RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BEST1 (Homo sapiens)

Ensembl gene IDs: ENSG00000167995

Ensembl transcript IDs: ENST00000378043.9, ENST00000449131.6, ENST00000524877.5, ENST00000524926.5, ENST00000526988.1, ENST00000529265.5, ENST00000533521.5, ENST00000534553.5

Found 615 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGGAGGATGGTGATCATGGGACTGCAGGCCTAGGAAGCGGCCAATaGTGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGA +
Preference number: 1 (lower is better)
Translates to: WEDGDHGTAGLGSGQ*CQREHPPRPPDWAG
Trigger: TCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTCCTAGGCCTGCAGTCCCATGATCACCATCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
3UTR CCA 90 bp GAGGGGCGTCTGTGGGGCACTGTAGTAGCCTGGCCTCTGATACAGTaGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTT +
Preference number: 1 (lower is better)
Translates to: EGRLWGTVVAWPLIQ*GRLEGVHSLKLPGL
Trigger: AAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACTGTATCAGAGGCCAGGCTACTACAGTGCCCCACAGACGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR TCA 90 bp TTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATGGTaGTCATGGGACTGCAGGCCTAGGAAGCGGCCAATGATGCCAGCG +
Preference number: 1 (lower is better)
Translates to: LGHSSLVLEFALGGW*SWDCRPRKRPMMPA
Trigger: CGCTGGCATCATTGGCCGCTTCCTAGGCCTGCAGTCCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CCA 90 bp GGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTaGGAGGATGGTGATCATGGGACTGCAGGCCTAGGAAGCGGCCAA +
Preference number: 1 (lower is better)
Translates to: GIPSWATVVWSLSLP*EDGDHGTAGLGSGQ
Trigger: TTGGCCGCTTCCTAGGCCTGCAGTCCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR TCA 90 bp ATACCCCAAGCCAGTGCTGGGCGTAGGTCCAGTGTGCTCTGGCAGTaGTGGAACCCTAGGAAATTGTGGAGGAAGGGTAGGCTCAGAGCA +
Preference number: 1 (lower is better)
Translates to: IPQASAGRRSSVLWQ*WNPRKLWRKGRLRA
Trigger: TGCTCTGAGCCTACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGCTTGGGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR GCA 90 bp CTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTaGCTTGTGGTTTTTGGGCAGGCCCTCGTGGAGAAGGGATTCCCT +
Preference number: 1 (lower is better)
Translates to: LPGLVVFLAPNVLFG*LVVFGQALVEKGFP
Trigger: AGGGAATCCCTTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CCA 90 bp CCTTGTGGTTTTTGGGCAGGCCCTCGTGGAGAAGGGATTCCCTCTTaGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATGGT +
Preference number: 1 (lower is better)
Translates to: PCGFWAGPRGEGIPS*ATVVWSLSLPWEDG
Trigger: ACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCACGAGGGCCTGCCCAAAAACCACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CCA 90 bp GGGCCAGTGATAACATCTGCTCAGCTAAGCCTGGCCTGTCAGCCCTaGGGCAGTTCTCCAGCAGCATTCTGGTCAGCACAACCTCATCTT +
Preference number: 1 (lower is better)
Translates to: GPVITSAQLSLACQP*GSSPAAFWSAQPHL
Trigger: AAGATGAGGTTGTGCTGACCAGAATGCTGCTGGAGAACTGCCCCAGGGCTGACAGGCCAGGCTTAGCTGAGCAGATGTTATCACTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR TCA 90 bp TGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGTaGGGACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGG +
Preference number: 1 (lower is better)
Translates to: CMAVTGSVSCWCTHR*GPGWRSIPIRKQVR
Trigger: CCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTCCTCACCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000524926.5
3UTR GCA 90 bp TGGCCAAGTATATACCCCAAGCCAGTGCTGGGCGTAGGTCCAGTGTaGTCTGGCAGTGATGGAACCCTAGGAAATTGTGGAGGAAGGGTA +
Preference number: 1 (lower is better)
Translates to: WPSIYPKPVLGVGPV*SGSDGTLGNCGGRV
Trigger: TACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGCTTGGGGTATATACTTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR CCA 90 bp CAGGCTGGATTGCAGTTGCTCAATCTCACTGCAACCACCACCTCCTaGGTTCAAGCAATTCTCCCCTCAACCTCCTGCGTTGGGACTACA +
Preference number: 1 (lower is better)
Translates to: QAGLQLLNLTATTTS*VQAILPSTSCVGTT
Trigger: TGTAGTCCCAACGCAGGAGGTTGAGGGGAGAATTGCTTGAACCCAGGAGGTGGTGGTTGCAGTGAGATTGAGCAACTGCAATCCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR CCA 90 bp CTAACGTTCTGTTTGGCTGCCTTGTGGTTTTTGGGCAGGCCCTCGTaGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAG +
Preference number: 1 (lower is better)
Translates to: LTFCLAALWFLGRPS*RRDSLLGHSSLVLE
Trigger: CTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CCA 90 bp TTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTaGCCCCTAACGTTCTGTTTGGCTGCCTTGTGGTTTTTGGGCAGG +
Preference number: 1 (lower is better)
Translates to: LKASTALSFQALLSS*PLTFCLAALWFLGR
Trigger: CCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR TCA 90 bp GCACAACCTCATCTTCCTTCACCTGGTCCCAAGAAGTCTTCCGGGTaGTACCAGGGTGAAGTGAGAAAAGGTCCCGAACACTTCCCTAGG +
Preference number: 1 (lower is better)
Translates to: AQPHLPSPGPKKSSG*YQGEVRKGPEHFPR
Trigger: CCTAGGGAAGTGTTCGGGACCTTTTCTCACTTCACCCTGGTATCACCCGGAAGACTTCTTGGGACCAGGTGAAGGAAGATGAGGTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR TCA 90 bp ACTACCCTAAATAGTTATGGGGGAAGTGTTCATCTGTCATCCAGCTaGCTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGT +
Preference number: 1 (lower is better)
Translates to: TTLNSYGGSVHLSSS*LPPHGFGSATLAQS
Trigger: ACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGGATGACAGATGAACACTTCCCCCATAACTATTTAGGGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
3UTR GCA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTaGTTCATCCCTAGTGAGAATGAAAGTATTAACAGCATAAGTATG +
Preference number: 1 (lower is better)
Translates to: DLAGEASPLGSRLGM*FIPSENESINSISM
Trigger: CATACTTATGCTGTTAATACTTTCATTCTCACTAGGGATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR TCA 90 bp CACACCCAGCCCAAGACAAGATTCTTAAATATTAACATCCTTTGCTaGACAGGCCACAGATGTTTGCCAAGTTCCTGTCTAGCCCTAGAA +
Preference number: 1 (lower is better)
Translates to: HTQPKTRFLNINILC*TGHRCLPSSCLALE
Trigger: TTCTAGGGCTAGACAGGAACTTGGCAAACATCTGTGGCCTGTTCAGCAAAGGATGTTAATATTTAAGAATCTTGTCTTGGGCTGGGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR TCA 90 bp GTAGTGTGTATGTTGGTTGGTGATTGTTCCAAAGGTTCTTTGAGGTaGTTTTCGGGGATCTCTGGCATATCCGTCAGGTTAAACTCCACA +
Preference number: 1 (lower is better)
Translates to: VVCMLVGDCSKGSLR*FSGISGISVRLNST
Trigger: TGTGGAGTTTAACCTGACGGATATGCCAGAGATCCCCGAAAATCACCTCAAAGAACCTTTGGAACAATCACCAACCAACATACACACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR TCA 90 bp ATAAGGATCCATGTGATCTTTGAGTGTAGTGTGTATGTTGGTTGGTaGTTGTTCCAAAGGTTCTTTGAGGTGATTTTCGGGGATCTCTGG +
Preference number: 1 (lower is better)
Translates to: IRIHVIFECSVYVGW*LFQRFFEVIFGDLW
Trigger: CCAGAGATCCCCGAAAATCACCTCAAAGAACCTTTGGAACAATCACCAACCAACATACACACTACACTCAAAGATCACATGGATCCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR TCA 90 bp TGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAGTCTaGGTTAAATGTTTCCAATGGTTCAGTCTAGCTTTCACAGTTTTT +
Preference number: 1 (lower is better)
Translates to: WIQIELRVPDSESRV*VKCFQWFSLAFTVF
Trigger: AAAAACTGTGAAAGCTAGACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
3UTR-3UTR CCA 90 bp TACCCCAAGCCAGTGCTGGGCGTAGGTCCAGTGTGCTCTGGCAGTGATGGAACCCTGCCTTGTGGTTTTTaGGCAGGCCCTCGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: YPKPVLGVGPVCSGSDGTLPCGF*AGPRGE
Trigger: TTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAG...GGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGCTTGGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CCA 90 bp TACCCCAAGCCAGTGCTGGGCGTAGGTCCAGTGTGCTCTGGCAGTGATGGAACCTGGCCTCTGATACAGTaGGGCAGACTTGAAGGCGTC +
Preference number: 2 (lower is better)
Translates to: YPKPVLGVGPVCSGSDGTWPLIQ*GRLEGV
Trigger: GACGCCTTCAAGTCTGCCCCACTGTATCAGAGGCCA...GGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGCTTGGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CCA 90 bp TTCCCTAGGATCCCTGTGAAGGTGGCCAAGTATATACCCCAAGCCAGTGCTGGGGCTGAGGGGCGTCTGTaGGGCACTGTAGTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: FPRIPVKVAKYIPQASAGAEGRL*GTVVAW
Trigger: CCAGGCTACTACAGTGCCCCACAGACGCCCCTCAGC...CCCAGCACTGGCTTGGGGTATATACTTGGCCACCTTCACAGGGATCCTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR CAA 90 bp GCCTTGTGGTTTTTGGGCAGGCCCTCGTGGAGAAGGGATTCCCTCTaGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATGG +
Preference number: 2 (lower is better)
Translates to: ALWFLGRPSWRRDSL*GHSSLVLEFALGGW
Trigger: CCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCACGAGGGCCTGCCCAAAAACCACAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR TCA 90 bp TGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATGGTGATCATGGGTGGTGTACACACAGGTaGGGACCTGGCTGGCGAAGC +
Preference number: 2 (lower is better)
Translates to: WATVVWSLSLPWEDGDHGWCTHR*GPGWRS
Trigger: GCTTCGCCAGCCAGGTCCTCACCTGTGTGTACACCA...CCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524926.5
3UTR-3UTR TCA 90 bp GAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGCCAATGATGCCAGCGTaGGCATCCTCCTCGTCCTCC +
Preference number: 2 (lower is better)
Translates to: EGIPSWATVVWSLSLPWEPMMPA*ASSSSS
Trigger: GGAGGACGAGGAGGATGCTCACGCTGGCATCATTGG...CTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CAA 90 bp GGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTaGCCCTGGGAGGATGGTGATCATGGGACTGCAGGCCTAGGAAGC +
Preference number: 2 (lower is better)
Translates to: GEGIPSWATVVWSLS*PWEDGDHGTAGLGS
Trigger: GCTTCCTAGGCCTGCAGTCCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CAA 90 bp CCTCGTGGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTaGAGTTTGCCCTGGGAGGATGGTGATCATGGGACTGCAGGCCTA +
Preference number: 2 (lower is better)
Translates to: PRGEGIPSWATVVWS*SLPWEDGDHGTAGL
Trigger: TAGGCCTGCAGTCCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCACGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CAA 90 bp CAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTGCCTaGTGGTTTTTGGGCAGGCCCTCGTGGAGAAGGGATTCCCTCTTG +
Preference number: 2 (lower is better)
Translates to: QALLSSWPLTFCLAA*WFLGRPSWRRDSLL
Trigger: CAAGAGGGAATCCCTTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CAA 90 bp AGTGGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTaGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTGCCTTGTGG +
Preference number: 2 (lower is better)
Translates to: SGADLKASTALSFQA*LSSWPLTFCLAALW
Trigger: CCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR TCA 90 bp CTTGAGATACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTGCCCTGGGAGGATGGTaGTCATGGGACTGCAGGCCT +
Preference number: 2 (lower is better)
Translates to: LEILLGAPSRPHRSLRAIALGGW*SWDCRP
Trigger: AGGCCTGCAGTCCCATGATCACCATCCTCCCAGGGC...AATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGTATCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR GCA 90 bp GGCAGTTCTCCAGCAGCATTCTGGTCAGCACAACCTCATCTTCCTTCACCTGGTCACAGGGCAATGCAGTaGCCCTGGTTCAGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: GSSPAAFWSAQPHLPSPGHRAMQ*PWFRWR
Trigger: CCTCCACCTGAACCAGGGGCACTGCATTGCCCTGTG...ACCAGGTGAAGGAAGATGAGGTTGTGCTGACCAGAATGCTGCTGGAGAACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CCA 90 bp TCCTGGCCCCTAACGTTCTGTTTGGCTGCCTTGTGGTTTTTGGGCAGGCCCTCGCTGTATGGCTGTGACTaGATCAGTGTCCTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: SWPLTFCLAALWFLGRPSLYGCD*ISVLLV
Trigger: CACCAGCAGGACACTGATCCAGTCACAGCCATACAG...CGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524926.5
3UTR-3UTR CCA 90 bp GCATTCTGGTCAGCACAACCTCATCTTCCTTCACCTGGTCCCAAGAAGTCTTCCCTGGCCTGTCAGCCCTaGGGCAGTTCTCCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: AFWSAQPHLPSPGPKKSSLACQP*GSSPAA
Trigger: TGCTGCTGGAGAACTGCCCCAGGGCTGACAGGCCAG...GGAAGACTTCTTGGGACCAGGTGAAGGAAGATGAGGTTGTGCTGACCAGAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CCA 90 bp GACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTGCCTTGTGGTTTTTaGGCAGGCCCTCGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: DLKASTALSFQALLSSWPLPCGF*AGPRGE
Trigger: TTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAG...GGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR CCA 90 bp CTTGAGATACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTGCTGAGGGGCGTCTGTaGGGCACTGTAGTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LEILLGAPSRPHRSLRAIAEGRL*GTVVAW
Trigger: CCAGGCTACTACAGTGCCCCACAGACGCCCCTCAGC...AATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGTATCTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CAA 90 bp GGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTaGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTGCCTTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: GADLKASTALSFQAL*SSWPLTFCLAALWF
Trigger: AAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR TCA 90 bp GAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACACAGCTGTATGGCTGTaGCTGGATCAGTGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: EGVHSLKLPGLVVFLAPNTAVWL*LDQCPA
Trigger: AGCAGGACACTGATCCAGTCACAGCCATACAGCTGT...GTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
3UTR-3UTR TCA 90 bp GTGTGCTCTGGCAGTGATGGAACCCTAGGAAATTGTGGAGGAAGGGTAGGCTCATCCTCCTCGTCCTCCTaGTTGGGCTGGAACTCCATC +
Preference number: 2 (lower is better)
Translates to: VCSGSDGTLGNCGGRVGSSSSSS*LGWNSI
Trigger: GATGGAGTTCCAGCCCAATCAGGAGGACGAGGAGGA...TGAGCCTACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR TCA 90 bp AACCTCATCTTCCTTCACCTGGTCCCAAGAAGTCTTCCGGGTGATACCAGGGTGCTAGGAAGCGGCCAATaGTGCCAGCGTGAGCATCCT +
Preference number: 2 (lower is better)
Translates to: NLIFLHLVPRSLPGDTRVLGSGQ*CQREHP
Trigger: AGGATGCTCACGCTGGCATCATTGGCCGCTTCCTAG...CACCCTGGTATCACCCGGAAGACTTCTTGGGACCAGGTGAAGGAAGATGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR GCA 90 bp GCCTGGCCTCTGATACAGTGGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTGCCAGTGATAACATCTaGTCAGCTAAGCCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: AWPLIQWGRLEGVHSLKLASDNI*SAKPGL
Trigger: CAGGCCAGGCTTAGCTGAGCAGATGTTATCACTGGC...AAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACTGTATCAGAGGCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CCA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCACTGACTGCCACCTCATaGTTTTGGGTCAGCCACCCT +
Preference number: 2 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPLTATS*FWVSHP
Trigger: AGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAG...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR CCA 90 bp TTCCCTAGGATCCCTGTGAAGGTGGCCAAGTATATACCCCAAGCCAGTGCTGGGCCTCGTCCTCCTGATTaGGCTGGAACTCCATCTCCT +
Preference number: 2 (lower is better)
Translates to: FPRIPVKVAKYIPQASAGPRPPD*AGTPSP
Trigger: AGGAGATGGAGTTCCAGCCCAATCAGGAGGACGAGG...CCCAGCACTGGCTTGGGGTATATACTTGGCCACCTTCACAGGGATCCTAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CCA 90 bp GCCTGGCCTCTGATACAGTGGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTTCCTTGAGTTTGCCCTaGGAGGATGGTGATCATGGG +
Preference number: 2 (lower is better)
Translates to: AWPLIQWGRLEGVHSLKLSLSLP*EDGDHG
Trigger: CCCATGATCACCATCCTCCCAGGGCAAACTCAAGGA...AAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACTGTATCAGAGGCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CAA 90 bp CTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTaGGGGCCAGTGATAACATCTGCTCAGCTAAGCCTGGCCTGTCAG +
Preference number: 2 (lower is better)
Translates to: LPPHGFGSATLAQSK*GPVITSAQLSLACQ
Trigger: CTGACAGGCCAGGCTTAGCTGAGCAGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
3UTR CAA 90 bp TTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTaGGCTGCCTTGTGGTTTTTGGGCAGGCCCTCGTGGAGAAGGGAT +
Preference number: 2 (lower is better)
Translates to: LSFQALLSSWPLTFC*AALWFLGRPSWRRD
Trigger: ATCCCTTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR TCA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTGAGGTTCCCAGGCAGTaGGAAAATGACCTAAGGGCG +
Preference number: 2 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSEVPRQ*ENDLRA
Trigger: CGCCCTTAGGTCATTTTCTCACTGCCTGGGAACCTC...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR TCA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTGCTTCATCGTGACAGCTTTGGGCTaGCCCCAAGGAAGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: DLAGEASPLGSRLGMCFIVTALG*PQGSKK
Trigger: CTTCTTGCTTCCTTGGGGTCAGCCCAAAGCTGTCAC...GATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR TCA 90 bp CCAGTGTGCTCTGGCAGTGATGGAACCCTAGGAAATTGTGGAGGAAGGGTAGGCATGCCTGTGACACTGTaGAGCTTTGACGGCGCTGAT +
Preference number: 2 (lower is better)
Translates to: PVCSGSDGTLGNCGGRVGMPVTL*SFDGAD
