RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BICC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000122870

Ensembl transcript IDs: ENST00000263103.1, ENST00000373886.8, ENST00000476684.1

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTaGTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGAGATGGCAT +
Preference number: 1 (lower is better)
Translates to: KARTKWSERKENQVA*FTGRNKEASQRRWH
Trigger: ATGCCATCTCCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
3UTR CCA 90 bp TTGCCCTTTGGTATGGCAAGTGCTAGAGTGAAAGCACGCACAAAATaGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGA +
Preference number: 1 (lower is better)
Translates to: LPFGMASARVKARTK*SERKENQVACFTGR
Trigger: TCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACTTGCCATACCAAAGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
3UTR GCA 90 bp ATTAAAATCATTTTAGCATTACAGGCAGCAGCTAAGTATGACGACTaGAAAGGGTTAATACTGCAAAGTCCATTTGGTCTTTCTTTGCAC +
Preference number: 1 (lower is better)
Translates to: IKIILALQAAAKYDD*KGLILQSPFGLSLH
Trigger: GTGCAAAGAAAGACCAAATGGACTTTGCAGTATTAACCCTTTGCAGTCGTCATACTTAGCTGCTGCCTGTAATGCTAAAATGATTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
3UTR-3UTR TCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGAAAATGCTTTGGTCCTaGTACCAGACACCCAGAGTG +
Preference number: 2 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRKMLWS*YQTPRV
Trigger: CACTCTGGGTGTCTGGTATCAGGACCAAAGCATTTT...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
3UTR-3UTR TCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGAAGGATGGTGTGCTGTaGAGGCTGTTCATACATCTC +
Preference number: 2 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLKDGVL*RLFIHL
Trigger: GAGATGTATGAACAGCCTTCACAGCACACCATCCTT...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
3UTR-3UTR TCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTTGCACCTATTACTGTaGACTAGGTCCATTGCTAGG +
Preference number: 2 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRLHLLL*TRSIAR
Trigger: CCTAGCAATGGACCTAGTTCACAGTAATAGGTGCAA...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
3UTR-3UTR GCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGGCTAAGTATGACGACTaGAAAGGGTTAATACTGCAA +
Preference number: 2 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRAKYDD*KGLILQ
Trigger: TTGCAGTATTAACCCTTTGCAGTCGTCATACTTAGC...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
3UTR CAA 90 bp GTCCATTTGGTCTTTCTTTGCACCTATTACTGTGAACTAGGTCCATaGCTAGGTGTTTCTAGGATGCTAACATACATGAAACAGAATTGG +
Preference number: 2 (lower is better)
Translates to: VHLVFLCTYYCELGP*LGVSRMLTYMKQNW
Trigger: CCAATTCTGTTTCATGTATGTTAGCATCCTAGAAACACCTAGCAATGGACCTAGTTCACAGTAATAGGTGCAAAGAAAGACCAAATGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
3UTR-3UTR GCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCCAGGTGCGAATAAAATaGTTTGGTCCTGATACCAGA +
Preference number: 2 (lower is better)
Translates to: IGPEASGLTYISQNHRIFQVRIK*FGPDTR
Trigger: TCTGGTATCAGGACCAAAGCATTTTATTCGCACCTG...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
3UTR-3UTR GCA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCACATTTGGTCTTTCTTTaGACCTATTACTGTGAACTA +
Preference number: 2 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKAHLVFL*TYYCEL
Trigger: TAGTTCACAGTAATAGGTGCAAAGAAAGACCAAATG...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
3UTR CCA 72 bp CACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTaGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCAC +
Preference number: 3 (lower is better)
Translates to: HAQNGVRGKRTR*PASLGETRRLH
Trigger: GTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
3UTR GCA 72 bp ACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTaGTTCACTGGGAGAAACAAGGAGGCTTCACAGAGG +
Preference number: 3 (lower is better)
Translates to: TKWSERKENQVA*FTGRNKEASQR
Trigger: CCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
3UTR TCA 72 bp ATACCAGACACCCAGAGTGCTAAGGATGGTGTGCTGTaGAGGCTGTTCATACATCTCCTGTGTCCACTTTAC +
Preference number: 3 (lower is better)
Translates to: IPDTQSAKDGVL*RLFIHLLCPLY
Trigger: GTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCACACCATCCTTAGCACTCTGGGTGTCTGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
3UTR-3UTR CAA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCACTCGGGCTCCAGTTATaGAATGTCGTCCATTCTCTA +
Preference number: 3 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKALGLQL*NVVHSL
Trigger: TAGAGAATGGACGACATTCAATAACTGGAGCCCGAG...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
3UTR TCA 72 bp ATAAATAATTGCCCTTTGGTATGGCAAGTGCTAGAGTaGAAGCACGCACAAAATGGAGTGAGAGGAAAGAGA +
Preference number: 3 (lower is better)
Translates to: INNCPLVWQVLE*KHAQNGVRGKR
Trigger: TCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACTTGCCATACCAAAGGGCAATTATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
3UTR GCA 72 bp ATTTTAGCATTACAGGCAGCAGCTAAGTATGACGACTaGAAAGGGTTAATACTGCAAAGTCCATTTGGTCTT +
Preference number: 3 (lower is better)
Translates to: ILALQAAAKYDD*KGLILQSPFGL
Trigger: AAGACCAAATGGACTTTGCAGTATTAACCCTTTGCAGTCGTCATACTTAGCTGCTGCCTGTAATGCTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp AAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGAAGCTGCTGCCCTCTCTaGAGCGCGCTCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: KRTRWPASLGETRRLHRGSCCPL*SALTPW
Trigger: CCAGGGAGTGAGCGCGCTGCAGAGAGGGCAGCAGCT...TCCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp GAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCAGTTTTGCTGGGCAGCTaGTGCCCTCTCTGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: ERKENQVACFTGRNKEASVLLGS*CPLCSA
Trigger: CGCGCTGCAGAGAGGGCAGCAGCTGCCCAGCAAAAC...TGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGAGCTGCTGCCCTCTCTaGAGCGCGCTCACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRSCCPL*SALTPW
Trigger: CCAGGGAGTGAGCGCGCTGCAGAGAGGGCAGCAGCT...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp GCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCGCCCTTTCGGAGTTTTaGTGGGCAGCTGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: ARVKARTKWSERKENQVAALSEF*WAAAAL
Trigger: GAGGGCAGCAGCTGCCCAGCAAAACTCCGAAAGGGC...GGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp CACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGGGGTGCCCATAATGTaGGGCTGGGTGTACCAGAAC +
Preference number: 4 (lower is better)
Translates to: HAQNGVRGKRTRWPASLGGVPIM*GWVYQN
Trigger: GTTCTGGTACACCCAGCCCCACATTATGGGCACCCC...TCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCGCCAGGAGGGGGAGATaGAGCTGTGTGCCCATAGGT +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACARRGR*SCVPIG
Trigger: ACCTATGGGCACACAGCTCCATCTCCCCCTCCTGGC...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp ATGGCAAGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACGCCGGCAGGGCAGGATaGTGGGGATGGACTGGTTGC +
Preference number: 4 (lower is better)
Translates to: MASARVKARTKWSERKENAGRAG*WGWTGC
Trigger: GCAACCAGTCCATCCCCAGCATCCTGCCCTGCCGGC...GTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACTTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGCTGGGGAGTCGGTGCTaGGCTCGCTGTTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRLGSRC*ARCWSR
Trigger: CCGGCTCCAACAGCGAGCGCAGCACCGACTCCCCAG...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCGGCAGGGCAGGATGCTaGGGATGGACTGGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACGRAGC*GWTGCY
Trigger: ATAGCAACCAGTCCATCCCCAGCATCCTGCCCTGCC...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp GCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAACTAAGATATCCAGGCTaGGACATGCCAGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: AQNGVRGKRTRWPASLGELRYPG*DMPGRQ
Trigger: CTGCCGGCCTGGCATGTCCCAGCCTGGATATCTTAG...TTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp GCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCAGCGCGCTCACTCCCTaGAGCCTTCTTGTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: ARVKARTKWSERKENQVASALTP*SLLVSQ
Trigger: TTGGCTGACAAGAAGGCTCCAGGGAGTGAGCGCGCT...GGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp GCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAGACCGTGGAGCAAGGTaGGCCCTTTCGGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: AQNGVRGKRTRWPASLGEDRGAR*ALSEFC
Trigger: GCAAAACTCCGAAAGGGCCCACCTTGCTCCACGGTC...TTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp AAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGAGGTGGCCTGCTTCACTaGGAGAAACAAGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KRTRWPASLGETRRLHRGGGLLH*EKQGGF
Trigger: GAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACC...TCCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR TCA 90 bp AAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGATATTTGTGGGCGTTCTaGCCTCCGTCACCACTGGTT +
Preference number: 4 (lower is better)
Translates to: KRTRWPASLGETRRLHRGYLWAF*PPSPLV
Trigger: AACCAGTGGTGACGGAGGTCAGAACGCCCACAAATA...TCCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp AAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGTGGGGATGGACTGGTTaGTATGGTAACCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: KENQVACFTGRNKEASQRWGWTG*YGNPTA
Trigger: AGCAGTGGGGTTACCATAGCAACCAGTCCATCCCCA...CCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGGCACTGGGGAGTCGGTaGTGCGCTCGCTGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRALGSR*CARCWS
Trigger: GCTCCAACAGCGAGCGCAGCACCGACTCCCCAGTGC...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCCTCCACTCCGGGCTGTaGAGGGTCGCCCCGGCGACC +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFLHSGL*RVAPAT
Trigger: GGTCGCCGGGGCGACCCTGCACAGCCCGGAGTGGAG...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp AAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGCCCATAATGTGGGGCTaGGTGTACCAGAACTTGGAC +
Preference number: 4 (lower is better)
Translates to: KENQVACFTGRNKEASQRPIMWG*VYQNLD
Trigger: GTCCAAGTTCTGGTACACCCAGCCCCACATTATGGG...CCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp GAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCAAGTGCTCACGACTGTTaGACCGTGAAAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: ERKENQVACFTGRNKEASSAHDC*TVKGTW
