 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCRLGVS*LHMHTW
Trigger: CCACGTGTGCATGTGCAACAATGAGACACCCAACCG...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTTCCATAAGCGCTTCCTaGTCCTTGTCCACGGCGGGG +
Preference number: 5 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFSISAS*SLSTAG
Trigger: CCCCGCCGTGGACAAGGACAAGGAAGCGCTTATGGA...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTAGGGCCTTGAGCTCATaGCGCAGCTTCATCATGGTC +
Preference number: 5 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFRALSS*RSFIMV
Trigger: GACCATGATGAAGCTGCGCAATGAGCTCAAGGCCCT...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATGTCTTCGGGGCGGCTTaGGCACGGCCACGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHVFGAA*ARPRRV
Trigger: GACCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGAC...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGTTTCCTCTTTCTCTGTaGCCATCCCCCAGATTGCAC +
Preference number: 5 (lower is better)
Translates to: AKSLRSMERSYVPGLQGEFPLSL*PSPRLH
Trigger: GTGCAATCTGGGGGATGGCAACAGAGAAAGAGGAAA...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTTTGGGTGTCTCATTGTaGCACATGCACACGTGGTGG +
Preference number: 5 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFLGVSL*HMHTWW
Trigger: CCACCACGTGTGCATGTGCAACAATGAGACACCCAA...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTAGCAGCGACTTCAGCTaGAGGATCTCCTCCATAAGC +
Preference number: 5 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTSSDFS*RISSIS
Trigger: GCTTATGGAGGAGATCCTCAAGCTGAAGTCGCTGCT...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTAGCAGCGACTTCAGCTaGAGGATCTCCTCCATAAGC +
Preference number: 5 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFSSDFS*RISSIS
Trigger: GCTTATGGAGGAGATCCTCAAGCTGAAGTCGCTGCT...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCACTGTGTAAAGGTTCCTaGGCAGGAGAACATGCATAT +
Preference number: 5 (lower is better)
Translates to: ALLIPSALHKRGVHTACSLCKGS*AGEHAY
Trigger: ATATGCATGTTCTCCTGCCAAGGAACCTTTACACAG...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTTTCTCCGACTGCGTGTaGGTGAGGACATTGCGCAAC +
Preference number: 5 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFFSDCV*VRTLRN
Trigger: GTTGCGCAATGTCCTCACCAACACGCAGTCGGAGAA...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GAAGATGCTTTCATCACACATCTGCTGCAAGAATGTGCAGCTCTATCCCCACCTATCTCCACATTCTGGTaGATCTCCTTCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: EDAFITHLLQECAALSPPISTFW*ISFSSW
Trigger: CCAGGAGCTGAAGGAGATCAACCAGAATGTGGAGAT...AGGTGGGGATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAGCATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp TTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTTGTCCCAGAAGGTCCATTTATCTCCACATTCTGGTaGATCTCCTTCAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: FTNVAFIQLAQLVPEGPFISTFW*ISFSSW
Trigger: CCAGGAGCTGAAGGAGATCAACCAGAATGTGGAGAT...AAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGGGCGTGGAGGTCTTGTaGTCCAGTGGCAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQGVEVL*SSGSLA
Trigger: GGCCAAGCTGCCACTGGACAACAAGACCTCCACGCC...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp CTCAGCTTGTCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTTGGATCTCAGAGATGTaGAGCTCACTGAGTAGGTCG +
Preference number: 5 (lower is better)
Translates to: LSLSQKVHLVPKAHSRFCWISEM*SSLSRS
Trigger: CGACCTACTCAGTGAGCTCAACATCTCTGAGATCCA...ACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGACAAGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGTCGGCCGTCTGCTTGTaGGCCTTGAGCACAGTGCGC +
Preference number: 5 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQSAVCL*ALSTVR
