RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BFAR (Homo sapiens)

Ensembl gene IDs: ENSG00000103429, ENSG00000275618

Ensembl transcript IDs: ENST00000261658.7, ENST00000562442.5, ENST00000562545.5, ENST00000563082.1, ENST00000563313.5, ENST00000563971.5, ENST00000564078.1, ENST00000566520.5, ENST00000566710.1, ENST00000570219.1, ENST00000619034.2, ENST00000631407.1, ENST00000631651.1, ENST00000631725.1, ENST00000632391.1, ENST00000632966.1, ENST00000633638.1, ENST00000634058.1, ENST00000634083.1, ENST00000634109.1

Found 533 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTaGGGACTGAGCCTCCTAGTCCCTGTGAGGAAGGTGGCTGGGTGG +
Preference number: 1 (lower is better)
Translates to: SPTPCPLRTLSLASR*GLSLLVPVRKVAGW
Trigger: CCACCCAGCCACCTTCCTCACAGGGACTAGGAGGCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR CCA 90 bp CGTTGGGGACTGAGCCTCCTAGTCCCTGTGAGGAAGGTGGCTGGGTaGGAAGGGCTGCTGCTGTGTCAGCCAAACAGACAATCCTCCCTG +
Preference number: 1 (lower is better)
Translates to: RWGLSLLVPVRKVAG*EGLLLCQPNRQSSL
Trigger: CAGGGAGGATTGTCTGTTTGGCTGACACAGCAGCAGCCCTTCCCACCCAGCCACCTTCCTCACAGGGACTAGGAGGCTCAGTCCCCAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR GCA 90 bp CCTTCTGATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTaGCAGCCGTTGGGGACTGAGCCTCCTAGTCCCTGTGAGGAAGGT +
Preference number: 1 (lower is better)
Translates to: PSDVTHTMSTEDPES*QPLGTEPPSPCEEG
Trigger: ACCTTCCTCACAGGGACTAGGAGGCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACATCAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR GCA 90 bp AAAGCTCAGACGTCAGCGGGACTTGAAGAGTCTCAGCCTGGGCAGTaGCAGTCACAACACCTGGGTTTCCAGCCGCCGGAGTTCCTTGAC +
Preference number: 1 (lower is better)
Translates to: KAQTSAGLEESQPGQ*QSQHLGFQPPEFLD
Trigger: GTCAAGGAACTCCGGCGGCTGGAAACCCAGGTGTTGTGACTGGCACTGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTCTGAGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR TCA 90 bp AGTCAAACAGGTACAGGTAGAGCAGACTCAGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACAGGGACCTGCCTGGGTTCACAGCCT +
Preference number: 1 (lower is better)
Translates to: SQTGTGRADSAWGSS*GRIAGTGTCLGSQP
Trigger: AGGCTGTGAACCCAGGCAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAGTCTGCTCTACCTGTACCTGTTTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR GCA 90 bp AGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTaGCACCCACAGGCTGAGGGGGAGAGGACATGGTTGGAGCTTTTG +
Preference number: 1 (lower is better)
Translates to: SQTDNPPCADVSPCS*HPQAEGERTWLELL
Trigger: CAAAAGCTCCAACCATGTCCTCTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
3UTR TCA 90 bp TGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCAGTGCCAGTCACAACACCTGGGTTT +
Preference number: 1 (lower is better)
Translates to: CLTPLKHQSSDVSGT*RVSAWAVPVTTPGF
Trigger: AAACCCAGGTGTTGTGACTGGCACTGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR TCA 90 bp TGTCCTCCCCAGAGCTGTCTTCTTGCAGAGGGCAGATGGTGTGGATaGAAGGTAGGAAGGTGTCGGTGTAGTCAAACAGGTACAGGTAGA +
Preference number: 1 (lower is better)
Translates to: CPPQSCLLAEGRWCG*KVGRCRCSQTGTGR
Trigger: TCTACCTGTACCTGTTTGACTACACCGACACCTTCCTACCTTTCATCCACACCATCTGCCCTCTGCAAGAAGACAGCTCTGGGGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
3UTR GCA 90 bp AGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTaGTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATG +
Preference number: 1 (lower is better)
Translates to: SWYGRKEYLTRNSLH*FHVGSLRSRSLVTM
Trigger: CATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
3UTR CCA 90 bp ATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATaGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTCCA +
Preference number: 1 (lower is better)
Translates to: MDLQPVPSKLSNQLV*KEGVFDQELSPLLP
Trigger: TGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
3UTR GCA 90 bp AAAACAATTCTGAATAACATGAAGGCCACTAAATCTAATGGGAACTaGCCGACATCCCTCTCAATCTCTCCATTCAGAGAAAGGGATCCA +
Preference number: 1 (lower is better)
Translates to: KTILNNMKATKSNGN*PTSLSISPFRERDP
Trigger: TGGATCCCTTTCTCTGAATGGAGAGATTGAGAGGGATGTCGGGCAGTTCCCATTAGATTTAGTGGCCTTCATGTTATTCAGAATTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR CCA 90 bp TTCCAGCCGCCGGAGTTCCTTGACCACAAGATCAATGTTAATAATTaGGTTAAAGTACAGGGCCCAGTAAAACAAACAGTTGCAAACAAA +
Preference number: 1 (lower is better)
Translates to: FQPPEFLDHKINVNN*VKVQGPVKQTVANK
Trigger: TTTGTTTGCAACTGTTTGTTTTACTGGGCCCTGTACTTTAACCCAATTATTAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR GCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGAGGAAGTCCGCTCCCTaGCTCACCCCTCTTAAGCAT +
Preference number: 2 (lower is better)
Translates to: PPCADVSPCSCHPQAEGERKSAP*LTPLKH
Trigger: ATGCTTAAGAGGGGTGAGGCAGGGAGCGGACTTCCT...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
3UTR-3UTR TCA 90 bp AGCAGACTCAGCCTGGGGGAGCTCTTGAGGGCGTATAGCAGGAACAGGGACCTGGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: SRLSLGELLRAYSRNRDLDVSGT*RVSAWA
Trigger: TGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTC...CAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR GCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGGTCAGTCCTTGCTCGTaGCACCCACAGGCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMVSPCS*HPQAEG
Trigger: CCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGAC...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR GCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGGCGGATGTCAGTCCTTaGTCGTGCCACCCACAGGCT +
Preference number: 2 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMADVSP*SCHPQA
Trigger: AGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGC...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGTGTGAGGAAGGTGGCTaGGTGGGAAGGGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMCEEGG*VGRAAA
Trigger: AGCAGCAGCCCTTCCCACCCAGCCACCTTCCTCACA...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR CAA 90 bp CTGGTCTCAGGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTaGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACC +
Preference number: 2 (lower is better)
Translates to: LVSGSEIRILCQSLR*GRGLMWHPSDVTHT
Trigger: GGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCCTGAGACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR GCA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGGAAGTCCGCTCCCTaGCTCACCCCTCTTAAGCAT +
Preference number: 2 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLRKSAP*LTPLKH
Trigger: ATGCTTAAGAGGGGTGAGGCAGGGAGCGGACTTCCT...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR GCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGGGTGGGAAGGGCTGCTaGTGTGTCAGCCAAACAGAC +
Preference number: 2 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMGGKGC*CVSQTD
Trigger: GTCTGTTTGGCTGACACAGCAGCAGCCCTTCCCACC...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR GCA 90 bp ACTGCCCGACATCCCTCTCAATCTCTCCATTCAGAGAAAGGGATCCAGACCTTCGTCAGTCCTTGCTCGTaGCACCCACAGGCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: TARHPSQSLHSEKGIQTFVSPCS*HPQAEG
Trigger: CCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGAC...GAAGGTCTGGATCCCTTTCTCTGAATGGAGAGATTGAGAGGGATGTCGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR GCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGAGACAATCCTCCCTGTaGGGATGTCAGTCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMRQSSL*GCQSLL
Trigger: GAGCAAGGACTGACATCCGCACAGGGAGGATTGTCT...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR GCA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACAGACAATCCTCCCTGTaGGGATGTCAGTCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHRQSSL*GCQSLL
Trigger: GAGCAAGGACTGACATCCGCACAGGGAGGATTGTCT...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR TCA 90 bp AACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: NSLHCFHVGSLRSRSLVTDVSGT*RVSAWA
Trigger: TGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTC...CGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR TCA 90 bp TCCAGAAATGGCTCCACATCCTCTGAGGCACGGTCTTCAGTTCACTTCTCGACCCACGTTCTAGCTCCATaGGGATGGCTCTCCTGTGGC +
Preference number: 2 (lower is better)
Translates to: SRNGSTSSEARSSVHFSTHVLAP*GWLSCG
Trigger: GCCACAGGAGAGCCATCCTCATGGAGCTAGAACGTG...GGTCGAGAAGTGAACTGAAGACCGTGCCTCAGAGGATGTGGAGCCATTTCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR TCA 90 bp CTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACA +
Preference number: 2 (lower is better)
Translates to: LSPLLPRRLLKIQKLGDDAWGSS*GRIAGT
Trigger: TGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGC...ATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
3UTR-3UTR TCA 90 bp TCCAGAAATGGCTCCACATCCTCTGAGGCACGGTCTTCAGTTCACTTCTCGACCGATCCAGAAGCTTGGTaGCGATGTCCTCCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: SRNGSTSSEARSSVHFSTDPEAW*RCPPQS
Trigger: GCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATC...GGTCGAGAAGTGAACTGAAGACCGTGCCTCAGAGGATGTGGAGCCATTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR TCA 90 bp CAGCCTGGGCAGTGCCAGTCACAACACCTGGGTTTCCAGCCGCCGGAGTTCCTTAAAAAGCCCCTGCGTTaGTACTTTCCAGAAATGGCT +
Preference number: 2 (lower is better)
Translates to: QPGQCQSQHLGFQPPEFLKKPLR*YFPEMA
Trigger: AGCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTT...AAGGAACTCCGGCGGCTGGAAACCCAGGTGTTGTGACTGGCACTGCCCAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CCA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGGAGGGGGAGAGGACATaGTTGGAGCTTTTGATATAC +
Preference number: 2 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLEGERT*LELLIY
Trigger: GTATATCAAAAGCTCCAACCATGTCCTCTCCCCCTC...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR TCA 90 bp GATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACATCTCACACCTGCGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: DVGLFLQGLSSKMTSHTCDVSGT*RVSAWA
Trigger: TGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTC...GCAGGTGTGAGATGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR TCA 90 bp GATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACATCTCACACCTGCGGTTGGGGAGGGGACTaGTGTGGCACCCTTCTGATG +
Preference number: 2 (lower is better)
Translates to: DVGLFLQGLSSKMTSHTCGWGGD*CGTLLM
Trigger: CATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACC...GCAGGTGTGAGATGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR GCA 90 bp GTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGTCTAGGAAGTCCGCTCCCTaGCTCACCCCTCTTAAGCAT +
Preference number: 2 (lower is better)
Translates to: VGSLRSRSLVTMSSPELSRKSAP*LTPLKH
Trigger: ATGCTTAAGAGGGGTGAGGCAGGGAGCGGACTTCCT...AGACAGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR GCA 90 bp GATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACATCTCACACCTGCGCGGATGTCAGTCCTTaGTCGTGCCACCCACAGGCT +
Preference number: 2 (lower is better)
Translates to: DVGLFLQGLSSKMTSHTCADVSP*SCHPQA
Trigger: AGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGC...GCAGGTGTGAGATGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR TCA 90 bp GAGTATTTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCCACGTTCTAGCTCCATaGGGATGGCTCTCCTGTGGC +
Preference number: 2 (lower is better)
Translates to: EYLTRNSLHCFHVGSLRSHVLAP*GWLSCG
Trigger: GCCACAGGAGAGCCATCCTCATGGAGCTAGAACGTG...GGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR TCA 90 bp AGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTCCACGATCCAGAAGCTTGGTaGCGATGTCCTCCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: SWYGRKEYLTRNSLHCFHDPEAW*RCPPQS
Trigger: GCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATC...GTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
3UTR-3UTR GCA 90 bp GGCACGGTCTTCAGTTCACTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCGTCAGTCCTTGCTCGTaGCACCCACAGGCTGAGGGG +
Preference number: 2 (lower is better)
Translates to: GTVFSSLLDQILQKENNSVSPCS*HPQAEG
Trigger: CCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGAC...GGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAGTGAACTGAAGACCGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR GCA 90 bp CTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGCAGGAACAGGGACCTaGCTGGGTTCACAGCCTTAT +
Preference number: 2 (lower is better)
Translates to: LSPLLPRRLLKIQKLGDDAGTGT*LGSQPY
Trigger: ATAAGGCTGTGAACCCAGGCAGGTCCCTGTTCCTGC...ATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGAGGGGGAGAGGACATaGTTGGAGCTTTTGATATAC +
Preference number: 2 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQEGERT*LELLIY
Trigger: GTATATCAAAAGCTCCAACCATGTCCTCTCCCCCTC...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
3UTR-3UTR CCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGAGGATGGCTCTCCTGTaGCTGCTGTTTTCTATGGTA +
Preference number: 2 (lower is better)
Translates to: KQTILPVRMSVLARATHRRMALL*LLFSMV
Trigger: TACCATAGAAAACAGCAGCCACAGGAGAGCCATCCT...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR TCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGCATGGTTGGAGCTTTTaGTATACAAAGCAGCACCTT +
Preference number: 2 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMHGWSF*YTKQHL
Trigger: AAGGTGCTGCTTTGTATATCAAAAGCTCCAACCATG...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CCA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTAGTCTTGCCAGCCGTTaGGGACTGAGCCTCCTAGTC +
Preference number: 2 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGSLASR*GLSLLV
Trigger: GACTAGGAGGCTCAGTCCCCAACGGCTGGCAAGACT...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CCA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTGGGAGGGGACTGATGTaGCACCCTTCTGATGTCACC +
Preference number: 2 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGGRGLM*HPSDVT
Trigger: GGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCC...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGGGCTGCTGTTTTCTATaGTATAGGGCGTCTTGGAAA +
Preference number: 2 (lower is better)
Translates to: KQTILPVRMSVLARATHRGCCFL*YRASWK
Trigger: TTTCCAAGACGCCCTATACCATAGAAAACAGCAGCC...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR CAA 90 bp GGCAGTGCCAGTCACAACACCTGGGTTTCCAGCCGCCGGAGTTCCTaGACCACAAGATCAATGTTAATAATTGGGTTAAAGTACAGGGCC +
Preference number: 2 (lower is better)
Translates to: GSASHNTWVSSRRSS*TTRSMLIIGLKYRA
Trigger: GGCCCTGTACTTTAACCCAATTATTAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCTGGAAACCCAGGTGTTGTGACTGGCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR GCA 90 bp ATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTCGCAGGAACAGGGACCTaGCTGGGTTCACAGCCTTAT +
Preference number: 2 (lower is better)
Translates to: ISWYGRKEYLTRNSLHCFAGTGT*LGSQPY
Trigger: ATAAGGCTGTGAACCCAGGCAGGTCCCTGTTCCTGC...GAAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR TCA 90 bp ACAATTCTGAATAACATGAAGGCCACTAAATCTAATGGGAACTGCCCGACATCCGGTTGGGGAGGGGACTaGTGTGGCACCCTTCTGATG +
Preference number: 2 (lower is better)
Translates to: TILNNMKATKSNGNCPTSGWGGD*CGTLLM
Trigger: CATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACC...GGATGTCGGGCAGTTCCCATTAGATTTAGTGGCCTTCATGTTATTCAGAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR TCA 90 bp ACCTGGGTTTCCAGCCGCCGGAGTTCCTTGACCACAAGATCAATGTTAATAATTTGGCTCCACATCCTCTaGGGCACGGTCTTCAGTTCA +
Preference number: 2 (lower is better)
Translates to: TWVSSRRSSLTTRSMLIIWLHIL*GTVFSS
Trigger: TGAACTGAAGACCGTGCCTCAGAGGATGTGGAGCCA...AATTATTAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCTGGAAACCCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR GCA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTAGACAATCCTCCCTGTaGGGATGTCAGTCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGRQSSL*GCQSLL
Trigger: GAGCAAGGACTGACATCCGCACAGGGAGGATTGTCT...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CCA 90 bp GCAATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCGAACAGGGACCTGCCTaGGTTCACAGCCTTATATTC +
Preference number: 2 (lower is better)
Translates to: AISWYGRKEYLTRNSLHCEQGPA*VHSLIF
Trigger: GAATATAAGGCTGTGAACCCAGGCAGGTCCCTGTTC...GCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR TCA 90 bp ACAATTCTGAATAACATGAAGGCCACTAAATCTAATGGGAACTGCCCGACATCCCCTGGTCTCAGGCTCTaGGATCCGGATCCTCTGTCA +
Preference number: 2 (lower is better)
Translates to: TILNNMKATKSNGNCPTSPGLRL*DPDPLS
Trigger: TGACAGAGGATCCGGATCTCAGAGCCTGAGACCAGG...GGATGTCGGGCAGTTCCCATTAGATTTAGTGGCCTTCATGTTATTCAGAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR TCA 90 bp TGTCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTAGAAGGAAGGAGTATTTaGCCAGGAACTCTCTCCACT +
Preference number: 2 (lower is better)
Translates to: CPVMDLQPVPSKLSNQLVEGRSI*PGTLST
Trigger: AGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTC...TACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
3UTR-3UTR GCA 90 bp GCAATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTGGCTCTCCTGTGGCTaGTGTTTTCTATGGTATAGG +
Preference number: 2 (lower is better)
Translates to: AISWYGRKEYLTRNSLHCWLSCG*CFLWYR
Trigger: CCTATACCATAGAAAACAGCAGCCACAGGAGAGCCA...GCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR GCA 90 bp ACAATTCTGAATAACATGAAGGCCACTAAATCTAATGGGAACTGCCCGACATCCAGGAAGTCCGCTCCCTaGCTCACCCCTCTTAAGCAT +
Preference number: 2 (lower is better)
Translates to: TILNNMKATKSNGNCPTSRKSAP*LTPLKH
Trigger: ATGCTTAAGAGGGGTGAGGCAGGGAGCGGACTTCCT...GGATGTCGGGCAGTTCCCATTAGATTTAGTGGCCTTCATGTTATTCAGAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR GCA 90 bp GATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACATCTCACACCTGCAAATCTAATGGGAACTaGCCGACATCCCTCTCAATC +
Preference number: 2 (lower is better)
Translates to: DVGLFLQGLSSKMTSHTCKSNGN*PTSLSI
Trigger: GATTGAGAGGGATGTCGGGCAGTTCCCATTAGATTT...GCAGGTGTGAGATGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR CCA 90 bp ATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTCAGGATGGCTCTCCTGTaGCTGCTGTTTTCTATGGTA +
Preference number: 2 (lower is better)
Translates to: ISWYGRKEYLTRNSLHCFRMALL*LLFSMV
Trigger: TACCATAGAAAACAGCAGCCACAGGAGAGCCATCCT...GAAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CCA 90 bp AATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTGAACAGGGACCTGCCTaGGTTCACAGCCTTATATTC +
Preference number: 2 (lower is better)
Translates to: NQLVWKEGVFDQELSPLLEQGPA*VHSLIF
Trigger: GAATATAAGGCTGTGAACCCAGGCAGGTCCCTGTTC...AAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR TCA 90 bp AGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTTTTGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: SDYKSNHHSRLKLNPLSFDVSGT*RVSAWA
Trigger: TGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTC...AAAACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR TCA 90 bp AATAATTGGGTTAAAGTACAGGGCCCAGTAAAACAAACAGTTGCAAACAAACTGGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACA +
Preference number: 2 (lower is better)
Translates to: NNWVKVQGPVKQTVANKLAWGSS*GRIAGT
Trigger: TGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGC...CAGTTTGTTTGCAACTGTTTGTTTTACTGGGCCCTGTACTTTAACCCAATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR GCA 90 bp TTCAGTTCACTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCAGAACTGAGAGGAAGTCCGCTCCCTaGCTCACCCCTCTTAAGCAT +