Trigger: CCATGTCCCTTTCACGGTCCAACAGTCGTGAGCACT...TGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR TCA 90 bp GAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCAATGGACGGATCCCCGTaGTTTGCACTCAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: ERKENQVACFTGRNKEASMDGSP*FALSTF
Trigger: AAAAGTGCTGAGTGCAAATCACGGGGATCCGTCCAT...TGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR TCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCACTCAGTTCAGGGTCTaGGAGCAACCTGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACTQFRV*EQPVSA
Trigger: AGCACTGACAGGTTGCTCTCAGACCCTGAACTGAGT...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp GCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAGAGAACCAGGTGGCCTaGTTCACTGGGAGAAACAAG +
Preference number: 4 (lower is better)
Translates to: AQNGVRGKRTRWPASLGEENQVA*FTGRNK
Trigger: CTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTC...TTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp GCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCGCAGGATGCTGGGGATaGACTGGTTGCTATGGTAAC +
Preference number: 4 (lower is better)
Translates to: ARVKARTKWSERKENQVAAGCWG*TGCYGN
Trigger: GTTACCATAGCAACCAGTCCATCCCCAGCATCCTGC...GGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp GCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACCCACTTGTCTGGATaGACGGATCCCCGTGATTTG +
Preference number: 4 (lower is better)
Translates to: AQNGVRGKRTRWPASLGETHLSG*TDPRDL
Trigger: CAAATCACGGGGATCCGTCCATCCAGACAAGTGGGT...TTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCCCACTGTCTGCCTTTTaGCACAGGAAACCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACPLSAF*HRKPWR
Trigger: CCTCCAAGGTTTCCTGTGCCAAAAGGCAGACAGTGG...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCCTCGGAGCCGGGCACTaGGGAGTCGGTGCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFLGAGH*GVGAAL
Trigger: GAGCGCAGCACCGACTCCCCAGTGCCCGGCTCCGAG...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp CACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGACGGTCTGCATACTGTTaGTATGGACATCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: HAQNGVRGKRTRWPASLGRSAYC*YGHQQE
Trigger: CTCCTGTTGATGTCCATATCAACAGTATGCAGACCG...TCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR TCA 90 bp AAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGAATTACACCAAGCACTTaGAGTCAGAGAGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: KRTRWPASLGETRRLHRGITPST*SQRGHS
Trigger: ACTGTGGCCTCTCTGACTTCAAGTGCTTGGTGTAAT...TCCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp GCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAACGGATCCCCGTGATTTaGACTCAGCACTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AQNGVRGKRTRWPASLGERIPVI*TQHFFS
Trigger: GGAGAAAAAGTGCTGAGTGCAAATCACGGGGATCCG...TTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp GCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAGATTTGGGAGATGTCTaGTCAGACCCACTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AQNGVRGKRTRWPASLGEDLGDV*SDPLVW
Trigger: CCAGACAAGTGGGTCTGAGCAGACATCTCCCAAATC...TTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATGCTAGCTCGTCCCCCTaGAGCCGCCGACGCCACCGC +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNASSSP*SRRRHR
Trigger: GCGGTGGCGTCGGCGGCTGCAGGGGGACGAGCTAGC...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp GAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCATCAGAGATAAGGTGGTaGGTCCCAAAAGACCTAGTC +
Preference number: 4 (lower is better)
Translates to: ERKENQVACFTGRNKEASSEIRW*VPKDLV
Trigger: GACTAGGTCTTTTGGGACCCACCACCTTATCTCTGA...TGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp GCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCACCGTGAAAGGGACATaGATGAGCCCTCATAAGTGG +
Preference number: 4 (lower is better)
Translates to: ARVKARTKWSERKENQVATVKGT*MSPHKW
Trigger: CCACTTATGAGGGCTCATCCATGTCCCTTTCACGGT...GGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCATGCTGCGCTCGCTGTTaGAGCCGGGGTCCGACTGCG +
Preference number: 4 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKACCARC*SRGPTA
Trigger: CGCAGTCGGACCCCGGCTCCAACAGCGAGCGCAGCA...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp AGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGAAAGACCTAGTCCAGTaGGTCCAAGGCCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SARVKARTKWSERKENQVKDLVQ*VQGLLK
Trigger: CTTCAGCAGGCCTTGGACTCACTGGACTAGGTCTTT...CACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR TCA 90 bp GCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCAAAACCTGTGGCACTTaGAGTATTAGCAAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ARVKARTKWSERKENQVAKTCGT*SISKWG
Trigger: CCCCCACTTGCTAATACTTCAAGTGCCACAGGTTTT...GGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR TCA 90 bp GCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCCAAATGCCTGCATGTTaGCATATGATGACCGTGGAG +
Preference number: 4 (lower is better)
Translates to: ARVKARTKWSERKENQVAQMPAC*HMMTVE
Trigger: CTCCACGGTCATCATATGTCAACATGCAGGCATTTG...GGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCGCCGGCAGGGCAGGATaGTGGGGATGGACTGGTTGC +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFAGRAG*WGWTGC
Trigger: GCAACCAGTCCATCCCCAGCATCCTGCCCTGCCGGC...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp ATGGCAAGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCTTCCACCTCCCAAGTaGTCACGACTGTTGGACCGT +
Preference number: 4 (lower is better)
Translates to: MASARVKARTKWSERKENLPPPK*SRLLDR
Trigger: ACGGTCCAACAGTCGTGAGCACTTGGGAGGTGGAAG...GTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACTTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGAGTCTTCCCCACTTCTaGCTTTCCCTTCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRSLPHF*LSLQQQ
Trigger: CTGCTGCTGAAGGGAAAGGCAGAAGTGGGGAAGACT...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp GAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCATGTTCAGAGATAAGGTaGTGGGTCCCAAAAGACCTA +
Preference number: 4 (lower is better)
Translates to: ERKENQVACFTGRNKEASCSEIR*WVPKDL
Trigger: TAGGTCTTTTGGGACCCACCACCTTATCTCTGAACA...TGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp GCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCGGGTGTACCAGAACTTaGACTTTGCAAAGGACTGAC +
Preference number: 4 (lower is better)
Translates to: ARVKARTKWSERKENQVAGCTRT*TLQRTD
Trigger: GTCAGTCCTTTGCAAAGTCCAAGTTCTGGTACACCC...GGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp GAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCAGGCTTGGGCAGTAGATaGAATCATAAGGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: ERKENQVACFTGRNKEASGLGSR*NHKVWY
Trigger: ATACCACACCTTATGATTCCATCTACTGCCCAAGCC...TGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp AGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGCAGTGGGGCTTGATTTaGGAGATGTCTGCTCAGACC +
Preference number: 4 (lower is better)
Translates to: SARVKARTKWSERKENQVQWGLI*EMSAQT
Trigger: GGTCTGAGCAGACATCTCCCAAATCAAGCCCCACTG...CACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp AGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGCCAGCATTCCCAGAATaGGAAGGACTTCGAGGCATG +
Preference number: 4 (lower is better)
Translates to: SARVKARTKWSERKENQVPAFPE*EGLRGM
Trigger: CATGCCTCGAAGTCCTTCCCATTCTGGGAATGCTGG...CACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR TCA 90 bp GCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAAGAGGCCACAGTCAGTaGTACTCCAACCCAAATAAA +
Preference number: 4 (lower is better)
Translates to: AQNGVRGKRTRWPASLGERGHSQ*YSNPNK
Trigger: TTTATTTGGGTTGGAGTATCACTGACTGTGGCCTCT...TTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCCCAGAACTTGGACTTTaGAAAGGACTGACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACPELGL*KGLTEL
Trigger: TAGCTCAGTCAGTCCTTTGCAAAGTCCAAGTTCTGG...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp CACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAAGTGTGAGTTTTTCGTaGCTTGCAATAGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: HAQNGVRGKRTRWPASLGSVSFS*LAIVPL
Trigger: CAGTGGAACTATTGCAAGGCACGAAAAACTCACACT...TCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCAGTTTTGCTGGGCAGCTaGTGCCCTCTCTGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKAVLLGS*CPLCSA
Trigger: CGCGCTGCAGAGAGGGCAGCAGCTGCCCAGCAAAAC...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp GAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCAGCTGCCAATAGAAGCTaGAAATTCACTATGACTTCC +
Preference number: 4 (lower is better)
Translates to: ERKENQVACFTGRNKEASAANRS*KFTMTS
Trigger: GGAAGTCATAGTGAATTTGCAGCTTCTATTGGCAGC...TGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCCATTACAACCTTCAGTaGGGCTTGATTTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACHYNLQ*GLIWEM
Trigger: CATCTCCCAAATCAAGCCCCACTGAAGGTTGTAATG...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGACCGTGGAGCAAGGTaGGCCCTTTCGGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLDRGAR*ALSEFC
Trigger: GCAAAACTCCGAAAGGGCCCACCTTGCTCCACGGTC...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCGCTTCACAGAGGAGATaGCATGTGAATTACACCAAG +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACASQRR*HVNYTK
Trigger: CTTGGTGTAATTCACATGCCATCTCCTCTGTGAAGC...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR TCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGAAAGACCTAGTCCAGTaGGTCCAAGGCCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRKDLVQ*VQGLLK
Trigger: CTTCAGCAGGCCTTGGACTCACTGGACTAGGTCTTT...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp AGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGTTGCAAAGGACTGACTaGGCTATTAAGAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: RKENQVACFTGRNKEASQLQRTD*AIKSIQ
Trigger: TTGAATGCTCTTAATAGCTCAGTCAGTCCTTTGCAA...CTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR TCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTATTTGTGGGCGTTCTaGCCTCCGTCACCACTGGTT +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRYLWAF*PPSPLV
Trigger: AACCAGTGGTGACGGAGGTCAGAACGCCCACAAATA...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGAGCTCCTTCAGATCCTaGTCTGTGAGAGTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRSSFRS*SVRVRN
Trigger: ATTCCTCACTCTCACAGATCAGGATCTGAAGGAGCT...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGAAAATGCTTTGGTCCTaGTACCAGACACCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRKMLWS*YQTPRV
Trigger: CACTCTGGGTGTCTGGTATCAGGACCAAAGCATTTT...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTGGGGATGGACTGGTTaGTATGGTAACCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRWGWTG*YGNPTA