Trigger: GCGCACTGTGCTCAAGGCCAACAAGCAGACGGCCGA...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp CTGAAAACGGGAGAAAAGAGAGCGTTAGAAAGCGGTCATCTGTCGCTTCCTGTTGGTCTGGCCAGGCACTaGGAAAGCTTTTCTCATGAA +
Preference number: 5 (lower is better)
Translates to: LKTGEKRALESGHLSLPVGLARH*ESFSHE
Trigger: TTCATGAGAAAAGCTTTCCAAGTGCCTGGCCAGACC...AACAGGAAGCGACAGATGACCGCTTTCTAACGCTCTCTTTTCTCCCGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CACAGCGTCGGCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCACACTCAAGGTTTaGTGTTTGCTTTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: HSVGPPDTLSSSQTWRSYSTLKV*CLLSFS
Trigger: AGAAAATGAAAGCAAACACAAAACCTTGAGTGTGCT...GTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGCCGACGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCGCTTTTGAGAATGATCTGTGCTGGGACACCTCCCTTAACTGATGAAGGCACTTCCCAGAAGGTCCATTaGGTTCCCAAAGCACACTCA +
Preference number: 5 (lower is better)
Translates to: SLLRMICAGTPPLTDEGTSQKVH*VPKAHS
Trigger: TGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA...AGTGCCTTCATCAGTTAAGGGAGGTGTCCCAGCACAGATCATTCTCAAAAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp CTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGCTCTGTGTAAAGGTTCCTaGGCAGGAGAACATGCATAT +
Preference number: 5 (lower is better)
Translates to: LLIPSALHKRGVHTACSALCKGS*AGEHAY
Trigger: ATATGCATGTTCTCCTGCCAAGGAACCTTTACACAG...AGCTGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGCGCTCTGAGATCTCCTaGAGGCGGATGGCATCCTCC +
Preference number: 5 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQRSEIS*RRMASS
Trigger: GGAGGATGCCATCCGCCTCAAGGAGATCTCAGAGCG...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTAGGGCCTCGGCATCGTaGTTGGGCTCGGCAGCATCG +
Preference number: 5 (lower is better)
Translates to: MITNKKVLKENTLKIDDCRASAS*LGSAAS
Trigger: CGATGCTGCCGAGCCCAACAACGATGCCGAGGCCCT...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTACTCGGTGTGGCTGGCTaGGTCTTCGGGGCGGCTTTG +
Preference number: 5 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILLGVAG*VFGAAL
Trigger: CAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAG...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGCAGGTTCTGCCCCTTTaGGGTGCTGAGGGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQQVLPL*GAEGAG
Trigger: TCCTGCTCCCTCAGCACCCAAAAGGGGCAGAACCTG...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCGCCCTTCCTTCCTCCTaGTGGGCCACGAGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: QAREDIMSRFHICKEYYGALPSS*WATRGK
Trigger: CTTCCCTCTCGTGGCCCACAAGGAGGAAGGAAGGGC...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GCCCTCCTGATACCCTCAGCTCTTCACAAACGTGGCGTTCATACAGCTTGCTCAGTCTCGCTTTCACATTaGCAAAGAATACTATGGCTA +
Preference number: 5 (lower is better)
Translates to: ALLIPSALHKRGVHTACSVSLSH*QRILWL
Trigger: TAGCCATAGTATTCTTTGCAAATGTGAAAGCGAGAC...TGAGCAAGCTGTATGAACGCCACGTTTGTGAAGAGCTGAGGGTATCAGGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCCCAGAAGGTCCATTTGGTTCCCAAAGCACACTCAAGGTTTTGTGTTTGCTTTCCACCTTCTTGTGGTTaGTGTGTGCTTGTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: SQKVHLVPKAHSRFCVCFPPSCG*CVLVQR
Trigger: CCTTTGGACAAGCACACACAAACCACAAGAAGGTGG...AAAGCAAACACAAAACCTTGAGTGTGCTTTGGGAACCAAATGGACCTTCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTGCCTCGGCATCGTTGTaGGGCTCGGCAGCATCGTCA +
Preference number: 5 (lower is better)
Translates to: MITNKKVLKENTLKIDDCASASL*GSAASS
Trigger: TGACGATGCTGCCGAGCCCAACAACGATGCCGAGGC...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GAAGATGCTTTCATCACACATCTGCTGCAAGAATGTGCAGCTCTATCCCCACCTTTCTCATTCTCATACTaGCTCTTCAGGTTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: EDAFITHLLQECAALSPPFSFSY*LFRLAR