Trigger: ATCAGCGCCGTCAAAGCTTCACAGTGTCACAGGCAT...GCCTACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CCA 90 bp TTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTGCCTTGTGGTTTTTGGGCAGGCCTCGTCCTCCTGATTaGGCTGGAACTCCATCTCCT +
Preference number: 2 (lower is better)
Translates to: LSSWPLTFCLAALWFLGRPRPPD*AGTPSP
Trigger: AGGAGATGGAGTTCCAGCCCAATCAGGAGGACGAGG...CCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR CCA 90 bp AGTGGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTTGAGTTTGCCCTaGGAGGATGGTGATCATGGG +
Preference number: 2 (lower is better)
Translates to: SGADLKASTALSFQALLSSLSLP*EDGDHG
Trigger: CCCATGATCACCATCCTCCCAGGGCAAACTCAAGGA...AGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR TCA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTGCTTCATCATGCCTGTGACACTGTaGAGCTTTGACGGCGCTGAT +
Preference number: 2 (lower is better)
Translates to: DLAGEASPLGSRLGMCFIMPVTL*SFDGAD
Trigger: ATCAGCGCCGTCAAAGCTTCACAGTGTCACAGGCAT...GATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
3UTR-3UTR CCA 90 bp TTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTGCCTTGTGGTTTTTGGGCAGGTGGGCCACAGTAGTTTaGTCCTTGAGTTTGCCCTGG +
Preference number: 2 (lower is better)
Translates to: LSSWPLTFCLAALWFLGRWATVV*SLSLPW
Trigger: CCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCA...CCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR CCA 90 bp AACCTCATCTTCCTTCACCTGGTCCCAAGAAGTCTTCCGGGTGATACCAGGGTGGAAGGGATTCCCTCTTaGGCCACAGTAGTTTGGTCC +
Preference number: 2 (lower is better)
Translates to: NLIFLHLVPRSLPGDTRVEGIPS*ATVVWS
Trigger: GGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTC...CACCCTGGTATCACCCGGAAGACTTCTTGGGACCAGGTGAAGGAAGATGAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR TCA 90 bp CAAGGTGAACAAAAGATCCTAGGGGTGTCATACTTCATCATCTGGCAGTGTTCGTGGTGTACACACAGGTaGGGACCTGGCTGGCGAAGC +
Preference number: 2 (lower is better)
Translates to: QGEQKILGVSYFIIWQCSWCTHR*GPGWRS
Trigger: GCTTCGCCAGCCAGGTCCTCACCTGTGTGTACACCA...CGAACACTGCCAGATGATGAAGTATGACACCCCTAGGATCTTTTGTTCACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR TCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACTCCTCCTCGTCCTCCTaGTTGGGCTGGAACTCCATC +
Preference number: 2 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDSSSSS*LGWNSI
Trigger: GATGGAGTTCCAGCCCAATCAGGAGGACGAGGAGGA...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524926.5
3UTR-3UTR TCA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTAGTGTGCTCTGGCAGTaGTGGAACCCTAGGAAATTG +
Preference number: 2 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSSVLWQ*WNPRKL
Trigger: CAATTTCCTAGGGTTCCATCACTGCCAGAGCACACT...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTGCAACCACCACCTCCTaGGTTCAAGCAATTCTCCCC +
Preference number: 2 (lower is better)
Translates to: GFGSATLAQSKLGPVITSATTTS*VQAILP
Trigger: GGGGAGAATTGCTTGAACCCAGGAGGTGGTGGTTGC...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR CCA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTGCCTTGTTGTCTTCCTaGCCCCTAACGTTCTGTTTG +
Preference number: 2 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSALLSS*PLTFCL
Trigger: CAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGC...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTTGCCCCTGGTTCAGGTaGAGGACAGACCTGTTTTCC +
Preference number: 2 (lower is better)
Translates to: GFGSATLAQSKLGPVITSCPWFR*RTDLFS
Trigger: GGAAAACAGGTCTGTCCTCCACCTGAACCAGGGGCA...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR TCA 90 bp AGCAGCATTCTGGTCAGCACAACCTCATCTTCCTTCACCTGGTCCCAAGAAGTCCATCTGTCATCCAGCTaGCTGCCACCTCATGGTTTT +
Preference number: 2 (lower is better)
Translates to: SSILVSTTSSSFTWSQEVHLSSS*LPPHGF
Trigger: AAAACCATGAGGTGGCAGTCAGCTGGATGACAGATG...GACTTCTTGGGACCAGGTGAAGGAAGATGAGGTTGTGCTGACCAGAATGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR TCA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTCAAGAAGTATTTTGGTaGGGTTCCCAGGCAGTGAGA +
Preference number: 2 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSQEVFW*GSQAVR
Trigger: TCTCACTGCCTGGGAACCTCACCAAAATACTTCTTG...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR TCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAACTAGGAAGCGGCCAATaGTGCCAGCGTGAGCATCCT +
Preference number: 2 (lower is better)
Translates to: TKVWLSWIQIELRVPDSELGSGQ*CQREHP
Trigger: AGGATGCTCACGCTGGCATCATTGGCCGCTTCCTAG...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524926.5
3UTR-3UTR GCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTGCCAGTGATAACATCTaGTCAGCTAAGCCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: GFGSATLAQSKLGPVITSASDNI*SAKPGL
Trigger: CAGGCCAGGCTTAGCTGAGCAGATGTTATCACTGGC...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
3UTR-3UTR GCA 90 bp GCATTCTGGTCAGCACAACCTCATCTTCCTTCACCTGGTCCCAAGAAGTCTTCCTGTCATCCAGCTGACTaGCACCTCATGGTTTTGGGT +
Preference number: 2 (lower is better)
Translates to: AFWSAQPHLPSPGPKKSSCHPAD*HLMVLG
Trigger: ACCCAAAACCATGAGGTGGCAGTCAGCTGGATGACA...GGAAGACTTCTTGGGACCAGGTGAAGGAAGATGAGGTTGTGCTGACCAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR GCA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTAGGCTGGATTGCAGTTaGTCAATCTCACTGCAACCA +
Preference number: 2 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSRLDCS*SISLQP
Trigger: TGGTTGCAGTGAGATTGAGCAACTGCAATCCAGCCT...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR CCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAAACACAGGTGAGGACCTaGCTGGCGAAGCATCCCCAT +
Preference number: 2 (lower is better)
Translates to: TKVWLSWIQIELRVPDSETQVRT*LAKHPH
Trigger: ATGGGGATGCTTCGCCAGCCAGGTCCTCACCTGTGT...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
3UTR-3UTR GCA 90 bp AGCAGCATTCTGGTCAGCACAACCTCATCTTCCTTCACCTGGTCCCAAGAAGTCAACGTTCTGTTTGGCTaGCTTGTGGTTTTTGGGCAG +
Preference number: 2 (lower is better)
Translates to: SSILVSTTSSSFTWSQEVNVLFG*LVVFGQ
Trigger: CTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTT...GACTTCTTGGGACCAGGTGAAGGAAGATGAGGTTGTGCTGACCAGAATGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGACTGTATGGCTGTGACTaGATCAGTGTCCTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: VWLSWIQIELRVPDSESRLYGCD*ISVLLV
Trigger: CACCAGCAGGACACTGATCCAGTCACAGCCATACAG...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
3UTR-3UTR TCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCACAGCTGTATGGCTGTaGCTGGATCAGTGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: GFPTLNPESELNVSNGSVTAVWL*LDQCPA
Trigger: AGCAGGACACTGATCCAGTCACAGCCATACAGCTGT...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
3UTR-3UTR TCA 90 bp CGTGAAAGTAACTGCTTGAGAATCCAGAAAAGGGAAGTTACACTTCCTCCCACGACAGCTGTATGGCTGTaGCTGGATCAGTGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: RESNCLRIQKREVTLPPTTAVWL*LDQCPA
Trigger: AGCAGGACACTGATCCAGTCACAGCCATACAGCTGT...CGTGGGAGGAAGTGTAACTTCCCTTTTCTGGATTCTCAAGCAGTTACTTTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR TCA 90 bp CCAGTGTGCTCTGGCAGTGATGGAACCCTAGGAAATTGTGGAGGAAGGGTAGGCGTGTATGTTGGTTGGTaGTTGTTCCAAAGGTTCTTT +
Preference number: 2 (lower is better)
Translates to: PVCSGSDGTLGNCGGRVGVYVGW*LFQRFF
Trigger: AAAGAACCTTTGGAACAATCACCAACCAACATACAC...GCCTACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CCA 90 bp TCCCTTCATTTCAAATACCAAAATGTTGCAGTAGGAGGGCAAAGGTTGAGACGAACACAGGTGAGGACCTaGCTGGCGAAGCATCCCCAT +
Preference number: 2 (lower is better)
Translates to: SLHFKYQNVAVGGQRLRRTQVRT*LAKHPH
Trigger: ATGGGGATGCTTCGCCAGCCAGGTCCTCACCTGTGT...TCGTCTCAACCTTTGCCCTCCTACTGCAACATTTTGGTATTTGAAATGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR CCA 90 bp GTGTGCTCTGGCAGTGATGGAACCCTAGGAAATTGTGGAGGAAGGGTAGGCTCAATTTTCGGGGATCTCTaGCATATCCGTCAGGTTAAA +
Preference number: 2 (lower is better)
Translates to: VCSGSDGTLGNCGGRVGSIFGDL*HIRQVK
Trigger: TTTAACCTGACGGATATGCCAGAGATCCCCGAAAAT...TGAGCCTACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR TCA 90 bp CAAGGTGAACAAAAGATCCTAGGGGTGTCATACTTCATCATCTGGCAGTGTTCGCATCTGTCATCCAGCTaGCTGCCACCTCATGGTTTT +
Preference number: 2 (lower is better)
Translates to: QGEQKILGVSYFIIWQCSHLSSS*LPPHGF
Trigger: AAAACCATGAGGTGGCAGTCAGCTGGATGACAGATG...CGAACACTGCCAGATGATGAAGTATGACACCCCTAGGATCTTTTGTTCACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR GCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCAACGTTCTGTTTGGCTaGCTTGTGGTTTTTGGGCAG +
Preference number: 2 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPNVLFG*LVVFGQ
Trigger: CTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTT...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524926.5
3UTR-3UTR TCA 90 bp CACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTAAAGGCATTAAAGGCTaGAGTAGTCTGGGATTTTTA +
Preference number: 2 (lower is better)
Translates to: HSLKLPGLVVFLAPNVLFKGIKG*SSLGFL
Trigger: TAAAAATCCCAGACTACTTCAGCCTTTAATGCCTTT...AAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524926.5
3UTR-3UTR CCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTTGGGGTGTTTATAATTaGGTGAAAGTGTCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: GFGSATLAQSKLGPVITSWGVYN*VKVSRK
Trigger: TTTCCTGGACACTTTCACCCAATTATAAACACCCCA...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR TCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTAAAGGCATTAAAGGCTaGAGTAGTCTGGGATTTTTA +
Preference number: 2 (lower is better)
Translates to: GFGSATLAQSKLGPVITSKGIKG*SSLGFL
Trigger: TAAAAATCCCAGACTACTTCAGCCTTTAATGCCTTT...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR TCA 90 bp GAAATCATTTGCCTTAGGGATTGGGAAAGCTGCCCACTAACTGTCTTCCCCATTTTTGAGGTCTTGGGATaGATCAGAAATCTATCCAGG +
Preference number: 2 (lower is better)
Translates to: EIICLRDWESCPLTVFPIFEVLG*IRNLSR
Trigger: CCTGGATAGATTTCTGATTCATCCCAAGACCTCAAA...AATGGGGAAGACAGTTAGTGGGCAGCTTTCCCAATCCCTAAGGCAAATGATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR GCA 90 bp CAAGGTGAACAAAAGATCCTAGGGGTGTCATACTTCATCATCTGGCAGTGTTCGATGGAGGAAATCATTTaGCTTAGGGATTGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: QGEQKILGVSYFIIWQCSMEEII*LRDWES
Trigger: GCTTTCCCAATCCCTAAGGCAAATGATTTCCTCCAT...CGAACACTGCCAGATGATGAAGTATGACACCCCTAGGATCTTTTGTTCACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR TCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAAAAGGCATTAAAGGCTaGAGTAGTCTGGGATTTTTA +
Preference number: 2 (lower is better)
Translates to: VWLSWIQIELRVPDSESRKGIKG*SSLGFL
Trigger: TAAAAATCCCAGACTACTTCAGCCTTTAATGCCTTT...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
3UTR-3UTR GCA 90 bp GAAATCATTTGCCTTAGGGATTGGGAAAGCTGCCCACTAACTGTCTTCCCCATTCAAATACCAAAATGTTaGAGTAGGAGGGCAAAGGTT +
Preference number: 2 (lower is better)
Translates to: EIICLRDWESCPLTVFPIQIPKC*SRRAKV
Trigger: AACCTTTGCCCTCCTACTGCAACATTTTGGTATTTG...AATGGGGAAGACAGTTAGTGGGCAGCTTTCCCAATCCCTAAGGCAAATGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR CCA 90 bp TGGCATATCCGTCAGGTTAAACTCCACAGTTTTCCTCCTCACTTGAGATACTTCAAGGTGTGGCTGTCTTaGATTCAGATAGAACTAAGG +
Preference number: 2 (lower is better)
Translates to: WHIRQVKLHSFPPHLRYFKVWLS*IQIELR
Trigger: CCTTAGTTCTATCTGAATCCAAGACAGCCACACCTT...GAAGTATCTCAAGTGAGGAGGAAAACTGTGGAGTTTAACCTGACGGATATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
3UTR-3UTR CCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAACAGTATACTAAGGTGTaGCTGTCTTGGATTCAGATA +
Preference number: 2 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEQYTKV*LSWIQI
Trigger: TATCTGAATCCAAGACAGCCACACCTTAGTATACTG...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
3UTR-3UTR CCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCAAGGCTGAAGTAGTCTaGGATTTTTATCTATTAAGC +
Preference number: 2 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPKAEVV*DFYLLS
Trigger: GCTTAATAGATAAAAATCCCAGACTACTTCAGCCTT...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
3UTR-3UTR GCA 90 bp GGTGTCATACTTCATCATCTGGCAGTGTTCGGGTATCAGAAATCACTTAAACTAAGCAGGTTAGGAATGTaGTTCATCCCTAGTGAGAAT +
Preference number: 2 (lower is better)
Translates to: GVILHHLAVFGYQKSLKLSRLGM*FIPSEN
Trigger: ATTCTCACTAGGGATGAAGCACATTCCTAACCTGCT...TAGTTTAAGTGATTTCTGATACCCGAACACTGCCAGATGATGAAGTATGACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR CCA 90 bp GGTGTCATACTTCATCATCTGGCAGTGTTCGGGTATCAGAAATCACTTAAACTAGTTAAATGTTTCCAATaGTTCAGTCTAGCTTTCACA +
Preference number: 2 (lower is better)
Translates to: GVILHHLAVFGYQKSLKLVKCFQ*FSLAFT
Trigger: TGTGAAAGCTAGACTGAACCATTGGAAACATTTAAC...TAGTTTAAGTGATTTCTGATACCCGAACACTGCCAGATGATGAAGTATGACACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR TCA 72 bp GGTGATCATGGGACTGCAGGCCTAGGAAGCGGCCAATaGTGCCAGCGTGAGCATCCTCCTCGTCCTCCTGAT +
Preference number: 3 (lower is better)
Translates to: GDHGTAGLGSGQ*CQREHPPRPPD
Trigger: ATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTCCTAGGCCTGCAGTCCCATGATCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
3UTR CCA 72 bp GCCTGTCAGCCCTGGGGCAGTTCTCCAGCAGCATTCTaGTCAGCACAACCTCATCTTCCTTCACCTGGTCCC +
Preference number: 3 (lower is better)
Translates to: ACQPWGSSPAAF*SAQPHLPSPGP
Trigger: GGGACCAGGTGAAGGAAGATGAGGTTGTGCTGACCAGAATGCTGCTGGAGAACTGCCCCAGGGCTGACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CAA 90 bp GACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCTGCCACCTCATGGTTTaGGGTCAGCCACCCTTGCTC +
Preference number: 3 (lower is better)
Translates to: DLKASTALSFQALLSSWPCHLMV*GQPPLL
Trigger: GAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCA...GGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR TCA 72 bp GCCAGTGCTGGGCGTAGGTCCAGTGTGCTCTGGCAGTaGTGGAACCCTAGGAAATTGTGGAGGAAGGGTAGG +
Preference number: 3 (lower is better)
Translates to: ASAGRRSSVLWQ*WNPRKLWRKGR
Trigger: CCTACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CAA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTGCTTCATCCCTCAACCTCCTGCGTaGGGACTACAGGCACACCAC +
Preference number: 3 (lower is better)
Translates to: DLAGEASPLGSRLGMCFIPQPPA*GLQAHH
Trigger: GTGGTGTGCCTGTAGTCCCAACGCAGGAGGTTGAGG...GATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR CAA 90 bp AACCTCATCTTCCTTCACCTGGTCCCAAGAAGTCTTCCGGGTGATACCAGGGTGGCTGCCTTGTGGTTTTaGGGCAGGCCCTCGTGGAGA +
Preference number: 3 (lower is better)
Translates to: NLIFLHLVPRSLPGDTRVAALWF*GRPSWR
Trigger: TCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGC...CACCCTGGTATCACCCGGAAGACTTCTTGGGACCAGGTGAAGGAAGATGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CAA 90 bp GACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCTTCTGTTTGGCTGCCTaGTGGTTTTTGGGCAGGCCC +
Preference number: 3 (lower is better)
Translates to: DLKASTALSFQALLSSWPFCLAA*WFLGRP
Trigger: GGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAA...GGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CCA 72 bp TTTTGGGCAGGCCCTCGTGGAGAAGGGATTCCCTCTTaGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: FWAGPRGEGIPS*ATVVWSLSLPW
Trigger: CCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCACGAGGGCCTGCCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CCA 72 bp TCTTCCTGGCCCCTAACGTTCTGTTTGGCTGCCTTGTaGTTTTTGGGCAGGCCCTCGTGGAGAAGGGATTCC +
Preference number: 3 (lower is better)
Translates to: SSWPLTFCLAAL*FLGRPSWRRDS
Trigger: GGAATCCCTTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CCA 72 bp CTGTGGGGCACTGTAGTAGCCTGGCCTCTGATACAGTaGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTT +
Preference number: 3 (lower is better)
Translates to: LWGTVVAWPLIQ*GRLEGVHSLKL
Trigger: AAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACTGTATCAGAGGCCAGGCTACTACAGTGCCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR GCA 72 bp CTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTaGCTTGTGGTTTTTGGGCAGGCCCTCGTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: LVVFLAPNVLFG*LVVFGQALVEK
Trigger: CTTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CCA 72 bp ATAACATCTGCTCAGCTAAGCCTGGCCTGTCAGCCCTaGGGCAGTTCTCCAGCAGCATTCTGGTCAGCACAA +
Preference number: 3 (lower is better)
Translates to: ITSAQLSLACQP*GSSPAAFWSAQ
Trigger: TTGTGCTGACCAGAATGCTGCTGGAGAACTGCCCCAGGGCTGACAGGCCAGGCTTAGCTGAGCAGATGTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
3UTR CCA 72 bp TCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTaGGAGGATGGTGATCATGGGACTGCAGGCCTAGGA +
Preference number: 3 (lower is better)
Translates to: SWATVVWSLSLP*EDGDHGTAGLG
Trigger: TCCTAGGCCTGCAGTCCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CCA 72 bp TGTTTGGCTGCCTTGTGGTTTTTGGGCAGGCCCTCGTaGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: CLAALWFLGRPS*RRDSLLGHSSL
