RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BET1L (Homo sapiens)

Ensembl gene IDs: ENSG00000177951

Ensembl transcript IDs: ENST00000325147.13, ENST00000332865.10, ENST00000382762.7, ENST00000410108.5, ENST00000479463.1, ENST00000486280.1, ENST00000529614.6

Found 409 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTGCAAGCCACAGGTGGCCACGTCTGGGATTCACCAGCTGCTCTaGTCAGACCTGGCTTCTCCAGACACGCTGTGGCCCCAGCTCTGC +
Preference number: 1 (lower is better)
Translates to: GCKPQVATSGIHQLL*SDLASPDTLWPQLC
Trigger: GCAGAGCTGGGGCCACAGCGTGTCTGGAGAAGCCAGGTCTGAGCAGAGCAGCTGGTGAATCCCAGACGTGGCCACCTGTGGCTTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 90 bp GCCATGGCAGCCAAGGACACTGGTGCCGGAGGAACGACAGGGGCCTaGAAAGGGACATCCGAGGAGGGGGAAGCAAGCTGGGAGCAAGAC +
Preference number: 1 (lower is better)
Translates to: AMAAKDTGAGGTTGA*KGTSEEGEASWEQD
Trigger: GTCTTGCTCCCAGCTTGCTTCCCCCTCCTCGGATGTCCCTTTGCAGGCCCCTGTCGTTCCTCCGGCACCAGTGTCCTTGGCTGCCATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 90 bp AGAAGGGCTGCAAGCCACAGGTGGCCACGTCTGGGATTCACCAGCTaGTCTGCTCAGACCTGGCTTCTCCAGACACGCTGTGGCCCCAGC +
Preference number: 1 (lower is better)
Translates to: RRAASHRWPRLGFTS*SAQTWLLQTRCGPS
Trigger: GCTGGGGCCACAGCGTGTCTGGAGAAGCCAGGTCTGAGCAGAGCAGCTGGTGAATCCCAGACGTGGCCACCTGTGGCTTGCAGCCCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 90 bp CCTCCACTGGTCTGCCCATGCTCAGCAACCATGGCCAGGAGTAACTaGCATCTCCAGGGTGAGAAGCCTCGGTCGGAGGAGATGACACCC +
Preference number: 1 (lower is better)
Translates to: PPLVCPCSATMARSN*HLQGEKPRSEEMTP
Trigger: GGGTGTCATCTCCTCCGACCGAGGCTTCTCACCCTGGAGATGGCAGTTACTCCTGGCCATGGTTGCTGAGCATGGGCAGACCAGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR TCA 90 bp TGGTTTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATaGGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACAGG +
Preference number: 1 (lower is better)
Translates to: WFPRESPFHTWDQPT*AHQVTGSRSLLPHR
Trigger: CCTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
3UTR CCA 90 bp CTGAGCTGGAGGGTTAGGGTCAGGGCCCCTCAGGAAACTCTGGTCTaGCACAGCAGCAGCAGGGATGCCACTCTCCCTTTGTGGAATCCT +
Preference number: 1 (lower is better)
Translates to: LSWRVRVRAPQETLV*HSSSRDATLPLWNP
Trigger: AGGATTCCACAAAGGGAGAGTGGCATCCCTGCTGCTGCTGTGCCAGACCAGAGTTTCCTGAGGGGCCCTGACCCTAACCCTCCAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 90 bp ACCTTGGATCACAGACATGGCCTCACCCAGACAAGGACACGACCGTaGAGCCTTAAGATGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTG +
Preference number: 1 (lower is better)
Translates to: TLDHRHGLTQTRTRP*SLKMSESQARGEGL
Trigger: CAGCCCTTCTCCCCGCGCTTGGGACTCTGACATCTTAAGGCTGCACGGTCGTGTCCTTGTCTGGGTGAGGCCATGTCTGTGATCCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 90 bp GAAGGCGCAGATAACACAGTAGGGTGGCCTCCACTGGTCTGCCCATaGTCAGCAACCATGGCCAGGAGTAACTGCCATCTCCAGGGTGAG +
Preference number: 1 (lower is better)
Translates to: EGADNTVGWPPLVCP*SATMARSNCHLQGE
Trigger: CTCACCCTGGAGATGGCAGTTACTCCTGGCCATGGTTGCTGAGCATGGGCAGACCAGTGGAGGCCACCCTACTGTGTTATCTGCGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 90 bp CCCCAAGGGTCTCACTTCATCGAAGGCGCAGATAACACAGTAGGGTaGCCTCCACTGGTCTGCCCATGCTCAGCAACCATGGCCAGGAGT +
Preference number: 1 (lower is better)
Translates to: PQGSHFIEGADNTVG*PPLVCPCSATMARS
Trigger: ACTCCTGGCCATGGTTGCTGAGCATGGGCAGACCAGTGGAGGCCACCCTACTGTGTTATCTGCGCCTTCGATGAAGTGAGACCCTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 90 bp TGGACCCCACTCCTCCAGGAGGCTGACAGTCTCAGCCAGGTACAATaGAGGGTCCAGGTCACAAGGAAGGGGGCTATGGTGAGCATGGAT +
Preference number: 1 (lower is better)
Translates to: WTPLLQEADSLSQVQ*RVQVTRKGAMVSMD
Trigger: ATCCATGCTCACCATAGCCCCCTTCCTTGTGACCTGGACCCTCCATTGTACCTGGCTGAGACTGTCAGCCTCCTGGAGGAGTGGGGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR TCA 90 bp GGAGTAACTGCCATCTCCAGGGTGAGAAGCCTCGGTCGGAGGAGATaGCACCCACTTAGGGTTCACAGCCCCTTCCTGTGTCAGTTCCAG +
Preference number: 1 (lower is better)
Translates to: GVTAISRVRSLGRRR*HPLRVHSPFLCQFQ
Trigger: CTGGAACTGACACAGGAAGGGGCTGTGAACCCTAAGTGGGTGTCATCTCCTCCGACCGAGGCTTCTCACCCTGGAGATGGCAGTTACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 90 bp TGCTCCTGGATACACAGTCACATGACCCAGAAGATCCCAGCCCAGTaGCTAGGCCAAGGCTGCAGTCCACTCCTTCATCCACAGCCCGTT +
Preference number: 1 (lower is better)
Translates to: CSWIHSHMTQKIPAQ*LGQGCSPLLHPQPV
Trigger: AACGGGCTGTGGATGAAGGAGTGGACTGCAGCCTTGGCCTAGCCACTGGGCTGGGATCTTCTGGGTCATGTGACTGTGTATCCAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 90 bp GACCTCATCTTGAGGTGGGAAGAAGTCGTTGCCCTGCCAGTCCAGTaGTTTGAACATGAATCCAGCCCAGTGGACAGGGAAGGCCCAGGG +
Preference number: 1 (lower is better)
Translates to: DLILRWEEVVALPVQ*FEHESSPVDREGPG
Trigger: CCCTGGGCCTTCCCTGTCCACTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTCTTCCCACCTCAAGATGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR TCA 90 bp ACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGTACAGGGCTaGGCTGGAGGGTTAGGGTCAGGGCCCCTCAGGAAACTCTGGTCT +
Preference number: 1 (lower is better)
Translates to: TVSKPHSFTGSGVQG*AGGLGSGPLRKLWS
Trigger: AGACCAGAGTTTCCTGAGGGGCCCTGACCCTAACCCTCCAGCTCAGCCCTGTACACCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 90 bp TTCATCGAAGGCGCAGATAACACAGTAGGGTGGCCTCCACTGGTCTaGCCATGCTCAGCAACCATGGCCAGGAGTAACTGCCATCTCCAG +
Preference number: 1 (lower is better)
Translates to: FIEGADNTVGWPPLV*PCSATMARSNCHLQ
Trigger: CTGGAGATGGCAGTTACTCCTGGCCATGGTTGCTGAGCATGGGCAGACCAGTGGAGGCCACCCTACTGTGTTATCTGCGCCTTCGATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 90 bp CCACTTAGGGTTCACAGCCCCTTCCTGTGTCAGTTCCAGGAACCTTaGATCACAGACATGGCCTCACCCAGACAAGGACACGACCGTGCA +
Preference number: 1 (lower is better)
Translates to: PLRVHSPFLCQFQEP*ITDMASPRQGHDRA
Trigger: TGCACGGTCGTGTCCTTGTCTGGGTGAGGCCATGTCTGTGATCCAAGGTTCCTGGAACTGACACAGGAAGGGGCTGTGAACCCTAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 90 bp ATAGCCCTCACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTaGCCCTGCCTGCTTTGCCTGACTCTGAAATGCCAGACAGGCCCA +
Preference number: 1 (lower is better)
Translates to: IALTGTFLCRPTEAP*PCLLCLTLKCQTGP
Trigger: TGGGCCTGTCTGGCATTTCAGAGTCAGGCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGTGAGGGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 90 bp TGCTGGGTGAGAAGTGAGCTTGCACTGCATAGGGCAAGAAGAAGGTaGACCCCACTCCTCCAGGAGGCTGACAGTCTCAGCCAGGTACAA +
Preference number: 1 (lower is better)
Translates to: CWVRSELALHRARRR*TPLLQEADSLSQVQ
Trigger: TTGTACCTGGCTGAGACTGTCAGCCTCCTGGAGGAGTGGGGTCCACCTTCTTCTTGCCCTATGCAGTGCAAGCTCACTTCTCACCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR TCA 90 bp GCTGCAAACAGCCATGGAGATAAGAGAGGCGGGGAGGGAACACAGTaGCTGAGTCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCA +
Preference number: 1 (lower is better)
Translates to: AANSHGDKRGGEGTQ*LSLRDSKAPLQRKP
Trigger: TGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGACTCAGTCACTGTGTTCCCTCCCCGCCTCTCTTATCTCCATGGCTGTTTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 90 bp ACCTGCAGTGACCAGATGGAGATACAATGCAGGCAGCTGCTACCATaGTTGGTGACCAGGGTACAAGCCCCTGATGAGCTTGCCATGGCA +
Preference number: 1 (lower is better)
Translates to: TCSDQMEIQCRQLLP*LVTRVQAPDELAMA
Trigger: TGCCATGGCAAGCTCATCAGGGGCTTGTACCCTGGTCACCAAGCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 90 bp ACCAGCCCAGCTAGGTTTCAGGGCAACAGCAAAGCCCCAGAGACATaGAGGCAGATGAGTCAACCTTGCTGGGTGAGAAGTGAGCTTGCA +
Preference number: 1 (lower is better)
Translates to: TSPARFQGNSKAPET*RQMSQPCWVRSELA
Trigger: TGCAAGCTCACTTCTCACCCAGCAAGGTTGACTCATCTGCCTCCATGTCTCTGGGGCTTTGCTGTTGCCCTGAAACCTAGCTGGGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 90 bp GGCAACAGCAAAGCCCCAGAGACATGGAGGCAGATGAGTCAACCTTaGTGGGTGAGAAGTGAGCTTGCACTGCATAGGGCAAGAAGAAGG +
Preference number: 1 (lower is better)
Translates to: GNSKAPETWRQMSQP*WVRSELALHRARRR
Trigger: CCTTCTTCTTGCCCTATGCAGTGCAAGCTCACTTCTCACCCAGCAAGGTTGACTCATCTGCCTCCATGTCTCTGGGGCTTTGCTGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 90 bp GTTTGCATCAGCAAGATGAGCAGGCACCACCATGGAAAGAGCACCTaGGGTGTAGCTGGTTACCACAGCTCAGCCACATTCCCCAGAAAC +
Preference number: 1 (lower is better)
Translates to: VCISKMSRHHHGKST*GVAGYHSSATFPRN
Trigger: GTTTCTGGGGAATGTGGCTGAGCTGTGGTAACCAGCTACACCCCAGGTGCTCTTTCCATGGTGGTGCCTGCTCATCTTGCTGATGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 90 bp ACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTaGCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAA +
Preference number: 1 (lower is better)
Translates to: TSQHELIRSQAAAAS*HTGRRFLTHNYHCK
Trigger: TTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
3UTR CCA 90 bp GGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGTaGGAAGAAGTCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAA +
Preference number: 1 (lower is better)
Translates to: GVFMPRQGGEDLILR*EEVVALPVQWFEHE
Trigger: TTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTCTTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR TCA 90 bp TTAAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTaGGGTGGGAAGAAGTCGTTGCCCTGCCAGTCCAGTGGTTTGAAC +
Preference number: 1 (lower is better)
Translates to: LKVFLCQDKGARTSS*GGKKSLPCQSSGLN
Trigger: GTTCAAACCACTGGACTGGCAGGGCAACGACTTCTTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR GCA 90 bp GGCCAAGGCTGCAGTCCACTCCTTCATCCACAGCCCGTTCTCCCCAAGGGTCTCGCAGCCGCAGCCTCCTaGCACACAGGAAGAAGATTC +
Preference number: 2 (lower is better)
Translates to: GQGCSPLLHPQPVLPKGLAAAAS*HTGRRF
Trigger: GAATCTTCTTCCTGTGTGGCAGGAGGCTGCGGCTGC...GAGACCCTTGGGGAGAACGGGCTGTGGATGAAGGAGTGGACTGCAGCCTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp ATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACAGGAAGAAGATAGGCAGGGAAGACCCTaGCTGCCCTTGGCACCCACA +
Preference number: 2 (lower is better)
Translates to: MSSSGHRQPQPPATQEEDRQGRP*LPLAPT
Trigger: TGTGGGTGCCAAGGGCAGCCAGGGTCTTCCCTGCCT...ATCTTCTTCCTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
3UTR-3UTR CCA 90 bp CTCATTTACAGGGTCAGGTGTACAGGGCTGAGCTGGAGGGTTAGGGTCAGGGCCGCATCCTGCAGAGGCTaGGGACAAGGAGGATGGCAC +
Preference number: 2 (lower is better)
Translates to: LIYRVRCTGLSWRVRVRAASCRG*GQGGWH
Trigger: GTGCCATCCTCCTTGTCCCCAGCCTCTGCAGGATGC...GGCCCTGACCCTAACCCTCCAGCTCAGCCCTGTACACCTGACCCTGTAAATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp ACCAGGGTACAAGCCCCTGATGAGCTTGCCATGGCAGCCAAGGACACTGGTGCCGGTAGGCTTGCTGTGTaGAAGGAAGGAGGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: TRVQAPDELAMAAKDTGAGRLAV*KEGGGE
Trigger: CTCCCCTCCTCCTTCCTTCCACACAGCAAGCCTACC...GGCACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAGGGGCTTGTACCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CAA 90 bp GGAGGTCAGCCCTCCATGGCCCAGGAAAACATGGGGGATGAAGGGTaGGCACCTGCAGTGACCAGATGGAGATACAATGCAGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: GGQPSMAQENMGDEG*APAVTRWRYNAGSC
Trigger: GCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGTGCCAACCCTTCATCCCCCATGTTTTCCTGGGCCATGGAGGGCTGACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR TCA 90 bp CTCATTTACAGGGTCAGGTGTACAGGGCTGAGCTGGAGGGTTAGGGTCAGGGCCCTCGGTCGGAGGAGATaGCACCCACTTAGGGTTCAC +
Preference number: 2 (lower is better)
Translates to: LIYRVRCTGLSWRVRVRALGRRR*HPLRVH
Trigger: GTGAACCCTAAGTGGGTGTCATCTCCTCCGACCGAG...GGCCCTGACCCTAACCCTCCAGCTCAGCCCTGTACACCTGACCCTGTAAATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR GCA 90 bp ACCAGGGTACAAGCCCCTGATGAGCTTGCCATGGCAGCCAAGGACACTGGTGCCTGGCTAGGCCAAGGCTaGAGTCCACTCCTTCATCCA +
Preference number: 2 (lower is better)
Translates to: TRVQAPDELAMAAKDTGAWLGQG*SPLLHP
Trigger: TGGATGAAGGAGTGGACTGCAGCCTTGGCCTAGCCA...GGCACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAGGGGCTTGTACCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp ACCAGGGTACAAGCCCCTGATGAGCTTGCCATGGCAGCCAAGGACACTGGTGCCTGCTCTGCTCAGACCTaGCTTCTCCAGACACGCTGT +
Preference number: 2 (lower is better)
Translates to: TRVQAPDELAMAAKDTGACSAQT*LLQTRC
Trigger: ACAGCGTGTCTGGAGAAGCCAGGTCTGAGCAGAGCA...GGCACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAGGGGCTTGTACCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp TGGGGTGTAGCTGGTTACCACAGCTCAGCCACATTCCCCAGAAACGGAGGTCAGGAGTCTGGCAGGGCTTaGCGGAGGCGCCAAAGTTAC +
Preference number: 2 (lower is better)
Translates to: WGVAGYHSSATFPRNGGQESGRA*RRRQSY
Trigger: GTAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTC...CTGACCTCCGTTTCTGGGGAATGTGGCTGAGCTGTGGTAACCAGCTACACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp TGGGGTGTAGCTGGTTACCACAGCTCAGCCACATTCCCCAGAAACGGAGGTCAGGCATCCTGCAGAGGCTaGGGACAAGGAGGATGGCAC +
Preference number: 2 (lower is better)
Translates to: WGVAGYHSSATFPRNGGQASCRG*GQGGWH
Trigger: GTGCCATCCTCCTTGTCCCCAGCCTCTGCAGGATGC...CTGACCTCCGTTTCTGGGGAATGTGGCTGAGCTGTGGTAACCAGCTACACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR GCA 90 bp ACTGAGTCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCGGAACGACAGGGGCCTaGAAAGGGACATCCGAGGAG +
Preference number: 2 (lower is better)
Translates to: TESERQQSTSPAKATPRCGTTGA*KGTSEE
Trigger: CTCCTCGGATGTCCCTTTGCAGGCCCCTGTCGTTCC...GCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGACTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CAA 90 bp TGCAGTGACCAGATGGAGATACAATGCAGGCAGCTGCTACCATGCTaGGTGACCAGGGTACAAGCCCCTGATGAGCTTGCCATGGCAGCC +
Preference number: 2 (lower is better)
Translates to: CSDQMEIQCRQLLPC*VTRVQAPDELAMAA
Trigger: GGCTGCCATGGCAAGCTCATCAGGGGCTTGTACCCTGGTCACCAAGCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR TCA 90 bp CAACAGCAAAGCCCCAGAGACATGGAGGCAGATGAGTCAACCTTGCTGGGTGAGCTCGGTCGGAGGAGATaGCACCCACTTAGGGTTCAC +
Preference number: 2 (lower is better)
Translates to: QQQSPRDMEADESTLLGELGRRR*HPLRVH
Trigger: GTGAACCCTAAGTGGGTGTCATCTCCTCCGACCGAG...CTCACCCAGCAAGGTTGACTCATCTGCCTCCATGTCTCTGGGGCTTTGCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR TCA 90 bp GGCACCTGCAGTGACCAGATGGAGATACAATGCAGGCAGCTGCTACCATGCTTGACTCCTCCAGGAGGCTaGCAGTCTCAGCCAGGTACA +
Preference number: 2 (lower is better)
Translates to: GTCSDQMEIQCRQLLPCLTPPGG*QSQPGT
Trigger: TGTACCTGGCTGAGACTGTCAGCCTCCTGGAGGAGT...CAAGCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGTGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR GCA 90 bp TCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCAGCCTAGCAGCCGCAGCCTCCTaGCACACAGGAAGAAGATTC +
Preference number: 2 (lower is better)
Translates to: SERQQSTSPAKATPRCSLAAAAS*HTGRRF
Trigger: GAATCTTCTTCCTGTGTGGCAGGAGGCTGCGGCTGC...TAGGCTGCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR GCA 90 bp CTCATTTACAGGGTCAGGTGTACAGGGCTGAGCTGGAGGGTTAGGGTCAGGGCCATTCACCAGCTGCTCTaGTCAGACCTGGCTTCTCCA +
Preference number: 2 (lower is better)
Translates to: LIYRVRCTGLSWRVRVRAIHQLL*SDLASP
Trigger: TGGAGAAGCCAGGTCTGAGCAGAGCAGCTGGTGAAT...GGCCCTGACCCTAACCCTCCAGCTCAGCCCTGTACACCTGACCCTGTAAATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp CTTCATCCACAGCCCGTTCTCCCCAAGGGTCTCACTTCATCGAAGGCGCAGATAACAGGTGGCCACGTCTaGGATTCACCAGCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: LHPQPVLPKGLTSSKAQITGGHV*DSPAAL
Trigger: CAGAGCAGCTGGTGAATCCCAGACGTGGCCACCTGT...TATCTGCGCCTTCGATGAAGTGAGACCCTTGGGGAGAACGGGCTGTGGATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp TCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCAGCCTACACCTGGGGTGTAGCTaGTTACCACAGCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: SERQQSTSPAKATPRCSLHLGCS*LPQLSH
Trigger: GTGGCTGAGCTGTGGTAACCAGCTACACCCCAGGTG...TAGGCTGCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR TCA 90 bp AAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGTGGGAACTGCCATCTCCAGGGTaGGAAGCCTCGGTCGGAGGA +
Preference number: 2 (lower is better)
Translates to: KGVFMPRQGGEDLILRWELPSPG*EASVGG
Trigger: TCCTCCGACCGAGGCTTCTCACCCTGGAGATGGCAG...TTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR GCA 90 bp TCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCAGCCTATGGCCCTGCCTGCTTTaGCTGACTCTGAAATGCCAG +
Preference number: 2 (lower is better)
Translates to: SERQQSTSPAKATPRCSLWPCLL*LTLKCQ
Trigger: CTGGCATTTCAGAGTCAGGCAAAGCAGGCAGGGCCA...TAGGCTGCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp GTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGTACAGAGGCAGGGAAGACCCTaGCTGCCCTTGGCACCCACA +
Preference number: 2 (lower is better)
Translates to: VSGITVSKPHSFTGSGVQRQGRP*LPLAPT