Trigger: CCTTGCCAACCTGAAGAGCAAGTATGAGAATGAGAA...AGGTGGGGATAGAGCTGCACATTCTTGCAGCAGATGTGTGATGAAAGCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCGTGGCTGCGTCCTCCTaGAGGGCCTTGAGCTCATTG +
Preference number: 5 (lower is better)
Translates to: QAREDIMSRFHICKEYYGVAASS*RALSSL
Trigger: CAATGAGCTCAAGGCCCTCAAGGAGGACGCAGCCAC...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATTCCATAAGCGCTTCCTaGTCCTTGTCCACGGCGGGG +
Preference number: 5 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHSISAS*SLSTAG
Trigger: CCCCGCCGTGGACAAGGACAAGGAAGCGCTTATGGA...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTGTCTGCTTGTTGGCCTaGAGCACAGTGCGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: MITNKKVLKENTLKIDDCVCLLA*STVRSV
Trigger: CACGCTGCGCACTGTGCTCAAGGCCAACAAGCAGAC...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAACCTCGGCCGTCTGCTaGTTGGCCTTGAGCACAGTG +
Preference number: 5 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILTSAVC*LALSTV
Trigger: CACTGTGCTCAAGGCCAACAAGCAGACGGCCGAGGT...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATACCTCGGCCGTCTGCTaGTTGGCCTTGAGCACAGTG +
Preference number: 5 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHTSAVC*LALSTV
Trigger: CACTGTGCTCAAGGCCAACAAGCAGACGGCCGAGGT...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTTACTTGCTCTTCAGGTaGGCAAGGGCCACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: MITNKKVLKENTLKIDDCYLLFR*ARATSA
Trigger: GGCCGAGGTGGCCCTTGCCAACCTGAAGAGCAAGTA...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp CAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATGGCTCCTCCTTGAGGGCCTaGAGCTCATTGCGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QAREDIMSRFHICKEYYGSSLRA*SSLRSF
Trigger: GAAGCTGCGCAATGAGCTCAAGGCCCTCAAGGAGGA...GCCATAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAGTGGCTGCGTCCTCCTaGAGGGCCTTGAGCTCATTG +
Preference number: 5 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILVAASS*RALSSL
Trigger: CAATGAGCTCAAGGCCCTCAAGGAGGACGCAGCCAC...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAAACCCAGCCAAGCCCTaGGTGGCTCAGACTTCAGGC +
Preference number: 5 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILNPAKP*VAQTSG
Trigger: GCCTGAAGTCTGAGCCACCAAGGGCTTGGCTGGGTT...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp CCCACTGTTCCTATGCGCACTGGCTTTGTAGGCATTCACATCATATGTCTGTGTGGATGTAGACCTGGTTaGCTAAGGAGTTTTAATGAG +
Preference number: 5 (lower is better)
Translates to: PTVPMRTGFVGIHIICLCGCRPG*LRSFNE
Trigger: CTCATTAAAACTCCTTAGCAAACCAGGTCTACATCC...ACACAGACATATGATGTGAATGCCTACAAAGCCAGTGCGCATAGGAACAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GCAAAGTCCCTTAGGAGTATGGAGAGAAGCTATGTGCCAGGCTTGCAAGGAGAGAGTACTCAGACATCATaGCAAATAAATACCCCATAC +
Preference number: 5 (lower is better)
Translates to: AKSLRSMERSYVPGLQGESTQTS*QINTPY
Trigger: GTATGGGGTATTTATTTGCAATGATGTCTGAGTACT...CTCTCCTTGCAAGCCTGGCACATAGCTTCTCTCCATACTCCTAAGGGACTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS-3UTR CAA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTTTGGGCGTGGAGGTCTaGTTGTCCAGTGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: MITNKKVLKENTLKIDDCLGVEV*LSSGSL
Trigger: CAAGCTGCCACTGGACAACAAGACCTCCACGCCCAA...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGCTTCCCTGCTCGCTTTaGAGAATGATCTGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQLPCSL*RMICAG
Trigger: CCCAGCACAGATCATTCTCAAAAGCGAGCAGGGAAG...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATGTGTTGGTGAGGACATaGCGCAACTGCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHVLVRT*RNCFSS