Trigger: CAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR CAA 90 bp CACTGTGAAGCTTTGACGGCGCTGATGGTTCTAGGGGGAAGAACATGGGAGTGGAGAAGGGATTCCCTCTaGGGCCACAGTAGTTTGGTC +
Preference number: 3 (lower is better)
Translates to: HCEALTALMVLGGRTWEWRRDSL*GHSSLV
Trigger: GACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCT...CCACTCCCATGTTCTTCCCCCTAGAACCATCAGCGCCGTCAAAGCTTCACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR GCA 72 bp GTTATGGGGGAAGTGTTCATCTGTCATCCAGCTGACTaGCACCTCATGGTTTTGGGTCAGCCACCCTTGCTC +
Preference number: 3 (lower is better)
Translates to: VMGEVFICHPAD*HLMVLGQPPLL
Trigger: GAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGGATGACAGATGAACACTTCCCCCATAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
3UTR GCA 72 bp ATATACCCCAAGCCAGTGCTGGGCGTAGGTCCAGTGTaGTCTGGCAGTGATGGAACCCTAGGAAATTGTGGA +
Preference number: 3 (lower is better)
Translates to: IYPKPVLGVGPV*SGSDGTLGNCG
Trigger: TCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGCTTGGGGTATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR CCA 72 bp CGTGGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTaGTCCTTGAGTTTGCCCTGGGAGGATGGTGATCAT +
Preference number: 3 (lower is better)
Translates to: RGEGIPSWATVV*SLSLPWEDGDH
Trigger: ATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR CAA 90 bp GCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTTTGGGCCACAGTAGTTaGGTCCTTGAGTTTGCCCTG +
Preference number: 3 (lower is better)
Translates to: ALSFQALLSSWPLTFCLALGHSS*VLEFAL
Trigger: CAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAA...AGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR CAA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTAGAAGGGATTCCCTCTaGGGCCACAGTAGTTTGGTC +
Preference number: 3 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSRRDSL*GHSSLV
Trigger: GACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCT...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CAA 90 bp TTCCCTAGGATCCCTGTGAAGGTGGCCAAGTATATACCCCAAGCCAGTGCTGGGCCCCTAACGTTCTGTTaGGCTGCCTTGTGGTTTTTG +
Preference number: 3 (lower is better)
Translates to: FPRIPVKVAKYIPQASAGPLTFC*AALWFL
Trigger: CAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGG...CCCAGCACTGGCTTGGGGTATATACTTGGCCACCTTCACAGGGATCCTAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR TCA 72 bp CATCTTCCTTCACCTGGTCCCAAGAAGTCTTCCGGGTaGTACCAGGGTGAAGTGAGAAAAGGTCCCGAACAC +
Preference number: 3 (lower is better)
Translates to: HLPSPGPKKSSG*YQGEVRKGPEH
Trigger: GTGTTCGGGACCTTTTCTCACTTCACCCTGGTATCACCCGGAAGACTTCTTGGGACCAGGTGAAGGAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR CCA 72 bp TCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTaGCCCCTAACGTTCTGTTTGGCTGCCTTGTGGTTT +
Preference number: 3 (lower is better)
Translates to: STALSFQALLSS*PLTFCLAALWF
Trigger: AAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR-3UTR CAA 90 bp AGTGGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTCTTGCTCAAAGTAAGTaGGGGCCAGTGATAACATCT +
Preference number: 3 (lower is better)
Translates to: SGADLKASTALSFQALLSLAQSK*GPVITS
Trigger: AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAG...AGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR-3UTR CAA 90 bp CACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTACAGTAGTTTGGTCCTaGAGTTTGCCCTGGGAGGAT +
Preference number: 3 (lower is better)
Translates to: HSLKLPGLVVFLAPNVLFTVVWS*SLPWED
Trigger: ATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGT...AAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR TCA 72 bp GGAAGCAAGAAGTATTTTGGTGAGGTTCCCAGGCAGTaGGAAAATGACCTAAGGGCGCTGGACACCCTCAAC +
Preference number: 3 (lower is better)
Translates to: GSKKYFGEVPRQ*ENDLRALDTLN
Trigger: GTTGAGGGTGTCCAGCGCCCTTAGGTCATTTTCTCACTGCCTGGGAACCTCACCAAAATACTTCTTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR CAA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTCTTGCTCAAAGTAAGTaGGGGCCAGTGATAACATCT +
Preference number: 3 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSLAQSK*GPVITS
Trigger: AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAG...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
3UTR-3UTR CAA 90 bp GGCTGGATTGCAGTTGCTCAATCTCACTGCAACCACCACCTCCTGGGTTCAAGCCGTGAAAGTAACTGCTaGAGAATCCAGAAAAGGGAA +
Preference number: 3 (lower is better)
Translates to: GWIAVAQSHCNHHLLGSSRESNC*RIQKRE
Trigger: TTCCCTTTTCTGGATTCTCAAGCAGTTACTTTCACG...GCTTGAACCCAGGAGGTGGTGGTTGCAGTGAGATTGAGCAACTGCAATCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR CAA 90 bp ACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTCAAAACTTACAGTAGTTTGGTCCTaGAGTTTGCCCTGGGAGGAT +
Preference number: 3 (lower is better)
Translates to: TSGCSIKAPSLSESNSKLTVVWS*SLPWED
Trigger: ATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGT...AAGTTTTGAATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR TCA 72 bp AATAGTTATGGGGGAAGTGTTCATCTGTCATCCAGCTaGCTGCCACCTCATGGTTTTGGGTCAGCCACCCTT +
Preference number: 3 (lower is better)
Translates to: NSYGGSVHLSSS*LPPHGFGSATL
Trigger: AAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGGATGACAGATGAACACTTCCCCCATAACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
3UTR-3UTR CAA 90 bp TCCCTTCATTTCAAATACCAAAATGTTGCAGTAGGAGGGCAAAGGTTGAGACGATTGGGTCAGCCACCCTaGCTCAAAGTAAGTTGGGGC +
Preference number: 3 (lower is better)
Translates to: SLHFKYQNVAVGGQRLRRLGQPP*LKVSWG
Trigger: GCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAA...TCGTCTCAACCTTTGCCCTCCTACTGCAACATTTTGGTATTTGAAATGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR CAA 90 bp GGTGTCATACTTCATCATCTGGCAGTGTTCGGGTATCAGAAATCACTTAAACTATGCCACCTCATGGTTTaGGGTCAGCCACCCTTGCTC +
Preference number: 3 (lower is better)
Translates to: GVILHHLAVFGYQKSLKLCHLMV*GQPPLL
Trigger: GAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCA...TAGTTTAAGTGATTTCTGATACCCGAACACTGCCAGATGATGAAGTATGACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR GCA 72 bp GGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTaGTTCATCCCTAGTGAGAATGAAAGTATTAACAGC +
Preference number: 3 (lower is better)
Translates to: GEASPLGSRLGM*FIPSENESINS
Trigger: GCTGTTAATACTTTCATTCTCACTAGGGATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR GCA 72 bp ATGGAGGAAATCATTTGCCTTAGGGATTGGGAAAGCTaGCCACTAACTGTCTTCCCCATTGTTTTGCAGTTG +
Preference number: 3 (lower is better)
Translates to: MEEIICLRDWES*PLTVFPIVLQL
Trigger: CAACTGCAAAACAATGGGGAAGACAGTTAGTGGGCAGCTTTCCCAATCCCTAAGGCAAATGATTTCCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR-3UTR CAA 90 bp TCCCTTCATTTCAAATACCAAAATGTTGCAGTAGGAGGGCAAAGGTTGAGACGAGAAGCAAGAAGTATTTaGGTGAGGTTCCCAGGCAGT +
Preference number: 3 (lower is better)
Translates to: SLHFKYQNVAVGGQRLRREARSI*VRFPGS
Trigger: ACTGCCTGGGAACCTCACCAAAATACTTCTTGCTTC...TCGTCTCAACCTTTGCCCTCCTACTGCAACATTTTGGTATTTGAAATGAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR TCA 72 bp ATGTTGGTTGGTGATTGTTCCAAAGGTTCTTTGAGGTaGTTTTCGGGGATCTCTGGCATATCCGTCAGGTTA +
Preference number: 3 (lower is better)
Translates to: MLVGDCSKGSLR*FSGISGISVRL
Trigger: TAACCTGACGGATATGCCAGAGATCCCCGAAAATCACCTCAAAGAACCTTTGGAACAATCACCAACCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR TCA 72 bp TGTGTATGTTGGTTGGTGATTGTTCCAAAGGTTCTTTaGGGTGATTTTCGGGGATCTCTGGCATATCCGTCA +
Preference number: 3 (lower is better)
Translates to: CVCWLVIVPKVL*GDFRGSLAYPS
Trigger: TGACGGATATGCCAGAGATCCCCGAAAATCACCTCAAAGAACCTTTGGAACAATCACCAACCAACATACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR TCA 72 bp ATAGAACTAAGGGTTCCCGACTCTGAATCCAGAGTCTaGGTTAAATGTTTCCAATGGTTCAGTCTAGCTTTC +
Preference number: 3 (lower is better)
Translates to: IELRVPDSESRV*VKCFQWFSLAF
Trigger: GAAAGCTAGACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCCTTAGTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
3UTR GCA 72 bp ATCATAATAGCTGCGTGTTCTGACCGTGAAAGTAACTaGTTGAGAATCCAGAAAAGGGAAGTTACACTTCCT +
Preference number: 3 (lower is better)
Translates to: IIIAACSDRESN*LRIQKREVTLP
Trigger: AGGAAGTGTAACTTCCCTTTTCTGGATTCTCAAGCAGTTACTTTCACGGTCAGAACACGCAGCTATTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR TCA 72 bp CCCAAGACAAGATTCTTAAATATTAACATCCTTTGCTaGACAGGCCACAGATGTTTGCCAAGTTCCTGTCTA +
Preference number: 3 (lower is better)
Translates to: PKTRFLNINILC*TGHRCLPSSCL
Trigger: TAGACAGGAACTTGGCAAACATCTGTGGCCTGTTCAGCAAAGGATGTTAATATTTAAGAATCTTGTCTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGCCGACACCAGGCTCATaGGGCGGTCGGGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLPTPGS*GGRATA
Trigger: TGCCGTGGCCCGACCGCCTCATGAGCCTGGTGTCGG...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR TCA 90 bp TACCCCAAGCCAGTGCTGGGCGTAGGTCCAGTGTGCTCTGGCAGTGATGGAACCCTGGCACTGCCCACGTaGGTGCTGAGCCGCCGTCAC +
Preference number: 4 (lower is better)
Translates to: YPKPVLGVGPVCSGSDGTLALPT*VLSRRH
Trigger: GTGACGGCGGCTCAGCACTCACGTGGGCAGTGCCAG...GGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGCTTGGGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR GCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGCCTGCTTGCACCAGGTaGTGGGCGCTGGGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLPACTR*WALGKR
Trigger: GCGCTTCCCCAGCGCCCAGCACCTGGTGCAAGCAGG...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR TCA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCACCGACACCAGGCTCATaGGGCGGTCGGGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPPTPGS*GGRATA
Trigger: TGCCGTGGCCCGACCGCCTCATGAGCCTGGTGTCGG...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp TGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATGGTGATCATGGGCCGACACCAGGCTCATaGGGCGGTCGGGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: WATVVWSLSLPWEDGDHGPTPGS*GGRATA
Trigger: TGCCGTGGCCCGACCGCCTCATGAGCCTGGTGTCGG...CCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp AGTGGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTCCGACACCAGGCTCATaGGGCGGTCGGGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: SGADLKASTALSFQALLSPTPGS*GGRATA
Trigger: TGCCGTGGCCCGACCGCCTCATGAGCCTGGTGTCGG...AGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGCCCTGGGAGGATGGTaGTCATGGGACTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLALGGW*SWDCRP
Trigger: AGGCCTGCAGTCCCATGATCACCATCCTCCCAGGGC...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR GCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCCGCAGCAGCCGGCCTTaGTCGTCCTTGCCTTCGACG +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELRSSRP*SSLPST
Trigger: CGTCGAAGGCAAGGACGAGCAAGGCCGGCTGCTGCG...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR CCA 90 bp TACCCCAAGCCAGTGCTGGGCGTAGGTCCAGTGTGCTCTGGCAGTGATGGAACCGTCTGGCGACTAGGCTaGTGGGACTCCCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: YPKPVLGVGPVCSGSDGTVWRLG*WDSLGL
Trigger: GAGTCCCAGGGAGTCCCACCAGCCTAGTCGCCAGAC...GGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGCTTGGGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGCTGAGGGGCGTCTGTaGGGCACTGTAGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLAEGRL*GTVVAW
Trigger: CCAGGCTACTACAGTGCCCCACAGACGCCCCTCAGC...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCGTGAGGGCCAGCAGGTaGGGTTCCAGGTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELVRASR*GSRWVR
Trigger: TCGGACCCACCTGGAACCCCACCTGCTGGCCCTCAC...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACCCGACACCAGGCTCATaGGGCGGTCGGGCCACGGCA +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHPTPGS*GGRATA
Trigger: TGCCGTGGCCCGACCGCCTCATGAGCCTGGTGTCGG...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCACCTGCTTGCACCAGGTaGTGGGCGCTGGGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPPACTR*WALGKR
Trigger: GCGCTTCCCCAGCGCCCAGCACCTGGTGCAAGCAGG...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp CACTGTGAAGCTTTGACGGCGCTGATGGTTCTAGGGGGAAGAACATGGGAGTGGCCTGCTTGCACCAGGTaGTGGGCGCTGGGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: HCEALTALMVLGGRTWEWPACTR*WALGKR
Trigger: GCGCTTCCCCAGCGCCCAGCACCTGGTGCAAGCAGG...CCACTCCCATGTTCTTCCCCCTAGAACCATCAGCGCCGTCAAAGCTTCACAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR GCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGCCACCACGCCTGGCTaGTTTCTACCCGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLATTPG*FLPVRP
Trigger: AGGTCTCACGGGTAGAAAGCAGCCAGGCGTGGTGGC...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR GCA 90 bp TGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATGGTGATCATGGGGCTGCTTGCACCAGGTaGTGGGCGCTGGGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: WATVVWSLSLPWEDGDHGAACTR*WALGKR
Trigger: GCGCTTCCCCAGCGCCCAGCACCTGGTGCAAGCAGC...CCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCCCAGGTGCTGGGCGCTaGGGAAGCGCTTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELPGAGR*GSACRL
Trigger: CAGTCTACAAGCGCTTCCCCAGCGCCCAGCACCTGG...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR CCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGAGGGTAGGCCTTGGCTaGGTTCAGAAACTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLRVGLG*VQKLPP
Trigger: GGGCGGCAGTTTCTGAACCCAGCCAAGGCCTACCCT...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CCA 90 bp TACCCCAAGCCAGTGCTGGGCGTAGGTCCAGTGTGCTCTGGCAGTGATGGAACCCCCACTCTTAGAGGCTaGCACTGCCCACGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: YPKPVLGVGPVCSGSDGTPTLRG*HCPREC
Trigger: GCACTCACGTGGGCAGTGCCAGCCTCTAAGAGTGGG...GGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGCTTGGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGTCCTCCTCGTCCTCCTaGTTGGGCTGGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLSSSSS*LGWNSI
Trigger: GATGGAGTTCCAGCCCAATCAGGAGGACGAGGAGGA...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR TCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCCCAATGATGCCAGCGTaGGCATCCTCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELPMMPA*ASSSSS
Trigger: GGAGGACGAGGAGGATGCTCACGCTGGCATCATTGG...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR TCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGCTAGGAAGCGGCCAATaGTGCCAGCGTGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLLGSGQ*CQREHP
Trigger: AGGATGCTCACGCTGGCATCATTGGCCGCTTCCTAG...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR TCA 90 bp TACCCCAAGCCAGTGCTGGGCGTAGGTCCAGTGTGCTCTGGCAGTGATGGAACCCTAGGAAGCGGCCAATaGTGCCAGCGTGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: YPKPVLGVGPVCSGSDGTLGSGQ*CQREHP
Trigger: AGGATGCTCACGCTGGCATCATTGGCCGCTTCCTAG...GGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGCTTGGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp GAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGCCCTGGGAGGATGGTaGTCATGGGACTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: EGVHSLKLPGLVVFLAPNALGGW*SWDCRP
Trigger: AGGCCTGCAGTCCCATGATCACCATCCTCCCAGGGC...GTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR GCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCGAAGCGCTTGTAGACTaGGGTGCTGACGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELEALVD*GADAAQ
Trigger: CTGCGCAGCGTCAGCACCGCAGTCTACAAGCGCTTC...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR GCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGTCATAAAGCCTGCTTaGACCAGGTGCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLVIKPA*TRCWAL
Trigger: CAGCGCCCAGCACCTGGTGCAAGCAGGCTTTATGAC...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR GCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGGCGTAGGTCCAGTGTaGTCTGGCAGTGATGGAACC +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLGVGPV*SGSDGT
Trigger: GGTTCCATCACTGCCAGAGCACACTGGACCTACGCC...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR GCA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAAGTTGATGAGCTGCTCTaGCACCACAACCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: AANDASVSILLVLLIGLEVDELL*HHNLRL
Trigger: GAGGCGGAGGTTGTGGTGGCAGAGCAGCTCATCAAC...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CCA 90 bp TCCTGGCCCCTAACGTTCTGTTTGGCTGCCTTGTGGTTTTTGGGCAGGCCCTCGGGCAGGTTCTCGTACTaGTTCCACCAGCGGGTCACG +
Preference number: 4 (lower is better)
Translates to: SWPLTFCLAALWFLGRPSGRFSY*FHQRVT
Trigger: CGTGACCCGCTGGTGGAACCAGTACGAGAACCTGCC...CGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCGGCAGGTTCTCGTACTaGTTCCACCAGCGGGTCACG +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELGRFSY*FHQRVT
Trigger: CGTGACCCGCTGGTGGAACCAGTACGAGAACCTGCC...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR CCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCTCGTTCAGCAGGCTCTaGAGCAGGATAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELSFSRL*SRIGSR