Trigger: TGTGGGTGCCAAGGGCAGCCAGGGTCTTCCCTGCCT...CTGTACACCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp TGGGGTGTAGCTGGTTACCACAGCTCAGCCACATTCCCCAGAAACGGAGGTCAGCTTGGATCACAGACATaGCCTCACCCAGACAAGGAC +
Preference number: 2 (lower is better)
Translates to: WGVAGYHSSATFPRNGGQLGSQT*PHPDKD
Trigger: GTCCTTGTCTGGGTGAGGCCATGTCTGTGATCCAAG...CTGACCTCCGTTTCTGGGGAATGTGGCTGAGCTGTGGTAACCAGCTACACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CAA 90 bp AAGGCCACAATTAGACCCACGGCCATGCCACATAGAAGCTTCCGGTaGTCTTGTCCGGACCTTGCCATTGTGGAAAAGCGCTTCACGCTC +
Preference number: 2 (lower is better)
Translates to: KATIRPTAMPHRSFR*SCPDLAIVEKRFTL
Trigger: GAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATGTGGCATGGCCGTGGGTCTAATTGTGGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325147.13
3UTR-3UTR GCA 90 bp ACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTTGCGTCTTGTCCGGACCTTaGCATTGTGGAAAAGCGCTT +
Preference number: 2 (lower is better)
Translates to: TGTFLCRPTEAPWPCLLCVLSGP*HCGKAL
Trigger: AAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGAC...GCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325147.13
3UTR-3UTR GCA 90 bp CTCATTTACAGGGTCAGGTGTACAGGGCTGAGCTGGAGGGTTAGGGTCAGGGCCCAGATGAGTCAACCTTaGTGGGTGAGAAGTGAGCTT +
Preference number: 2 (lower is better)
Translates to: LIYRVRCTGLSWRVRVRAQMSQP*WVRSEL
Trigger: AAGCTCACTTCTCACCCAGCAAGGTTGACTCATCTG...GGCCCTGACCCTAACCCTCCAGCTCAGCCCTGTACACCTGACCCTGTAAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp GTTGGCACCTGCAGTGACCAGATGGAGATACAATGCAGGCAGCTGCTACCATGCCTCACGTCCTTGCCCTaGACAAGAAGTAGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: VGTCSDQMEIQCRQLLPCLTSLP*TRSRRG
Trigger: TCCTCTCCTACTTCTTGTCCAGGGCAAGGACGTGAG...GCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGTGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325147.13
3UTR-3UTR CCA 90 bp GTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGTACAGGAGTCTGGCAGGGCTTaGCGGAGGCGCCAAAGTTAC +
Preference number: 2 (lower is better)
Translates to: VSGITVSKPHSFTGSGVQESGRA*RRRQSY
Trigger: GTAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTC...CTGTACACCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp ACTGAGTCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCTGGGGACAAGGAGGATaGCACAGAATGCCATCACAG +
Preference number: 2 (lower is better)
Translates to: TESERQQSTSPAKATPRCWGQGG*HRMPSQ
Trigger: CTGTGATGGCATTCTGTGCCATCCTCCTTGTCCCCA...GCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGACTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp CAGCAGCAGCAGGGATGCCACTCTCCCTTTGTGGAATCCTTCTTAATACAAGAGGCAGGCATCAGGCTGTaGCTGATCTGTGGTCAGCCT +
Preference number: 2 (lower is better)
Translates to: QQQQGCHSPFVESFLIQEAGIRL*LICGQP
Trigger: AGGCTGACCACAGATCAGCCACAGCCTGATGCCTGC...CTCTTGTATTAAGAAGGATTCCACAAAGGGAGAGTGGCATCCCTGCTGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp GGTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGTACACACCTGGGGTGTAGCTaGTTACCACAGCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: GVRDYSQQTPLIYRVRCTHLGCS*LPQLSH
Trigger: GTGGCTGAGCTGTGGTAACCAGCTACACCCCAGGTG...TGTACACCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR TCA 90 bp AATTATGGGATACAGCCTAGCAGTTTGTCCTCACTTGGCAGAGTAGGTAACCCTGCATCAGGCTGTGGCTaGTCTGTGGTCAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: NYGIQPSSLSSLGRVGNPASGCG*SVVSLE
Trigger: CTCCAGGCTGACCACAGATCAGCCACAGCCTGATGC...AGGGTTACCTACTCTGCCAAGTGAGGACAAACTGCTAGGCTGTATCCCATAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR GCA 90 bp AAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGTGGGAACTGGGATTCACCAGCTaGTCTGCTCAGACCTGGCTT +
Preference number: 2 (lower is better)
Translates to: KGVFMPRQGGEDLILRWELGFTS*SAQTWL
Trigger: AAGCCAGGTCTGAGCAGAGCAGCTGGTGAATCCCAG...TTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp GGTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGTACAGATAACACAGTAGGGTaGCCTCCACTGGTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: GVRDYSQQTPLIYRVRCTDNTVG*PPLVCP
Trigger: TGGGCAGACCAGTGGAGGCCACCCTACTGTGTTATC...TGTACACCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR GCA 90 bp TTTACTGGTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGGCTAGGCCAAGGCTaGAGTCCACTCCTTCATCCA +
Preference number: 2 (lower is better)
Translates to: FTGVRDYSQQTPLIYRVRWLGQG*SPLLHP
Trigger: TGGATGAAGGAGTGGACTGCAGCCTTGGCCTAGCCA...CCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACACCAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp AAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGTGGGAAGCCCTGCCAGTCCAGTaGTTTGAACATGAATCCAGC +
Preference number: 2 (lower is better)
Translates to: KGVFMPRQGGEDLILRWEALPVQ*FEHESS
Trigger: GCTGGATTCATGTTCAAACCACTGGACTGGCAGGGC...TTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CCA 90 bp AATTATGGGATACAGCCTAGCAGTTTGTCCTCACTTGGCAGAGTAGGTAACCCTGCTGTGGCTGATCTGTaGTCAGCCTGGAGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: NYGIQPSSLSSLGRVGNPAVADL*SAWSSE
Trigger: CTCTGAGCTCCAGGCTGACCACAGATCAGCCACAGC...AGGGTTACCTACTCTGCCAAGTGAGGACAAACTGCTAGGCTGTATCCCATAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CAA 90 bp TTTAAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTaGAGGTGGGAAGAAGTCGTTGCCCTGCCAGTCCAGTGGTTTGAA +
Preference number: 2 (lower is better)
Translates to: FKGVFMPRQGGEDLI*RWEEVVALPVQWFE
Trigger: TTCAAACCACTGGACTGGCAGGGCAACGACTTCTTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR TCA 90 bp CAACAGCAAAGCCCCAGAGACATGGAGGCAGATGAGTCAACCTTGCTGGGTGAGCAGGAAGAAGATTCCTaGCCCACAATTATCATTGCA +
Preference number: 2 (lower is better)
Translates to: QQQSPRDMEADESTLLGEQEEDS*PTIIIA
Trigger: TGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTG...CTCACCCAGCAAGGTTGACTCATCTGCCTCCATGTCTCTGGGGCTTTGCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR TCA 90 bp GGGAAGAAGTCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGCTAGGTCTGTTCTCCTaGAAATACATCTTTGGTGCT +
Preference number: 2 (lower is better)
Translates to: GKKSLPCQSSGLNMNPAQLGLFS*KYIFGA
Trigger: AGCACCAAAGATGTATTTTCAGGAGAACAGACCTAG...CTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR GCA 90 bp GTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGTACAGACAAGGACACGACCGTaGAGCCTTAAGATGTCAGAG +
Preference number: 2 (lower is better)
Translates to: VSGITVSKPHSFTGSGVQTRTRP*SLKMSE
Trigger: CTCTGACATCTTAAGGCTGCACGGTCGTGTCCTTGT...CTGTACACCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR GCA 90 bp CTCAGAGGCAGTTCTGGATTGACAGGACATATGGTGTGGCCACACAGGTGGGGGAAAATACATCTTTGGTaGTGGGTAGATCCTGAATCC +
Preference number: 2 (lower is better)
Translates to: LRGSSGLTGHMVWPHRWGKIHLW*WVDPES
Trigger: GGATTCAGGATCTACCCAGCACCAAAGATGTATTTT...CCCCCACCTGTGTGGCCACACCATATGTCCTGTCAATCCAGAACTGCCTCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR GCA 90 bp CTCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTTTAGACCCACGGCCATaGCACATAGAAGCTTCCGGT +
Preference number: 2 (lower is better)
Translates to: LLPHRKKIPDPQLSLQRSLDPRP*HIEASG
Trigger: ACCGGAAGCTTCTATGTGGCATGGCCGTGGGTCTAA...ACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000332865.10
3UTR GCA 72 bp CCACAGGTGGCCACGTCTGGGATTCACCAGCTGCTCTaGTCAGACCTGGCTTCTCCAGACACGCTGTGGCCC +
Preference number: 3 (lower is better)
Translates to: PQVATSGIHQLL*SDLASPDTLWP
Trigger: GGGCCACAGCGTGTCTGGAGAAGCCAGGTCTGAGCAGAGCAGCTGGTGAATCCCAGACGTGGCCACCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CAA 90 bp ACCAGGGTACAAGCCCCTGATGAGCTTGCCATGGCAGCCAAGGACACTGGTGCCGGAGTCTGGCAGGGCTaGGCGGAGGCGCCAAAGTTA +
Preference number: 3 (lower is better)
Translates to: TRVQAPDELAMAAKDTGAGVWQG*AEAPKL
Trigger: TAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTCC...GGCACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAGGGGCTTGTACCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 72 bp GCAAGCCACAGGTGGCCACGTCTGGGATTCACCAGCTaGTCTGCTCAGACCTGGCTTCTCCAGACACGCTGT +
Preference number: 3 (lower is better)
Translates to: ASHRWPRLGFTS*SAQTWLLQTRC
Trigger: ACAGCGTGTCTGGAGAAGCCAGGTCTGAGCAGAGCAGCTGGTGAATCCCAGACGTGGCCACCTGTGGCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 72 bp GTCTGCCCATGCTCAGCAACCATGGCCAGGAGTAACTaGCATCTCCAGGGTGAGAAGCCTCGGTCGGAGGAG +
Preference number: 3 (lower is better)
Translates to: VCPCSATMARSN*HLQGEKPRSEE
Trigger: CTCCTCCGACCGAGGCTTCTCACCCTGGAGATGGCAGTTACTCCTGGCCATGGTTGCTGAGCATGGGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 72 bp GGTGGCCTCCACTGGTCTGCCCATGCTCAGCAACCATaGCCAGGAGTAACTGCCATCTCCAGGGTGAGAAGC +
Preference number: 3 (lower is better)
Translates to: GGLHWSAHAQQP*PGVTAISRVRS
Trigger: GCTTCTCACCCTGGAGATGGCAGTTACTCCTGGCCATGGTTGCTGAGCATGGGCAGACCAGTGGAGGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 72 bp AGGATGGCACAGAATGCCATCACAGCCAGGGGAGTCTaGCAGGGCTTGGCGGAGGCGCCAAAGTTACCAGCA +
Preference number: 3 (lower is better)
Translates to: RMAQNAITARGV*QGLAEAPKLPA
Trigger: TGCTGGTAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTCCCCTGGCTGTGATGGCATTCTGTGCCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CAA 90 bp CAGGGGAGTCTGGCAGGGCTTGGCGGAGGCGCCAAAGTTACCAGCAAGCTAGAACACTGGCTCACGTCCTaGCCCTGGACAAGAAGTAGG +
Preference number: 3 (lower is better)
Translates to: QGSLAGLGGGAKVTSKLEHWLTS*PWTRSR
Trigger: CCTACTTCTTGTCCAGGGCAAGGACGTGAGCCAGTG...TTCTAGCTTGCTGGTAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325147.13
3UTR TCA 72 bp CGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATaGGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTG +
Preference number: 3 (lower is better)
Translates to: RESPFHTWDQPT*AHQVTGSRSLL
Trigger: CAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
3UTR TCA 72 bp GCCATCTCCAGGGTGAGAAGCCTCGGTCGGAGGAGATaGCACCCACTTAGGGTTCACAGCCCCTTCCTGTGT +
Preference number: 3 (lower is better)
Translates to: AISRVRSLGRRR*HPLRVHSPFLC
Trigger: ACACAGGAAGGGGCTGTGAACCCTAAGTGGGTGTCATCTCCTCCGACCGAGGCTTCTCACCCTGGAGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 72 bp CACAGACATGGCCTCACCCAGACAAGGACACGACCGTaGAGCCTTAAGATGTCAGAGTCCCAAGCGCGGGGA +
Preference number: 3 (lower is better)
Translates to: HRHGLTQTRTRP*SLKMSESQARG
Trigger: TCCCCGCGCTTGGGACTCTGACATCTTAAGGCTGCACGGTCGTGTCCTTGTCTGGGTGAGGCCATGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 72 bp GGCGCAGATAACACAGTAGGGTGGCCTCCACTGGTCTaGCCATGCTCAGCAACCATGGCCAGGAGTAACTGC +
Preference number: 3 (lower is better)
Translates to: GADNTVGWPPLV*PCSATMARSNC
Trigger: GCAGTTACTCCTGGCCATGGTTGCTGAGCATGGGCAGACCAGTGGAGGCCACCCTACTGTGTTATCTGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 72 bp CTCCTCCAGGAGGCTGACAGTCTCAGCCAGGTACAATaGAGGGTCCAGGTCACAAGGAAGGGGGCTATGGTG +
Preference number: 3 (lower is better)
Translates to: LLQEADSLSQVQ*RVQVTRKGAMV
Trigger: CACCATAGCCCCCTTCCTTGTGACCTGGACCCTCCATTGTACCTGGCTGAGACTGTCAGCCTCCTGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CAA 90 bp AGGCTGCAGTCCACTCCTTCATCCACAGCCCGTTCTCCCCAAGGGTCTCACTTCGTCCGGACCTTGCCATaGTGGAAAAGCGCTTCACGC +
Preference number: 3 (lower is better)
Translates to: RLQSTPSSTARSPQGSHFVRTLP*WKSASR
Trigger: GCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGAC...GAAGTGAGACCCTTGGGGAGAACGGGCTGTGGATGAAGGAGTGGACTGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325147.13
3UTR-3UTR CAA 90 bp CCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACAGAAGCTTCCGGTTGTCTaGTCCGGACCTTGCCATTGT +
Preference number: 3 (lower is better)
Translates to: PANMSSSGHRQPQPPATQKLPVV*SGPCHC
Trigger: ACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTT...CTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000332865.10
3UTR GCA 72 bp CACCCACAGACACCAGCTCCCACTGGCTCACGTCCTTaGCCTGGACAAGAAGTAGGAGAGGATGAAGAAGGC +
Preference number: 3 (lower is better)
Translates to: HPQTPAPTGSRP*PGQEVGEDEEG
Trigger: GCCTTCTTCATCCTCTCCTACTTCTTGTCCAGGGCAAGGACGTGAGCCAGTGGGAGCTGGTGTCTGTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000332865.10
3UTR CCA 72 bp CAGGCACCACCATGGAAAGAGCACCTGGGGTGTAGCTaGTTACCACAGCTCAGCCACATTCCCCAGAAACGG +
Preference number: 3 (lower is better)
Translates to: QAPPWKEHLGCS*LPQLSHIPQKR
Trigger: CCGTTTCTGGGGAATGTGGCTGAGCTGTGGTAACCAGCTACACCCCAGGTGCTCTTTCCATGGTGGTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CAA 90 bp TCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTTGTCTTGTCCGGACCTaGCCATTGTGGAAAAGCGCT +
Preference number: 3 (lower is better)
Translates to: SHMGPANMSSSGHRQPQPCLVRT*PLWKSA
Trigger: AGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACA...AGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000332865.10
3UTR-3UTR CAA 90 bp CTCATTTACAGGGTCAGGTGTACAGGGCTGAGCTGGAGGGTTAGGGTCAGGGCCTGGAGAAAGGTAGGCTaGCTGTGTGGAAGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: LIYRVRCTGLSWRVRVRAWRKVG*LCGRKE
Trigger: CTCCTTCCTTCCACACAGCAAGCCTACCTTTCTCCA...GGCCCTGACCCTAACCCTCCAGCTCAGCCCTGTACACCTGACCCTGTAAATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR TCA 72 bp AAACCCCACTCATTTACAGGGTCAGGTGTACAGGGCTaGGCTGGAGGGTTAGGGTCAGGGCCCCTCAGGAAA +
Preference number: 3 (lower is better)
Translates to: KPHSFTGSGVQG*AGGLGSGPLRK
Trigger: TTTCCTGAGGGGCCCTGACCCTAACCCTCCAGCTCAGCCCTGTACACCTGACCCTGTAAATGAGTGGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 72 bp ATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGTaGGAAGAAGTCGTTGCCCTGCCAGTCCAGTGGTTT +
Preference number: 3 (lower is better)
Translates to: MPRQGGEDLILR*EEVVALPVQWF
Trigger: AAACCACTGGACTGGCAGGGCAACGACTTCTTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 72 bp AGAAGTGAGCTTGCACTGCATAGGGCAAGAAGAAGGTaGACCCCACTCCTCCAGGAGGCTGACAGTCTCAGC +
Preference number: 3 (lower is better)
Translates to: RSELALHRARRR*TPLLQEADSLS
Trigger: GCTGAGACTGTCAGCCTCCTGGAGGAGTGGGGTCCACCTTCTTCTTGCCCTATGCAGTGCAAGCTCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CAA 90 bp TCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGTGGACAGGGTGTCTTGTCCGGACCTaGCCATTGTGGAAAAGCGCT +
Preference number: 3 (lower is better)
Translates to: SLPCQSSGLNMNPAQWTGCLVRT*PLWKSA
Trigger: AGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACA...CCCTGTCCACTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325147.13
3UTR TCA 72 bp AGCCATGGAGATAAGAGAGGCGGGGAGGGAACACAGTaGCTGAGTCTGAGAGACAGCAAAGCACCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: SHGDKRGGEGTQ*LSLRDSKAPLQ
Trigger: CTGGAGAGGTGCTTTGCTGTCTCTCAGACTCAGTCACTGTGTTCCCTCCCCGCCTCTCTTATCTCCATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 72 bp AGGGTTGGCACCTGCAGTGACCAGATGGAGATACAATaGAGGCAGCTGCTACCATGCTTGGTGACCAGGGTA +
Preference number: 3 (lower is better)
Translates to: RVGTCSDQMEIQ*RQLLPCLVTRV
Trigger: TACCCTGGTCACCAAGCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGTGCCAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 72 bp TCTCACTTCATCGAAGGCGCAGATAACACAGTAGGGTaGCCTCCACTGGTCTGCCCATGCTCAGCAACCATG +
Preference number: 3 (lower is better)
Translates to: SHFIEGADNTVG*PPLVCPCSATM
Trigger: CATGGTTGCTGAGCATGGGCAGACCAGTGGAGGCCACCCTACTGTGTTATCTGCGCCTTCGATGAAGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 72 bp ACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTaGCCCTGCCTGCTTTGCCTGACTCTGAAATGCCAG +
Preference number: 3 (lower is better)
Translates to: TGTFLCRPTEAP*PCLLCLTLKCQ
Trigger: CTGGCATTTCAGAGTCAGGCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 72 bp ATGGGGGATGAAGGGTTGGCACCTGCAGTGACCAGATaGAGATACAATGCAGGCAGCTGCTACCATGCTTGG +
Preference number: 3 (lower is better)
Translates to: MGDEGLAPAVTR*RYNAGSCYHAW
Trigger: CCAAGCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGTGCCAACCCTTCATCCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CAA 90 bp GGGAAGAAGTCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGAAGCTTCCGGTTGTCTaGTCCGGACCTTGCCATTGT +
Preference number: 3 (lower is better)
Translates to: GKKSLPCQSSGLNMNPAQKLPVV*SGPCHC
Trigger: ACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTT...CTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325147.13
3UTR TCA 72 bp TTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTaGGGTGGGAAGAAGTCGTTGCCCTGCCAGTCCAGT +
Preference number: 3 (lower is better)
Translates to: FLCQDKGARTSS*GGKKSLPCQSS