Preference number: 2 (lower is better)
Translates to: FSSLLDQILQKENNSRTERKSAP*LTPLKH
Trigger: ATGCTTAAGAGGGGTGAGGCAGGGAGCGGACTTCCT...CTCAGTTCTGGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAGTGAACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CCA 90 bp ACCTGGGTTTCCAGCCGCCGGAGTTCCTTGACCACAAGATCAATGTTAATAATTGAGGGGGAGAGGACATaGTTGGAGCTTTTGATATAC +
Preference number: 2 (lower is better)
Translates to: TWVSSRRSSLTTRSMLIIEGERT*LELLIY
Trigger: GTATATCAAAAGCTCCAACCATGTCCTCTCCCCCTC...AATTATTAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCTGGAAACCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR TCA 90 bp ATTCTCCAAAAGGAGAATAATTCCAGAACTGAGAGTAACATAGCATTGATGATGGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACA +
Preference number: 2 (lower is better)
Translates to: ILQKENNSRTESNIALMMAWGSS*GRIAGT
Trigger: TGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGC...CATCATCAATGCTATGTTACTCTCAGTTCTGGAATTATTCTCCTTTTGGAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR GCA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGCTCGGCCTCCCAAAGTaGTGGGATCCAGGTGTGAGC +
Preference number: 2 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVLGLPK*WDPGVS
Trigger: GCTCACACCTGGATCCCAGCACTTTGGGAGGCCGAG...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
3UTR-3UTR CCA 90 bp AGTTCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTTGTGAGGAAGGTGGCTaGGTGGGAAGGGCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: SSLHAIFITIALGVIIPACEEGG*VGRAAA
Trigger: AGCAGCAGCCCTTCCCACCCAGCCACCTTCCTCACA...AGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR CCA 90 bp AATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTGGCTGCTGTTTTCTATaGTATAGGGCGTCTTGGAAA +
Preference number: 2 (lower is better)
Translates to: NQLVWKEGVFDQELSPLLGCCFL*YRASWK
Trigger: TTTCCAAGACGCCCTATACCATAGAAAACAGCAGCC...AAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR TCA 90 bp AGTTCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTCCTGGTCTCAGGCTCTaGGATCCGGATCCTCTGTCA +
Preference number: 2 (lower is better)
Translates to: SSLHAIFITIALGVIIPAPGLRL*DPDPLS
Trigger: TGACAGAGGATCCGGATCTCAGAGCCTGAGACCAGG...AGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR GCA 90 bp AGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTTTTAGACAATCCTCCCTGTaGGGATGTCAGTCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: SDYKSNHHSRLKLNPLSFRQSSL*GCQSLL
Trigger: GAGCAAGGACTGACATCCGCACAGGGAGGATTGTCT...AAAACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR GCA 90 bp TCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTGTACTCACCCACCCAAAGTaGTGGGATTACAGGGGTGAG +
Preference number: 2 (lower is better)
Translates to: SLHAIFITIALGVIIPAVLTHPK*WDYRGE
Trigger: CTCACCCCTGTAATCCCAGCACTTTGGGTGGGTGAG...TACAGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR GCA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAAGGAGTCTTGCCTTGTTaGCTAGGCTGGAGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: TLFVNTLKTMDCALQTCEGVLPC*LGWSAV
Trigger: CACTGCACTCCAGCCTAGGCAACAAGGCAAGACTCC...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
3UTR-3UTR CCA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGGTGAGCCACCGCGCCTaGCCTGGATTATATCTCAAG +
Preference number: 2 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVVSHRA*PGLYLK
Trigger: CTTGAGATATAATCCAGGCCAGGCGCGGTGGCTCAC...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
3UTR-3UTR TCA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAACCTCTTGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: TLFVNTLKTMDCALQTCEPLGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCAAGAGG...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
3UTR-3UTR CCA 90 bp TCAGTTCACTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCAGAACTGAGATGGTATAGGGCGTCTTaGAAAATTCTTCCTCTGTCA +
Preference number: 2 (lower is better)
Translates to: SVHFSTRFSKRRIIPELRWYRAS*KILPLS
Trigger: TGACAGAGGAAGAATTTTCCAAGACGCCCTATACCA...TCTCAGTTCTGGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAGTGAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CCA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAAGTAACCTCCACCTCTTaGGTTCAAGTGATTCTCCTG +
Preference number: 2 (lower is better)
Translates to: TLFVNTLKTMDCALQTCEVTSTS*VQVILL
Trigger: CAGGAGAATCACTTGAACCCAAGAGGTGGAGGTTAC...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
3UTR CAA 90 bp ATACAAAGGGTTAATGAATGGTTCATGGAGTCACAAGATAATATTTaGGATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACA +
Preference number: 2 (lower is better)
Translates to: IQRVNEWFMESQDNI*DVGLFLQGLSSKMT
Trigger: TGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATCCAAAATATTATCTTGTGACTCCATGAACCATTCATTAACCCTTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR TCA 90 bp AGTTCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTCTGGGATTACAGGGGTaGGGTATCACCAAAACAATT +
Preference number: 2 (lower is better)
Translates to: SSLHAIFITIALGVIIPALGLQG*GITKTI
Trigger: AATTGTTTTGGTGATACCTCACCCCTGTAATCCCAG...AGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR TCA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGCTCTCTCTCTCTTTTTaGGATGGAGTCTTGCCTTGT +
Preference number: 2 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVLSLSF*DGVLPC
Trigger: ACAAGGCAAGACTCCATCTCAAAAAGAGAGAGAGAG...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
3UTR-3UTR TCA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAACTCTCTCTCTCTTTTTaGGATGGAGTCTTGCCTTGT +
Preference number: 2 (lower is better)
Translates to: TLFVNTLKTMDCALQTCELSLSF*DGVLPC
Trigger: ACAAGGCAAGACTCCATCTCAAAAAGAGAGAGAGAG...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
3UTR CAA 90 bp AGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTaGAGTTTTACTCTGAATCCTAGCAACTCTTCAATAAGACAGAAT +
Preference number: 2 (lower is better)
Translates to: SDYKSNHHSRLKLNP*SFTLNPSNSSIRQN
Trigger: ATTCTGTCTTATTGAAGAGTTGCTAGGATTCAGAGTAAAACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR TCA 90 bp AGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTTTTAACTCTCTATGCCTATaGCAGAATCTTATCCTTGTT +
Preference number: 2 (lower is better)
Translates to: SDYKSNHHSRLKLNPLSFNSLCL*QNLILV
Trigger: AACAAGGATAAGATTCTGTCATAGGCATAGAGAGTT...AAAACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR CAA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACTGCGGATGTCAGTCCTaGCTCGTGCCACCCACAGGC +
Preference number: 3 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHCGCQS*LVPPTG
Trigger: GCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCA...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR TCA 72 bp GGTACAGGTAGAGCAGACTCAGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACAGGGACCTGCCTGGGT +
Preference number: 3 (lower is better)
Translates to: GTGRADSAWGSS*GRIAGTGTCLG
Trigger: ACCCAGGCAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAGTCTGCTCTACCTGTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
3UTR GCA 72 bp GACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTaGCACCCACAGGCTGAGGGGGAGAGGACATGGTTG +
Preference number: 3 (lower is better)
Translates to: DNPPCADVSPCS*HPQAEGERTWL
Trigger: CAACCATGTCCTCTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
3UTR CCA 72 bp CCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTaGGGACTGAGCCTCCTAGTCCCTGTGAGGAAGGTG +
Preference number: 3 (lower is better)
Translates to: PCPLRTLSLASR*GLSLLVPVRKV
Trigger: CACCTTCCTCACAGGGACTAGGAGGCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CAA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGAGACGTCAGCGGGACTaGAAGAGTCTCAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMRRQRD*KSLSLG
Trigger: GCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTCT...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CAA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAAGACGTCAGCGGGACTaGAAGAGTCTCAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGRRQRD*KSLSLG
Trigger: GCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTCT...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CAA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGGAGTCTTGCCAGCCGTaGGGGACTGAGCCTCCTAGT +
Preference number: 3 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMESCQP*GTEPPS
Trigger: ACTAGGAGGCTCAGTCCCCAACGGCTGGCAAGACTC...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR GCA 72 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTaGTCGTGCCACCCACAGGCTGAGGGGGAGAGGACA +
Preference number: 3 (lower is better)
Translates to: QTDNPPCADVSP*SCHPQAEGERT
Trigger: TGTCCTCTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
3UTR-3UTR CAA 90 bp AGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGTCTTCAGACGTCAGCGGGACTaGAAGAGTCTCAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: RLLKIQKLGDDVLPRAVFRRQRD*KSLSLG
Trigger: GCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTCT...GAAGACAGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp AGCAGACTCAGCCTGGGGGAGCTCTTGAGGGCGTATAGCAGGAACAGGGACCTGTTCACGCCTAATGCTTaGACACGTTCTAGCTCCATG +
Preference number: 3 (lower is better)
Translates to: SRLSLGELLRAYSRNRDLFTPNA*TRSSSM
Trigger: CATGGAGCTAGAACGTGTCAAAGCATTAGGCGTGAA...CAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAGTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp ACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATGGAAGGAAGGAGAGCCTGGGGGAGCTCTaGAGGGCGTATAGCAGGAAC +
Preference number: 3 (lower is better)
Translates to: TSNQSQANSAISWYGRKESLGEL*RAYSRN
Trigger: GTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCT...CTCCTTCCTTCCATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp TGTCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTAAGACGTCAGCGGGACTaGAAGAGTCTCAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: CPVMDLQPVPSKLSNQLVRRQRD*KSLSLG
Trigger: GCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTCT...TACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCACATGGTTGGAGCTTTaGATATACAAAGCAGCACCT +
Preference number: 3 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSTWLEL*IYKAAP
Trigger: AGGTGCTGCTTTGTATATCAAAAGCTCCAACCATGT...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CAA 90 bp TCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATGAGCCTGGGGGAGCTCTaGAGGGCGTATAGCAGGAAC +
Preference number: 3 (lower is better)
Translates to: SSNGPPTSPKQTQQSAGMSLGEL*RAYSRN
Trigger: GTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCT...CATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
3UTR TCA 72 bp CCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCAGTGCCAGTCACAACA +
Preference number: 3 (lower is better)
Translates to: PLKHQSSDVSGT*RVSAWAVPVTT
Trigger: TGTTGTGACTGGCACTGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTAGACGTCAGCGGGACTaGAAGAGTCTCAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGRRQRD*KSLSLG
Trigger: GCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTCT...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CAA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGACATGGTTGGAGCTTTaGATATACAAAGCAGCACCT +
Preference number: 3 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLTWLEL*IYKAAP
Trigger: AGGTGCTGCTTTGTATATCAAAAGCTCCAACCATGT...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CAA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAGGGGAGAGGACATGGTaGGAGCTTTTGATATACAAA +
Preference number: 3 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGGERTW*ELLIYK
Trigger: TTTGTATATCAAAAGCTCCAACCATGTCCTCTCCCC...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CAA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGGGGGAGAGGACATGGTaGGAGCTTTTGATATACAAA +
Preference number: 3 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMGERTW*ELLIYK
Trigger: TTTGTATATCAAAAGCTCCAACCATGTCCTCTCCCC...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
3UTR-3UTR CAA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCGGGGAGAGGACATGGTaGGAGCTTTTGATATACAAA +
Preference number: 3 (lower is better)
Translates to: SAKQTILPVRMSVLARATGERTW*ELLIYK
Trigger: TTTGTATATCAAAAGCTCCAACCATGTCCTCTCCCC...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
3UTR-3UTR CAA 90 bp TCCAGAAATGGCTCCACATCCTCTGAGGCACGGTCTTCAGTTCACTTCTCGACCTTAAGATCCAGAAGCTaGGTGACGATGTCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: SRNGSTSSEARSSVHFSTLRSRS*VTMSSP
Trigger: TGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAA...GGTCGAGAAGTGAACTGAAGACCGTGCCTCAGAGGATGTGGAGCCATTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGACATGGTTGGAGCTTTaGATATACAAAGCAGCACCT +
Preference number: 3 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQTWLEL*IYKAAP
Trigger: AGGTGCTGCTTTGTATATCAAAAGCTCCAACCATGT...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
3UTR-3UTR CAA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGACATGGTTGGAGCTTTaGATATACAAAGCAGCACCT +
Preference number: 3 (lower is better)
Translates to: KQTILPVRMSVLARATHRTWLEL*IYKAAP
Trigger: AGGTGCTGCTTTGTATATCAAAAGCTCCAACCATGT...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
3UTR-3UTR CAA 90 bp TTCAGTTCACTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCAGAACTGAGTGCGGATGTCAGTCCTaGCTCGTGCCACCCACAGGC +
Preference number: 3 (lower is better)
Translates to: FSSLLDQILQKENNSRTECGCQS*LVPPTG
Trigger: GCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCA...CTCAGTTCTGGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAGTGAACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp TTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTCACGCCTAATGCTTaGACACGTTCTAGCTCCATG +
Preference number: 3 (lower is better)
Translates to: LTRNSLHCFHVGSLRSRSFTPNA*TRSSSM
Trigger: CATGGAGCTAGAACGTGTCAAAGCATTAGGCGTGAA...GCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp TCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATGTTAAGATCCAGAAGCTaGGTGACGATGTCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: SSNGPPTSPKQTQQSAGMLRSRS*VTMSSP
Trigger: TGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAA...CATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
3UTR GCA 72 bp GGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTaGTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTG +
Preference number: 3 (lower is better)
Translates to: GRKEYLTRNSLH*FHVGSLRSRSL
Trigger: CAAGCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
3UTR CCA 72 bp ACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTaGTATGGAAGGAAGGAGTATTTGACCAGGAACTCT +
Preference number: 3 (lower is better)
Translates to: TSNQSQANSAIS*YGRKEYLTRNS
Trigger: AGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp AGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTTTTTGCGGATGTCAGTCCTaGCTCGTGCCACCCACAGGC +
Preference number: 3 (lower is better)
Translates to: SDYKSNHHSRLKLNPLSFCGCQS*LVPPTG
Trigger: GCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCA...AAAACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR CAA 90 bp GGCACGGTCTTCAGTTCACTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCTTAAGATCCAGAAGCTaGGTGACGATGTCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: GTVFSSLLDQILQKENNSLRSRS*VTMSSP
Trigger: TGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAA...GGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAGTGAACTGAAGACCGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp ATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTCACATGGTTGGAGCTTTaGATATACAAAGCAGCACCT +
Preference number: 3 (lower is better)
Translates to: ISWYGRKEYLTRNSLHCFTWLEL*IYKAAP
Trigger: AGGTGCTGCTTTGTATATCAAAAGCTCCAACCATGT...GAAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp AAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGAACATGGTTGGAGCTTTaGATATACAAAGCAGCACCT +
Preference number: 3 (lower is better)
Translates to: KEYLTRNSLHCFHVGSLRTWLEL*IYKAAP
Trigger: AGGTGCTGCTTTGTATATCAAAAGCTCCAACCATGT...TCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp GATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACATCTCACACCTGCCTCAAACTGAATCCTTaGAGTTTTACTCTGAATCCT +
Preference number: 3 (lower is better)
Translates to: DVGLFLQGLSSKMTSHTCLKLNP*SFTLNP
Trigger: AGGATTCAGAGTAAAACTCAAAGGATTCAGTTTGAG...GCAGGTGTGAGATGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR GCA 72 bp CTGAATAACATGAAGGCCACTAAATCTAATGGGAACTaGCCGACATCCCTCTCAATCTCTCCATTCAGAGAA +
Preference number: 3 (lower is better)
Translates to: LNNMKATKSNGN*PTSLSISPFRE
Trigger: TTCTCTGAATGGAGAGATTGAGAGGGATGTCGGGCAGTTCCCATTAGATTTAGTGGCCTTCATGTTATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR CAA 90 bp TCAGTTCACTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCAGAACTGAGAGGGGAGAGGACATGGTaGGAGCTTTTGATATACAAA +
Preference number: 3 (lower is better)
Translates to: SVHFSTRFSKRRIIPELRGERTW*ELLIYK
Trigger: TTTGTATATCAAAAGCTCCAACCATGTCCTCTCCCC...TCTCAGTTCTGGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAGTGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGCAGTGGCATGATCTaGGCTCATTGTAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVCSGMI*AHCNLH
Trigger: GTGGAGGTTACAATGAGCCAAGATCATGCCACTGCA...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
3UTR-3UTR CAA 90 bp ATTCTCCAAAAGGAGAATAATTCCAGAACTGAGAGTAACATAGCATTGATGATGGGAAGGAAGGAGTATTaGACCAGGAACTCTCTCCAC +
Preference number: 3 (lower is better)
Translates to: ILQKENNSRTESNIALMMGRKEY*TRNSLH
Trigger: GTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCC...CATCATCAATGCTATGTTACTCTCAGTTCTGGAATTATTCTCCTTTTGGAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp ATTCTCCAAAAGGAGAATAATTCCAGAACTGAGAGTAACATAGCATTGATGATGGGGGAGAGGACATGGTaGGAGCTTTTGATATACAAA +
Preference number: 3 (lower is better)
Translates to: ILQKENNSRTESNIALMMGERTW*ELLIYK
Trigger: TTTGTATATCAAAAGCTCCAACCATGTCCTCTCCCC...CATCATCAATGCTATGTTACTCTCAGTTCTGGAATTATTCTCCTTTTGGAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
3UTR-3UTR CAA 90 bp TCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTGTAGGGGAGAGGACATGGTaGGAGCTTTTGATATACAAA +
Preference number: 3 (lower is better)
Translates to: SLHAIFITIALGVIIPAVGERTW*ELLIYK
Trigger: TTTGTATATCAAAAGCTCCAACCATGTCCTCTCCCC...TACAGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR-3UTR CAA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAATCTCTCTCTCTCTTTTaGAGATGGAGTCTTGCCTTG +
Preference number: 3 (lower is better)
Translates to: TLFVNTLKTMDCALQTCESLSLF*RWSLAL
Trigger: CAAGGCAAGACTCCATCTCAAAAAGAGAGAGAGAGA...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
3UTR-3UTR CAA 90 bp TCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTGTATTACAAAACATTTCCTaGAACAAAACGACTATCCCG +
Preference number: 3 (lower is better)
Translates to: SLHAIFITIALGVIIPAVLQNIS*NKTTIP
Trigger: CGGGATAGTCGTTTTGTTCAAGGAAATGTTTTGTAA...TACAGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGTGTGAGGAAGGTGGCTaGGTGGGAAGGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGECEEGG*VGRAAA