Trigger: AGCAGTGGGGTTACCATAGCAACCAGTCCATCCCCA...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCAAGGACTTCGAGGCATaGCTACTTCAACAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACKDFEA*LLQQKH
Trigger: ATGCTTTTGTTGAAGTAGGCATGCCTCGAAGTCCTT...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCAGAGCAACCTGTCAGTaGTGTGTAAGTGTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACRATCQ*CVSVSF
Trigger: AAAACTCACACTTACACAGCACTGACAGGTTGCTCT...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGCTTCCACCTCCCAAGTaGTCACGACTGTTGGACCGT +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLLPPPK*SRLLDR
Trigger: ACGGTCCAACAGTCGTGAGCACTTGGGAGGTGGAAG...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCGTGCCAAGAGGGTGCTaGTACCAGCGGCCACTGACA +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFVPRGC*YQRPLT
Trigger: TGTCAGTGGCCGCTGGTAGCAGCACCCTCTTGGCAC...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp AAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGTGGCTGTTTGGGCTTTaGTTTAATACTGATGAAGAC +
Preference number: 4 (lower is better)
Translates to: KENQVACFTGRNKEASQRWLFGL*FNTDED
Trigger: GTCTTCATCAGTATTAAACCAAAGCCCAAACAGCCA...CCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp GAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCATGCATACTGTTGATATaGACATCAACAGGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: ERKENQVACFTGRNKEASCILLI*TSTGVK
Trigger: CTTGACTCCTGTTGATGTCCATATCAACAGTATGCA...TGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGACCCACTTGTCTGGATaGACGGATCCCCGTGATTTG +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRTHLSG*TDPRDL
Trigger: CAAATCACGGGGATCCGTCCATCCAGACAAGTGGGT...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp AGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGTGGCACAGGAAACCTTaGAGGGACACATCATCTGTT +
Preference number: 4 (lower is better)
Translates to: SARVKARTKWSERKENQVWHRKP*RDTSSV
Trigger: AACAGATGATGTGTCCCTCCAAGGTTTCCTGTGCCA...CACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp CACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAAAGTGGTTGTCATTGTaGGCTTATAGGACACATGAT +
Preference number: 4 (lower is better)
Translates to: HAQNGVRGKRTRWPASLGKWLSL*AYRTHD
Trigger: ATCATGTGTCCTATAAGCCCACAATGACAACCACTT...TCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCATGAGCCCTCATAAGTaGTTGTCATTGTGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACMSPHK*LSLWAY
Trigger: ATAAGCCCACAATGACAACCACTTATGAGGGCTCAT...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGAGTGCTCACGACTGTTaGACCGTGAAAGGGACATGG +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRSAHDC*TVKGTW
Trigger: CCATGTCCCTTTCACGGTCCAACAGTCGTGAGCACT...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp CACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAAACACAACGCTCACTTaGTTTGTTTTGTTTACGCTT +
Preference number: 4 (lower is better)
Translates to: HAQNGVRGKRTRWPASLGNTTLT*FVLFTL
Trigger: AAGCGTAAACAAAACAAATCAAGTGAGCGTTGTGTT...TCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR TCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGAGAGTGAGGAATGTCTaGAGATCGATCTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRRVRNV*RSISCC
Trigger: GCAACAAGAGATCGATCTTCAGACATTCCTCACTCT...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTTTTGCCTTCGGTCTaGATACTGTTGATATGGACA +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACFLPSV*ILLIWT
Trigger: TGTCCATATCAACAGTATGCAGACCGAAGGCAAAAA...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCGGATACCTAAAAGTGTaGATAAAACACAACGCTCAC +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACGYLKV*IKHNAH
Trigger: GTGAGCGTTGTGTTTTATGCACACTTTTAGGTATCC...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCGGCAGGGCAGGATGCTaGGGATGGACTGGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFGRAGC*GWTGCY
Trigger: ATAGCAACCAGTCCATCCCCAGCATCCTGCCCTGCC...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCGGGGTGCCCATAATGTaGGGCTGGGTGTACCAGAAC +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFGVPIM*GWVYQN
Trigger: GTTCTGGTACACCCAGCCCCACATTATGGGCACCCC...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp CACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAAAACACATTCTAATCTaGGGATACCTAAAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: HAQNGVRGKRTRWPASLGKHILI*GYLKVC
Trigger: GCACACTTTTAGGTATCCCCAGATTAGAATGTGTTT...TCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR TCA 90 bp ATGGCAAGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACGCTGCAAATTCACTATaGCTTCCAGGTCCAATTCCA +
Preference number: 4 (lower is better)
Translates to: MASARVKARTKWSERKENAANSL*LPGPIP
Trigger: TGGAATTGGACCTGGAAGTCATAGTGAATTTGCAGC...GTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACTTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR TCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGCCATCAACTGCGCAATaGATTGTGGATCTACTTCAA +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRPSTAQ*IVDLLQ
Trigger: TTGAAGTAGATCCACAATTCATTGCGCAGTTGATGG...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGAAGGATGGTGTGCTGTaGAGGCTGTTCATACATCTC +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRKDGVL*RLFIHL
Trigger: GAGATGTATGAACAGCCTTCACAGCACACCATCCTT...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp ATGGCAAGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACAATAGTTCCACTGTCTaGCTTTTGGCACAGGAAACC +
Preference number: 4 (lower is better)
Translates to: MASARVKARTKWSERKENNSSTV*LLAQET
Trigger: GGTTTCCTGTGCCAAAAGGCAGACAGTGGAACTATT...GTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACTTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp ATGGCAAGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACGAGTTTTTCGTGCCTTaGAATAGTTCCACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: MASARVKARTKWSERKENEFFVP*NSSTVC
Trigger: GCAGACAGTGGAACTATTGCAAGGCACGAAAAACTC...GTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACTTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR GCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGAGTGTGAGTTTTTCGTaGCTTGCAATAGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRSVSFS*LAIVPL
Trigger: CAGTGGAACTATTGCAAGGCACGAAAAACTCACACT...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTGCCCTTTCGGAGTTTTaGTGGGCAGCTGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIALSEF*WAAAAL
Trigger: GAGGGCAGCAGCTGCCCAGCAAAACTCCGAAAGGGC...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGAGCTGTTCCATCAACTaGGCAATGAATTGTGGATCT +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRSCSIN*AMNCGS
Trigger: AGATCCACAATTCATTGCGCAGTTGATGGAACAGCT...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGCAGGTGCGAATAAAATaGTTTGGTCCTGATACCAGA +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRQVRIK*FGPDTR
Trigger: TCTGGTATCAGGACCAAAGCATTTTATTCGCACCTG...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp GCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGGAATCATAAGGTGTaGTATAGCAGAAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: ARVKARTKWSERKENQVAWNHKV*YSRKTC
Trigger: ACAGGTTTTTCTGCTATACCACACCTTATGATTCCA...GGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp GCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTTAGTTAATGTGGCTTaGGCAGTAGATGGAATCATA +
Preference number: 4 (lower is better)
Translates to: ARVKARTKWSERKENQVALVNVA*AVDGII
Trigger: TATGATTCCATCTACTGCCCAAGCCACATTAACTAA...GGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTGCCAGGAGGGGGAGATaGAGCTGTGTGCCCATAGGT +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIARRGR*SCVPIG
Trigger: ACCTATGGGCACACAGCTCCATCTCCCCCTCCTGGC...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp AAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGAACCATATTTTATATCTaGAGACTGTGCATGTCCATT +
Preference number: 4 (lower is better)
Translates to: KRTRWPASLGETRRLHRGTIFYI*RLCMSI
Trigger: AATGGACATGCACAGTCTCCAGATATAAAATATGGT...TCCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCCTTGATAGTTTCAGCTaGCATGGATTTAGAAAAACC +
Preference number: 4 (lower is better)
Translates to: RVKARTKWSERKENQVACLDSFS*HGFRKT
Trigger: GGTTTTTCTAAATCCATGCCAGCTGAAACTATCAAG...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGTTGGAATCTGGAAAGTaGATATGGCATCCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRLESGK*IWHPVS
Trigger: AGAAACCGGATGCCATATCCACTTTCCAGATTCCAA...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGTCCGATCTTCAGTTTTaGTGGCCAAGCAATCTGCGT +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLSDLQF*WPSNLR
Trigger: ACGCAGATTGCTTGGCCATCAAAACTGAAGATCGGA...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGTGTAATTGCTACTGCTaGGATAGTGTTCCGTTGATT +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRCNCYC*DSVPLI
Trigger: AATCAACGGAACACTATCTCAGCAGTAGCAATTACA...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGGGAGGTCAGAACCTTTaGAAGAGCTATTTAAGTTAC +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRGGQNL*KSYLSY
Trigger: GTAACTTAAATAGCTCTTTCAAAGGTTCTGACCTCC...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGCACATATGCACAGGATaGGTAAAGGGAGTGATTCAG +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRHICTG*VKGVIQ
Trigger: CTGAATCACTCCCTTTACTCATCCTGTGCATATGTG...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGTTTTTGCCTTCGGTCTaGATACTGTTGATATGGACA +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRFLPSV*ILLIWT
Trigger: TGTCCATATCAACAGTATGCAGACCGAAGGCAAAAA...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGCTGTCAGCGAGGAAATaGAGTCCATGTAATTGCTAC +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRLSARK*SPCNCY
Trigger: GTAGCAATTACATGGACTGCATTTCCTCGCTGACAG...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGTGCTAAGGATGGTGTaGTGTGAAGGCTGTTCATAC +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLVLRMV*CEGCSY
Trigger: GTATGAACAGCCTTCACAGCACACCATCCTTAGCAC...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGGCTAAGTATGACGACTaGAAAGGGTTAATACTGCAA +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRAKYDD*KGLILQ
Trigger: TTGCAGTATTAACCCTTTGCAGTCGTCATACTTAGC...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGTCCTCCTGTTGCAAATaGATGGTAGACAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLSSCCK*MVDSWE