Trigger: CCGGGACCCTATCCTGCTCCAGAGCCTGCTGAACGA...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCGGCCAGGGTAGGCCTTaGCTGGGTTCAGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELGQGRP*LGSETA
Trigger: GGCAGTTTCTGAACCCAGCCAAGGCCTACCCTGGCC...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR TCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGCGAAGGAAATGGGGATaGGCTGGATGTAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLRRKWG*AGCSCR
Trigger: GCGACAGCTACATCCAGCTCATCCCCATTTCCTTCG...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR TCA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAAAGAACTGCAGGAACGTaGAGACGGGCACAACGAGGT +
Preference number: 4 (lower is better)
Translates to: AANDASVSILLVLLIGLERTAGT*RRAQRG
Trigger: ACCTCGTTGTGCCCGTCTTCACGTTCCTGCAGTTCT...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR TCA 90 bp TTCCTGGCCCCTAACGTTCTGTTTGGCTGCCTTGTGGTTTTTGGGCAGGCCCTCTGGTGTACACACAGGTaGGGACCTGGCTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: FLAPNVLFGCLVVFGQALWCTHR*GPGWRS
Trigger: GCTTCGCCAGCCAGGTCCTCACCTGTGTGTACACCA...GAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR GCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACCGCAGCAGCCGGCCTTaGTCGTCCTTGCCTTCGACG +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHRSSRP*SSLPST
Trigger: CGTCGAAGGCAAGGACGAGCAAGGCCGGCTGCTGCG...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCGTCATAAAGCCTGCTTaGACCAGGTGCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELVIKPA*TRCWAL
Trigger: CAGCGCCCAGCACCTGGTGCAAGCAGGCTTTATGAC...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR GCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCGTTGATGAGCTGCTCTaGCACCACAACCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELVDELL*HHNLRL
Trigger: GAGGCGGAGGTTGTGGTGGCAGAGCAGCTCATCAAC...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR GCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGAAGGGGTTGATGAGCTaGTCTGCCACCACAACCTCC +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLKGLMS*SATTTS
Trigger: GGAGGTTGTGGTGGCAGAGCAGCTCATCAACCCCTT...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CCA 90 bp GAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGGCAGGTTCTCGTACTaGTTCCACCAGCGGGTCACG +
Preference number: 4 (lower is better)
Translates to: EGVHSLKLPGLVVFLAPNGRFSY*FHQRVT
Trigger: CGTGACCCGCTGGTGGAACCAGTACGAGAACCTGCC...GTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp TGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATGGTGATCATGGGCCAGGTGCTGGGCGCTaGGGAAGCGCTTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: WATVVWSLSLPWEDGDHGPGAGR*GSACRL
Trigger: CAGTCTACAAGCGCTTCCCCAGCGCCCAGCACCTGG...CCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACCTCGTCCTCCTGATTaGGCTGGAACTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: AANDASVSILLVLLIGLEPRPPD*AGTPSP
Trigger: AGGAGATGGAGTTCCAGCCCAATCAGGAGGACGAGG...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR CCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGCTGCCTTGTGGTTTTTaGGCAGGCCCTCGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLLPCGF*AGPRGE
Trigger: TTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAG...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp GGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGTCCAGGTGGGTCCGATaGTCCCACAGAAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GEGIPSWATVVWSLSLPWSRWVR*SHRRSG
Trigger: GCCAGACCTTCTGTGGGATCATCGGACCCACCTGGA...CCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp CCAGTGTGCTCTGGCAGTGATGGAACCCTAGGAAATTGTGGAGGAAGGGTAGGCTCCAGGTGGGTCCGATaGTCCCACAGAAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PVCSGSDGTLGNCGGRVGSRWVR*SHRRSG
Trigger: GCCAGACCTTCTGTGGGATCATCGGACCCACCTGGA...GCCTACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGAAGCCACGCCTTCATTaGCAGGTTGGCAAACCACAC +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLKPRLH*QVGKPH
Trigger: GTGTGGTTTGCCAACCTGTCAATGAAGGCGTGGCTT...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR TCA 90 bp GCCCTGGGGCAGTTCTCCAGCAGCATTCTGGTCAGCACAACCTCATCTTCCTTCTCCTCCTCGTCCTCCTaGTTGGGCTGGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: ALGQFSSSILVSTTSSSFSSSSS*LGWNSI
Trigger: GATGGAGTTCCAGCCCAATCAGGAGGACGAGGAGGA...GAAGGAAGATGAGGTTGTGCTGACCAGAATGCTGCTGGAGAACTGCCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGCCAATGATGCCAGCGTaGGCATCCTCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRPMMPA*ASSSSS
Trigger: GGAGGACGAGGAGGATGCTCACGCTGGCATCATTGG...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCACCAATGATGCCAGCGTaGGCATCCTCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPPMMPA*ASSSSS
Trigger: GGAGGACGAGGAGGATGCTCACGCTGGCATCATTGG...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp CACTGTGAAGCTTTGACGGCGCTGATGGTTCTAGGGGGAAGAACATGGGAGTGGCCAATGATGCCAGCGTaGGCATCCTCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HCEALTALMVLGGRTWEWPMMPA*ASSSSS
Trigger: GGAGGACGAGGAGGATGCTCACGCTGGCATCATTGG...CCACTCCCATGTTCTTCCCCCTAGAACCATCAGCGCCGTCAAAGCTTCACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp TACCCCAAGCCAGTGCTGGGCGTAGGTCCAGTGTGCTCTGGCAGTGATGGAACCATGCCTGTGACACTGTaGAGCTTTGACGGCGCTGAT +
Preference number: 4 (lower is better)
Translates to: YPKPVLGVGPVCSGSDGTMPVTL*SFDGAD
Trigger: ATCAGCGCCGTCAAAGCTTCACAGTGTCACAGGCAT...GGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGCTTGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp CCAGTGTGCTCTGGCAGTGATGGAACCCTAGGAAATTGTGGAGGAAGGGTAGGCGCTGTTGTTCTTCCGTaGGGGCCAGCAGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PVCSGSDGTLGNCGGRVGAVVLP*GPAGGV
Trigger: AACCCCACCTGCTGGCCCTCACGGAAGAACAACAGC...GCCTACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAAGCTGCTTTCTACCCGTaGGACCTTCCTTTCCTGACA +
Preference number: 4 (lower is better)
Translates to: AANDASVSILLVLLIGLEAAFYP*DLPFLT
Trigger: TGTCAGGAAAGGAAGGTCTCACGGGTAGAAAGCAGC...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR TCA 90 bp TCCTGGCCCCTAACGTTCTGTTTGGCTGCCTTGTGGTTTTTGGGCAGGCCCTCGTGGAGGGTGTTGGGCTaGGACCAGGGCTGGAATTTA +
Preference number: 4 (lower is better)
Translates to: SWPLTFCLAALWFLGRPSWRVLG*DQGWNL
Trigger: TAAATTCCAGCCCTGGTCTCAGCCCAACACCCTCCA...CGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR GCA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGGGCCTTGCTCGTCCTTaGCTTCGACGAAGCCCGACA +
Preference number: 4 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRGLARP*LRRSPT
Trigger: TGTCGGGCTTCGTCGAAGGCAAGGACGAGCAAGGCC...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGCTGGGTTCAGAAACTaGCGCCCAACTAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: EAANDASVSILLVLLIGLAGFRN*RPTRQV
Trigger: GACTTGTCTAGTTGGGCGGCAGTTTCTGAACCCAGC...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR GCA 90 bp GAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGCACAGGGCAATGCAGTaGCCCTGGTTCAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: EGIPSWATVVWSLSLPWEHRAMQ*PWFRWR
Trigger: CCTCCACCTGAACCAGGGGCACTGCATTGCCCTGTG...CTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR GCA 90 bp CACTGTGAAGCTTTGACGGCGCTGATGGTTCTAGGGGGAAGAACATGGGAGTGGGCCACCACGCCTGGCTaGTTTCTACCCGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: HCEALTALMVLGGRTWEWATTPG*FLPVRP
Trigger: AGGTCTCACGGGTAGAAAGCAGCCAGGCGTGGTGGC...CCACTCCCATGTTCTTCCCCCTAGAACCATCAGCGCCGTCAAAGCTTCACAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR GCA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAATTCAGTTTCACTGGCTaGAGTCCGCACCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AANDASVSILLVLLIGLEFSFTG*SPHLSP
Trigger: TGGGGAAAGGTGCGGACTGCAGCCAGTGAAACTGAA...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526988.1
ENST00000534553.5
CDS-3UTR CCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACTGGGCTTGGGTCAGGTaGGGTTCCAGGTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHWAWVR*GSRWVR
Trigger: TCGGACCCACCTGGAACCCCACCTGACCCAAGCCCA...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378043.9
ENST00000524926.5
CDS-3UTR CCA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACCTTCATTGACAGGTTaGCAAACCACACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AANDASVSILLVLLIGLEPSLTG*QTTPRA
Trigger: TGCCCTGGGTGTGGTTTGCCAACCTGTCAATGAAGG...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CCA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGAGGGTAGGCCTTGGCTaGGTTCAGAAACTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRRVGLG*VQKLPP
Trigger: GGGCGGCAGTTTCTGAACCCAGCCAAGGCCTACCCT...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp TGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATGGTGATCATGGGGGCCAGGGTAGGCCTTaGCTGGGTTCAGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: WATVVWSLSLPWEDGDHGGQGRP*LGSETA
Trigger: GGCAGTTTCTGAACCCAGCCAAGGCCTACCCTGGCC...CCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CCA 90 bp GCCTGGCCTCTGATACAGTGGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTTTGGGCAGGCCCTCGTaGAGAAGGGATTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: AWPLIQWGRLEGVHSLKLLGRPS*RRDSLL
Trigger: CAAGAGGGAATCCCTTCTCCACGAGGGCCTGCCCAA...AAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACTGTATCAGAGGCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp AACCTCATCTTCCTTCACCTGGTCCCAAGAAGTCTTCCGGGTGATACCAGGGTGGCTGAGGGGCGTCTGTaGGGCACTGTAGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: NLIFLHLVPRSLPGDTRVAEGRL*GTVVAW
Trigger: CCAGGCTACTACAGTGCCCCACAGACGCCCCTCAGC...CACCCTGGTATCACCCGGAAGACTTCTTGGGACCAGGTGAAGGAAGATGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp GGCAGTTCTCCAGCAGCATTCTGGTCAGCACAACCTCATCTTCCTTCACCTGGTCTGGCCTGTCAGCCCTaGGGCAGTTCTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSSPAAFWSAQPHLPSPGLACQP*GSSPAA
Trigger: TGCTGCTGGAGAACTGCCCCAGGGCTGACAGGCCAG...ACCAGGTGAAGGAAGATGAGGTTGTGCTGACCAGAATGCTGCTGGAGAACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
3UTR CAA 72 bp CAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTaGGCTGCCTTGTGGTTTTTGGGCAGGCCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: QALLSSWPLTFC*AALWFLGRPSW
Trigger: CCACGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTGCTTCATCTCCAGGTGGGTCCGATaGTCCCACAGAAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: DLAGEASPLGSRLGMCFISRWVR*SHRRSG
Trigger: GCCAGACCTTCTGTGGGATCATCGGACCCACCTGGA...GATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GCCTGGCCTCTGATACAGTGGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTAGAACTGCAGGAACGTaGAGACGGGCACAACGAGGT +
Preference number: 4 (lower is better)
Translates to: AWPLIQWGRLEGVHSLKLRTAGT*RRAQRG
Trigger: ACCTCGTTGTGCCCGTCTTCACGTTCCTGCAGTTCT...AAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACTGTATCAGAGGCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR TCA 90 bp GGCTGGATTGCAGTTGCTCAATCTCACTGCAACCACCACCTCCTGGGTTCAAGCTCCTCCTCGTCCTCCTaGTTGGGCTGGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: GWIAVAQSHCNHHLLGSSSSSSS*LGWNSI
Trigger: GATGGAGTTCCAGCCCAATCAGGAGGACGAGGAGGA...GCTTGAACCCAGGAGGTGGTGGTTGCAGTGAGATTGAGCAACTGCAATCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGTCCTCCTCGTCCTCCTaGTTGGGCTGGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRSSSSS*LGWNSI
Trigger: GATGGAGTTCCAGCCCAATCAGGAGGACGAGGAGGA...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp CACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGCCCTGGGAGGATGGTaGTCATGGGACTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: HSLKLPGLVVFLAPNVLFALGGW*SWDCRP
Trigger: AGGCCTGCAGTCCCATGATCACCATCCTCCCAGGGC...AAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCATGCCTGTGACACTGTaGAGCTTTGACGGCGCTGAT +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELMPVTL*SFDGAD
Trigger: ATCAGCGCCGTCAAAGCTTCACAGTGTCACAGGCAT...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACTGGTGTACACACAGGTaGGGACCTGGCTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHWCTHR*GPGWRS
Trigger: GCTTCGCCAGCCAGGTCCTCACCTGTGTGTACACCA...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCAACACTTCCTCCCACGTaGTTGGGGCTGAAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPTLPPT*LGLKWG
Trigger: ACCCCACTTCAGCCCCAATCACGTGGGAGGAAGTGT...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp GCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTGAAGCGCTTGTAGACTaGGGTGCTGACGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: ALSFQALLSSWPLTFCLAEALVD*GADAAQ
Trigger: CTGCGCAGCGTCAGCACCGCAGTCTACAAGCGCTTC...AGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR GCA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCAGTTTCTCCAACTaGTTGTGTTCTGCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: AANDASVSILLVLLIGLELSFSN*LCSAGV
Trigger: GACTCCGGCAGAACACAAGCAGTTGGAGAAACTGAG...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR GCA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAAGCCAACAGGGACACCTaGAAATTCCTGTCGACAATC +
Preference number: 4 (lower is better)
Translates to: AANDASVSILLVLLIGLEANRDT*KFLSTI
Trigger: GATTGTCGACAGGAATTTGCAGGTGTCCCTGTTGGC...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR GCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACCACAGGGCAATGCAGTaGCCCTGGTTCAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHHRAMQ*PWFRWR
Trigger: CCTCCACCTGAACCAGGGGCACTGCATTGCCCTGTG...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp AGTGGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTATCCCACAGAAGGTCTaGCGACTAGGCTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SGADLKASTALSFQALLSIPQKV*RLGWWD
Trigger: GTCCCACCAGCCTAGTCGCCAGACCTTCTGTGGGAT...AGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp TTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTGCCTTGTGGTTTTTGGGCAGGAGGGTAGGCCTTGGCTaGGTTCAGAAACTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LSSWPLTFCLAALWFLGRRVGLG*VQKLPP
Trigger: GGGCGGCAGTTTCTGAACCCAGCCAAGGCCTACCCT...CCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CCA 90 bp CACTGTGAAGCTTTGACGGCGCTGATGGTTCTAGGGGGAAGAACATGGGAGTGGGGCACTGTAGTAGCCTaGCCTCTGATACAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HCEALTALMVLGGRTWEWGTVVA*PLIQWG
Trigger: GCCCCACTGTATCAGAGGCCAGGCTACTACAGTGCC...CCACTCCCATGTTCTTCCCCCTAGAACCATCAGCGCCGTCAAAGCTTCACAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp GGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATGGCACTGTAGTAGCCTaGCCTCTGATACAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GIPSWATVVWSLSLPWEDGTVVA*PLIQWG
Trigger: GCCCCACTGTATCAGAGGCCAGGCTACTACAGTGCC...ATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp GGCTGGATTGCAGTTGCTCAATCTCACTGCAACCACCACCTCCTGGGTTCAAGCACACAGGTGAGGACCTaGCTGGCGAAGCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: GWIAVAQSHCNHHLLGSSTQVRT*LAKHPH
Trigger: ATGGGGATGCTTCGCCAGCCAGGTCCTCACCTGTGT...GCTTGAACCCAGGAGGTGGTGGTTGCAGTGAGATTGAGCAACTGCAATCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR CAA 72 bp TGGCCCCTAACGTTCTGTTTGGCTGCCTTGTGGTTTTaGGGCAGGCCCTCGTGGAGAAGGGATTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: WPLTFCLAALWF*GRPSWRRDSLL
Trigger: CAAGAGGGAATCCCTTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGCGAAGGAAATGGGGATaGGCTGGATGTAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRRRKWG*AGCSCR
Trigger: GCGACAGCTACATCCAGCTCATCCCCATTTCCTTCG...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGCGAAGGAAATGGGGATaGGCTGGATGTAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GEGIPSWATVVWSLSLPWRRKWG*AGCSCR
Trigger: GCGACAGCTACATCCAGCTCATCCCCATTTCCTTCG...CCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCTACAGGTGTCCACACTaGGTACGCAAGGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELYRCPH*VRKVFI
Trigger: GATGAACACCTTGCGTACTCAGTGTGGACACCTGTA...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR TCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACCTAGGAAGCGGCCAATaGTGCCAGCGTGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHLGSGQ*CQREHP
Trigger: AGGATGCTCACGCTGGCATCATTGGCCGCTTCCTAG...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCGTTTTCCTCCTCACTTaGGATACTTCTGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELVFLLT*DTSGCS
Trigger: GGAGCACCCAGAAGTATCTCAAGTGAGGAGGAAAAC...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp GGCTGGATTGCAGTTGCTCAATCTCACTGCAACCACCACCTCCTGGGTTCAAGCCAGGCAGTGAGAAAATaGCCTAAGGGCGCTGGACAC +
