RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BFSP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000125864

Ensembl transcript IDs: ENST00000377868.6, ENST00000377873.8, ENST00000473415.1, ENST00000536626.7

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACACGGTTGCTCTCGACTTaGCGGGCGAGGGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTRLLST*RARASS
Trigger: CGAGGACGCCCTCGCCCGCCAAGTCGAGAGCAACCG...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR TCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACACCTCTGCACCGGGTGTaGCCATGGCACAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTPLHRV*PWHRVS
Trigger: GGAGACCCTGTGCCATGGTCACACCCGGTGCAGAGG...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTCTGCGCCTGCAGGTaGGAGAGCACCTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGLCACR*ESTSRP
Trigger: GGGCCGGGAGGTGCTCTCCCACCTGCAGGCGCAGAG...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTACTCTGCGCCTGCAGGTaGGAGAGCACCTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLLCACR*ESTSRP
Trigger: GGGCCGGGAGGTGCTCTCCCACCTGCAGGCGCAGAG...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATACGCCGCCAGGCTCGTTaGCCCAGCCCAGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIRRQAR*PSPALV
Trigger: GACGAGGGCTGGGCTGGGGCAACGAGCCTGGCGGCG...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR GCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCCGCTCGCCGAGCCCCTaGAGCGCCGCCAGGCTCGTT +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSRSPSP*SAARLV
Trigger: AACGAGCCTGGCGGCGCTGCAGGGGCTCGGCGAGCG...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR TCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCCTCTGCACCGGGTGTaGCCATGGCACAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGPLHRV*PWHRVS
Trigger: GGAGACCCTGTGCCATGGTCACACCCGGTGCAGAGG...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCAGCTGCGCCGGTACATaGCTGCTCTGGCGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSSCAGT*LLWRGR
Trigger: GCGCCCGCGCCAGAGCAGCCATGTACCGGCGCAGCT...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR CCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCCTCTGCGCCTGCAGGTaGGAGAGCACCTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSLCACR*ESTSRP
Trigger: GGGCCGGGAGGTGCTCTCCCACCTGCAGGCGCAGAG...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACATGGCACAGGGTCTCCTaGACTCTTCGTCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTWHRVS*TLRPAP
Trigger: AGGAGCGGGACGAAGAGTCCAGGAGACCCTGTGCCA...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACAAGCTACTTGAGAGGCTaGGGCGGGAGGATCACTGGA +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTSYLRG*GGRITG
Trigger: TCCAGTGATCCTCCCGCCTCAGCCTCTCAAGTAGCT...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536626.7
CDS-3UTR GCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAGAAGCCTCGTCGGCGTaGTCGTACTGCTCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALEASSA*SYCSLR
Trigger: CCGCAAGGAGCAGTACGAGCACGCCGACGAGGCTTC...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR GCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAATGGAAGGCATCCAGCTaGCTCCGGAGCCCGGCATGG +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKWKASS*LRSPAW
Trigger: CCATGCCGGGCTCCGGAGGCAGCTGGATGCCTTCCA...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR GCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCAGGTGTGCTGCCTGCTaGCTGAGGTACCCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVRCAAC*LRYPAY
Trigger: GTAGGCAGGGTACCTCAGGCAGCAGGCAGCACACCT...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR CCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAAGCTCGCCCAGGCGCTaGAAGGCATCCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKSSPRR*KASSCL
Trigger: GAGGCAGCTGGATGCCTTCCAGCGCCTGGGCGAGCT...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR CCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACATATCTGCCCTCCATCTaGCACATCCTCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTYLPSI*HILWSP
Trigger: GGGGCTCCAGAGGATGTGCCAGATGGAGGGCAGATA...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCGCACGTGCCGCTCTTTaGTGTAGAGCTCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVARAAL*CRAQWG
Trigger: CCCCCACTGAGCTCTACACCAAAGAGCGGCACGTGC...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACACACTGGCTCAAGGGGTaGGAGGGAAGGCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTHWLKG*EGRLST
Trigger: TGTGGAAAGCCTTCCCTCCCACCCCTTGAGCCAGTG...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377868.6
CDS-3UTR TCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCCACCGGATCCAGTGCTaGGAGAGACTCCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVHRIQC*ERLHGS
Trigger: AGAGCCATGGAGTCTCTCTCAGCACTGGATCCGGTG...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGGGACGCGCTGGCGGTTaGTCTCGACTTGGCGGGCGA +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKGRAGG*SRLGGR
Trigger: TCGCCCGCCAAGTCGAGAGCAACCGCCAGCGCGTCC...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR GCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACACTCACATCCAAGGTGTaGTGCCTGCTGCCTGAGGTA +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTLTSKV*CLLPEV
Trigger: TACCTCAGGCAGCAGGCAGCACACCTTGGATGTGAG...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR CCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTATCTGCCCTCCATCTaGCACATCCTCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVYLPSI*HILWSP
Trigger: GGGGCTCCAGAGGATGTGCCAGATGGAGGGCAGATA...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACATGGTGTAGAGCTCAGTaGGGGTCTCAGGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTWCRAQ*GSQALW
Trigger: CCAAAGAGCCTGAGACCCCCACTGAGCTCTACACCA...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTATGGCACAGGGTCTCCTaGACTCTTCGTCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALWHRVS*TLRPAP
Trigger: AGGAGCGGGACGAAGAGTCCAGGAGACCCTGTGCCA...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAGGCGGGAGGATCACTaGAGACCGGGAGTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALRREDH*RPGVQG
Trigger: GCCTTGAACTCCCGGTCTCCAGTGATCCTCCCGCCT...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536626.7
CDS-3UTR TCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCCTCTGCACCGGGTGTaGCCATGGCACAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKPLHRV*PWHRVS
Trigger: GGAGACCCTGTGCCATGGTCACACCCGGTGCAGAGG...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTACCTCAGCTCCATCCTaGTCAGCCGCAGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGTSAPS*SAAGFG
Trigger: TCCAAAGCCTGCGGCTGATCAGGATGGAGCTGAGGT...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAACCTCAGCTCCATCCTaGTCAGCCGCAGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALTSAPS*SAAGFG
Trigger: TCCAAAGCCTGCGGCTGATCAGGATGGAGCTGAGGT...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCGGGCCAGGTCTGGGCTaGGAAAGAAAGGAGGCTTTA +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVGPGLG*ERKEAL
Trigger: TAAAGCCTCCTTTCTTTCTCAGCCCAGACCTGGCCC...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377868.6
CDS-3UTR GCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTATCTGGAAGACGTAGCTaGGCCGGTACATGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALSGRRS*AGTWLL
Trigger: GAGCAGCCATGTACCGGCGCAGCTACGTCTTCCAGA...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR GCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAGTTGTTGTCTGTGCCTaGAGCTCCACTCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALVVVCA*SSTLCA
Trigger: GGCGCAGAGAGTGGAGCTGCAGGCACAGACAACAAC...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTGTTGTTGTCTGTGCCTaGAGCTCCACTCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGVVVCA*SSTLCA
Trigger: GGCGCAGAGAGTGGAGCTGCAGGCACAGACAACAAC...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTTCATTCTTCAGGGTTTaGTGGGCGACCGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGSFFRV*WATASC
Trigger: GCAGCTGGCGGTCGCCCAGCAAACCCTGAAGAATGA...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTTCCTGCAGACCCACCTaGCCATTCTCTAAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGSCRPT*PFSKGG
Trigger: GCCCCCTTTAGAGAATGGGCAGGTGGGTCTGCAGGA...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCAGGGCCTTCCAGCTCTaGACCATCTGGCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVRAFQL*TIWLNL
Trigger: GAGATTGAGCCAGATGGTGCAGAGCTGGAAGGCCCT...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATACCAAGGTGTGCTGCCTaGTGCCTGAGGTACCCTGCC +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIPRCAA*CLRYPA
Trigger: GGCAGGGTACCTCAGGCAGCAGGCAGCACACCTTGG...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR GCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCCCAAGGTGTGCTGCCTaGTGCCTGAGGTACCCTGCC +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSPRCAA*CLRYPA
Trigger: GGCAGGGTACCTCAGGCAGCAGGCAGCACACCTTGG...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR CCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATAGGTCCCGGACGCGCTaGCGGTTGCTCTCGACTTGG +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYRSRTR*RLLSTW
Trigger: CCAAGTCGAGAGCAACCGCCAGCGCGTCCGGGACCT...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR CCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCTTCTTCAGGGTTTGCTaGGCGACCGCCAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSFFRVC*ATASCR
Trigger: CCGGCAGCTGGCGGTCGCCCAGCAAACCCTGAAGAA...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCCTGAGAGAGACTCCATaGCTCTGGGTGAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVLRETP*LWVNRG
Trigger: TCCCCTGTTCACCCAGAGCCATGGAGTCTCTCTCAG...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACAATCTGGCACATCCTCTaGAGCCCCTTCTTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTIWHIL*SPFLCQ
Trigger: CTGACACAAGAAGGGGCTCCAGAGGATGTGCCAGAT...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTTATCTGCCCTCCATCTaGCACATCCTCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGYLPSI*HILWSP