Trigger: TTCCCAGCTGTCTACCATGCATTTGCAACAGGAGGA...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGTGGCTGTTTGGGCTTTaGTTTAATACTGATGAAGAC +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRWLFGL*FNTDED
Trigger: GTCTTCATCAGTATTAAACCAAAGCCCAAACAGCCA...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ATGGCAAGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACAATCACAGACTTGCTTaGCTGTTTGGGCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: MASARVKARTKWSERKENNHRLA*LFGLWF
Trigger: AAACCAAAGCCCAAACAGCCAAGCAAGTCTGTGATT...GTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACTTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATCTAAGATATCCAGGCTaGGACATGCCAGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNLRYPG*DMPGRQ
Trigger: CTGCCGGCCTGGCATGTCCCAGCCTGGATATCTTAG...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTGTTCAGAGATAAGGTaGTGGGTCCCAAAAGACCTA +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRCSEIR*WVPKDL
Trigger: TAGGTCTTTTGGGACCCACCACCTTATCTCTGAACA...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATAGCGCGCTCACTCCCTaGAGCCTTCTTGTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNSALTP*SLLVSQ
Trigger: TTGGCTGACAAGAAGGCTCCAGGGAGTGAGCGCGCT...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGGATCTTTCTTGGATTTaGCTCCGATCTTCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRDLSWI*LRSSVL
Trigger: CAAAACTGAAGATCGGAGCCAAATCCAAGAAAGATC...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTGGTCCAGAAGCAAGTaGACTCACTTACATTTCCCA +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRWSRSK*THLHFP
Trigger: TGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCA...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGTACATGAAACAGAATTaGTCCAGAAGCAAGTGGACT +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRYMKQN*SRSKWT
Trigger: AGTCCACTTGCTTCTGGACCAATTCTGTTTCATGTA...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCATCAGGAAAGTGGATCTaGGCACCTGTTCTCTGCATG +
Preference number: 4 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKASGKWI*APVLCM
Trigger: CATGCAGAGAACAGGTGCTCAGATCCACTTTCCTGA...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGATGGCCAAGCAATCTaGGTATTTGTTTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLDGQAI*VFVSSM
Trigger: CATGGAGGAAACAAATACGCAGATTGCTTGGCCATC...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCAGGCAGATTCTACTCCTaGTGGTTGTCCCGCTATAGA +
Preference number: 4 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKAGRFYS*WLSRYR
Trigger: TCTATAGCGGGACAACCAGCAGGAGTAGAATCTGCC...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGCAACCCATGAGATATTaGCTTGCAAGACAGACAGAC +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLQPMRY*LARQTD
Trigger: GTCTGTCTGTCTTGCAAGGCAATATCTCATGGGTTG...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGAATCACAGACTTGCTTaGCTGTTTGGGCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRNHRLA*LFGLWF
Trigger: AAACCAAAGCCCAAACAGCCAAGCAAGTCTGTGATT...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGTTAGTTAATGTGGCTTaGGCAGTAGATGGAATCATA +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRLVNVA*AVDGII
Trigger: TATGATTCCATCTACTGCCCAAGCCACATTAACTAA...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCAACCGTGAAAGGGACATaGATGAGCCCTCATAAGTGG +
Preference number: 4 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKATVKGT*MSPHKW
Trigger: CCACTTATGAGGGCTCATCCATGTCCCTTTCACGGT...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTATGGGGATCTTTCTTaGATTTGGCTCCGATCTTCA +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRYGDLS*IWLRSS
Trigger: TGAAGATCGGAGCCAAATCCAAGAAAGATCCCCATA...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATGACAGACAGACTCAATaGTGCCCTGGAGGTAGACGG +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNDRQTQ*CPGGRR
Trigger: CCGTCTACCTCCAGGGCACCATTGAGTCTGTCTGTC...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGTCGATCTCTTGTTGCTaGAAAACATCTGTGTATTTG +
Preference number: 4 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRSISCC*KTSVYL
Trigger: CAAATACACAGATGTTTTCCAGCAACAAGAGATCGA...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATACTCAGTTCAGGGTCTaGGAGCAACCTGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNTQFRV*EQPVSA
Trigger: AGCACTGACAGGTTGCTCTCAGACCCTGAACTGAGT...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCCAAATGCCTGCATGTTaGCATATGATGACCGTGGAG +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFQMPAC*HMMTVE
Trigger: CTCCACGGTCATCATATGTCAACATGCAGGCATTTG...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTGTCTAAGACAGACATaGTCATTTCCTTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRCLRQT*SFPWLL
Trigger: AAGAAGCCAAGGAAATGATCATGTCTGTCTTAGACA...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGGTTTGTGATATATGCTaGATAGAGGGGGAATTAGGA +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRVCDIC*IEGELG
Trigger: TCCTAATTCCCCCTCTATTCAGCATATATCACAAAC...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCAGAGGAAGACAACCCATaGGATATTGCCTTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKAEEDNP*DIALQD
Trigger: GTCTTGCAAGGCAATATCTCATGGGTTGTCTTCCTC...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGAAGGACTTCGAGGCATaGCTACTTCAACAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLKDFEA*LLQQKH
Trigger: ATGCTTTTGTTGAAGTAGGCATGCCTCGAAGTCCTT...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGAGAGCAACCTGTCAGTaGTGTGTAAGTGTGAGTTTT +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLRATCQ*CVSVSF
Trigger: AAAACTCACACTTACACAGCACTGACAGGTTGCTCT...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGCTGCCAATAGAAGCTaGAAATTCACTATGACTTCC +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLAANRS*KFTMTS
Trigger: GGAAGTCATAGTGAATTTGCAGCTTCTATTGGCAGC...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGTTAAGTTACAGCCATTaGTTCCTGTCAGCGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLLSYSH*FLSARK
Trigger: TTTCCTCGCTGACAGGAAGCAATGGCTGTAACTTAA...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCATCAGAGATAAGGTGGTaGGTCCCAAAAGACCTAGTC +
Preference number: 4 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKASEIRW*VPKDLV
Trigger: GACTAGGTCTTTTGGGACCCACCACCTTATCTCTGA...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATCCCATAATGTGGGGCTaGGTGTACCAGAACTTGGAC +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNPIMWG*VYQNLD
Trigger: GTCCAAGTTCTGGTACACCCAGCCCCACATTATGGG...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATCAGTGGGGCTTGATTTaGGAGATGTCTGCTCAGACC +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNQWGLI*EMSAQT
Trigger: GGTCTGAGCAGACATCTCCCAAATCAAGCCCCACTG...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATCCAGCATTCCCAGAATaGGAAGGACTTCGAGGCATG +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNPAFPE*EGLRGM
Trigger: CATGCCTCGAAGTCCTTCCCATTCTGGGAATGCTGG...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCTGGCACAGGAAACCTTaGAGGGACACATCATCTGTT +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFWHRKP*RDTSSV
Trigger: AACAGATGATGTGTCCCTCCAAGGTTTCCTGTGCCA...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTCCACTGTCTGCCTTTTaGCACAGGAAACCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIPLSAF*HRKPWR
Trigger: CCTCCAAGGTTTCCTGTGCCAAAAGGCAGACAGTGG...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTATGGACGGATCCCCGTaGTTTGCACTCAGCACTTTT +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIMDGSP*FALSTF
Trigger: AAAAGTGCTGAGTGCAAATCACGGGGATCCGTCCAT...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCAGCTGCAAATTCACTATaGCTTCCAGGTCCAATTCCA +
Preference number: 4 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKAAANSL*LPGPIP
Trigger: TGGAATTGGACCTGGAAGTCATAGTGAATTTGCAGC...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCTTGCACCTATTACTGTaGACTAGGTCCATTGCTAGG +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFLHLLL*TRSIAR
Trigger: CCTAGCAATGGACCTAGTTCACAGTAATAGGTGCAA...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATCGGATCCCCGTGATTTaGACTCAGCACTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNRIPVI*TQHFFS
Trigger: GGAGAAAAAGTGCTGAGTGCAAATCACGGGGATCCG...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTGATTTGGGAGATGTCTaGTCAGACCCACTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIDLGDV*SDPLVW
Trigger: CCAGACAAGTGGGTCTGAGCAGACATCTCCCAAATC...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGAGATCGATCTCTTGTTaGTGGAAAACATCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRRSISC*WKTSVY
Trigger: ATACACAGATGTTTTCCAGCAACAAGAGATCGATCT...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ATGGCAAGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCTCCAAGTGATGAAGTaGATATTGCACCATATTTTA +
Preference number: 4 (lower is better)
Translates to: MASARVKARTKWSERKENLQVMK*ILHHIL
Trigger: TAAAATATGGTGCAATATCCACTTCATCACTTGGAG...GTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACTTGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCCATTACAACCTTCAGTaGGGCTTGATTTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFHYNLQ*GLIWEM
Trigger: CATCTCCCAAATCAAGCCCCACTGAAGGTTGTAATG...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCCAGCAGCTTGTAACATaGCCTCAAGTTTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFQQLVT*PQVSSC
Trigger: ACAGGAAGAAACTTGAGGCCATGTTACAAGCTGCTG...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCATCTGGAAAGTGGATATaGCATCCGGTTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKASGKWI*HPVSSI
Trigger: GATGGAAGAAACCGGATGCCATATCCACTTTCCAGA...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCAGATTCTACTCCTGCTaGTTGTCCCGCTATAGATAC +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFRFYSC*LSRYRY
Trigger: GTATCTATAGCGGGACAACCAGCAGGAGTAGAATCT...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCTGCATGGTAGACAGCTaGGAAAAGAGCTCCAAGATT +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFCMVDS*EKSSKI
Trigger: AATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCA...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTCGGTCTGCATACTGTTaGTATGGACATCAACAGGAG +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIRSAYC*YGHQQE
Trigger: CTCCTGTTGATGTCCATATCAACAGTATGCAGACCG...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCACATCCATCTTCAGTGTaGCTCGATTGCTTTTTGTGT +
Preference number: 4 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKAHPSSV*LDCFLC
