Pregenerated sensors for BGLAP (Homo sapiens)
Ensembl gene IDs: ENSG00000242252Ensembl transcript IDs: ENST00000368272.5, ENST00000471413.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCGTGGCTGCGCTGGGCTaGTGCTCAGGACTCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASVAALG*CSGLSW Trigger: CCAGCTGAGTCCTGAGCAGCAGCCCAGCGCAGCCAC...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR GCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCTGGTGTCTCGGTGGCTaGGCTGGGCTGCTGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASWCLGG*AGLLLR Trigger: CCTGAGCAGCAGCCCAGCGCAGCCACCGAGACACCA...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR GCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCCTGCCTGGCCAGCGATaGAAAGTGCGGCCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASLPGQR*KVRPGP Trigger: TGGCCCTGGCCGCACTTTGCATCGCTGGCCAGGCAG...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR GCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCGAGCAGAACTGGGGTTaGCGGCCAGGCCAGCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASEQNWG*RPGQQS Trigger: GCTCTGCTGGCCTGGCCGGCAACCCCAGTTCTGCTC...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCTGGACTCTGCACCGCTaGGCTTCGCACCTGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASWTLHR*ASHLPG Trigger: GCCAGGCAGGTGCGAAGCCCAGCGGTGCAGAGTCCA...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCCACACACCTCCCTCCTaGGCTCCAGGGGATCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASHTPPS*APGDPG Trigger: ACCCGGATCCCCTGGAGCCCAGGAGGGAGGTGTGTG...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCGGAGAGGAGCAGAACTaGGGTTGCCGGCCAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASGEEQN*GCRPGQ Trigger: CTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCC...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR GCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCGCTGGGCTTCGCACCTaGCTGGCCAGCGATGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASAGLRT*LASDAK Trigger: CTTTGCATCGCTGGCCAGGCAGGTGCGAAGCCCAGC...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCTCTCGGTGGCTGCGCTaGGCTGCTGCTCAGGACTCA | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASSRWLR*AAAQDS Trigger: TGAGTCCTGAGCAGCAGCCCAGCGCAGCCACCGAGA...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCCTCATGGTGTCTCGGTaGCTGCGCTGGGCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASLMVSR*LRWAAA Trigger: AGCAGCAGCCCAGCGCAGCCACCGAGACACCATGAG...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCGGCTTCGCACCTGCCTaGCCAGCGATGCAAAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASGFAPA*PAMQSA Trigger: CGCACTTTGCATCGCTGGCCAGGCAGGTGCGAAGCC...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR TCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCTGGGAGCAGCTGGGATaGTGGGGACCCCACATCCAT | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASWEQLG*WGPHIH Trigger: ATGGATGTGGGGTCCCCATCATCCCAGCTGCTCCCA...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR GCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCACCTTTGCTGGACTCTaGACCGCTGGGCTTCGCACC | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASTFAGL*TAGLRT Trigger: GGTGCGAAGCCCAGCGGTGCAGAGTCCAGCAAAGGT...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCAGGCTGCACCTTTGCTaGACTCTGCACCGCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASRLHLC*TLHRWA Trigger: AGCCCAGCGGTGCAGAGTCCAGCAAAGGTGCAGCCT...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR TCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCATAGGGCGAGGAGTGTaGGGGCTCTCATGGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASIGRGV*GLSWCL Trigger: GAGACACCATGAGAGCCCTCACACTCCTCGCCCTAT...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR GCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCCAAAGGCTGCACCTTTaGTGGACTCTGCACCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASQRLHL*WTLHRW Trigger: CCAGCGGTGCAGAGTCCAGCAAAGGTGCAGCCTTTG...