Trigger: ACTGGACTGGCAGGGCAACGACTTCTTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR TCA 72 bp AGGAAAACATGGGGGATGAAGGGTTGGCACCTGCAGTaGCCAGATGGAGATACAATGCAGGCAGCTGCTACC +
Preference number: 3 (lower is better)
Translates to: RKTWGMKGWHLQ*PDGDTMQAAAT
Trigger: GGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGTGCCAACCCTTCATCCCCCATGTTTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 72 bp CATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTaGCACACAGGAAGAAGATTCCTGACCCACAATTAT +
Preference number: 3 (lower is better)
Translates to: HELIRSQAAAAS*HTGRRFLTHNY
Trigger: ATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
3UTR GCA 72 bp AAAGCCCCAGAGACATGGAGGCAGATGAGTCAACCTTaGTGGGTGAGAAGTGAGCTTGCACTGCATAGGGCA +
Preference number: 3 (lower is better)
Translates to: KAPETWRQMSQP*WVRSELALHRA
Trigger: TGCCCTATGCAGTGCAAGCTCACTTCTCACCCAGCAAGGTTGACTCATCTGCCTCCATGTCTCTGGGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 72 bp GACCAGATGGAGATACAATGCAGGCAGCTGCTACCATaGTTGGTGACCAGGGTACAAGCCCCTGATGAGCTT +
Preference number: 3 (lower is better)
Translates to: DQMEIQCRQLLP*LVTRVQAPDEL
Trigger: AAGCTCATCAGGGGCTTGTACCCTGGTCACCAAGCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CCA 72 bp TTGAGGTGGGAAGAAGTCGTTGCCCTGCCAGTCCAGTaGTTTGAACATGAATCCAGCCCAGTGGACAGGGAA +
Preference number: 3 (lower is better)
Translates to: LRWEEVVALPVQ*FEHESSPVDRE
Trigger: TTCCCTGTCCACTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTCTTCCCACCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CAA 90 bp CAGCAGCAGCAGGGATGCCACTCTCCCTTTGTGGAATCCTTCTTAATACAAGAGGGCGAGGACCTCATCTaGAGGTGGGAAGAAGTCGTT +
Preference number: 3 (lower is better)
Translates to: QQQQGCHSPFVESFLIQEGEDLI*RWEEVV
Trigger: AACGACTTCTTCCCACCTCAAGATGAGGTCCTCGCC...CTCTTGTATTAAGAAGGATTCCACAAAGGGAGAGTGGCATCCCTGCTGCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR-3UTR CAA 90 bp GCCTCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGACATAGAAGCTTCCGGTaGTCTTGTCCGGACCTTGCC +
Preference number: 3 (lower is better)
Translates to: ASCHTGRRFLTHNYHCKGHRSFR*SCPDLA
Trigger: GGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATG...TCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000332865.10
3UTR-3UTR CAA 90 bp GGCTCATGCTTTAAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTCAGTTCCAGGAACCTaGGATCACAGACATGGCCTC +
Preference number: 3 (lower is better)
Translates to: GSCFKGVFMPRQGGEDLISVPGT*DHRHGL
Trigger: GAGGCCATGTCTGTGATCCAAGGTTCCTGGAACTGA...GATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTTAAAGCATGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR GCA 72 bp GAAAGCCACTCCGAGATGCAGCCTAACTTCCTAGTTTaGATCAGCAAGATGAGCAGGCACCACCATGGAAAG +
Preference number: 3 (lower is better)
Translates to: ESHSEMQPNFLV*ISKMSRHHHGK
Trigger: CTTTCCATGGTGGTGCCTGCTCATCTTGCTGATGCAAACTAGGAAGTTAGGCTGCATCTCGGAGTGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR TCA 72 bp TCTCCTGAAAATACATCTTTGGTGCTGGGTAGATCCTaGATCCTGAGAATACAAGTTTCTGCTCCTGGATAC +
Preference number: 3 (lower is better)
Translates to: SPENTSLVLGRS*ILRIQVSAPGY
Trigger: GTATCCAGGAGCAGAAACTTGTATTCTCAGGATTCAGGATCTACCCAGCACCAAAGATGTATTTTCAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp CCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACAGACAGCGCCCGGGCTCTaGGCCCGAGCCCAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: PANMSSSGHRQPQPPATQTAPGL*ARAQSA
Trigger: GGCGGACTGGGCTCGGGCTCAGAGCCCGGGCGCTGT...CTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR TCA 90 bp TCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTACAGCGCCCGGGCTCTaGGCCCGAGCCCAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: SHMGPANMSSSGHRQPQPTAPGL*ARAQSA
Trigger: GGCGGACTGGGCTCGGGCTCAGAGCCCGGGCGCTGT...AGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR GCA 90 bp TTAAGATGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGGTGGCCCCCAGTCCGCCATCGTaGCCTGCCCCGGCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: LRCQSPKRGEKGCKPQVAPSPPS*PAPAPR
Trigger: TCGAGGAGCCGGGGCAGGGCACGATGGCGGACTGGG...GGCCACCTGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACATCTTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp TTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGACAGCGCCCGGGCTCTaGGCCCGAGCCCAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: FPERVPFTHGTSQHELIRTAPGL*ARAQSA
Trigger: GGCGGACTGGGCTCGGGCTCAGAGCCCGGGCGCTGT...CCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
CDS-3UTR TCA 90 bp CTGAGTCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCAACAGCGCCCGGGCTCTaGGCCCGAGCCCAGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LSLRDSKAPLQRKPLRDATAPGL*ARAQSA
Trigger: GGCGGACTGGGCTCGGGCTCAGAGCCCGGGCGCTGT...TGCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGACTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp TGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGGTGGCCACGTCTCTGCCATCTCCAGGGTaGGAAGCCTCGGTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: CQSPKRGEKGCKPQVATSLPSPG*EASVGG
Trigger: TCCTCCGACCGAGGCTTCTCACCCTGGAGATGGCAG...AGACGTGGCCACCTGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGTCCGCCATCGTGCCCTaGCCCGGCTCCTCGACGCGG +
Preference number: 4 (lower is better)
Translates to: LSHMGPANMSSSGHRQPQSAIVP*PGSSTR
Trigger: CCGCGTCGAGGAGCCGGGGCAGGGCACGATGGCGGA...CTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CCA 90 bp CATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCGGAGGGGCTGGGCCTTaGTTTCCCCGAGAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: HGTSQHELIRSQAAAASCGGAGP*FPRESP
Trigger: GGGACTCTCTCGGGGAAACCAAGGCCCAGCCCCTCC...GCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp AAGCCCCTGATGAGCTTGCCATGGCAGCCAAGGACACTGGTGCCGGAGGAACGAACAGCCAGGGGAGTCTaGCAGGGCTTGGCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: KPLMSLPWQPRTLVPEERTARGV*QGLAEA
Trigger: CGCCTCCGCCAAGCCCTGCCAGACTCCCCTGGCTGT...TCGTTCCTCCGGCACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAGGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp GGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACGCATCAGGCTGTGGCTaGTCTGTGGTCAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GTSQHELIRSQAAAASCHASGCG*SVVSLE
Trigger: CTCCAGGCTGACCACAGATCAGCCACAGCCTGATGC...GTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CTGAGTCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCATCCGCCATCGTGCCCTaGCCCGGCTCCTCGACGCGG +
Preference number: 4 (lower is better)
Translates to: LSLRDSKAPLQRKPLRDASAIVP*PGSSTR
Trigger: CCGCGTCGAGGAGCCGGGGCAGGGCACGATGGCGGA...TGCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGACTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCAGGCAGGGAAGACCCTaGCTGCCCTTGGCACCCACA +
Preference number: 4 (lower is better)
Translates to: HGTSQHELIRSQAAAASCRQGRP*LPLAPT
Trigger: TGTGGGTGCCAAGGGCAGCCAGGGTCTTCCCTGCCT...GCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CCA 90 bp CATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCCCACAGAAGCTCCCTaGCCCTGCCTGCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: HGTSQHELIRSQAAAASCPTEAP*PCLLCL
Trigger: CAGGCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGG...GCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGGTGGCCACGTCTGCATCCTGCAGAGGCTaGGGACAAGGAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: CQSPKRGEKGCKPQVATSASCRG*GQGGWH
Trigger: GTGCCATCCTCCTTGTCCCCAGCCTCTGCAGGATGC...AGACGTGGCCACCTGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp GGGGAGAAGGGCTGCAAGCCACAGGTGGCCACGTCTGGGATTCACCAGCTGCTCTCAGGTGTACAGGGCTaGGCTGGAGGGTTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GEKGCKPQVATSGIHQLLSGVQG*AGGLGS
Trigger: TGACCCTAACCCTCCAGCTCAGCCCTGTACACCTGA...GAGCAGCTGGTGAATCCCAGACGTGGCCACCTGTGGCTTGCAGCCCTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp GGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACCCCTGGCTCTCACACTaGGCCCCCAAGAGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: GTSQHELIRSQAAAASCHPWLSH*APKSPF
Trigger: AAAAGGACTCTTGGGGGCTCAGTGTGAGAGCCAGGG...GTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp AGGCCACAATTAGACCCACGGCCATGCCACATAGAAGCTTCCGGTTGTCTTGTCTCCGCCATCGTGCCCTaGCCCGGCTCCTCGACGCGG +
Preference number: 4 (lower is better)
Translates to: RPQLDPRPCHIEASGCLVSAIVP*PGSSTR
Trigger: CCGCGTCGAGGAGCCGGGGCAGGGCACGATGGCGGA...GACAAGACAACCGGAAGCTTCTATGTGGCATGGCCGTGGGTCTAATTGTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000332865.10
CDS-3UTR GCA 90 bp GGGGAGAAGGGCTGCAAGCCACAGGTGGCCACGTCTGGGATTCACCAGCTGCTCTGGCCTCCACTGGTCTaGCCATGCTCAGCAACCATG +
Preference number: 4 (lower is better)
Translates to: GEKGCKPQVATSGIHQLLWPPLV*PCSATM
Trigger: CATGGTTGCTGAGCATGGGCAGACCAGTGGAGGCCA...GAGCAGCTGGTGAATCCCAGACGTGGCCACCTGTGGCTTGCAGCCCTTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CAGGGGAGTCTGGCAGGGCTTGGCGGAGGCGCCAAAGTTACCAGCAAGCTAGAAAGCCAAGGACACTGGTaGCGGAGGAACGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: QGSLAGLGGGAKVTSKLESQGHW*RRNDRG
Trigger: GCCCCTGTCGTTCCTCCGGCACCAGTGTCCTTGGCT...TTCTAGCTTGCTGGTAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGGTGGCCACGTCTATGAATCCAGCCCAGTaGACAGGGAAGGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: CQSPKRGEKGCKPQVATSMNPAQ*TGKAQG
Trigger: TCCCTGGGCCTTCCCTGTCCACTGGGCTGGATTCAT...AGACGTGGCCACCTGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp GGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACATGGGACCAGCCAACATaGGCTCATCAGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: GPANMSSSGHRQPQPPATWDQPT*AHQVTG
Trigger: GCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCA...TGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CCA 90 bp GGGCTGCAAGCCACAGGTGGCCACGTCTGGGATTCACCAGCTGCTCTGCTCAGAGATACACGCACACCGTaGGCCCTTACCATGCCATCC +
Preference number: 4 (lower is better)
Translates to: GLQATGGHVWDSPAALLRDTRTP*ALTMPS
Trigger: GGATGGCATGGTAAGGGCCCACGGTGTGCGTGTATC...TCTGAGCAGAGCAGCTGGTGAATCCCAGACGTGGCCACCTGTGGCTTGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR CCA 90 bp CTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGGGAGGGGCTGGGCCTTaGTTTCCCCGAGAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: LSHMGPANMSSSGHRQPQGGAGP*FPRESP
Trigger: GGGACTCTCTCGGGGAAACCAAGGCCCAGCCCCTCC...CTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TTAAGATGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGGTGGCCGAGTCTGGCAGGGCTTaGCGGAGGCGCCAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: LRCQSPKRGEKGCKPQVAESGRA*RRRQSY
Trigger: GTAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTC...GGCCACCTGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACATCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GTTGGCACCTGCAGTGACCAGATGGAGATACAATGCAGGCAGCTGCTACCATGCACAGCCAGGGGAGTCTaGCAGGGCTTGGCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: VGTCSDQMEIQCRQLLPCTARGV*QGLAEA
Trigger: CGCCTCCGCCAAGCCCTGCCAGACTCCCCTGGCTGT...GCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGTGCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACACCTGGGGTGTAGCTaGTTACCACAGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GPANMSSSGHRQPQPPATHLGCS*LPQLSH
Trigger: GTGGCTGAGCTGTGGTAACCAGCTACACCCCAGGTG...TGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CAGGGGAGTCTGGCAGGGCTTGGCGGAGGCGCCAAAGTTACCAGCAAGCTAGAATGTACAGGGCTGAGCTaGAGGGTTAGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QGSLAGLGGGAKVTSKLECTGLS*RVRVRA
Trigger: GGCCCTGACCCTAACCCTCCAGCTCAGCCCTGTACA...TTCTAGCTTGCTGGTAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp TCTCCCCAAGGGTCTCACTTCATCGAAGGCGCAGATAACACAGTAGGGTGGCCTGCTAGGGCAGGGCACTaGTACACGCACACCGTGGGC +
Preference number: 4 (lower is better)
Translates to: SPQGSHFIEGADNTVGWPARAGH*YTHTVG
Trigger: GCCCACGGTGTGCGTGTATCAGTGCCCTGCCCTAGC...AGGCCACCCTACTGTGTTATCTGCGCCTTCGATGAAGTGAGACCCTTGGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR TCA 90 bp ACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACACTCGGTCGGAGGAGATaGCACCCACTTAGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: TSQHELIRSQAAAASCHTLGRRR*HPLRVH
Trigger: GTGAACCCTAAGTGGGTGTCATCTCCTCCGACCGAG...TGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp GGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACCCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: GTSQHELIRSQAAAASCHPVLIL*IPIDVQ
Trigger: CTGGACATCGATAGGGATGCAGAGGATCAGAACCGG...GTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
CDS-3UTR GCA 90 bp ACCAGGGTACAAGCCCCTGATGAGCTTGCCATGGCAGCCAAGGACACTGGTGCCGCAGCCGCAGCCTCCTaGCACACAGGAAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: TRVQAPDELAMAAKDTGAAAAAS*HTGRRF
Trigger: GAATCTTCTTCCTGTGTGGCAGGAGGCTGCGGCTGC...GGCACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAGGGGCTTGTACCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TGCAGCCTTAAGATGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGGAACGACAGGGGCCTaGAAAGGGACATCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: CSLKMSESQARGEGLQATGTTGA*KGTSEE
Trigger: CTCCTCGGATGTCCCTTTGCAGGCCCCTGTCGTTCC...TGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACATCTTAAGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CAGGGGAGTCTGGCAGGGCTTGGCGGAGGCGCCAAAGTTACCAGCAAGCTAGAAACAGGTGGCCACGTCTaGGATTCACCAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: QGSLAGLGGGAKVTSKLETGGHV*DSPAAL
Trigger: CAGAGCAGCTGGTGAATCCCAGACGTGGCCACCTGT...TTCTAGCTTGCTGGTAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GGGCTGCAAGCCACAGGTGGCCACGTCTGGGATTCACCAGCTGCTCTGCTCAGAGATAACACAGTAGGGTaGCCTCCACTGGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GLQATGGHVWDSPAALLRDNTVG*PPLVCP
Trigger: TGGGCAGACCAGTGGAGGCCACCCTACTGTGTTATC...TCTGAGCAGAGCAGCTGGTGAATCCCAGACGTGGCCACCTGTGGCTTGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACTGGGGACAAGGAGGATaGCACAGAATGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: GTSQHELIRSQAAAASCHWGQGG*HRMPSQ
Trigger: CTGTGATGGCATTCTGTGCCATCCTCCTTGTCCCCA...GTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp AAGCCCCTGATGAGCTTGCCATGGCAGCCAAGGACACTGGTGCCGGAGGAACGAGGTAGGCTTGCTGTGTaGAAGGAAGGAGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: KPLMSLPWQPRTLVPEERGRLAV*KEGGGE
Trigger: CTCCCCTCCTCCTTCCTTCCACACAGCAAGCCTACC...TCGTTCCTCCGGCACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TCCGGTTGTCTTGTCCGGACCTTGCCATTGTGGAAAAGCGCTTCACGCTCCCTGGAGGGGGAAGCAAGCTaGGAGCAAGACCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SGCLVRTLPLWKSASRSLEGEAS*EQDQPS
Trigger: GCTGGGCTGGTCTTGCTCCCAGCTTGCTTCCCCCTC...CAGGGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACAACCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR CCA 90 bp ACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACACACCTGGGGTGTAGCTaGTTACCACAGCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TSQHELIRSQAAAASCHTHLGCS*LPQLSH
Trigger: GTGGCTGAGCTGTGGTAACCAGCTACACCCCAGGTG...TGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp ACTGAGTCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCCACCCGCACCAGTGCTaGAGGAGACACTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TESERQQSTSPAKATPRCHPHQC*RRHCRL
Trigger: GAGCCTGCAGTGTCTCCTTCAGCACTGGTGCGGGTG...GCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGACTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR TCA 90 bp CAAAGTGGGGCTGCAGGCATCAGGCTGTGGCTGATCTGTGGTCAGCCTGGAGCTACAGAAGTGGTGATTTaGCCACCCACCCGCACCAGT +
Preference number: 4 (lower is better)
Translates to: QSGAAGIRLWLICGQPGATEVVI*PPTRTS
Trigger: ACTGGTGCGGGTGGGTGGTCAAATCACCACTTCTGT...AGCTCCAGGCTGACCACAGATCAGCCACAGCCTGATGCCTGCAGCCCCACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR TCA 90 bp AGGCTGCAGTCCACTCCTTCATCCACAGCCCGTTCTCCCCAAGGGTCTCACTTCACTCCTCCAGGAGGCTaGCAGTCTCAGCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: RLQSTPSSTARSPQGSHFTPPGG*QSQPGT
Trigger: TGTACCTGGCTGAGACTGTCAGCCTCCTGGAGGAGT...GAAGTGAGACCCTTGGGGAGAACGGGCTGTGGATGAAGGAGTGGACTGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp ACCAGGGTACAAGCCCCTGATGAGCTTGCCATGGCAGCCAAGGACACTGGTGCCGTCAACCTTGCTGGGTaGGAAGTGAGCTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: TRVQAPDELAMAAKDTGAVNLAG*EVSLHC
Trigger: GCAGTGCAAGCTCACTTCTCACCCAGCAAGGTTGAC...GGCACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAGGGGCTTGTACCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACAGTTAGACCCACGGCCATaGCACATAGAAGCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: PANMSSSGHRQPQPPATQLDPRP*HIEASG