Trigger: ACACAAAAAGCAATCGAGTCACACTGAAGATGGATG...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTGGATCAGGAACCGGTTaGAGAATTCCAGCAATTGGT +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIGSGTG*RIPAIG
Trigger: ACCAATTGCTGGAATTCTTCAACCGGTTCCTGATCC...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATCTTCCAGGAAAGAGGTaGGTGCATTTGGCGATTCAA +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNLPGKR*VHLAIQ
Trigger: TTGAATCGCCAAATGCACGCACCTCTTTCCTGGAAG...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTGCTGTCTTTATGAACTaGCACCCTGGAGGCTCAAAT +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIAVFMN*HPGGSN
Trigger: ATTTGAGCCTCCAGGGTGGCAGTTCATAAAGACAGC...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGAGAATGTTTCTGTGTaGAAAATGCCTCTTCAATTC +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLENVSV*KMPLQF
Trigger: GAATTGAAGAGGCATTTTGCACACAGAAACATTCTC...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATGGGTGTACCAGAACTTaGACTTTGCAAAGGACTGAC +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNGCTRT*TLQRTD
Trigger: GTCAGTCCTTTGCAAAGTCCAAGTTCTGGTACACCC...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGTGGAATCATAAGGTGTaGTATAGCAGAAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLWNHKV*YSRKTC
Trigger: ACAGGTTTTTCTGCTATACCACACCTTATGATTCCA...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCTTGCAAAGGACTGACTaGGCTATTAAGAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFLQRTD*AIKSIQ
Trigger: TTGAATGCTCTTAATAGCTCAGTCAGTCCTTTGCAA...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTGCACTAGTGTTATTCTaGGACCCTCGTACTATGACA +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIALVLF*DPRTMT
Trigger: TGTCATAGTACGAGGGTCTCAGAATAACACTAGTGC...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR TCA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCAAGAGTACTGAGTTGTTaGACAGGACATAAATCTGGT +
Preference number: 4 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKARVLSC*TGHKSG
Trigger: ACCAGATTTATGTCCTGTTCAACAACTCAGTACTCT...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATAATAGTTCCACTGTCTaGCTTTTGGCACAGGAAACC +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNNSSTV*LLAQET
Trigger: GGTTTCCTGTGCCAAAAGGCAGACAGTGGAACTATT...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATGAGTTTTTCGTGCCTTaGAATAGTTCCACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNEFFVP*NSSTVC
Trigger: GCAGACAGTGGAACTATTGCAAGGCACGAAAAACTC...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATGGCTTGGGCAGTAGATaGAATCATAAGGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNGLGSR*NHKVWY
Trigger: ATACCACACCTTATGATTCCATCTACTGCCCAAGCC...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGACCATATTTTATATCTaGAGACTGTGCATGTCCATT +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLTIFYI*RLCMSI
Trigger: AATGGACATGCACAGTCTCCAGATATAAAATATGGT...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGCTCCAAGTGATGAAGTaGATATTGCACCATATTTTA +
Preference number: 4 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLLQVMK*ILHHIL
Trigger: TAAAATATGGTGCAATATCCACTTCATCACTTGGAG...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCAAGTGGTTGTCATTGTaGGCTTATAGGACACATGAT +
Preference number: 4 (lower is better)
Translates to: IGPEASGLTYISQNHRIFKWLSL*AYRTHD
Trigger: ATCATGTGTCCTATAAGCCCACAATGACAACCACTT...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATGATGTTCTAACAGCATaGCAGTTCCTTCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNDVLTA*QFLPSQ
Trigger: CTGTGAAGGAAGGAACTGCCATGCTGTTAGAACATC...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
3UTR CAA 72 bp GTCTTTCTTTGCACCTATTACTGTGAACTAGGTCCATaGCTAGGTGTTTCTAGGATGCTAACATACATGAAA +
Preference number: 4 (lower is better)
Translates to: VFLCTYYCELGP*LGVSRMLTYMK
Trigger: TTTCATGTATGTTAGCATCCTAGAAACACCTAGCAATGGACCTAGTTCACAGTAATAGGTGCAAAGAAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATATGAGCCCTCATAAGTaGTTGTCATTGTGGGCTTAT +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNMSPHK*LSLWAY
Trigger: ATAAGCCCACAATGACAACCACTTATGAGGGCTCAT...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTATTCCTGTTGGAATCTaGAAAGTGGATATGGCATCC +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIIPVGI*KVDMAS
Trigger: GGATGCCATATCCACTTTCCAGATTCCAACAGGAAT...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTTGCATACTGTTGATATaGACATCAACAGGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFICILLI*TSTGVK
Trigger: CTTGACTCCTGTTGATGTCCATATCAACAGTATGCA...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTTCTTTTGTGGATTACTaGGATCAGGAAAGTGGATCT +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFISFVDY*DQESGS
Trigger: AGATCCACTTTCCTGATCCCAGTAATCCACAAAAGA...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATCTTGATAGTTTCAGCTaGCATGGATTTAGAAAAACC +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNLDSFS*HGFRKT
Trigger: GGTTTTTCTAAATCCATGCCAGCTGAAACTATCAAG...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTCCAGAAACCTTAATATaGGGATCTTTCTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIPETLI*GSFLDL
Trigger: CAAATCCAAGAAAGATCCCCATATTAAGGTTTCTGG...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATCTTGGTTATTCCTGTTaGAATCTGGAAAGTGGATAT +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNLGYSC*NLESGY
Trigger: ATATCCACTTTCCAGATTCCAACAGGAATAACCAAG...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATAATCACAGAATATTCTaGACAGAAACTAAGATCCAG +
Preference number: 4 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNNHRIF*TETKIQ
Trigger: CTGGATCTTAGTTTCTGTGCAGAATATTCTGTGATT...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR GCA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTCATTTGGTCTTTCTTTaGACCTATTACTGTGAACTA +
Preference number: 4 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIHLVFL*TYYCEL
Trigger: TAGTTCACAGTAATAGGTGCAAAGAAAGACCAAATG...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS CCA 90 bp CGTCCTCGGAGCCGGGCACTGGGGAGTCGGTGCTGCGCTCGCTGTTaGAGCCGGGGTCCGACTGCGCCGCCAGGTAGCCGGGCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: RPRSRALGSRCCARC*SRGPTAPPGSRALP
Trigger: AGGGAGAGCCCGGCTACCTGGCGGCGCAGTCGGACCCCGGCTCCAACAGCGAGCGCAGCACCGACTCCCCAGTGCCCGGCTCCGAGGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS GCA 90 bp CGGCGACCAAGTCGTCCTCGGAGCCGGGCACTGGGGAGTCGGTGCTaGGCTCGCTGTTGGAGCCGGGGTCCGACTGCGCCGCCAGGTAGC +
Preference number: 5 (lower is better)
Translates to: RRPSRPRSRALGSRC*ARCWSRGPTAPPGS
Trigger: GCTACCTGGCGGCGCAGTCGGACCCCGGCTCCAACAGCGAGCGCAGCACCGACTCCCCAGTGCCCGGCTCCGAGGACGACTTGGTCGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS CCA 90 bp GTGCAGGGTCGCCCCGGCGACCAAGTCGTCCTCGGAGCCGGGCACTaGGGAGTCGGTGCTGCGCTCGCTGTTGGAGCCGGGGTCCGACTG +
Preference number: 5 (lower is better)
Translates to: VQGRPGDQVVLGAGH*GVGAALAVGAGVRL
Trigger: CAGTCGGACCCCGGCTCCAACAGCGAGCGCAGCACCGACTCCCCAGTGCCCGGCTCCGAGGACGACTTGGTCGCCGGGGCGACCCTGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS GCA 90 bp AAGGTGGGCCCTTTCGGAGTTTTGCTGGGCAGCTGCTGCCCTCTCTaGAGCGCGCTCACTCCCTGGAGCCTTCTTGTCAGCCAAAGGGCT +
Preference number: 5 (lower is better)
Translates to: KVGPFGVLLGSCCPL*SALTPWSLLVSQRA
Trigger: AGCCCTTTGGCTGACAAGAAGGCTCCAGGGAGTGAGCGCGCTGCAGAGAGGGCAGCAGCTGCCCAGCAAAACTCCGAAAGGGCCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS GCA 90 bp TTGACATATGATGACCGTGGAGCAAGGTGGGCCCTTTCGGAGTTTTaGTGGGCAGCTGCTGCCCTCTCTGCAGCGCGCTCACTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: LTYDDRGARWALSEF*WAAAALSAARSLPG
Trigger: TCCAGGGAGTGAGCGCGCTGCAGAGAGGGCAGCAGCTGCCCAGCAAAACTCCGAAAGGGCCCACCTTGCTCCACGGTCATCATATGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CCA 90 bp GTTTTGCTGGGCAGCTGCTGCCCTCTCTGCAGCGCGCTCACTCCCTaGAGCCTTCTTGTCAGCCAAAGGGCTTTCGGTAGCACTCAGTTC +
Preference number: 5 (lower is better)
Translates to: VLLGSCCPLCSALTP*SLLVSQRAFGSTQF
Trigger: GAACTGAGTGCTACCGAAAGCCCTTTGGCTGACAAGAAGGCTCCAGGGAGTGAGCGCGCTGCAGAGAGGGCAGCAGCTGCCCAGCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS GCA 90 bp GGGACATGCCAGGCCGGCAGGGCAGGATGCTGGGGATGGACTGGTTaGTATGGTAACCCCACTGCTTTCAAGTCCGAGGAGACATTTCCT +
Preference number: 5 (lower is better)
Translates to: GTCQAGRAGCWGWTG*YGNPTAFKSEETFP
Trigger: AGGAAATGTCTCCTCGGACTTGAAAGCAGTGGGGTTACCATAGCAACCAGTCCATCCCCAGCATCCTGCCCTGCCGGCCTGGCATGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS-3UTR CAA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTCTGCTCAGACCCACTaGTCTGGATGGACGGATCCC +
Preference number: 5 (lower is better)
Translates to: RVKARTKWSERKENQVACSAQTH*SGWTDP
Trigger: GGGATCCGTCCATCCAGACAAGTGGGTCTGAGCAGA...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGTGCTGCGCTCGCTGTaGGAGCCGGGGTCCGACTGC +
Preference number: 5 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLVLRSL*EPGSDC
Trigger: GCAGTCGGACCCCGGCTCCAACAGCGAGCGCAGCAC...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS GCA 90 bp CCATTTCGGTCTCTCCAGTTATCAGATTCGCTTCCACCTCCCAAGTaGTCACGACTGTTGGACCGTGAAAGGGACATGGATGAGCCCTCA +
Preference number: 5 (lower is better)
Translates to: PFRSLQLSDSLPPPK*SRLLDRERDMDEPS
Trigger: TGAGGGCTCATCCATGTCCCTTTCACGGTCCAACAGTCGTGAGCACTTGGGAGGTGGAAGCGAATCTGATAACTGGAGAGACCGAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS-3UTR CAA 90 bp ATGGCAAGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACGGCCCTTTCGGAGTTTaGCTGGGCAGCTGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: MASARVKARTKWSERKENGPFGV*LGSCCP
Trigger: AGGGCAGCAGCTGCCCAGCAAAACTCCGAAAGGGCC...GTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACTTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGTTGCCCAGGCCCAGTTaGCTGAAGAGCTCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRLPRPS*LKSSGR
Trigger: CCTCCCTGAGCTCTTCAGCAAACTGGGCCTGGGCAA...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp AAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGAACCTTCAGTGGGGCTaGATTTGGGAGATGTCTGCT +
Preference number: 5 (lower is better)
Translates to: KENQVACFTGRNKEASQRNLQWG*IWEMSA
Trigger: AGCAGACATCTCCCAAATCAAGCCCCACTGAAGGTT...CCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCAAGTGCTCACGACTGTaGGACCGTGAAAGGGACATG +
Preference number: 5 (lower is better)
Translates to: RVKARTKWSERKENQVACKCSRL*DRERDM