Trigger: GGGGCTCCAGAGGATGTGCCAGATGGAGGGCAGATA...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAGAGGAAGTGACTCACTaGCTCAAGGGGTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALEEVTH*LKGWEG
Trigger: TCCCTCCCACCCCTTGAGCCAGTGAGTCACTTCCTC...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377868.6
CDS-3UTR TCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAAATTGGCATCCCCTGTaGCCAGCACGTGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKNWHPL*PARAAL
Trigger: AAGAGCGGCACGTGCTGGTCACAGGGGATGCCAATT...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAGCTCGTACTGCTCCTTaGGGGTCTGGAAGACGTAGC +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKARTAP*GSGRRS
Trigger: GCTACGTCTTCCAGACCCGCAAGGAGCAGTACGAGC...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR GCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAACATCCAAGGTGTGCTaGCTGCTGCCTGAGGTACCC +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKTSKVC*LLPEVP
Trigger: GGGTACCTCAGGCAGCAGGCAGCACACCTTGGATGT...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR CCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTGCTGGAGGAGTGGTGTaGATGATCTGCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGAGGVV*MICCRM
Trigger: CATCCTGCAGCAGATCATCCACACCACTCCTCCAGC...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACACGTCACAATGGATGCTaGAGGAGTGGTGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTRHNGC*RSGVDD
Trigger: ATCATCCACACCACTCCTCCAGCATCCATTGTGACG...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATTTCTTCAGGGTTTGCTaGGCGACCGCCAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYFFRVC*ATASCR
Trigger: CCGGCAGCTGGCGGTCGCCCAGCAAACCCTGAAGAA...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAGAGACTCCATGGCTCTaGGTGAACAGGGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALETPWL*VNRGMG
Trigger: TCCCATTCCCCTGTTCACCCAGAGCCATGGAGTCTC...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTGAGACTCCATGGCTCTaGGTGAACAGGGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGETPWL*VNRGMG
Trigger: TCCCATTCCCCTGTTCACCCAGAGCCATGGAGTCTC...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTGAGAGAGACTCCATaGCTCTGGGTGAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGLRETP*LWVNRG
Trigger: TCCCCTGTTCACCCAGAGCCATGGAGTCTCTCTCAG...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTACTGAGAGAGACTCCATaGCTCTGGGTGAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLLRETP*LWVNRG
Trigger: TCCCCTGTTCACCCAGAGCCATGGAGTCTCTCTCAG...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATAGCACGTGCCGCTCTTTaGTGTAGAGCTCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIARAAL*CRAQWG
Trigger: CCCCCACTGAGCTCTACACCAAAGAGCGGCACGTGC...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACATATAGGCCAAAGCCTTaGGAGGGCCTTTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTYRPKP*EGLFLA
Trigger: TGCCAGAAAAAGGCCCTCCCAAGGCTTTGGCCTATA...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAATTGGGCTTCCAGCTaGAGGCGTAGGTTATGCAGC +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALNWASS*RRRLCS
Trigger: GCTGCATAACCTACGCCTTCAGCTGGAAGCCCAATT...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACATCTGCTGCAGGATGCTaGTATAGGTCTGAACTTCCA +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTSAAGC*YRSELP
Trigger: TGGAAGTTCAGACCTATATCAGCATCCTGCAGCAGA...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATACACCGGATCCAGTGCTaGGAGAGACTCCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIHRIQC*ERLHGS
Trigger: AGAGCCATGGAGTCTCTCTCAGCACTGGATCCGGTG...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATAAATTGGCATCCCCTGTaGCCAGCACGTGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKINWHPL*PARAAL
Trigger: AAGAGCGGCACGTGCTGGTCACAGGGGATGCCAATT...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTCGGCGTGCTCGTACTaGTCCTTGCGGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKSACSY*SLRVWK
Trigger: CTTCCAGACCCGCAAGGAGCAGTACGAGCACGCCGA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR GCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACACTTGTGCCTGTCCTTTaGCGCACTGATATCATCTTG +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTLVPVL*RTDIIL
Trigger: CAAGATGATATCAGTGCGGCAAAGGACAGGCACAAG...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCAGAGTTGTTGTCTGTaGCTGCAGCTCCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGQSCCL*LQLHSL
Trigger: CAGAGAGTGGAGCTGCAGGCACAGACAACAACTCTG...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTACAGAGTTGTTGTCTGTaGCTGCAGCTCCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALQSCCL*LQLHSL
Trigger: CAGAGAGTGGAGCTGCAGGCACAGACAACAACTCTG...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCATTCTTCAGGGTTTaGTGGGCGACCGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKISFFRV*WATASC
Trigger: GCAGCTGGCGGTCGCCCAGCAAACCCTGAAGAATGA...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCTCATTCTTCAGGGTTTaGTGGGCGACCGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSSFFRV*WATASC
Trigger: GCAGCTGGCGGTCGCCCAGCAAACCCTGAAGAATGA...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTATATAGATGGTTCCTCTaGACCGGGTGTGACCATGGC +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALYRWFL*TGCDHG
Trigger: GCCATGGTCACACCCGGTGCAGAGGAACCATCTATA...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGAGGTGTGCTGCCTGCTaGCTGAGGTACCCTGCCTAC +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKRCAAC*LRYPAY
Trigger: GTAGGCAGGGTACCTCAGGCAGCAGGCAGCACACCT...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR GCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCACATCCAAGGTGTGCTaGCTGCTGCCTGAGGTACCC +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSTSKVC*LLPEVP
Trigger: GGGTACCTCAGGCAGCAGGCAGCACACCTTGGATGT...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR CCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAATGGTGTAGAGCTCAGTaGGGGTCTCAGGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKWCRAQ*GSQALW
Trigger: CCAAAGAGCCTGAGACCCCCACTGAGCTCTACACCA...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACACAGCTCTGCACCATCTaGCTCAATCTCCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTQLCTI*LNLLVY
Trigger: ATAGACAAGGAGATTGAGCCAGATGGTGCAGAGCTG...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTGGCACAGGGTCTCCTaGACTCTTCGTCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKWHRVS*TLRPAP
Trigger: AGGAGCGGGACGAAGAGTCCAGGAGACCCTGTGCCA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAGGCTCAGGTATAGATaGTTCCTCTGCACCGGGTGT +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALRLRYR*FLCTGC
Trigger: ACACCCGGTGCAGAGGAACCATCTATACCTGAGCCT...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTATCAGCCGCAGGCTTTaGAGGCTCAGGTATAGATGG +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGISRRL*RLRYRW
Trigger: CCATCTATACCTGAGCCTCCAAAGCCTGCGGCTGAT...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCAGCCGCAGGCTTTaGAGGCTCAGGTATAGATGG +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLISRRL*RLRYRW
Trigger: CCATCTATACCTGAGCCTCCAAAGCCTGCGGCTGAT...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAAATTGGGCTTCCAGCTaGAGGCGTAGGTTATGCAGC +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKNWASS*RRRLCS
Trigger: GCTGCATAACCTACGCCTTCAGCTGGAAGCCCAATT...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTGAATGGGAGTTTCAATaGAGGCAGAGGTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGEWEFQ*RQRSAC
Trigger: ACAGGCTGACCTCTGCCTTCATTGAAACTCCCATTC...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCACCGGATCCAGTGCTaGGAGAGACTCCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYHRIQC*ERLHGS
Trigger: AGAGCCATGGAGTCTCTCTCAGCACTGGATCCGGTG...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATAATTGGCATCCCCTGTaGCCAGCACGTGCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYNWHPL*PARAAL
Trigger: AAGAGCGGCACGTGCTGGTCACAGGGGATGCCAATT...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATACCTCAGCTCCATCCTaGTCAGCCGCAGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYTSAPS*SAAGFG
Trigger: TCCAAAGCCTGCGGCTGATCAGGATGGAGCTGAGGT...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCCTTGTGCCTGTCCTTTaGCGCACTGATATCATCTTG +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVLVPVL*RTDIIL
Trigger: CAAGATGATATCAGTGCGGCAAAGGACAGGCACAAG...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCAGAAGATTCTTCTTGTaGCTGTCCTTTGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVRRFFL*LSFAAL
Trigger: CAGTGCGGCAAAGGACAGGCACAAGAAGAATCTTCT...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAACTCGTCACAATGGATaGTGGAGGAGTGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLTRHNG*WRSGVD
Trigger: ATCCACACCACTCCTCCAGCATCCATTGTGACGAGT...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATGTTGTTGTCTGTGCCTaGAGCTCCACTCTCTGCGCC +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYVVVCA*SSTLCA
Trigger: GGCGCAGAGAGTGGAGCTGCAGGCACAGACAACAAC...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAAAGCCTTTGCTTATCTaGCCTCCATCTGGCACATCC +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLKPLLI*PPSGTS
Trigger: GGATGTGCCAGATGGAGGGCAGATAAGCAAAGGCTT...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATTCCTGCAGACCCACCTaGCCATTCTCTAAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYSCRPT*PFSKGG
Trigger: GCCCCCTTTAGAGAATGGGCAGGTGGGTCTGCAGGA...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTCCTGCAGACCCACCTaGCCATTCTCTAAAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKSCRPT*PFSKGG
Trigger: GCCCCCTTTAGAGAATGGGCAGGTGGGTCTGCAGGA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACATCCTTGTCTATAGGCTaGTGGTCAATTGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTSLSIG*WSIGCP
Trigger: TGGACAACCAATTGACCAGCAGCCTATAGACAAGGA...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAAGGCTTCGTTGGCAATaGCAGATGGGTCAACTATGG +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLRLRWQ*QMGQLW