Preference number: 4 (lower is better)
Translates to: GWIAVAQSHCNHHLLGSSQAVRK*PKGAGH
Trigger: GTGTCCAGCGCCCTTAGGTCATTTTCTCACTGCCTG...GCTTGAACCCAGGAGGTGGTGGTTGCAGTGAGATTGAGCAACTGCAATCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp CTTGAGATACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTGAAGCGCTTGTAGACTaGGGTGCTGACGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: LEILLGAPSRPHRSLRAIEALVD*GADAAQ
Trigger: CTGCGCAGCGTCAGCACCGCAGTCTACAAGCGCTTC...AATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGTATCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR GCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCCAACTGCTTGTGTTCTaGCGGAGTCATAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELQLLVF*RSHKAC
Trigger: GCAGGCTTTATGACTCCGGCAGAACACAAGCAGTTG...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR GCA 90 bp CACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTTGGGGCACAGGGCAATaGAGTGCCCCTGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: HSLKLPGLVVFLAPNVLFWGTGQ*SAPGSG
Trigger: ACCTGAACCAGGGGCACTGCATTGCCCTGTGCCCCA...AAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR GCA 90 bp TGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATGGTGATCATGGGAAGGGGTTGATGAGCTaGTCTGCCACCACAACCTCC +
Preference number: 4 (lower is better)
Translates to: WATVVWSLSLPWEDGDHGKGLMS*SATTTS
Trigger: GGAGGTTGTGGTGGCAGAGCAGCTCATCAACCCCTT...CCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR GCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTTGTGGCCAGTGCCCCTaGCCACTCTTAGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GFGSATLAQSKLGPVITSCGQCP*PLLEAG
Trigger: GCCAGCCTCTAAGAGTGGGCAGGGGCACTGGCCACA...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR GCA 90 bp TGGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGTTTGTTCAGGCTGCTTaGACCAGGTGCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: WRRDSLLGHSSLVLEFALFVQAA*TRCWAL
Trigger: CAGCGCCCAGCACCTGGTGCAAGCAGCCTGAACAAA...CAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp ACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTCAAAACTTCCAGGTGCTGGGCGCTaGGGAAGCGCTTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: TSGCSIKAPSLSESNSKLPGAGR*GSACRL
Trigger: CAGTCTACAAGCGCTTCCCCAGCGCCCAGCACCTGG...AAGTTTTGAATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGCCTCGTCCTCCTGATTaGGCTGGAACTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRPRPPD*AGTPSP
Trigger: AGGAGATGGAGTTCCAGCCCAATCAGGAGGACGAGG...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACTTGGGCAGGCCCTCGTaGAGAAGGGATTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHLGRPS*RRDSLL
Trigger: CAAGAGGGAATCCCTTCTCCACGAGGGCCTGCCCAA...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp CACTGTGAAGCTTTGACGGCGCTGATGGTTCTAGGGGGAAGAACATGGGAGTGGCTGCCTTGTGGTTTTTaGGCAGGCCCTCGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: HCEALTALMVLGGRTWEWLPCGF*AGPRGE
Trigger: TTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAG...CCACTCCCATGTTCTTCCCCCTAGAACCATCAGCGCCGTCAAAGCTTCACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCATGTTTGGCTGCCTTGTaGTTTTTGGGCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPCLAAL*FLGRPS
Trigger: CGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACA...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp AGTGGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTGTTTGGCTGCCTTGTaGTTTTTGGGCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: SGADLKASTALSFQALLSCLAAL*FLGRPS
Trigger: CGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACA...AGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp CACTGTGAAGCTTTGACGGCGCTGATGGTTCTAGGGGGAAGAACATGGGAGTGGTGGCCTCTGATACAGTaGGGCAGACTTGAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: HCEALTALMVLGGRTWEWWPLIQ*GRLEGV
Trigger: GACGCCTTCAAGTCTGCCCCACTGTATCAGAGGCCA...CCACTCCCATGTTCTTCCCCCTAGAACCATCAGCGCCGTCAAAGCTTCACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACACACAGGTGAGGACCTaGCTGGCGAAGCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHTQVRT*LAKHPH
Trigger: ATGGGGATGCTTCGCCAGCCAGGTCCTCACCTGTGT...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACCTGTATGGCTGTGACTaGATCAGTGTCCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EGVHSLKLPGLVVFLAPNLYGCD*ISVLLV
Trigger: CACCAGCAGGACACTGATCCAGTCACAGCCATACAG...GTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACGTGAGGGCCAGCAGGTaGGGTTCCAGGTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDVRASR*GSRWVR
Trigger: TCGGACCCACCTGGAACCCCACCTGCTGGCCCTCAC...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp GGCTGGATTGCAGTTGCTCAATCTCACTGCAACCACCACCTCCTGGGTTCAAGCTGCCCCTGGTTCAGGTaGAGGACAGACCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GWIAVAQSHCNHHLLGSSCPWFR*RTDLFS
Trigger: GGAAAACAGGTCTGTCCTCCACCTGAACCAGGGGCA...GCTTGAACCCAGGAGGTGGTGGTTGCAGTGAGATTGAGCAACTGCAATCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp GGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATTGCCCCTGGTTCAGGTaGAGGACAGACCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GIPSWATVVWSLSLPWEDCPWFR*RTDLFS
Trigger: GGAAAACAGGTCTGTCCTCCACCTGAACCAGGGGCA...ATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCAGCCACCTCATGGTTTTaGGTCAGCCACCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPATSWF*VSHPCS
Trigger: TGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGC...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR CAA 72 bp ATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTaGCCCTGGGAGGATGGTGATCATGGGACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: IPSWATVVWSLS*PWEDGDHGTAG
Trigger: GCCTGCAGTCCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CAA 72 bp TTTTTGGGCAGGCCCTCGTGGAGAAGGGATTCCCTCTaGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: FLGRPSWRRDSL*GHSSLVLEFAL
Trigger: CAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCACGAGGGCCTGCCCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CAA 72 bp TTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTGCCTaGTGGTTTTTGGGCAGGCCCTCGTGGAGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: LSSWPLTFCLAA*WFLGRPSWRRD
Trigger: ATCCCTTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CAA 72 bp TTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTaGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKASTALSFQAL*SSWPLTFCLAA
Trigger: GGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp GGCTGGATTGCAGTTGCTCAATCTCACTGCAACCACCACCTCCTGGGTTCAAGCAAGCCACGCCTTCATTaGCAGGTTGGCAAACCACAC +
Preference number: 4 (lower is better)
Translates to: GWIAVAQSHCNHHLLGSSKPRLH*QVGKPH
Trigger: GTGTGGTTTGCCAACCTGTCAATGAAGGCGTGGCTT...GCTTGAACCCAGGAGGTGGTGGTTGCAGTGAGATTGAGCAACTGCAATCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp GACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCTACAGGTGTCCACACTaGGTACGCAAGGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: DLKASTALSFQALLSSWPYRCPH*VRKVFI
Trigger: GATGAACACCTTGCGTACTCAGTGTGGACACCTGTA...GGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR TCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACGCCCTGGGAGGATGGTaGTCATGGGACTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDALGGW*SWDCRP
Trigger: AGGCCTGCAGTCCCATGATCACCATCCTCCCAGGGC...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACGAGGTTCCCAGGCAGTaGGAAAATGACCTAAGGGCG +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHEVPRQ*ENDLRA
Trigger: CGCCCTTAGGTCATTTTCTCACTGCCTGGGAACCTC...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACATAGCAGCTTGTAGATaGTGCCCCGCCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHIAACR*CPASTA
Trigger: TGCTGTGCTGGCGGGGCAGCATCTACAAGCTGCTAT...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378043.9
ENST00000524926.5
CDS-3UTR GCA 90 bp TGGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGATAGCAGCTTGTAGATaGTGCCCCGCCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: WRRDSLLGHSSLVLEFALIAACR*CPASTA
Trigger: TGCTGTGCTGGCGGGGCAGCATCTACAAGCTGCTAT...CAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR GCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAACGCAGCAGCCGGCCTTaGTCGTCCTTGCCTTCGACG +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSERSSRP*SSLPST
Trigger: CGTCGAAGGCAAGGACGAGCAAGGCCGGCTGCTGCG...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp CCATTAGGAAGCAGGTTAGGAATGTGCTTCATCCCTGTTTTCCAAGGCCCAATACGCAGCAGCCGGCCTTaGTCGTCCTTGCCTTCGACG +
Preference number: 4 (lower is better)
Translates to: PLGSRLGMCFIPVFQGPIRSSRP*SSLPST
Trigger: CGTCGAAGGCAAGGACGAGCAAGGCCGGCTGCTGCG...TATTGGGCCTTGGAAAACAGGGATGAAGCACATTCCTAACCTGCTTCCTAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR GCA 90 bp TGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATGGTGATCATGGGGCCAGTGATAACATCTaGTCAGCTAAGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: WATVVWSLSLPWEDGDHGASDNI*SAKPGL
Trigger: CAGGCCAGGCTTAGCTGAGCAGATGTTATCACTGGC...CCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR GCA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGAGGGATTGGGAAAGCTaGCCACTAACTGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRRDWES*PLTVFP
Trigger: GGGGAAGACAGTTAGTGGGCAGCTTTCCCAATCCCT...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp GAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGTTCAGTTTCACTGGCTaGAGTCCGCACCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: EGIPSWATVVWSLSLPWEFSFTG*SPHLSP
Trigger: TGGGGAAAGGTGCGGACTGCAGCCAGTGAAACTGAA...CTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAGTCTGGCGACTAGGCTaGTGGGACTCCCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRVWRLG*WDSLGL
Trigger: GAGTCCCAGGGAGTCCCACCAGCCTAGTCGCCAGAC...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378043.9
CDS-3UTR CCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCTGCAGCAGGTGGGCTTaGGTCAGGTGGGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPCSRWA*VRWGSR
Trigger: CCTGGAACCCCACCTGACCCAAGCCCACCTGCTGCA...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378043.9
ENST00000524926.5
CDS-3UTR CCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCCCAGGTGCTGGGCGCTaGGGAAGCGCTTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPPGAGR*GSACRL
Trigger: CAGTCTACAAGCGCTTCCCCAGCGCCCAGCACCTGG...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGCCTTCATTGACAGGTTaGCAAACCACACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRPSLTG*QTTPRA
Trigger: TGCCCTGGGTGTGGTTTGCCAACCTGTCAATGAAGG...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTCCTCGTCCTCCTGATTaGGCTGGAACTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: ALSFQALLSSWPLTFCLAPRPPD*AGTPSP
Trigger: AGGAGATGGAGTTCCAGCCCAATCAGGAGGACGAGG...AGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp TGCAGTGCCCCTGGTTCAGGTGGAGGACAGACCTGTTTTCCAAGGCCCAATAAGTCCTTGAGTTTGCCCTaGGAGGATGGTGATCATGGG +
Preference number: 4 (lower is better)
Translates to: CSAPGSGGGQTCFPRPNKSLSLP*EDGDHG
Trigger: CCCATGATCACCATCCTCCCAGGGCAAACTCAAGGA...CTTATTGGGCCTTGGAAAACAGGTCTGTCCTCCACCTGAACCAGGGGCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp CACTGTGAAGCTTTGACGGCGCTGATGGTTCTAGGGGGAAGAACATGGGAGTGGTGGGCCACAGTAGTTTaGTCCTTGAGTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: HCEALTALMVLGGRTWEWWATVV*SLSLPW
Trigger: CCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCA...CCACTCCCATGTTCTTCCCCCTAGAACCATCAGCGCCGTCAAAGCTTCACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACTGGCCTCTGATACAGTaGGGCAGACTTGAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHWPLIQ*GRLEGV
Trigger: GACGCCTTCAAGTCTGCCCCACTGTATCAGAGGCCA...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGCACTTGAGATACTTCTaGGTGCTCCATCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRHLRYF*VLHQGP
Trigger: GGGGCCTTGATGGAGCACCCAGAAGTATCTCAAGTG...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGCTGTATGGCTGTGACTaGATCAGTGTCCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRLYGCD*ISVLLV
Trigger: CACCAGCAGGACACTGATCCAGTCACAGCCATACAG...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GGCAGTTCTCCAGCAGCATTCTGGTCAGCACAACCTCATCTTCCTTCACCTGGTGCCACCTCATGGTTTTaGGTCAGCCACCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: GSSPAAFWSAQPHLPSPGATSWF*VSHPCS
Trigger: TGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGC...ACCAGGTGAAGGAAGATGAGGTTGTGCTGACCAGAATGCTGCTGGAGAACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACCTGACTGCCACCTCATaGTTTTGGGTCAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHLTATS*FWVSHP
Trigger: AGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAG...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR CAA 72 bp GAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTaGAGTTTGCCCTGGGAGGATGGTGATCATGGGACT +
Preference number: 4 (lower is better)
Translates to: EGIPSWATVVWS*SLPWEDGDHGT
Trigger: AGTCCCATGATCACCATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
3UTR CAA 72 bp GACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTaGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: DLKASTALSFQA*LSSWPLTFCLA
Trigger: AGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAAGCCACGCCTTCATTaGCAGGTTGGCAAACCACAC +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHKPRLH*QVGKPH
Trigger: GTGTGGTTTGCCAACCTGTCAATGAAGGCGTGGCTT...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACGCTGTTGTTCTTCCGTaGGGGCCAGCAGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDAVVLP*GPAGGV
Trigger: AACCCCACCTGCTGGCCCTCACGGAAGAACAACAGC...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp GAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGAGTGTGCTCTGGCAGTaGTGGAACCCTAGGAAATTG +
Preference number: 4 (lower is better)
Translates to: EGIPSWATVVWSLSLPWESVLWQ*WNPRKL
Trigger: CAATTTCCTAGGGTTCCATCACTGCCAGAGCACACT...CTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp GAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGTCCCTAGGATCCCTGTaGAGGTGGCCAAGTATATAC +
Preference number: 4 (lower is better)
Translates to: EGIPSWATVVWSLSLPWESLGSL*RWPSIY
Trigger: GTATATACTTGGCCACCTTCACAGGGATCCTAGGGA...CTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCATTGGTCTCAAACTCCTaGCCTCCTGTGATCCACTTG +
Preference number: 4 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPLVSNS*PPVIHL
Trigger: CAAGTGGATCACAGGAGGTCAGGAGTTTGAGACCAA...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATCCTGCTTGCACCAGGTaGTGGGCGCTGGGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYPACTR*WALGKR
Trigger: GCGCTTCCCCAGCGCCCAGCACCTGGTGCAAGCAGG...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp CACTGTGAAGCTTTGACGGCGCTGATGGTTCTAGGGGGAAGAACATGGGAGTGGCAACTGCTTGTGTTCTaGCGGAGTCATAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: HCEALTALMVLGGRTWEWQLLVF*RSHKAC
Trigger: GCAGGCTTTATGACTCCGGCAGAACACAAGCAGTTG...CCACTCCCATGTTCTTCCCCCTAGAACCATCAGCGCCGTCAAAGCTTCACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR GCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACTGGGGCACAGGGCAATaGAGTGCCCCTGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDWGTGQ*SAPGSG
Trigger: ACCTGAACCAGGGGCACTGCATTGCCCTGTGCCCCA...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp TGCAGTGCCCCTGGTTCAGGTGGAGGACAGACCTGTTTTCCAAGGCCCAATAAGTGTCATCCAGCTGACTaGCACCTCATGGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: CSAPGSGGGQTCFPRPNKCHPAD*HLMVLG
Trigger: ACCCAAAACCATGAGGTGGCAGTCAGCTGGATGACA...CTTATTGGGCCTTGGAAAACAGGTCTGTCCTCCACCTGAACCAGGGGCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR GCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACGTTGCTCAATCTCACTaGAACCACCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHVAQSH*NHHLLG
Trigger: ACCCAGGAGGTGGTGGTTGCAGTGAGATTGAGCAAC...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp GCCCTGGGGCAGTTCTCCAGCAGCATTCTGGTCAGCACAACCTCATCTTCCTTCTCCCTTCTTGTAATCTaGTCAGAAGCAACGGCTAGC +
Preference number: 4 (lower is better)
Translates to: ALGQFSSSILVSTTSSSFSLLVI*SEATAS
Trigger: GCTAGCCGTTGCTTCTGAGCAGATTACAAGAAGGGA...GAAGGAAGATGAGGTTGTGCTGACCAGAATGCTGCTGGAGAACTGCCCCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp ACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTCAAAACTTATCCCACAGAAGGTCTaGCGACTAGGCTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: TSGCSIKAPSLSESNSKLIPQKV*RLGWWD
Trigger: GTCCCACCAGCCTAGTCGCCAGACCTTCTGTGGGAT...AAGTTTTGAATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp CCATTAGGAAGCAGGTTAGGAATGTGCTTCATCCCTGTTTTCCAAGGCCCAATATGGGCTTGGGTCAGGTaGGGTTCCAGGTGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: PLGSRLGMCFIPVFQGPIWAWVR*GSRWVR