Trigger: GGAGCTGAAGCAGTTGCGCAATGTCCTCACCAACAC...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATTCTCCGACTGCGTGTaGGTGAGGACATTGCGCAAC +
Preference number: 5 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILFSDCV*VRTLRN
Trigger: GTTGCGCAATGTCCTCACCAACACGCAGTCGGAGAA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTAGCATCGTCACTGAACTaGAGGCCATCCAGCGAGACA +
Preference number: 5 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILASSLN*RPSSET
Trigger: TGTCTCGCTGGATGGCCTCAAGTTCAGTGACGATGC...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp TCACAACGTCCTAAAACCCAGAAAATTCTGGAATTTGTAGGTAATACTACTCATGTGGTTTGTGTGTGCTaGTCCAAAGGCCTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: SQRPKTQKILEFVGNTTHVVCVC*SKGLLE
Trigger: CTCAAGGAGGCCTTTGGACAAGCACACACAAACCAC...ATGAGTAGTATTACCTACAAATTCCAGAATTTTCTGGGTTTTAGGACGTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATTGGGTGTCTCATTGTaGCACATGCACACGTGGTGG +
Preference number: 5 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILLGVSL*HMHTWW
Trigger: CCACCACGTGTGCATGTGCAACAATGAGACACCCAA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCTCCAGCATGACACGGTaGGGTGTCTCATTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: ASKESLTNRILHNDCFLSSSMTR*GVSLLH
Trigger: GTGCAACAATGAGACACCCAACCGTGTCATGCTGGA...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp GCAAGTAAAGAATCACTGACTAACAGAATTTTGCACAATGACTGTTTTCTTTCCCCACCTTCTTGTGGTTaGTGTGTGCTTGTCCAAAGG +
Preference number: 5 (lower is better)
Translates to: ASKESLTNRILHNDCFLSPPSCG*CVLVQR
Trigger: CCTTTGGACAAGCACACACAAACCACAAGAAGGTGG...GGAAAGAAAACAGTCATTGTGCAAAATTCTGTTAGTCAGTGATTCTTTACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTCGAGCTTCCCGGAATTaGTACTCCTTGATGTCATCC +
Preference number: 5 (lower is better)
Translates to: MITNKKVLKENTLKIDDCRASRN*YSLMSS
Trigger: GGATGACATCAAGGAGTACAAATTCCGGGAAGCTCG...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATACAGCTTGCTCAGCTaGTCCCAGAAGGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILYSLLS*SQKVHL
Trigger: CAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTTACAGCTTGCTCAGCTaGTCCCAGAAGGTCCATTTG +
Preference number: 5 (lower is better)
Translates to: MITNKKVLKENTLKIDDCYSLLS*SQKVHL
Trigger: CAAATGGACCTTCTGGGACAAGCTGAGCAAGCTGTA...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ACACCAAGCAAGAGAAGATATAATGTCTCGCTTTCACATTTGCAAAGAATACTATTCTCATTCTCATACTaGCTCTTCAGGTTGGCAAGG +
Preference number: 5 (lower is better)
Translates to: TPSKRRYNVSLSHLQRILFSFSY*LFRLAR
Trigger: CCTTGCCAACCTGAAGAGCAAGTATGAGAATGAGAA...TAGTATTCTTTGCAAATGTGAAAGCGAGACATTATATCTTCTCTTGCTTGGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp AAATCGACGACTGTAGAATTTTCTAAGTGTACCACAATTTGGCACAACAACCAGAGTACTCAGACATCATaGCAAATAAATACCCCATAC +
Preference number: 5 (lower is better)
Translates to: KSTTVEFSKCTTIWHNNQSTQTS*QINTPY
Trigger: GTATGGGGTATTTATTTGCAATGATGTCTGAGTACT...CTGGTTGTTGTGCCAAATTGTGGTACACTTAGAAAATTCTACAGTCGTCGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS-3UTR CAA 90 bp ATGATTACTAACAAAAAGGTGTTGAAAGAGAACACCCTAAAAATCGACGACTGTAGCACACTCAAGGTTTaGTGTTTGCTTTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: MITNKKVLKENTLKIDDCSTLKV*CLLSFS
Trigger: AGAAAATGAAAGCAAACACAAAACCTTGAGTGTGCT...ACAGTCGTCGATTTTTAGGGTGTTCTCTTTCAACACCTTTTTGTTAGTAATCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 72 bp CGCTCGGTGTGGCTGGCTTGGTCTTCGGGGCGGCTTTaGCACGGCCACGCCGGGTCTGCTCATGGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: RSVWLAWSSGRL*HGHAGSAHGPA
