Pregenerated sensors for BHLHE23 (Homo sapiens)
Ensembl gene IDs: ENSG00000125533Ensembl transcript IDs: ENST00000370346.2, ENST00000612929.2
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGGCCCCCGACAGCGACTTaGGCTCGGCCATGGCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: PGRETVTGAIGGRVREGRPPTAT*ARPWPR Trigger: GCGCGGCCATGGCCGAGCTCAAGTCGCTGTCGGGGG...CCGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR TCA 90 bp | GGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGGGGCCCCCGACAGCGACTTaGGCTCGGCCATGGCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: GQRDSHRGDRRTRAGGPGPPTAT*ARPWPR Trigger: GCGCGGCCATGGCCGAGCTCAAGTCGCTGTCGGGGG...CCCCGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR TCA 90 bp | CCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGGGGATGCTCATGTGGGTaGGCAGCCCCCGAGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: PGRETVTGAIGGRVREGRGCSCG*AAPEAG Trigger: GCCGGCCTCGGGGGCTGCTCACCCACATGAGCATCC...CCGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | GGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGGGGCGGGGGCTCGCCGGGTaGGCGGATGCTCATGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GQRDSHRGDRRTRAGGPGRGLAG*ADAHVG Trigger: ACCCACATGAGCATCCGCCCACCCGGCGAGCCCCCG...CCCCGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | TCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGGGCGCGGCCAGGCCCTaGCCCTGGTTGAGGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SGQRDSHRGDRRTRAGGPGAARP*PWLRKA Trigger: GGCCTTCCTCAACCAGGGCCAGGGCCTGGCCGCGCC...CGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR GCA 90 bp | GTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCCCCCAGGGCGGCGCCTaGGGAGAAGGGGCACACAGT | + |
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Preference number: 4 (lower is better) Translates to: VRAERQSQGRSEDACGRAPQGGA*GEGAHS Trigger: ACTGTGTGCCCCTTCTCCGCAGGCGCCGCCCTGGGG...GGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGAC 72% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | GTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCCGCGGAGGCGCCCGGTaGGACCTCGCTGCTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: VRAERQSQGRSEDACGRARGGAR*DLAAVQ Trigger: TTGGACAGCAGCGAGGTCCCACCGGGCGCCTCCGCG...GGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370346.2 |
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| CDS-3UTR CCA 90 bp | CGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGGGGGGCGGATGCTCATGTaGGTGAGCAGCCCCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: RAERQSQGRSEDACGRAGGRMLM*VSSPRG Trigger: GCCTCGGGGGCTGCTCACCCACATGAGCATCCGCCC...CCCGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCG 72% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | CCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGGGGGCGGATGCTCATGTaGGTGAGCAGCCCCCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PGRETVTGAIGGRVREGRGRMLM*VSSPRG Trigger: GCCTCGGGGGCTGCTCACCCACATGAGCATCCGCCC...CCGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | TGTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCGGCGCGGCCAGGCCCTaGCCCTGGTTGAGGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: CPGRETVTGAIGGRVREGGAARP*PWLRKA Trigger: GGCCTTCCTCAACCAGGGCCAGGGCCTGGCCGCGCC...GCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGACA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | CCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGGGGGCACACAGTGGCCTaGCCGAAGGGCGTCAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PGRETVTGAIGGRVREGRGHTVA*PKGVKG Trigger: GCCCTTGACGCCCTTCGGCCAGGCCACTGTGTGCCC...CCGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR TCA 90 bp | TGTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCGGATGCTCATGTGGGTaGGCAGCCCCCGAGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: CPGRETVTGAIGGRVREGGCSCG*AAPEAG Trigger: GCCGGCCTCGGGGGCTGCTCACCCACATGAGCATCC...GCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGACA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR GCA 90 bp | TCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGCGCGTCGGTCTGGCTTaGCTGCGGGTCCCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SGQRDSHRGDRRTRAGGPRVGLA*LRVPEP Trigger: AGGCTCTGGGACCCGCAGGCAAGCCAGACCGACGCG...CGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | TCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGCTCTGCGCGTCGGTCTaGCTTGCCTGCGGGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SGQRDSHRGDRRTRAGGPLCASV*LACGSQ Trigger: CTGGGACCCGCAGGCAAGCCAGACCGACGCGCAGAG...CGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | GTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGCCAGGCCCTGGCCCTaGTTGAGGAAGGCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: VRAERQSQGRSEDACGRAARPWP*LRKATR Trigger: CCTGGTGGCCTTCCTCAACCAGGGCCAGGGCCTGGC...GGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR GCA 90 bp | CTGTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCGCGTCGGTCTGGCTTaGCTGCGGGTCCCAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LSGQRDSHRGDRRTRAGGRVGLA*LRVPEP Trigger: AGGCTCTGGGACCCGCAGGCAAGCCAGACCGACGCG...CCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGACAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR GCA 90 bp | TGTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGTTTAGGTCGTGCATaGGCCGCCGCTCGCGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: CPGRETVTGAIGGRVREGRLGRA*AAARAR Trigger: ACGCGCGCGAGCGGCGGCGCATGCACGACCTAAACG...GCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGACA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | CTGTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCTCTGCGCGTCGGTCTaGCTTGCCTGCGGGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSGQRDSHRGDRRTRAGGLCASV*LACGSQ Trigger: CTGGGACCCGCAGGCAAGCCAGACCGACGCGCAGAG...CCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGACAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | CTGTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGGCCAGGCCCTGGCCCTaGTTGAGGAAGGCCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LSGQRDSHRGDRRTRAGGARPWP*LRKATR Trigger: CCTGGTGGCCTTCCTCAACCAGGGCCAGGGCCTGGC...CCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGACAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | TGTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCGGGCACACAGTGGCCTaGCCGAAGGGCGTCAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: CPGRETVTGAIGGRVREGGHTVA*PKGVKG Trigger: GCCCTTGACGCCCTTCGGCCAGGCCACTGTGTGCCC...GCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGACA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | TCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGAGAAGGGGCACACAGTaGCCTGGCCGAAGGGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: SGQRDSHRGDRRTRAGGPRRGTQ*PGRRAS Trigger: TGACGCCCTTCGGCCAGGCCACTGTGTGCCCCTTCT...CGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR TCA 90 bp | CGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGGGGGTCACGGCTTCTCGTaGCAGTGTTTGCAAAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: RAERQSQGRSEDACGRAGGHGFS*QCLQSA Trigger: CGCGCTTTGCAAACACTGTCACGAGAAGCCGTGACC...CCCGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR GCA 90 bp | CTCCAGGCCTTTCCTGTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACCGTTTAGGTCGTGCATaGGCCGCCGCTCGCGCGCGT | + |