Trigger: AGCAGCAGCCCTTCCCACCCAGCCACCTTCCTCACA...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGAGTAACAAGACAGAGTaGGGGAAGCGTGCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGESNKTE*GKRAPA
Trigger: GGCCGGGGCACGCTTCCCCCACTCTGTCTTGTTACT...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619034.2
CDS-3UTR TCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGGATCCAGAAGCTTGGTaGCGATGTCCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGEDPEAW*RCPPQS
Trigger: GCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATC...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGTCTCAGCCTGGGCAGTaGCAGTCACAACACCTGGGT +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGESQPGQ*QSQHLG
Trigger: ACCCAGGTGTTGTGACTGGCACTGCCCAGGCTGAGA...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGGGTGGGAAGGGCTGCTaGTGTGTCAGCCAAACAGAC +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGEGGKGC*CVSQTD
Trigger: GTCTGTTTGGCTGACACAGCAGCAGCCCTTCCCACC...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGCTTCCGCCGTCCATTTaGCCACAGCCTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGELPPSI*PQPCGP
Trigger: TGGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAG...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
CDS-3UTR TCA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSDVSGT*RVSAWA
Trigger: TGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTC...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGGCAGGAACAGGGACCTaGCTGGGTTCACAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGEAGTGT*LGSQPY
Trigger: ATAAGGCTGTGAACCCAGGCAGGTCCCTGTTCCTGC...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCGCCAGTCACAACACCTaGGTTTCCAGCCGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSASHNT*VSSRRS
Trigger: ACTCCGGCGGCTGGAAACCCAGGTGTTGTGACTGGC...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCTGTGAGGAAGGTGGCTaGGTGGGAAGGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSCEEGG*VGRAAA
Trigger: AGCAGCAGCCCTTCCCACCCAGCCACCTTCCTCACA...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCGATCCAGAAGCTTGGTaGCGATGTCCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSDPEAW*RCPPQS
Trigger: GCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATC...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGGGTTGGGGAGGGGACTaGTGTGGCACCCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLGWGGD*CGTLLM
Trigger: CATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACC...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCTCTCAGCCTGGGCAGTaGCAGTCACAACACCTGGGT +
Preference number: 4 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSSQPGQ*QSQHLG
Trigger: ACCCAGGTGTTGTGACTGGCACTGCCCAGGCTGAGA...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAGTCAGTCCTTGCTCGTaGCACCCACAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGVSPCS*HPQAEG
Trigger: CCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGAC...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGGTCAGTCCTTGCTCGTaGCACCCACAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMVSPCS*HPQAEG
Trigger: CCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGAC...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp AGCAGACTCAGCCTGGGGGAGCTCTTGAGGGCGTATAGCAGGAACAGGGACCTGGCGGATGTCAGTCCTTaGTCGTGCCACCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: SRLSLGELLRAYSRNRDLADVSP*SCHPQA
Trigger: AGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGC...CAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGTGTGAGGAAGGTGGCTaGGTGGGAAGGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLCEEGG*VGRAAA
Trigger: AGCAGCAGCCCTTCCCACCCAGCCACCTTCCTCACA...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGCACGTTCTAGCTCCATaGGGATGGCTCTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLHVLAP*GWLSCG
Trigger: GCCACAGGAGAGCCATCCTCATGGAGCTAGAACGTG...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CCGCTCCCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PLPASPLLSIKAQTSAGLAWGSS*GRIAGT
Trigger: TGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGC...AAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGGGAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGGTTCAGATTCCCTGCTaGTCCAGTGATAGACGAGCA +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGEVQIPC*SSDRRA
Trigger: TGCTCGTCTATCACTGGAGCAGCAGGGAATCTGAAC...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
CDS-3UTR GCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGTCAGTCCTTGCTCGTaGCACCCACAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQVSPCS*HPQAEG
Trigger: CCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGAC...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCTTGGCCACAGCCTTGTaGACCAGGAGGTCGTGTTCA +
Preference number: 4 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSLATAL*TRRSCS
Trigger: TGAACACGACCTCCTGGTCCACAAGGCTGTGGCCAA...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGTCTTGCCAGCCGTTaGGGACTGAGCCTCCTAGTC +
Preference number: 4 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLSLASR*GLSLLV
Trigger: GACTAGGAGGCTCAGTCCCCAACGGCTGGCAAGACT...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGCAGGCTGAAGTGCAGTaGTGCAGTCTCCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMQAEVQ*CSLPPC
Trigger: GCAGGGAGGGAGACTGCACCACTGCACTTCAGCCTG...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCGAGGGCCGGTGCTTTTaGGAGGTTCATCTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSEGRCF*EVHLSQ
Trigger: TTGAGAGAGATGAACCTCTCAAAAGCACCGGCCCTC...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGCCCCCTCCCATCTGCTaGTTCGCTCGGCCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQPPPIC*FARPVL
Trigger: TAACACAGGCCGAGCGAATCAGCAGATGGGAGGGGG...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACCACGTTCTAGCTCCATaGGGATGGCTCTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHHVLAP*GWLSCG
Trigger: GCCACAGGAGAGCCATCCTCATGGAGCTAGAACGTG...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGCACGTTCTAGCTCCATaGGGATGGCTCTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMHVLAP*GWLSCG
Trigger: GCCACAGGAGAGCCATCCTCATGGAGCTAGAACGTG...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRAWGSS*GRIAGT
Trigger: TGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGC...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQAWGSS*GRIAGT
Trigger: TGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGC...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGGATCCAGAAGCTTGGTaGCGATGTCCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMDPEAW*RCPPQS
Trigger: GCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATC...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGGAAGGAAGGAGTATTTaGCCAGGAACTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGEEGRSI*PGTLST
Trigger: AGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTC...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQDVSGT*RVSAWA
Trigger: TGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTC...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRDVSGT*RVSAWA
Trigger: TGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTC...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCGGTTGGGGAGGGGACTaGTGTGGCACCCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: SAKQTILPVRMSVLARATGWGGD*CGTLLM
Trigger: CATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACC...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACCCTGGTCTCAGGCTCTaGGATCCGGATCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHPGLRL*DPDPLS
Trigger: TGACAGAGGATCCGGATCTCAGAGCCTGAGACCAGG...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp CTCAGCCTGGGGGAGCTCTTGAGGGCGTATAGCAGGAACAGGGACCTGCCTGGGAGGAACTCTCTCCACTaGTTCCACGTAGGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: LSLGELLRAYSRNRDLPGRNSLH*FHVGSL
Trigger: TAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCT...CCCAGGCAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR GCA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCGCGGATGTCAGTCCTTaGTCGTGCCACCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: SAKQTILPVRMSVLARATADVSP*SCHPQA
Trigger: AGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGC...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGGCTGAAGTGCAGTGGTaGAGTCTCCCTCCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMAEVQW*SLPPCN
Trigger: GTTGCAGGGAGGGAGACTGCACCACTGCACTTCAGC...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAGCTGAAGTGCAGTGGTaGAGTCTCCCTCCCTGCAAC +
Preference number: 4 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGAEVQW*SLPPCN
Trigger: GTTGCAGGGAGGGAGACTGCACCACTGCACTTCAGC...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp CCGCTCCCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTTCACCCAGGCTGAAGTaGAGTGGTGCAGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLPASPLLSIKAQTSAGLSPRLK*SGAVSL
Trigger: GAGGGAGACTGCACCACTGCACTTCAGCCTGGGTGA...AAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGGGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGATCACCCAGGCTGAAGTaGAGTGGTGCAGTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGSPRLK*SGAVSL
Trigger: GAGGGAGACTGCACCACTGCACTTCAGCCTGGGTGA...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGATGACATCTCACACCTaGTGTGTTCACACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGEMTSHT*CVHTGR
Trigger: CCTTCCAGTGTGAACACAGCAGGTGTGAGATGTCAT...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp CCGCTCCCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTCTTCCGCCGTCCATTTaGCCACAGCCTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: PLPASPLLSIKAQTSAGLLPPSI*PQPCGP
Trigger: TGGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAG...AAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGGGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
CDS-3UTR CCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGGCCAGTCACAACACCTaGGTTTCCAGCCGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRASHNT*VSSRRS
Trigger: ACTCCGGCGGCTGGAAACCCAGGTGTTGTGACTGGC...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCTGTGAGGAAGGTGGCTaGGTGGGAAGGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SAKQTILPVRMSVLARATCEEGG*VGRAAA
Trigger: AGCAGCAGCCCTTCCCACCCAGCCACCTTCCTCACA...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGAGTCTTGCCAGCCGTTaGGGACTGAGCCTCCTAGTC +
Preference number: 4 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMSLASR*GLSLLV
Trigger: GACTAGGAGGCTCAGTCCCCAACGGCTGGCAAGACT...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAGGGAGGGGACTGATGTaGCACCCTTCTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGGRGLM*HPSDVT
Trigger: GGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCC...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGGGGAGGGGACTGATGTaGCACCCTTCTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMGRGLM*HPSDVT
Trigger: GGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCC...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCACGTTCTAGCTCCATaGGGATGGCTCTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRHVLAP*GWLSCG
Trigger: GCCACAGGAGAGCCATCCTCATGGAGCTAGAACGTG...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGGATCCAGAAGCTTGGTaGCGATGTCCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRDPEAW*RCPPQS
Trigger: GCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATC...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCTCCACATCCTCTaGGGCACGGTCTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMWLHIL*GTVFSS
Trigger: TGAACTGAAGACCGTGCCTCAGAGGATGTGGAGCCA...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGCAGTTGCAAACAAACTaGGGGATGAGGGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLQLQTN*GMRGQN
Trigger: GTTCTGGCCCCTCATCCCTCAGTTTGTTTGCAACTG...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PASPLLSIKAQTSAGLEEDVSGT*RVSAWA
Trigger: TGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTC...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGGATGTGGCACCCTTCTaGTGTCACCCACACCATGTC +
Preference number: 4 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMDVAPF*CHPHHV
Trigger: GACATGGTGTGGGTGACATCAGAAGGGTGCCACATC...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAGATGTGGCACCCTTCTaGTGTCACCCACACCATGTC +
Preference number: 4 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGDVAPF*CHPHHV
Trigger: GACATGGTGTGGGTGACATCAGAAGGGTGCCACATC...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGGATGTGGCACCCTTCTaGTGTCACCCACACCATGTC +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMDVAPF*CHPHHV
Trigger: GACATGGTGTGGGTGACATCAGAAGGGTGCCACATC...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGCCTGGTCTCAGGCTCTaGGATCCGGATCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQPGLRL*DPDPLS
Trigger: TGACAGAGGATCCGGATCTCAGAGCCTGAGACCAGG...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTTCCCTGTAAAGAGATaGCCAAGGGCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMFPVKR*PRAQLL
Trigger: GAGCAGCTGGGCCCTTGGGCATCTCTTTACAGGGAA...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp CTCAGCCTGGGGGAGCTCTTGAGGGCGTATAGCAGGAACAGGGACCTGCCTGGGTGGCTCTCCTGTGGCTaGTGTTTTCTATGGTATAGG +
Preference number: 4 (lower is better)
Translates to: LSLGELLRAYSRNRDLPGWLSCG*CFLWYR
Trigger: CCTATACCATAGAAAACAGCAGCCACAGGAGAGCCA...CCCAGGCAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR GCA 90 bp CCGCTCCCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGCAGGAACAGGGACCTaGCTGGGTTCACAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: PLPASPLLSIKAQTSAGLAGTGT*LGSQPY
Trigger: ATAAGGCTGTGAACCCAGGCAGGTCCCTGTTCCTGC...AAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGGGAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACGCAGGAACAGGGACCTaGCTGGGTTCACAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHAGTGT*LGSQPY
Trigger: ATAAGGCTGTGAACCCAGGCAGGTCCCTGTTCCTGC...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGTCTCAGCCTGGGCAGTaGCAGTCACAACACCTGGGT +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQSQPGQ*QSQHLG
Trigger: ACCCAGGTGTTGTGACTGGCACTGCCCAGGCTGAGA...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGGGTGGGAAGGGCTGCTaGTGTGTCAGCCAAACAGAC +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRGGKGC*CVSQTD
Trigger: GTCTGTTTGGCTGACACAGCAGCAGCCCTTCCCACC...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCGGTGGGAAGGGCTGCTaGTGTGTCAGCCAAACAGAC +
Preference number: 4 (lower is better)
Translates to: SAKQTILPVRMSVLARATGGKGC*CVSQTD
Trigger: GTCTGTTTGGCTGACACAGCAGCAGCCCTTCCCACC...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGGTGGGAAGGGCTGCTaGTGTGTCAGCCAAACAGAC +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQGGKGC*CVSQTD
Trigger: GTCTGTTTGGCTGACACAGCAGCAGCCCTTCCCACC...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp CCGCTCCCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTTTGGCCACAGCCTTGTaGACCAGGAGGTCGTGTTCA +
Preference number: 4 (lower is better)
Translates to: PLPASPLLSIKAQTSAGLLATAL*TRRSCS
Trigger: TGAACACGACCTCCTGGTCCACAAGGCTGTGGCCAA...AAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGGGAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
CDS-3UTR CCA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACTTGGCCACAGCCTTGTaGACCAGGAGGTCGTGTTCA +
Preference number: 4 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHLATAL*TRRSCS
Trigger: TGAACACGACCTCCTGGTCCACAAGGCTGTGGCCAA...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp CTCAGCCTGGGGGAGCTCTTGAGGGCGTATAGCAGGAACAGGGACCTGCCTGGGAGGATGGCTCTCCTGTaGCTGCTGTTTTCTATGGTA +
Preference number: 4 (lower is better)
Translates to: LSLGELLRAYSRNRDLPGRMALL*LLFSMV
Trigger: TACCATAGAAAACAGCAGCCACAGGAGAGCCATCCT...CCCAGGCAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGGCCAGTCACAACACCTaGGTTTCCAGCCGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: PASPLLSIKAQTSAGLEEASHNT*VSSRRS
Trigger: ACTCCGGCGGCTGGAAACCCAGGTGTTGTGACTGGC...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCGGGAGGGGACTGATGTaGCACCCTTCTGATGTCACC +
Preference number: 4 (lower is better)
Translates to: SAKQTILPVRMSVLARATGRGLM*HPSDVT
Trigger: GGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCC...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAGCAACCTCCGCCTCCTaGGTTCAGGCGATTTCCAAT +
Preference number: 4 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGATSAS*VQAISN
Trigger: ATTGGAAATCGCCTGAACCCAGGAGGCGGAGGTTGC...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR CAA 72 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTaGGGGAGGGGACTGATGTGGCACCCTTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLR*GRGLMWHPSDV
Trigger: GACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCTCACTAACAGAAATCTaGGGGCCGGTGCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSSLTEI*GPVLLR
Trigger: TCTCAAAAGCACCGGCCCTCAGATTTCTGTTAGTGA...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGCATAAAGCAAGGCAGTaGCGGCAGAAGCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQHKARQ*RQKLCP
Trigger: TGGGCACAGCTTCTGCCGTCACTGCCTTGCTTTATG...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCATAAAGCAAGGCAGTaGCGGCAGAAGCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRHKARQ*RQKLCP
Trigger: TGGGCACAGCTTCTGCCGTCACTGCCTTGCTTTATG...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CAGCCTGGGCAGTGCCAGTCACAACACCTGGGTTTCCAGCCGCCGGAGTTCCTTGAAGGAAGGAGTATTTaGCCAGGAACTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: QPGQCQSQHLGFQPPEFLEGRSI*PGTLST
Trigger: AGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTC...AAGGAACTCCGGCGGCTGGAAACCCAGGTGTTGTGACTGGCACTGCCCAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGTGGCTCCACATCCTCTaGGGCACGGTCTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRWLHIL*GTVFSS
Trigger: TGAACTGAAGACCGTGCCTCAGAGGATGTGGAGCCA...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCTGGCTCCACATCCTCTaGGGCACGGTCTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SAKQTILPVRMSVLARATWLHIL*GTVFSS
Trigger: TGAACTGAAGACCGTGCCTCAGAGGATGTGGAGCCA...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGAAACAAACTGAGGGATaGGGGGCCAGAACATGGCCA +
Preference number: 4 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMKQTEG*GARTWP
Trigger: TGGCCATGTTCTGGCCCCTCATCCCTCAGTTTGTTT...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAAAACAAACTGAGGGATaGGGGGCCAGAACATGGCCA +
Preference number: 4 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGKQTEG*GARTWP
Trigger: TGGCCATGTTCTGGCCCCTCATCCCTCAGTTTGTTT...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGCGTGTTCAGATTCCCTaGTGCTCCAGTGATAGACGA +
Preference number: 4 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLRVQIP*CSSDRR
Trigger: TCGTCTATCACTGGAGCAGCAGGGAATCTGAACACG...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGGAACTCTCTCCACTaGTTCCACGTAGGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLRNSLH*FHVGSL
Trigger: TAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCT...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCAGGAAGTCCGCTCCCTaGCTCACCCCTCTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: SAKQTILPVRMSVLARATRKSAP*LTPLKH