Trigger: CCATAGTTGACCCATCTGGCATTGCCAACGAAGCCT...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTACGTCACAATGGATGCTaGAGGAGTGGTGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALRHNGC*RSGVDD
Trigger: ATCATCCACACCACTCCTCCAGCATCCATTGTGACG...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCGAGACTCCATGGCTCTaGGTGAACAGGGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSETPWL*VNRGMG
Trigger: TCCCATTCCCCTGTTCACCCAGAGCCATGGAGTCTC...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTTATAGGCCAAAGCCTTaGGAGGGCCTTTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGYRPKP*EGLFLA
Trigger: TGCCAGAAAAAGGCCCTCCCAAGGCTTTGGCCTATA...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTTGTCTTTCCAATCATaGTCTCCACGATCACAGCGG +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVLSFQS*SPRSQR
Trigger: CCGCTGTGATCGTGGAGACCATGATTGGAAAGACAA...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTATCTGCTGCAGGATGCTaGTATAGGTCTGAACTTCCA +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLSAAGC*YRSELP
Trigger: TGGAAGTTCAGACCTATATCAGCATCCTGCAGCAGA...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCTCGATGATACGATaGTACCGGTCCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLISMIR*YRSSSF
Trigger: GAATGAGCTGGACCGGTATCATCGTATCATCGAGAT...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTATCTCGATGATACGATaGTACCGGTCCAGCTCATTC +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGISMIR*YRSSSF
Trigger: GAATGAGCTGGACCGGTATCATCGTATCATCGAGAT...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTATGCCTTCAATCTCGATaGTACGATGATACCGGTCCA +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLCLQSR*YDDTGP
Trigger: TGGACCGGTATCATCGTATCATCGAGATTGAAGGCA...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCGCACTGATATCATCTTaGAGAAATTGGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVALISS*RNWASS
Trigger: GCTGGAAGCCCAATTTCTGCAAGATGATATCAGTGC...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAAGAAGATTCTTCTTGTaGCTGTCCTTTGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLRRFFL*LSFAAL
Trigger: CAGTGCGGCAAAGGACAGGCACAAGAAGAATCTTCT...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAACTCGTCACAATGGATaGTGGAGGAGTGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKTRHNG*WRSGVD
Trigger: ATCCACACCACTCCTCCAGCATCCATTGTGACGAGT...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAAAGCCTTTGCTTATCTaGCCTCCATCTGGCACATCC +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKKPLLI*PPSGTS
Trigger: GGATGTGCCAGATGGAGGGCAGATAAGCAAAGGCTT...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGAGGGCCTTCCAGCTCTaGACCATCTGGCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKRAFQL*TIWLNL
Trigger: GAGATTGAGCCAGATGGTGCAGAGCTGGAAGGCCCT...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATAGGGCCTTCCAGCTCTaGACCATCTGGCTCAATCTC +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYRAFQL*TIWLNL
Trigger: GAGATTGAGCCAGATGGTGCAGAGCTGGAAGGCCCT...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAAGGCTTCGTTGGCAATaGCAGATGGGTCAACTATGG +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKRLRWQ*QMGQLW
Trigger: CCATAGTTGACCCATCTGGCATTGCCAACGAAGCCT...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCTGCCTGAGGTACCCTaGCTACCCAGGACTCCAAAA +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYLPEVP*LPRTPK
Trigger: TTTTGGAGTCCTGGGTAGGCAGGGTACCTCAGGCAG...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR GCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCTGCCTGAGGTACCCTaGCTACCCAGGACTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKLPEVP*LPRTPK
Trigger: TTTTGGAGTCCTGGGTAGGCAGGGTACCTCAGGCAG...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR CCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAACGTCACAATGGATGCTaGAGGAGTGGTGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKRHNGC*RSGVDD
Trigger: ATCATCCACACCACTCCTCCAGCATCCATTGTGACG...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCCCACTCGTCACAATaGATGCTGGAGGAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKISHSSQ*MLEEWC
Trigger: ACACCACTCCTCCAGCATCCATTGTGACGAGTGGGA...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTCCTTGGAACATTCTTaGGGAGGGCTTTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVSLEHS*GGLFVL
Trigger: CAAGACAAAAAGCCCTCCCCAAGAATGTTCCAAGGA...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCATCTGGCACATCCTCTaGAGCCCCTTCTTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSIWHIL*SPFLCQ
Trigger: CTGACACAAGAAGGGGCTCCAGAGGATGTGCCAGAT...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTGGTGTAGAGCTCAGTaGGGGTCTCAGGCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKWCRAQ*GSQALW
Trigger: CCAAAGAGCCTGAGACCCCCACTGAGCTCTACACCA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTACAGCTCTGCACCATCTaGCTCAATCTCCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLQLCTI*LNLLVY
Trigger: ATAGACAAGGAGATTGAGCCAGATGGTGCAGAGCTG...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATAATCAGCCGCAGGCTTTaGAGGCTCAGGTATAGATGG +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIISRRL*RLRYRW
Trigger: CCATCTATACCTGAGCCTCCAAAGCCTGCGGCTGAT...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCGTTGGCAATGCCAGATaGGTCAACTATGGTCTAATC +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVVGNAR*VNYGLI
Trigger: GATTAGACCATAGTTGACCCATCTGGCATTGCCAAC...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACATCTTTTAGCAGGAGTTaGCATTCGCACTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTSFSRS*HSHSFS
Trigger: TGAAAATGAGTGCGAATGTCAACTCCTGCTAAAAGA...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATAGAATGGGAGTTTCAATaGAGGCAGAGGTCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIEWEFQ*RQRSAC
Trigger: ACAGGCTGACCTCTGCCTTCATTGAAACTCCCATTC...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTTCTCACTTTCTCCTTaGCCTTCCTGTATAGTTTCC +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVFSLSP*PSCIVS
Trigger: GGAAACTATACAGGAAGGTCAAGGAGAAAGTGAGAA...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCGTTTCTTCATATGTCTaGATGCTCTCCGTGGAAATC +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVVSSYV*MLSVEI
Trigger: GATTTCCACGGAGAGCATTCAGACATATGAAGAAAC...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAAGAAGATTCTTCTTGTaGCTGTCCTTTGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKRRFFL*LSFAAL
Trigger: CAGTGCGGCAAAGGACAGGCACAAGAAGAATCTTCT...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCACTCGTCACAATGGATaGTGGAGGAGTGGTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSTRHNG*WRSGVD
Trigger: ATCCACACCACTCCTCCAGCATCCATTGTGACGAGT...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCAGAGTTGTTGTCTGTaGCTGCAGCTCCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKQSCCL*LQLHSL
Trigger: CAGAGAGTGGAGCTGCAGGCACAGACAACAACTCTG...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAGCTGCTGTTATATCCTaGAGAGCTCTGGTAAGATCT +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALAAVIS*RALVRS
Trigger: AGATCTTACCAGAGCTCTGCAGGATATAACAGCAGC...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTTGTCTTGGTTTTGCTaGTGTTATATCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVLSWFC*CYILQS
Trigger: GCTCTGCAGGATATAACAGCAGCAAAACCAAGACAA...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTATAGATGGTTCCTCTaGACCGGGTGTGACCATGGC +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKYRWFL*TGCDHG
Trigger: GCCATGGTCACACCCGGTGCAGAGGAACCATCTATA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATTCCCACTCGTCACAATaGATGCTGGAGGAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYSHSSQ*MLEEWC
Trigger: ACACCACTCCTCCAGCATCCATTGTGACGAGTGGGA...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAAATCTCTTTTCTCCTTaGAACATTCTTGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLNLFSP*NILGEG
Trigger: GCCCTCCCCAAGAATGTTCCAAGGAGAAAAGAGATT...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATATCTGGCACATCCTCTaGAGCCCCTTCTTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYIWHIL*SPFLCQ
Trigger: CTGACACAAGAAGGGGCTCCAGAGGATGTGCCAGAT...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGAGGCTCAGGTATAGATaGTTCCTCTGCACCGGGTGT +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKRLRYR*FLCTGC
Trigger: ACACCCGGTGCAGAGGAACCATCTATACCTGAGCCT...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTATTCTCACTTTCTCCTTaGCCTTCCTGTATAGTTTCC +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLFSLSP*PSCIVS
Trigger: GGAAACTATACAGGAAGGTCAAGGAGAAAGTGAGAA...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACATCCTTCTGTGAAATTTaGAAATCCATTCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTSFCEI*KSIQLT
Trigger: TGTGAGCTGAATGGATTTTCAAATTTCACAGAAGGA...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR GCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAGCACTGATATCATCTTaGAGAAATTGGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKALISS*RNWASS
Trigger: GCTGGAAGCCCAATTTCTGCAAGATGATATCAGTGC...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCCTTGTGCCTGTCCTTTaGCGCACTGATATCATCTTG +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSLVPVL*RTDIIL
Trigger: CAAGATGATATCAGTGCGGCAAAGGACAGGCACAAG...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTATTGTCTTGGTTTTGCTaGTGTTATATCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALLSWFC*CYILQS
Trigger: GCTCTGCAGGATATAACAGCAGCAAAACCAAGACAA...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAATCCTTGTCTATAGGCTaGTGGTCAATTGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKSLSIG*WSIGCP
Trigger: TGGACAACCAATTGACCAGCAGCCTATAGACAAGGA...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCCTTCATATGTCTGAATaGTCTCCGTGGAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: ENILMKASLAMPDGSTMVLHMSE*SPWKSS