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCCGCTGCCCTCCTGCTTaGACACAAAGGCTGCACCTT | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASRCPPA*TQRLHL Trigger: AAGGTGCAGCCTTTGTGTCCAAGCAGGAGGGCAGCG...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCATCCGGGTAGGGGACTaGGGCTCCCAGCCATTGATA | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASIRVGD*GSQPLI Trigger: TATCAATGGCTGGGAGCCCCAGTCCCCTACCCGGAT...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCGGAAAGAAGGGTGCCTaGAGAGGAGCAGAACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASGKKGA*RGAELG Trigger: CCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCC...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR GCA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCTCTTCACTACCTCGCTaGCCTCCTGCTTGGACACAA | + |
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Preference number: 4 (lower is better) Translates to: RKEGCLERSRTGVAGQASSSLPR*PPAWTQ Trigger: TTGTGTCCAAGCAGGAGGGCAGCGAGGTAGTGAAGA...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS TCA 90 bp | GGCCAGCGATGCAAAGTGCGGCCAGGGCCAATAGGGCGAGGAGTGTaGGGGCTCTCATGGTGTCTCGGTGGCTGCGCTGGGCTGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: GQRCKVRPGPIGRGV*GLSWCLGGCAGLLL Trigger: GAGCAGCAGCCCAGCGCAGCCACCGAGACACCATGAGAGCCCTCACACTCCTCGCCCTATTGGCCCTGGCCGCACTTTGCATCGCTGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368272.5 ENST00000471413.1 |
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| CDS CCA 90 bp | GGGCAAGGGGAAGAGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTaGGGTTGCCGGCCAGGCCAGCAGAGCGACACCCTAGACCGGGCC | + |
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Preference number: 5 (lower is better) Translates to: GQGEEERRVPGEEQN*GCRPGQQSDTLDRA Trigger: GGCCCGGTCTAGGGTGTCGCTCTGCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCTCTTCCCCTTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368272.5 ENST00000471413.1 |
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| CDS-3UTR CAA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCTGGGGCTCCCAGCCATaGATACAGGTAGCGCCTGGG | + |
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Preference number: 5 (lower is better) Translates to: RKEGCLERSRTGVAGQASWGSQP*IQVAPG Trigger: CCCAGGCGCTACCTGTATCAATGGCTGGGAGCCCCA...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CAA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCTCGCTGCCCTCCTGCTaGGACACAAAGGCTGCACCT | + |
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Preference number: 5 (lower is better) Translates to: RKEGCLERSRTGVAGQASSLPSC*DTKAAP Trigger: AGGTGCAGCCTTTGTGTCCAAGCAGGAGGGCAGCGA...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS CCA 90 bp | CCGGGTAGGGGACTGGGGCTCCCAGCCATTGATACAGGTAGCGCCTaGGTCTCTTCACTACCTCGCTGCCCTCCTGCTTGGACACAAAGG | + |
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Preference number: 5 (lower is better) Translates to: PGRGLGLPAIDTGSA*VSSLPRCPPAWTQR Trigger: CCTTTGTGTCCAAGCAGGAGGGCAGCGAGGTAGTGAAGAGACCCAGGCGCTACCTGTATCAATGGCTGGGAGCCCCAGTCCCCTACCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CAA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCACAAAGGCTGCACCTTaGCTGGACTCTGCACCGCTG | + |
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Preference number: 5 (lower is better) Translates to: RKEGCLERSRTGVAGQASTKAAP*LDSAPL Trigger: CAGCGGTGCAGAGTCCAGCAAAGGTGCAGCCTTTGT...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS-3UTR CAA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCTCGTCACAGTCCGGATaGAGCTCACACACCTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: RKEGCLERSRTGVAGQASSSQSG*SSHTSL Trigger: GAGGGAGGTGTGTGAGCTCAATCCGGACTGTGACGA...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS CCA 90 bp | CCTGCTTGGACACAAAGGCTGCACCTTTGCTGGACTCTGCACCGCTaGGCTTCGCACCTGCAAAGGAAAGGGAGCCTGGTTCACCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PAWTQRLHLCWTLHR*ASHLQRKGSLVHPS Trigger: GCTGGGGTGAACCAGGCTCCCTTTCCTTTGCAGGTGCGAAGCCCAGCGGTGCAGAGTCCAGCAAAGGTGCAGCCTTTGTGTCCAAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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| CDS GCA 90 bp | CCAGCCATTGATACAGGTAGCGCCTGGGTCTCTTCACTACCTCGCTaGCCTCCTGCTTGGACACAAAGGCTGCACCTTTGCTGGACTCTG | + |