Trigger: CATGTCCCTTTCACGGTCCAACAGTCGTGAGCACTT...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS CCA 90 bp TCCAGTTATCAGATTCGCTTCCACCTCCCAAGTGCTCACGACTGTTaGACCGTGAAAGGGACATGGATGAGCCCTCATAAGTGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SSYQIRFHLPSAHDC*TVKGTWMSPHKWLS
Trigger: TGACAACCACTTATGAGGGCTCATCCATGTCCCTTTCACGGTCCAACAGTCGTGAGCACTTGGGAGGTGGAAGCGAATCTGATAACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS-3UTR CAA 90 bp GCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACGGATCCCCGTGATTaGCACTCAGCACTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: AQNGVRGKRTRWPASLGETDPRD*HSALFL
Trigger: GAGAAAAAGTGCTGAGTGCAAATCACGGGGATCCGT...TTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp AGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCGCCCTTCTCAACTCCTaGATAGTTTCAGCTGGCATG +
Preference number: 5 (lower is better)
Translates to: RVKARTKWSERKENQVACALLNS*IVSAGM
Trigger: CATGCCAGCTGAAACTATCAAGGAGTTGAGAAGGGC...GCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp GAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCAAGCCCTCATAAGTGGTaGTCATTGTGGGCTTATAGG +
Preference number: 5 (lower is better)
Translates to: ERKENQVACFTGRNKEASSPHKW*SLWAYR
Trigger: CCTATAAGCCCACAATGACAACCACTTATGAGGGCT...TGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS CCA 90 bp ACTGTTGATATGGACATCAACAGGAGTCAAGCCAGGAGGGGGAGATaGAGCTGTGTGCCCATAGGTGGGCACTCCAGACAACAAAATATT +
Preference number: 5 (lower is better)
Translates to: TVDMDINRSQARRGR*SCVPIGGHSRQQNI
Trigger: AATATTTTGTTGTCTGGAGTGCCCACCTATGGGCACACAGCTCCATCTCCCCCTCCTGGCTTGACTCCTGTTGATGTCCATATCAACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS-3UTR CAA 90 bp AGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGTTCACAATCACAGACTaGCTTGGCTGTTTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: RKENQVACFTGRNKEASQFTITD*LGCLGF
Trigger: AAAGCCCAAACAGCCAAGCAAGTCTGTGATTGTGAA...CTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp CACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGATCGGTCTGCATACTGTaGATATGGACATCAACAGGA +
Preference number: 5 (lower is better)
Translates to: HAQNGVRGKRTRWPASLGSVCIL*IWTSTG
Trigger: TCCTGTTGATGTCCATATCAACAGTATGCAGACCGA...TCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp AGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGTCAGTGGGGCTTGATTaGGGAGATGTCTGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: SARVKARTKWSERKENQVSVGLD*GDVCSD
Trigger: GTCTGAGCAGACATCTCCCAAATCAAGCCCCACTGA...CACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGAAGTGCTCACGACTGTaGGACCGTGAAAGGGACATG +
Preference number: 5 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRKCSRL*DRERDM
Trigger: CATGTCCCTTTCACGGTCCAACAGTCGTGAGCACTT...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS TCA 90 bp GGAGATGTCTGCTCAGACCCACTTGTCTGGATGGACGGATCCCCGTaGTTTGCACTCAGCACTTTTTCTCCAAGTGATGAAGTGGATATT +
Preference number: 5 (lower is better)
Translates to: GDVCSDPLVWMDGSP*FALSTFSPSDEVDI
Trigger: AATATCCACTTCATCACTTGGAGAAAAAGTGCTGAGTGCAAATCACGGGGATCCGTCCATCCAGACAAGTGGGTCTGAGCAGACATCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS TCA 90 bp AAGAATAGTGTAGCCAATGTTCCATGGATGATAGGCACAACCCCTTaGAGACAGGGTCATCCTGACTGGACTGCAAGCCCCTCACATAGT +
Preference number: 5 (lower is better)
Translates to: KNSVANVPWMIGTTP*RQGHPDWTASPSHS
Trigger: ACTATGTGAGGGGCTTGCAGTCCAGTCAGGATGACCCTGTCTTCAAGGGGTTGTGCCTATCATCCATGGAACATTGGCTACACTATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476684.1
CDS GCA 90 bp GGGGGTGCCCATAATGTGGGGCTGGGTGTACCAGAACTTGGACTTTaGAAAGGACTGACTGAGCTATTAAGAGCATTCAAGAGTGAGTTT +
Preference number: 5 (lower is better)
Translates to: GGAHNVGLGVPELGL*KGLTELLRAFKSEF
Trigger: AAACTCACTCTTGAATGCTCTTAATAGCTCAGTCAGTCCTTTGCAAAGTCCAAGTTCTGGTACACCCAGCCCCACATTATGGGCACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS GCA 90 bp GAGAGCAACCTGTCAGTGCTGTGTAAGTGTGAGTTTTTCGTGCCTTaGAATAGTTCCACTGTCTGCCTTTTGGCACAGGAAACCTTGGAG +
Preference number: 5 (lower is better)
Translates to: ESNLSVLCKCEFFVP*NSSTVCLLAQETLE
Trigger: CTCCAAGGTTTCCTGTGCCAAAAGGCAGACAGTGGAACTATTGCAAGGCACGAAAAACTCACACTTACACAGCACTGACAGGTTGCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CCA 90 bp GACAGACTCAATGGTGCCCTGGAGGTAGACGGTAGATTTCTTTTGTaGATTACTGGGATCAGGAAAGTGGATCTGAGCACCTGTTCTCTG +
Preference number: 5 (lower is better)
Translates to: DRLNGALEVDGRFLL*ITGIRKVDLSTCSL
Trigger: CAGAGAACAGGTGCTCAGATCCACTTTCCTGATCCCAGTAATCCACAAAAGAAATCTACCGTCTACCTCCAGGGCACCATTGAGTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp GCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAGACTTGCTTGGCTGTTaGGGCTTTGGTTTAATACTG +
Preference number: 5 (lower is better)
Translates to: AQNGVRGKRTRWPASLGEDLLGC*GFGLIL
Trigger: CAGTATTAAACCAAAGCCCAAACAGCCAAGCAAGTC...TTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp GCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAGTGAGTTTGGGGTTGTaGAAGTGTTCAGAGATAAGG +
Preference number: 5 (lower is better)
Translates to: AQNGVRGKRTRWPASLGEVSLGL*KCSEIR
Trigger: CCTTATCTCTGAACACTTCAACAACCCCAAACTCAC...TTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp AGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGAGTGAGTTTGGGGTaGTTGAAGTGTTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: RKENQVACFTGRNKEASQRVSLG*LKCSEI
Trigger: TATCTCTGAACACTTCAACAACCCCAAACTCACTCT...CTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp AAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGCATTCAAGAGTGAGTTaGGGGTTGTTGAAGTGTTCA +
Preference number: 5 (lower is better)
Translates to: KENQVACFTGRNKEASQRHSRVS*GLLKCS
Trigger: TGAACACTTCAACAACCCCAAACTCACTCTTGAATG...CCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGAACCTTCAGTGGGGCTaGATTTGGGAGATGTCTGCT +
Preference number: 5 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRNLQWG*IWEMSA
Trigger: AGCAGACATCTCCCAAATCAAGCCCCACTGAAGGTT...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp AAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGACATAAGTGGTTGTCATaGTGGGCTTATAGGACACAT +
Preference number: 5 (lower is better)
Translates to: KRTRWPASLGETRRLHRGHKWLS*WAYRTH
Trigger: ATGTGTCCTATAAGCCCACAATGACAACCACTTATG...TCCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp AGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGCAACGCTCACTTGATTaGTTTTGTTTACGCTTAGGG +
Preference number: 5 (lower is better)
Translates to: RKENQVACFTGRNKEASQQRSLD*FCLRLG
Trigger: CCCTAAGCGTAAACAAAACAAATCAAGTGAGCGTTG...CTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGCTCCGATCTTCAGTTTaGATGGCCAAGCAATCTGCG +
Preference number: 5 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRLRSSV*MAKQSA
Trigger: CGCAGATTGCTTGGCCATCAAAACTGAAGATCGGAG...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp ATGGCAAGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACTTGGCACAGGAAACCTaGGAGGGACACATCATCTGT +
Preference number: 5 (lower is better)
Translates to: MASARVKARTKWSERKENLAQET*EGHIIC
Trigger: ACAGATGATGTGTCCCTCCAAGGTTTCCTGTGCCAA...GTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACTTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGAAAACATCTGTGTATTaGCCCAGGCCCAGTTTGCTG +
Preference number: 5 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRKTSVY*PRPSLL
Trigger: CAGCAAACTGGGCCTGGGCAAATACACAGATGTTTT...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS GCA 90 bp CTGTGTAAGTGTGAGTTTTTCGTGCCTTGCAATAGTTCCACTGTCTaGCTTTTGGCACAGGAAACCTTGGAGGGACACATCATCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LCKCEFFVPCNSSTV*LLAQETLEGHIICF
Trigger: GAAACAGATGATGTGTCCCTCCAAGGTTTCCTGTGCCAAAAGGCAGACAGTGGAACTATTGCAAGGCACGAAAAACTCACACTTACACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CCA 90 bp AGTGTGAGTTTTTCGTGCCTTGCAATAGTTCCACTGTCTGCCTTTTaGCACAGGAAACCTTGGAGGGACACATCATCTGTTTCAAGTCAC +
Preference number: 5 (lower is better)
Translates to: SVSFSCLAIVPLSAF*HRKPWRDTSSVSSH
Trigger: GTGACTTGAAACAGATGATGTGTCCCTCCAAGGTTTCCTGTGCCAAAAGGCAGACAGTGGAACTATTGCAAGGCACGAAAAACTCACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS-3UTR CAA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGGACTTGCTTGGCTGTTaGGGCTTTGGTTTAATACTG +
Preference number: 5 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRDLLGC*GFGLIL
Trigger: CAGTATTAAACCAAAGCCCAAACAGCCAAGCAAGTC...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCATCTGCTCAGACCCACTaGTCTGGATGGACGGATCCC +
Preference number: 5 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKASAQTH*SGWTDP
Trigger: GGGATCCGTCCATCCAGACAAGTGGGTCTGAGCAGA...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGTCAGTGGGGCTTGATTaGGGAGATGTCTGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLSVGLD*GDVCSD
Trigger: GTCTGAGCAGACATCTCCCAAATCAAGCCCCACTGA...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTTGGCACAGGAAACCTaGGAGGGACACATCATCTGT +
Preference number: 5 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRLAQET*EGHIIC
Trigger: ACAGATGATGTGTCCCTCCAAGGTTTCCTGTGCCAA...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTGGCCCTTTCGGAGTTTaGCTGGGCAGCTGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIGPFGV*LGSCCP
Trigger: AGGGCAGCAGCTGCCCAGCAAAACTCCGAAAGGGCC...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp AAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAACAAGGAGGCTTCACAGAGGGAACAAATACAGTCTTaGGTTTGTGGAGCACAAATT +
Preference number: 5 (lower is better)
Translates to: KENQVACFTGRNKEASQREQIQS*VCGAQI
Trigger: AATTTGTGCTCCACAAACCAAAGACTGTATTTGTTC...CCTCTGTGAAGCCTCCTTGTTTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGATATGGGGATCTTTCTaGGATTTGGCTCCGATCTTC +
Preference number: 5 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRIWGSF*DLAPIF
Trigger: GAAGATCGGAGCCAAATCCAAGAAAGATCCCCATAT...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGGGGACAGTTTTCCCTTaGGCATATCAAAGCACTGTT +
Preference number: 5 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRGTVFP*AYQSTV
Trigger: AACAGTGCTTTGATATGCCAAAGGGAAAACTGTCCC...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGCATTCAAGAGTGAGTTaGGGGTTGTTGAAGTGTTCA +
Preference number: 5 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRHSRVS*GLLKCS
Trigger: TGAACACTTCAACAACCCCAAACTCACTCTTGAATG...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGCCCTTCTCAACTCCTaGATAGTTTCAGCTGGCATG +