Trigger: ATGCTTAAGAGGGGTGAGGCAGGGAGCGGACTTCCT...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGAGGAAGTCCGCTCCCTaGCTCACCCCTCTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQRKSAP*LTPLKH
Trigger: ATGCTTAAGAGGGGTGAGGCAGGGAGCGGACTTCCT...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGAGACAATCCTCCCTGTaGGGATGTCAGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMRQSSL*GCQSLL
Trigger: GAGCAAGGACTGACATCCGCACAGGGAGGATTGTCT...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp GATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACATCTCACACCTGCAGAGTGGGGGAAGCGTaGCCCGGCCCCGTGACCATA +
Preference number: 4 (lower is better)
Translates to: DVGLFLQGLSSKMTSHTCRVGEA*PGPVTI
Trigger: TATGGTCACGGGGCCGGGGCACGCTTCCCCCACTCT...GCAGGTGTGAGATGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619034.2
CDS-3UTR CCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGAGCAATCAGCTGGTATaGAAGGAAGGAGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGESNQLV*KEGVFD
Trigger: GTCAAATACTCCTTCCTTCCATACCAGCTGATTGCT...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp GTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGTCTGCCAGTCACAACACCTaGGTTTCCAGCCGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: VGSLRSRSLVTMSSPELSASHNT*VSSRRS
Trigger: ACTCCGGCGGCTGGAAACCCAGGTGTTGTGACTGGC...AGACAGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCGCAACCTCCGCCTCCTaGGTTCAGGCGATTTCCAAT +
Preference number: 4 (lower is better)
Translates to: SAKQTILPVRMSVLARATATSAS*VQAISN
Trigger: ATTGGAAATCGCCTGAACCCAGGAGGCGGAGGTTGC...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGCTGCTGTGTTCACACTaGAAGGAAATAAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGELLCSH*KEIKGH
Trigger: ATGGCCTTTTATTTCCTTCCAGTGTGAACACAGCAG...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGCATAAAGCAAGGCAGTaGCGGCAGAAGCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PASPLLSIKAQTSAGLEEHKARQ*RQKLCP
Trigger: TGGGCACAGCTTCTGCCGTCACTGCCTTGCTTTATG...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp AGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGTCTTCCACGTTCTAGCTCCATaGGGATGGCTCTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RLLKIQKLGDDVLPRAVFHVLAP*GWLSCG
Trigger: GCCACAGGAGAGCCATCCTCATGGAGCTAGAACGTG...GAAGACAGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp AACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: NSLHCFHVGSLRSRSLVTAWGSS*GRIAGT
Trigger: TGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGC...CGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGGATGATGAGAAACCGTaGTGTCCAGTAATGGACCTC +
Preference number: 4 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLDDEKP*CPVMDL
Trigger: GAGGTCCATTACTGGACATCACGGTTTCTCATCATC...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGAAACAAACTGAGGGATaGGGGGCCAGAACATGGCCA +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQKQTEG*GARTWP
Trigger: TGGCCATGTTCTGGCCCCTCATCCCTCAGTTTGTTT...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGCAGTTGCAAACAAACTaGGGGATGAGGGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQQLQTN*GMRGQN
Trigger: GTTCTGGCCCCTCATCCCTCAGTTTGTTTGCAACTG...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCGGTTGGGGAGGGGACTaGTGTGGCACCCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTGWGGD*CGTLLM
Trigger: CATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACC...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGAGGAACTCTCTCCACTaGTTCCACGTAGGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMRNSLH*FHVGSL
Trigger: TAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCT...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGAGGAAGTCCGCTCCCTaGCTCACCCCTCTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: PASPLLSIKAQTSAGLEERKSAP*LTPLKH
Trigger: ATGCTTAAGAGGGGTGAGGCAGGGAGCGGACTTCCT...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp GCAATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCGTCAGTCCTTGCTCGTaGCACCCACAGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: AISWYGRKEYLTRNSLHCVSPCS*HPQAEG
Trigger: CCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGAC...GCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR GCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCGCGGATGTCAGTCCTTaGTCGTGCCACCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTADVSP*SCHPQA
Trigger: AGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGC...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGAGACAATCCTCCCTGTaGGGATGTCAGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQRQSSL*GCQSLL
Trigger: GAGCAAGGACTGACATCCGCACAGGGAGGATTGTCT...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGAGACAATCCTCCCTGTaGGGATGTCAGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRRQSSL*GCQSLL
Trigger: GAGCAAGGACTGACATCCGCACAGGGAGGATTGTCT...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp TTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCGCAGGAACAGGGACCTaGCTGGGTTCACAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LTRNSLHCFHVGSLRSRSAGTGT*LGSQPE
Trigger: CTCAGGCTGTGAACCCAGGCAGGTCCCTGTTCCTGC...GCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563313.5
ENST00000631407.1
CDS-3UTR CCA 90 bp AGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGTCTTCCTTCCGCCGTCCATTTaGCCACAGCCTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: RLLKIQKLGDDVLPRAVFLPPSI*PQPCGP
Trigger: TGGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAG...GAAGACAGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCGGCTGCTGTTTTCTATaGTATAGGGCGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSGCCFL*YRASWK
Trigger: TTTCCAAGACGCCCTATACCATAGAAAACAGCAGCC...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp CCGCTCCCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAACAGGGACCTGCCTaGGTTCACAGCCTTATATTC +
Preference number: 4 (lower is better)
Translates to: PLPASPLLSIKAQTSAGLEQGPA*VHSLIF
Trigger: GAATATAAGGCTGTGAACCCAGGCAGGTCCCTGTTC...AAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGGGAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp CTCAGCCTGGGGGAGCTCTTGAGGGCGTATAGCAGGAACAGGGACCTGCCTGGGAGCAATCAGCTGGTATaGAAGGAAGGAGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: LSLGELLRAYSRNRDLPGSNQLV*KEGVFD
Trigger: GTCAAATACTCCTTCCTTCCATACCAGCTGATTGCT...CCCAGGCAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CCA 90 bp AACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGGCCAGTCACAACACCTaGGTTTCCAGCCGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: NSLHCFHVGSLRSRSLVTASHNT*VSSRRS
Trigger: ACTCCGGCGGCTGGAAACCCAGGTGTTGTGACTGGC...CGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp AGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGTCTTCCATAAAGCAAGGCAGTaGCGGCAGAAGCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RLLKIQKLGDDVLPRAVFHKARQ*RQKLCP
Trigger: TGGGCACAGCTTCTGCCGTCACTGCCTTGCTTTATG...GAAGACAGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp GATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACATCTCACACCTGCCCCCCTCCCATCTGCTaGTTCGCTCGGCCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: DVGLFLQGLSSKMTSHTCPPPIC*FARPVL
Trigger: TAACACAGGCCGAGCGAATCAGCAGATGGGAGGGGG...GCAGGTGTGAGATGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp TCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATGGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: SSNGPPTSPKQTQQSAGMAWGSS*GRIAGT
Trigger: TGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGC...CATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp TTTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: FDQELSPLLPRRLLKIQKAWGSS*GRIAGT
Trigger: TGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGC...CTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp CTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGATCCAGAAGCTTGGTaGCGATGTCCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LSPLLPRRLLKIQKLGDDDPEAW*RCPPQS
Trigger: GCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATC...ATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp AAGGTAGGAAGGTGTCGGTGTAGTCAAACAGGTACAGGTAGAGCAGACTCAGCCGATCCAGAAGCTTGGTaGCGATGTCCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KVGRCRCSQTGTGRADSADPEAW*RCPPQS
Trigger: GCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATC...GGCTGAGTCTGCTCTACCTGTACCTGTTTGACTACACCGACACCTTCCTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACGAAGGAAGGAGTATTTaGCCAGGAACTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHEGRSI*PGTLST
Trigger: AGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTC...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CCGCTCCCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGGAAGGAGTATTTaGCCAGGAACTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: PLPASPLLSIKAQTSAGLEGRSI*PGTLST
Trigger: AGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTC...AAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGGGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAGATGATGAGAAACCGTaGTGTCCAGTAATGGACCTC +
Preference number: 4 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGDDEKP*CPVMDL
Trigger: GAGGTCCATTACTGGACATCACGGTTTCTCATCATC...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGGATGATGAGAAACCGTaGTGTCCAGTAATGGACCTC +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMDDEKP*CPVMDL
Trigger: GAGGTCCATTACTGGACATCACGGTTTCTCATCATC...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp AGCAGACTCAGCCTGGGGGAGCTCTTGAGGGCGTATAGCAGGAACAGGGACCTGAAAAAGCCCCTGCGTTaGTACTTTCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: SRLSLGELLRAYSRNRDLKKPLR*YFPEMA
Trigger: AGCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTT...CAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAGTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGAAACAAACTGAGGGATaGGGGGCCAGAACATGGCCA +
Preference number: 4 (lower is better)
Translates to: PASPLLSIKAQTSAGLEEKQTEG*GARTWP
Trigger: TGGCCATGTTCTGGCCCCTCATCCCTCAGTTTGTTT...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGCAGTTGCAAACAAACTaGGGGATGAGGGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PASPLLSIKAQTSAGLEEQLQTN*GMRGQN
Trigger: GTTCTGGCCCCTCATCCCTCAGTTTGTTTGCAACTG...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGAACTCTCTATGCCTATaGCAGAATCTTATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGENSLCL*QNLILV
Trigger: AACAAGGATAAGATTCTGTCATAGGCATAGAGAGTT...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGTTCAGATTCCCTGCTaGTCCAGTGATAGACGAGCA +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQVQIPC*SSDRRA
Trigger: TGCTCGTCTATCACTGGAGCAGCAGGGAATCTGAAC...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
CDS-3UTR GCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCTCTCCTGTGGCTaGTGTTTTCTATGGTATAGG +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMWLSCG*CFLWYR
Trigger: CCTATACCATAGAAAACAGCAGCCACAGGAGAGCCA...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAAATCTAATGGGAACTaGCCGACATCCCTCTCAATC +
Preference number: 4 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLKSNGN*PTSLSI
Trigger: GATTGAGAGGGATGTCGGGCAGTTCCCATTAGATTT...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp ACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATGGAAGGAAGGAGCTTCCGCCGTCCATTTaGCCACAGCCTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: TSNQSQANSAISWYGRKELPPSI*PQPCGP
Trigger: TGGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAG...CTCCTTCCTTCCATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCTGGTATAGGGCGTCTTaGAAAATTCTTCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSWYRAS*KILPLS
Trigger: TGACAGAGGAAGAATTTTCCAAGACGCCCTATACCA...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGAGGATGGCTCTCCTGTaGCTGCTGTTTTCTATGGTA +
Preference number: 4 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMRMALL*LLFSMV
Trigger: TACCATAGAAAACAGCAGCCACAGGAGAGCCATCCT...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAAGGATGGCTCTCCTGTaGCTGCTGTTTTCTATGGTA +
Preference number: 4 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGRMALL*LLFSMV
Trigger: TACCATAGAAAACAGCAGCCACAGGAGAGCCATCCT...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGAACAGGGACCTGCCTaGGTTCACAGCCTTATATTC +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQEQGPA*VHSLIF
Trigger: GAATATAAGGCTGTGAACCCAGGCAGGTCCCTGTTC...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGGAACAGGGACCTGCCTaGGTTCACAGCCTTATATTC +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHREQGPA*VHSLIF
Trigger: GAATATAAGGCTGTGAACCCAGGCAGGTCCCTGTTC...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGGAGGGGGAGAGGACATaGTTGGAGCTTTTGATATAC +
Preference number: 4 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMEGERT*LELLIY
Trigger: GTATATCAAAAGCTCCAACCATGTCCTCTCCCCCTC...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAGAGGGGGAGAGGACATaGTTGGAGCTTTTGATATAC +
Preference number: 4 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGEGERT*LELLIY
Trigger: GTATATCAAAAGCTCCAACCATGTCCTCTCCCCCTC...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGCAAAGGGTTAATGAATaGTTCATGGAGTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: PPCADVSPCSCHPQAEGEQRVNE*FMESQD
Trigger: ATCTTGTGACTCCATGAACCATTCATTAACCCTTTG...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCCATAAAGCAAGGCAGTaGCGGCAGAAGCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTHKARQ*RQKLCP
Trigger: TGGGCACAGCTTCTGCCGTCACTGCCTTGCTTTATG...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp ACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATGGAAGGAAGGAGCATAAAGCAAGGCAGTaGCGGCAGAAGCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: TSNQSQANSAISWYGRKEHKARQ*RQKLCP
Trigger: TGGGCACAGCTTCTGCCGTCACTGCCTTGCTTTATG...CTCCTTCCTTCCATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp TCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATGGATCCAGAAGCTTGGTaGCGATGTCCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SSNGPPTSPKQTQQSAGMDPEAW*RCPPQS
Trigger: GCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATC...CATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCTGGCTCCACATCCTCTaGGGCACGGTCTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTWLHIL*GTVFSS
Trigger: TGAACTGAAGACCGTGCCTCAGAGGATGTGGAGCCA...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGAAAAAGCCCCTGCGTTaGTACTTTCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMKKPLR*YFPEMA
Trigger: AGCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTT...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CCGCTCCCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTAAAAAGCCCCTGCGTTaGTACTTTCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: PLPASPLLSIKAQTSAGLKKPLR*YFPEMA
Trigger: AGCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTT...AAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGGGAGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGCTGGGATTACAGGGGTaGGGTATCACCAAAACAATT +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMLGLQG*GITKTI
Trigger: AATTGTTTTGGTGATACCTCACCCCTGTAATCCCAG...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGGTTCAGATTCCCTGCTaGTCCAGTGATAGACGAGCA +
Preference number: 4 (lower is better)
Translates to: PASPLLSIKAQTSAGLEEVQIPC*SSDRRA
Trigger: TGCTCGTCTATCACTGGAGCAGCAGGGAATCTGAAC...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
CDS-3UTR GCA 90 bp GGTGTAGTCAAACAGGTACAGGTAGAGCAGACTCAGCCTGGGGGAGCTCTTGAGCGTGTTCAGATTCCCTaGTGCTCCAGTGATAGACGA +
Preference number: 4 (lower is better)
Translates to: GVVKQVQVEQTQPGGALERVQIP*CSSDRR
Trigger: TCGTCTATCACTGGAGCAGCAGGGAATCTGAACACG...CTCAAGAGCTCCCCCAGGCTGAGTCTGCTCTACCTGTACCTGTTTGACTACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR GCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCTTCCCTGTAAAGAGATaGCCAAGGGCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTFPVKR*PRAQLL
Trigger: GAGCAGCTGGGCCCTTGGGCATCTCTTTACAGGGAA...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
CDS-3UTR GCA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCTGGCTCTCCTGTGGCTaGTGTTTTCTATGGTATAGG +
Preference number: 4 (lower is better)
Translates to: SAKQTILPVRMSVLARATWLSCG*CFLWYR
Trigger: CCTATACCATAGAAAACAGCAGCCACAGGAGAGCCA...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCGCAGGAACAGGGACCTaGCTGGGTTCACAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTAGTGT*LGSQPY
Trigger: ATAAGGCTGTGAACCCAGGCAGGTCCCTGTTCCTGC...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp AAGGTAGGAAGGTGTCGGTGTAGTCAAACAGGTACAGGTAGAGCAGACTCAGCCGCAGGAACAGGGACCTaGCTGGGTTCACAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: KVGRCRCSQTGTGRADSAAGTGT*LGSQPY
Trigger: ATAAGGCTGTGAACCCAGGCAGGTCCCTGTTCCTGC...GGCTGAGTCTGCTCTACCTGTACCTGTTTGACTACACCGACACCTTCCTACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR GCA 90 bp AAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGAGCGGATGTCAGTCCTTaGTCGTGCCACCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: KEYLTRNSLHCFHVGSLRADVSP*SCHPQA
Trigger: AGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGC...TCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR GCA 90 bp ATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTCGCAGGAACAGGGACCTaGCTGGGTTCACAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ISWYGRKEYLTRNSLHCFAGTGT*LGSQPE
Trigger: CTCAGGCTGTGAACCCAGGCAGGTCCCTGTTCCTGC...GAAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563313.5
ENST00000631407.1
CDS-3UTR CCA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAGGCTGCTGTTTTCTATaGTATAGGGCGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGGCCFL*YRASWK
Trigger: TTTCCAAGACGCCCTATACCATAGAAAACAGCAGCC...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACGGCTGCTGTTTTCTATaGTATAGGGCGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHGCCFL*YRASWK
Trigger: TTTCCAAGACGCCCTATACCATAGAAAACAGCAGCC...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp TTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCGAGGGCCGGTGCTTTTaGGAGGTTCATCTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: LTRNSLHCFHVGSLRSRSEGRCF*EVHLSQ
Trigger: TTGAGAGAGATGAACCTCTCAAAAGCACCGGCCCTC...GCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGTCACTAACAGAAATCTaGGGGCCGGTGCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PASPLLSIKAQTSAGLEESLTEI*GPVLLR
Trigger: TCTCAAAAGCACCGGCCCTCAGATTTCTGTTAGTGA...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTCATTCCCATATTTCTaGAAGGCTGCAAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMSFPYF*KAARLW
Trigger: CCAAAGTCTTGCAGCCTTTCAGAAATATGGGAATGA...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp CCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGATGATGAGAAACCGTaGTGTCCAGTAATGGACCTC +
Preference number: 4 (lower is better)
Translates to: PRRLLKIQKLGDDVLPRADDEKP*CPVMDL
Trigger: GAGGTCCATTACTGGACATCACGGTTTCTCATCATC...AGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCCAGTTGCAAACAAACTaGGGGATGAGGGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTQLQTN*GMRGQN