Trigger: AGCTGGACCATGAGCAGACCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS CCA 72 bp CCTGGTTGGCCAGCCCGGTGCCCTCGGCCCTGTCGCTaGCACAGGCACAGGTGTGACTTACGCTCGGTGTGG +
Preference number: 6 (lower is better)
Translates to: PGWPARCPRPCR*HRHRCDLRSVW
Trigger: CCACACCGAGCGTAAGTCACACCTGTGCCTGTGCCAGCGACAGGGCCGAGGGCACCGGGCTGGCCAACCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS CCA 72 bp GGCTCGGTGTGGCTGGCTTGGTCTTCGGGGCGGCTTTaGCACGGCCACGCCGGGTCTGCTCATGGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: GSVWLAWSSGRL*HGHAGSAHGPA
Trigger: AGCTGGACCATGAGCAGACCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375512.3
CDS CCA 72 bp CCTGGCAGCTACTCTACAGGCTCGGTGTGGCTGGCTTaGTCTTCGGGGCGGCTTTGGCACGGCCACGCCGGG +
Preference number: 6 (lower is better)
Translates to: PGSYSTGSVWLA*SSGRLWHGHAG
Trigger: CCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAGCCTGTAGAGTAGCTGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375512.3
CDS CAA 72 bp GGCGGTGCGAGGCCCTCCTTCTTGGGCGTGGAGGTCTaGTTGTCCAGTGGCAGCTTGGCCAGGCCGCCGTGC +
Preference number: 6 (lower is better)
Translates to: GGARPSFLGVEV*LSSGSLARPPC
Trigger: GCACGGCGGCCTGGCCAAGCTGCCACTGGACAACAAGACCTCCACGCCCAAGAAGGAGGGCCTCGCACCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 72 bp AGGCACAGGTGTGACTTACGCTCGGTGTGGCTGGCTTaGTCTTCGGGGCGGCTTTGGCACGGCCACGCCGGG +
Preference number: 6 (lower is better)
Translates to: RHRCDLRSVWLA*SSGRLWHGHAG
Trigger: CCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAGCGTAAGTCACACCTGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS CAA 72 bp TCCTGGCAGCTACTCTACAGGCTCGGTGTGGCTGGCTaGGTCTTCGGGGCGGCTTTGGCACGGCCACGCCGG +
Preference number: 6 (lower is better)
Translates to: SWQLLYRLGVAG*VFGAALARPRR
Trigger: CCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAGCCTGTAGAGTAGCTGCCAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375512.3
CDS CAA 90 bp GGGGAGGGCGGTGCGAGGCCCTCCTTCTTGGGCGTGGAGGTCTTGTaGTCCAGTGGCAGCTTGGCCAGGCCGCCGTGCTCAAAGCCATTG +
Preference number: 6 (lower is better)
Translates to: GEGGARPSFLGVEVL*SSGSLARPPCSKPL
Trigger: CAATGGCTTTGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACAACAAGACCTCCACGCCCAAGAAGGAGGGCCTCGCACCGCCCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 90 bp CTACTCTACAGGCTCGGTGTGGCTGGCTTGGTCTTCGGGGCGGCTTaGGCACGGCCACGCCGGGTCTGCTCATGGTCCAGCTCGAGCAGC +
Preference number: 6 (lower is better)
Translates to: LLYRLGVAGLVFGAA*ARPRRVCSWSSSSS
Trigger: GCTGCTCGAGCTGGACCATGAGCAGACCCGGCGTGGCCGTGCCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAGCCTGTAGAGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375512.3
CDS TCA 72 bp GTGGCAGCTTGGCCAGGCCGCCGTGCTCAAAGCCATTaGCCAGGGCCTCGGCATCGTTGTTGGGCTCGGCAG +
Preference number: 6 (lower is better)
Translates to: VAAWPGRRAQSH*PGPRHRCWARQ
Trigger: CTGCCGAGCCCAACAACGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACGGCGGCCTGGCCAAGCTGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS TCA 72 bp GTGCCCTCGGCCCTGTCGCTGGCACAGGCACAGGTGTaGCTTACGCTCGGTGTGGCTGGCTTGGTCTTCGGG +
Preference number: 6 (lower is better)
Translates to: VPSALSLAQAQV*LTLGVAGLVFG
Trigger: CCCGAAGACCAAGCCAGCCACACCGAGCGTAAGTCACACCTGTGCCTGTGCCAGCGACAGGGCCGAGGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS CCA 72 bp CGCTGGCACAGGCACAGGTGTGACTTACGCTCGGTGTaGCTGGCTTGGTCTTCGGGGCGGCTTTGGCACGGC +
Preference number: 6 (lower is better)
Translates to: RWHRHRCDLRSV*LAWSSGRLWHG
Trigger: GCCGTGCCAAAGCCGCCCCGAAGACCAAGCCAGCCACACCGAGCGTAAGTCACACCTGTGCCTGTGCCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS CAA 72 bp GGTGCGAGGCCCTCCTTCTTGGGCGTGGAGGTCTTGTaGTCCAGTGGCAGCTTGGCCAGGCCGCCGTGCTCA +