Trigger: ACCGGAAGCTTCTATGTGGCATGGCCGTGGGTCTAA...CTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR GCA 90 bp GGGCTGCAAGCCACAGGTGGCCACGTCTGGGATTCACCAGCTGCTCTGCTCAGAATTCACCAGCTGCTCTaGTCAGACCTGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GLQATGGHVWDSPAALLRIHQLL*SDLASP
Trigger: TGGAGAAGCCAGGTCTGAGCAGAGCAGCTGGTGAAT...TCTGAGCAGAGCAGCTGGTGAATCCCAGACGTGGCCACCTGTGGCTTGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCTCACGTCCTTGCCCTaGACAAGAAGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: HGTSQHELIRSQAAAASCLTSLP*TRSRRG
Trigger: TCCTCTCCTACTTCTTGTCCAGGGCAAGGACGTGAG...GCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CCA 90 bp ACTGAGTCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCAGGCAGGGAAGACCCTaGCTGCCCTTGGCACCCACA +
Preference number: 4 (lower is better)
Translates to: TESERQQSTSPAKATPRCRQGRP*LPLAPT
Trigger: TGTGGGTGCCAAGGGCAGCCAGGGTCTTCCCTGCCT...GCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGACTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCAGCCTAAGGCAGGGAAGACCCTaGCTGCCCTTGGCACCCACA +
Preference number: 4 (lower is better)
Translates to: SERQQSTSPAKATPRCSLRQGRP*LPLAPT
Trigger: TGTGGGTGCCAAGGGCAGCCAGGGTCTTCCCTGCCT...TAGGCTGCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp AGGCCAAGGCTGCAGTCCACTCCTTCATCCACAGCCCGTTCTCCCCAAGGGTCTTGCTCTGCTCAGACCTaGCTTCTCCAGACACGCTGT +
Preference number: 4 (lower is better)
Translates to: RPRLQSTPSSTARSPQGSCSAQT*LLQTRC
Trigger: ACAGCGTGTCTGGAGAAGCCAGGTCTGAGCAGAGCA...AGACCCTTGGGGAGAACGGGCTGTGGATGAAGGAGTGGACTGCAGCCTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GAAGTCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGTGGACCCCACAGAAGCTCCCTaGCCCTGCCTGCTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: EVVALPVQWFEHESSPVDPTEAP*PCLLCL
Trigger: CAGGCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGG...GTCCACTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TCCGGACCTTGCCATTGTGGAAAAGCGCTTCACGCTCCCTGTAAGCAGGCTGGTGAGTCTGGCAGGGCTTaGCGGAGGCGCCAAAGTTAC +
Preference number: 4 (lower is better)
Translates to: SGPCHCGKALHAPCKQAGESGRA*RRRQSY
Trigger: GTAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTC...ACCAGCCTGCTTACAGGGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR CCA 90 bp GGGCTGCAAGCCACAGGTGGCCACGTCTGGGATTCACCAGCTGCTCTGCTCAGATGGGGACAAGGAGGATaGCACAGAATGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: GLQATGGHVWDSPAALLRWGQGG*HRMPSQ
Trigger: CTGTGATGGCATTCTGTGCCATCCTCCTTGTCCCCA...TCTGAGCAGAGCAGCTGGTGAATCCCAGACGTGGCCACCTGTGGCTTGCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACAGCCCTGCCAGTCCAGTaGTTTGAACATGAATCCAGC +
Preference number: 4 (lower is better)
Translates to: GPANMSSSGHRQPQPPATALPVQ*FEHESS
Trigger: GCTGGATTCATGTTCAAACCACTGGACTGGCAGGGC...TGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TGCAGCCTTAAGATGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGTGTGGCCACACAGGTaGGGGGACAGTGATCCCATA +
Preference number: 4 (lower is better)
Translates to: CSLKMSESQARGEGLQATVWPHR*GDSDPI
Trigger: TATGGGATCACTGTCCCCCCACCTGTGTGGCCACAC...TGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACATCTTAAGGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CTCATTTACAGGGTCAGGTGTACAGGGCTGAGCTGGAGGGTTAGGGTCAGGGCCGCTGTGGCTGATCTGTaGTCAGCCTGGAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LIYRVRCTGLSWRVRVRAAVADL*SAWSSE
Trigger: CTCTGAGCTCCAGGCTGACCACAGATCAGCCACAGC...GGCCCTGACCCTAACCCTCCAGCTCAGCCCTGTACACCTGACCCTGTAAATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TTAAGATGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGGTGGCCCTGATGAGCTTGCCATaGCAGCCAAGGACACTGGTG +
Preference number: 4 (lower is better)
Translates to: LRCQSPKRGEKGCKPQVALMSLP*QPRTLV
Trigger: CACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAG...GGCCACCTGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACATCTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACAGCCTGCAGTGACCAGATaGAGATACAATGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PANMSSSGHRQPQPPATQPAVTR*RYNAGS
Trigger: GCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGG...CTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp GTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCTGGGACCAGCCAACATaGGCTCATCAGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: VPFTHGTSQHELIRSQAAWDQPT*AHQVTG
Trigger: GCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCA...GGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
CDS-3UTR TCA 90 bp CTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGACTCCTCCAGGAGGCTaGCAGTCTCAGCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: LSHMGPANMSSSGHRQPQTPPGG*QSQPGT
Trigger: TGTACCTGGCTGAGACTGTCAGCCTCCTGGAGGAGT...CTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp TCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTGTCAACCTTGCTGGGTaGGAAGTGAGCTTGCACTGC +
Preference number: 4 (lower is better)
Translates to: SHMGPANMSSSGHRQPQPVNLAG*EVSLHC
Trigger: GCAGTGCAAGCTCACTTCTCACCCAGCAAGGTTGAC...AGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp ACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTTGCTCAGGTGTACAGGGCTaGGCTGGAGGGTTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TGTFLCRPTEAPWPCLLCSGVQG*AGGLGS
Trigger: TGACCCTAACCCTCCAGCTCAGCCCTGTACACCTGA...GCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TCCGGTTGTCTTGTCCGGACCTTGCCATTGTGGAAAAGCGCTTCACGCTCCCTGCGTGGGCCCTTACCATaGCATCCAGGTACCGGTTCT +
Preference number: 4 (lower is better)
Translates to: SGCLVRTLPLWKSASRSLRGPLP*HPGTGS
Trigger: AGAACCGGTACCTGGATGGCATGGTAAGGGCCCACG...CAGGGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACAACCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR GCA 90 bp CTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGGCAGCCGCAGCCTCCTaGCACACAGGAAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: LSHMGPANMSSSGHRQPQAAAAS*HTGRRF
Trigger: GAATCTTCTTCCTGTGTGGCAGGAGGCTGCGGCTGC...CTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR GCA 90 bp TTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGCCACTGGTCTGCCCATaGTCAGCAACCATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FPERVPFTHGTSQHELIRPLVCP*SATMAR
Trigger: CCTGGCCATGGTTGCTGAGCATGGGCAGACCAGTGG...CCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp ACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTTGCTGGCCTCCACTGGTCTaGCCATGCTCAGCAACCATG +
Preference number: 4 (lower is better)
Translates to: TGTFLCRPTEAPWPCLLCWPPLV*PCSATM
Trigger: CATGGTTGCTGAGCATGGGCAGACCAGTGGAGGCCA...GCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGGGGAGACCCCGCTGCTaGGCGACCCCTCGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQGRPRC*ATPRWS
Trigger: GCTCCAGCGAGGGGTCGCGCAGCAGCGGGGTCTCCC...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000486280.1
CDS-3UTR CCA 90 bp TCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCGGACCTTGCCATTGTaGAAAAGCGCTTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: SHMGPANMSSSGHRQPQPRTLPL*KSASRS
Trigger: GGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCG...AGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CCA 90 bp CAGGGGAGTCTGGCAGGGCTTGGCGGAGGCGCCAAAGTTACCAGCAAGCTAGAACTCACGTCCTTGCCCTaGACAAGAAGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: QGSLAGLGGGAKVTSKLELTSLP*TRSRRG
Trigger: TCCTCTCCTACTTCTTGTCCAGGGCAAGGACGTGAG...TTCTAGCTTGCTGGTAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CAAAGTGGGGCTGCAGGCATCAGGCTGTGGCTGATCTGTGGTCAGCCTGGAGCTCATGCTCAGCAACCATaGCCAGGAGTAACTGCCATC +
Preference number: 4 (lower is better)
Translates to: QSGAAGIRLWLICGQPGAHAQQP*PGVTAI
Trigger: GATGGCAGTTACTCCTGGCCATGGTTGCTGAGCATG...AGCTCCAGGCTGACCACAGATCAGCCACAGCCTGATGCCTGCAGCCCCACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGGTGTGGCCACACAGGTaGGGGGACAGTGATCCCATA +
Preference number: 4 (lower is better)
Translates to: LSHMGPANMSSSGHRQPQVWPHR*GDSDPI
Trigger: TATGGGATCACTGTCCCCCCACCTGTGTGGCCACAC...CTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GCCAGGAGTAACTGCCATCTCCAGGGTGAGAAGCCTCGGTCGGAGGAGATGACACTGATGAGCTTGCCATaGCAGCCAAGGACACTGGTG +
Preference number: 4 (lower is better)
Translates to: ARSNCHLQGEKPRSEEMTLMSLP*QPRTLV
Trigger: CACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAG...TGTCATCTCCTCCGACCGAGGCTTCTCACCCTGGAGATGGCAGTTACTCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GTGGCTAGGCCAAGGCTGCAGTCCACTCCTTCATCCACAGCCCGTTCTCCCCAACATGGAAAGAGCACCTaGGGTGTAGCTGGTTACCAC +
Preference number: 4 (lower is better)
Translates to: VARPRLQSTPSSTARSPQHGKST*GVAGYH
Trigger: GTGGTAACCAGCTACACCCCAGGTGCTCTTTCCATG...TTGGGGAGAACGGGCTGTGGATGAAGGAGTGGACTGCAGCCTTGGCCTAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp ACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTTGCGAGCAGGCACCACCATaGAAAGAGCACCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TGTFLCRPTEAPWPCLLCEQAPP*KEHLGC
Trigger: ACACCCCAGGTGCTCTTTCCATGGTGGTGCCTGCTC...GCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp ACCAGGGTACAAGCCCCTGATGAGCTTGCCATGGCAGCCAAGGACACTGGTGCCAGACCCCAAAGTACCTaGGAGAGCTGCAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: TRVQAPDELAMAAKDTGARPQST*ESCKQP
Trigger: TGGCTGTTTGCAGCTCTCCCAGGTACTTTGGGGTCT...GGCACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAGGGGCTTGTACCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGCCTCGCTGGAGCTGCTaGGCCGCCACGCGCGCCTTC +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQPRWSC*AATRAF
Trigger: GAAGGCGCGCGTGGCGGCCCAGCAGCTCCAGCGAGG...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486280.1
CDS-3UTR CCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGTGCGCGACCCCTCGCTaGAGCTGCTGGGCCGCCACG +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQCATPR*SCWAAT
Trigger: CGTGGCGGCCCAGCAGCTCCAGCGAGGGGTCGCGCA...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000486280.1
3UTR CAA 72 bp GGTGGGAAGAAGTCGTTGCCCTGCCAGTCCAGTGGTTaGAACATGAATCCAGCCCAGTGGACAGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GGKKSLPCQSSG*NMNPAQWTGKA
Trigger: GGCCTTCCCTGTCCACTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTCTTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp TGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGGTGGCCACGTCTGTGCTGGGTAGATCCTaGATCCTGAGAATACAAGTT +
Preference number: 4 (lower is better)
Translates to: CQSPKRGEKGCKPQVATSVLGRS*ILRIQV
Trigger: AACTTGTATTCTCAGGATTCAGGATCTACCCAGCAC...AGACGTGGCCACCTGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp CTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGGCGAGGACCTCATCTTaGGGTGGGAAGAAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: LSHMGPANMSSSGHRQPQARTSS*GGKKSL
Trigger: CAACGACTTCTTCCCACCTCAAGATGAGGTCCTCGC...CTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTATCCGCCATCGTGCCCTaGCCCGGCTCCTCGACGCGG +
Preference number: 4 (lower is better)
Translates to: SCHTGRRFLTHNYHCKGVSAIVP*PGSSTR
Trigger: CCGCGTCGAGGAGCCGGGGCAGGGCACGATGGCGGA...TACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR GCA 90 bp TCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: SHMGPANMSSSGHRQPQPPVLIL*IPIDVQ
Trigger: CTGGACATCGATAGGGATGCAGAGGATCAGAACCGG...AGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
CDS-3UTR GCA 90 bp ACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACAGTCTTGTCCGGACCTTaGCATTGTGGAAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: TSQHELIRSQAAAASCHTVLSGP*HCGKAL
Trigger: AAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGAC...TGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR GCA 90 bp GCCAGGAGTAACTGCCATCTCCAGGGTGAGAAGCCTCGGTCGGAGGAGATGACATTAGACCCACGGCCATaGCACATAGAAGCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: ARSNCHLQGEKPRSEEMTLDPRP*HIEASG
Trigger: ACCGGAAGCTTCTATGTGGCATGGCCGTGGGTCTAA...TGTCATCTCCTCCGACCGAGGCTTCTCACCCTGGAGATGGCAGTTACTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGTGGACAGGGCTGGGATTCACCAGCTaGTCTGCTCAGACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SLPCQSSGLNMNPAQWTGLGFTS*SAQTWL
Trigger: AAGCCAGGTCTGAGCAGAGCAGCTGGTGAATCCCAG...CCCTGTCCACTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGTGGACAGGGTGGCTAGGCCAAGGCTaGAGTCCACTCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: SLPCQSSGLNMNPAQWTGWLGQG*SPLLHP
Trigger: TGGATGAAGGAGTGGACTGCAGCCTTGGCCTAGCCA...CCCTGTCCACTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CTGCCTGCTTTGCCTGACTCTGAAATGCCAGACAGGCCCATTTCTAGGTCTGTTAGCCAAGGACACTGGTaGCGGAGGAACGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: LPALPDSEMPDRPISRSVSQGHW*RRNDRG
Trigger: GCCCCTGTCGTTCCTCCGGCACCAGTGTCCTTGGCT...AACAGACCTAGAAATGGGCCTGTCTGGCATTTCAGAGTCAGGCAAAGCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CTCATTTACAGGGTCAGGTGTACAGGGCTGAGCTGGAGGGTTAGGGTCAGGGCCCTCACGTCCTTGCCCTaGACAAGAAGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LIYRVRCTGLSWRVRVRALTSLP*TRSRRG
Trigger: TCCTCTCCTACTTCTTGTCCAGGGCAAGGACGTGAG...GGCCCTGACCCTAACCCTCCAGCTCAGCCCTGTACACCTGACCCTGTAAATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCTCACGTCCTTGCCCTaGACAAGAAGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SHMGPANMSSSGHRQPQPLTSLP*TRSRRG
Trigger: TCCTCTCCTACTTCTTGTCCAGGGCAAGGACGTGAG...AGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CCA 90 bp TGCAGCCTTAAGATGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGACCTCATCTTGAGGTaGGAAGAAGTCGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CSLKMSESQARGEGLQATDLILR*EEVVAL
Trigger: CAGGGCAACGACTTCTTCCCACCTCAAGATGAGGTC...TGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACATCTTAAGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp ACTGAGTCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCGGTAGGCTTGCTGTGTaGAAGGAAGGAGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TESERQQSTSPAKATPRCGRLAV*KEGGGE
Trigger: CTCCCCTCCTCCTTCCTTCCACACAGCAAGCCTACC...GCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGACTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TGCAGCCTTAAGATGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACACCTGCAGTGACCAGATaGAGATACAATGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: CSLKMSESQARGEGLQATPAVTR*RYNAGS
Trigger: GCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGG...TGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACATCTTAAGGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CTCACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTTGGCCCAGGAAAACATaGGGGATGAAGGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LTGTFLCRPTEAPWPCLLWPRKT*GMKGWH
Trigger: GTGCCAACCCTTCATCCCCCATGTTTTCCTGGGCCA...AAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CTCATTTACAGGGTCAGGTGTACAGGGCTGAGCTGGAGGGTTAGGGTCAGGGCCAGACCCCAAAGTACCTaGGAGAGCTGCAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: LIYRVRCTGLSWRVRVRARPQST*ESCKQP
Trigger: TGGCTGTTTGCAGCTCTCCCAGGTACTTTGGGGTCT...GGCCCTGACCCTAACCCTCCAGCTCAGCCCTGTACACCTGACCCTGTAAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp GAAGTCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGTGGACTCCAGGTACCGGTTCTaGTCCTCTGCATCCCTATCG +
Preference number: 4 (lower is better)
Translates to: EVVALPVQWFEHESSPVDSRYRF*SSASLS
Trigger: CGATAGGGATGCAGAGGATCAGAACCGGTACCTGGA...GTCCACTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp GGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACCAGGAAGAAGATTCCTaGCCCACAATTATCATTGCA +
Preference number: 4 (lower is better)
Translates to: GTSQHELIRSQAAAASCHQEEDS*PTIIIA
Trigger: TGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTG...GTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR TCA 90 bp GGGGAGAAGGGCTGCAAGCCACAGGTGGCCACGTCTGGGATTCACCAGCTGCTCCTAGGTCTGTTCTCCTaGAAATACATCTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GEKGCKPQVATSGIHQLLLGLFS*KYIFGA
Trigger: AGCACCAAAGATGTATTTTCAGGAGAACAGACCTAG...GAGCAGCTGGTGAATCCCAGACGTGGCCACCTGTGGCTTGCAGCCCTTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp CTGCCTGCTTTGCCTGACTCTGAAATGCCAGACAGGCCCATTTCTAGGTCTGTTGCATCAGGCTGTGGCTaGTCTGTGGTCAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LPALPDSEMPDRPISRSVASGCG*SVVSLE