Trigger: GTTCTGGCCCCTCATCCCTCAGTTTGTTTGCAACTG...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp GGCACGGTCTTCAGTTCACTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GTVFSSLLDQILQKENNSDVSGT*RVSAWA
Trigger: TGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTC...GGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAGTGAACTGAAGACCGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACCATGGTTGGAGCTTTTaGTATACAAAGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHHGWSF*YTKQHL
Trigger: AAGGTGCTGCTTTGTATATCAAAAGCTCCAACCATG...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGCATGGTTGGAGCTTTTaGTATACAAAGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMHGWSF*YTKQHL
Trigger: AAGGTGCTGCTTTGTATATCAAAAGCTCCAACCATG...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTCCTGGTCTCAGGCTCTaGGATCCGGATCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGPGLRL*DPDPLS
Trigger: TGACAGAGGATCCGGATCTCAGAGCCTGAGACCAGG...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGGGATTACAGGGGTaGGGTATCACCAAAACAATT +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRLGLQG*GITKTI
Trigger: AATTGTTTTGGTGATACCTCACCCCTGTAATCCCAG...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp GTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGTCTAGGAACTCTCTCCACTaGTTCCACGTAGGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: VGSLRSRSLVTMSSPELSRNSLH*FHVGSL
Trigger: TAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCT...AGACAGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR GCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCAGACAATCCTCCCTGTaGGGATGTCAGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTRQSSL*GCQSLL
Trigger: GAGCAAGGACTGACATCCGCACAGGGAGGATTGTCT...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAAGCAATCAGCTGGTATaGAAGGAAGGAGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGSNQLV*KEGVFD
Trigger: GTCAAATACTCCTTCCTTCCATACCAGCTGATTGCT...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp AGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTCCACGAGGGCCGGTGCTTTTaGGAGGTTCATCTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: SWYGRKEYLTRNSLHCFHEGRCF*EVHLSQ
Trigger: TTGAGAGAGATGAACCTCTCAAAAGCACCGGCCCTC...GTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp GGCACGGTCTTCAGTTCACTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCGATCCAGAAGCTTGGTaGCGATGTCCTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GTVFSSLLDQILQKENNSDPEAW*RCPPQS
Trigger: GCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATC...GGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAGTGAACTGAAGACCGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGAAAAAGCCCCTGCGTTaGTACTTTCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: PASPLLSIKAQTSAGLEEKKPLR*YFPEMA
Trigger: AGCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTT...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp GAGTATTTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAAACAAACTGAGGGATaGGGGGCCAGAACATGGCCA +
Preference number: 4 (lower is better)
Translates to: EYLTRNSLHCFHVGSLRSKQTEG*GARTWP
Trigger: TGGCCATGTTCTGGCCCCTCATCCCTCAGTTTGTTT...GGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp GCAATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCAAACAAACTGAGGGATaGGGGGCCAGAACATGGCCA +
Preference number: 4 (lower is better)
Translates to: AISWYGRKEYLTRNSLHCKQTEG*GARTWP
Trigger: TGGCCATGTTCTGGCCCCTCATCCCTCAGTTTGTTT...GCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCATGGTTGGAGCTTTTaGTATACAAAGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRHGWSF*YTKQHL
Trigger: AAGGTGCTGCTTTGTATATCAAAAGCTCCAACCATG...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp AGCAGACTCAGCCTGGGGGAGCTCTTGAGGGCGTATAGCAGGAACAGGGACCTGCTTCCCATTTTTCTCTaGATTCTGGACATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SRLSLGELLRAYSRNRDLLPIFL*ILDILF
Trigger: AAACAGAATGTCCAGAATGCAGAGAAAAATGGGAAG...CAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAGTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR GCA 90 bp ACTGCCCGACATCCCTCTCAATCTCTCCATTCAGAGAAAGGGATCCAGACCTTCCGTGTTCAGATTCCCTaGTGCTCCAGTGATAGACGA +
Preference number: 4 (lower is better)
Translates to: TARHPSQSLHSEKGIQTFRVQIP*CSSDRR
Trigger: TCGTCTATCACTGGAGCAGCAGGGAATCTGAACACG...GAAGGTCTGGATCCCTTTCTCTGAATGGAGAGATTGAGAGGGATGTCGGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp ACTGCCCGACATCCCTCTCAATCTCTCCATTCAGAGAAAGGGATCCAGACCTTCAGGAACTCTCTCCACTaGTTCCACGTAGGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: TARHPSQSLHSEKGIQTFRNSLH*FHVGSL
Trigger: TAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCT...GAAGGTCTGGATCCCTTTCTCTGAATGGAGAGATTGAGAGGGATGTCGGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCAGGAACTCTCTCCACTaGTTCCACGTAGGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTRNSLH*FHVGSL
Trigger: TAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCT...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp AATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTTCTCAGCCTGGGCAGTaGCAGTCACAACACCTGGGT +
Preference number: 4 (lower is better)
Translates to: NQLVWKEGVFDQELSPLLSQPGQ*QSQHLG
Trigger: ACCCAGGTGTTGTGACTGGCACTGCCCAGGCTGAGA...AAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR GCA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTAGGAAGTCCGCTCCCTaGCTCACCCCTCTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGRKSAP*LTPLKH
Trigger: ATGCTTAAGAGGGGTGAGGCAGGGAGCGGACTTCCT...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp TGTCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTAAGACAATCCTCCCTGTaGGGATGTCAGTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: CPVMDLQPVPSKLSNQLVRQSSL*GCQSLL
Trigger: GAGCAAGGACTGACATCCGCACAGGGAGGATTGTCT...TACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGTGGTATAGGGCGTCTTaGAAAATTCTTCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRWYRAS*KILPLS
Trigger: TGACAGAGGAAGAATTTTCCAAGACGCCCTATACCA...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGTGGTATAGGGCGTCTTaGAAAATTCTTCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQWYRAS*KILPLS
Trigger: TGACAGAGGAAGAATTTTCCAAGACGCCCTATACCA...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGAGCAATCAGCTGGTATaGAAGGAAGGAGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRSNQLV*KEGVFD
Trigger: GTCAAATACTCCTTCCTTCCATACCAGCTGATTGCT...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTGAGGGCCGGTGCTTTTaGGAGGTTCATCTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGEGRCF*EVHLSQ
Trigger: TTGAGAGAGATGAACCTCTCAAAAGCACCGGCCCTC...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp ACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATGGAAGGAAGGAGTCACTAACAGAAATCTaGGGGCCGGTGCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: TSNQSQANSAISWYGRKESLTEI*GPVLLR
Trigger: TCTCAAAAGCACCGGCCCTCAGATTTCTGTTAGTGA...CTCCTTCCTTCCATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCCTCCAGTTAAAGCTGTaGGCACACCGGAAAAGAATC +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTLQLKL*AHRKRI
Trigger: GATTCTTTTCCGGTGTGCTCACAGCTTTAACTGGAG...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp AACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGGAAGGAAGGAGTATTTaGCCAGGAACTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: NSLHCFHVGSLRSRSLVTEGRSI*PGTLST
Trigger: AGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTC...CGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp AAGGTAGGAAGGTGTCGGTGTAGTCAAACAGGTACAGGTAGAGCAGACTCAGCCGAAGGAAGGAGTATTTaGCCAGGAACTCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: KVGRCRCSQTGTGRADSAEGRSI*PGTLST
Trigger: AGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTC...GGCTGAGTCTGCTCTACCTGTACCTGTTTGACTACACCGACACCTTCCTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCGATGATGAGAAACCGTaGTGTCCAGTAATGGACCTC +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTDDEKP*CPVMDL
Trigger: GAGGTCCATTACTGGACATCACGGTTTCTCATCATC...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp AGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGGATGATGAGAAACCGTaGTGTCCAGTAATGGACCTC +
Preference number: 4 (lower is better)
Translates to: RNSLHCFHVGSLRSRSLVDDEKP*CPVMDL
Trigger: GAGGTCCATTACTGGACATCACGGTTTCTCATCATC...CACCAAGCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGAACTCTCTATGCCTATaGCAGAATCTTATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMNSLCL*QNLILV
Trigger: AACAAGGATAAGATTCTGTCATAGGCATAGAGAGTT...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCTACAAAACATTTCCTTaGACAAAACGACTATCCCGG +
Preference number: 4 (lower is better)
Translates to: SAKQTILPVRMSVLARATYKTFP*TKRLSR
Trigger: CCGGGATAGTCGTTTTGTTCAAGGAAATGTTTTGTA...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp ACCTGGGTTTCCAGCCGCCGGAGTTCCTTGACCACAAGATCAATGTTAATAATTTTCCCTGTAAAGAGATaGCCAAGGGCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TWVSSRRSSLTTRSMLIIFPVKR*PRAQLL
Trigger: GAGCAGCTGGGCCCTTGGGCATCTCTTTACAGGGAA...AATTATTAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCTGGAAACCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR GCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCTGGCTCTCCTGTGGCTaGTGTTTTCTATGGTATAGG +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTWLSCG*CFLWYR
Trigger: CCTATACCATAGAAAACAGCAGCCACAGGAGAGCCA...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp TTTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGAGGAACTCTCTCCACTaGTTCCACGTAGGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: FDQELSPLLPRRLLKIQKRNSLH*FHVGSL
Trigger: TAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCT...CTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR GCA 90 bp TGTCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTAAGGAACTCTCTCCACTaGTTCCACGTAGGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: CPVMDLQPVPSKLSNQLVRNSLH*FHVGSL
Trigger: TAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCT...TACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR GCA 90 bp ACAATTCTGAATAACATGAAGGCCACTAAATCTAATGGGAACTGCCCGACATCCGCGGATGTCAGTCCTTaGTCGTGCCACCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: TILNNMKATKSNGNCPTSADVSP*SCHPQA
Trigger: AGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGC...GGATGTCGGGCAGTTCCCATTAGATTTAGTGGCCTTCATGTTATTCAGAATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp ACCTGGGTTTCCAGCCGCCGGAGTTCCTTGACCACAAGATCAATGTTAATAATTTTGGCCACAGCCTTGTaGACCAGGAGGTCGTGTTCA +
Preference number: 4 (lower is better)
Translates to: TWVSSRRSSLTTRSMLIILATAL*TRRSCS
Trigger: TGAACACGACCTCCTGGTCCACAAGGCTGTGGCCAA...AATTATTAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCTGGAAACCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp CCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTTGGTATAGGGCGTCTTaGAAAATTCTTCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PRRLLKIQKLGDDVLPRAWYRAS*KILPLS
Trigger: TGACAGAGGAAGAATTTTCCAAGACGCCCTATACCA...AGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp GTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGTCTGGCTGCTGTTTTCTATaGTATAGGGCGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: VGSLRSRSLVTMSSPELSGCCFL*YRASWK
Trigger: TTTCCAAGACGCCCTATACCATAGAAAACAGCAGCC...AGACAGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCAGGATGGCTCTCCTGTaGCTGCTGTTTTCTATGGTA +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTRMALL*LLFSMV
Trigger: TACCATAGAAAACAGCAGCCACAGGAGAGCCATCCT...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp GGTGTAGTCAAACAGGTACAGGTAGAGCAGACTCAGCCTGGGGGAGCTCTTGAGAGCAATCAGCTGGTATaGAAGGAAGGAGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: GVVKQVQVEQTQPGGALESNQLV*KEGVFD
Trigger: GTCAAATACTCCTTCCTTCCATACCAGCTGATTGCT...CTCAAGAGCTCCCCCAGGCTGAGTCTGCTCTACCTGTACCTGTTTGACTACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CCA 90 bp CCCAGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTCAGGCTGAAGTGCAGTaGTGCAGTCTCCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PSDYKSNHHSRLKLNPLSQAEVQ*CSLPPC
Trigger: GCAGGGAGGGAGACTGCACCACTGCACTTCAGCCTG...ACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR CAA 72 bp CCACAGGCTGAGGGGGAGAGGACATGGTTGGAGCTTTaGATATACAAAGCAGCACCTTGTTTTACTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PQAEGERTWLEL*IYKAAPCFTEG
Trigger: ACCCTCAGTAAAACAAGGTGCTGCTTTGTATATCAAAAGCTCCAACCATGTCCTCTCCCCCTCAGCCTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp GAGTATTTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCTCACTAACAGAAATCTaGGGGCCGGTGCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: EYLTRNSLHCFHVGSLRSSLTEI*GPVLLR
Trigger: TCTCAAAAGCACCGGCCCTCAGATTTCTGTTAGTGA...GGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCCCCCCTCCCATCTGCTaGTTCGCTCGGCCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLPPPIC*FARPVL
Trigger: TAACACAGGCCGAGCGAATCAGCAGATGGGAGGGGG...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp GAGTATTTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCGATGATGAGAAACCGTaGTGTCCAGTAATGGACCTC +
Preference number: 4 (lower is better)
Translates to: EYLTRNSLHCFHVGSLRSDDEKP*CPVMDL
Trigger: GAGGTCCATTACTGGACATCACGGTTTCTCATCATC...GGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR TCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCAAAAAGCCCCTGCGTTaGTACTTTCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTKKPLR*YFPEMA
Trigger: AGCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTT...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGCTTCCCATTTTTCTCTaGATTCTGGACATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQLPIFL*ILDILF
Trigger: AAACAGAATGTCCAGAATGCAGAGAAAAATGGGAAG...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR GCA 90 bp ACAATTCTGAATAACATGAAGGCCACTAAATCTAATGGGAACTGCCCGACATCCTCTCAGCCTGGGCAGTaGCAGTCACAACACCTGGGT +
Preference number: 4 (lower is better)
Translates to: TILNNMKATKSNGNCPTSSQPGQ*QSQHLG
Trigger: ACCCAGGTGTTGTGACTGGCACTGCCCAGGCTGAGA...GGATGTCGGGCAGTTCCCATTAGATTTAGTGGCCTTCATGTTATTCAGAATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCCTCGGCCTCCCAAAGTaGTGGGATCCAGGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLLGLPK*WDPGVS
Trigger: GCTCACACCTGGATCCCAGCACTTTGGGAGGCCGAG...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CCA 90 bp GATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACATCTCACACCTGCAGGATGGCTCTCCTGTaGCTGCTGTTTTCTATGGTA +
Preference number: 4 (lower is better)
Translates to: DVGLFLQGLSSKMTSHTCRMALL*LLFSMV
Trigger: TACCATAGAAAACAGCAGCCACAGGAGAGCCATCCT...GCAGGTGTGAGATGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp TGTCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTAGAGGGGGAGAGGACATaGTTGGAGCTTTTGATATAC +
Preference number: 4 (lower is better)
Translates to: CPVMDLQPVPSKLSNQLVEGERT*LELLIY
Trigger: GTATATCAAAAGCTCCAACCATGTCCTCTCCCCCTC...TACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp CCGCTCCCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTTATAACTATAGCGCTTaGTGTAATTATACCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PLPASPLLSIKAQTSAGLYNYSA*CNYTCC
Trigger: ACAGCAGGTATAATTACACCAAGCGCTATAGTTATA...AAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGGGAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTTCACTAACAGAAATCTaGGGGCCGGTGCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGSLTEI*GPVLLR
Trigger: TCTCAAAAGCACCGGCCCTCAGATTTCTGTTAGTGA...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR TCA 90 bp ACTGCCCGACATCCCTCTCAATCTCTCCATTCAGAGAAAGGGATCCAGACCTTCTCATTCCCATATTTCTaGAAGGCTGCAAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: TARHPSQSLHSEKGIQTFSFPYF*KAARLW
Trigger: CCAAAGTCTTGCAGCCTTTCAGAAATATGGGAATGA...GAAGGTCTGGATCCCTTTCTCTGAATGGAGAGATTGAGAGGGATGTCGGGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp CCCAGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTTGGCTCCACATCCTCTaGGGCACGGTCTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PSDYKSNHHSRLKLNPLSWLHIL*GTVFSS
Trigger: TGAACTGAAGACCGTGCCTCAGAGGATGTGGAGCCA...ACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp CTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCAGAACTGAGAGTAACATAGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLDQILQKENNSRTESNIDVSGT*RVSAWA
Trigger: TGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTC...TATGTTACTCTCAGTTCTGGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGAACTCTCTATGCCTATaGCAGAATCTTATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PASPLLSIKAQTSAGLEENSLCL*QNLILV
Trigger: AACAAGGATAAGATTCTGTCATAGGCATAGAGAGTT...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR GCA 90 bp ACCTGGGTTTCCAGCCGCCGGAGTTCCTTGACCACAAGATCAATGTTAATAATTGTTCAGATTCCCTGCTaGTCCAGTGATAGACGAGCA +
Preference number: 4 (lower is better)
Translates to: TWVSSRRSSLTTRSMLIIVQIPC*SSDRRA
Trigger: TGCTCGTCTATCACTGGAGCAGCAGGGAATCTGAAC...AATTATTAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCTGGAAACCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR GCA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTTGGCTCTCCTGTGGCTaGTGTTTTCTATGGTATAGG +
Preference number: 4 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGWLSCG*CFLWYR
Trigger: CCTATACCATAGAAAACAGCAGCCACAGGAGAGCCA...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGATCAATGTTAATAATTaGGTTAAAGTACAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: KQTILPVRMSVLARATHRINVNN*VKVQGP
Trigger: TGGGCCCTGTACTTTAACCCAATTATTAACATTGAT...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCATCAATGTTAATAATTaGGTTAAAGTACAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SAKQTILPVRMSVLARATINVNN*VKVQGP
Trigger: TGGGCCCTGTACTTTAACCCAATTATTAACATTGAT...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR TCA 90 bp CTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCAGAACTGAGAGTAACATACACGTTCTAGCTCCATaGGGATGGCTCTCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLDQILQKENNSRTESNIHVLAP*GWLSCG
Trigger: GCCACAGGAGAGCCATCCTCATGGAGCTAGAACGTG...TATGTTACTCTCAGTTCTGGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR GCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCTTCCCTGTAAAGAGATaGCCAAGGGCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLFPVKR*PRAQLL
Trigger: GAGCAGCTGGGCCCTTGGGCATCTCTTTACAGGGAA...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR GCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCGGAGTCTTGCCTTGTTaGCTAGGCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLGVLPC*LGWSAV
Trigger: CACTGCACTCCAGCCTAGGCAACAAGGCAAGACTCC...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CCA 90 bp TCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATGTGGTATAGGGCGTCTTaGAAAATTCTTCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SSNGPPTSPKQTQQSAGMWYRAS*KILPLS
Trigger: TGACAGAGGAAGAATTTTCCAAGACGCCCTATACCA...CATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp ACCTGGGTTTCCAGCCGCCGGAGTTCCTTGACCACAAGATCAATGTTAATAATTAGGATGGCTCTCCTGTaGCTGCTGTTTTCTATGGTA +