Trigger: AGAAGATTTCCACGGAGAGCATTCAGACATATGAAG...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATAGGCTTCGTTGGCAATaGCAGATGGGTCAACTATGG +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYRLRWQ*QMGQLW
Trigger: CCATAGTTGACCCATCTGGCATTGCCAACGAAGCCT...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTATTGTCTATAGGCTGCTaGTCAATTGGTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALLSIGC*SIGCPS
Trigger: AGATGGACAACCAATTGACCAGCAGCCTATAGACAA...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATACAGCTCTGCACCATCTaGCTCAATCTCCTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIQLCTI*LNLLVY
Trigger: ATAGACAAGGAGATTGAGCCAGATGGTGCAGAGCTG...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCTTGTCTTTCCAATCATaGTCTCCACGATCACAGCGG +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSLSFQS*SPRSQR
Trigger: CCGCTGTGATCGTGGAGACCATGATTGGAAAGACAA...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATTGCCTTCAATCTCGATaGTACGATGATACCGGTCCA +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYCLQSR*YDDTGP
Trigger: TGGACCGGTATCATCGTATCATCGAGATTGAAGGCA...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTGCCTTCAATCTCGATaGTACGATGATACCGGTCCA +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKCLQSR*YDDTGP
Trigger: TGGACCGGTATCATCGTATCATCGAGATTGAAGGCA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTATGGAGGCTCCTTCTGTaGAATTTGAAAATCCATTCA +
Preference number: 4 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLWRLLL*NLKIHS
Trigger: TGAATGGATTTTCAAATTTCACAGAAGGAGCCTCCA...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR GCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCACTCATTTTCATACTTaGTTCGGAACTCGTCGAGCG +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSTHFHT*FGTRRA
Trigger: CGCTCGACGAGTTCCGAAGCAAGTATGAAAATGAGT...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR GCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATAGCACTGATATCATCTTaGAGAAATTGGGCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIALISS*RNWASS
Trigger: GCTGGAAGCCCAATTTCTGCAAGATGATATCAGTGC...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATTCTCCTCAATCTCCTTaGGCAGTGTCTCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYSPQSP*AVSQSA
Trigger: AGCAGATTGAGACACTGCGCAAGGAGATTGAGGAGA...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTCTCCTCAATCTCCTTaGGCAGTGTCTCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKSPQSP*AVSQSA
Trigger: AGCAGATTGAGACACTGCGCAAGGAGATTGAGGAGA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTACTTCATATGTCTGAATaGTCTCCGTGGAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALLHMSE*SPWKSS
Trigger: AGAAGATTTCCACGGAGAGCATTCAGACATATGAAG...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTGAGGGCTTTTTGTCTTaGTTTTGCTGCTGTTATATC +
Preference number: 4 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGEGFLS*FCCCYI
Trigger: GATATAACAGCAGCAAAACCAAGACAAAAAGCCCTC...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAATTGTCTATAGGCTGCTaGTCAATTGGTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKLSIGC*SIGCPS
Trigger: AGATGGACAACCAATTGACCAGCAGCCTATAGACAA...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATAGTTGGCAATGCCAGATaGGTCAACTATGGTCTAATC +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIVGNAR*VNYGLI
Trigger: GATTAGACCATAGTTGACCCATCTGGCATTGCCAAC...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCTGTCCTTTGCCGCACTaGTATCATCTTGCAGAAATT +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSCPLPH*YHLAEI
Trigger: AATTTCTGCAAGATGATATCAGTGCGGCAAAGGACA...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATGTCCTTTGCCGCACTaGTATCATCTTGCAGAAATT +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKICPLPH*YHLAEI
Trigger: AATTTCTGCAAGATGATATCAGTGCGGCAAAGGACA...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATAGTTTCTTCATATGTCTaGATGCTCTCCGTGGAAATC +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIVSSYV*MLSVEI
Trigger: GATTTCCACGGAGAGCATTCAGACATATGAAGAAAC...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGGCTGCTGTTATATCCTaGAGAGCTCTGGTAAGATCT +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKAAVIS*RALVRS
Trigger: AGATCTTACCAGAGCTCTGCAGGATATAACAGCAGC...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTATTTTTGTCTTGGTTTTaGTGCTGTTATATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALFLSWF*CCYILQ
Trigger: CTGCAGGATATAACAGCAGCAAAACCAAGACAAAAA...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATTCCTTGTCTATAGGCTaGTGGTCAATTGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYSLSIG*WSIGCP
Trigger: TGGACAACCAATTGACCAGCAGCCTATAGACAAGGA...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAGAGGGCTTTTTGTCTTaGTTTTGCTGCTGTTATATC +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKEGFLS*FCCCYI
Trigger: GATATAACAGCAGCAAAACCAAGACAAAAAGCCCTC...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTCCTTGGAACATTCTTaGGGAGGGCTTTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKSLEHS*GGLFVL
Trigger: CAAGACAAAAAGCCCTCCCCAAGAATGTTCCAAGGA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGAATCTCTTTTCTCCTTaGAACATTCTTGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKNLFSP*NILGEG
Trigger: GCCCTCCCCAAGAATGTTCCAAGGAGAAAAGAGATT...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATAATCTCTTTTCTCCTTaGAACATTCTTGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYNLFSP*NILGEG
Trigger: GCCCTCCCCAAGAATGTTCCAAGGAGAAAAGAGATT...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATACAGATGGGTCAACTATaGTCTAATCCAAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIQMGQL*SNPNRN
Trigger: GTTCCTGTTTGGATTAGACCATAGTTGACCCATCTG...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCTCTTTTAGCAGGAGTTaGCATTCGCACTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSSFSRS*HSHSFS
Trigger: TGAAAATGAGTGCGAATGTCAACTCCTGCTAAAAGA...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTGTCCTTTGCCGCACTaGTATCATCTTGCAGAAATT +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKCPLPH*YHLAEI
Trigger: AATTTCTGCAAGATGATATCAGTGCGGCAAAGGACA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTTCTCACTTTCTCCTTaGCCTTCCTGTATAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKFSLSP*PSCIVS
Trigger: GGAAACTATACAGGAAGGTCAAGGAGAAAGTGAGAA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATGTTTCTTCATATGTCTaGATGCTCTCCGTGGAAATC +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYVSSYV*MLSVEI
Trigger: GATTTCCACGGAGAGCATTCAGACATATGAAGAAAC...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAATCCTTCTGTGAAATTTaGAAATCCATTCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKSFCEI*KSIQLT
Trigger: TGTGAGCTGAATGGATTTTCAAATTTCACAGAAGGA...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR TCA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCTGGAGGCTCCTTCTGTaGAATTTGAAAATCCATTCA +
Preference number: 4 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSWRLLL*NLKIHS
Trigger: TGAATGGATTTTCAAATTTCACAGAAGGAGCCTCCA...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS-3UTR GCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATTTGTCTTGGTTTTGCTaGTGTTATATCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYLSWFC*CYILQS
Trigger: GCTCTGCAGGATATAACAGCAGCAAAACCAAGACAA...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTTGTCTATAGGCTGCTaGTCAATTGGTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKLSIGC*SIGCPS
Trigger: AGATGGACAACCAATTGACCAGCAGCCTATAGACAA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCAGATGGGTCAACTATaGTCTAATCCAAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKQMGQL*SNPNRN
Trigger: GTTCCTGTTTGGATTAGACCATAGTTGACCCATCTG...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAGATGGGTCAACTATaGTCTAATCCAAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYQMGQL*SNPNRN
Trigger: GTTCCTGTTTGGATTAGACCATAGTTGACCCATCTG...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATTCTTTTAGCAGGAGTTaGCATTCGCACTCATTTTCA +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYSFSRS*HSHSFS
Trigger: TGAAAATGAGTGCGAATGTCAACTCCTGCTAAAAGA...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR TCA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATAGATAGAGAATATAAATaGGCAAGCAATTCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIDREYK*ASNSFH
Trigger: GTGGAAGGAATTGCTTGCTCATTTATATTCTCTATC...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377868.6
CDS-3UTR GCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCTTCATATGTCTGAATaGTCTCCGTGGAAATCTTCT +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKLHMSE*SPWKSS
Trigger: AGAAGATTTCCACGGAGAGCATTCAGACATATGAAG...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATTTTTTGTCTTGGTTTTaGTGCTGTTATATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYFLSWF*CCYILQ
Trigger: CTGCAGGATATAACAGCAGCAAAACCAAGACAAAAA...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR GCA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTTTTTGTCTTGGTTTTaGTGCTGTTATATCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SNPNRNPHPFIICSKISKFLSWF*CCYILQ
Trigger: CTGCAGGATATAACAGCAGCAAAACCAAGACAAAAA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS GCA 90 bp TCCTCGGGCCCGGCCAGCTCGCCCAGGCGCTGGAAGGCATCCAGCTaGCTCCGGAGCCCGGCATGGCGCTGCTCGAGGGCGCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: SSGPASSPRRWKASS*LRSPAWRCSRARAR
Trigger: GCGGGCCCGCGCCCTCGAGCAGCGCCATGCCGGGCTCCGGAGGCAGCTGGATGCCTTCCAGCGCCTGGGCGAGCTGGCCGGGCCCGAGGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS CCA 90 bp CGCTCGGCCTCCAGGTCCCGGACGCGCTGGCGGTTGCTCTCGACTTaGCGGGCGAGGGCGTCCTCGGGCCCGGCCAGCTCGCCCAGGCGC +
Preference number: 5 (lower is better)
Translates to: RSASRSRTRWRLLST*RARASSGPASSPRR
Trigger: GCGCCTGGGCGAGCTGGCCGGGCCCGAGGACGCCCTCGCCCGCCAAGTCGAGAGCAACCGCCAGCGCGTCCGGGACCTGGAGGCCGAGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 90 bp AGGCGCTGGAAGGCATCCAGCTGCCTCCGGAGCCCGGCATGGCGCTaGTCGAGGGCGCGGGCCCGCTGGACGTGGGCGGCCACGCGCTCG +