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Preference number: 5 (lower is better) Translates to: PAIDTGSAWVSSLPR*PPAWTQRLHLCWTL Trigger: CAGAGTCCAGCAAAGGTGCAGCCTTTGTGTCCAAGCAGGAGGGCAGCGAGGTAGTGAAGAGACCCAGGCGCTACCTGTATCAATGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368272.5 ENST00000471413.1 |
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| CDS-3UTR CAA 90 bp | AGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTTGCCGGCCAGGCCAGCTCTTCTGGAGTTTATTaGGGAGCAGCTGGGATGATG | + |
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Preference number: 5 (lower is better) Translates to: RKEGCLERSRTGVAGQASSSGVY*GAAGMM Trigger: CATCATCCCAGCTGCTCCCAAATAAACTCCAGAAGA...GCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS GCA 90 bp | CAGAGCTGGGGCAAATGGATTGAGCCTGCAACAAGGTGGTTAGACTaGAAAGGGACTGCCAGCCAAAGGGGTGAGAAGAGGTGGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: QSWGKWIEPATRWLD*KGTASQRGEKRWAM Trigger: CATGGCCCACCTCTTCTCACCCCTTTGGCTGGCAGTCCCTTTGCAGTCTAACCACCTTGTTGCAGGCTCAATCCATTTGCCCCAGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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| CDS CCA 90 bp | AGCTCTGCCTTTTCTCTCACCCCAGCCATTGATACAGGTAGCGCCTaGGTCTCTTCACTACCTCGCTGCCCTCCTGCTTGGACACAAAGG | + |
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Preference number: 5 (lower is better) Translates to: SSAFSLTPAIDTGSA*VSSLPRCPPAWTQR Trigger: CCTTTGTGTCCAAGCAGGAGGGCAGCGAGGTAGTGAAGAGACCCAGGCGCTACCTGTATCAATGGCTGGGGTGAGAGAAAAGGCAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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| CDS GCA 72 bp | CCTGTACCCCCACCACAACCCAGAGAGGCCACTCCCTaGTGCAGCTCCCCCACAGACCATCCCGGAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: PVPPPQPREATP*CSSPTDHPGEA Trigger: TGCCTCTCCGGGATGGTCTGTGGGGGAGCTGCAGCAGGGAGTGGCCTCTCTGGGTTGTGGTGGGGGTACAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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| CDS GCA 72 bp | TACACATGGGGCTCCAGGGTGCCCACCAGGGCAGGCTaGCTGTACCCCCACCACAACCCAGAGAGGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: YTWGSRVPTRAG*LYPHHNPERPL Trigger: GAGTGGCCTCTCTGGGTTGTGGTGGGGGTACAGGCAGCCTGCCCTGGTGGGCACCCTGGAGCCCCATGTGTA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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| CDS CCA 72 bp | AGGGCGAGGAGTGTGAGGGCTCTCATGGTGTCTCGGTaGCTGCGCTGGGCTGCTGCTCAGGACTCAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RARSVRALMVSR*LRWAAAQDSAG Trigger: GCCAGCTGAGTCCTGAGCAGCAGCCCAGCGCAGCCACCGAGACACCATGAGAGCCCTCACACTCCTCGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS TCA 72 bp | TGCAAAGTGCGGCCAGGGCCAATAGGGCGAGGAGTGTaGGGGCTCTCATGGTGTCTCGGTGGCTGCGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CKVRPGPIGRGV*GLSWCLGGCAG Trigger: CCCAGCGCAGCCACCGAGACACCATGAGAGCCCTCACACTCCTCGCCCTATTGGCCCTGGCCGCACTTTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000368272.5 ENST00000471413.1 |
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| CDS CAA 90 bp | AGGGGAAGAGGAAAGAAGGGTGCCTGGAGAGGAGCAGAACTGGGGTaGCCGGCCAGGCCAGCAGAGCGACACCCTAGACCGGGCCGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RGRGKKGAWRGAELG*PARPAERHPRPGRR Trigger: TCTACGGCCCGGTCTAGGGTGTCGCTCTGCTGGCCTGGCCGGCAACCCCAGTTCTGCTCCTCTCCAGGCACCCTTCTTTCCTCTTCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368272.5 ENST00000471413.1 |
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| CDS GCA 72 bp | CTGCCAGCCAAAGGGGTGAGAAGAGGTGGGCCATGGTaGTTCCTCCTCTCAGCCCCCACTGCAATGCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LPAKGVRRGGPW*FLLSAPTAMRP Trigger: AGGCCGCATTGCAGTGGGGGCTGAGAGGAGGAAGCACCATGGCCCACCTCTTCTCACCCCTTTGGCTGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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| CDS GCA 72 bp | CTGCTTGGACACAAAGGCTGCACCTTTGCTGGACTCTaGACCGCTGGGCTTCGCACCTGCCTGGCCAGCGAT | + |