Trigger: CTCCAGGCTGACCACAGATCAGCCACAGCCTGATGC...AACAGACCTAGAAATGGGCCTGTCTGGCATTTCAGAGTCAGGCAAAGCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp GCTGGGCCTTGGTTTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACAGTCTTGTCCGGACCTTaGCATTGTGGAAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: AGPWFPRESPFHTWDQPTVLSGP*HCGKAL
Trigger: AAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGAC...TGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAAACCAAGGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
CDS-3UTR GCA 90 bp ATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACAGGAAGAAGATTTAGACCCACGGCCATaGCACATAGAAGCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: MSSSGHRQPQPPATQEEDLDPRP*HIEASG
Trigger: ACCGGAAGCTTCTATGTGGCATGGCCGTGGGTCTAA...ATCTTCTTCCTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR GCA 90 bp GTTTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGCAGCCGCAGCCTCCTaGCACACAGGAAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: VSPRESLSHMGPANMSSSAAAAS*HTGRRF
Trigger: GAATCTTCTTCCTGTGTGGCAGGAGGCTGCGGCTGC...TGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
CDS-3UTR GCA 90 bp GTTCCAGGAACCTTGGATCACAGACATGGCCTCACCCAGACAAGGACACGACCGATGGCCAGGAGTAACTaGCATCTCCAGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: VPGTLDHRHGLTQTRTRPMARSN*HLQGEK
Trigger: CTTCTCACCCTGGAGATGGCAGTTACTCCTGGCCAT...CGGTCGTGTCCTTGTCTGGGTGAGGCCATGTCTGTGATCCAAGGTTCCTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp GTTGGCACCTGCAGTGACCAGATGGAGATACAATGCAGGCAGCTGCTACCATGCTGGCCCTGCCTGCTTTaGCTGACTCTGAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: VGTCSDQMEIQCRQLLPCWPCLL*LTLKCQ
Trigger: CTGGCATTTCAGAGTCAGGCAAAGCAGGCAGGGCCA...GCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGTGCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TCTCCCCAAGGGTCTCACTTCATCGAAGGCGCAGATAACACAGTAGGGTGGCCTTGGCCCTGCCTGCTTTaGCTGACTCTGAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: SPQGSHFIEGADNTVGWPWPCLL*LTLKCQ
Trigger: CTGGCATTTCAGAGTCAGGCAAAGCAGGCAGGGCCA...AGGCCACCCTACTGTGTTATCTGCGCCTTCGATGAAGTGAGACCCTTGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CTGGCACAGCAGCAGCAGGGATGCCACTCTCCCTTTGTGGAATCCTTCTTAATAGTAGGGAGGGCATCCTaGAGAGGCTGGGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: LAQQQQGCHSPFVESFLIVGRAS*RGWGQG
Trigger: TCCTTGTCCCCAGCCTCTGCAGGATGCCCTCCCTAC...TATTAAGAAGGATTCCACAAAGGGAGAGTGGCATCCCTGCTGCTGCTGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCAGCCTAGTGGGAAGAAGTCGTTaGCCTGCCAGTCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: SERQQSTSPAKATPRCSLVGRSR*PASPVV
Trigger: AACCACTGGACTGGCAGGGCAACGACTTCTTCCCAC...TAGGCTGCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CTGGCACAGCAGCAGCAGGGATGCCACTCTCCCTTTGTGGAATCCTTCTTAATAGGAACGACAGGGGCCTaGAAAGGGACATCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: LAQQQQGCHSPFVESFLIGTTGA*KGTSEE
Trigger: CTCCTCGGATGTCCCTTTGCAGGCCCCTGTCGTTCC...TATTAAGAAGGATTCCACAAAGGGAGAGTGGCATCCCTGCTGCTGCTGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp ACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTTGCAGGCAGCTGCTACCATaGTTGGTGACCAGGGTACAA +
Preference number: 4 (lower is better)
Translates to: TGTFLCRPTEAPWPCLLCRQLLP*LVTRVQ
Trigger: TTGTACCCTGGTCACCAAGCATGGTAGCAGCTGCCT...GCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGGCCGAAACCCGGCCCTaGTCGGACCCGGAAGGATCC +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQAETRP*SDPEGS
Trigger: GGATCCTTCCGGGTCCGAGCAGGGCCGGGTTTCGGC...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486280.1
CDS-3UTR CCA 90 bp CTTCATCCACAGCCCGTTCTCCCCAAGGGTCTCACTTCATCGAAGGCGCAGATACGGACCTTGCCATTGTaGAAAAGCGCTTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: LHPQPVLPKGLTSSKAQIRTLPL*KSASRS
Trigger: GGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCG...TATCTGCGCCTTCGATGAAGTGAGACCCTTGGGGAGAACGGGCTGTGGATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGTGCTCTGCTCAGACCTaGCTTCTCCAGACACGCTGT +
Preference number: 4 (lower is better)
Translates to: ESLSHMGPANMSSSGHRQCSAQT*LLQTRC
Trigger: ACAGCGTGTCTGGAGAAGCCAGGTCTGAGCAGAGCA...CTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GTTTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAACAGGTGGCCACGTCTaGGATTCACCAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VSPRESLSHMGPANMSSSTGGHV*DSPAAL
Trigger: CAGAGCAGCTGGTGAATCCCAGACGTGGCCACCTGT...TGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCATGCTCAGCAACCATaGCCAGGAGTAACTGCCATC +
Preference number: 4 (lower is better)
Translates to: LSHMGPANMSSSGHRQPQHAQQP*PGVTAI
Trigger: GATGGCAGTTACTCCTGGCCATGGTTGCTGAGCATG...CTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TTGGTTTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCAGCAGGCATCAGGCTGTaGCTGATCTGTGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LVSPRESLSHMGPANMSSAGIRL*LICGQP
Trigger: AGGCTGACCACAGATCAGCCACAGCCTGATGCCTGC...TGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp AAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGTGGGAAGAGGGGGAAGCAAGCTaGGAGCAAGACCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KGVFMPRQGGEDLILRWEEGEAS*EQDQPS
Trigger: GCTGGGCTGGTCTTGCTCCCAGCTTGCTTCCCCCTC...TTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CAGCAGCAGCAGGGATGCCACTCTCCCTTTGTGGAATCCTTCTTAATACAAGAGGGCAGCCAAGGACACTaGTGCCGGAGGAACGACAGG +
Preference number: 4 (lower is better)
Translates to: QQQQGCHSPFVESFLIQEGSQGH*CRRNDR
Trigger: CCTGTCGTTCCTCCGGCACCAGTGTCCTTGGCTGCC...CTCTTGTATTAAGAAGGATTCCACAAAGGGAGAGTGGCATCCCTGCTGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp AAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGTGGGAAGGCAGCCAAGGACACTaGTGCCGGAGGAACGACAGG +
Preference number: 4 (lower is better)
Translates to: KGVFMPRQGGEDLILRWEGSQGH*CRRNDR
Trigger: CCTGTCGTTCCTCCGGCACCAGTGTCCTTGGCTGCC...TTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TGCTTTAAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGCAGCCGCCTCAGACGTaGCGCAGTCGCGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: CFKGVFMPRQGGEDLILRQPPQT*RSRGER
Trigger: TCTTTCCCCGCGACTGCGCCACGTCTGAGGCGGCTG...CCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTTAAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000382762.7
3UTR CAA 72 bp GTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTaGAGGTGGGAAGAAGTCGTTGCCCTGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: VFMPRQGGEDLI*RWEEVVALPVQ
Trigger: CTGGACTGGCAGGGCAACGACTTCTTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CAA 72 bp CAGATGGAGATACAATGCAGGCAGCTGCTACCATGCTaGGTGACCAGGGTACAAGCCCCTGATGAGCTTGCC +
Preference number: 4 (lower is better)
Translates to: QMEIQCRQLLPC*VTRVQAPDELA
Trigger: GGCAAGCTCATCAGGGGCTTGTACCCTGGTCACCAAGCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CAA 72 bp CCCTCCATGGCCCAGGAAAACATGGGGGATGAAGGGTaGGCACCTGCAGTGACCAGATGGAGATACAATGCA +
Preference number: 4 (lower is better)
Translates to: PSMAQENMGDEG*APAVTRWRYNA
Trigger: TGCATTGTATCTCCATCTGGTCACTGCAGGTGCCAACCCTTCATCCCCCATGTTTTCCTGGGCCATGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp CCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACAGCAGGAAGAAGATTCCTaGCCCACAATTATCATTGCA +
Preference number: 4 (lower is better)
Translates to: PANMSSSGHRQPQPPATQQEEDS*PTIIIA
Trigger: TGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTG...CTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR TCA 90 bp TCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTGAGGCAGTTCTGGATTaGCAGGACATATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SPRESLSHMGPANMSSSGEAVLD*QDIWCG
Trigger: GCCACACCATATGTCCTGTCAATCCAGAACTGCCTC...ACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp CTTCATCCACAGCCCGTTCTCCCCAAGGGTCTCACTTCATCGAAGGCGCAGATAGAGGCAGTTCTGGATTaGCAGGACATATGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LHPQPVLPKGLTSSKAQIEAVLD*QDIWCG
Trigger: GCCACACCATATGTCCTGTCAATCCAGAACTGCCTC...TATCTGCGCCTTCGATGAAGTGAGACCCTTGGGGAGAACGGGCTGTGGATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp GAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGGGTTGGCACCTGCAGTaGCCAGATGGAGATACAATG +
Preference number: 4 (lower is better)
Translates to: ESLSHMGPANMSSSGHRQGWHLQ*PDGDTM
Trigger: CATTGTATCTCCATCTGGTCACTGCAGGTGCCAACC...CTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CTGAGTCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCATTAGACCCACGGCCATaGCACATAGAAGCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: LSLRDSKAPLQRKPLRDALDPRP*HIEASG
Trigger: ACCGGAAGCTTCTATGTGGCATGGCCGTGGGTCTAA...TGCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CTCACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTACAAGGACACGACCGTaGAGCCTTAAGATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LTGTFLCRPTEAPWPCLLTRTRP*SLKMSE
Trigger: CTCTGACATCTTAAGGCTGCACGGTCGTGTCCTTGT...AAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp GTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCACAAGGACACGACCGTaGAGCCTTAAGATGTCAGAG +
Preference number: 4 (lower is better)
Translates to: VPFTHGTSQHELIRSQAATRTRP*SLKMSE
Trigger: CTCTGACATCTTAAGGCTGCACGGTCGTGTCCTTGT...GGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp GGCACCTGCAGTGACCAGATGGAGATACAATGCAGGCAGCTGCTACCATGCTTGATGGCCAGGAGTAACTaGCATCTCCAGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GTCSDQMEIQCRQLLPCLMARSN*HLQGEK
Trigger: CTTCTCACCCTGGAGATGGCAGTTACTCCTGGCCAT...CAAGCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp AAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGTGGGAAGTAGGGAGGGCATCCTaGAGAGGCTGGGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: KGVFMPRQGGEDLILRWEVGRAS*RGWGQG
Trigger: TCCTTGTCCCCAGCCTCTGCAGGATGCCCTCCCTAC...TTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GGGAAGAAGTCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGCTTGGATCACAGACATaGCCTCACCCAGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: GKKSLPCQSSGLNMNPAQLGSQT*PHPDKD
Trigger: GTCCTTGTCTGGGTGAGGCCATGTCTGTGATCCAAG...CTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TCAGTTCCAGGAACCTTGGATCACAGACATGGCCTCACCCAGACAAGGACACGAGATAACACAGTAGGGTaGCCTCCACTGGTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SVPGTLDHRHGLTQTRTRDNTVG*PPLVCP
Trigger: TGGGCAGACCAGTGGAGGCCACCCTACTGTGTTATC...TCGTGTCCTTGTCTGGGTGAGGCCATGTCTGTGATCCAAGGTTCCTGGAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CTGAGTCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCAGCCCTGCCAGTCCAGTaGTTTGAACATGAATCCAGC +
Preference number: 4 (lower is better)
Translates to: LSLRDSKAPLQRKPLRDAALPVQ*FEHESS
Trigger: GCTGGATTCATGTTCAAACCACTGGACTGGCAGGGC...TGCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CTGAGTCTGAGAGACAGCAAAGCACCTCTCCAGCGAAAGCCACTCCGAGATGCAGACCTCATCTTGAGGTaGGAAGAAGTCGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSLRDSKAPLQRKPLRDADLILR*EEVVAL
Trigger: CAGGGCAACGACTTCTTCCCACCTCAAGATGAGGTC...TGCATCTCGGAGTGGCTTTCGCTGGAGAGGTGCTTTGCTGTCTCTCAGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CTGCCTGCTTTGCCTGACTCTGAAATGCCAGACAGGCCCATTTCTAGGTCTGTTAGGGCAAGAAGAAGGTaGACCCCACTCCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LPALPDSEMPDRPISRSVRARRR*TPLLQE
Trigger: CTCCTGGAGGAGTGGGGTCCACCTTCTTCTTGCCCT...AACAGACCTAGAAATGGGCCTGTCTGGCATTTCAGAGTCAGGCAAAGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TTGGTTTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATGGCCCAGGAAAACATaGGGGATGAAGGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LVSPRESLSHMGPANMSSWPRKT*GMKGWH
Trigger: GTGCCAACCCTTCATCCCCCATGTTTTCCTGGGCCA...TGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
3UTR CAA 72 bp ATTAGACCCACGGCCATGCCACATAGAAGCTTCCGGTaGTCTTGTCCGGACCTTGCCATTGTGGAAAAGCGC +
Preference number: 4 (lower is better)
Translates to: IRPTAMPHRSFR*SCPDLAIVEKR
Trigger: GCGCTTTTCCACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATGTGGCATGGCCGTGGGTCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000332865.10
CDS-3UTR TCA 90 bp ACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACACAGGAAGAAGATTCCTaGCCCACAATTATCATTGCA +
Preference number: 4 (lower is better)
Translates to: TSQHELIRSQAAAASCHTQEEDS*PTIIIA
Trigger: TGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTG...TGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR TCA 90 bp AAGCCCCTGATGAGCTTGCCATGGCAGCCAAGGACACTGGTGCCGGAGGAACGACAGGAAGAAGATTCCTaGCCCACAATTATCATTGCA +
Preference number: 4 (lower is better)
Translates to: KPLMSLPWQPRTLVPEERQEEDS*PTIIIA
Trigger: TGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTG...TCGTTCCTCCGGCACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp AATTATGGGATACAGCCTAGCAGTTTGTCCTCACTTGGCAGAGTAGGTAACCCTCTGCCATCTCCAGGGTaGGAAGCCTCGGTCGGAGGA +
Preference number: 4 (lower is better)
Translates to: NYGIQPSSLSSLGRVGNPLPSPG*EASVGG
Trigger: TCCTCCGACCGAGGCTTCTCACCCTGGAGATGGCAG...AGGGTTACCTACTCTGCCAAGTGAGGACAAACTGCTAGGCTGTATCCCATAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp AGGCTGCAGTCCACTCCTTCATCCACAGCCCGTTCTCCCCAAGGGTCTCACTTCGTGCTGGGTAGATCCTaGATCCTGAGAATACAAGTT +
Preference number: 4 (lower is better)
Translates to: RLQSTPSSTARSPQGSHFVLGRS*ILRIQV
Trigger: AACTTGTATTCTCAGGATTCAGGATCTACCCAGCAC...GAAGTGAGACCCTTGGGGAGAACGGGCTGTGGATGAAGGAGTGGACTGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp ACCAGGGTACAAGCCCCTGATGAGCTTGCCATGGCAGCCAAGGACACTGGTGCCCTAGGTCTGTTCTCCTaGAAATACATCTTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TRVQAPDELAMAAKDTGALGLFS*KYIFGA
Trigger: AGCACCAAAGATGTATTTTCAGGAGAACAGACCTAG...GGCACCAGTGTCCTTGGCTGCCATGGCAAGCTCATCAGGGGCTTGTACCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp GTTTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTTGGCACCTGCAGTaGCCAGATGGAGATACAATG +
Preference number: 4 (lower is better)
Translates to: VSPRESLSHMGPANMSSSGWHLQ*PDGDTM
Trigger: CATTGTATCTCCATCTGGTCACTGCAGGTGCCAACC...TGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTGTCTTGTCCGGACCTTaGCATTGTGGAAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: SPRESLSHMGPANMSSSGVLSGP*HCGKAL
Trigger: AAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGAC...ACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
CDS-3UTR GCA 90 bp GCCTCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGACCACTGGTCTGCCCATaGTCAGCAACCATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ASCHTGRRFLTHNYHCKGPLVCP*SATMAR
Trigger: CCTGGCCATGGTTGCTGAGCATGGGCAGACCAGTGG...TCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGAGGCAGGGAAGACCCTaGCTGCCCTTGGCACCCACA +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQRQGRP*LPLAPT
Trigger: TGTGGGTGCCAAGGGCAGCCAGGGTCTTCCCTGCCT...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR CCA 90 bp GTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGTACAGATGAATCCAGCCCAGTaGACAGGGAAGGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VSGITVSKPHSFTGSGVQMNPAQ*TGKAQG
Trigger: TCCCTGGGCCTTCCCTGTCCACTGGGCTGGATTCAT...CTGTACACCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGTACAGGCAGGCATCAGGCTGTaGCTGATCTGTGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: VSGITVSKPHSFTGSGVQAGIRL*LICGQP
Trigger: AGGCTGACCACAGATCAGCCACAGCCTGATGCCTGC...CTGTACACCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGATGAGTCAACCTTGCTaGGTGAGAAGTGAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LSHMGPANMSSSGHRQPQMSQPC*VRSELA
Trigger: TGCAAGCTCACTTCTCACCCAGCAAGGTTGACTCAT...CTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp ACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTTGCATGAGTCAACCTTGCTaGGTGAGAAGTGAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: TGTFLCRPTEAPWPCLLCMSQPC*VRSELA
Trigger: TGCAAGCTCACTTCTCACCCAGCAAGGTTGACTCAT...GCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CAGCAGCAGCAGGGATGCCACTCTCCCTTTGTGGAATCCTTCTTAATACAAGAGGAGCAGGCACCACCATaGAAAGAGCACCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: QQQQGCHSPFVESFLIQEEQAPP*KEHLGC
Trigger: ACACCCCAGGTGCTCTTTCCATGGTGGTGCCTGCTC...CTCTTGTATTAAGAAGGATTCCACAAAGGGAGAGTGGCATCCCTGCTGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TGCTTTAAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGTGTACAGGGCTGAGCTaGAGGGTTAGGGTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CFKGVFMPRQGGEDLILRCTGLS*RVRVRA