Preference number: 4 (lower is better)
Translates to: TWVSSRRSSLTTRSMLIIRMALL*LLFSMV
Trigger: TACCATAGAAAACAGCAGCCACAGGAGAGCCATCCT...AATTATTAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCTGGAAACCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp AGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTCCACAGCAATCAGCTGGTATaGAAGGAAGGAGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: SWYGRKEYLTRNSLHCFHSNQLV*KEGVFD
Trigger: GTCAAATACTCCTTCCTTCCATACCAGCTGATTGCT...GTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CCA 90 bp GGTGTAGTCAAACAGGTACAGGTAGAGCAGACTCAGCCTGGGGGAGCTCTTGAGATCAATGTTAATAATTaGGTTAAAGTACAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GVVKQVQVEQTQPGGALEINVNN*VKVQGP
Trigger: TGGGCCCTGTACTTTAACCCAATTATTAACATTGAT...CTCAAGAGCTCCCCCAGGCTGAGTCTGCTCTACCTGTACCTGTTTGACTACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCGTGAGCCACCGCGCCTaGCCTGGATTATATCTCAAG +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLVSHRA*PGLYLK
Trigger: CTTGAGATATAATCCAGGCCAGGCGCGGTGGCTCAC...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCGAGGGCCGGTGCTTTTaGGAGGTTCATCTCTCTCAA +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLEGRCF*EVHLSQ
Trigger: TTGAGAGAGATGAACCTCTCAAAAGCACCGGCCCTC...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGCCCCCTCCCATCTGCTaGTTCGCTCGGCCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVPPPIC*FARPVL
Trigger: TAACACAGGCCGAGCGAATCAGCAGATGGGAGGGGG...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp AGTTCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: SSLHAIFITIALGVIIPAAWGSS*GRIAGT
Trigger: TGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGC...AGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp TCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTGTAGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: SLHAIFITIALGVIIPAVAWGSS*GRIAGT
Trigger: TGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGC...TACAGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp CTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCAGAACTGAGAGTAACATATGGCTCCACATCCTCTaGGGCACGGTCTTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: LLDQILQKENNSRTESNIWLHIL*GTVFSS
Trigger: TGAACTGAAGACCGTGCCTCAGAGGATGTGGAGCCA...TATGTTACTCTCAGTTCTGGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCCCTCTTGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLPLGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCAAGAGG...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR GCA 90 bp ACTGCCCGACATCCCTCTCAATCTCTCCATTCAGAGAAAGGGATCCAGACCTTCCTTCCCATTTTTCTCTaGATTCTGGACATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: TARHPSQSLHSEKGIQTFLPIFL*ILDILF
Trigger: AAACAGAATGTCCAGAATGCAGAGAAAAATGGGAAG...GAAGGTCTGGATCCCTTTCTCTGAATGGAGAGATTGAGAGGGATGTCGGGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp GTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGTCTATCAATGTTAATAATTaGGTTAAAGTACAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VGSLRSRSLVTMSSPELSINVNN*VKVQGP
Trigger: TGGGCCCTGTACTTTAACCCAATTATTAACATTGAT...AGACAGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp TCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTGTAGCCAGTCACAACACCTaGGTTTCCAGCCGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: SLHAIFITIALGVIIPAVASHNT*VSSRRS
Trigger: ACTCCGGCGGCTGGAAACCCAGGTGTTGTGACTGGC...TACAGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
3UTR CAA 72 bp AGTCACAACACCTGGGTTTCCAGCCGCCGGAGTTCCTaGACCACAAGATCAATGTTAATAATTGGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: SHNTWVSSRRSS*TTRSMLIIGLK
Trigger: CTTTAACCCAATTATTAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCTGGAAACCCAGGTGTTGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp AATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTCATGGTTGGAGCTTTTaGTATACAAAGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: NQLVWKEGVFDQELSPLLHGWSF*YTKQHL
Trigger: AAGGTGCTGCTTTGTATATCAAAAGCTCCAACCATG...AAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp GATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACATCTCACACCTGCAACTCTCTATGCCTATaGCAGAATCTTATCCTTGTT +
Preference number: 4 (lower is better)
Translates to: DVGLFLQGLSSKMTSHTCNSLCL*QNLILV
Trigger: AACAAGGATAAGATTCTGTCATAGGCATAGAGAGTT...GCAGGTGTGAGATGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTTACAAAACATTTCCTTaGACAAAACGACTATCCCGG +
Preference number: 4 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGYKTFP*TKRLSR
Trigger: CCGGGATAGTCGTTTTGTTCAAGGAAATGTTTTGTA...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp TCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATGCTTCCCATTTTTCTCTaGATTCTGGACATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SSNGPPTSPKQTQQSAGMLPIFL*ILDILF
Trigger: AAACAGAATGTCCAGAATGCAGAGAAAAATGGGAAG...CATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR GCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCGTTCAGATTCCCTGCTaGTCCAGTGATAGACGAGCA +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLVQIPC*SSDRRA
Trigger: TGCTCGTCTATCACTGGAGCAGCAGGGAATCTGAAC...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR GCA 90 bp AGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTTTTCTCACCCACCCAAAGTaGTGGGATTACAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SDYKSNHHSRLKLNPLSFLTHPK*WDYRGE
Trigger: CTCACCCCTGTAATCCCAGCACTTTGGGTGGGTGAG...AAAACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAACTTCCGCCGTCCATTTaGCCACAGCCTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: TLFVNTLKTMDCALQTCELPPSI*PQPCGP
Trigger: TGGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAG...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CCA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGCTTCCGCCGTCCATTTaGCCACAGCCTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVLPPSI*PQPCGP
Trigger: TGGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAG...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CCA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCATCAATGTTAATAATTaGGTTAAAGTACAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTINVNN*VKVQGP
Trigger: TGGGCCCTGTACTTTAACCCAATTATTAACATTGAT...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCAGACAGAAAGTAGAATaGTGTTTGCCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLRQKVE*CLPGAG
Trigger: CCCAGCCCCTGGCAAACACCATTCTACTTTCTGTCT...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCTCACTAACAGAAATCTaGGGGCCGGTGCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLSLTEI*GPVLLR
Trigger: TCTCAAAAGCACCGGCCCTCAGATTTCTGTTAGTGA...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp TTCAGTTCACTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCAGAACTGAGTCACTAACAGAAATCTaGGGGCCGGTGCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: FSSLLDQILQKENNSRTESLTEI*GPVLLR
Trigger: TCTCAAAAGCACCGGCCCTCAGATTTCTGTTAGTGA...CTCAGTTCTGGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAGTGAACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAACATAAAGCAAGGCAGTaGCGGCAGAAGCTGTGCCCA +
Preference number: 4 (lower is better)
Translates to: TLFVNTLKTMDCALQTCEHKARQ*RQKLCP
Trigger: TGGGCACAGCTTCTGCCGTCACTGCCTTGCTTTATG...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCCTCCAGTTAAAGCTGTaGGCACACCGGAAAAGAATC +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLLQLKL*AHRKRI
Trigger: GATTCTTTTCCGGTGTGCTCACAGCTTTAACTGGAG...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp CCCAGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTAAAAAGCCCCTGCGTTaGTACTTTCCAGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: PSDYKSNHHSRLKLNPLSKKPLR*YFPEMA
Trigger: AGCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTT...ACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTTCCCTGTAAAGAGATaGCCAAGGGCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVFPVKR*PRAQLL
Trigger: GAGCAGCTGGGCCCTTGGGCATCTCTTTACAGGGAA...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR GCA 90 bp TCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTGTATTCCCTGTAAAGAGATaGCCAAGGGCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SLHAIFITIALGVIIPAVFPVKR*PRAQLL
Trigger: GAGCAGCTGGGCCCTTGGGCATCTCTTTACAGGGAA...TACAGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAATTGGCCACAGCCTTGTaGACCAGGAGGTCGTGTTCA +
Preference number: 4 (lower is better)
Translates to: TLFVNTLKTMDCALQTCELATAL*TRRSCS
Trigger: TGAACACGACCTCCTGGTCCACAAGGCTGTGGCCAA...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CCA 90 bp CCCAGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTGGCTGCTGTTTTCTATaGTATAGGGCGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: PSDYKSNHHSRLKLNPLSGCCFL*YRASWK
Trigger: TTTCCAAGACGCCCTATACCATAGAAAACAGCAGCC...ACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAAGTGAGCCACCGCGCCTaGCCTGGATTATATCTCAAG +
Preference number: 4 (lower is better)
Translates to: TLFVNTLKTMDCALQTCEVSHRA*PGLYLK
Trigger: CTTGAGATATAATCCAGGCCAGGCGCGGTGGCTCAC...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCGTAACCTCCACCTCTTaGGTTCAAGTGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLVTSTS*VQVILL
Trigger: CAGGAGAATCACTTGAACCCAAGAGGTGGAGGTTAC...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGCTGGTCTGGAACTCCTaGCCTCAAATGATCGATCCG +
Preference number: 4 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVLVWNS*PQMIDP
Trigger: CGGATCGATCATTTGAGGTCAGGAGTTCCAGACCAG...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGCCTCTTGGGTTCAAGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVPLGFK*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACTTGAACCCAAGAGG...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CCA 90 bp TTCAGTTCACTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCAGAACTGAGGGCTGCTGTTTTCTATaGTATAGGGCGTCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: FSSLLDQILQKENNSRTEGCCFL*YRASWK
Trigger: TTTCCAAGACGCCCTATACCATAGAAAACAGCAGCC...CTCAGTTCTGGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAGTGAACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTATCAATGTTAATAATTaGGTTAAAGTACAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGINVNN*VKVQGP
Trigger: TGGGCCCTGTACTTTAACCCAATTATTAACATTGAT...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CCA 90 bp ACAATTCTGAATAACATGAAGGCCACTAAATCTAATGGGAACTGCCCGACATCCCTGCTGTGTTCACACTaGAAGGAAATAAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: TILNNMKATKSNGNCPTSLLCSH*KEIKGH
Trigger: ATGGCCTTTTATTTCCTTCCAGTGTGAACACAGCAG...GGATGTCGGGCAGTTCCCATTAGATTTAGTGGCCTTCATGTTATTCAGAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCTCATTCCCATATTTCTaGAAGGCTGCAAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLSFPYF*KAARLW
Trigger: CCAAAGTCTTGCAGCCTTTCAGAAATATGGGAATGA...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCGGGAGAAATGAGGATTaGCTGAAGGGTAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLGRNED*LKGKSF
Trigger: AAAGCTTTTACCCTTCAGTCAATCCTCATTTCTCCC...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR GCA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGCGTGTTCAGATTCCCTaGTGCTCCAGTGATAGACGA +
Preference number: 4 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVRVQIP*CSSDRR
Trigger: TCGTCTATCACTGGAGCAGCAGGGAATCTGAACACG...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR GCA 90 bp ATTCTCCAAAAGGAGAATAATTCCAGAACTGAGAGTAACATAGCATTGATGATGCGTGTTCAGATTCCCTaGTGCTCCAGTGATAGACGA +
Preference number: 4 (lower is better)
Translates to: ILQKENNSRTESNIALMMRVQIP*CSSDRR
Trigger: TCGTCTATCACTGGAGCAGCAGGGAATCTGAACACG...CATCATCAATGCTATGTTACTCTCAGTTCTGGAATTATTCTCCTTTTGGAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR GCA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAACGTGTTCAGATTCCCTaGTGCTCCAGTGATAGACGA +
Preference number: 4 (lower is better)
Translates to: TLFVNTLKTMDCALQTCERVQIP*CSSDRR
Trigger: TCGTCTATCACTGGAGCAGCAGGGAATCTGAACACG...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CCA 90 bp ATTCTCCAAAAGGAGAATAATTCCAGAACTGAGAGTAACATAGCATTGATGATGGAACAGGGACCTGCCTaGGTTCACAGCCTTATATTC +
Preference number: 4 (lower is better)
Translates to: ILQKENNSRTESNIALMMEQGPA*VHSLIF
Trigger: GAATATAAGGCTGTGAACCCAGGCAGGTCCCTGTTC...CATCATCAATGCTATGTTACTCTCAGTTCTGGAATTATTCTCCTTTTGGAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CCA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAAAGACAGAAAGTAGAATaGTGTTTGCCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TLFVNTLKTMDCALQTCERQKVE*CLPGAG
Trigger: CCCAGCCCCTGGCAAACACCATTCTACTTTCTGTCT...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGCTCCAGTTAAAGCTGTaGGCACACCGGAAAAGAATC +
Preference number: 4 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVLQLKL*AHRKRI
Trigger: GATTCTTTTCCGGTGTGCTCACAGCTTTAACTGGAG...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR GCA 90 bp AGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTTTTAAATCTAATGGGAACTaGCCGACATCCCTCTCAATC +
Preference number: 4 (lower is better)
Translates to: SDYKSNHHSRLKLNPLSFKSNGN*PTSLSI
Trigger: GATTGAGAGGGATGTCGGGCAGTTCCCATTAGATTT...AAAACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp TCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTGTAATGACATCTCACACCTaGTGTGTTCACACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLHAIFITIALGVIIPAVMTSHT*CVHTGR
Trigger: CCTTCCAGTGTGAACACAGCAGGTGTGAGATGTCAT...TACAGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp CCCAGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTCAAAGGGTTAATGAATaGTTCATGGAGTCACAAGAT +
Preference number: 4 (lower is better)
Translates to: PSDYKSNHHSRLKLNPLSQRVNE*FMESQD
Trigger: ATCTTGTGACTCCATGAACCATTCATTAACCCTTTG...ACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGGTAACCTCCACCTCTTaGGTTCAAGTGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVVTSTS*VQVILL
Trigger: CAGGAGAATCACTTGAACCCAAGAGGTGGAGGTTAC...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
3UTR CAA 72 bp GTTAATGAATGGTTCATGGAGTCACAAGATAATATTTaGGATGTAGGCCTATTTCTGCAAGGCCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VNEWFMESQDNI*DVGLFLQGLSS
Trigger: GGAAGACAGGCCTTGCAGAAATAGGCCTACATCCAAAATATTATCTTGTGACTCCATGAACCATTCATTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp AGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTTTTCATGGTTGGAGCTTTTaGTATACAAAGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: SDYKSNHHSRLKLNPLSFHGWSF*YTKQHL
Trigger: AAGGTGCTGCTTTGTATATCAAAAGCTCCAACCATG...AAAACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR TCA 90 bp AATAATTGGGTTAAAGTACAGGGCCCAGTAAAACAAACAGTTGCAAACAAACTGCATGGTTGGAGCTTTTaGTATACAAAGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: NNWVKVQGPVKQTVANKLHGWSF*YTKQHL
Trigger: AAGGTGCTGCTTTGTATATCAAAAGCTCCAACCATG...CAGTTTGTTTGCAACTGTTTGTTTTACTGGGCCCTGTACTTTAACCCAATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR TCA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAATCATTCCCATATTTCTaGAAGGCTGCAAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: TLFVNTLKTMDCALQTCESFPYF*KAARLW
Trigger: CCAAAGTCTTGCAGCCTTTCAGAAATATGGGAATGA...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR TCA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAAGGGAGAAATGAGGATTaGCTGAAGGGTAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: TLFVNTLKTMDCALQTCEGRNED*LKGKSF
Trigger: AAAGCTTTTACCCTTCAGTCAATCCTCATTTCTCCC...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CCA 90 bp AGTTCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTTGGTATAGGGCGTCTTaGAAAATTCTTCCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: SSLHAIFITIALGVIIPAWYRAS*KILPLS
Trigger: TGACAGAGGAAGAATTTTCCAAGACGCCCTATACCA...AGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CCA 90 bp TCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTGTAAGCAATCAGCTGGTATaGAAGGAAGGAGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: SLHAIFITIALGVIIPAVSNQLV*KEGVFD
Trigger: GTCAAATACTCCTTCCTTCCATACCAGCTGATTGCT...TACAGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR GCA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGCTTCCCATTTTTCTCTaGATTCTGGACATTCTGTTT +
Preference number: 4 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVLPIFL*ILDILF
Trigger: AAACAGAATGTCCAGAATGCAGAGAAAAATGGGAAG...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CCA 90 bp AGTTCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTTATAACTATAGCGCTTaGTGTAATTATACCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSLHAIFITIALGVIIPAYNYSA*CNYTCC
Trigger: ACAGCAGGTATAATTACACCAAGCGCTATAGTTATA...AGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGAACT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS CCA 90 bp CCCCGAAAGGACGCAGGCGAGGCCCAGCGACCGGCTGTGCGGACGTaGGGCTCTCGGGAAGGGATAGCGCAGTTGGCCAAGCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PRKDAGEAQRPAVRT*GSREGIAQLAKLGS
Trigger: GGACCCCAGCTTGGCCAACTGCGCTATCCCTTCCCGAGAGCCCCACGTCCGCACAGCCGGTCGCTGGGCCTCGCCTGCGTCCTTTCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570219.1
ENST00000634109.1
CDS GCA 90 bp CAGCGTGGCGACTATCAGAAGCCTCATCAATTCTGGTCCGGCTGTTaGAGGGTGTGGCAAGCGCTCCTGGCGGGCAGGCGCCCCGTGGTT +
Preference number: 5 (lower is better)
Translates to: QRGDYQKPHQFWSGC*RVWQALLAGRRPVV
Trigger: AACCACGGGGCGCCTGCCCGCCAGGAGCGCTTGCCACACCCTGCAACAGCCGGACCAGAATTGATGAGGCTTCTGATAGTCGCCACGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570219.1
ENST00000634109.1
CDS CCA 90 bp CCAGGAGTCCGGGCCCTGGGCCTTTTCTGGGTGCTGGGAAGAGCATaGCTGCCCGTGCTGAATGTCCTTGTCTTCTGTCCCCGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: PGVRALGLFWVLGRA*LPVLNVLVFCPRCL
Trigger: CAGGCACCGGGGACAGAAGACAAGGACATTCAGCACGGGCAGCCATGCTCTTCCCAGCACCCAGAAAAGGCCCAGGGCCCGGACTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563082.1
ENST00000631725.1
CDS CCA 90 bp CTCATCAATTCTGGTCCGGCTGTTGCAGGGTGTGGCAAGCGCTCCTaGCGGGCAGGCGCCCCGTGGTTCCCCTCCAAGGTGTTTGGAAGC +
Preference number: 5 (lower is better)
Translates to: LINSGPAVAGCGKRS*RAGAPWFPSKVFGS
Trigger: GCTTCCAAACACCTTGGAGGGGAACCACGGGGCGCCTGCCCGCCAGGAGCGCTTGCCACACCCTGCAACAGCCGGACCAGAATTGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570219.1
ENST00000634109.1
CDS-3UTR CAA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCTGCGGATGTCAGTCCTaGCTCGTGCCACCCACAGGC +
Preference number: 5 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSCGCQS*LVPPTG
Trigger: GCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCA...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCAGCCTGGGGGAGCTCTaGAGGGCGTATAGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSSLGEL*RAYSRN
Trigger: GTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCT...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGTGCGGATGTCAGTCCTaGCTCGTGCCACCCACAGGC +
Preference number: 5 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLCGCQS*LVPPTG
Trigger: GCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCA...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS CCA 90 bp GGCCCAGCTGCTCCAGCCAGAGGACAACTTCTTCCGCCGTCCATTTaGCCACAGCCTTGTGGACCAGGAGGTCGTGTTCAGATTCCCTGC +