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Preference number: 4 (lower is better) Translates to: LQAFPVRAERQSQGRSEDRLGRA*AAARAR Trigger: ACGCGCGCGAGCGGCGGCGCATGCACGACCTAAACG...GTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGACAGGAAAGGCCTGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612929.2 |
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| CDS-3UTR GCA 90 bp | TCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGTCTCGTGACAGTGTTTaGAAAGCGCGGAGGGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: SGQRDSHRGDRRTRAGGPSRDSV*KARRAS Trigger: GGACGCCCTCCGCGCTTTGCAAACACTGTCACGAGA...CGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR GCA 90 bp | GGTCCCTCCAGGCCTTTCCTGTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGCCCCTCCTCCTGGTCTaGAGGGTCCCTCCAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GPSRPFLSGQRDSHRGDRPLLLV*RVPPGL Trigger: AAGGCCTGGAGGGACCCTGCAGACCAGGAGGAGGGG...CCGATCGCCCCTGTGACTGTCTCTCTGCCCGGACAGGAAAGGCCTGGAGGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612929.2 |
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| CDS-3UTR CCA 90 bp | GGGTCCCTCCAGGCCTTTCCTGTCCGGGCAGAGAGACAGTCACAGGGGCGATCGAGAAGGGGCACACAGTaGCCTGGCCGAAGGGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: GSLQAFPVRAERQSQGRSRRGTQ*PGRRAS Trigger: TGACGCCCTTCGGCCAGGCCACTGTGTGCCCCTTCT...CGATCGCCCCTGTGACTGTCTCTCTGCCCGGACAGGAAAGGCCTGGAGGGACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612929.2 |
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| CDS-3UTR GCA 90 bp | GGGTCCCTCCAGGCCTTTCCTGTCCGGGCAGAGAGACAGTCACAGGGGCGATCGTCTCGTGACAGTGTTTaGAAAGCGCGGAGGGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: GSLQAFPVRAERQSQGRSSRDSV*KARRAS Trigger: GGACGCCCTCCGCGCTTTGCAAACACTGTCACGAGA...CGATCGCCCCTGTGACTGTCTCTCTGCCCGGACAGGAAAGGCCTGGAGGGACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612929.2 |
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| CDS TCA 90 bp | CGTAGCCGTGGCTTAGTGCCAGGTACGCGTCCCCCGACAGCGACTTaGGCTCGGCCATGGCCGCGCCGCCTGGGCTCGGGGGCTCGCCGG | + |
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Preference number: 5 (lower is better) Translates to: RSRGLVPGTRPPTAT*ARPWPRRLGSGARR Trigger: CCGGCGAGCCCCCGAGCCCAGGCGGCGCGGCCATGGCCGAGCTCAAGTCGCTGTCGGGGGACGCGTACCTGGCACTAAGCCACGGCTACG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS TCA 90 bp | GACGCGTGCGGGAGGGCCGGGGGCCCGCGCGGTCACGGCTTCTCGTaGCAGTGTTTGCAAAGCGCGGAGGGCGTCCCGGAGAAGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: DACGRAGGPRGHGFS*QCLQSAEGVPEKAA Trigger: CGCCGCCTTCTCCGGGACGCCCTCCGCGCTTTGCAAACACTGTCACGAGAAGCCGTGACCGCGCGGGCCCCCGGCCCTCCCGCACGCGTC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CAA 90 bp | CGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGGGGCGCGTCGGTCTGGCTaGCCTGCGGGTCCCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: RAERQSQGRSEDACGRAGARRSG*PAGPRA Trigger: GGCTCTGGGACCCGCAGGCAAGCCAGACCGACGCGC...CCCGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS GCA 90 bp | GGAGAAGGCGGCGCACTTGTCAGGGCAGGGCCCCAGGGCGGCGCCTaGGGAGAAGGGGCACACAGTGGCCTGGCCGAAGGGCGTCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: GEGGALVRAGPQGGA*GEGAHSGLAEGRQG Trigger: CCCTTGACGCCCTTCGGCCAGGCCACTGTGTGCCCCTTCTCCGCAGGCGCCGCCCTGGGGCCCTGCCCTGACAAGTGCGCCGCCTTCTCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CAA 90 bp | GTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGCGCGTCGGTCTGGCTaGCCTGCGGGTCCCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: VRAERQSQGRSEDACGRAARRSG*PAGPRA Trigger: GGCTCTGGGACCCGCAGGCAAGCCAGACCGACGCGC...GGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CAA 90 bp | GGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGGGGGAGAAGGCGGCGCACTaGTCAGGGCAGGGCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GQRDSHRGDRRTRAGGPGEKAAH*SGQGPR Trigger: CCTGGGGCCCTGCCCTGACAAGTGCGCCGCCTTCTC...CCCCGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CAA 90 bp | TCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGGACGCGTGCGGGAGGGCCGTCCCCCGACAGCGACTaGAGCTCGGCCATGGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: SGQRDSHRGDRRTRAGGPSPDSD*SSAMAA Trigger: CGCGGCCATGGCCGAGCTCAAGTCGCTGTCGGGGGA...CGGCCCTCCCGCACGCGTCCTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS GCA 90 bp | GGAGGGCCGGGGGCCCGCGCGGTCACGGCTTCTCGTGACAGTGTTTaGAAAGCGCGGAGGGCGTCCCGGAGAAGGCGGCGCACTTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: GGPGARAVTASRDSV*KARRASRRRRRTCQ Trigger: CTGACAAGTGCGCCGCCTTCTCCGGGACGCCCTCCGCGCTTTGCAAACACTGTCACGAGAAGCCGTGACCGCGCGGGCCCCCGGCCCTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS-3UTR CAA 90 bp | TCCCTCCAGGCCTTTCCTGTCCGGGCAGAGAGACAGTCACAGGGGCGATCGGAGTCCCCCGACAGCGACTaGAGCTCGGCCATGGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: SLQAFPVRAERQSQGRSESPDSD*SSAMAA Trigger: CGCGGCCATGGCCGAGCTCAAGTCGCTGTCGGGGGA...CTCCGATCGCCCCTGTGACTGTCTCTCTGCCCGGACAGGAAAGGCCTGGAGGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612929.2 |
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| CDS TCA 72 bp | GGCTTAGTGCCAGGTACGCGTCCCCCGACAGCGACTTaGGCTCGGCCATGGCCGCGCCGCCTGGGCTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: GLVPGTRPPTAT*ARPWPRRLGSG Trigger: CCCCGAGCCCAGGCGGCGCGGCCATGGCCGAGCTCAAGTCGCTGTCGGGGGACGCGTACCTGGCACTAAGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS TCA 72 bp | GGGAGGGCCGGGGGCCCGCGCGGTCACGGCTTCTCGTaGCAGTGTTTGCAAAGCGCGGAGGGCGTCCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: GRAGGPRGHGFS*QCLQSAEGVPE Trigger: CTCCGGGACGCCCTCCGCGCTTTGCAAACACTGTCACGAGAAGCCGTGACCGCGCGGGCCCCCGGCCCTCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS GCA 72 bp | CGAAGGCGTCGTCCTCGTCCCCGCTCTGTTCGCCGCTaGTCTCCGCCGCCTGAGCTGGGGCGCGAGGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RRRRPRPRSVRR*SPPPELGREVQ Trigger: CTGCACCTCGCGCCCCAGCTCAGGCGGCGGAGAGCAGCGGCGAACAGAGCGGGGACGAGGACGACGCCTTCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS CAA 90 bp | CAGTGTTTGCAAAGCGCGGAGGGCGTCCCGGAGAAGGCGGCGCACTaGTCAGGGCAGGGCCCCAGGGCGGCGCCTGCGGAGAAGGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: QCLQSAEGVPEKAAH*SGQGPRAAPAEKGH Trigger: GTGCCCCTTCTCCGCAGGCGCCGCCCTGGGGCCCTGCCCTGACAAGTGCGCCGCCTTCTCCGGGACGCCCTCCGCGCTTTGCAAACACTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS GCA 72 bp | GGGGCCCGCGCGGTCACGGCTTCTCGTGACAGTGTTTaGAAAGCGCGGAGGGCGTCCCGGAGAAGGCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: GARAVTASRDSV*KARRASRRRRR Trigger: GCGCCGCCTTCTCCGGGACGCCCTCCGCGCTTTGCAAACACTGTCACGAGAAGCCGTGACCGCGCGGGCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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| CDS CAA 72 bp | TGGCTTAGTGCCAGGTACGCGTCCCCCGACAGCGACTaGAGCTCGGCCATGGCCGCGCCGCCTGGGCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: WLSARYASPDSD*SSAMAAPPGLG Trigger: CCCGAGCCCAGGCGGCGCGGCCATGGCCGAGCTCAAGTCGCTGTCGGGGGACGCGTACCTGGCACTAAGCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370346.2 ENST00000612929.2 |
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