Preference number: 6 (lower is better)
Translates to: GARPSFLGVEVL*SSGSLARPPCS
Trigger: TGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACAACAAGACCTCCACGCCCAAGAAGGAGGGCCTCGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 72 bp AGTGGCAGCTTGGCCAGGCCGCCGTGCTCAAAGCCATaGACCAGGGCCTCGGCATCGTTGTTGGGCTCGGCA +
Preference number: 6 (lower is better)
Translates to: SGSLARPPCSKP*TRASASLLGSA
Trigger: TGCCGAGCCCAACAACGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACGGCGGCCTGGCCAAGCTGCCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 90 bp AGGCCCTCCTTCTTGGGCGTGGAGGTCTTGTTGTCCAGTGGCAGCTaGGCCAGGCCGCCGTGCTCAAAGCCATTGACCAGGGCCTCGGCA +
Preference number: 6 (lower is better)
Translates to: RPSFLGVEVLLSSGS*ARPPCSKPLTRASA
Trigger: TGCCGAGGCCCTGGTCAATGGCTTTGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACAACAAGACCTCCACGCCCAAGAAGGAGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS TCA 72 bp TGGCCTGCAGGCGCCGCAGGGCACTCAGATTCTCTGTaGGGCGGGTCACCTTCTCCTGCTGTTCTGACAGGG +
Preference number: 6 (lower is better)
Translates to: WPAGAAGHSDSL*GGSPSPAVLTG
Trigger: CCCTGTCAGAACAGCAGGAGAAGGTGACCCGCCTCACAGAGAATCTGAGTGCCCTGCGGCGCCTGCAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 72 bp GCAGCTCTAGCACCTTCCGCACGTAGTACTGCTCCTTaGAGGCCGACTCCTGGATCAGGCTCTCCTCCCGGC +
Preference number: 6 (lower is better)
Translates to: AALAPSARSTAP*RPTPGSGSPPG
Trigger: GCCGGGAGGAGAGCCTGATCCAGGAGTCGGCCTCCAAGGAGCAGTACTACGTGCGGAAGGTGCTAGAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 90 bp GCCAGGCCGCCGTGCTCAAAGCCATTGACCAGGGCCTCGGCATCGTaGTTGGGCTCGGCAGCATCGTCACTGAACTTGAGGCCATCCAGC +
Preference number: 6 (lower is better)
Translates to: ARPPCSKPLTRASAS*LGSAASSLNLRPSS
Trigger: GCTGGATGGCCTCAAGTTCAGTGACGATGCTGCCGAGCCCAACAACGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACGGCGGCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 90 bp AGGCCGCCGTGCTCAAAGCCATTGACCAGGGCCTCGGCATCGTTGTaGGGCTCGGCAGCATCGTCACTGAACTTGAGGCCATCCAGCGAG +
Preference number: 6 (lower is better)
Translates to: RPPCSKPLTRASASL*GSAASSLNLRPSSE
Trigger: CTCGCTGGATGGCCTCAAGTTCAGTGACGATGCTGCCGAGCCCAACAACGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACGGCGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 90 bp TTGTTGTCCAGTGGCAGCTTGGCCAGGCCGCCGTGCTCAAAGCCATaGACCAGGGCCTCGGCATCGTTGTTGGGCTCGGCAGCATCGTCA +
Preference number: 6 (lower is better)
Translates to: LLSSGSLARPPCSKP*TRASASLLGSAASS
Trigger: TGACGATGCTGCCGAGCCCAACAACGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACAACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS GCA 72 bp GTCTTGTTGTCCAGTGGCAGCTTGGCCAGGCCGCCGTaGTCAAAGCCATTGACCAGGGCCTCGGCATCGTTG +
Preference number: 6 (lower is better)
Translates to: VLLSSGSLARPP*SKPLTRASASL
Trigger: CAACGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACAACAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS GCA 72 bp GCACTCAGATTCTCTGTGAGGCGGGTCACCTTCTCCTaGTGTTCTGACAGGGAGCCCCGCGTGTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: ALRFSVRRVTFS*CSDREPRVCSS
Trigger: GCTGGAGCACACGCGGGGCTCCCTGTCAGAACAGCAGGAGAAGGTGACCCGCCTCACAGAGAATCTGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 72 bp GCCCTCCTTCTTGGGCGTGGAGGTCTTGTTGTCCAGTaGCAGCTTGGCCAGGCCGCCGTGCTCAAAGCCATT +
Preference number: 6 (lower is better)
Translates to: ALLLGRGGLVVQ*QLGQAAVLKAI
Trigger: AATGGCTTTGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACAACAAGACCTCCACGCCCAAGAAGGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 90 bp AGCTCCTGGGCCACAGAGGCCAGGCGCTCATTCTCCGACTGCGTGTaGGTGAGGACATTGCGCAACTGCTTCAGCTCCGTCTGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SSWATEARRSFSDCV*VRTLRNCFSSVCSS