Trigger: GGCCCTGACCCTAACCCTCCAGCTCAGCCCTGTACA...CCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTTAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp GCCTCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGATGGGACCAGCCAACATaGGCTCATCAGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: ASCHTGRRFLTHNYHCKGWDQPT*AHQVTG
Trigger: GCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCA...TCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR TCA 90 bp GTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGTACAGATAGTCCCCAGGGAGTaGCTGGGAGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: VSGITVSKPHSFTGSGVQIVPRE*LGGRRL
Trigger: CAATCTTCTGCCTCCCAGTCACTCCCTGGGGACTAT...CTGTACACCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp TTAAGATGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGGTGGCCTTCTTAATACAAGAGTaGGAAGCAGAAGAGCAAACC +
Preference number: 4 (lower is better)
Translates to: LRCQSPKRGEKGCKPQVAFLIQE*EAEEQT
Trigger: GGTTTGCTCTTCTGCTTCTCACTCTTGTATTAAGAA...GGCCACCTGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACATCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp TTTACTGGTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGCCCTGGCTCTCACACTaGGCCCCCAAGAGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: FTGVRDYSQQTPLIYRVRPWLSH*APKSPF
Trigger: AAAAGGACTCTTGGGGGCTCAGTGTGAGAGCCAGGG...CCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACACCAGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TCAGTTCCAGGAACCTTGGATCACAGACATGGCCTCACCCAGACAAGGACACGAAAGAAGTCGTTGCCCTaGCAGTCCAGTGGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: SVPGTLDHRHGLTQTRTRKKSLP*QSSGLN
Trigger: GTTCAAACCACTGGACTGGCAGGGCAACGACTTCTT...TCGTGTCCTTGTCTGGGTGAGGCCATGTCTGTGATCCAAGGTTCCTGGAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp ATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACAGGAAGAAGATTTAAAGGTGTTTTTATaGCAAGACAAGGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: MSSSGHRQPQPPATQEEDLKVFL*QDKGAR
Trigger: CCTCGCCCCCTTGTCTTGGCATAAAAACACCTTTAA...ATCTTCTTCCTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CTGCCTGCTTTGCCTGACTCTGAAATGCCAGACAGGCCCATTTCTAGGTCTGTTAGGCAGCTGCTACCATaGTTGGTGACCAGGGTACAA +
Preference number: 4 (lower is better)
Translates to: LPALPDSEMPDRPISRSVRQLLP*LVTRVQ
Trigger: TTGTACCCTGGTCACCAAGCATGGTAGCAGCTGCCT...AACAGACCTAGAAATGGGCCTGTCTGGCATTTCAGAGTCAGGCAAAGCAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTAAGGCAGGGAAGACCCTaGCTGCCCTTGGCACCCACA +
Preference number: 4 (lower is better)
Translates to: SCHTGRRFLTHNYHCKGVRQGRP*LPLAPT
Trigger: TGTGGGTGCCAAGGGCAGCCAGGGTCTTCCCTGCCT...TACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CCA 90 bp GGTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGTACACTCAGCCAGGTACAATaGAGGGTCCAGGTCACAAGG +
Preference number: 4 (lower is better)
Translates to: GVRDYSQQTPLIYRVRCTLSQVQ*RVQVTR
Trigger: CCTTGTGACCTGGACCCTCCATTGTACCTGGCTGAG...TGTACACCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp AATTATGGGATACAGCCTAGCAGTTTGTCCTCACTTGGCAGAGTAGGTAACCCTTGGGACCAGCCAACATaGGCTCATCAGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: NYGIQPSSLSSLGRVGNPWDQPT*AHQVTG
Trigger: GCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCA...AGGGTTACCTACTCTGCCAAGTGAGGACAAACTGCTAGGCTGTATCCCATAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp CCCACGGCCATGCCACATAGAAGCTTCCGGTTGTCTTGTCCGGACCTTGCCATTGTAGATCCTGAATCCTaGGAATACAAGTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PTAMPHRSFRLSCPDLAIVDPES*EYKFLL
Trigger: GAGCAGAAACTTGTATTCTCAGGATTCAGGATCTAC...AATGGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATGTGGCATGGCCGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR TCA 90 bp TTTACTGGTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGATAGTCCCCAGGGAGTaGCTGGGAGGCAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: FTGVRDYSQQTPLIYRVRIVPRE*LGGRRL
Trigger: CAATCTTCTGCCTCCCAGTCACTCCCTGGGGACTAT...CCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACACCAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CTCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTGCAGCCGCAGCCTCCTaGCACACAGGAAGAAGATTC +
Preference number: 4 (lower is better)
Translates to: LLPHRKKIPDPQLSLQRSAAAAS*HTGRRF
Trigger: GAATCTTCTTCCTGTGTGGCAGGAGGCTGCGGCTGC...ACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR GCA 90 bp GCCTTGGTTTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCGAGAATACAAGTTTCTaGTCCTGGATACACAGTCAC +
Preference number: 4 (lower is better)
Translates to: ALVSPRESLSHMGPANMSENTSF*SWIHSH
Trigger: GTGACTGTGTATCCAGGAGCAGAAACTTGTATTCTC...GCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAAACCAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CAAAGTGGGGCTGCAGGCATCAGGCTGTGGCTGATCTGTGGTCAGCCTGGAGCTGAAGCACATGGCTCATaGTTTAAAGGTGTTTTTATG +
Preference number: 4 (lower is better)
Translates to: QSGAAGIRLWLICGQPGAEAHGS*FKGVFM
Trigger: CATAAAAACACCTTTAAAGCATGAGCCATGTGCTTC...AGCTCCAGGCTGACCACAGATCAGCCACAGCCTGATGCCTGCAGCCCCACTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGCTGAGCCCGAACCCATaGAGAACGATCTCACAGGGG +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQLSPNP*RTISQG
Trigger: CCCCTGTGAGATCGTTCTGCATGGGTTCGGGCTCAG...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486280.1
CDS-3UTR CCA 90 bp TGCTTTAAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGCGGACCTTGCCATTGTaGAAAAGCGCTTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: CFKGVFMPRQGGEDLILRRTLPL*KSASRS
Trigger: GGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCG...CCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTTAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GGGAAGAAGTCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGACAAGTTTCTGCTCCTaGATACACAGTCACATGACC +
Preference number: 4 (lower is better)
Translates to: GKKSLPCQSSGLNMNPAQTSFCS*IHSHMT
Trigger: GGTCATGTGACTGTGTATCCAGGAGCAGAAACTTGT...CTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GCCAGGAGTAACTGCCATCTCCAGGGTGAGAAGCCTCGGTCGGAGGAGATGACACTGAAAATACATCTTTaGTGCTGGGTAGATCCTGAA +
Preference number: 4 (lower is better)
Translates to: ARSNCHLQGEKPRSEEMTLKIHL*CWVDPE
Trigger: TTCAGGATCTACCCAGCACCAAAGATGTATTTTCAG...TGTCATCTCCTCCGACCGAGGCTTCTCACCCTGGAGATGGCAGTTACTCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTAGCATCCTGCAGAGGCTaGGGACAAGGAGGATGGCAC +
Preference number: 4 (lower is better)
Translates to: SCHTGRRFLTHNYHCKGVASCRG*GQGGWH
Trigger: GTGCCATCCTCCTTGTCCCCAGCCTCTGCAGGATGC...TACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TGCTTTAAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGCTCAGCCAGGTACAATaGAGGGTCCAGGTCACAAGG +
Preference number: 4 (lower is better)
Translates to: CFKGVFMPRQGGEDLILRLSQVQ*RVQVTR
Trigger: CCTTGTGACCTGGACCCTCCATTGTACCTGGCTGAG...CCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTTAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGAGGGCAAGAAGAAGGTaGACCCCACTCCTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQRARRR*TPLLQE
Trigger: CTCCTGGAGGAGTGGGGTCCACCTTCTTCTTGCCCT...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp TCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTTCCTTTTGGTTTTACTaGTGTCAGGGATTACAGTCA +
Preference number: 4 (lower is better)
Translates to: SHMGPANMSSSGHRQPQPSFWFY*CQGLQS
Trigger: TGACTGTAATCCCTGACACCAGTAAAACCAAAAGGA...AGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp GCCTCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAATCACACAGAAGTGGTaGTTTGACCACCCACCCGCA +
Preference number: 4 (lower is better)
Translates to: ASCHTGRRFLTHNYHCKGITQKW*FDHPPA
Trigger: TGCGGGTGGGTGGTCAAATCACCACTTCTGTGTGAT...TCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR TCA 90 bp TTTACTGGTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGGGCTGGTCATGCTTGTaGAATCCGAGTCCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: FTGVRDYSQQTPLIYRVRGWSCL*NPSPKG
Trigger: TCCCTTAGGACTCGGATTTCACAAGCATGACCAGCC...CCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACACCAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR TCA 90 bp TCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTACTCGGTCGGAGGAGATaGCACCCACTTAGGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SCHTGRRFLTHNYHCKGVLGRRR*HPLRVH
Trigger: GTGAACCCTAAGTGGGTGTCATCTCCTCCGACCGAG...TACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp GCCTCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGACCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: ASCHTGRRFLTHNYHCKGPVLIL*IPIDVQ
Trigger: CTGGACATCGATAGGGATGCAGAGGATCAGAACCGG...TCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
CDS-3UTR GCA 90 bp TTTACTGGTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGATTCACCAGCTGCTCTaGTCAGACCTGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FTGVRDYSQQTPLIYRVRIHQLL*SDLASP
Trigger: TGGAGAAGCCAGGTCTGAGCAGAGCAGCTGGTGAAT...CCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACACCAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TCTCCCCAAGGGTCTCACTTCATCGAAGGCGCAGATAACACAGTAGGGTGGCCTGAGAATACAAGTTTCTaGTCCTGGATACACAGTCAC +
Preference number: 4 (lower is better)
Translates to: SPQGSHFIEGADNTVGWPENTSF*SWIHSH
Trigger: GTGACTGTGTATCCAGGAGCAGAAACTTGTATTCTC...AGGCCACCCTACTGTGTTATCTGCGCCTTCGATGAAGTGAGACCCTTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CAGCAGCAGCAGGGATGCCACTCTCCCTTTGTGGAATCCTTCTTAATACAAGAGAAGAAGTCGTTGCCCTaGCAGTCCAGTGGTTTGAAC +
Preference number: 4 (lower is better)
Translates to: QQQQGCHSPFVESFLIQEKKSLP*QSSGLN
Trigger: GTTCAAACCACTGGACTGGCAGGGCAACGACTTCTT...CTCTTGTATTAAGAAGGATTCCACAAAGGGAGAGTGGCATCCCTGCTGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp AATTATGGGATACAGCCTAGCAGTTTGTCCTCACTTGGCAGAGTAGGTAACCCTGTGGGAAGAAGTCGTTaGCCTGCCAGTCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: NYGIQPSSLSSLGRVGNPVGRSR*PASPVV
Trigger: AACCACTGGACTGGCAGGGCAACGACTTCTTCCCAC...AGGGTTACCTACTCTGCCAAGTGAGGACAAACTGCTAGGCTGTATCCCATAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGCGGACCTTGCCATTGTaGAAAAGCGCTTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQRTLPL*KSASRS
Trigger: GGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCG...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR CCA 90 bp TCAGTTCCAGGAACCTTGGATCACAGACATGGCCTCACCCAGACAAGGACACGAACAAGTTTCTGCTCCTaGATACACAGTCACATGACC +
Preference number: 4 (lower is better)
Translates to: SVPGTLDHRHGLTQTRTRTSFCS*IHSHMT
Trigger: GGTCATGTGACTGTGTATCCAGGAGCAGAAACTTGT...TCGTGTCCTTGTCTGGGTGAGGCCATGTCTGTGATCCAAGGTTCCTGGAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp TTGGTTTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCAGTAGATCCTGAATCCTaGGAATACAAGTTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LVSPRESLSHMGPANMSSVDPES*EYKFLL
Trigger: GAGCAGAAACTTGTATTCTCAGGATTCAGGATCTAC...TGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp AATTATGGGATACAGCCTAGCAGTTTGTCCTCACTTGGCAGAGTAGGTAACCCTGGCTGGTCATGCTTGTaGAATCCGAGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: NYGIQPSSLSSLGRVGNPGWSCL*NPSPCH
Trigger: ATGGCATGGACTCGGATTTCACAAGCATGACCAGCC...AGGGTTACCTACTCTGCCAAGTGAGGACAAACTGCTAGGCTGTATCCCATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382762.7
CDS-3UTR TCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGGGCTGGTCATGCTTGTaGAATCCGAGTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQGWSCL*NPSPCH
Trigger: ATGGCATGGACTCGGATTTCACAAGCATGACCAGCC...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382762.7
ENST00000486280.1
CDS-3UTR GCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGCCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQPVLIL*IPIDVQ
Trigger: CTGGACATCGATAGGGATGCAGAGGATCAGAACCGG...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
CDS-3UTR GCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGTTAGACCCACGGCCATaGCACATAGAAGCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQLDPRP*HIEASG
Trigger: ACCGGAAGCTTCTATGTGGCATGGCCGTGGGTCTAA...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR GCA 90 bp TCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTACTGGGATTCACCAGCTaGTCTGCTCAGACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SCHTGRRFLTHNYHCKGVLGFTS*SAQTWL
Trigger: AAGCCAGGTCTGAGCAGAGCAGCTGGTGAATCCCAG...TACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTATGGCTAGGCCAAGGCTaGAGTCCACTCCTTCATCCA +
Preference number: 4 (lower is better)
Translates to: SCHTGRRFLTHNYHCKGVWLGQG*SPLLHP
Trigger: TGGATGAAGGAGTGGACTGCAGCCTTGGCCTAGCCA...TACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTAAAATACATCTTTGGTaGTGGGTAGATCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: SPRESLSHMGPANMSSSGKIHLW*WVDPES
Trigger: GGATTCAGGATCTACCCAGCACCAAAGATGTATTTT...ACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp AAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGTGGGAATGCCTGACTCTGAAATaGCAGACAGGCCCATTTCTA +
Preference number: 4 (lower is better)
Translates to: KGVFMPRQGGEDLILRWECLTLK*QTGPFL
Trigger: TAGAAATGGGCCTGTCTGGCATTTCAGAGTCAGGCA...TTCCCACCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGTGGACAGGGGAAGCACATGGCTCATaGTTTAAAGGTGTTTTTATG +
Preference number: 4 (lower is better)
Translates to: SLPCQSSGLNMNPAQWTGEAHGS*FKGVFM
Trigger: CATAAAAACACCTTTAAAGCATGAGCCATGTGCTTC...CCCTGTCCACTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTATTCGCTTCACGCTCCCATaGCATCCAGGTACCGGTTCT +
Preference number: 4 (lower is better)
Translates to: LPHRKKIPDPQLSLQRSIRFTLP*HPGTGS
Trigger: AGAACCGGTACCTGGATGGCATGGGAGCGTGAAGCG...AATACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332865.10
CDS-3UTR CCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGCTCACGTCCTTGCCCTaGACAAGAAGTAGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQLTSLP*TRSRRG
Trigger: TCCTCTCCTACTTCTTGTCCAGGGCAAGGACGTGAG...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR CCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGCTTGGATCACAGACATaGCCTCACCCAGACAAGGAC +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQLGSQT*PHPDKD
Trigger: GTCCTTGTCTGGGTGAGGCCATGTCTGTGATCCAAG...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp GAAGTCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGTGGACCTGAAAATACATCTTTaGTGCTGGGTAGATCCTGAA +
Preference number: 4 (lower is better)
Translates to: EVVALPVQWFEHESSPVDLKIHL*CWVDPE
Trigger: TTCAGGATCTACCCAGCACCAAAGATGTATTTTCAG...GTCCACTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTATTGCTGTGGCTGATCTGTaGTCAGCCTGGAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LPHRKKIPDPQLSLQRSIAVADL*SAWSSE
Trigger: CTCTGAGCTCCAGGCTGACCACAGATCAGCCACAGC...AATACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CTCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTCATGGAAAGAGCACCTaGGGTGTAGCTGGTTACCAC +
Preference number: 4 (lower is better)
Translates to: LLPHRKKIPDPQLSLQRSHGKST*GVAGYH
Trigger: GTGGTAACCAGCTACACCCCAGGTGCTCTTTCCATG...ACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CCA 90 bp CAACAGCAAAGCCCCAGAGACATGGAGGCAGATGAGTCAACCTTGCTGGGTGAGTCCTTTTGGTTTTACTaGTGTCAGGGATTACAGTCA +
Preference number: 4 (lower is better)
Translates to: QQQSPRDMEADESTLLGESFWFY*CQGLQS
Trigger: TGACTGTAATCCCTGACACCAGTAAAACCAAAAGGA...CTCACCCAGCAAGGTTGACTCATCTGCCTCCATGTCTCTGGGGCTTTGCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp CTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTATTGCGAGGACCTCATCTTaGGGTGGGAAGAAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: LPHRKKIPDPQLSLQRSIARTSS*GGKKSL
Trigger: CAACGACTTCTTCCCACCTCAAGATGAGGTCCTCGC...AATACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGGTCTTGTCCGGACCTTaGCATTGTGGAAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQVLSGP*HCGKAL
Trigger: AAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGAC...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR GCA 90 bp GTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGTACAGTTAAAGGTGTTTTTATaGCAAGACAAGGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VSGITVSKPHSFTGSGVQLKVFL*QDKGAR
Trigger: CCTCGCCCCCTTGTCTTGGCATAAAAACACCTTTAA...CTGTACACCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp TGCTTTAAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGCAGATGAGTCAACCTTaGTGGGTGAGAAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: CFKGVFMPRQGGEDLILRQMSQP*WVRSEL