Preference number: 5 (lower is better)
Translates to: RRWKASSCLRSPAWR*SRARARWTWAATRS
Trigger: CGAGCGCGTGGCCGCCCACGTCCAGCGGGCCCGCGCCCTCGAGCAGCGCCATGCCGGGCTCCGGAGGCAGCTGGATGCCTTCCAGCGCCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS CCA 90 bp TCGCCCAGGCGCTGGAAGGCATCCAGCTGCCTCCGGAGCCCGGCATaGCGCTGCTCGAGGGCGCGGGCCCGCTGGACGTGGGCGGCCACG +
Preference number: 5 (lower is better)
Translates to: SPRRWKASSCLRSPA*RCSRARARWTWAAT
Trigger: CGTGGCCGCCCACGTCCAGCGGGCCCGCGCCCTCGAGCAGCGCCATGCCGGGCTCCGGAGGCAGCTGGATGCCTTCCAGCGCCTGGGCGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS CCA 90 bp TGGCGGGCGAGGGCGTCCTCGGGCCCGGCCAGCTCGCCCAGGCGCTaGAAGGCATCCAGCTGCCTCCGGAGCCCGGCATGGCGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: WRARASSGPASSPRR*KASSCLRSPAWRCS
Trigger: CGAGCAGCGCCATGCCGGGCTCCGGAGGCAGCTGGATGCCTTCCAGCGCCTGGGCGAGCTGGCCGGGCCCGAGGACGCCCTCGCCCGCCA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 90 bp GCTCGGCGGCGCGCGAAGCCTCGTCGGCGTGCTCGTACTGCTCCTTaGGGGTCTGGAAGACGTAGCTGCGCCGGTACATGGCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: ARRRAKPRRRARTAP*GSGRRSCAGTWLLW
Trigger: CCAGAGCAGCCATGTACCGGCGCAGCTACGTCTTCCAGACCCGCAAGGAGCAGTACGAGCACGCCGACGAGGCTTCGCGCGCCGCCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 90 bp TCGCACTCATTTTCATACTTGCTTCGGAACTCGTCGAGCGCGCGCTaGGCCTCGGTGCCCTGGCGCTCCAGCCGGGCGCGCTCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SHSFSYLLRNSSSAR*ASVPWRSSRARSAS
Trigger: GGAGGCCGAGCGCGCCCGGCTGGAGCGCCAGGGCACCGAGGCGCAGCGCGCGCTCGACGAGTTCCGAAGCAAGTATGAAAATGAGTGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 90 bp ATTCAGCTCACATCCAAGGTGTGCTGCCTGCTGCCTGAGGTACCCTaGCTACCCAGGACTCCAAAACCCTCTCCAGAGGGCCAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: IQLTSKVCCLLPEVP*LPRTPKPSPEGQVW
Trigger: CCAGACCTGGCCCTCTGGAGAGGGTTTTGGAGTCCTGGGTAGGCAGGGTACCTCAGGCAGCAGGCAGCACACCTTGGATGTGAGCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS GCA 90 bp CTGATCAGCCGCAGGCTTTGGAGGCTCAGGTATAGATGGTTCCTCTaGACCGGGTGTGACCATGGCACAGGGTCTCCTGGACTCTTCGTC +
Preference number: 5 (lower is better)
Translates to: LISRRLWRLRYRWFL*TGCDHGTGSPGLFV
Trigger: GACGAAGAGTCCAGGAGACCCTGTGCCATGGTCACACCCGGTGCAGAGGAACCATCTATACCTGAGCCTCCAAAGCCTGCGGCTGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 90 bp AGCTCCATCCTGATCAGCCGCAGGCTTTGGAGGCTCAGGTATAGATaGTTCCTCTGCACCGGGTGTGACCATGGCACAGGGTCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SSILISRRLWRLRYR*FLCTGCDHGTGSPG
Trigger: TCCAGGAGACCCTGTGCCATGGTCACACCCGGTGCAGAGGAACCATCTATACCTGAGCCTCCAAAGCCTGCGGCTGATCAGGATGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 90 bp CTTCTTTCTCCTGCAGACCCACCTGCCCATTCTCTAAAGGGGGCTTaGGTGACTCAGGAGAGGGCTCCACCTGGCCGTCATAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: LLSPADPPAHSLKGA*VTQERAPPGRHKAQ
Trigger: CTGTGCTTTATGACGGCCAGGTGGAGCCCTCTCCTGAGTCACCCAAGCCCCCTTTAGAGAATGGGCAGGTGGGTCTGCAGGAGAAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 90 bp CCTAGTCCCAAGCACCTCAGCTCCATCCTGATCAGCCGCAGGCTTTaGAGGCTCAGGTATAGATGGTTCCTCTGCACCGGGTGTGACCAT +
Preference number: 5 (lower is better)
Translates to: PSPKHLSSILISRRL*RLRYRWFLCTGCDH
Trigger: ATGGTCACACCCGGTGCAGAGGAACCATCTATACCTGAGCCTCCAAAGCCTGCGGCTGATCAGGATGGAGCTGAGGTGCTTGGGACTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS GCA 90 bp CTGGCAGCCTCTGGGGTGGGCGCTTTGCTGGTTCTGAGTTTTTCCTaGCCTGTAGTTGCAGCGGGTGAGGCAGAAGTCTCATTTCTCTTG +
Preference number: 5 (lower is better)
Translates to: LAASGVGALLVLSFS*PVVAAGEAEVSFLL
Trigger: CAAGAGAAATGAGACTTCTGCCTCACCCGCTGCAACTACAGGGCAGGAAAAACTCAGAACCAGCAAAGCGCCCACCCCAGAGGCTGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS CCA 90 bp CACTTCCACTGTCTTATAGGCCAAAGCCTTGGGAGGGCCTTTTTCTaGCAGGCTTCTGCTCCTAGTCCCAAGCACCTCAGCTCCATCCTG +
Preference number: 5 (lower is better)
Translates to: HFHCLIGQSLGRAFF*QASAPSPKHLSSIL
Trigger: CAGGATGGAGCTGAGGTGCTTGGGACTAGGAGCAGAAGCCTGCCAGAAAAAGGCCCTCCCAAGGCTTTGGCCTATAAGACAGTGGAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS TCA 90 bp ATGAAGGCAGAGGTCAGCCTGTTGCCTTCAATCTCGATGATACGATaGTACCGGTCCAGCTCATTCTTCAGGGTTTGCTGGGCGACCGCC +
Preference number: 5 (lower is better)
Translates to: MKAEVSLLPSISMIR*YRSSSFFRVCWATA
Trigger: GGCGGTCGCCCAGCAAACCCTGAAGAATGAGCTGGACCGGTATCATCGTATCATCGAGATTGAAGGCAACAGGCTGACCTCTGCCTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 90 bp AGATCTTTCCCACCGGATCCAGTGCTGAGAGAGACTCCATGGCTCTaGGTGAACAGGGGAATGGGAGTTTCAATGAAGGCAGAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: RSFPPDPVLRETPWL*VNRGMGVSMKAEVS
Trigger: GCTGACCTCTGCCTTCATTGAAACTCCCATTCCCCTGTTCACCCAGAGCCATGGAGTCTCTCTCAGCACTGGATCCGGTGGGAAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 90 bp GCACACAGTAGGACCTCAGGAAACATCCTCAAATCTGGCAGCCTCTaGGGTGGGCGCTTTGCTGGTTCTGAGTTTTTCCTGCCCTGTAGT +
Preference number: 5 (lower is better)
Translates to: AHSRTSGNILKSGSL*GGRFAGSEFFLPCS
Trigger: ACTACAGGGCAGGAAAAACTCAGAACCAGCAAAGCGCCCACCCCAGAGGCTGCCAGATTTGAGGATGTTTCCTGAGGTCCTACTGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS-3UTR CAA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTACGGACGCGCTGGCGGTaGCTCTCGACTTGGCGGGCG +
Preference number: 5 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLRTRWR*LSTWRA
Trigger: CGCCCGCCAAGTCGAGAGCAACCGCCAGCGCGTCCG...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS CCA 90 bp CTGGTAAGATCTTTCCCACCGGATCCAGTGCTGAGAGAGACTCCATaGCTCTGGGTGAACAGGGGAATGGGAGTTTCAATGAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LVRSFPPDPVLRETP*LWVNRGMGVSMKAE
Trigger: CTCTGCCTTCATTGAAACTCCCATTCCCCTGTTCACCCAGAGCCATGGAGTCTCTCTCAGCACTGGATCCGGTGGGAAAGATCTTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS GCA 90 bp CCTTCCAGCTCTGCACCATCTGGCTCAATCTCCTTGTCTATAGGCTaGTGGTCAATTGGTTGTCCATCTTCTTTCTCCTGCAGACCCACC +
Preference number: 5 (lower is better)
Translates to: PSSSAPSGSISLSIG*WSIGCPSSFSCRPT
Trigger: GGTGGGTCTGCAGGAGAAAGAAGATGGACAACCAATTGACCAGCAGCCTATAGACAAGGAGATTGAGCCAGATGGTGCAGAGCTGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS GCA 90 bp AAATTTGAAAATCCATTCAGCTCACATCCAAGGTGTGCTGCCTGCTaGCTGAGGTACCCTGCCTACCCAGGACTCCAAAACCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: KFENPFSSHPRCAAC*LRYPAYPGLQNPLQ
Trigger: CTGGAGAGGGTTTTGGAGTCCTGGGTAGGCAGGGTACCTCAGGCAGCAGGCAGCACACCTTGGATGTGAGCTGAATGGATTTTCAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS GCA 90 bp GGTGAGGCAGAAGTCTCATTTCTCTTGTTCAGCCTCACTCACAAGTaGTGTGTCATGCGGCCTGTTGGTAAAGGGCTTGGGATCAGATCC +
Preference number: 5 (lower is better)
Translates to: GEAEVSFLLFSLTHK*CVMRPVGKGLGIRS
Trigger: GGATCTGATCCCAAGCCCTTTACCAACAGGCCGCATGACACAGCACTTGTGAGTGAGGCTGAACAAGAGAAATGAGACTTCTGCCTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS CCA 90 bp TCCAGCTCTGCACCATCTGGCTCAATCTCCTTGTCTATAGGCTGCTaGTCAATTGGTTGTCCATCTTCTTTCTCCTGCAGACCCACCTGC +
Preference number: 5 (lower is better)
Translates to: SSSAPSGSISLSIGC*SIGCPSSFSCRPTC
Trigger: GCAGGTGGGTCTGCAGGAGAAAGAAGATGGACAACCAATTGACCAGCAGCCTATAGACAAGGAGATTGAGCCAGATGGTGCAGAGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 90 bp TGCGGCCTGTTGGTAAAGGGCTTGGGATCAGATCCTGTACTCCTCTaGGCTCCCAAGGAACGTCTCTTCACCTTACCCCATCTGAAATTA +
Preference number: 5 (lower is better)
Translates to: CGLLVKGLGSDPVLL*APKERLFTLPHLKL
Trigger: TAATTTCAGATGGGGTAAGGTGAAGAGACGTTCCTTGGGAGCCCAGAGGAGTACAGGATCTGATCCCAAGCCCTTTACCAACAGGCCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS-3UTR CAA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAGCGGTTGCTCTCGACTaGGCGGGCGAGGGCGTCCTC +
Preference number: 5 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKAVALD*AGEGVL
Trigger: GAGGACGCCCTCGCCCGCCAAGTCGAGAGCAACCGC...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 90 bp TTGTCTATAGGCTGCTGGTCAATTGGTTGTCCATCTTCTTTCTCCTaGAGACCCACCTGCCCATTCTCTAAAGGGGGCTTGGGTGACTCA +
Preference number: 5 (lower is better)
Translates to: LSIGCWSIGCPSSFS*RPTCPFSKGGLGDS
Trigger: TGAGTCACCCAAGCCCCCTTTAGAGAATGGGCAGGTGGGTCTGCAGGAGAAAGAAGATGGACAACCAATTGACCAGCAGCCTATAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 90 bp TGCACCATCTGGCTCAATCTCCTTGTCTATAGGCTGCTGGTCAATTaGTTGTCCATCTTCTTTCTCCTGCAGACCCACCTGCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: CTIWLNLLVYRLLVN*LSIFFLLQTHLPIL
Trigger: GAGAATGGGCAGGTGGGTCTGCAGGAGAAAGAAGATGGACAACCAATTGACCAGCAGCCTATAGACAAGGAGATTGAGCCAGATGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS TCA 90 bp CCAGTAACATCTCCCTGGTGTGATCTGCTGCACCAGGTAGGATCCTaGGAATTCCCAAGGGAACTTGGGCCAAGTTTATCTTGGCATTTC +
Preference number: 5 (lower is better)
Translates to: PVTSPWCDLLHQVGS*EFPRELGPSLSWHF
Trigger: GAAATGCCAAGATAAACTTGGCCCAAGTTCCCTTGGGAATTCTCAGGATCCTACCTGGTGCAGCAGATCACACCAGGGAGATGTTACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS TCA 90 bp TGTGGATGCTCCACTCATCAAAGATCCAGTAACATCTCCCTGGTGTaGTCTGCTGCACCAGGTAGGATCCTGAGAATTCCCAAGGGAACT +
Preference number: 5 (lower is better)
Translates to: CGCSTHQRSSNISLV*SAAPGRILRIPKGT
Trigger: AGTTCCCTTGGGAATTCTCAGGATCCTACCTGGTGCAGCAGATCACACCAGGGAGATGTTACTGGATCTTTGATGAGTGGAGCATCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS GCA 90 bp AAGTCTCATTTCTCTTGTTCAGCCTCACTCACAAGTGCTGTGTCATaGGGCCTGTTGGTAAAGGGCTTGGGATCAGATCCTGTACTCCTC +
Preference number: 5 (lower is better)
Translates to: KSHFSCSASLTSAVS*GLLVKGLGSDPVLL
Trigger: GAGGAGTACAGGATCTGATCCCAAGCCCTTTACCAACAGGCCGCATGACACAGCACTTGTGAGTGAGGCTGAACAAGAGAAATGAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACAGGGGTCTCAGGCTCTTaGGGGCTTCTCACTTTCTCC +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTGVSGS*GLLTFS
Trigger: GGAGAAAGTGAGAAGCCCCAAAGAGCCTGAGACCCC...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACATTCTCTAAAGGGGGCTaGGGTGACTCAGGAGAGGGC +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTFSKGG*GDSGEG
Trigger: GCCCTCTCCTGAGTCACCCAAGCCCCCTTTAGAGAA...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS GCA 90 bp CGTAAGAAGACTTCTCCAGGACCCGCTCTGTCTCCTCAATCTCCTTaGGCAGTGTCTCAATCTGCTCGTTATAAAGCTGAATCTCATCGT +