Trigger: TCGGACCCACCTGGAACCCCACCTGACCCAAGCCCA...TATTGGGCCTTGGAAAACAGGGATGAAGCACATTCCTAACCTGCTTCCTAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAGGCAGGTTCTCGTACTaGTTCCACCAGCGGGTCACG +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRGRFSY*FHQRVT
Trigger: CGTGACCCGCTGGTGGAACCAGTACGAGAACCTGCC...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACGGCAGGTTCTCGTACTaGTTCCACCAGCGGGTCACG +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDGRFSY*FHQRVT
Trigger: CGTGACCCGCTGGTGGAACCAGTACGAGAACCTGCC...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTGCTTCATCCCTTCATTGACAGGTTaGCAAACCACACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: DLAGEASPLGSRLGMCFIPSLTG*QTTPRA
Trigger: TGCCCTGGGTGTGGTTTGCCAACCTGTCAATGAAGG...GATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCTCGTTCAGCAGGCTCTaGAGCAGGATAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPSFSRL*SRIGSR
Trigger: CCGGGACCCTATCCTGCTCCAGAGCCTGCTGAACGA...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACAGGGTAGGCCTTGGCTaGGTTCAGAAACTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDRVGLG*VQKLPP
Trigger: GGGCGGCAGTTTCTGAACCCAGCCAAGGCCTACCCT...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTTTGGGCAGGCCCTCGTaGAGAAGGGATTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GFGSATLAQSKLGPVITSLGRPS*RRDSLL
Trigger: CAAGAGGGAATCCCTTCTCCACGAGGGCCTGCCCAA...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
CDS-3UTR CCA 90 bp CTTGAGATACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTTGTTTGGCTGCCTTGTaGTTTTTGGGCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LEILLGAPSRPHRSLRAICLAAL*FLGRPS
Trigger: CGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACA...AATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGTATCTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCGCTGAGGGGCGTCTGTaGGGCACTGTAGTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVAEGRL*GTVVAW
Trigger: CCAGGCTACTACAGTGCCCCACAGACGCCCCTCAGC...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTCTGTATGGCTGTGACTaGATCAGTGTCCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSLYGCD*ISVLLV
Trigger: CACCAGCAGGACACTGATCCAGTCACAGCCATACAG...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp CTTGAGATACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTCTGACTGCCACCTCATaGTTTTGGGTCAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: LEILLGAPSRPHRSLRAILTATS*FWVSHP
Trigger: AGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAG...AATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGTATCTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTAGAACTGCAGGAACGTaGAGACGGGCACAACGAGGT +
Preference number: 4 (lower is better)
Translates to: GFGSATLAQSKLGPVITSRTAGT*RRAQRG
Trigger: ACCTCGTTGTGCCCGTCTTCACGTTCCTGCAGTTCT...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAACCAATGATGCCAGCGTaGGCATCCTCCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEPMMPA*ASSSSS
Trigger: GGAGGACGAGGAGGATGCTCACGCTGGCATCATTGG...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCCTAGGAAGCGGCCAATaGTGCCAGCGTGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPLGSGQ*CQREHP
Trigger: AGGATGCTCACGCTGGCATCATTGGCCGCTTCCTAG...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACCTAGGAAGCGGCCAATaGTGCCAGCGTGAGCATCCT +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDLGSGQ*CQREHP
Trigger: AGGATGCTCACGCTGGCATCATTGGCCGCTTCCTAG...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGAAAGGTTCTTTGAGGTaGTTTTCGGGGATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRKGSLR*FSGISG
Trigger: GCCAGAGATCCCCGAAAATCACCTCAAAGAACCTTT...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp CACTGTGAAGCTTTGACGGCGCTGATGGTTCTAGGGGGAAGAACATGGGAGTGGAAAGGTTCTTTGAGGTaGTTTTCGGGGATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HCEALTALMVLGGRTWEWKGSLR*FSGISG
Trigger: GCCAGAGATCCCCGAAAATCACCTCAAAGAACCTTT...CCACTCCCATGTTCTTCCCCCTAGAACCATCAGCGCCGTCAAAGCTTCACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp GCCCTGGGGCAGTTCTCCAGCAGCATTCTGGTCAGCACAACCTCATCTTCCTTCGTTCCAAAGGTTCTTTaGGGTGATTTTCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: ALGQFSSSILVSTTSSSFVPKVL*GDFRGS
Trigger: AGATCCCCGAAAATCACCTCAAAGAACCTTTGGAAC...GAAGGAAGATGAGGTTGTGCTGACCAGAATGCTGCTGGAGAACTGCCCCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp GTGTGCTCTGGCAGTGATGGAACCCTAGGAAATTGTGGAGGAAGGGTAGGCTCAGATACCAGGGTGAAGTaGGAAAAGGTCCCGAACACT +
Preference number: 4 (lower is better)
Translates to: VCSGSDGTLGNCGGRVGSDTRVK*EKVPNT
Trigger: AGTGTTCGGGACCTTTTCTCACTTCACCCTGGTATC...TGAGCCTACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp TGGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGCATCTGTCATCCAGCTaGCTGCCACCTCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: WRRDSLLGHSSLVLEFALHLSSS*LPPHGF
Trigger: AAAACCATGAGGTGGCAGTCAGCTGGATGACAGATG...CAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCACCACGTGATTGGGGCTaGAGTGGGGTGTTTATAATT +
Preference number: 4 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPPRDWG*SGVFII
Trigger: AATTATAAACACCCCACTTCAGCCCCAATCACGTGG...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp CTTGAGATACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTGCTGCTTTCTACCCGTaGGACCTTCCTTTCCTGACA +
Preference number: 4 (lower is better)
Translates to: LEILLGAPSRPHRSLRAIAAFYP*DLPFLT
Trigger: TGTCAGGAAAGGAAGGTCTCACGGGTAGAAAGCAGC...AATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGTATCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR GCA 90 bp GAAATCATTTGCCTTAGGGATTGGGAAAGCTGCCCACTAACTGTCTTCCCCATTGGCCTTGCTCGTCCTTaGCTTCGACGAAGCCCGACA +
Preference number: 4 (lower is better)
Translates to: EIICLRDWESCPLTVFPIGLARP*LRRSPT
Trigger: TGTCGGGCTTCGTCGAAGGCAAGGACGAGCAAGGCC...AATGGGGAAGACAGTTAGTGGGCAGCTTTCCCAATCCCTAAGGCAAATGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAAGAAGCGCTTGTAGACTaGGGTGCTGACGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEEALVD*GADAAQ
Trigger: CTGCGCAGCGTCAGCACCGCAGTCTACAAGCGCTTC...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCGAAGCGCTTGTAGACTaGGGTGCTGACGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVEALVD*GADAAQ
Trigger: CTGCGCAGCGTCAGCACCGCAGTCTACAAGCGCTTC...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTCTCAGTTTCTCCAACTaGTTGTGTTCTGCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSLSFSN*LCSAGV
Trigger: GACTCCGGCAGAACACAAGCAGTTGGAGAAACTGAG...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTGCTTCATCGCCAACAGGGACACCTaGAAATTCCTGTCGACAATC +
Preference number: 4 (lower is better)
Translates to: DLAGEASPLGSRLGMCFIANRDT*KFLSTI
Trigger: GATTGTCGACAGGAATTTGCAGGTGTCCCTGTTGGC...GATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp TGCAGTGCCCCTGGTTCAGGTGGAGGACAGACCTGTTTTCCAAGGCCCAATAAGAACGTTCTGTTTGGCTaGCTTGTGGTTTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CSAPGSGGGQTCFPRPNKNVLFG*LVVFGQ
Trigger: CTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTT...CTTATTGGGCCTTGGAAAACAGGTCTGTCCTCCACCTGAACCAGGGGCACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAATCCCACAGAAGGTCTaGCGACTAGGCTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRIPQKV*RLGWWD
Trigger: GTCCCACCAGCCTAGTCGCCAGACCTTCTGTGGGAT...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378043.9
ENST00000524926.5
CDS-3UTR CCA 90 bp TGGCATATCCGTCAGGTTAAACTCCACAGTTTTCCTCCTCACTTGAGATACTTCTGCAGCAGGTGGGCTTaGGTCAGGTGGGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: WHIRQVKLHSFPPHLRYFCSRWA*VRWGSR
Trigger: CCTGGAACCCCACCTGACCCAAGCCCACCTGCTGCA...GAAGTATCTCAAGTGAGGAGGAAAACTGTGGAGTTTAACCTGACGGATATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCTCGTTCAGCAGGCTCTaGAGCAGGATAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVSFSRL*SRIGSR
Trigger: CCGGGACCCTATCCTGCTCCAGAGCCTGCTGAACGA...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCCTGTGTATACACCAGTaGGATACTAATCCAGTCGTA +
Preference number: 4 (lower is better)
Translates to: ANDASVSILLVLLIGLELLCIHQ*DTNPVV
Trigger: TACGACTGGATTAGTATCCCACTGGTGTATACACAG...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CCA 90 bp CGTGAAAGTAACTGCTTGAGAATCCAGAAAAGGGAAGTTACACTTCCTCCCACGGGCCAGGGTAGGCCTTaGCTGGGTTCAGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: RESNCLRIQKREVTLPPTGQGRP*LGSETA
Trigger: GGCAGTTTCTGAACCCAGCCAAGGCCTACCCTGGCC...CGTGGGAGGAAGTGTAACTTCCCTTTTCTGGATTCTCAAGCAGTTACTTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTCCTCGTCCTCCTGATTaGGCTGGAACTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: GFGSATLAQSKLGPVITSPRPPD*AGTPSP
Trigger: AGGAGATGGAGTTCCAGCCCAATCAGGAGGACGAGG...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
CDS-3UTR CCA 90 bp CTTGAGATACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTGAAGGGATTCCCTCTTaGGCCACAGTAGTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LEILLGAPSRPHRSLRAIEGIPS*ATVVWS
Trigger: GGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTC...AATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGTATCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp GCATTCTGGTCAGCACAACCTCATCTTCCTTCACCTGGTCCCAAGAAGTCTTCCGAAGGGATTCCCTCTTaGGCCACAGTAGTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: AFWSAQPHLPSPGPKKSSEGIPS*ATVVWS
Trigger: GGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTC...GGAAGACTTCTTGGGACCAGGTGAAGGAAGATGAGGTTGTGCTGACCAGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTGCTTCATCGCCTTGTTGTCTTCCTaGCCCCTAACGTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: DLAGEASPLGSRLGMCFIALLSS*PLTFCL
Trigger: CAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGC...GATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp CACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTCACTTGAGATACTTCTaGGTGCTCCATCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: HSLKLPGLVVFLAPNVLFHLRYF*VLHQGP
Trigger: GGGGCCTTGATGGAGCACCCAGAAGTATCTCAAGTG...AAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCACACAGGTGAGGACCTaGCTGGCGAAGCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPTQVRT*LAKHPH
Trigger: ATGGGGATGCTTCGCCAGCCAGGTCCTCACCTGTGT...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp TGGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGTCATCTTCCTTCACCTaGTCCCAAGAAGTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: WRRDSLLGHSSLVLEFALSSSFT*SQEVFR
Trigger: CCGGAAGACTTCTTGGGACCAGGTGAAGGAAGATGA...CAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTCTCCGTCGCCCAGGCTaGATTGCAGTTGCTCAATCT +
Preference number: 4 (lower is better)
Translates to: GFGSATLAQSKLGPVITSLRRPG*IAVAQS
Trigger: AGATTGAGCAACTGCAATCCAGCCTGGGCGACGGAG...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCACCTTTTGCCAAAACGTaGTGGTTAGAGATGATGGGC +
Preference number: 4 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPPFAKT*WLEMMG
Trigger: GCCCATCATCTCTAACCACCACGTTTTGGCAAAAGG...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGACGAAGGAAATGGGGATaGGCTGGATGTAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRRRKWG*AGCSCR
Trigger: GCGACAGCTACATCCAGCTCATCCCCATTTCCTTCG...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCTCCTCGTCCTCCTaGTTGGGCTGGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSESSSSS*LGWNSI
Trigger: GATGGAGTTCCAGCCCAATCAGGAGGACGAGGAGGA...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp TGGCATATCCGTCAGGTTAAACTCCACAGTTTTCCTCCTCACTTGAGATACTTCGGCCTTGCTCGTCCTTaGCTTCGACGAAGCCCGACA +
Preference number: 4 (lower is better)
Translates to: WHIRQVKLHSFPPHLRYFGLARP*LRRSPT
Trigger: TGTCGGGCTTCGTCGAAGGCAAGGACGAGCAAGGCC...GAAGTATCTCAAGTGAGGAGGAAAACTGTGGAGTTTAACCTGACGGATATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR GCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCGTCATAAAGCCTGCTTaGACCAGGTGCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVVIKPA*TRCWAL
Trigger: CAGCGCCCAGCACCTGGTGCAAGCAGGCTTTATGAC...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACGTTGATGAGCTGCTCTaGCACCTTCAGCCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDVDELL*HLQPAN
Trigger: GTTGGCTGGCTGAAGGTGGCAGAGCAGCTCATCAAC...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378043.9
ENST00000449131.6
CDS-3UTR GCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACAAGGGGTTGATGAGCTaGTCTGCCACCTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDKGLMS*SATFSQ
Trigger: CTGGCTGAAGGTGGCAGAGCAGCTCATCAACCCCTT...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378043.9
ENST00000449131.6
CDS-3UTR GCA 90 bp CAAGGTGAACAAAAGATCCTAGGGGTGTCATACTTCATCATCTGGCAGTGTTCGGGCGTAGGTCCAGTGTaGTCTGGCAGTGATGGAACC +
Preference number: 4 (lower is better)
Translates to: QGEQKILGVSYFIIWQCSGVGPV*SGSDGT
Trigger: GGTTCCATCACTGCCAGAGCACACTGGACCTACGCC...CGAACACTGCCAGATGATGAAGTATGACACCCCTAGGATCTTTTGTTCACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATCCAGGTGCTGGGCGCTaGGGAAGCGCTTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYPGAGR*GSACRL
Trigger: CAGTCTACAAGCGCTTCCCCAGCGCCCAGCACCTGG...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATTGGGCAGGCCCTCGTaGAGAAGGGATTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSELGRPS*RRDSLL
Trigger: CAAGAGGGAATCCCTTCTCCACGAGGGCCTGCCCAA...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGACTGCCTTGTGGTTTTTaGGCAGGCCCTCGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRLPCGF*AGPRGE
Trigger: TTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAG...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp CACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGCCTTGTTGTCTTCCTaGCCCCTAACGTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: HSLKLPGLVVFLAPNVLFALLSS*PLTFCL
Trigger: CAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGC...AAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAAGGCACTGTAGTAGCCTaGCCTCTGATACAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEGTVVA*PLIQWG
Trigger: GCCCCACTGTATCAGAGGCCAGGCTACTACAGTGCC...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTCACTTGAGATACTTCTaGGTGCTCCATCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GFGSATLAQSKLGPVITSHLRYF*VLHQGP
Trigger: GGGGCCTTGATGGAGCACCCAGAAGTATCTCAAGTG...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
CDS-3UTR CCA 90 bp GTGTGCTCTGGCAGTGATGGAACCCTAGGAAATTGTGGAGGAAGGGTAGGCTCAAACCCTAGGAAATTGTaGAGGAAGGGTAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VCSGSDGTLGNCGGRVGSNPRKL*RKGRLR
Trigger: TCTGAGCCTACCCTTCCTCCACAATTTCCTAGGGTT...TGAGCCTACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp TCCCTTCATTTCAAATACCAAAATGTTGCAGTAGGAGGGCAAAGGTTGAGACGACTGGCCTGTCAGCCCTaGGGCAGTTCTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLHFKYQNVAVGGQRLRRLACQP*GSSPAA
Trigger: TGCTGCTGGAGAACTGCCCCAGGGCTGACAGGCCAG...TCGTCTCAACCTTTGCCCTCCTACTGCAACATTTTGGTATTTGAAATGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR CAA 72 bp CATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTaGGGGCCAGTGATAACATCTGCTCAGCTAAGCCTG +
Preference number: 4 (lower is better)
Translates to: HGFGSATLAQSK*GPVITSAQLSL
Trigger: CAGGCTTAGCTGAGCAGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
CDS-3UTR TCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATTCCAGGTGGGTCCGATaGTCCCACAGAAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYSRWVR*SHRRSG
Trigger: GCCAGACCTTCTGTGGGATCATCGGACCCACCTGGA...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp CGTGAAAGTAACTGCTTGAGAATCCAGAAAAGGGAAGTTACACTTCCTCCCACGCGAAGGAAATGGGGATaGGCTGGATGTAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: RESNCLRIQKREVTLPPTRRKWG*AGCSCR
Trigger: GCGACAGCTACATCCAGCTCATCCCCATTTCCTTCG...CGTGGGAGGAAGTGTAACTTCCCTTTTCTGGATTCTCAAGCAGTTACTTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAAAGAACTGCAGGAACGTaGAGACGGGCACAACGAGGT +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSERTAGT*RRAQRG
Trigger: ACCTCGTTGTGCCCGTCTTCACGTTCCTGCAGTTCT...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GGTTCAGGTGGAGGACAGACCTGTTTTCCAAGGCCCAATAAGGATCCATGTGATGTTTTCCTCCTCACTTaGGATACTTCTGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSGGGQTCFPRPNKDPCDVFLLT*DTSGCS
Trigger: GGAGCACCCAGAAGTATCTCAAGTGAGGAGGAAAAC...ATCACATGGATCCTTATTGGGCCTTGGAAAACAGGTCTGTCCTCCACCTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR TCA 90 bp GAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTGTATGTTGGTTGGTaGTTGTTCCAAAGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: EGVHSLKLPGLVVFLAPNVYVGW*LFQRFF