Preference number: 5 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLALLNS*IVSAGM
Trigger: CATGCCAGCTGAAACTATCAAGGAGTTGAGAAGGGC...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp GCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGGCCTGCTTCACTGGGAGAAAATACAGTCTTTGGTTaGTGGAGCACAAATTTCACA +
Preference number: 5 (lower is better)
Translates to: AQNGVRGKRTRWPASLGENTVFG*WSTNFT
Trigger: TGTGAAATTTGTGCTCCACAAACCAAAGACTGTATT...TTCTCCCAGTGAAGCAGGCCACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGCTCTGCATGATATGTTaGATGTTGCTCCCATTTCGA +
Preference number: 5 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRLCMIC*MLLPFR
Trigger: TCGAAATGGGAGCAACATCAAACATATCATGCAGAG...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp AGTGCTAGAGTGAAAGCACGCACAAAATGGAGTGAGAGGAAAGAGAACCAGGTGATAAATAATTGCCCTTaGGTATGGCAAGTGCTAGAG +
Preference number: 5 (lower is better)
Translates to: SARVKARTKWSERKENQVINNCP*VWQVLE
Trigger: CTCTAGCACTTGCCATACCAAAGGGCAATTATTTAT...CACCTGGTTCTCTTTCCTCTCACTCCATTTTGTGCGTGCTTTCACTCTAGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263103.1
CDS-3UTR CAA 90 bp CAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTTTAAGTTACAGCCATaGCTTCCTGTCAGCGAGGAA +
Preference number: 5 (lower is better)
Translates to: QMHGRQLGKELQDYYLGRFKLQP*LPVSEE
Trigger: TTCCTCGCTGACAGGAAGCAATGGCTGTAACTTAAA...CCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGGGGAGGTCAGAACCTTaGAAAGAGCTATTTAAGTTA +
Preference number: 5 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRGRSEP*KELFKL
Trigger: TAACTTAAATAGCTCTTTCAAAGGTTCTGACCTCCC...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGCTCGGGCTCCAGTTATaGAATGTCGTCCATTCTCTA +
Preference number: 5 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLLGLQL*NVVHSL
Trigger: TAGAGAATGGACGACATTCAATAACTGGAGCCCGAG...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCATTCTACTCCTGCTGGTaGTCCCGCTATAGATACCTG +
Preference number: 5 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKAFYSCW*SRYRYL
Trigger: CAGGTATCTATAGCGGGACAACCAGCAGGAGTAGAA...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp TGCTGTGAAGGCTGTTCATACATCTCCTGTGTCCACTTTACAGTTAGTCAGCGGTATTTAGTTCTGAAATaGCAAGCAGCATTTTCCTCC +
Preference number: 5 (lower is better)
Translates to: CCEGCSYISCVHFTVSQRYLVLK*QAAFSS
Trigger: GGAGGAAAATGCTGCTTGCAATTTCAGAACTAAATA...CCGCTGACTAACTGTAAAGTGGACACAGGAGATGTATGAACAGCCTTCACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGTGTGAACTAGGTCCATaGCTAGGTGTTTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLCELGP*LGVSRM
Trigger: CATCCTAGAAACACCTAGCAATGGACCTAGTTCACA...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS TCA 90 bp ACGGTAGATTTCTTTTGTGGATTACTGGGATCAGGAAAGTGGATCTaGGCACCTGTTCTCTGCATGATATGTTTGATGTTGCTCCCATTT +
Preference number: 5 (lower is better)
Translates to: TVDFFCGLLGSGKWI*APVLCMICLMLLPF
Trigger: AAATGGGAGCAACATCAAACATATCATGCAGAGAACAGGTGCTCAGATCCACTTTCCTGATCCCAGTAATCCACAAAAGAAATCTACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGCATAAGTGGTTGTCATaGTGGGCTTATAGGACACAT +
Preference number: 5 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLHKWLS*WAYRTH
Trigger: ATGTGTCCTATAAGCCCACAATGACAACCACTTATG...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCATCGGTCTGCATACTGTaGATATGGACATCAACAGGA +
Preference number: 5 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKASVCIL*IWTSTG
Trigger: TCCTGTTGATGTCCATATCAACAGTATGCAGACCGA...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTACGGATCCCCGTGATTaGCACTCAGCACTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: NKITSKSSGIPDVNSSFITDPRD*HSALFL
Trigger: GAGAAAAAGTGCTGAGTGCAAATCACGGGGATCCGT...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGTTCAGTGTGACTCGATaGCTTTTTGTGTCTAAGACA +
Preference number: 5 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLFSVTR*LFVSKT
Trigger: TGTCTTAGACACAAAAAGCAATCGAGTCACACTGAA...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCAAAGAGGTGCGTGCATTaGGCGATTCAAAAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKAKRCVH*AIQKAF
Trigger: GAAAGCTTTTTGAATCGCCAAATGCACGCACCTCTT...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp CTGTTGCAAATGCATGGTAGACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGTACTGCAAAGTCCATTaGGTCTTTCTTTGCACCTAT +
Preference number: 5 (lower is better)
Translates to: LLQMHGRQLGKELQDYYLYCKVH*VFLCTY
Trigger: ATAGGTGCAAAGAAAGACCAAATGGACTTTGCAGTA...CAGATAATAATCTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp ACAGCTGGGAAAAGAGCTCCAAGATTATTATCTGGGAAGGTCTTATTAAAAGCAAGAGTGAGTTTGGGGTaGTTGAAGTGTTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: TAGKRAPRLLSGKVLLKARVSLG*LKCSEI
Trigger: TATCTCTGAACACTTCAACAACCCCAAACTCACTCT...TGCTTTTAATAAGACCTTCCCAGATAATAATCTTGGAGCTCTTTTCCCAGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTAGCCCTCATAAGTGGTaGTCATTGTGGGCTTATAGG +
Preference number: 5 (lower is better)
Translates to: NKITSKSSGIPDVNSSFISPHKW*SLWAYR
Trigger: CCTATAAGCCCACAATGACAACCACTTATGAGGGCT...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTAGGATCAGGAACCGGTaGAAGAATTCCAGCAATTGG +
Preference number: 5 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIRIRNR*KNSSNW
Trigger: CCAATTGCTGGAATTCTTCAACCGGTTCCTGATCCT...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCATGATATGTTTGATGTaGCTCCCATTTCGACCCATC +
Preference number: 5 (lower is better)
Translates to: IGPEASGLTYISQNHRIFMICLM*LPFRPI
Trigger: GATGGGTCGAAATGGGAGCAACATCAAACATATCAT...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTTTCACAATCACAGACTaGCTTGGCTGTTTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: NKITSKSSGIPDVNSSFIFTITD*LGCLGF
Trigger: AAAGCCCAAACAGCCAAGCAAGTCTGTGATTGTGAA...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCATATTGTTGCCACCTTaGCCGATTACATGTGAATGT +
Preference number: 5 (lower is better)
Translates to: IGPEASGLTYISQNHRIFILLPP*PITCEC
Trigger: ACATTCACATGTAATCGGCAAAGGTGGCAACAATAT...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp AACAAAATAACTTCTAAGTCTTCTGGCATCCCAGATGTCAATTCATCCTTCATTACAACCCATGAGATATaGCCTTGCAAGACAGACAGA +
Preference number: 5 (lower is better)
Translates to: NKITSKSSGIPDVNSSFITTHEI*PCKTDR
Trigger: TCTGTCTGTCTTGCAAGGCAATATCTCATGGGTTGT...AATGAAGGATGAATTGACATCTGGGATGCCAGAAGACTTAGAAGTTATTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp ATTGGTCCAGAAGCAAGTGGACTCACTTACATTTCCCAAAATCACAGAATATTCAAGATCGATCTCTTGTaGCTGGAAAACATCTGTGTA +
Preference number: 5 (lower is better)
Translates to: IGPEASGLTYISQNHRIFKIDLL*LENICV
Trigger: TACACAGATGTTTTCCAGCAACAAGAGATCGATCTT...GAATATTCTGTGATTTTGGGAAATGTAAGTGAGTCCACTTGCTTCTGGACCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATGGATCTTTCTTGGATTaGGCTCCGATCTTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNGSFLD*APIFSF
Trigger: AAAACTGAAGATCGGAGCCAAATCCAAGAAAGATCC...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS-3UTR CAA 90 bp ACTTCCATAGGACAAGAAATTAGAACGTGTAAAGTGCTGAAAGACCACAATAATCTGAAGATCGATCTCTaGTTGCTGGAAAACATCTGT +
Preference number: 5 (lower is better)
Translates to: TSIGQEIRTCKVLKDHNNLKIDL*LLENIC
Trigger: ACAGATGTTTTCCAGCAACAAGAGATCGATCTTCAG...ATTATTGTGGTCTTTCAGCACTTTACACGTTCTAATTTCTTGTCCTATGGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS CCA 72 bp AGCCGGGCACTGGGGAGTCGGTGCTGCGCTCGCTGTTaGAGCCGGGGTCCGACTGCGCCGCCAGGTAGCCGG +
Preference number: 6 (lower is better)
Translates to: SRALGSRCCARC*SRGPTAPPGSR
Trigger: CCGGCTACCTGGCGGCGCAGTCGGACCCCGGCTCCAACAGCGAGCGCAGCACCGACTCCCCAGTGCCCGGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS CCA 72 bp CGCCCCGGCGACCAAGTCGTCCTCGGAGCCGGGCACTaGGGAGTCGGTGCTGCGCTCGCTGTTGGAGCCGGG +
Preference number: 6 (lower is better)
Translates to: RPGDQVVLGAGH*GVGAALAVGAG
Trigger: CCCGGCTCCAACAGCGAGCGCAGCACCGACTCCCCAGTGCCCGGCTCCGAGGACGACTTGGTCGCCGGGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS GCA 72 bp AGTCGTCCTCGGAGCCGGGCACTGGGGAGTCGGTGCTaGGCTCGCTGTTGGAGCCGGGGTCCGACTGCGCCG +
Preference number: 6 (lower is better)
Translates to: SRPRSRALGSRC*ARCWSRGPTAP
Trigger: CGGCGCAGTCGGACCCCGGCTCCAACAGCGAGCGCAGCACCGACTCCCCAGTGCCCGGCTCCGAGGACGACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS GCA 72 bp CCAAGTCGTCCTCGGAGCCGGGCACTGGGGAGTCGGTaGTGCGCTCGCTGTTGGAGCCGGGGTCCGACTGCG +
Preference number: 6 (lower is better)
Translates to: PSRPRSRALGSR*CARCWSRGPTA
Trigger: CGCAGTCGGACCCCGGCTCCAACAGCGAGCGCAGCACCGACTCCCCAGTGCCCGGCTCCGAGGACGACTTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS GCA 72 bp TCCACGCGGAAGCGCTCCTCGCTCCACTCCGGGCTGTaGAGGGTCGCCCCGGCGACCAAGTCGTCCTCGGAG +
Preference number: 6 (lower is better)
Translates to: STRKRSSLHSGL*RVAPATKSSSE
Trigger: CTCCGAGGACGACTTGGTCGCCGGGGCGACCCTGCACAGCCCGGAGTGGAGCGAGGAGCGCTTCCGCGTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS GCA 72 bp GATGACCGTGGAGCAAGGTGGGCCCTTTCGGAGTTTTaGTGGGCAGCTGCTGCCCTCTCTGCAGCGCGCTCA +
Preference number: 6 (lower is better)
Translates to: DDRGARWALSEF*WAAAALSAARS
Trigger: TGAGCGCGCTGCAGAGAGGGCAGCAGCTGCCCAGCAAAACTCCGAAAGGGCCCACCTTGCTCCACGGTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS GCA 72 bp CCTTTCGGAGTTTTGCTGGGCAGCTGCTGCCCTCTCTaGAGCGCGCTCACTCCCTGGAGCCTTCTTGTCAGC +
Preference number: 6 (lower is better)
Translates to: PFGVLLGSCCPL*SALTPWSLLVS
Trigger: GCTGACAAGAAGGCTCCAGGGAGTGAGCGCGCTGCAGAGAGGGCAGCAGCTGCCCAGCAAAACTCCGAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CAA 90 bp GCAGCTGCTGCCCTCTCTGCAGCGCGCTCACTCCCTGGAGCCTTCTaGTCAGCCAAAGGGCTTTCGGTAGCACTCAGTTCAGGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: AAAALSAARSLPGAF*SAKGLSVALSSGSE
Trigger: CTCAGACCCTGAACTGAGTGCTACCGAAAGCCCTTTGGCTGACAAGAAGGCTCCAGGGAGTGAGCGCGCTGCAGAGAGGGCAGCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS GCA 72 bp CAGGCCGGCAGGGCAGGATGCTGGGGATGGACTGGTTaGTATGGTAACCCCACTGCTTTCAAGTCCGAGGAG +
Preference number: 6 (lower is better)
Translates to: QAGRAGCWGWTG*YGNPTAFKSEE
Trigger: CTCCTCGGACTTGAAAGCAGTGGGGTTACCATAGCAACCAGTCCATCCCCAGCATCCTGCCCTGCCGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CAA 72 bp GCCCTCTCTGCAGCGCGCTCACTCCCTGGAGCCTTCTaGTCAGCCAAAGGGCTTTCGGTAGCACTCAGTTCA +
Preference number: 6 (lower is better)
Translates to: ALSAARSLPGAF*SAKGLSVALSS
Trigger: TGAACTGAGTGCTACCGAAAGCCCTTTGGCTGACAAGAAGGCTCCAGGGAGTGAGCGCGCTGCAGAGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CCA 72 bp GCCTGCATGTTGACATATGATGACCGTGGAGCAAGGTaGGCCCTTTCGGAGTTTTGCTGGGCAGCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: ACMLTYDDRGAR*ALSEFCWAAAA