Preference number: 5 (lower is better)
Translates to: RKKTSPGPALSPQSP*AVSQSARYKAESHR
Trigger: ACGATGAGATTCAGCTTTATAACGAGCAGATTGAGACACTGCGCAAGGAGATTGAGGAGACAGAGCGGGTCCTGGAGAAGTCTTCTTACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTACTCATTCTTCAGGGTTaGCTGGGCGACCGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALLILQG*LGDRQL
Trigger: CAGCTGGCGGTCGCCCAGCAAACCCTGAAGAATGAG...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS TCA 90 bp TCCTTTGCCGCACTGATATCATCTTGCAGAAATTGGGCTTCCAGCTaGAGGCGTAGGTTATGCAGCAAGGCTTCATCAGCTTCCTTGTTA +
Preference number: 5 (lower is better)
Translates to: SFAALISSCRNWASS*RRRLCSKASSASLL
Trigger: TAACAAGGAAGCTGATGAAGCCTTGCTGCATAACCTACGCCTTCAGCTGGAAGCCCAATTTCTGCAAGATGATATCAGTGCGGCAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000473415.1
ENST00000536626.7
CDS TCA 90 bp TCTGAACTTCCAGAAGATTCTTCTTGTGCCTGTCCTTTGCCGCACTaGTATCATCTTGCAGAAATTGGGCTTCCAGCTGAAGGCGTAGGT +
Preference number: 5 (lower is better)
Translates to: SELPEDSSCACPLPH*YHLAEIGLPAEGVG
Trigger: ACCTACGCCTTCAGCTGGAAGCCCAATTTCTGCAAGATGATATCAGTGCGGCAAAGGACAGGCACAAGAAGAATCTTCTGGAAGTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000473415.1
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACAGTCTCCTCAATCTCCTaGCGCAGTGTCTCAATCTGC +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTVSSIS*RSVSIC
Trigger: GCAGATTGAGACACTGCGCAAGGAGATTGAGGAGAC...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTATTCTCTAAAGGGGGCTaGGGTGACTCAGGAGAGGGC +
Preference number: 5 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALFSKGG*GDSGEG
Trigger: GCCCTCTCCTGAGTCACCCAAGCCCCCTTTAGAGAA...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACATCCAGAAGATTCTTCTaGTGCCTGTCCTTTGCCGCA +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTSRRFF*CLSFAA
Trigger: TGCGGCAAAGGACAGGCACAAGAAGAATCTTCTGGA...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCCTTGTTCCAGAGTTGTaGTCTGTGCCTGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: ENILMKASLAMPDGSTMVLVPEL*SVPAAP
Trigger: TGGAGCTGCAGGCACAGACAACAACTCTGGAACAAG...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCCTCATTCTTCAGGGTTaGCTGGGCGACCGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSLILQG*LGDRQL
Trigger: CAGCTGGCGGTCGCCCAGCAAACCCTGAAGAATGAG...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACAGCAGAGGTCAGCCTGTaGCCTTCAATCTCGATGATA +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTAEVSL*PSISMI
Trigger: TATCATCGAGATTGAAGGCAACAGGCTGACCTCTGC...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAGGGGTCTCAGGCTCTTaGGGGCTTCTCACTTTCTCC +
Preference number: 5 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKGVSGS*GLLTFS
Trigger: GGAGAAAGTGAGAAGCCCCAAAGAGCCTGAGACCCC...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACATCTGGCTCAATCTCCTaGTCTATAGGCTGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTSGSIS*SIGCWS
Trigger: TGACCAGCAGCCTATAGACAAGGAGATTGAGCCAGA...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS TCA 90 bp TTTCCAATCATGGTCTCCACGATCACAGCGGTTTCTTCATATGTCTaGATGCTCTCCGTGGAAATCTTCTCGATAGATTCCACCACTTCC +
Preference number: 5 (lower is better)
Translates to: FPIMVSTITAVSSYV*MLSVEIFSIDSTTS
Trigger: GGAAGTGGTGGAATCTATCGAGAAGATTTCCACGGAGAGCATTCAGACATATGAAGAAACCGCTGTGATCGTGGAGACCATGATTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACACGCACTGATATCATCTaGCAGAAATTGGGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTRTDII*QKLGFQ
Trigger: CTGGAAGCCCAATTTCTGCAAGATGATATCAGTGCG...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTCCAGAAGATTCTTCTaGTGCCTGTCCTTTGCCGCA +
Preference number: 5 (lower is better)
Translates to: ENILMKASLAMPDGSTMVSRRFF*CLSFAA
Trigger: TGCGGCAAAGGACAGGCACAAGAAGAATCTTCTGGA...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTACTTGTTCCAGAGTTGTaGTCTGTGCCTGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALLVPEL*SVPAAP
Trigger: TGGAGCTGCAGGCACAGACAACAACTCTGGAACAAG...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTACTTGTTCCAGAGTTGTaGTCTGTGCCTGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLLVPEL*SVPAAP
Trigger: TGGAGCTGCAGGCACAGACAACAACTCTGGAACAAG...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCTCATTCTTCAGGGTTaGCTGGGCGACCGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SNPNRNPHPFIICSKISKLILQG*LGDRQL
Trigger: CAGCTGGCGGTCGCCCAGCAAACCCTGAAGAATGAG...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAACTCTGGAGCCCCTTCTaGTGTCAGGGGACTTACTTC +
Preference number: 5 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKLWSPF*CQGTYF
Trigger: GAAGTAAGTCCCCTGACACAAGAAGGGGCTCCAGAG...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATTCTCTAAAGGGGGCTaGGGTGACTCAGGAGAGGGC +
Preference number: 5 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIFSKGG*GDSGEG
Trigger: GCCCTCTCCTGAGTCACCCAAGCCCCCTTTAGAGAA...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACACTGCTGGTCAATTGGTaGTCCATCTTCTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTLLVNW*SIFFLL
Trigger: CAGGAGAAAGAAGATGGACAACCAATTGACCAGCAG...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTCTGGCTCAATCTCCTaGTCTATAGGCTGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: ENILMKASLAMPDGSTMVSGSIS*SIGCWS
Trigger: TGACCAGCAGCCTATAGACAAGGAGATTGAGCCAGA...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS TCA 90 bp TCAGCTTCCTTGTTAAGCCGTTCAAGCATTTCTTTTAGCAGGAGTTaGCATTCGCACTCATTTTCATACTTGCTTCGGAACTCGTCGAGC +
Preference number: 5 (lower is better)
Translates to: SASLLSRSSISFSRS*HSHSFSYLLRNSSS
Trigger: GCTCGACGAGTTCCGAAGCAAGTATGAAAATGAGTGCGAATGTCAACTCCTGCTAAAAGAAATGCTTGAACGGCTTAACAAGGAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR CAA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAATCATCTTGCAGAAATaGGGCTTCCAGCTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALIILQK*GFQLKA
Trigger: CGCCTTCAGCTGGAAGCCCAATTTCTGCAAGATGAT...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCATCTTGCAGAAATaGGGCTTCCAGCTGAAGGCG +
Preference number: 5 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLIILQK*GFQLKA
Trigger: CGCCTTCAGCTGGAAGCCCAATTTCTGCAAGATGAT...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAGTCTCCTCAATCTCCTaGCGCAGTGTCTCAATCTGC +
Preference number: 5 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKVSSIS*RSVSIC
Trigger: GCAGATTGAGACACTGCGCAAGGAGATTGAGGAGAC...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAGCAGAGGTCAGCCTGTaGCCTTCAATCTCGATGATA +
Preference number: 5 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALAEVSL*PSISMI
Trigger: TATCATCGAGATTGAAGGCAACAGGCTGACCTCTGC...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACACCACCTGTACCAGCTTaGTGTCTTCCAAACCTTTTA +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTPPVPA*CLPNLL
Trigger: TAAAAGGTTTGGAAGACACAAAGCTGGTACAGGTGG...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATGGGGTCTCAGGCTCTTaGGGGCTTCTCACTTTCTCC +
Preference number: 5 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYGVSGS*GLLTFS
Trigger: GGAGAAAGTGAGAAGCCCCAAAGAGCCTGAGACCCC...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTATCTGGCTCAATCTCCTaGTCTATAGGCTGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLSGSIS*SIGCWS
Trigger: TGACCAGCAGCCTATAGACAAGGAGATTGAGCCAGA...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACAGGCACTTTTAATAGCTaGTTCCAGAGTTGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTGTFNS*FQSCCL
Trigger: CAGACAACAACTCTGGAACAAGCTATTAAAAGTGCC...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp GAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCCCACCTGTACCAGCTTaGTGTCTTCCAAACCTTTTA +
Preference number: 5 (lower is better)
Translates to: ENILMKASLAMPDGSTMVPPVPA*CLPNLL
Trigger: TAAAAGGTTTGGAAGACACAAAGCTGGTACAGGTGG...GACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCTCTGGAGCCCCTTCTaGTGTCAGGGGACTTACTTC +
Preference number: 5 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYLWSPF*CQGTYF
Trigger: GAAGTAAGTCCCCTGACACAAGAAGGGGCTCCAGAG...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACACTTCTCACTTTCTCCTaGACCTTCCTGTATAGTTTC +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTLLTFS*TFLYSF
Trigger: GAAACTATACAGGAAGGTCAAGGAGAAAGTGAGAAG...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS TCA 90 bp TCAGCTTCCTTGTTAAGCCGTTCAAGCATTTCTTTTAGCAGGAGTTaGCATTCGCACTCATTTTCATACATACTTTCTCCAGCATGGAGG +
Preference number: 5 (lower is better)
Translates to: SASLLSRSSISFSRS*HSHSFSYILSPAWR
Trigger: CCTCCATGCTGGAGAAAGTATGTATGAAAATGAGTGCGAATGTCAACTCCTGCTAAAAGAAATGCTTGAACGGCTTAACAAGGAAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377868.6
CDS-3UTR CAA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAGCTTCATCAGCTTCCTaGTTAAGCCGTTCAAGCATT +
Preference number: 5 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALASSAS*LSRSSI
Trigger: AATGCTTGAACGGCTTAACAAGGAAGCTGATGAAGC...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGGTCTCCTCAATCTCCTaGCGCAGTGTCTCAATCTGC +
Preference number: 5 (lower is better)
Translates to: SNPNRNPHPFIICSKISKVSSIS*RSVSIC
Trigger: GCAGATTGAGACACTGCGCAAGGAGATTGAGGAGAC...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCGCAGAGGTCAGCCTGTaGCCTTCAATCTCGATGATA +
Preference number: 5 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSAEVSL*PSISMI
Trigger: TATCATCGAGATTGAAGGCAACAGGCTGACCTCTGC...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACACTTTTTGTCTTGGTTTaGCTGCTGTTATATCCTGCA +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTLFVLV*LLLYPA
Trigger: TGCAGGATATAACAGCAGCAAAACCAAGACAAAAAG...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAACTCCTTGGAACATTCTaGGGGAGGGCTTTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKLLGTF*GRAFCL
Trigger: AAGACAAAAAGCCCTCCCCAAGAATGTTCCAAGGAG...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAACTGCTGGTCAATTGGTaGTCCATCTTCTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKLLVNW*SIFFLL