Trigger: AAGCTCACTTCTCACCCAGCAAGGTTGACTCATCTG...CCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTTAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp AATTATGGGATACAGCCTAGCAGTTTGTCCTCACTTGGCAGAGTAGGTAACCCTCAGATGAGTCAACCTTaGTGGGTGAGAAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: NYGIQPSSLSSLGRVGNPQMSQP*WVRSEL
Trigger: AAGCTCACTTCTCACCCAGCAAGGTTGACTCATCTG...AGGGTTACCTACTCTGCCAAGTGAGGACAAACTGCTAGGCTGTATCCCATAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR TCA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGCAGGAAGAAGATTCCTaGCCCACAATTATCATTGCA +
Preference number: 4 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQQEEDS*PTIIIA
Trigger: TGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTG...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR TCA 90 bp GCCTCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGATTCTTAATACAAGAGTaGGAAGCAGAAGAGCAAACC +
Preference number: 4 (lower is better)
Translates to: ASCHTGRRFLTHNYHCKGFLIQE*EAEEQT
Trigger: GGTTTGCTCTTCTGCTTCTCACTCTTGTATTAAGAA...TCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTATTTGCCTGACTCTGAAATaGCAGACAGGCCCATTTCTA +
Preference number: 4 (lower is better)
Translates to: LPHRKKIPDPQLSLQRSICLTLK*QTGPFL
Trigger: TAGAAATGGGCCTGTCTGGCATTTCAGAGTCAGGCA...AATACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR GCA 90 bp CTCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTAAAATACATCTTTGGTaGTGGGTAGATCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: LLPHRKKIPDPQLSLQRSKIHLW*WVDPES
Trigger: GGATTCAGGATCTACCCAGCACCAAAGATGTATTTT...ACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp CATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCTTGAGCCTGGTGACTTaGGAGGCCAGGCTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: HGTSQHELIRSQAAAASCLSLVT*EARLSA
Trigger: GGCTGACAGCCTGGCCTCCAAAGTCACCAGGCTCAA...GCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CAA 90 bp TTAAGATGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGGTGGCCTTGAGCCTGGTGACTTaGGAGGCCAGGCTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: LRCQSPKRGEKGCKPQVALSLVT*EARLSA
Trigger: GGCTGACAGCCTGGCCTCCAAAGTCACCAGGCTCAA...GGCCACCTGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACATCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp GGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACATCCAGGGCGAGCGATTaGAGCCTGGTGACTTTGGAG +
Preference number: 5 (lower is better)
Translates to: GPANMSSSGHRQPQPPATSRASD*SLVTLE
Trigger: CTCCAAAGTCACCAGGCTCAAATCGCTCGCCCTGGA...TGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
CDS-3UTR CAA 90 bp CATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCGTCCGGACCTTGCCATaGTGGAAAAGCGCTTCACGC +
Preference number: 5 (lower is better)
Translates to: HGTSQHELIRSQAAAASCVRTLP*WKSASR
Trigger: GCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGAC...GCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CAA 90 bp CCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACAGCACTGGCTCACGTCCTaGCCCTGGACAAGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: PANMSSSGHRQPQPPATQHWLTS*PWTRSR
Trigger: CCTACTTCTTGTCCAGGGCAAGGACGTGAGCCAGTG...CTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS CCA 90 bp CTCCCCAGACCAGATAAACCCTGCCAACAACTCTGCCAGACACAGTaGGGCTGCAGCAGACAGAAAGGTCCAGGTGTCAGCTGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LPRPDKPCQQLCQTQ*GCSRQKGPGVSWGL
Trigger: GAGGCCCCAGCTGACACCTGGACCTTTCTGTCTGCTGCAGCCCCACTGTGTCTGGCAGAGTTGTTGGCAGGGTTTATCTGGTCTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479463.1
CDS-3UTR CAA 90 bp GGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACCTGTCAGCCATTCGCTaGTTCTCCCGGTCTAGAATC +
Preference number: 5 (lower is better)
Translates to: GTSQHELIRSQAAAASCHLSAIR*FSRSRI
Trigger: GATTCTAGACCGGGAGAACAAGCGAATGGCTGACAG...GTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS TCA 90 bp ACACGCACACCGTGGGCCCTTACCATGCCATCCAGGTACCGGTTCTaGTCCTCTGCATCCCTATCGATGTCCAGGGCGAGCGATTTGAGC +
Preference number: 5 (lower is better)
Translates to: TRTPWALTMPSRYRF*SSASLSMSRASDLS
Trigger: GCTCAAATCGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGTAAGGGCCCACGGTGTGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS TCA 90 bp ACACGCACACCGTGGGCCCTTACCATGCCATCCAGGTACCGGTTCTaGTCCTCTGCATCCCTATCGATGTCCAGGGCGAGCTGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: TRTPWALTMPSRYRF*SSASLSMSRASCSA
Trigger: TGCTGAACAGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGTAAGGGCCCACGGTGTGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479463.1
CDS GCA 90 bp ACCGTGGGCCCTTACCATGCCATCCAGGTACCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAGGGCGAGCGATTTGAGCCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: TVGPYHAIQVPVLIL*IPIDVQGERFEPGD
Trigger: GTCACCAGGCTCAAATCGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGTAAGGGCCCACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS GCA 90 bp AGCGCTTCACGCTCCCATGCCATCCAGGTACCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAGGGCGAGCGATTTGAGCCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: SASRSHAIQVPVLIL*IPIDVQGERFEPGD
Trigger: GTCACCAGGCTCAAATCGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGGAGCGTGAAGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332865.10
CDS CCA 90 bp CCAGGTGTCAGCTGGGGCCTCATGCAGGTGAGCACAGCCACGAATTaGATGAGGATGGAAAACTGCCTGAAACTCCTCTGGGCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: PGVSWGLMQVSTATN*MRMENCLKLLWALC
Trigger: GCAGAGGGCCCAGAGGAGTTTCAGGCAGTTTTCCATCCTCATCCAATTCGTGGCTGTGCTCACCTGCATGAGGCCCCAGCTGACACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479463.1
CDS-3UTR CAA 90 bp ATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACACAGGAAGAAGATTTGAGCCTGGTGACTTaGGAGGCCAGGCTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: MSSSGHRQPQPPATQEEDLSLVT*EARLSA
Trigger: GGCTGACAGCCTGGCCTCCAAAGTCACCAGGCTCAA...ATCTTCTTCCTGTGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CAA 90 bp TGCAGCCTTAAGATGTCAGAGTCCCAAGCGCGGGGAGAAGGGCTGCAAGCCACAGTCCGGACCTTGCCATaGTGGAAAAGCGCTTCACGC +
Preference number: 5 (lower is better)
Translates to: CSLKMSESQARGEGLQATVRTLP*WKSASR
Trigger: GCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGAC...TGTGGCTTGCAGCCCTTCTCCCCGCGCTTGGGACTCTGACATCTTAAGGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp CATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCTGTCTTGTCCGGACCTaGCCATTGTGGAAAAGCGCT +
Preference number: 5 (lower is better)
Translates to: HGTSQHELIRSQAAAASCCLVRT*PLWKSA
Trigger: AGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACA...GCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CAA 90 bp CATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCTGCCAGTCCAGTGGTTaGAACATGAATCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: HGTSQHELIRSQAAAASCCQSSG*NMNPAQ
Trigger: CTGGGCTGGATTCATGTTCAAACCACTGGACTGGCA...GCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp GGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGCCTCCTGCCACATGCCAGTCCAGTGGTTaGAACATGAATCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: GPANMSSSGHRQPQPPATCQSSG*NMNPAQ
Trigger: CTGGGCTGGATTCATGTTCAAACCACTGGACTGGCA...TGTGGCAGGAGGCTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp TCCGGACCTTGCCATTGTGGAAAAGCGCTTCACGCTCCCTGTAAGCAGGCTGGTGGTGGGAAGAAGTCGTaGCCCTGCCAGTCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: SGPCHCGKALHAPCKQAGGGKKS*PCQSSG
Trigger: ACCACTGGACTGGCAGGGCAACGACTTCTTCCCACC...ACCAGCCTGCTTACAGGGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR CAA 90 bp GGCCAAGGCTGCAGTCCACTCCTTCATCCACAGCCCGTTCTCCCCAAGGGTCTCTGGAGAAAGGTAGGCTaGCTGTGTGGAAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GQGCSPLLHPQPVLPKGLWRKVG*LCGRKE
Trigger: CTCCTTCCTTCCACACAGCAAGCCTACCTTTCTCCA...GAGACCCTTGGGGAGAACGGGCTGTGGATGAAGGAGTGGACTGCAGCCTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS GCA 90 bp ACCGTGGGCCCTTACCATGCCATCCAGGTACCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAGGGCGAGCTGTTCAGCAGACAGAGA +
Preference number: 5 (lower is better)
Translates to: TVGPYHAIQVPVLIL*IPIDVQGELFSRQR
Trigger: TCTCTGTCTGCTGAACAGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGTAAGGGCCCACGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479463.1
CDS-3UTR CAA 90 bp CTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCGCAGTCCAGGGCGAGCGATTaGAGCCTGGTGACTTTGGAG +
Preference number: 5 (lower is better)
Translates to: LSHMGPANMSSSGHRQPQSRASD*SLVTLE
Trigger: CTCCAAAGTCACCAGGCTCAAATCGCTCGCCCTGGA...CTGCGGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
CDS-3UTR CAA 90 bp GTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCCACTGGCTCACGTCCTaGCCCTGGACAAGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: VPFTHGTSQHELIRSQAAHWLTS*PWTRSR
Trigger: CCTACTTCTTGTCCAGGGCAAGGACGTGAGCCAGTG...GGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CAA 90 bp CTCACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTCAGCTGCTACCATGCTaGGTGACCAGGGTACAAGCC +
Preference number: 5 (lower is better)
Translates to: LTGTFLCRPTEAPWPCLLQLLPC*VTRVQA
Trigger: GGCTTGTACCCTGGTCACCAAGCATGGTAGCAGCTG...AAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS TCA 90 bp TGTGGAAAAGCGCTTCACGCTCCCATGCCATCCAGGTACCGGTTCTaGTCCTCTGCATCCCTATCGATGTCCAGGGCGAGCGATTTGAGC +
Preference number: 5 (lower is better)
Translates to: CGKALHAPMPSRYRF*SSASLSMSRASDLS
Trigger: GCTCAAATCGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGGAGCGTGAAGCGCTTTTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332865.10
CDS-3UTR CAA 90 bp TTGGTTTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATTGAGCCTGGTGACTTaGGAGGCCAGGCTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: LVSPRESLSHMGPANMSSLSLVT*EARLSA
Trigger: GGCTGACAGCCTGGCCTCCAAAGTCACCAGGCTCAA...TGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CAA 90 bp GTTGGCACCTGCAGTGACCAGATGGAGATACAATGCAGGCAGCTGCTACCATGCTCCAGGGCGAGCGATTaGAGCCTGGTGACTTTGGAG +
Preference number: 5 (lower is better)
Translates to: VGTCSDQMEIQCRQLLPCSRASD*SLVTLE
Trigger: CTCCAAAGTCACCAGGCTCAAATCGCTCGCCCTGGA...GCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGTGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp GAAGTCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGTGGACCACAGAAGTGGTGATTaGACCACCCACCCGCACCAG +
Preference number: 5 (lower is better)
Translates to: EVVALPVQWFEHESSPVDHRSGD*TTHPHQ
Trigger: CTGGTGCGGGTGGGTGGTCAAATCACCACTTCTGTG...GTCCACTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR CAA 90 bp ACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTTGCGGCGAGGACCTCATCTaGAGGTGGGAAGAAGTCGTT +
Preference number: 5 (lower is better)
Translates to: TGTFLCRPTEAPWPCLLCGEDLI*RWEEVV
Trigger: AACGACTTCTTCCCACCTCAAGATGAGGTCCTCGCC...GCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS TCA 90 bp GTCCTAAGGGAGGAATCCCAGCAAGATCACACAGAAGTGGTGATTTaGCCACCCACCCGCACCAGTGCTGAAGGAGACACTGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: VLREESQQDHTEVVI*PPTRTSAEGDTAGS
Trigger: AGAGCCTGCAGTGTCTCCTTCAGCACTGGTGCGGGTGGGTGGTCAAATCACCACTTCTGTGTGATCTTGCTGGGATTCCTCCCTTAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000479463.1
CDS GCA 90 bp TGTGAAATCCGAGTCCATGCCATCCAGGTACCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAGGGCGAGCGATTTGAGCCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: CEIRVHAIQVPVLIL*IPIDVQGERFEPGD
Trigger: GTCACCAGGCTCAAATCGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGACTCGGATTTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382762.7
ENST00000486280.1
CDS GCA 90 bp GCTGTCCTGAAATACCATGCCATCCAGGTACCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAGGGCGAGCGATTTGAGCCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: AVLKYHAIQVPVLIL*IPIDVQGERFEPGD
Trigger: GTCACCAGGCTCAAATCGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGTATTTCAGGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410108.5
CDS-3UTR CAA 90 bp ACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTTGCCTGTCAGCCATTCGCTaGTTCTCCCGGTCTAGAATC +
Preference number: 5 (lower is better)
Translates to: TGTFLCRPTEAPWPCLLCLSAIR*FSRSRI
Trigger: GATTCTAGACCGGGAGAACAAGCGAATGGCTGACAG...GCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp GTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAGGCAGCCCTGTCAGCCATTCGCTaGTTCTCCCGGTCTAGAATC +
Preference number: 5 (lower is better)
Translates to: VPFTHGTSQHELIRSQAALSAIR*FSRSRI
Trigger: GATTCTAGACCGGGAGAACAAGCGAATGGCTGACAG...GGCTGCCTGTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CAA 90 bp CCACATAGAAGCTTCCGGTTGTCTTGTCCGGACCTTGCCATTGTGGAAAAGCGCGTCCGGACCTTGCCATaGTGGAAAAGCGCTTCACGC +
Preference number: 5 (lower is better)
Translates to: PHRSFRLSCPDLAIVEKRVRTLP*WKSASR
Trigger: GCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGAC...GCGCTTTTCCACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000332865.10
CDS-3UTR CAA 90 bp AGGCCACAATTAGACCCACGGCCATGCCACATAGAAGCTTCCGGTTGTCTTGTCGTCCGGACCTTGCCATaGTGGAAAAGCGCTTCACGC +
Preference number: 5 (lower is better)
Translates to: RPQLDPRPCHIEASGCLVVRTLP*WKSASR
Trigger: GCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGAC...GACAAGACAACCGGAAGCTTCTATGTGGCATGGCCGTGGGTCTAATTGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000332865.10
CDS-3UTR CAA 90 bp TGGGGTGTAGCTGGTTACCACAGCTCAGCCACATTCCCCAGAAACGGAGGTCAGTGTCTTGTCCGGACCTaGCCATTGTGGAAAAGCGCT +
Preference number: 5 (lower is better)
Translates to: WGVAGYHSSATFPRNGGQCLVRT*PLWKSA
Trigger: AGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACA...CTGACCTCCGTTTCTGGGGAATGTGGCTGAGCTGTGGTAACCAGCTACACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp GCCTTGGTTTCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTGTCTTGTCCGGACCTaGCCATTGTGGAAAAGCGCT +
Preference number: 5 (lower is better)
Translates to: ALVSPRESLSHMGPANMSCLVRT*PLWKSA
Trigger: AGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACA...GCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGAAACCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CAA 90 bp CCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACCATAGAAGCTTCCGGTaGTCTTGTCCGGACCTTGCC +
Preference number: 5 (lower is better)
Translates to: PRESLSHMGPANMSSSGHHRSFR*SCPDLA
Trigger: GGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATG...GTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CAA 90 bp ACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTTGCTCAGTTCCAGGAACCTaGGATCACAGACATGGCCTC +
Preference number: 5 (lower is better)
Translates to: TGTFLCRPTEAPWPCLLCSVPGT*DHRHGL
Trigger: GAGGCCATGTCTGTGATCCAAGGTTCCTGGAACTGA...GCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp GGCACCTGCAGTGACCAGATGGAGATACAATGCAGGCAGCTGCTACCATGCTTGGGCGAGGACCTCATCTaGAGGTGGGAAGAAGTCGTT +
Preference number: 5 (lower is better)
Translates to: GTCSDQMEIQCRQLLPCLGEDLI*RWEEVV
Trigger: AACGACTTCTTCCCACCTCAAGATGAGGTCCTCGCC...CAAGCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS TCA 90 bp GTCATGCTTGTGAAATCCGAGTCCATGCCATCCAGGTACCGGTTCTaGTCCTCTGCATCCCTATCGATGTCCAGGGCGAGCGATTTGAGC +
Preference number: 5 (lower is better)
Translates to: VMLVKSESMPSRYRF*SSASLSMSRASDLS
Trigger: GCTCAAATCGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGACTCGGATTTCACAAGCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382762.7
ENST00000486280.1
CDS-3UTR CAA 90 bp CTTCATCCACAGCCCGTTCTCCCCAAGGGTCTCACTTCATCGAAGGCGCAGATACTGTCAGCCATTCGCTaGTTCTCCCGGTCTAGAATC +
Preference number: 5 (lower is better)
Translates to: LHPQPVLPKGLTSSKAQILSAIR*FSRSRI
Trigger: GATTCTAGACCGGGAGAACAAGCGAATGGCTGACAG...TATCTGCGCCTTCGATGAAGTGAGACCCTTGGGGAGAACGGGCTGTGGATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp GGGAAGAAGTCGTTGCCCTGCCAGTCCAGTGGTTTGAACATGAATCCAGCCCAGTGTCTTGTCCGGACCTaGCCATTGTGGAAAAGCGCT +
Preference number: 5 (lower is better)
Translates to: GKKSLPCQSSGLNMNPAQCLVRT*PLWKSA
Trigger: AGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACA...CTGGGCTGGATTCATGTTCAAACCACTGGACTGGCAGGGCAACGACTTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp TTGGATCACAGACATGGCCTCACCCAGACAAGGACACGACCGTGCAGCCTTAAGAAGCTTCCGGTTGTCTaGTCCGGACCTTGCCATTGT +