Trigger: GGCAGCAGCTGCCCAGCAAAACTCCGAAAGGGCCCACCTTGCTCCACGGTCATCATATGTCAACATGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS GCA 72 bp TTACAGTTAGTCAGCGGGCATGTGCCAAGAGGGTGCTaGTACCAGCGGCCACTGACACTAGCAATGTCTGAG +
Preference number: 6 (lower is better)
Translates to: LQLVSGHVPRGC*YQRPLTLAMSE
Trigger: CTCAGACATTGCTAGTGTCAGTGGCCGCTGGTAGCAGCACCCTCTTGGCACATGCCCGCTGACTAACTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS GCA 72 bp TTACAACCTTCAGTGGGGCTTGATTTGGGAGATGTCTaGTCAGACCCACTTGTCTGGATGGACGGATCCCCG +
Preference number: 6 (lower is better)
Translates to: LQPSVGLDLGDV*SDPLVWMDGSP
Trigger: CGGGGATCCGTCCATCCAGACAAGTGGGTCTGAGCAGACATCTCCCAAATCAAGCCCCACTGAAGGTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS GCA 72 bp ACTTTACAGTTAGTCAGCGGGCATGTGCCAAGAGGGTaGTGCTACCAGCGGCCACTGACACTAGCAATGTCT +
Preference number: 6 (lower is better)
Translates to: TLQLVSGHVPRG*CYQRPLTLAMS
Trigger: AGACATTGCTAGTGTCAGTGGCCGCTGGTAGCAGCACCCTCTTGGCACATGCCCGCTGACTAACTGTAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS CCA 72 bp CAGATTCGCTTCCACCTCCCAAGTGCTCACGACTGTTaGACCGTGAAAGGGACATGGATGAGCCCTCATAAG +
Preference number: 6 (lower is better)
Translates to: QIRFHLPSAHDC*TVKGTWMSPHK
Trigger: CTTATGAGGGCTCATCCATGTCCCTTTCACGGTCCAACAGTCGTGAGCACTTGGGAGGTGGAAGCGAATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CAA 72 bp TGGGGCTTGATTTGGGAGATGTCTGCTCAGACCCACTaGTCTGGATGGACGGATCCCCGTGATTTGCACTCA +
Preference number: 6 (lower is better)
Translates to: WGLIWEMSAQTH*SGWTDPRDLHS
Trigger: TGAGTGCAAATCACGGGGATCCGTCCATCCAGACAAGTGGGTCTGAGCAGACATCTCCCAAATCAAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CAA 90 bp AACCTTCAGTGGGGCTTGATTTGGGAGATGTCTGCTCAGACCCACTaGTCTGGATGGACGGATCCCCGTGATTTGCACTCAGCACTTTTT +
Preference number: 6 (lower is better)
Translates to: NLQWGLIWEMSAQTH*SGWTDPRDLHSALF
Trigger: AAAAAGTGCTGAGTGCAAATCACGGGGATCCGTCCATCCAGACAAGTGGGTCTGAGCAGACATCTCCCAAATCAAGCCCCACTGAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS GCA 72 bp TCTCTCCAGTTATCAGATTCGCTTCCACCTCCCAAGTaGTCACGACTGTTGGACCGTGAAAGGGACATGGAT +
Preference number: 6 (lower is better)
Translates to: SLQLSDSLPPPK*SRLLDRERDMD
Trigger: ATCCATGTCCCTTTCACGGTCCAACAGTCGTGAGCACTTGGGAGGTGGAAGCGAATCTGATAACTGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS GCA 72 bp GTAGCCTTCCACTCGCTCCACCTTCCAGGAAAGAGGTaGGTGCATTTGGCGATTCAAAAAGCTTTCTTCGGT +
Preference number: 6 (lower is better)
Translates to: VAFHSLHLPGKR*VHLAIQKAFFG
Trigger: ACCGAAGAAAGCTTTTTGAATCGCCAAATGCACGCACCTCTTTCCTGGAAGGTGGAGCGAGTGGAAGGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS CAA 72 bp CAGACCCACTTGTCTGGATGGACGGATCCCCGTGATTaGCACTCAGCACTTTTTCTCCAAGTGATGAAGTGG +
Preference number: 6 (lower is better)
Translates to: QTHLSGWTDPRD*HSALFLQVMKW
Trigger: CCACTTCATCACTTGGAGAAAAAGTGCTGAGTGCAAATCACGGGGATCCGTCCATCCAGACAAGTGGGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS TCA 72 bp TGCTCAGACCCACTTGTCTGGATGGACGGATCCCCGTaGTTTGCACTCAGCACTTTTTCTCCAAGTGATGAA +
Preference number: 6 (lower is better)
Translates to: CSDPLVWMDGSP*FALSTFSPSDE
Trigger: TTCATCACTTGGAGAAAAAGTGCTGAGTGCAAATCACGGGGATCCGTCCATCCAGACAAGTGGGTCTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS GCA 72 bp CAGCTCCCGAATTCTAACTCGGGCAGATTCTACTCCTaGTGGTTGTCCCGCTATAGATACCTGGTTGCTTTT +
Preference number: 6 (lower is better)
Translates to: QLPNSNSGRFYS*WLSRYRYLVAF
Trigger: AAAAGCAACCAGGTATCTATAGCGGGACAACCAGCAGGAGTAGAATCTGCCCGAGTTAGAATTCGGGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS CCA 72 bp ATTTGGGAGATGTCTGCTCAGACCCACTTGTCTGGATaGACGGATCCCCGTGATTTGCACTCAGCACTTTTT +
Preference number: 6 (lower is better)
Translates to: IWEMSAQTHLSG*TDPRDLHSALF
Trigger: AAAAAGTGCTGAGTGCAAATCACGGGGATCCGTCCATCCAGACAAGTGGGTCTGAGCAGACATCTCCCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CAA 90 bp ATGTCTGCTCAGACCCACTTGTCTGGATGGACGGATCCCCGTGATTaGCACTCAGCACTTTTTCTCCAAGTGATGAAGTGGATATTGCAC +
Preference number: 6 (lower is better)
Translates to: MSAQTHLSGWTDPRD*HSALFLQVMKWILH
Trigger: GTGCAATATCCACTTCATCACTTGGAGAAAAAGTGCTGAGTGCAAATCACGGGGATCCGTCCATCCAGACAAGTGGGTCTGAGCAGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS GCA 72 bp TGTGAGTTTTTCGTGCCTTGCAATAGTTCCACTGTCTaGCTTTTGGCACAGGAAACCTTGGAGGGACACATC +
Preference number: 6 (lower is better)
Translates to: CEFFVPCNSSTV*LLAQETLEGHI
Trigger: GATGTGTCCCTCCAAGGTTTCCTGTGCCAAAAGGCAGACAGTGGAACTATTGCAAGGCACGAAAAACTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CCA 72 bp GGGACATGGATGAGCCCTCATAAGTGGTTGTCATTGTaGGCTTATAGGACACATGATTGGCCCTTCTCAACT +
Preference number: 6 (lower is better)
Translates to: GTWMSPHKWLSL*AYRTHDWPFST
Trigger: AGTTGAGAAGGGCCAATCATGTGTCCTATAAGCCCACAATGACAACCACTTATGAGGGCTCATCCATGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CAA 72 bp TGCTGGAAAACATCTGTGTATTTGCCCAGGCCCAGTTaGCTGAAGAGCTCAGGGAGGTCAGAACCTTTGAAA +
Preference number: 6 (lower is better)
Translates to: CWKTSVYLPRPS*LKSSGRSEPLK
Trigger: TTTCAAAGGTTCTGACCTCCCTGAGCTCTTCAGCAAACTGGGCCTGGGCAAATACACAGATGTTTTCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS CAA 90 bp ACAGACAGACTCAATGGTGCCCTGGAGGTAGACGGTAGATTTCTTTaGTGGATTACTGGGATCAGGAAAGTGGATCTGAGCACCTGTTCT +
Preference number: 6 (lower is better)
Translates to: TDRLNGALEVDGRFL*WITGIRKVDLSTCS
Trigger: AGAACAGGTGCTCAGATCCACTTTCCTGATCCCAGTAATCCACAAAAGAAATCTACCGTCTACCTCCAGGGCACCATTGAGTCTGTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS GCA 72 bp CTGTCAGTGCTGTGTAAGTGTGAGTTTTTCGTGCCTTaGAATAGTTCCACTGTCTGCCTTTTGGCACAGGAA +
Preference number: 6 (lower is better)
Translates to: LSVLCKCEFFVP*NSSTVCLLAQE
Trigger: TTCCTGTGCCAAAAGGCAGACAGTGGAACTATTGCAAGGCACGAAAAACTCACACTTACACAGCACTGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CCA 72 bp TTTTCGTGCCTTGCAATAGTTCCACTGTCTGCCTTTTaGCACAGGAAACCTTGGAGGGACACATCATCTGTT +
Preference number: 6 (lower is better)
Translates to: FSCLAIVPLSAF*HRKPWRDTSSV
Trigger: AACAGATGATGTGTCCCTCCAAGGTTTCCTGTGCCAAAAGGCAGACAGTGGAACTATTGCAAGGCACGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CCA 72 bp ATGATTGGCCCTTCTCAACTCCTTGATAGTTTCAGCTaGCATGGATTTAGAAAAACCCAGGCCACTCCAGGT +
Preference number: 6 (lower is better)
Translates to: MIGPSQLLDSFS*HGFRKTQATPG
Trigger: ACCTGGAGTGGCCTGGGTTTTTCTAAATCCATGCCAGCTGAAACTATCAAGGAGTTGAGAAGGGCCAATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CAA 72 bp AAAGGGACATGGATGAGCCCTCATAAGTGGTTGTCATaGTGGGCTTATAGGACACATGATTGGCCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: KGTWMSPHKWLS*WAYRTHDWPFS
Trigger: TGAGAAGGGCCAATCATGTGTCCTATAAGCCCACAATGACAACCACTTATGAGGGCTCATCCATGTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CAA 90 bp AAGTGTGAGTTTTTCGTGCCTTGCAATAGTTCCACTGTCTGCCTTTaGGCACAGGAAACCTTGGAGGGACACATCATCTGTTTCAAGTCA +
Preference number: 6 (lower is better)
Translates to: KCEFFVPCNSSTVCL*AQETLEGHIICFKS
Trigger: TGACTTGAAACAGATGATGTGTCCCTCCAAGGTTTCCTGTGCCAAAAGGCAGACAGTGGAACTATTGCAAGGCACGAAAAACTCACACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CAA 90 bp ATCTCTTGTTGCTGGAAAACATCTGTGTATTTGCCCAGGCCCAGTTaGCTGAAGAGCTCAGGGAGGTCAGAACCTTTGAAAGAGCTATTT +
Preference number: 6 (lower is better)
Translates to: ISCCWKTSVYLPRPS*LKSSGRSEPLKELF
Trigger: AAATAGCTCTTTCAAAGGTTCTGACCTCCCTGAGCTCTTCAGCAAACTGGGCCTGGGCAAATACACAGATGTTTTCCAGCAACAAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS GCA 72 bp CATAATGTGGGGCTGGGTGTACCAGAACTTGGACTTTaGAAAGGACTGACTGAGCTATTAAGAGCATTCAAG +
Preference number: 6 (lower is better)
Translates to: HNVGLGVPELGL*KGLTELLRAFK
Trigger: CTTGAATGCTCTTAATAGCTCAGTCAGTCCTTTGCAAAGTCCAAGTTCTGGTACACCCAGCCCCACATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS TCA 72 bp GGGATCTTTCTTGGATTTGGCTCCGATCTTCAGTTTTaGTGGCCAAGCAATCTGCGTATTTGTTTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: GIFLGFGSDLQF*WPSNLRICFLH
Trigger: ATGGAGGAAACAAATACGCAGATTGCTTGGCCATCAAAACTGAAGATCGGAGCCAAATCCAAGAAAGATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS CAA 72 bp AGTAAAGCCTACTCTAGGCTAGTAACACAAAGTAGCTaGAGGTCTGGAATTAGAATCCTGACAGCCCCATTT +
Preference number: 6 (lower is better)
Translates to: SKAYSRLVTQSS*RSGIRILTAPF
Trigger: AAATGGGGCTGTCAGGATTCTAATTCCAGACCTCAAGCTACTTTGTGTTACTAGCCTAGAGTAGGCTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476684.1
CDS TCA 72 bp TTCTTTTGTGGATTACTGGGATCAGGAAAGTGGATCTaGGCACCTGTTCTCTGCATGATATGTTTGATGTTG +
Preference number: 6 (lower is better)
Translates to: FFCGLLGSGKWI*APVLCMICLML
Trigger: CAACATCAAACATATCATGCAGAGAACAGGTGCTCAGATCCACTTTCCTGATCCCAGTAATCCACAAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS TCA 72 bp TCAGCGAGGAAATGCAGTCCATGTAATTGCTACTGCTaGGATAGTGTTCCGTTGATTTGTTTTGTTTACGCT +
Preference number: 6 (lower is better)
Translates to: SARKCSPCNCYC*DSVPLICFVYA
Trigger: AGCGTAAACAAAACAAATCAACGGAACACTATCTCAGCAGTAGCAATTACATGGACTGCATTTCCTCGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373886.8
CDS GCA 72 bp TTTGTTTTGTTTACGCTTAGGGCTGCCAATAGAAGCTaGAAATTCACTATGACTTCCAGGTCCAATTCCATT +
Preference number: 6 (lower is better)
Translates to: FVLFTLRAANRS*KFTMTSRSNSI
Trigger: AATGGAATTGGACCTGGAAGTCATAGTGAATTTGCAGCTTCTATTGGCAGCCCTAAGCGTAAACAAAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CCA 72 bp TTTCACAATCACAGACTTGCTTGGCTGTTTGGGCTTTaGTTTAATACTGATGAAGACATCAAGCTGTTCCAT +
Preference number: 6 (lower is better)
Translates to: FHNHRLAWLFGL*FNTDEDIKLFH
Trigger: ATGGAACAGCTTGATGTCTTCATCAGTATTAAACCAAAGCCCAAACAGCCAAGCAAGTCTGTGATTGTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CAA 90 bp CGTGATTTGCACTCAGCACTTTTTCTCCAAGTGATGAAGTGGATATaGCACCATATTTTATATCTGGAGACTGTGCATGTCCATTTAAAG +
Preference number: 6 (lower is better)
Translates to: RDLHSALFLQVMKWI*HHILYLETVHVHLK
Trigger: CTTTAAATGGACATGCACAGTCTCCAGATATAAAATATGGTGCAATATCCACTTCATCACTTGGAGAAAAAGTGCTGAGTGCAAATCACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8
CDS CCA 72 bp GATTTGCACTCAGCACTTTTTCTCCAAGTGATGAAGTaGATATTGCACCATATTTTATATCTGGAGACTGTG +
Preference number: 6 (lower is better)
Translates to: DLHSALFLQVMK*ILHHILYLETV
Trigger: CACAGTCTCCAGATATAAAATATGGTGCAATATCCACTTCATCACTTGGAGAAAAAGTGCTGAGTGCAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263103.1
ENST00000373886.8