Trigger: AAAGAACCTTTGGAACAATCACCAACCAACATACAC...GTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR TCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCACAGCTGTATGGCTGTaGCTGGATCAGTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPTAVWL*LDQCPA
Trigger: AGCAGGACACTGATCCAGTCACAGCCATACAGCTGT...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTGATACCAGGGTGAAGTaGGAAAAGGTCCCGAACACT +
Preference number: 4 (lower is better)
Translates to: GFGSATLAQSKLGPVITSDTRVK*EKVPNT
Trigger: AGTGTTCGGGACCTTTTCTCACTTCACCCTGGTATC...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
CDS-3UTR TCA 90 bp CAAGGTGAACAAAAGATCCTAGGGGTGTCATACTTCATCATCTGGCAGTGTTCGGTGACAGCTTTGGGCTaGCCCCAAGGAAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: QGEQKILGVSYFIIWQCSVTALG*PQGSKK
Trigger: CTTCTTGCTTCCTTGGGGTCAGCCCAAAGCTGTCAC...CGAACACTGCCAGATGATGAAGTATGACACCCCTAGGATCTTTTGTTCACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTGCTTCATCAAATATCTGATTTTGTaGCAGCTTTGGGCTGACCCC +
Preference number: 4 (lower is better)
Translates to: DLAGEASPLGSRLGMCFIKYLIL*QLWADP
Trigger: GGGGTCAGCCCAAAGCTGTCACAAAATCAGATATTT...GATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAGCTGGGTTCAGAAACTaGCGCCCAACTAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRAGFRN*RPTRQV
Trigger: GACTTGTCTAGTTGGGCGGCAGTTTCTGAACCCAGC...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp CACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTAACGTTCTGTTTGGCTaGCTTGTGGTTTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HSLKLPGLVVFLAPNVLFNVLFG*LVVFGQ
Trigger: CTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTT...AAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCCAGGGTAGGCCTTaGCTGGGTTCAGAAACTGCC +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYGQGRP*LGSETA
Trigger: GGCAGTTTCTGAACCCAGCCAAGGCCTACCCTGGCC...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCCCTCGTCCTCCTGATTaGGCTGGAACTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVPRPPD*AGTPSP
Trigger: AGGAGATGGAGTTCCAGCCCAATCAGGAGGACGAGG...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGATCCTTGAGTTTGCCCTaGGAGGATGGTGATCATGGG +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRSLSLP*EDGDHG
Trigger: CCCATGATCACCATCCTCCCAGGGCAAACTCAAGGA...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCTCCTTGAGTTTGCCCTaGGAGGATGGTGATCATGGG +
Preference number: 4 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPSLSLP*EDGDHG
Trigger: CCCATGATCACCATCCTCCCAGGGCAAACTCAAGGA...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGATGGGCCACAGTAGTTTaGTCCTTGAGTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRWATVV*SLSLPW
Trigger: CCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCA...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAGAAGGGATTCCCTCTTaGGCCACAGTAGTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESREGIPS*ATVVWS
Trigger: GGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTC...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGATTTTCGGGGATCTCTaGCATATCCGTCAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: GEGIPSWATVVWSLSLPWIFGDL*HIRQVK
Trigger: TTTAACCTGACGGATATGCCAGAGATCCCCGAAAAT...CCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCGCAACCACCACCTCCTaGGTTCAAGCAATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVATTTS*VQAILP
Trigger: GGGGAGAATTGCTTGAACCCAGGAGGTGGTGGTTGC...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTGCTTCATCATTTGCCTTAGGGATTaGGAAAGCTGCCCACTAACT +
Preference number: 4 (lower is better)
Translates to: DLAGEASPLGSRLGMCFIICLRD*ESCPLT
Trigger: AGTTAGTGGGCAGCTTTCCCAATCCCTAAGGCAAAT...GATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAACTTGGCTTGTGTAAGTaGTGGTCATGGCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSELGLCK*WSWPGS
Trigger: ACTGCCTGGCCATGACCATCACTTACACAAGCCAAG...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378043.9
ENST00000524926.5
CDS-3UTR TCA 90 bp CCATTAGGAAGCAGGTTAGGAATGTGCTTCATCCCTGTTTTCCAAGGCCCAATAAAGCCACGCCTTCATTaGCAGGTTGGCAAACCACAC +
Preference number: 4 (lower is better)
Translates to: PLGSRLGMCFIPVFQGPIKPRLH*QVGKPH
Trigger: GTGTGGTTTGCCAACCTGTCAATGAAGGCGTGGCTT...TATTGGGCCTTGGAAAACAGGGATGAAGCACATTCCTAACCTGCTTCCTAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR TCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGATACAGGTGTCCACACTaGGTACGCAAGGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRYRCPH*VRKVFI
Trigger: GATGAACACCTTGCGTACTCAGTGTGGACACCTGTA...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCATGCCTGTGACACTGTaGAGCTTTGACGGCGCTGAT +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVMPVTL*SFDGAD
Trigger: ATCAGCGCCGTCAAAGCTTCACAGTGTCACAGGCAT...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCAGTGTATGTTGGTTGGTaGTTGTTCCAAAGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPVYVGW*LFQRFF
Trigger: AAAGAACCTTTGGAACAATCACCAACCAACATACAC...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAAACAGCTGTATGGCTGTaGCTGGATCAGTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSETAVWL*LDQCPA
Trigger: AGCAGGACACTGATCCAGTCACAGCCATACAGCTGT...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACATTAACATCCTTTGCTaGACAGGCCACAGATGTTTG +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHINILC*TGHRCL
Trigger: CAAACATCTGTGGCCTGTTCAGCAAAGGATGTTAAT...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGTCATAAAGCCTGCTTaGACCAGGTGCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYVIKPA*TRCWAL
Trigger: CAGCGCCCAGCACCTGGTGCAAGCAGGCTTTATGAC...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGACAACTGCTTGTGTTCTaGCGGAGTCATAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRQLLVF*RSHKAC
Trigger: GCAGGCTTTATGACTCCGGCAGAACACAAGCAGTTG...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCCTCAGTTTCTCCAACTaGTTGTGTTCTGCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPLSFSN*LCSAGV
Trigger: GACTCCGGCAGAACACAAGCAGTTGGAGAAACTGAG...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp GAAATCATTTGCCTTAGGGATTGGGAAAGCTGCCCACTAACTGTCTTCCCCATTGCTGGGTTCAGAAACTaGCGCCCAACTAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: EIICLRDWESCPLTVFPIAGFRN*RPTRQV
Trigger: GACTTGTCTAGTTGGGCGGCAGTTTCTGAACCCAGC...AATGGGGAAGACAGTTAGTGGGCAGCTTTCCCAATCCCTAAGGCAAATGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCGCTGGGTTCAGAAACTaGCGCCCAACTAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVAGFRN*RPTRQV
Trigger: GACTTGTCTAGTTGGGCGGCAGTTTCTGAACCCAGC...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTAACGTTCTGTTTGGCTaGCTTGTGGTTTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GFGSATLAQSKLGPVITSNVLFG*LVVFGQ
Trigger: CTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTT...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
CDS-3UTR GCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAAGCCAGTGATAACATCTaGTCAGCTAAGCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEASDNI*SAKPGL
Trigger: CAGGCCAGGCTTAGCTGAGCAGATGTTATCACTGGC...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATCTCCCCTCAACCTCCTaGGTTGGGACTACAGGCACA +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYLPSTS*VGTTGT
Trigger: TGTGCCTGTAGTCCCAACGCAGGAGGTTGAGGGGAG...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTAGCAGGTTAGGAATGTaGTTCATCCCTAGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSSRLGM*FIPSEN
Trigger: ATTCTCACTAGGGATGAAGCACATTCCTAACCTGCT...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCATCTTCCCCATTGTTTTaGAGTTGTGTGACTTCATTG +
Preference number: 4 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPSSPLF*SCVTSL
Trigger: CAATGAAGTCACACAACTGCAAAACAATGGGGAAGA...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTATGGAGGAAATCATTTaGCTTAGGGATTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSMEEII*LRDWES
Trigger: GCTTTCCCAATCCCTAAGGCAAATGATTTCCTCCAT...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAACCTTCATTGACAGGTTaGCAAACCACACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEPSLTG*QTTPRA
Trigger: TGCCCTGGGTGTGGTTTGCCAACCTGTCAATGAAGG...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTGCTTCATCCTGTGTATACACCAGTaGGATACTAATCCAGTCGTA +
Preference number: 4 (lower is better)
Translates to: DLAGEASPLGSRLGMCFILCIHQ*DTNPVV
Trigger: TACGACTGGATTAGTATCCCACTGGTGTATACACAG...GATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCTGGGCCACAGTAGTTTaGTCCTTGAGTTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVWATVV*SLSLPW
Trigger: CCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCA...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAAGAAGGGATTCCCTCTTaGGCCACAGTAGTTTGGTCC +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEEGIPS*ATVVWS
Trigger: GGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTC...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAGCCTTGTTGTCTTCCTaGCCCCTAACGTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRALLSS*PLTFCL
Trigger: CAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGC...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp CAAGGTGAACAAAAGATCCTAGGGGTGTCATACTTCATCATCTGGCAGTGTTCGCACTTGAGATACTTCTaGGTGCTCCATCAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: QGEQKILGVSYFIIWQCSHLRYF*VLHQGP
Trigger: GGGGCCTTGATGGAGCACCCAGAAGTATCTCAAGTG...CGAACACTGCCAGATGATGAAGTATGACACCCCTAGGATCTTTTGTTCACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp TGGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGATTTTCGGGGATCTCTaGCATATCCGTCAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: WRRDSLLGHSSLVLEFALIFGDL*HIRQVK
Trigger: TTTAACCTGACGGATATGCCAGAGATCCCCGAAAAT...CAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CCA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTGCTTCATCAAGGTGTGGCTGTCTTaGATTCAGATAGAACTAAGG +
Preference number: 4 (lower is better)
Translates to: DLAGEASPLGSRLGMCFIKVWLS*IQIELR
Trigger: CCTTAGTTCTATCTGAATCCAAGACAGCCACACCTT...GATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGCAGTATACTAAGGTGTaGCTGTCTTGGATTCAGATA +
Preference number: 4 (lower is better)
Translates to: GEGIPSWATVVWSLSLPWQYTKV*LSWIQI
Trigger: TATCTGAATCCAAGACAGCCACACCTTAGTATACTG...CCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACTCATCTTCCTTCACCTaGTCCCAAGAAGTCTTCCGG +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDSSSFT*SQEVFR
Trigger: CCGGAAGACTTCTTGGGACCAGGTGAAGGAAGATGA...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp GGCTGGATTGCAGTTGCTCAATCTCACTGCAACCACCACCTCCTGGGTTCAAGCAAAGTGATGATACACTaGGCTTTTGCCTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: GWIAVAQSHCNHHLLGSSKVMIH*AFAFCA
Trigger: AGCACAAAAGGCAAAAGCCCAGTGTATCATCACTTT...GCTTGAACCCAGGAGGTGGTGGTTGCAGTGAGATTGAGCAACTGCAATCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCGTTTTCCTCCTCACTTaGGATACTTCTGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVVFLLT*DTSGCS
Trigger: GGAGCACCCAGAAGTATCTCAAGTGAGGAGGAAAAC...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACAAAGGTTCTTTGAGGTaGTTTTCGGGGATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDKGSLR*FSGISG
Trigger: GCCAGAGATCCCCGAAAATCACCTCAAAGAACCTTT...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCAGTGTGCTCTGGCAGTaGTGGAACCCTAGGAAATTG +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVSVLWQ*WNPRKL
Trigger: CAATTTCCTAGGGTTCCATCACTGCCAGAGCACACT...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGACAAGAAGTATTTTGGTaGGGTTCCCAGGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRQEVFW*GSQAVR
Trigger: TCTCACTGCCTGGGAACCTCACCAAAATACTTCTTG...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCCTCAGTTTCTCCAACTaGTTGTGTTCTGCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVLSFSN*LCSAGV
Trigger: GACTCCGGCAGAACACAAGCAGTTGGAGAAACTGAG...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp TCCCTTCATTTCAAATACCAAAATGTTGCAGTAGGAGGGCAAAGGTTGAGACGAAAGGGGTTGATGAGCTaGTCTGCCACCTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLHFKYQNVAVGGQRLRRKGLMS*SATFSQ
Trigger: CTGGCTGAAGGTGGCAGAGCAGCTCATCAACCCCTT...TCGTCTCAACCTTTGCCCTCCTACTGCAACATTTTGGTATTTGAAATGAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAAGCCAACAGGGACACCTaGAAATTCCTGTCGACAATC +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEANRDT*KFLSTI
Trigger: GATTGTCGACAGGAATTTGCAGGTGTCCCTGTTGGC...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAAACGTTCTGTTTGGCTaGCTTGTGGTTTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRNVLFG*LVVFGQ
Trigger: CTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTT...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp CGTGAAAGTAACTGCTTGAGAATCCAGAAAAGGGAAGTTACACTTCCTCCCACGTGTCATCCAGCTGACTaGCACCTCATGGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: RESNCLRIQKREVTLPPTCHPAD*HLMVLG
Trigger: ACCCAAAACCATGAGGTGGCAGTCAGCTGGATGACA...CGTGGGAGGAAGTGTAACTTCCCTTTTCTGGATTCTCAAGCAGTTACTTTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACCAAATACCAAAATGTTaGAGTAGGAGGGCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHQIPKC*SRRAKV
Trigger: AACCTTTGCCCTCCTACTGCAACATTTTGGTATTTG...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATCTGCCTTGTGGTTTTTaGGCAGGCCCTCGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYLPCGF*AGPRGE
Trigger: TTCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAG...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATTGTTTGGCTGCCTTGTaGTTTTTGGGCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYCLAAL*FLGRPS
Trigger: CGAGGGCCTGCCCAAAAACCACAAGGCAGCCAAACA...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp CCATTAGGAAGCAGGTTAGGAATGTGCTTCATCCCTGTTTTCCAAGGCCCAATAGCCTTGTTGTCTTCCTaGCCCCTAACGTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: PLGSRLGMCFIPVFQGPIALLSS*PLTFCL
Trigger: CAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGC...TATTGGGCCTTGGAAAACAGGGATGAAGCACATTCCTAACCTGCTTCCTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CCA 90 bp GGTGTCATACTTCATCATCTGGCAGTGTTCGGGTATCAGAAATCACTTAAACTAGGCACTGTAGTAGCCTaGCCTCTGATACAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GVILHHLAVFGYQKSLKLGTVVA*PLIQWG
Trigger: GCCCCACTGTATCAGAGGCCAGGCTACTACAGTGCC...TAGTTTAAGTGATTTCTGATACCCGAACACTGCCAGATGATGAAGTATGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTCAGTATACTAAGGTGTaGCTGTCTTGGATTCAGATA +
Preference number: 4 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSQYTKV*LSWIQI
Trigger: TATCTGAATCCAAGACAGCCACACCTTAGTATACTG...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAGGGGTTTCATCATGTTaGCCAGGTTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRGVSSC*PGWSQT
Trigger: AGTTTGAGACCAACCTGGCCAACATGATGAAACCCC...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp TCCCTTCATTTCAAATACCAAAATGTTGCAGTAGGAGGGCAAAGGTTGAGACGAATGCCTGTGACACTGTaGAGCTTTGACGGCGCTGAT +
Preference number: 4 (lower is better)
Translates to: SLHFKYQNVAVGGQRLRRMPVTL*SFDGAD
Trigger: ATCAGCGCCGTCAAAGCTTCACAGTGTCACAGGCAT...TCGTCTCAACCTTTGCCCTCCTACTGCAACATTTTGGTATTTGAAATGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACGTTCCAAAGGTTCTTTaGGGTGATTTTCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDVPKVL*GDFRGS
Trigger: AGATCCCCGAAAATCACCTCAAAGAACCTTTGGAAC...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAGTTCCAAAGGTTCTTTaGGGTGATTTTCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRVPKVL*GDFRGS
Trigger: AGATCCCCGAAAATCACCTCAAAGAACCTTTGGAAC...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp TCCCTTCATTTCAAATACCAAAATGTTGCAGTAGGAGGGCAAAGGTTGAGACGAACAGCTGTATGGCTGTaGCTGGATCAGTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLHFKYQNVAVGGQRLRRTAVWL*LDQCPA
Trigger: AGCAGGACACTGATCCAGTCACAGCCATACAGCTGT...TCGTCTCAACCTTTGCCCTCCTACTGCAACATTTTGGTATTTGAAATGAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAAAGGCATTAAAGGCTaGAGTAGTCTGGGATTTTTA +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHKGIKG*SSLGFL
Trigger: TAAAAATCCCAGACTACTTCAGCCTTTAATGCCTTT...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp TGGCATATCCGTCAGGTTAAACTCCACAGTTTTCCTCCTCACTTGAGATACTTCAAGAAGTCTTCCGGGTaGTACCAGGGTGAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: WHIRQVKLHSFPPHLRYFKKSSG*YQGEVR
Trigger: TCTCACTTCACCCTGGTATCACCCGGAAGACTTCTT...GAAGTATCTCAAGTGAGGAGGAAAACTGTGGAGTTTAACCTGACGGATATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CCA 90 bp GGTGTCATACTTCATCATCTGGCAGTGTTCGGGTATCAGAAATCACTTAAACTATGGCCTCTGATACAGTaGGGCAGACTTGAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: GVILHHLAVFGYQKSLKLWPLIQ*GRLEGV