Trigger: CAGGAGAAAGAAGATGGACAACCAATTGACCAGCAG...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACATCTCCTGATTTCTTCTaGTCTGACTTTGTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTSPDFF*SDFVFP
Trigger: TGGAAAGACAAAGTCAGACAAGAAGAAATCAGGAGA...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCCACTCATTTTCATACTaGCTTCGGAACTCGTCGAGC +
Preference number: 5 (lower is better)
Translates to: LIQTGTLTLLSFALKYQSHSFSY*LRNSSS
Trigger: GCTCGACGAGTTCCGAAGCAAGTATGAAAATGAGTG...GCTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS-3UTR CAA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATACGCACTGATATCATCTaGCAGAAATTGGGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIRTDII*QKLGFQ
Trigger: CTGGAAGCCCAATTTCTGCAAGATGATATCAGTGCG...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTGGCACTTTTAATAGCTaGTTCCAGAGTTGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGGTFNS*FQSCCL
Trigger: CAGACAACAACTCTGGAACAAGCTATTAAAAGTGCC...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAGGCACTTTTAATAGCTaGTTCCAGAGTTGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALGTFNS*FQSCCL
Trigger: CAGACAACAACTCTGGAACAAGCTATTAAAAGTGCC...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTAATCCAAACAAGAGCTCCGTTGGTTTaGTCTTTTGTTATAATCTCT +
Preference number: 5 (lower is better)
Translates to: NEGFVGNARWVNYGLIQTRAPLV*SFVIIS
Trigger: AGAGATTATAACAAAAGACAAAACCAACGGAGCTCT...TGTTTGGATTAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAACCACCTGTACCAGCTTaGTGTCTTCCAAACCTTTTA +
Preference number: 5 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKPPVPA*CLPNLL
Trigger: TAAAAGGTTTGGAAGACACAAAGCTGGTACAGGTGG...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTACTTCTCACTTTCTCCTaGACCTTCCTGTATAGTTTC +
Preference number: 5 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLLLTFS*TFLYSF
Trigger: GAAACTATACAGGAAGGTCAAGGAGAAAGTGAGAAG...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATAGCTTCATCAGCTTCCTaGTTAAGCCGTTCAAGCATT +
Preference number: 5 (lower is better)
Translates to: LWSNPNRNPHPFIICSKIASSAS*LSRSSI
Trigger: AATGCTTGAACGGCTTAACAAGGAAGCTGATGAAGC...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCGCACTGATATCATCTaGCAGAAATTGGGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYRTDII*QKLGFQ
Trigger: CTGGAAGCCCAATTTCTGCAAGATGATATCAGTGCG...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTACTTTTTGTCTTGGTTTaGCTGCTGTTATATCCTGCA +
Preference number: 5 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALLFVLV*LLLYPA
Trigger: TGCAGGATATAACAGCAGCAAAACCAAGACAAAAAG...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGCTCCTTGGAACATTCTaGGGGAGGGCTTTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: SNPNRNPHPFIICSKISKLLGTF*GRAFCL
Trigger: AAGACAAAAAGCCCTCCCCAAGAATGTTCCAAGGAG...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTCTATCTTCTTGTCTGACTTaGTCTTTCCAATCATGGTCT +
Preference number: 5 (lower is better)
Translates to: KHFNEGFVGNARWVNYGLSSCLT*SFQSWS
Trigger: AGACCATGATTGGAAAGACAAAGTCAGACAAGAAGA...TAGACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATTTAATGAAGGCTTCGTaGGCAATGCCAGATGGGTCA +
Preference number: 5 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYLMKAS*AMPDGS
Trigger: TGACCCATCTGGCATTGCCAACGAAGCCTTCATTAA...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp TCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCAAAGTTAATGAAGGCTTCGTaGGCAATGCCAGATGGGTCA +
Preference number: 5 (lower is better)
Translates to: SNPNRNPHPFIICSKISKLMKAS*AMPDGS
Trigger: TGACCCATCTGGCATTGCCAACGAAGCCTTCATTAA...CTTTGATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp AGAAAACATTTTAATGAAGGCTTCGTTGGCAATGCCAGATGGGTCAACTATGGTAGAGCTCCGTTGGTTTaGTCTTTTGTTATAATCTCT +
Preference number: 5 (lower is better)
Translates to: RKHFNEGFVGNARWVNYGRAPLV*SFVIIS
Trigger: AGAGATTATAACAAAAGACAAAACCAACGGAGCTCT...ACCATAGTTGACCCATCTGGCATTGCCAACGAAGCCTTCATTAAAATGTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp GTCAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAGAGCTCCGTTGGTTTaGTCTTTTGTTATAATCTCT +
Preference number: 5 (lower is better)
Translates to: VNYGLIQTGTLTLLSFALRAPLV*SFVIIS
Trigger: AGAGATTATAACAAAAGACAAAACCAACGGAGCTCT...TAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAATCTTCTTGTCTGACTTaGTCTTTCCAATCATGGTCT +
Preference number: 5 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKSSCLT*SFQSWS
Trigger: AGACCATGATTGGAAAGACAAAGTCAGACAAGAAGA...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CAACTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAATCTCCTGATTTCTTCTaGTCTGACTTTGTCTTTCCA +
Preference number: 5 (lower is better)
Translates to: QLWSNPNRNPHPFIICSKSPDFF*SDFVFP
Trigger: TGGAAAGACAAAGTCAGACAAGAAGAAATCAGGAGA...TTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp TATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCTTCTCACTTTCTCCTaGACCTTCCTGTATAGTTTC +
Preference number: 5 (lower is better)
Translates to: YGLIQTGTLTLLSFALKYLLTFS*TFLYSF
Trigger: GAAACTATACAGGAAGGTCAAGGAGAAAGTGAGAAG...ATATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS-3UTR CAA 90 bp CTATGGTCTAATCCAAACAGGAACCCTCACCCTTTTATCATTTGCTCTAAAATATCTTCTTGTCTGACTTaGTCTTTCCAATCATGGTCT +
Preference number: 5 (lower is better)
Translates to: LWSNPNRNPHPFIICSKISSCLT*SFQSWS
Trigger: AGACCATGATTGGAAAGACAAAGTCAGACAAGAAGA...TATTTTAGAGCAAATGATAAAAGGGTGAGGGTTCCTGTTTGGATTAGACCATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CAA 90 bp GCGCTCGGCCTCCAGGTCCCGGACGCGCTGGCGGTTGCTCTCGACTaGGCGGGCGAGGGCGTCCTCGGGCCCGGCCAGCTCGCCCAGGCG +
Preference number: 6 (lower is better)
Translates to: ALGLQVPDALAVALD*AGEGVLGPGQLAQA
Trigger: CGCCTGGGCGAGCTGGCCGGGCCCGAGGACGCCCTCGCCCGCCAAGTCGAGAGCAACCGCCAGCGCGTCCGGGACCTGGAGGCCGAGCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 72 bp AAGGCATCCAGCTGCCTCCGGAGCCCGGCATGGCGCTaGTCGAGGGCGCGGGCCCGCTGGACGTGGGCGGCC +
Preference number: 6 (lower is better)
Translates to: KASSCLRSPAWR*SRARARWTWAA
Trigger: GGCCGCCCACGTCCAGCGGGCCCGCGCCCTCGAGCAGCGCCATGCCGGGCTCCGGAGGCAGCTGGATGCCTT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 72 bp CGCGCTCGGCCTCCAGGTCCCGGACGCGCTGGCGGTTaGTCTCGACTTGGCGGGCGAGGGCGTCCTCGGGCC +
Preference number: 6 (lower is better)
Translates to: RARPPGPGRAGG*SRLGGRGRPRA
Trigger: GGCCCGAGGACGCCCTCGCCCGCCAAGTCGAGAGCAACCGCCAGCGCGTCCGGGACCTGGAGGCCGAGCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS CAA 72 bp GCGCGCTCGGCCTCCAGGTCCCGGACGCGCTGGCGGTaGCTCTCGACTTGGCGGGCGAGGGCGTCCTCGGGC +
Preference number: 6 (lower is better)
Translates to: ARSASRSRTRWR*LSTWRARASSG
Trigger: GCCCGAGGACGCCCTCGCCCGCCAAGTCGAGAGCAACCGCCAGCGCGTCCGGGACCTGGAGGCCGAGCGCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 72 bp CCGGCCAGCTCGCCCAGGCGCTGGAAGGCATCCAGCTaGCTCCGGAGCCCGGCATGGCGCTGCTCGAGGGCG +
Preference number: 6 (lower is better)
Translates to: PASSPRRWKASS*LRSPAWRCSRA
Trigger: CGCCCTCGAGCAGCGCCATGCCGGGCTCCGGAGGCAGCTGGATGCCTTCCAGCGCCTGGGCGAGCTGGCCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 72 bp TGCTTCGGAACTCGTCGAGCGCGCGCTGCGCCTCGGTaGCCTGGCGCTCCAGCCGGGCGCGCTCGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: CFGTRRARAAPR*PGAPAGRARPP
Trigger: TGGAGGCCGAGCGCGCCCGGCTGGAGCGCCAGGGCACCGAGGCGCAGCGCGCGCTCGACGAGTTCCGAAGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS CCA 72 bp CGCTGGAAGGCATCCAGCTGCCTCCGGAGCCCGGCATaGCGCTGCTCGAGGGCGCGGGCCCGCTGGACGTGG +
Preference number: 6 (lower is better)
Translates to: RWKASSCLRSPA*RCSRARARWTW
Trigger: CCACGTCCAGCGGGCCCGCGCCCTCGAGCAGCGCCATGCCGGGCTCCGGAGGCAGCTGGATGCCTTCCAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS CCA 72 bp AGGGCGTCCTCGGGCCCGGCCAGCTCGCCCAGGCGCTaGAAGGCATCCAGCTGCCTCCGGAGCCCGGCATGG +
Preference number: 6 (lower is better)
Translates to: RASSGPASSPRR*KASSCLRSPAW
Trigger: CCATGCCGGGCTCCGGAGGCAGCTGGATGCCTTCCAGCGCCTGGGCGAGCTGGCCGGGCCCGAGGACGCCCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS CCA 72 bp TCCAGGTCCCGGACGCGCTGGCGGTTGCTCTCGACTTaGCGGGCGAGGGCGTCCTCGGGCCCGGCCAGCTCG +
Preference number: 6 (lower is better)
Translates to: SRSRTRWRLLST*RARASSGPASS
Trigger: CGAGCTGGCCGGGCCCGAGGACGCCCTCGCCCGCCAAGTCGAGAGCAACCGCCAGCGCGTCCGGGACCTGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS CAA 72 bp CTCCAGGTCCCGGACGCGCTGGCGGTTGCTCTCGACTaGGCGGGCGAGGGCGTCCTCGGGCCCGGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LQVPDALAVALD*AGEGVLGPGQL
Trigger: GAGCTGGCCGGGCCCGAGGACGCCCTCGCCCGCCAAGTCGAGAGCAACCGCCAGCGCGTCCGGGACCTGGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 72 bp GCTCGTACTGCTCCTTGCGGGTCTGGAAGACGTAGCTaGGCCGGTACATGGCTGCTCTGGCGCGGGCGCGCG +
Preference number: 6 (lower is better)
Translates to: ARTAPCGSGRRS*AGTWLLWRGRA
Trigger: CGCGCGCCCGCGCCAGAGCAGCCATGTACCGGCGCAGCTACGTCTTCCAGACCCGCAAGGAGCAGTACGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 72 bp TTTTCATACTTGCTTCGGAACTCGTCGAGCGCGCGCTaGGCCTCGGTGCCCTGGCGCTCCAGCCGGGCGCGC +
Preference number: 6 (lower is better)
Translates to: FSYLLRNSSSAR*ASVPWRSSRAR
Trigger: GCGCGCCCGGCTGGAGCGCCAGGGCACCGAGGCGCAGCGCGCGCTCGACGAGTTCCGAAGCAAGTATGAAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 72 bp CGCGCGAAGCCTCGTCGGCGTGCTCGTACTGCTCCTTaGGGGTCTGGAAGACGTAGCTGCGCCGGTACATGG +
Preference number: 6 (lower is better)
Translates to: RAKPRRRARTAP*GSGRRSCAGTW
Trigger: CCATGTACCGGCGCAGCTACGTCTTCCAGACCCGCAAGGAGCAGTACGAGCACGCCGACGAGGCTTCGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS GCA 72 bp ACATCCAAGGTGTGCTGCCTGCTGCCTGAGGTACCCTaGCTACCCAGGACTCCAAAACCCTCTCCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: TSKVCCLLPEVP*LPRTPKPSPEG
Trigger: GCCCTCTGGAGAGGGTTTTGGAGTCCTGGGTAGGCAGGGTACCTCAGGCAGCAGGCAGCACACCTTGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS GCA 72 bp CGCAGGCTTTGGAGGCTCAGGTATAGATGGTTCCTCTaGACCGGGTGTGACCATGGCACAGGGTCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: RRLWRLRYRWFL*TGCDHGTGSPG