Trigger: AGAGCTGCAGACGGAGCTGAAGCAGTTGCGCAATGTCCTCACCAACACGCAGTCGGAGAATGAGCGCCTGGCCTCTGTGGCCCAGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS TCA 72 bp ATTCTCTGTGAGGCGGGTCACCTTCTCCTGCTGTTCTaGCAGGGAGCCCCGCGTGTGCTCCAGCTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: ILCEAGHLLLLF*QGAPRVLQLLL
Trigger: CAGAAGCAGCTGGAGCACACGCGGGGCTCCCTGTCAGAACAGCAGGAGAAGGTGACCCGCCTCACAGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS GCA 72 bp TCCTGGGCCACAGAGGCCAGGCGCTCATTCTCCGACTaGGTGTTGGTGAGGACATTGCGCAACTGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SWATEARRSFSD*VLVRTLRNCFS
Trigger: GCTGAAGCAGTTGCGCAATGTCCTCACCAACACGCAGTCGGAGAATGAGCGCCTGGCCTCTGTGGCCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 72 bp GCCACAGAGGCCAGGCGCTCATTCTCCGACTGCGTGTaGGTGAGGACATTGCGCAACTGCTTCAGCTCCGTC +
Preference number: 6 (lower is better)
Translates to: ATEARRSFSDCV*VRTLRNCFSSV
Trigger: GACGGAGCTGAAGCAGTTGCGCAATGTCCTCACCAACACGCAGTCGGAGAATGAGCGCCTGGCCTCTGTGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 72 bp TTCTTGGGCGTGGAGGTCTTGTTGTCCAGTGGCAGCTaGGCCAGGCCGCCGTGCTCAAAGCCATTGACCAGG +
Preference number: 6 (lower is better)
Translates to: FLGVEVLLSSGS*ARPPCSKPLTR
Trigger: CCTGGTCAATGGCTTTGAGCACGGCGGCCTGGCCAAGCTGCCACTGGACAACAAGACCTCCACGCCCAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS TCA 72 bp CAGAGGCCAGGCGCTCATTCTCCGACTGCGTGTTGGTaGGGACATTGCGCAACTGCTTCAGCTCCGTCTGCA +
Preference number: 6 (lower is better)
Translates to: QRPGAHSPTACW*GHCATASAPSA
Trigger: TGCAGACGGAGCTGAAGCAGTTGCGCAATGTCCTCACCAACACGCAGTCGGAGAATGAGCGCCTGGCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS TCA 72 bp CCTGCAGCAGACGAGCTTCCCGGAATTTGTACTCCTTaGTGTCATCCCGCAGGCGGCCACGCTGGATCTCCA +
Preference number: 6 (lower is better)
Translates to: PAADELPGICTP*CHPAGGHAGSP
Trigger: TGGAGATCCAGCGTGGCCGCCTGCGGGATGACATCAAGGAGTACAAATTCCGGGAAGCTCGTCTGCTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS GCA 72 bp AGCGTGCGGCGCCCCACAGCCCCTAATCACAGTAAATaGTGTGCTTCTCGCTGCAGAACACCTGGTTGGCCA +
Preference number: 6 (lower is better)
Translates to: SVRRPTAPNHSK*CASRCRTPGWP
Trigger: TGGCCAACCAGGTGTTCTGCAGCGAGAAGCACAGCATTTACTGTGATTAGGGGCTGTGGGGCGCCGCACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS CAA 72 bp TCCTGCAGCAGACGAGCTTCCCGGAATTTGTACTCCTaGATGTCATCCCGCAGGCGGCCACGCTGGATCTCC +
Preference number: 6 (lower is better)
Translates to: SCSRRASRNLYS*MSSRRRPRWIS
Trigger: GGAGATCCAGCGTGGCCGCCTGCGGGATGACATCAAGGAGTACAAATTCCGGGAAGCTCGTCTGCTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 72 bp GCATCGTTGTTGGGCTCGGCAGCATCGTCACTGAACTaGAGGCCATCCAGCGAGACATGCAGGTGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: ASLLGSAASSLN*RPSSETCRWLV
Trigger: CACCAGCCACCTGCATGTCTCGCTGGATGGCCTCAAGTTCAGTGACGATGCTGCCGAGCCCAACAACGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 72 bp CCGTGCTCAAAGCCATTGACCAGGGCCTCGGCATCGTaGTTGGGCTCGGCAGCATCGTCACTGAACTTGAGG +
Preference number: 6 (lower is better)
Translates to: PCSKPLTRASAS*LGSAASSLNLR
Trigger: CCTCAAGTTCAGTGACGATGCTGCCGAGCCCAACAACGATGCCGAGGCCCTGGTCAATGGCTTTGAGCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 90 bp TGGATCAGGCTCTCCTCCCGGCTCTCTCCGTCAGCAGCCACCTTCTaGTGGTTTGTGTGTGCTTGTCCAAAGGCCTCCTTGAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: WIRLSSRLSPSAATF*WFVCACPKASLSCS
Trigger: GGAGCAGCTCAAGGAGGCCTTTGGACAAGCACACACAAACCACAAGAAGGTGGCTGCTGACGGAGAGAGCCGGGAGGAGAGCCTGATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS GCA 72 bp TTCTCCGACTGCGTGTTGGTGAGGACATTGCGCAACTaGTTCAGCTCCGTCTGCAGCTCTAGCACCTTCCGC +