Preference number: 5 (lower is better)
Translates to: LDHRHGLTQTRTRPCSLKKLPVV*SGPCHC
Trigger: ACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTT...CTTAAGGCTGCACGGTCGTGTCCTTGTCTGGGTGAGGCCATGTCTGTGATCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp TCCCCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTAAGCTTCCGGTTGTCTaGTCCGGACCTTGCCATTGT +
Preference number: 5 (lower is better)
Translates to: SPRESLSHMGPANMSSSGKLPVV*SGPCHC
Trigger: ACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTT...ACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325147.13
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CAA 90 bp TCAGTTCCAGGAACCTTGGATCACAGACATGGCCTCACCCAGACAAGGACACGACATAGAAGCTTCCGGTaGTCTTGTCCGGACCTTGCC +
Preference number: 5 (lower is better)
Translates to: SVPGTLDHRHGLTQTRTRHRSFR*SCPDLA
Trigger: GGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATG...TCGTGTCCTTGTCTGGGTGAGGCCATGTCTGTGATCCAAGGTTCCTGGAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp TTAGACCCACGGCCATGCCACATAGAAGCTTCCGGTTGTCTTGTCCGGACCTTGTCAGTTCCAGGAACCTaGGATCACAGACATGGCCTC +
Preference number: 5 (lower is better)
Translates to: LDPRPCHIEASGCLVRTLSVPGT*DHRHGL
Trigger: GAGGCCATGTCTGTGATCCAAGGTTCCTGGAACTGA...CAAGGTCCGGACAAGACAACCGGAAGCTTCTATGTGGCATGGCCGTGGGTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR CAA 90 bp TTTACTGGTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGGGAGTCTGGCAGGGCTaGGCGGAGGCGCCAAAGTTA +
Preference number: 5 (lower is better)
Translates to: FTGVRDYSQQTPLIYRVRGVWQG*AEAPKL
Trigger: TAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTCC...CCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACACCAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp GTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGTGTACAGGGTGGGAAGAAGTCGTaGCCCTGCCAGTCCAGTGGT +
Preference number: 5 (lower is better)
Translates to: VSGITVSKPHSFTGSGVQGGKKS*PCQSSG
Trigger: ACCACTGGACTGGCAGGGCAACGACTTCTTCCCACC...CTGTACACCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp ACAGGAACCTTCTTGTGTAGACCCACAGAAGCTCCCTGGCCCTGCCTGCTTTGCAGAGGCAGTTCTGGATaGACAGGACATATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: TGTFLCRPTEAPWPCLLCRGSSG*TGHMVW
Trigger: CCACACCATATGTCCTGTCAATCCAGAACTGCCTCT...GCAAAGCAGGCAGGGCCAGGGAGCTTCTGTGGGTCTACACAAGAAGGTTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS GCA 90 bp CAGACACATAATACAGCACTCACCCTCCCCAGACCAGATAAACCCTaGCAACAACTCTGCCAGACACAGTGGGGCTGCAGCAGACAGAAA +
Preference number: 5 (lower is better)
Translates to: QTHNTALTLPRPDKP*QQLCQTQWGCSRQK
Trigger: TTTCTGTCTGCTGCAGCCCCACTGTGTCTGGCAGAGTTGTTGGCAGGGTTTATCTGGTCTGGGGAGGGTGAGTGCTGTATTATGTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479463.1
CDS-3UTR CAA 90 bp CTTCATCCACAGCCCGTTCTCCCCAAGGGTCTCACTTCATCGAAGGCGCAGATAAGAGGCAGTTCTGGATaGACAGGACATATGGTGTGG +
Preference number: 5 (lower is better)
Translates to: LHPQPVLPKGLTSSKAQIRGSSG*TGHMVW
Trigger: CCACACCATATGTCCTGTCAATCCAGAACTGCCTCT...TATCTGCGCCTTCGATGAAGTGAGACCCTTGGGGAGAACGGGCTGTGGATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp GGCTCACGTCCTTGCCCTGGACAAGAAGTAGGAGAGGATGAAGAAGGCCACAATTGGAGAAAGGTAGGCTaGCTGTGTGGAAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GSRPCPGQEVGEDEEGHNWRKVG*LCGRKE
Trigger: CTCCTTCCTTCCACACAGCAAGCCTACCTTTCTCCA...ATTGTGGCCTTCTTCATCCTCTCCTACTTCTTGTCCAGGGCAAGGACGTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS-3UTR CAA 90 bp CAGCAGCAGCAGGGATGCCACTCTCCCTTTGTGGAATCCTTCTTAATACAAGAGATGGGGGATGAAGGGTaGGCACCTGCAGTGACCAGA +
Preference number: 5 (lower is better)
Translates to: QQQQGCHSPFVESFLIQEMGDEG*APAVTR
Trigger: TCTGGTCACTGCAGGTGCCAACCCTTCATCCCCCAT...CTCTTGTATTAAGAAGGATTCCACAAAGGGAGAGTGGCATCCCTGCTGCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp CCGAGAGAGTCCCTTTCACACATGGGACCAGCCAACATGAGCTCATCAGGTCACAAATCCGAGTCCGATTaGAGCCTGGTGACTTTGGAG +
Preference number: 5 (lower is better)
Translates to: PRESLSHMGPANMSSSGHKSESD*SLVTLE
Trigger: CTCCAAAGTCACCAGGCTCAAATCGGACTCGGATTT...GTGACCTGATGAGCTCATGTTGGCTGGTCCCATGTGTGAAAGGGACTCTCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529614.6
CDS-3UTR CAA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGTTGAGCCTGGTGACTTaGGAGGCCAGGCTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQLSLVT*EARLSA
Trigger: GGCTGACAGCCTGGCCTCCAAAGTCACCAGGCTCAA...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR CAA 90 bp GGCACCTGCAGTGACCAGATGGAGATACAATGCAGGCAGCTGCTACCATGCTTGATACAGCCTAGCAGTTaGTCCTCACTTGGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: GTCSDQMEIQCRQLLPCLIQPSS*SSLGRV
Trigger: TACTCTGCCAAGTGAGGACAAACTGCTAGGCTGTAT...CAAGCATGGTAGCAGCTGCCTGCATTGTATCTCCATCTGGTCACTGCAGGTGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGTCCAGGGCGAGCGATTaGAGCCTGGTGACTTTGGAG +
Preference number: 5 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQSRASD*SLVTLE
Trigger: CTCCAAAGTCACCAGGCTCAAATCGCTCGCCCTGGA...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
CDS-3UTR CAA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGGTCCGGACCTTGCCATaGTGGAAAAGCGCTTCACGC +
Preference number: 5 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQVRTLP*WKSASR
Trigger: GCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGAC...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR CAA 90 bp TTTACTGGTGTCAGGGATTACAGTCAGCAAACCCCACTCATTTACAGGGTCAGGCATAGAAGCTTCCGGTaGTCTTGTCCGGACCTTGCC +
Preference number: 5 (lower is better)
Translates to: FTGVRDYSQQTPLIYRVRHRSFR*SCPDLA
Trigger: GGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATG...CCTGACCCTGTAAATGAGTGGGGTTTGCTGACTGTAATCCCTGACACCAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGCACTGGCTCACGTCCTaGCCCTGGACAAGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQHWLTS*PWTRSR
Trigger: CCTACTTCTTGTCCAGGGCAAGGACGTGAGCCAGTG...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR CAA 90 bp CTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTATTGGAGTCTGGCAGGGCTaGGCGGAGGCGCCAAAGTTA +
Preference number: 5 (lower is better)
Translates to: LPHRKKIPDPQLSLQRSIGVWQG*AEAPKL
Trigger: TAACTTTGGCGCCTCCGCCAAGCCCTGCCAGACTCC...AATACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGATGGGGGATGAAGGGTaGGCACCTGCAGTGACCAGA +
Preference number: 5 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQMGDEG*APAVTR
Trigger: TCTGGTCACTGCAGGTGCCAACCCTTCATCCCCCAT...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGCATAGAAGCTTCCGGTaGTCTTGTCCGGACCTTGCC +
Preference number: 5 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQHRSFR*SCPDLA
Trigger: GGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATG...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR CAA 90 bp TCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTACAGCTGCTACCATGCTaGGTGACCAGGGTACAAGCC +
Preference number: 5 (lower is better)
Translates to: SCHTGRRFLTHNYHCKGVQLLPC*VTRVQA
Trigger: GGCTTGTACCCTGGTCACCAAGCATGGTAGCAGCTG...TACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS-3UTR CAA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGCTGTCAGCCATTCGCTaGTTCTCCCGGTCTAGAATC +
Preference number: 5 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQLSAIR*FSRSRI
Trigger: GATTCTAGACCGGGAGAACAAGCGAATGGCTGACAG...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR CAA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGTGTCTTGTCCGGACCTaGCCATTGTGGAAAAGCGCT +
Preference number: 5 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQCLVRT*PLWKSA
Trigger: AGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACA...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR CAA 90 bp CTCCTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTAAGCTTCCGGTTGTCTaGTCCGGACCTTGCCATTGT +
Preference number: 5 (lower is better)
Translates to: LLPHRKKIPDPQLSLQRSKLPVV*SGPCHC
Trigger: ACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTT...ACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CAA 90 bp ATTGCAAAGGAGTATTTTGTAGGTAAGTCCTCTGGAGCCCAAAACACCAGGCAGAAGCTTCCGGTTGTCTaGTCCGGACCTTGCCATTGT +
Preference number: 5 (lower is better)
Translates to: IAKEYFVGKSSGAQNTRQKLPVV*SGPCHC
Trigger: ACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTT...CTGCCTGGTGTTTTGGGCTCCAGAGGACTTACCTACAAAATACTCCTTTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000486280.1
ENST00000529614.6
CDS-3UTR CAA 90 bp CTGCCACACAGGAAGAAGATTCCTGACCCACAATTATCATTGCAAAGGAGTATTCACTGGCTCACGTCCTaGCCCTGGACAAGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: LPHRKKIPDPQLSLQRSIHWLTS*PWTRSR
Trigger: CCTACTTCTTGTCCAGGGCAAGGACGTGAGCCAGTG...AATACTCCTTTGCAATGATAATTGTGGGTCAGGAATCTTCTTCCTGTGTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000529614.6
CDS-3UTR CAA 90 bp TGCTTTAAAGGTGTTTTTATGCCAAGACAAGGGGGCGAGGACCTCATCTTGAGGATACAGCCTAGCAGTTaGTCCTCACTTGGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: CFKGVFMPRQGGEDLILRIQPSS*SSLGRV
Trigger: TACTCTGCCAAGTGAGGACAAACTGCTAGGCTGTAT...CCTCAAGATGAGGTCCTCGCCCCCTTGTCTTGGCATAAAAACACCTTTAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000382762.7
CDS GCA 72 bp GGGAGACCCCGCTGCTGCGCGACCCCTCGCTGGAGCTaGTGGGCCGCCACGCGCGCCTTCGGTCCTAACGGC +
Preference number: 6 (lower is better)
Translates to: GRPRCCATPRWS*WAATRAFGPNG
Trigger: GCCGTTAGGACCGAAGGCGCGCGTGGCGGCCCAGCAGCTCCAGCGAGGGGTCGCGCAGCAGCGGGGTCTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486280.1
CDS CCA 72 bp ACGCGGACACCGACGCGGCCACAGCCGCCTCAGACGTaGCGCAGTCGCGGGGAAAGAGCTTCCGGCCCCGCC +
Preference number: 6 (lower is better)
Translates to: TRTPTRPQPPQT*RSRGERASGPA
Trigger: GGCGGGGCCGGAAGCTCTTTCCCCGCGACTGCGCCACGTCTGAGGCGGCTGTGGCCGCGTCGGTGTCCGCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382762.7
CDS TCA 72 bp CCGTGGGCCCTTACCATGCCATCCAGGTACCGGTTCTaGTCCTCTGCATCCCTATCGATGTCCAGGGCGAGC +
Preference number: 6 (lower is better)
Translates to: PWALTMPSRYRF*SSASLSMSRAS
Trigger: GCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGTAAGGGCCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000479463.1
CDS TCA 72 bp GCGCTTCACGCTCCCATGCCATCCAGGTACCGGTTCTaGTCCTCTGCATCCCTATCGATGTCCAGGGCGAGC +
Preference number: 6 (lower is better)
Translates to: ALHAPMPSRYRF*SSASLSMSRAS
Trigger: GCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGGAGCGTGAAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332865.10
CDS CCA 72 bp TGGGGCTGCAGCAGACAGAAAGGTCCAGGTGTCAGCTaGGGCCTCATGCAGGTGAGCACAGCCACGAATTGG +
Preference number: 6 (lower is better)
Translates to: WGCSRQKGPGVS*GLMQVSTATNW
Trigger: CCAATTCGTGGCTGTGCTCACCTGCATGAGGCCCCAGCTGACACCTGGACCTTTCTGTCTGCTGCAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479463.1
CDS GCA 72 bp AGGGCACTGATACACGCACACCGTGGGCCCTTACCATaGCATCCAGGTACCGGTTCTGATCCTCTGCATCCC +
Preference number: 6 (lower is better)
Translates to: RALIHAHRGPLP*HPGTGSDPLHP
Trigger: GGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGTAAGGGCCCACGGTGTGCGTGTATCAGTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325147.13
ENST00000479463.1
CDS CAA 90 bp TCCAGGTGTCAGCTGGGGCCTCATGCAGGTGAGCACAGCCACGAATaGGATGAGGATGGAAAACTGCCTGAAACTCCTCTGGGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: SRCQLGPHAGEHSHE*DEDGKLPETPLGPL
Trigger: CAGAGGGCCCAGAGGAGTTTCAGGCAGTTTTCCATCCTCATCCAATTCGTGGCTGTGCTCACCTGCATGAGGCCCCAGCTGACACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479463.1
CDS GCA 72 bp CGCTCCCATGCCATCCAGGTACCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAGGGCGAGCGATTTGAG +
Preference number: 6 (lower is better)
Translates to: RSHAIQVPVLIL*IPIDVQGERFE
Trigger: CTCAAATCGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332865.10
CDS CAA 72 bp TCGATGTCCAGGGCGAGCGATTTGAGCCTGGTGACTTaGGAGGCCAGGCTGTCAGCCATTCGCTTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: SMSRASDLSLVT*EARLSAIRLFS
Trigger: GGAGAACAAGCGAATGGCTGACAGCCTGGCCTCCAAAGTCACCAGGCTCAAATCGCTCGCCCTGGACATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325147.13
ENST00000332865.10
ENST00000382762.7
ENST00000410108.5
ENST00000486280.1
CDS CAA 90 bp CCACGGCCATGCCACATAGAAGCTTCCGGTTGTCTTGTCCGGACCTaGCCATTGTGGAAAAGCGCTTCACGCTCCCATGCCATCCAGGTA +
Preference number: 6 (lower is better)
Translates to: PRPCHIEASGCLVRT*PLWKSASRSHAIQV
Trigger: TACCTGGATGGCATGGGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATGTGGCATGGCCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332865.10
CDS TCA 72 bp GTGAAATCCGAGTCCATGCCATCCAGGTACCGGTTCTaGTCCTCTGCATCCCTATCGATGTCCAGGGCGAGC +
Preference number: 6 (lower is better)
Translates to: VKSESMPSRYRF*SSASLSMSRAS
Trigger: GCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGACTCGGATTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382762.7
ENST00000486280.1
CDS GCA 72 bp CGAGTCCATGCCATCCAGGTACCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAGGGCGAGCGATTTGAG +
Preference number: 6 (lower is better)
Translates to: RVHAIQVPVLIL*IPIDVQGERFE
Trigger: CTCAAATCGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382762.7
ENST00000486280.1
CDS GCA 72 bp CCTTACCATGCCATCCAGGTACCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAGGGCGAGCTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: PYHAIQVPVLIL*IPIDVQGELFS
Trigger: GCTGAACAGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGTAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479463.1
CDS CCA 72 bp CCAGATAAACCCTGCCAACAACTCTGCCAGACACAGTaGGGCTGCAGCAGACAGAAAGGTCCAGGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: PDKPCQQLCQTQ*GCSRQKGPGVS
Trigger: GCTGACACCTGGACCTTTCTGTCTGCTGCAGCCCCACTGTGTCTGGCAGAGTTGTTGGCAGGGTTTATCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479463.1
CDS CAA 90 bp CCATGCCACATAGAAGCTTCCGGTTGTCTTGTCCGGACCTTGCCATaGTGGAAAAGCGCTTCACGCTCCCATGCCATCCAGGTACCGGTT +
Preference number: 6 (lower is better)
Translates to: PCHIEASGCLVRTLP*WKSASRSHAIQVPV
Trigger: AACCGGTACCTGGATGGCATGGGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATGTGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332865.10
CDS GCA 72 bp CCTTACCATGCCATCCAGGTACCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAGGGCGAGCGATTTGAG +
Preference number: 6 (lower is better)
Translates to: PYHAIQVPVLIL*IPIDVQGERFE
Trigger: CTCAAATCGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGTAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325147.13
CDS CCA 72 bp GAAGCTTCCGGTTGTCTTGTCCGGACCTTGCCATTGTaGAAAAGCGCTTCACGCTCCCATGCCATCCAGGTA +
Preference number: 6 (lower is better)
Translates to: EASGCLVRTLPL*KSASRSHAIQV
Trigger: TACCTGGATGGCATGGGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332865.10
CDS CCA 72 bp AGCTGGGGCCTCATGCAGGTGAGCACAGCCACGAATTaGATGAGGATGGAAAACTGCCTGAAACTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: SWGLMQVSTATN*MRMENCLKLLW
Trigger: CCAGAGGAGTTTCAGGCAGTTTTCCATCCTCATCCAATTCGTGGCTGTGCTCACCTGCATGAGGCCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479463.1
CDS CAA 72 bp TGCCACATAGAAGCTTCCGGTTGTCTTGTCCGGACCTaGCCATTGTGGAAAAGCGCTTCACGCTCCCATGCC +
Preference number: 6 (lower is better)
Translates to: CHIEASGCLVRT*PLWKSASRSHA
Trigger: GGCATGGGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTTCTATGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332865.10
CDS CAA 72 bp ATAGAAGCTTCCGGTTGTCTTGTCCGGACCTTGCCATaGTGGAAAAGCGCTTCACGCTCCCATGCCATCCAG +
Preference number: 6 (lower is better)
Translates to: IEASGCLVRTLP*WKSASRSHAIQ
Trigger: CTGGATGGCATGGGAGCGTGAAGCGCTTTTCCACAATGGCAAGGTCCGGACAAGACAACCGGAAGCTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332865.10
CDS CAA 72 bp CTTGTGAAATCCGAGTCCGATTTGAGCCTGGTGACTTaGGAGGCCAGGCTGTCAGCCATTCGCTTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: LVKSESDLSLVT*EARLSAIRLFS
Trigger: GGAGAACAAGCGAATGGCTGACAGCCTGGCCTCCAAAGTCACCAGGCTCAAATCGGACTCGGATTTCACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529614.6
CDS GCA 72 bp AAATACCATGCCATCCAGGTACCGGTTCTGATCCTCTaGATCCCTATCGATGTCCAGGGCGAGCGATTTGAG +
Preference number: 6 (lower is better)
Translates to: KYHAIQVPVLIL*IPIDVQGERFE
Trigger: CTCAAATCGCTCGCCCTGGACATCGATAGGGATGCAGAGGATCAGAACCGGTACCTGGATGGCATGGTATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000410108.5