Trigger: TCCAGGAGACCCTGTGCCATGGTCACACCCGGTGCAGAGGAACCATCTATACCTGAGCCTCCAAAGCCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 72 bp CTGATCAGCCGCAGGCTTTGGAGGCTCAGGTATAGATaGTTCCTCTGCACCGGGTGTGACCATGGCACAGGG +
Preference number: 6 (lower is better)
Translates to: LISRRLWRLRYR*FLCTGCDHGTG
Trigger: CCCTGTGCCATGGTCACACCCGGTGCAGAGGAACCATCTATACCTGAGCCTCCAAAGCCTGCGGCTGATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 72 bp AAGCACCTCAGCTCCATCCTGATCAGCCGCAGGCTTTaGAGGCTCAGGTATAGATGGTTCCTCTGCACCGGG +
Preference number: 6 (lower is better)
Translates to: KHLSSILISRRL*RLRYRWFLCTG
Trigger: CCCGGTGCAGAGGAACCATCTATACCTGAGCCTCCAAAGCCTGCGGCTGATCAGGATGGAGCTGAGGTGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CAA 72 bp GATACGATGATACCGGTCCAGCTCATTCTTCAGGGTTaGCTGGGCGACCGCCAGCTGCCGGCAGTCGTAAGA +
Preference number: 6 (lower is better)
Translates to: DTMIPVQLILQG*LGDRQLPAVVR
Trigger: TCTTACGACTGCCGGCAGCTGGCGGTCGCCCAGCAAACCCTGAAGAATGAGCTGGACCGGTATCATCGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CAA 90 bp GCCTCACTCACAAGTGCTGTGTCATGCGGCCTGTTGGTAAAGGGCTaGGGATCAGATCCTGTACTCCTCTGGGCTCCCAAGGAACGTCTC +
Preference number: 6 (lower is better)
Translates to: ASLTSAVSCGLLVKG*GSDPVLLWAPKERL
Trigger: GAGACGTTCCTTGGGAGCCCAGAGGAGTACAGGATCTGATCCCAAGCCCTTTACCAACAGGCCGCATGACACAGCACTTGTGAGTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS GCA 72 bp AATCCATTCAGCTCACATCCAAGGTGTGCTGCCTGCTaGCTGAGGTACCCTGCCTACCCAGGACTCCAAAAC +
Preference number: 6 (lower is better)
Translates to: NPFSSHPRCAAC*LRYPAYPGLQN
Trigger: GTTTTGGAGTCCTGGGTAGGCAGGGTACCTCAGGCAGCAGGCAGCACACCTTGGATGTGAGCTGAATGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS GCA 72 bp GAAAATCCATTCAGCTCACATCCAAGGTGTGCTGCCTaGTGCCTGAGGTACCCTGCCTACCCAGGACTCCAA +
Preference number: 6 (lower is better)
Translates to: ENPFSSHPRCAA*CLRYPAYPGLQ
Trigger: TTGGAGTCCTGGGTAGGCAGGGTACCTCAGGCAGCAGGCAGCACACCTTGGATGTGAGCTGAATGGATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377868.6
ENST00000536626.7
CDS CAA 72 bp ACAAGTGCTGTGTCATGCGGCCTGTTGGTAAAGGGCTaGGGATCAGATCCTGTACTCCTCTGGGCTCCCAAG +
Preference number: 6 (lower is better)
Translates to: TSAVSCGLLVKG*GSDPVLLWAPK
Trigger: CTTGGGAGCCCAGAGGAGTACAGGATCTGATCCCAAGCCCTTTACCAACAGGCCGCATGACACAGCACTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS CAA 90 bp AATCTCGATGATACGATGATACCGGTCCAGCTCATTCTTCAGGGTTaGCTGGGCGACCGCCAGCTGCCGGCAGTCGTAAGAAGACTTCTC +
Preference number: 6 (lower is better)
Translates to: NLDDTMIPVQLILQG*LGDRQLPAVVRRLL
Trigger: GAGAAGTCTTCTTACGACTGCCGGCAGCTGGCGGTCGCCCAGCAAACCCTGAAGAATGAGCTGGACCGGTATCATCGTATCATCGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CAA 90 bp TTCTCTTGTTCAGCCTCACTCACAAGTGCTGTGTCATGCGGCCTGTaGGTAAAGGGCTTGGGATCAGATCCTGTACTCCTCTGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: FSCSASLTSAVSCGL*VKGLGSDPVLLWAP
Trigger: GGGAGCCCAGAGGAGTACAGGATCTGATCCCAAGCCCTTTACCAACAGGCCGCATGACACAGCACTTGTGAGTGAGGCTGAACAAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS CAA 72 bp TCAGCCTCACTCACAAGTGCTGTGTCATGCGGCCTGTaGGTAAAGGGCTTGGGATCAGATCCTGTACTCCTC +
Preference number: 6 (lower is better)
Translates to: SASLTSAVSCGL*VKGLGSDPVLL
Trigger: GAGGAGTACAGGATCTGATCCCAAGCCCTTTACCAACAGGCCGCATGACACAGCACTTGTGAGTGAGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS CCA 72 bp GCCTTTGCTTATCTGCCCTCCATCTGGCACATCCTCTaGAGCCCCTTCTTGTGTCAGGGGACTTACTTCTTT +
Preference number: 6 (lower is better)
Translates to: AFAYLPSIWHIL*SPFLCQGTYFF
Trigger: AAAGAAGTAAGTCCCCTGACACAAGAAGGGGCTCCAGAGGATGTGCCAGATGGAGGGCAGATAAGCAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 72 bp TTGGTAAAGGGCTTGGGATCAGATCCTGTACTCCTCTaGGCTCCCAAGGAACGTCTCTTCACCTTACCCCAT +
Preference number: 6 (lower is better)
Translates to: LVKGLGSDPVLL*APKERLFTLPH
Trigger: ATGGGGTAAGGTGAAGAGACGTTCCTTGGGAGCCCAGAGGAGTACAGGATCTGATCCCAAGCCCTTTACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS CAA 72 bp AGGTCTGGGCTGAGAAAGAAAGGAGGCTTTAGAGGTTaGCAGAGAGGAAGTGACTCACTGGCTCAAGGGGTG +
Preference number: 6 (lower is better)
Translates to: RSGLRKKGGFRG*QRGSDSLAQGV
Trigger: CACCCCTTGAGCCAGTGAGTCACTTCCTCTCTGCAAACCTCTAAAGCCTCCTTTCTTTCTCAGCCCAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377868.6
CDS TCA 72 bp GAGGTCAGCCTGTTGCCTTCAATCTCGATGATACGATaGTACCGGTCCAGCTCATTCTTCAGGGTTTGCTGG +
Preference number: 6 (lower is better)
Translates to: EVSLLPSISMIR*YRSSSFFRVCW
Trigger: CCAGCAAACCCTGAAGAATGAGCTGGACCGGTATCATCGTATCATCGAGATTGAAGGCAACAGGCTGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS TCA 72 bp GGTTCTGAGTTTTTCCTGCCCTGTAGTTGCAGCGGGTaGGGCAGAAGTCTCATTTCTCTTGTTCAGCCTCAC +
Preference number: 6 (lower is better)
Translates to: GSEFFLPCSCSG*GRSLISLVQPH
Trigger: GTGAGGCTGAACAAGAGAAATGAGACTTCTGCCTCACCCGCTGCAACTACAGGGCAGGAAAAACTCAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS GCA 72 bp TTCTCTTGTTCAGCCTCACTCACAAGTGCTGTGTCATaGGGCCTGTTGGTAAAGGGCTTGGGATCAGATCCT +
Preference number: 6 (lower is better)
Translates to: FSCSASLTSAVS*GLLVKGLGSDP
Trigger: AGGATCTGATCCCAAGCCCTTTACCAACAGGCCGCATGACACAGCACTTGTGAGTGAGGCTGAACAAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS GCA 72 bp GAAGTCTCATTTCTCTTGTTCAGCCTCACTCACAAGTaGTGTGTCATGCGGCCTGTTGGTAAAGGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: EVSFLLFSLTHK*CVMRPVGKGLG
Trigger: CCCAAGCCCTTTACCAACAGGCCGCATGACACAGCACTTGTGAGTGAGGCTGAACAAGAGAAATGAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS CCA 72 bp ACGTTTCTCTTCAGGGCCTTCCAGCTCTGCACCATCTaGCTCAATCTCCTTGTCTATAGGCTGCTGGTCAAT +
Preference number: 6 (lower is better)
Translates to: TFLFRAFQLCTI*LNLLVYRLLVN
Trigger: ATTGACCAGCAGCCTATAGACAAGGAGATTGAGCCAGATGGTGCAGAGCTGGAAGGCCCTGAAGAGAAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS TCA 72 bp TCCACTCATCAAAGATCCAGTAACATCTCCCTGGTGTaGTCTGCTGCACCAGGTAGGATCCTGAGAATTCCC +
Preference number: 6 (lower is better)
Translates to: STHQRSSNISLV*SAAPGRILRIP
Trigger: GGGAATTCTCAGGATCCTACCTGGTGCAGCAGATCACACCAGGGAGATGTTACTGGATCTTTGATGAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS GCA 72 bp ACTTCTCCAGGACCCGCTCTGTCTCCTCAATCTCCTTaGGCAGTGTCTCAATCTGCTCGTTATAAAGCTGAA +
Preference number: 6 (lower is better)
Translates to: TSPGPALSPQSP*AVSQSARYKAE
Trigger: TTCAGCTTTATAACGAGCAGATTGAGACACTGCGCAAGGAGATTGAGGAGACAGAGCGGGTCCTGGAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 72 bp TGGCTCAATCTCCTTGTCTATAGGCTGCTGGTCAATTaGTTGTCCATCTTCTTTCTCCTGCAGACCCACCTG +
Preference number: 6 (lower is better)
Translates to: WLNLLVYRLLVN*LSIFFLLQTHL
Trigger: CAGGTGGGTCTGCAGGAGAAAGAAGATGGACAACCAATTGACCAGCAGCCTATAGACAAGGAGATTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS TCA 72 bp GCACTGATATCATCTTGCAGAAATTGGGCTTCCAGCTaGAGGCGTAGGTTATGCAGCAAGGCTTCATCAGCT +
Preference number: 6 (lower is better)
Translates to: ALISSCRNWASS*RRRLCSKASSA
Trigger: AGCTGATGAAGCCTTGCTGCATAACCTACGCCTTCAGCTGGAAGCCCAATTTCTGCAAGATGATATCAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000473415.1
ENST00000536626.7
CDS GCA 72 bp TCTGCACCATCTGGCTCAATCTCCTTGTCTATAGGCTaGTGGTCAATTGGTTGTCCATCTTCTTTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SAPSGSISLSIG*WSIGCPSSFSC
Trigger: GCAGGAGAAAGAAGATGGACAACCAATTGACCAGCAGCCTATAGACAAGGAGATTGAGCCAGATGGTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 72 bp GCACCATCTGGCTCAATCTCCTTGTCTATAGGCTGCTaGTCAATTGGTTGTCCATCTTCTTTCTCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: APSGSISLSIGC*SIGCPSSFSCR
Trigger: TCTGCAGGAGAAAGAAGATGGACAACCAATTGACCAGCAGCCTATAGACAAGGAGATTGAGCCAGATGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS TCA 72 bp CCAGAAGATTCTTCTTGTGCCTGTCCTTTGCCGCACTaGTATCATCTTGCAGAAATTGGGCTTCCAGCTGAA +
Preference number: 6 (lower is better)
Translates to: PEDSSCACPLPH*YHLAEIGLPAE
Trigger: TTCAGCTGGAAGCCCAATTTCTGCAAGATGATATCAGTGCGGCAAAGGACAGGCACAAGAAGAATCTTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000473415.1
ENST00000536626.7
CDS CAA 72 bp CTCATCGTCATAACACTCATGGGCACTTTTAATAGCTaGTTCCAGAGTTGTTGTCTGTGCCTGCAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: LIVITLMGTFNS*FQSCCLCLQLH
Trigger: GTGGAGCTGCAGGCACAGACAACAACTCTGGAACAAGCTATTAAAAGTGCCCATGAGTGTTATGACGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS TCA 72 bp ATGGTCTCCACGATCACAGCGGTTTCTTCATATGTCTaGATGCTCTCCGTGGAAATCTTCTCGATAGATTCC +
Preference number: 6 (lower is better)
Translates to: MVSTITAVSSYV*MLSVEIFSIDS
Trigger: GGAATCTATCGAGAAGATTTCCACGGAGAGCATTCAGACATATGAAGAAACCGCTGTGATCGTGGAGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377868.6
ENST00000377873.8
ENST00000536626.7
CDS CCA 72 bp GCACCAGGTAGGATCCTGAGAATTCCCAAGGGAACTTaGGCCAAGTTTATCTTGGCATTTCTGTTTTCACTT +
Preference number: 6 (lower is better)
Translates to: APGRILRIPKGT*AKFILAFLFSL
Trigger: AAGTGAAAACAGAAATGCCAAGATAAACTTGGCCCAAGTTCCCTTGGGAATTCTCAGGATCCTACCTGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS CAA 72 bp CTGAGAATTCCCAAGGGAACTTGGGCCAAGTTTATCTaGGCATTTCTGTTTTCACTTGTGATCTCCTTATTC +
Preference number: 6 (lower is better)
Translates to: LRIPKGTWAKFI*AFLFSLVISLF
Trigger: GAATAAGGAGATCACAAGTGAAAACAGAAATGCCAAGATAAACTTGGCCCAAGTTCCCTTGGGAATTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473415.1
CDS TCA 72 bp TTGTTAAGCCGTTCAAGCATTTCTTTTAGCAGGAGTTaGCATTCGCACTCATTTTCATACTTGCTTCGGAAC +
Preference number: 6 (lower is better)
Translates to: LLSRSSISFSRS*HSHSFSYLLRN
Trigger: GTTCCGAAGCAAGTATGAAAATGAGTGCGAATGTCAACTCCTGCTAAAAGAAATGCTTGAACGGCTTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377873.8
CDS TCA 72 bp TTGTTAAGCCGTTCAAGCATTTCTTTTAGCAGGAGTTaGCATTCGCACTCATTTTCATACATACTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: LLSRSSISFSRS*HSHSFSYILSP
Trigger: TGGAGAAAGTATGTATGAAAATGAGTGCGAATGTCAACTCCTGCTAAAAGAAATGCTTGAACGGCTTAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377868.6