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Preference number: 6 (lower is better) Translates to: LLGHKGCTFAGL*TAGLRTCLASD Trigger: ATCGCTGGCCAGGCAGGTGCGAAGCCCAGCGGTGCAGAGTCCAGCAAAGGTGCAGCCTTTGTGTCCAAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS GCA 72 bp | GCTCTGAGACACCCGACGTGGTGGCATCAGCCCCCGTaGAAAATGCCCATCCCTCCTCTCCCTACACATGGG | + |
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Preference number: 6 (lower is better) Translates to: ALRHPTWWHQPP*KMPIPPLPTHG Trigger: CCCATGTGTAGGGAGAGGAGGGATGGGCATTTTGCACGGGGGCTGATGCCACCACGTCGGGTGTCTCAGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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| CDS CCA 72 bp | GGACTGGGGCTCCCAGCCATTGATACAGGTAGCGCCTaGGTCTCTTCACTACCTCGCTGCCCTCCTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GLGLPAIDTGSA*VSSLPRCPPAW Trigger: CCAAGCAGGAGGGCAGCGAGGTAGTGAAGAGACCCAGGCGCTACCTGTATCAATGGCTGGGAGCCCCAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368272.5 |
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| CDS CCA 72 bp | TGCAAAGGGACTGCCAGCCAAAGGGGTGAGAAGAGGTaGGCCATGGTGCTTCCTCCTCTCAGCCCCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: CKGTASQRGEKR*AMVLPPLSPHC Trigger: GCAGTGGGGGCTGAGAGGAGGAAGCACCATGGCCCACCTCTTCTCACCCCTTTGGCTGGCAGTCCCTTTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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| CDS CCA 72 bp | GCCTGGGTCTCTTCACTACCTCGCTGCCCTCCTGCTTaGACACAAAGGCTGCACCTTTGCTGGACTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: AWVSSLPRCPPA*TQRLHLCWTLH Trigger: GTGCAGAGTCCAGCAAAGGTGCAGCCTTTGTGTCCAAGCAGGAGGGCAGCGAGGTAGTGAAGAGACCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368272.5 ENST00000471413.1 |
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| CDS GCA 72 bp | GATACAGGTAGCGCCTGGGTCTCTTCACTACCTCGCTaGCCTCCTGCTTGGACACAAAGGCTGCACCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: DTGSAWVSSLPR*PPAWTQRLHLC Trigger: GCAAAGGTGCAGCCTTTGTGTCCAAGCAGGAGGGCAGCGAGGTAGTGAAGAGACCCAGGCGCTACCTGTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000368272.5 ENST00000471413.1 |
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| CDS GCA 72 bp | CTGCTTGGACACAAAGGCTGCACCTTTGCTGGACTCTaGACCGCTGGGCTTCGCACCTGCAAAGGAAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LLGHKGCTFAGL*TAGLRTCKGKG Trigger: TCCCTTTCCTTTGCAGGTGCGAAGCCCAGCGGTGCAGAGTCCAGCAAAGGTGCAGCCTTTGTGTCCAAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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| CDS CCA 72 bp | ACACAAAGGCTGCACCTTTGCTGGACTCTGCACCGCTaGGCTTCGCACCTGCAAAGGAAAGGGAGCCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: TQRLHLCWTLHR*ASHLQRKGSLV Trigger: AACCAGGCTCCCTTTCCTTTGCAGGTGCGAAGCCCAGCGGTGCAGAGTCCAGCAAAGGTGCAGCCTTTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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| CDS CCA 72 bp | TTTTCTCTCACCCCAGCCATTGATACAGGTAGCGCCTaGGTCTCTTCACTACCTCGCTGCCCTCCTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: FSLTPAIDTGSA*VSSLPRCPPAW Trigger: CCAAGCAGGAGGGCAGCGAGGTAGTGAAGAGACCCAGGCGCTACCTGTATCAATGGCTGGGGTGAGAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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| CDS CCA 72 bp | CAGAGCTGGGGCAAATGGATTGAGCCTGCAACAAGGTaGTTAGACTGCAAAGGGACTGCCAGCCAAAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: QSWGKWIEPATR*LDCKGTASQRG Trigger: ACCCCTTTGGCTGGCAGTCCCTTTGCAGTCTAACCACCTTGTTGCAGGCTCAATCCATTTGCCCCAGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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| CDS GCA 72 bp | GGCAAATGGATTGAGCCTGCAACAAGGTGGTTAGACTaGAAAGGGACTGCCAGCCAAAGGGGTGAGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GKWIEPATRWLD*KGTASQRGEKR Trigger: CCTCTTCTCACCCCTTTGGCTGGCAGTCCCTTTGCAGTCTAACCACCTTGTTGCAGGCTCAATCCATTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471413.1 |
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