Preference number: 6 (lower is better)
Translates to: FSDCVLVRTLRN*FSSVCSSSTFR
Trigger: GCGGAAGGTGCTAGAGCTGCAGACGGAGCTGAAGCAGTTGCGCAATGTCCTCACCAACACGCAGTCGGAGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 72 bp TCCTCCCGGCTCTCTCCGTCAGCAGCCACCTTCTTGTaGTTTGTGTGTGCTTGTCCAAAGGCCTCCTTGAGC +
Preference number: 6 (lower is better)
Translates to: SSRLSPSAATFL*FVCACPKASLS
Trigger: GCTCAAGGAGGCCTTTGGACAAGCACACACAAACCACAAGAAGGTGGCTGCTGACGGAGAGAGCCGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 72 bp CTCTCCTCCCGGCTCTCTCCGTCAGCAGCCACCTTCTaGTGGTTTGTGTGTGCTTGTCCAAAGGCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: LSSRLSPSAATF*WFVCACPKASL
Trigger: CAAGGAGGCCTTTGGACAAGCACACACAAACCACAAGAAGGTGGCTGCTGACGGAGAGAGCCGGGAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 72 bp TGCTCAAAGCCATTGACCAGGGCCTCGGCATCGTTGTaGGGCTCGGCAGCATCGTCACTGAACTTGAGGCCA +
Preference number: 6 (lower is better)
Translates to: CSKPLTRASASL*GSAASSLNLRP
Trigger: TGGCCTCAAGTTCAGTGACGATGCTGCCGAGCCCAACAACGATGCCGAGGCCCTGGTCAATGGCTTTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 90 bp TCCTCCAGCTGGCTGTTGAGGTACTCGGTCTCCTCCTCCAGACGCTaGATCTCATGCTTGAGGCCCTCAAACTCCACCTGGTTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: SSSWLLRYSVSSSRR*ISCLRPSNSTWFCL
Trigger: CAGACAGAACCAGGTGGAGTTTGAGGGCCTCAAGCATGAGATCAAGCGTCTGGAGGAGGAGACCGAGTACCTCAACAGCCAGCTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CCA 72 bp CCATGGCCTTCTCATTCTCATACTTGCTCTTCAGGTTaGCAAGGGCCACCTCGGCCGTCTGCTTGTTGGCCT +
Preference number: 6 (lower is better)
Translates to: PWPSHSHTCSSG*QGPPRPSACWP
Trigger: AGGCCAACAAGCAGACGGCCGAGGTGGCCCTTGCCAACCTGAAGAGCAAGTATGAGAATGAGAAGGCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 72 bp TGGCTGTTGAGGTACTCGGTCTCCTCCTCCAGACGCTaGATCTCATGCTTGAGGCCCTCAAACTCCACCTGG +
Preference number: 6 (lower is better)
Translates to: WLLRYSVSSSRR*ISCLRPSNSTW
Trigger: CCAGGTGGAGTTTGAGGGCCTCAAGCATGAGATCAAGCGTCTGGAGGAGGAGACCGAGTACCTCAACAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS GCA 72 bp AGGTACTCGGTCTCCTCCTCCAGACGCTTGATCTCATaGTTGAGGCCCTCAAACTCCACCTGGTTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: RYSVSSSRRLIS*LRPSNSTWFCL
Trigger: CAGACAGAACCAGGTGGAGTTTGAGGGCCTCAAGCATGAGATCAAGCGTCTGGAGGAGGAGACCGAGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS GCA 72 bp GGGTTAGTTGAGGTGAAGCAGATGTTAGCTGCAGCGTaGGGCGCCCCACAGCCCCTAATCACAGTAAATGCT +
Preference number: 6 (lower is better)
Translates to: GLVEVKQMLAAA*GAPQPLITVNA
Trigger: AGCATTTACTGTGATTAGGGGCTGTGGGGCGCCGCACGCTGCAGCTAACATCTGCTTCACCTCAACTAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356884.11
CDS CCA 72 bp TTGTACTCCTTGATGTCATCCCGCAGGCGGCCACGCTaGATCTCCACATTCTGGTTGATCTCCTTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LYSLMSSRRRPR*ISTFWLISFSS
Trigger: GGAGCTGAAGGAGATCAACCAGAATGTGGAGATCCAGCGTGGCCGCCTGCGGGATGACATCAAGGAGTACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS CAA 72 bp TACTCGGTCTCCTCCTCCAGACGCTTGATCTCATGCTaGAGGCCCTCAAACTCCACCTGGTTCTGTCTGAGC +
Preference number: 6 (lower is better)
Translates to: YSVSSSRRLISC*RPSNSTWFCLS
Trigger: GCTCAGACAGAACCAGGTGGAGTTTGAGGGCCTCAAGCATGAGATCAAGCGTCTGGAGGAGGAGACCGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3
CDS TCA 72 bp GCTGGTGTAGAAGGAGTCATTGATGCTCATGTAGTGTaGCAGCTCCTTGCGCAGGCTGTTCTTCTGTTCGCG +
Preference number: 6 (lower is better)
Translates to: AGVEGVIDAHVV*QLLAQAVLLFA
Trigger: CGCGAACAGAAGAACAGCCTGCGCAAGGAGCTGTCACACTACATGAGCATCAATGACTCCTTCTACACCAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356884.11
ENST00000375512.3