Preference number: 5 (lower is better)
Translates to: GPAAPARGQLLPPSI*PQPCGPGGRVQIPC
Trigger: GCAGGGAATCTGAACACGACCTCCTGGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAGAAGTTGTCCTCTGGCTGGAGCAGCTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261658.7
ENST00000562442.5
ENST00000566520.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632966.1
ENST00000634058.1
CDS-3UTR CAA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGATGCGGATGTCAGTCCTaGCTCGTGCCACCCACAGGC +
Preference number: 5 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGCGCQS*LVPPTG
Trigger: GCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCA...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGTGCGGATGTCAGTCCTaGCTCGTGCCACCCACAGGC +
Preference number: 5 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMCGCQS*LVPPTG
Trigger: GCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCA...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp TCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGCATTTGGCCACAGCCTaGTGGACCAGGAGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: SPTPCPLRTLSLASRWGLHLATA*WTRRSC
Trigger: ACACGACCTCCTGGTCCACAAGGCTGTGGCCAAATG...CAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CAA 90 bp CCGCTCCCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTAGCCTGGGGGAGCTCTaGAGGGCGTATAGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PLPASPLLSIKAQTSAGLSLGEL*RAYSRN
Trigger: GTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCT...AAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGGGAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACAGCCTGGGGGAGCTCTaGAGGGCGTATAGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHSLGEL*RAYSRN
Trigger: GTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCT...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACAGACGTCAGCGGGACTaGAAGAGTCTCAGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHRRQRD*KSLSLG
Trigger: GCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTCT...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACGAGTCTTGCCAGCCGTaGGGGACTGAGCCTCCTAGT +
Preference number: 5 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHESCQP*GTEPPS
Trigger: ACTAGGAGGCTCAGTCCCCAACGGCTGGCAAGACTC...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACCATTTGGCCACAGCCTaGTGGACCAGGAGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHHLATA*WTRRSC
Trigger: ACACGACCTCCTGGTCCACAAGGCTGTGGCCAAATG...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CAA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCTCTTCCGCCGTCCATTaGGCCACAGCCTTGTGGACC +
Preference number: 5 (lower is better)
Translates to: SAKQTILPVRMSVLARATSSAVH*ATALWT
Trigger: GGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAGA...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
CDS-3UTR CAA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCAGACGTCAGCGGGACTaGAAGAGTCTCAGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SAKQTILPVRMSVLARATRRQRD*KSLSLG
Trigger: GCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTCT...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGGAGTCTTGCCAGCCGTaGGGGACTGAGCCTCCTAGT +
Preference number: 5 (lower is better)
Translates to: KQTILPVRMSVLARATHRESCQP*GTEPPS
Trigger: ACTAGGAGGCTCAGTCCCCAACGGCTGGCAAGACTC...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS TCA 90 bp AGTCAAACAGGTACAGGTAGAGCAGACTCAGCCTGGGGGAGCTCTTaGGGGCGTATAGCAGGAACAGGGACCTGCCTGGGTTCACAGCTG +
Preference number: 5 (lower is better)
Translates to: SQTGTGRADSAWGSS*GRIAGTGTCLGSQL
Trigger: CAGCTGTGAACCCAGGCAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAGTCTGCTCTACCTGTACCTGTTTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562545.5
ENST00000633638.1
CDS-3UTR CAA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGTCTTCCGCCGTCCATTaGGCCACAGCCTTGTGGACC +
Preference number: 5 (lower is better)
Translates to: PASPLLSIKAQTSAGLEESSAVH*ATALWT
Trigger: GGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAGA...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
CDS-3UTR CAA 90 bp CTCAGCCTGGGGGAGCTCTTGAGGGCGTATAGCAGGAACAGGGACCTGCCTGGGTTCACGCCTAATGCTTaGACACGTTCTAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: LSLGELLRAYSRNRDLPGFTPNA*TRSSSM
Trigger: CATGGAGCTAGAACGTGTCAAAGCATTAGGCGTGAA...CCCAGGCAGGTCCCTGTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp GGTGTAGTCAAACAGGTACAGGTAGAGCAGACTCAGCCTGGGGGAGCTCTTGAGAGCCTGGGGGAGCTCTaGAGGGCGTATAGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GVVKQVQVEQTQPGGALESLGEL*RAYSRN
Trigger: GTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCT...CTCAAGAGCTCCCCCAGGCTGAGTCTGCTCTACCTGTACCTGTTTGACTACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CAA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCTTAAGATCCAGAAGCTaGGTGACGATGTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSLRSRS*VTMSSP
Trigger: TGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAA...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp CCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTGAGGGGGAGGGGGAGAGGACATGGTaGGAGCTTTTGATATACAAA +
Preference number: 5 (lower is better)
Translates to: PPCADVSPCSCHPQAEGEGERTW*ELLIYK
Trigger: TTTGTATATCAAAAGCTCCAACCATGTCCTCTCCCC...CTCCCCCTCAGCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS GCA 90 bp TGGCCACAGCCTTGTGGACCAGGAGGTCGTGTTCAGATTCCCTGCTaGTCCAGTGATAGACGAGCAGGACCACTGCCACTCCAGTTAAAG +
Preference number: 5 (lower is better)
Translates to: WPQPCGPGGRVQIPC*SSDRRAGPLPLQLK
Trigger: CTTTAACTGGAGTGGCAGTGGTCCTGCTCGTCTATCACTGGAGCAGCAGGGAATCTGAACACGACCTCCTGGTCCACAAGGCTGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000562442.5
ENST00000619034.2
ENST00000632966.1
CDS GCA 90 bp TGGCCACAGCCTTGTGGACCAGGAGGTCGTGTTCAGATTCCCTGCTaGTCCAGTGATAGACGAGCAGGACCACCTGAGGAGAATACTGAC +
Preference number: 5 (lower is better)
Translates to: WPQPCGPGGRVQIPC*SSDRRAGPPEENTD
Trigger: GTCAGTATTCTCCTCAGGTGGTCCTGCTCGTCTATCACTGGAGCAGCAGGGAATCTGAACACGACCTCCTGGTCCACAAGGCTGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566520.5
ENST00000566710.1
ENST00000631651.1
ENST00000634058.1
CDS-3UTR CAA 90 bp CCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTCATTTGGCCACAGCCTaGTGGACCAGGAGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: PRRLLKIQKLGDDVLPRAHLATA*WTRRSC
Trigger: ACACGACCTCCTGGTCCACAAGGCTGTGGCCAAATG...AGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp GTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGTCTTCTTCCGCCGTCCATTaGGCCACAGCCTTGTGGACC +
Preference number: 5 (lower is better)
Translates to: VGSLRSRSLVTMSSPELSSSAVH*ATALWT
Trigger: GGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAGA...AGACAGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp GTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGTCTAGCCTGGGGGAGCTCTaGAGGGCGTATAGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: VGSLRSRSLVTMSSPELSSLGEL*RAYSRN
Trigger: GTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCT...AGACAGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CAA 90 bp AGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTGTCTTCAGCCTGGGGGAGCTCTaGAGGGCGTATAGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: RLLKIQKLGDDVLPRAVFSLGEL*RAYSRN
Trigger: GTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCT...GAAGACAGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CAA 90 bp CCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGACTGAGCCAAAAAGCCCCTGCGTaGATACTTTCCAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: PTPCPLRTLSLASRWGLSQKAPA*ILSRNG
Trigger: GCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTTG...GCTCAGTCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp TCCAGAAATGGCTCCACATCCTCTGAGGCACGGTCTTCAGTTCACTTCTCGACCAGACGTCAGCGGGACTaGAAGAGTCTCAGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SRNGSTSSEARSSVHFSTRRQRD*KSLSLG
Trigger: GCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTCT...GGTCGAGAAGTGAACTGAAGACCGTGCCTCAGAGGATGTGGAGCCATTTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp CTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATTGCGGATGTCAGTCCTaGCTCGTGCCACCCACAGGC +
Preference number: 5 (lower is better)
Translates to: LSPLLPRRLLKIQKLGDDCGCQS*LVPPTG
Trigger: GCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCA...ATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGATTGGCCAAGCTGGTCTaGAAGTCCTGGCTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGLAKLV*KSWLQV
Trigger: CACTTGAAGCCAGGACTTCAAGACCAGCTTGGCCAA...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS GCA 90 bp ATTTGGCCACAGCCTTGTGGACCAGGAGGTCGTGTTCAGATTCCCTaGTGCTCCAGTGATAGACGAGCAGGACCACTGCCACTCCAGTTA +
Preference number: 5 (lower is better)
Translates to: IWPQPCGPGGRVQIP*CSSDRRAGPLPLQL
Trigger: TAACTGGAGTGGCAGTGGTCCTGCTCGTCTATCACTGGAGCAGCAGGGAATCTGAACACGACCTCCTGGTCCACAAGGCTGTGGCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000562442.5
ENST00000619034.2
ENST00000632966.1
CDS CCA 90 bp AACTCTCAAGGACATGACCTACAGGGAGCTTCTTTGCCCCCACACTaGGCAAGGCCTCCCTGTGACAGCCTCAACTTCACCTGCTTCATC +
Preference number: 5 (lower is better)
Translates to: NSQGHDLQGASLPPH*ARPPCDSLNFTCFI
Trigger: GATGAAGCAGGTGAAGTTGAGGCTGTCACAGGGAGGCCTTGCCCAGTGTGGGGGCAAAGAAGCTCCCTGTAGGTCATGTCCTTGAGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563082.1
ENST00000631725.1
CDS-3UTR CAA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCAGCCTGGGGGAGCTCTaGAGGGCGTATAGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTSLGEL*RAYSRN
Trigger: GTTCCTGCTATACGCCCTCAAGAGCTCCCCCAGGCT...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGGGAAGGAAGGAGTATTaGACCAGGAACTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMGRKEY*TRNSLH
Trigger: GTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCC...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACGGAAGGAAGGAGTATTaGACCAGGAACTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHGRKEY*TRNSLH
Trigger: GTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCC...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAGGAAGGAAGGAGTATTaGACCAGGAACTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGGRKEY*TRNSLH
Trigger: GTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCC...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp CTGAGGTTGGGGAGGGGACTGATGTGGCACCCTTCTGATGTCACCCACACCATGAGCCGCCGGAGTTCCTaGACCACAAGATCAATGTTA +
Preference number: 5 (lower is better)
Translates to: LRLGRGLMWHPSDVTHTMSRRSS*TTRSML
Trigger: TAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCT...CATGGTGTGGGTGACATCAGAAGGGTGCCACATCAGTCCCCTCCCCAACCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp GCAATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTGCGGATGTCAGTCCTaGCTCGTGCCACCCACAGGC +
Preference number: 5 (lower is better)
Translates to: AISWYGRKEYLTRNSLHCCGCQS*LVPPTG
Trigger: GCCTGTGGGTGGCACGAGCAAGGACTGACATCCGCA...GCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS GCA 90 bp ATTTGGCCACAGCCTTGTGGACCAGGAGGTCGTGTTCAGATTCCCTaGTGCTCCAGTGATAGACGAGCAGGACCACCTGAGGAGAATACT +
Preference number: 5 (lower is better)
Translates to: IWPQPCGPGGRVQIP*CSSDRRAGPPEENT
Trigger: AGTATTCTCCTCAGGTGGTCCTGCTCGTCTATCACTGGAGCAGCAGGGAATCTGAACACGACCTCCTGGTCCACAAGGCTGTGGCCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566520.5
ENST00000566710.1
ENST00000631651.1
ENST00000634058.1
CDS-3UTR CAA 90 bp TCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATGTCTTCCGCCGTCCATTaGGCCACAGCCTTGTGGACC +
Preference number: 5 (lower is better)
Translates to: SSNGPPTSPKQTQQSAGMSSAVH*ATALWT
Trigger: GGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAGA...CATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTTCACGCCTAATGCTTaGACACGTTCTAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMFTPNA*TRSSSM
Trigger: CATGGAGCTAGAACGTGTCAAAGCATTAGGCGTGAA...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS TCA 90 bp TGTTCACACCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTaGAGAGTCTCAGCCTGGGCAGTGCCAGTCACAACACCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: CSHPLKHQSSDVSGT*RVSAWAVPVTTPGF
Trigger: AAACCCAGGTGTTGTGACTGGCACTGCCCAGGCTGAGACTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGTGTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563082.1
ENST00000631725.1
CDS-3UTR CAA 90 bp TGTCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTACATTTGGCCACAGCCTaGTGGACCAGGAGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: CPVMDLQPVPSKLSNQLVHLATA*WTRRSC
Trigger: ACACGACCTCCTGGTCCACAAGGCTGTGGCCAAATG...TACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGTTCACGCCTAATGCTTaGACACGTTCTAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQFTPNA*TRSSSM
Trigger: CATGGAGCTAGAACGTGTCAAAGCATTAGGCGTGAA...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCTTCACGCCTAATGCTTaGACACGTTCTAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: SAKQTILPVRMSVLARATFTPNA*TRSSSM
Trigger: CATGGAGCTAGAACGTGTCAAAGCATTAGGCGTGAA...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGTTCACGCCTAATGCTTaGACACGTTCTAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: KQTILPVRMSVLARATHRFTPNA*TRSSSM
Trigger: CATGGAGCTAGAACGTGTCAAAGCATTAGGCGTGAA...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp CCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGATGTCCTCCCCAGAGCTTTAAGATCCAGAAGCTaGGTGACGATGTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PRRLLKIQKLGDDVLPRALRSRS*VTMSSP
Trigger: TGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAA...AGCTCTGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CAA 90 bp TCAGCCAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCAAAAAGCCCCTGCGTaGATACTTTCCAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: SAKQTILPVRMSVLARATQKAPA*ILSRNG
Trigger: GCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTTG...GGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGCAAAAAGCCCCTGCGTaGATACTTTCCAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQQKAPA*ILSRNG
Trigger: GCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTTG...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS TCA 90 bp CCTACAGGGAGCTTCTTTGCCCCCACACTGGGCAAGGCCTCCCTGTaGCAGCCTCAACTTCACCTGCTTCATCACTTTGTTACATTTACA +
Preference number: 5 (lower is better)
Translates to: PTGSFFAPTLGKASL*QPQLHLLHHFVTFT
Trigger: TGTAAATGTAACAAAGTGATGAAGCAGGTGAAGTTGAGGCTGTCACAGGGAGGCCTTGCCCAGTGTGGGGGCAAAGAAGCTCCCTGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563082.1
ENST00000631725.1
CDS-3UTR CAA 90 bp GAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGTGGCACAGGAGAATACTGACTTaGGGGAAACCTTCCCATTTT +
Preference number: 5 (lower is better)
Translates to: EIRILCQSLRLGRGLMWHRRILT*GKPSHF
Trigger: AAAATGGGAAGGTTTCCCCAAAGTCAGTATTCTCCT...GTGCCACATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp CCGCTCCCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTACATGGTTGGAGCTTTaGATATACAAAGCAGCACCT +
Preference number: 5 (lower is better)
Translates to: PLPASPLLSIKAQTSAGLTWLEL*IYKAAP
Trigger: AGGTGCTGCTTTGTATATCAAAAGCTCCAACCATGT...AAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGGGAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp GGCTCTGAGATCCGGATCCTCTGTCAGTCACTGAGGTTGGGGAGGGGACTGATGACATGGTTGGAGCTTTaGATATACAAAGCAGCACCT +
Preference number: 5 (lower is better)
Translates to: GSEIRILCQSLRLGRGLMTWLEL*IYKAAP
Trigger: AGGTGCTGCTTTGTATATCAAAAGCTCCAACCATGT...CATCAGTCCCCTCCCCAACCTCAGTGACTGACAGAGGATCCGGATCTCAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGGGGGAGAGGACATGGTaGGAGCTTTTGATATACAAA +
Preference number: 5 (lower is better)
Translates to: KQTILPVRMSVLARATHRGERTW*ELLIYK
Trigger: TTTGTATATCAAAAGCTCCAACCATGTCCTCTCCCC...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS TCA 90 bp AAAAGCCCCTGCGTTGATACTTTCCAGAAATGGCTCCACATCCTCTaGGGCACGGTCCTGAAACAAGAAGAGAAGAGGCTGAATCGGAGG +
Preference number: 5 (lower is better)
Translates to: KSPCVDTFQKWLHIL*GTVLKQEEKRLNRR
Trigger: CCTCCGATTCAGCCTCTTCTCTTCTTGTTTCAGGACCGTGCCTCAGAGGATGTGGAGCCATTTCTGGAAAGTATCAACGCAGGGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563082.1
ENST00000631725.1
CDS-3UTR CAA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGAGGAGAATACTGACTTaGGGGAAACCTTCCCATTTT +
Preference number: 5 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQRRILT*GKPSHF
Trigger: AAAATGGGAAGGTTTCCCCAAAGTCAGTATTCTCCT...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCTTAAGATCCAGAAGCTaGGTGACGATGTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTLRSRS*VTMSSP
Trigger: TGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAA...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCGGAAGGAAGGAGTATTaGACCAGGAACTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTGRKEY*TRNSLH
Trigger: GTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCC...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp TTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCGGAAGGAAGGAGTATTaGACCAGGAACTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LTRNSLHCFHVGSLRSRSGRKEY*TRNSLH
Trigger: GTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCC...GCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CAA 90 bp ATGTCACCCACACCATGTCCACTGAGGACCCTGAGTCTTGCCAGCCGTTGGGGAGAGAGTAACATAGCATaGATGATGAGAAACCGTGAT +
Preference number: 5 (lower is better)
Translates to: MSPTPCPLRTLSLASRWGESNIA*MMRNRD
Trigger: ATCACGGTTTCTCATCATCAATGCTATGTTACTCTC...TCCCCAACGGCTGGCAAGACTCAGGGTCCTCAGTGGACATGGTGTGGGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp AACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCTTGGTGACGAGCCGCCGGAGTTCCTaGACCACAAGATCAATGTTA +
Preference number: 5 (lower is better)
Translates to: NSLHCFHVGSLRSRSLVTSRRSS*TTRSML
Trigger: TAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCT...CGTCACCAAGCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp GATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACATCTCACACCTGCTTGGCCAAGCTGGTCTaGAAGTCCTGGCTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: DVGLFLQGLSSKMTSHTCLAKLV*KSWLQV
Trigger: CACTTGAAGCCAGGACTTCAAGACCAGCTTGGCCAA...GCAGGTGTGAGATGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CAA 90 bp TTTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGTTAAGATCCAGAAGCTaGGTGACGATGTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: FDQELSPLLPRRLLKIQKLRSRS*VTMSSP
Trigger: TGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAA...CTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CAA 90 bp TGTCCAGTAATGGACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTAGGAAGGAAGGAGTATTaGACCAGGAACTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: CPVMDLQPVPSKLSNQLVGRKEY*TRNSLH
Trigger: GTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCC...TACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGTCCATTACTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CAA 90 bp GAGTATTTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCGGAAGGAAGGAGTATTaGACCAGGAACTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: EYLTRNSLHCFHVGSLRSGRKEY*TRNSLH
Trigger: GTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCC...GGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CAA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGAGAGTAACATAGCATaGATGATGAGAAACCGTGAT +
Preference number: 5 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQESNIA*MMRNRD
Trigger: ATCACGGTTTCTCATCATCAATGCTATGTTACTCTC...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp TTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCCAAAAAGCCCCTGCGTaGATACTTTCCAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: LTRNSLHCFHVGSLRSRSQKAPA*ILSRNG
Trigger: GCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTTG...GCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp GATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACATCTCACACCTGCAGCCGCCGGAGTTCCTaGACCACAAGATCAATGTTA +
Preference number: 5 (lower is better)
Translates to: DVGLFLQGLSSKMTSHTCSRRSS*TTRSML
Trigger: TAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCT...GCAGGTGTGAGATGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CAA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGACATGGTTGGAGCTTTaGATATACAAAGCAGCACCT +
Preference number: 5 (lower is better)
Translates to: PASPLLSIKAQTSAGLEETWLEL*IYKAAP
Trigger: AGGTGCTGCTTTGTATATCAAAAGCTCCAACCATGT...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp ACAATTCTGAATAACATGAAGGCCACTAAATCTAATGGGAACTGCCCGACATCCGAGTCTTGCCAGCCGTaGGGGACTGAGCCTCCTAGT +
Preference number: 5 (lower is better)
Translates to: TILNNMKATKSNGNCPTSESCQP*GTEPPS
Trigger: ACTAGGAGGCTCAGTCCCCAACGGCTGGCAAGACTC...GGATGTCGGGCAGTTCCCATTAGATTTAGTGGCCTTCATGTTATTCAGAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CAA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCTCTTCCGCCGTCCATTaGGCCACAGCCTTGTGGACC +
Preference number: 5 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLSSAVH*ATALWT
Trigger: GGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAGA...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTTTAAGATCCAGAAGCTaGGTGACGATGTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGLRSRS*VTMSSP
Trigger: TGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAA...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp CCTGCCTCACCCCTCTTAAGCATCAAAGCTCAGACGTCAGCGGGACTTGAAGAGGAGAGTAACATAGCATaGATGATGAGAAACCGTGAT +
Preference number: 5 (lower is better)
Translates to: PASPLLSIKAQTSAGLEEESNIA*MMRNRD
Trigger: ATCACGGTTTCTCATCATCAATGCTATGTTACTCTC...CTCTTCAAGTCCCGCTGACGTCTGAGCTTTGATGCTTAAGAGGGGTGAGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp GAGTATTTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCCAAAAAGCCCCTGCGTaGATACTTTCCAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: EYLTRNSLHCFHVGSLRSQKAPA*ILSRNG
Trigger: GCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTTG...GGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp GATGTAGGCCTATTTCTGCAAGGCCTGTCTTCCAAGATGACATCTCACACCTGCCAAAAAGCCCCTGCGTaGATACTTTCCAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: DVGLFLQGLSSKMTSHTCQKAPA*ILSRNG
Trigger: GCCATTTCTGGAAAGTATCAACGCAGGGGCTTTTTG...GCAGGTGTGAGATGTCATCTTGGAAGACAGGCCTTGCAGAAATAGGCCTACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CAA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTAGCCGCCGGAGTTCCTaGACCACAAGATCAATGTTA +
Preference number: 5 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGSRRSS*TTRSML
Trigger: TAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCT...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCGGGGAGAGGACATGGTaGGAGCTTTTGATATACAAA +
Preference number: 5 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTGERTW*ELLIYK
Trigger: TTTGTATATCAAAAGCTCCAACCATGTCCTCTCCCC...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp AAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGGCTCAAACTGAATCCTTaGAGTTTTACTCTGAATCCT +
Preference number: 5 (lower is better)
Translates to: KQTILPVRMSVLARATHRLKLNP*SFTLNP
Trigger: AGGATTCAGAGTAAAACTCAAAGGATTCAGTTTGAG...CCTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CAA 90 bp CAAACAGACAATCCTCCCTGTGCGGATGTCAGTCCTTGCTCGTGCCACCCACAGTTACAAAACATTTCCTaGAACAAAACGACTATCCCG +
Preference number: 5 (lower is better)
Translates to: QTDNPPCADVSPCSCHPQLQNIS*NKTTIP
Trigger: CGGGATAGTCGTTTTGTTCAAGGAAATGTTTTGTAA...CTGTGGGTGGCACGAGCAAGGACTGACATCCGCACAGGGAGGATTGTCTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CAA 90 bp ACCTCCAACCAGTCCCAAGCAAACTCAGCAATCAGCTGGTATGGAAGGAAGGAGAGGAGAATACTGACTTaGGGGAAACCTTCCCATTTT +
Preference number: 5 (lower is better)
Translates to: TSNQSQANSAISWYGRKERRILT*GKPSHF
Trigger: AAAATGGGAAGGTTTCCCCAAAGTCAGTATTCTCCT...CTCCTTCCTTCCATACCAGCTGATTGCTGAGTTTGCTTGGGACTGGTTGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CAA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCCATTTGGCCACAGCCTaGTGGACCAGGAGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLHLATA*WTRRSC
Trigger: ACACGACCTCCTGGTCCACAAGGCTGTGGCCAAATG...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp AATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCTTTTAAGATCCAGAAGCTaGGTGACGATGTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: NQLVWKEGVFDQELSPLLLRSRS*VTMSSP
Trigger: TGGGGAGGACATCGTCACCAAGCTTCTGGATCTTAA...AAGCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CAA 90 bp GGCACGGTCTTCAGTTCACTTCTCGACCAGATTCTCCAAAAGGAGAATAATTCCGGAAGGAAGGAGTATTaGACCAGGAACTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: GTVFSSLLDQILQKENNSGRKEY*TRNSLH
Trigger: GTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCC...GGAATTATTCTCCTTTTGGAGAATCTGGTCGAGAAGTGAACTGAAGACCGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp GAGTATTTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGGAGAATACTGACTTaGGGGAAACCTTCCCATTTT +
Preference number: 5 (lower is better)
Translates to: EYLTRNSLHCFHVGSLRSRRILT*GKPSHF
Trigger: AAAATGGGAAGGTTTCCCCAAAGTCAGTATTCTCCT...GGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAAATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563313.5
ENST00000566710.1
ENST00000631407.1
ENST00000631651.1
CDS-3UTR CAA 90 bp TTGACCAGGAACTCTCTCCACTGCTTCCACGTAGGCTCCTTAAGATCCAGAAGCGAGAGTAACATAGCATaGATGATGAGAAACCGTGAT +
Preference number: 5 (lower is better)
Translates to: LTRNSLHCFHVGSLRSRSESNIA*MMRNRD
Trigger: ATCACGGTTTCTCATCATCAATGCTATGTTACTCTC...GCTTCTGGATCTTAAGGAGCCTACGTGGAAGCAGTGGAGAGAGTTCCTGGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp CAGCACCTTGTTTTACTGAGGGTAGAAAATAGGAAGTCCGCTCCCTGCCTCACCGAGAGTAACATAGCATaGATGATGAGAAACCGTGAT +
Preference number: 5 (lower is better)
Translates to: QHLVLLRVENRKSAPCLTESNIA*MMRNRD
Trigger: ATCACGGTTTCTCATCATCAATGCTATGTTACTCTC...GGTGAGGCAGGGAGCGGACTTCCTATTTTCTACCCTCAGTAAAACAAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632391.1
CDS-3UTR CAA 90 bp GCAATCAGCTGGTATGGAAGGAAGGAGTATTTGACCAGGAACTCTCTCCACTGCACATGGTTGGAGCTTTaGATATACAAAGCAGCACCT +
Preference number: 5 (lower is better)
Translates to: AISWYGRKEYLTRNSLHCTWLEL*IYKAAP
Trigger: AGGTGCTGCTTTGTATATCAAAAGCTCCAACCATGT...GCAGTGGAGAGAGTTCCTGGTCAAATACTCCTTCCTTCCATACCAGCTGATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTCTTCCGCCGTCCATTaGGCCACAGCCTTGTGGACC +
Preference number: 5 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVSSAVH*ATALWT
Trigger: GGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAGA...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp CCCAGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTAGCCGCCGGAGTTCCTaGACCACAAGATCAATGTTA +
Preference number: 5 (lower is better)
Translates to: PSDYKSNHHSRLKLNPLSSRRSS*TTRSML
Trigger: TAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCT...ACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CAA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGCATTTGGCCACAGCCTaGTGGACCAGGAGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVHLATA*WTRRSC
Trigger: ACACGACCTCCTGGTCCACAAGGCTGTGGCCAAATG...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp CCTTGTTTTCCTAAACTTGACTTAGAGGACAGGCCAGGCCCCAATAAACCTGGTGAGAGTAACATAGCATaGATGATGAGAAACCGTGAT +
Preference number: 5 (lower is better)
Translates to: PCFPKLDLEDRPGPNKPGESNIA*MMRNRD
Trigger: ATCACGGTTTCTCATCATCAATGCTATGTTACTCTC...ACCAGGTTTATTGGGGCCTGGCCTGTCCTCTAAGTCAAGTTTAGGAAAACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000563971.5
ENST00000619034.2
ENST00000632391.1
CDS-3UTR CAA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCTGCAGTGGCATGATCTaGGCTCATTGTAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLCSGMI*AHCNLH
Trigger: GTGGAGGTTACAATGAGCCAAGATCATGCCACTGCA...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCTGTAACCTCCACCTCTaGGGTTCAAGTGATTCTCCT +
Preference number: 5 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLCNLHL*GSSDSP
Trigger: AGGAGAATCACTTGAACCCAAGAGGTGGAGGTTACA...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAAAAAGTAGAATGGTGTTaGCCAGGGGCTGGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: TLFVNTLKTMDCALQTCEKVEWC*PGAGGW
Trigger: CCAACCCCCAGCCCCTGGCAAACACCATTCTACTTT...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGAAAGTAGAATGGTGTTaGCCAGGGGCTGGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVKVEWC*PGAGGW
Trigger: CCAACCCCCAGCCCCTGGCAAACACCATTCTACTTT...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp AATAATTGGGTTAAAGTACAGGGCCCAGTAAAACAAACAGTTGCAAACAAACTGAGCCGCCGGAGTTCCTaGACCACAAGATCAATGTTA +
Preference number: 5 (lower is better)
Translates to: NNWVKVQGPVKQTVANKLSRRSS*TTRSML
Trigger: TAACATTGATCTTGTGGTCAAGGAACTCCGGCGGCT...CAGTTTGTTTGCAACTGTTTGTTTTACTGGGCCCTGTACTTTAACCCAATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp ATCTCAAGAAAGCTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTTGCTCGTGTGTCAGAAGACTTaGCTCCTCACCTTCCATTTA +
Preference number: 5 (lower is better)
Translates to: ISRKLFSKMSTVCQKTLLVCQKT*LLTFHL
Trigger: TAAATGGAAGGTGAGGAGCAAAGTCTTCTGACACAC...GAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAGCTTTCTTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAATGCAGTGGCATGATCTaGGCTCATTGTAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: TLFVNTLKTMDCALQTCECSGMI*AHCNLH
Trigger: GTGGAGGTTACAATGAGCCAAGATCATGCCACTGCA...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp AGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTTTTGGGGAGAGGACATGGTaGGAGCTTTTGATATACAAA +
Preference number: 5 (lower is better)
Translates to: SDYKSNHHSRLKLNPLSFGERTW*ELLIYK
Trigger: TTTGTATATCAAAAGCTCCAACCATGTCCTCTCCCC...AAAACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CAA 90 bp AATAATTGGGTTAAAGTACAGGGCCCAGTAAAACAAACAGTTGCAAACAAACTGGGGGAGAGGACATGGTaGGAGCTTTTGATATACAAA +
Preference number: 5 (lower is better)
Translates to: NNWVKVQGPVKQTVANKLGERTW*ELLIYK
Trigger: TTTGTATATCAAAAGCTCCAACCATGTCCTCTCCCC...CAGTTTGTTTGCAACTGTTTGTTTTACTGGGCCCTGTACTTTAACCCAATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566710.1
ENST00000631651.1
CDS-3UTR CAA 90 bp CCCAGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTCTCAAACTGAATCCTTaGAGTTTTACTCTGAATCCT +
Preference number: 5 (lower is better)
Translates to: PSDYKSNHHSRLKLNPLSLKLNP*SFTLNP
Trigger: AGGATTCAGAGTAAAACTCAAAGGATTCAGTTTGAG...ACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CAA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAAGTGTGTCAGAAGACTTaGCTCCTCACCTTCCATTTA +
Preference number: 5 (lower is better)
Translates to: TLFVNTLKTMDCALQTCEVCQKT*LLTFHL
Trigger: TAAATGGAAGGTGAGGAGCAAAGTCTTCTGACACAC...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp AATCACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTCTCTCTCTCTCTTTTaGAGATGGAGTCTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: NHTICEHIKNHGLCTSNVSLSLF*RWSLAL
Trigger: CAAGGCAAGACTCCATCTCAAAAAGAGAGAGAGAGA...CACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp ACACTATTTGTGAACACATTAAAAACCATGGATTGTGCACTTCAAACGTGTGAAAGGAGAATACTGACTTaGGGGAAACCTTCCCATTTT +
Preference number: 5 (lower is better)
Translates to: TLFVNTLKTMDCALQTCERRILT*GKPSHF
Trigger: AAAATGGGAAGGTTTCCCCAAAGTCAGTATTCTCCT...TTCACACGTTTGAAGTGCACAATCCATGGTTTTTAATGTGTTCACAAATAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000562442.5
ENST00000632966.1
CDS-3UTR CAA 90 bp TCACTTCATGCCATATTTATAACTATAGCGCTTGGTGTAATTATACCTGCTGTAACATGGTTGGAGCTTTaGATATACAAAGCAGCACCT +
Preference number: 5 (lower is better)
Translates to: SLHAIFITIALGVIIPAVTWLEL*IYKAAP
Trigger: AGGTGCTGCTTTGTATATCAAAAGCTCCAACCATGT...TACAGCAGGTATAATTACACCAAGCGCTATAGTTATAAATATGGCATGAAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS-3UTR CAA 90 bp AGTGACTACAAGTCTAACCATCATTCTAGGCTCAAACTGAATCCTTTGAGTTTTTTACAAAACATTTCCTaGAACAAAACGACTATCCCG +
Preference number: 5 (lower is better)
Translates to: SDYKSNHHSRLKLNPLSFLQNIS*NKTTIP
Trigger: CGGGATAGTCGTTTTGTTCAAGGAAATGTTTTGTAA...AAAACTCAAAGGATTCAGTTTGAGCCTAGAATGATGGTTAGACTTGTAGTCACT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261658.7
ENST00000619034.2
CDS CCA 72 bp GACGCAGGCGAGGCCCAGCGACCGGCTGTGCGGACGTaGGGCTCTCGGGAAGGGATAGCGCAGTTGGCCAAG +
Preference number: 6 (lower is better)
Translates to: DAGEAQRPAVRT*GSREGIAQLAK
Trigger: CTTGGCCAACTGCGCTATCCCTTCCCGAGAGCCCCACGTCCGCACAGCCGGTCGCTGGGCCTCGCCTGCGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570219.1
ENST00000634109.1
CDS CCA 72 bp TCTGGTCCGGCTGTTGCAGGGTGTGGCAAGCGCTCCTaGCGGGCAGGCGCCCCGTGGTTCCCCTCCAAGGTG +
Preference number: 6 (lower is better)
Translates to: SGPAVAGCGKRS*RAGAPWFPSKV
Trigger: CACCTTGGAGGGGAACCACGGGGCGCCTGCCCGCCAGGAGCGCTTGCCACACCCTGCAACAGCCGGACCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000570219.1
ENST00000634109.1
CDS CCA 72 bp GGCGCTTCTCATGACCACACCCAGGAGTCCGGGCCCTaGGCCTTTTCTGGGTGCTGGGAAGAGCATGGCTGC +
Preference number: 6 (lower is better)
Translates to: GASHDHTQESGP*AFSGCWEEHGC
Trigger: GCAGCCATGCTCTTCCCAGCACCCAGAAAAGGCCCAGGGCCCGGACTCCTGGGTGTGGTCATGAGAAGCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563082.1
ENST00000631725.1
CDS GCA 72 bp GACTATCAGAAGCCTCATCAATTCTGGTCCGGCTGTTaGAGGGTGTGGCAAGCGCTCCTGGCGGGCAGGCGC +
Preference number: 6 (lower is better)
Translates to: DYQKPHQFWSGC*RVWQALLAGRR
Trigger: GCGCCTGCCCGCCAGGAGCGCTTGCCACACCCTGCAACAGCCGGACCAGAATTGATGAGGCTTCTGATAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570219.1
ENST00000634109.1
CDS CAA 90 bp GGGCCCAGCTGCTCCAGCCAGAGGACAACTTCTTCCGCCGTCCATTaGGCCACAGCCTTGTGGACCAGGAGGTCGTGTTCAGATTCCCTG +
Preference number: 6 (lower is better)
Translates to: GPSCSSQRTTSSAVH*ATALWTRRSCSDSL
Trigger: CAGGGAATCTGAACACGACCTCCTGGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAGAAGTTGTCCTCTGGCTGGAGCAGCTGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261658.7
ENST00000562442.5
ENST00000566520.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632966.1
ENST00000634058.1
CDS CCA 72 bp GCTCCAGCCAGAGGACAACTTCTTCCGCCGTCCATTTaGCCACAGCCTTGTGGACCAGGAGGTCGTGTTCAG +
Preference number: 6 (lower is better)
Translates to: APARGQLLPPSI*PQPCGPGGRVQ
Trigger: CTGAACACGACCTCCTGGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAGAAGTTGTCCTCTGGCTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261658.7
ENST00000562442.5
ENST00000566520.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632966.1
ENST00000634058.1
CDS CCA 72 bp GGACATGACCTACAGGGAGCTTCTTTGCCCCCACACTaGGCAAGGCCTCCCTGTGACAGCCTCAACTTCACC +
Preference number: 6 (lower is better)
Translates to: GHDLQGASLPPH*ARPPCDSLNFT
Trigger: GGTGAAGTTGAGGCTGTCACAGGGAGGCCTTGCCCAGTGTGGGGGCAAAGAAGCTCCCTGTAGGTCATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563082.1
ENST00000631725.1
CDS GCA 72 bp CAGCCTTGTGGACCAGGAGGTCGTGTTCAGATTCCCTaGTGCTCCAGTGATAGACGAGCAGGACCACTGCCA +
Preference number: 6 (lower is better)
Translates to: QPCGPGGRVQIP*CSSDRRAGPLP
Trigger: TGGCAGTGGTCCTGCTCGTCTATCACTGGAGCAGCAGGGAATCTGAACACGACCTCCTGGTCCACAAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261658.7
ENST00000562442.5
ENST00000619034.2
ENST00000632966.1
CDS GCA 72 bp CAGCCTTGTGGACCAGGAGGTCGTGTTCAGATTCCCTaGTGCTCCAGTGATAGACGAGCAGGACCACCTGAG +
Preference number: 6 (lower is better)
Translates to: QPCGPGGRVQIP*CSSDRRAGPPE
Trigger: CTCAGGTGGTCCTGCTCGTCTATCACTGGAGCAGCAGGGAATCTGAACACGACCTCCTGGTCCACAAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000566520.5
ENST00000566710.1
ENST00000631651.1
ENST00000634058.1
CDS CCA 72 bp ACTCAGCGTGGCGACTATCAGAAGCCTCATCAATTCTaGTCCGGCTGTTGCAGGGTGTGGCAAGCGCTCCTG +
Preference number: 6 (lower is better)
Translates to: TQRGDYQKPHQF*SGCCRVWQALL
Trigger: CAGGAGCGCTTGCCACACCCTGCAACAGCCGGACCAGAATTGATGAGGCTTCTGATAGTCGCCACGCTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570219.1
ENST00000634109.1
CDS CAA 72 bp TGCTCCAGCCAGAGGACAACTTCTTCCGCCGTCCATTaGGCCACAGCCTTGTGGACCAGGAGGTCGTGTTCA +
Preference number: 6 (lower is better)
Translates to: CSSQRTTSSAVH*ATALWTRRSCS
Trigger: TGAACACGACCTCCTGGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAGAAGTTGTCCTCTGGCTGGAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261658.7
ENST00000562442.5
ENST00000566520.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632966.1
ENST00000634058.1
CDS GCA 72 bp TTAACTCTCAAGGACATGACCTACAGGGAGCTTCTTTaGCCCCACACTGGGCAAGGCCTCCCTGTGACAGCC +
Preference number: 6 (lower is better)
Translates to: LTLKDMTYRELL*PHTGQGLPVTA
Trigger: GGCTGTCACAGGGAGGCCTTGCCCAGTGTGGGGGCAAAGAAGCTCCCTGTAGGTCATGTCCTTGAGAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563082.1
ENST00000631725.1
CDS CAA 72 bp AGGACAACTTCTTCCGCCGTCCATTTGGCCACAGCCTaGTGGACCAGGAGGTCGTGTTCAGATTCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: RTTSSAVHLATA*WTRRSCSDSLL
Trigger: CAGCAGGGAATCTGAACACGACCTCCTGGTCCACAAGGCTGTGGCCAAATGGACGGCGGAAGAAGTTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261658.7
ENST00000562442.5
ENST00000566520.5
ENST00000566710.1
ENST00000619034.2
ENST00000631651.1
ENST00000632966.1
ENST00000634058.1
CDS TCA 72 bp AGCTTCTTTGCCCCCACACTGGGCAAGGCCTCCCTGTaGCAGCCTCAACTTCACCTGCTTCATCACTTTGTT +
Preference number: 6 (lower is better)
Translates to: SFFAPTLGKASL*QPQLHLLHHFV
Trigger: AACAAAGTGATGAAGCAGGTGAAGTTGAGGCTGTCACAGGGAGGCCTTGCCCAGTGTGGGGGCAAAGAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563082.1
ENST00000631725.1
CDS CAA 72 bp CTGTTTTCTAAAATGTCCACGGTGTGTCAGAAGACTTaGCTCCTCACCTTCCATTTACTCGTTCAGATAAAA +
Preference number: 6 (lower is better)
Translates to: LFSKMSTVCQKT*LLTFHLLVQIK
Trigger: TTTTATCTGAACGAGTAAATGGAAGGTGAGGAGCAAAGTCTTCTGACACACCGTGGACATTTTAGAAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562442.5
ENST00000566520.5
ENST00000632966.1
ENST00000634058.1
CDS TCA 72 bp TTCTCTCACTTGGTATTTCTTTCCCATCCCCTGTTGTaGCAACCATTAAAACATACTTACTTCAGTTCACTT +
Preference number: 6 (lower is better)
Translates to: FSHLVFLSHPLL*QPLKHTYFSSL
Trigger: AAGTGAACTGAAGTAAGTATGTTTTAATGGTTGTCACAACAGGGGATGGGAAAGAAATACCAAGTGAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564078.1
ENST00000634083.1