Trigger: GACGCCTTCAAGTCTGCCCCACTGTATCAGAGGCCA...TAGTTTAAGTGATTTCTGATACCCGAACACTGCCAGATGATGAAGTATGACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGGTTAAATGTTTCCAATaGTTCAGTCTAGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRVKCFQ*FSLAFT
Trigger: TGTGAAAGCTAGACTGAACCATTGGAAACATTTAAC...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp CACTGTGAAGCTTTGACGGCGCTGATGGTTCTAGGGGGAAGAACATGGGAGTGGGTTAAATGTTTCCAATaGTTCAGTCTAGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: HCEALTALMVLGGRTWEWVKCFQ*FSLAFT
Trigger: TGTGAAAGCTAGACTGAACCATTGGAAACATTTAAC...CCACTCCCATGTTCTTCCCCCTAGAACCATCAGCGCCGTCAAAGCTTCACAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CCA 90 bp CAAGGTGAACAAAAGATCCTAGGGGTGTCATACTTCATCATCTGGCAGTGTTCGAACCCTAGGAAATTGTaGAGGAAGGGTAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: QGEQKILGVSYFIIWQCSNPRKL*RKGRLR
Trigger: TCTGAGCCTACCCTTCCTCCACAATTTCCTAGGGTT...CGAACACTGCCAGATGATGAAGTATGACACCCCTAGGATCTTTTGTTCACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGTTTTCCTCCTCACTTaGGATACTTCTGGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYVFLLT*DTSGCS
Trigger: GGAGCACCCAGAAGTATCTCAAGTGAGGAGGAAAAC...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp TCCCTTCATTTCAAATACCAAAATGTTGCAGTAGGAGGGCAAAGGTTGAGACGATCCCTAGGATCCCTGTaGAGGTGGCCAAGTATATAC +
Preference number: 4 (lower is better)
Translates to: SLHFKYQNVAVGGQRLRRSLGSL*RWPSIY
Trigger: GTATATACTTGGCCACCTTCACAGGGATCCTAGGGA...TCGTCTCAACCTTTGCCCTCCTACTGCAACATTTTGGTATTTGAAATGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp TCCCTTCATTTCAAATACCAAAATGTTGCAGTAGGAGGGCAAAGGTTGAGACGACCCAGGTGTTGTCTTTaGGGTCTTGGGATGAATCAG +
Preference number: 4 (lower is better)
Translates to: SLHFKYQNVAVGGQRLRRPRCCL*GLGMNQ
Trigger: CTGATTCATCCCAAGACCTCAAAGACAACACCTGGG...TCGTCTCAACCTTTGCCCTCCTACTGCAACATTTTGGTATTTGAAATGAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCTTCAGGATATCAAGGTaGACAAAAGATCCTAGGGGT +
Preference number: 4 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPFRISR*TKDPRG
Trigger: ACCCCTAGGATCTTTTGTTCACCTTGATATCCTGAA...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGCCAACAGGGACACCTaGAAATTCCTGTCGACAATC +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYANRDT*KFLSTI
Trigger: GATTGTCGACAGGAATTTGCAGGTGTCCCTGTTGGC...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCCTGTGTATACACCAGTaGGATACTAATCCAGTCGTA +
Preference number: 4 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPLCIHQ*DTNPVV
Trigger: TACGACTGGATTAGTATCCCACTGGTGTATACACAG...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACGTTAAATGTTTCCAATaGTTCAGTCTAGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHVKCFQ*FSLAFT
Trigger: TGTGAAAGCTAGACTGAACCATTGGAAACATTTAAC...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGATCATACTTCATCATCTaGCAGTGTTCGGGTATCAGA +
Preference number: 4 (lower is better)
Translates to: VWLSWIQIELRVPDSESRSYFII*QCSGIR
Trigger: TCTGATACCCGAACACTGCCAGATGATGAAGTATGA...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp GGTGTCATACTTCATCATCTGGCAGTGTTCGGGTATCAGAAATCACTTAAACTATACAGGTGTCCACACTaGGTACGCAAGGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: GVILHHLAVFGYQKSLKLYRCPH*VRKVFI
Trigger: GATGAACACCTTGCGTACTCAGTGTGGACACCTGTA...TAGTTTAAGTGATTTCTGATACCCGAACACTGCCAGATGATGAAGTATGACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATAAAGGTTCTTTGAGGTaGTTTTCGGGGATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYKGSLR*FSGISG
Trigger: GCCAGAGATCCCCGAAAATCACCTCAAAGAACCTTT...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGTGTATGTTGGTTGGTaGTTGTTCCAAAGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPVYVGW*LFQRFF
Trigger: AAAGAACCTTTGGAACAATCACCAACCAACATACAC...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp GGTGTCATACTTCATCATCTGGCAGTGTTCGGGTATCAGAAATCACTTAAACTAAAGAAGTCTTCCGGGTaGTACCAGGGTGAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GVILHHLAVFGYQKSLKLKKSSG*YQGEVR
Trigger: TCTCACTTCACCCTGGTATCACCCGGAAGACTTCTT...TAGTTTAAGTGATTTCTGATACCCGAACACTGCCAGATGATGAAGTATGACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp GGTGTCATACTTCATCATCTGGCAGTGTTCGGGTATCAGAAATCACTTAAACTACATCTGTCATCCAGCTaGCTGCCACCTCATGGTTTT +
Preference number: 4 (lower is better)
Translates to: GVILHHLAVFGYQKSLKLHLSSS*LPPHGF
Trigger: AAAACCATGAGGTGGCAGTCAGCTGGATGACAGATG...TAGTTTAAGTGATTTCTGATACCCGAACACTGCCAGATGATGAAGTATGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR GCA 90 bp TCCCTTCATTTCAAATACCAAAATGTTGCAGTAGGAGGGCAAAGGTTGAGACGAAGGCTGGATTGCAGTTaGTCAATCTCACTGCAACCA +
Preference number: 4 (lower is better)
Translates to: SLHFKYQNVAVGGQRLRRRLDCS*SISLQP
Trigger: TGGTTGCAGTGAGATTGAGCAACTGCAATCCAGCCT...TCGTCTCAACCTTTGCCCTCCTACTGCAACATTTTGGTATTTGAAATGAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAACTGTGTATACACCAGTaGGATACTAATCCAGTCGTA +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSELCIHQ*DTNPVV
Trigger: TACGACTGGATTAGTATCCCACTGGTGTATACACAG...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCATTTTCGGGGATCTCTaGCATATCCGTCAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVIFGDL*HIRQVK
Trigger: TTTAACCTGACGGATATGCCAGAGATCCCCGAAAAT...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp GAAATCATTTGCCTTAGGGATTGGGAAAGCTGCCCACTAACTGTCTTCCCCATTATTTTCGGGGATCTCTaGCATATCCGTCAGGTTAAA +
Preference number: 4 (lower is better)
Translates to: EIICLRDWESCPLTVFPIIFGDL*HIRQVK
Trigger: TTTAACCTGACGGATATGCCAGAGATCCCCGAAAAT...AATGGGGAAGACAGTTAGTGGGCAGCTTTCCCAATCCCTAAGGCAAATGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCAAGGTGTGGCTGTCTTaGATTCAGATAGAACTAAGG +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVKVWLS*IQIELR
Trigger: CCTTAGTTCTATCTGAATCCAAGACAGCCACACCTT...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp CAAGGTGAACAAAAGATCCTAGGGGTGTCATACTTCATCATCTGGCAGTGTTCGAAGGTGTGGCTGTCTTaGATTCAGATAGAACTAAGG +
Preference number: 4 (lower is better)
Translates to: QGEQKILGVSYFIIWQCSKVWLS*IQIELR
Trigger: CCTTAGTTCTATCTGAATCCAAGACAGCCACACCTT...CGAACACTGCCAGATGATGAAGTATGACACCCCTAGGATCTTTTGTTCACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCTGGGGTGTTTATAATTaGGTGAAAGTGTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPWGVYN*VKVSRK
Trigger: TTTCCTGGACACTTTCACCCAATTATAAACACCCCA...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR CAA 72 bp ATAATAGCTGCGTGTTCTGACCGTGAAAGTAACTGCTaGAGAATCCAGAAAAGGGAAGTTACACTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: IIAACSDRESNC*RIQKREVTLPP
Trigger: GGGAGGAAGTGTAACTTCCCTTTTCTGGATTCTCAAGCAGTTACTTTCACGGTCAGAACACGCAGCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
3UTR CAA 72 bp CCTTTTGCCAAAACGTGGTGGTTAGAGATGATGGGCTaGCTGACTTCTAGGTTAGTTGGTAGAGATGCATTA +
Preference number: 4 (lower is better)
Translates to: PFAKTWWLEMMG*LTSRLVGRDAL
Trigger: TAATGCATCTCTACCAACTAACCTAGAAGTCAGCAAGCCCATCATCTCTAACCACCACGTTTTGGCAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGTTCCAAAGGTTCTTTaGGGTGATTTTCGGGGATCT +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYVPKVL*GDFRGS
Trigger: AGATCCCCGAAAATCACCTCAAAGAACCTTTGGAAC...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAAGTGTATGTTGGTTGGTaGTTGTTCCAAAGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEVYVGW*LFQRFF
Trigger: AAAGAACCTTTGGAACAATCACCAACCAACATACAC...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR TCA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACAAAGGCATTAAAGGCTaGAGTAGTCTGGGATTTTTA +
Preference number: 4 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDKGIKG*SSLGFL
Trigger: TAAAAATCCCAGACTACTTCAGCCTTTAATGCCTTT...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR GCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGATTCCTTAAGTaGCGTTGTTCAGTTCTAATC +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSESRFLK*RCSVLI
Trigger: GATTAGAACTGAACAACGGCACTTAAGGAATCTGGA...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCCAGTATACTAAGGTGTaGCTGTCTTGGATTCAGATA +
Preference number: 4 (lower is better)
Translates to: GFPTLNPESELNVSNGSVQYTKV*LSWIQI
Trigger: TATCTGAATCCAAGACAGCCACACCTTAGTATACTG...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATTTTGCCAAAACGTGGTaGTTAGAGATGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYFAKTW*LEMMGL
Trigger: CAAGCCCATCATCTCTAACCACCACGTTTTGGCAAA...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR TCA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATTTTGAGGTCTTGGGATaGATCAGAAATCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYFEVLG*IRNLSR
Trigger: CCTGGATAGATTTCTGATTCATCCCAAGACCTCAAA...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAAAAGGCTGAAGTAGTCTaGGATTTTTATCTATTAAGC +
Preference number: 4 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEKAEVV*DFYLLS
Trigger: GCTTAATAGATAAAAATCCCAGACTACTTCAGCCTT...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CCA 90 bp CGTGAAAGTAACTGCTTGAGAATCCAGAAAAGGGAAGTTACACTTCCTCCCACGAAGGCTGAAGTAGTCTaGGATTTTTATCTATTAAGC +
Preference number: 4 (lower is better)
Translates to: RESNCLRIQKREVTLPPTKAEVV*DFYLLS
Trigger: GCTTAATAGATAAAAATCCCAGACTACTTCAGCCTT...CGTGGGAGGAAGTGTAACTTCCCTTTTCTGGATTCTCAAGCAGTTACTTTCACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CCA 90 bp TGGCATATCCGTCAGGTTAAACTCCACAGTTTTCCTCCTCACTTGAGATACTTCAAGGCTGAAGTAGTCTaGGATTTTTATCTATTAAGC +
Preference number: 4 (lower is better)
Translates to: WHIRQVKLHSFPPHLRYFKAEVV*DFYLLS
Trigger: GCTTAATAGATAAAAATCCCAGACTACTTCAGCCTT...GAAGTATCTCAAGTGAGGAGGAAAACTGTGGAGTTTAACCTGACGGATATGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS CCA 90 bp CCTCCTGGAAGGCGCTCGGGAGCGAGAGGCAGGCAGAGCCTCGCATaGAGGCGCGAGAGCCCCAAGGGTTCTGTCACCCGGGGGTCCCCC +
Preference number: 5 (lower is better)
Translates to: PPGRRSGARGRQSLA*RRESPKGSVTRGSP
Trigger: GGGGGACCCCCGGGTGACAGAACCCTTGGGGCTCTCGCGCCTCCATGCGAGGCTCTGCCTGCCTCTCGCTCCCGAGCGCCTTCCAGGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524877.5
ENST00000533521.5
CDS CCA 90 bp CTCCTCCAGCTTTCTGCTGCGAGCGGGCCTAGCCCCCAGCCCTCCTaGAAGGCGCTCGGGAGCGAGAGGCAGGCAGAGCCTCGCATGGAG +
Preference number: 5 (lower is better)
Translates to: LLQLSAASGPSPQPS*KALGSERQAEPRME
Trigger: CTCCATGCGAGGCTCTGCCTGCCTCTCGCTCCCGAGCGCCTTCCAGGAGGGCTGGGGGCTAGGCCCGCTCGCAGCAGAAAGCTGGAGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524877.5
ENST00000533521.5
CDS TCA 90 bp GGCCTTGCTCGTCCTTGCCTTCGACGAAGCCCGACACCAGGCTCATaGGGCGGTCGGGCCACGGCAGGTTCTCGTACTGGTTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: GLARPCLRRSPTPGS*GGRATAGSRTGSTS
Trigger: GCTGGTGGAACCAGTACGAGAACCTGCCGTGGCCCGACCGCCTCATGAGCCTGGTGTCGGGCTTCGTCGAAGGCAAGGACGAGCAAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524877.5
ENST00000524926.5
ENST00000526988.1
ENST00000529265.5
ENST00000533521.5
ENST00000534553.5
CDS CCA 90 bp ACAGAAGGTCTGGCGACTAGGCTGGTGGGACTCCCTGGGACTCTGTaGCCAGTGCCCCTGCCCACTCTTAGAGGCTGGCACTGCCCACGT +
Preference number: 5 (lower is better)
Translates to: TEGLATRLVGLPGTL*PVPLPTLRGWHCPR
Trigger: ACGTGGGCAGTGCCAGCCTCTAAGAGTGGGCAGGGGCACTGGCCACAGAGTCCCAGGGAGTCCCACCAGCCTAGTCGCCAGACCTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS CCA 90 bp TTCCAGGTGGGTCCGATGATCCCACAGAAGGTCTGGCGACTAGGCTaGTGGGACTCCCTGGGACTCTGTGGCCAGTGCCCCTGCCCACTC +
Preference number: 5 (lower is better)
Translates to: FQVGPMIPQKVWRLG*WDSLGLCGQCPCPL
Trigger: GAGTGGGCAGGGGCACTGGCCACAGAGTCCCAGGGAGTCCCACCAGCCTAGTCGCCAGACCTTCTGTGGGATCATCGGACCCACCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CAA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACCGCAGCAGCCGGCCTaGCTCGTCCTTGCCTTCGAC +
Preference number: 5 (lower is better)
Translates to: AANDASVSILLVLLIGLEPQQPA*LVLAFD
Trigger: GTCGAAGGCAAGGACGAGCAAGGCCGGCTGCTGCGG...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR CAA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGCGGCCTTGCTCGTCCTaGCCTTCGACGAAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: EAANDASVSILLVLLIGLRPCSS*PSTKPD
Trigger: GTCGGGCTTCGTCGAAGGCAAGGACGAGCAAGGCCG...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524926.5
ENST00000526988.1
ENST00000534553.5
CDS-3UTR CAA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGCCGCAGCAGCCGGCCTaGCTCGTCCTTGCCTTCGAC +
Preference number: 5 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRPQQPA*LVLAFD
Trigger: GTCGAAGGCAAGGACGAGCAAGGCCGGCTGCTGCGG...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTCCGCAGCAGCCGGCCTaGCTCGTCCTTGCCTTCGAC +
Preference number: 5 (lower is better)
Translates to: ALSFQALLSSWPLTFCLAPQQPA*LVLAFD
Trigger: GTCGAAGGCAAGGACGAGCAAGGCCGGCTGCTGCGG...AGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAAAGTCATAAAGCCTGCTaGCACCAGGTGCTGGGCGCT +
Preference number: 5 (lower is better)
Translates to: AANDASVSILLVLLIGLESHKAC*HQVLGA
Trigger: AGCGCCCAGCACCTGGTGCAAGCAGGCTTTATGACT...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CAA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAAGCCTTCATTGACAGGTaGGCAAACCACACCCAGGGC +
Preference number: 5 (lower is better)
Translates to: AANDASVSILLVLLIGLEAFIDR*ANHTQG
Trigger: GCCCTGGGTGTGGTTTGCCAACCTGTCAATGAAGGC...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS TCA 90 bp GATCCCTCCAGGCCCAGCTCACCTCACTGTTTGTTGATTCCCTCTTaGCCAGAGTTAACATCCAACCCCCGCAACCACCCCGCCTGGCGT +
Preference number: 5 (lower is better)
Translates to: DPSRPSSPHCLLIPS*PELTSNPRNHPAWR
Trigger: ACGCCAGGCGGGGTGGTTGCGGGGGTTGGATGTTAACTCTGGTCAAGAGGGAATCAACAAACAGTGAGGTGAGCTGGGCCTGGAGGGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CCA 90 bp AGTATGGCCTGCCCTTGCCCAAGTTCAGATTCTTCCCATGTTCCATaGCTCAGCTCCAGACCCAGCTGGAAGCCGCCTCCCAGGCAGACA +
Preference number: 5 (lower is better)
Translates to: SMACPCPSSDSSHVP*LSSRPSWKPPPRQT
Trigger: TGTCTGCCTGGGAGGCGGCTTCCAGCTGGGTCTGGAGCTGAGCCATGGAACATGGGAAGAATCTGAACTTGGGCAAGGGCAGGCCATACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS-3UTR CAA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACCTGCAGCAGGTGGGCTaGGGTCAGGTGGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHLQQVG*GQVGFQ
Trigger: CTGGAACCCCACCTGACCCAAGCCCACCTGCTGCAG...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378043.9
ENST00000524926.5
CDS-3UTR CAA 90 bp GCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTCGGCCTTGCTCGTCCTaGCCTTCGACGAAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: ALSFQALLSSWPLTFCLARPCSS*PSTKPD
Trigger: GTCGGGCTTCGTCGAAGGCAAGGACGAGCAAGGCCG...AGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp GCCTGGCCTCTGATACAGTGGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTGCTGCCTTGTGGTTTTaGGGCAGGCCCTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: AWPLIQWGRLEGVHSLKLAALWF*GRPSWR
Trigger: TCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGC...AAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACTGTATCAGAGGCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGTTCTGTTTGGCTGCCTaGTGGTTTTTGGGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: EAANDASVSILLVLLIGLFCLAA*WFLGRP
Trigger: GGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAA...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp TACCCCAAGCCAGTGCTGGGCGTAGGTCCAGTGTGCTCTGGCAGTGATGGAACCTTGGGTCAGCCACCCTaGCTCAAAGTAAGTTGGGGC +
Preference number: 5 (lower is better)
Translates to: YPKPVLGVGPVCSGSDGTLGQPP*LKVSWG
Trigger: GCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAA...GGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGCTTGGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS TCA 90 bp AGCCTGGCCATGGCCCCTCTAATTTCTTCTTGGAGGGTGTTGGGCTaGGACCAGGGCTGGAATTTAGGGCAACACCCCCTCTACCATGGC +
Preference number: 5 (lower is better)
Translates to: SLAMAPLISSWRVLG*DQGWNLGQHPLYHG
Trigger: GCCATGGTAGAGGGGGTGTTGCCCTAAATTCCAGCCCTGGTCTCAGCCCAACACCCTCCAAGAAGAAATTAGAGGGGCCATGGCCAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CAA 90 bp ACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTCAAAACTTCCGCAGCAGCCGGCCTaGCTCGTCCTTGCCTTCGAC +
Preference number: 5 (lower is better)
Translates to: TSGCSIKAPSLSESNSKLPQQPA*LVLAFD
Trigger: GTCGAAGGCAAGGACGAGCAAGGCCGGCTGCTGCGG...AAGTTTTGAATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp GACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCAGTCATAAAGCCTGCTaGCACCAGGTGCTGGGCGCT +
Preference number: 5 (lower is better)
Translates to: DLKASTALSFQALLSSWPSHKAC*HQVLGA
Trigger: AGCGCCCAGCACCTGGTGCAAGCAGGCTTTATGACT...GGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CAA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGGCACCCAGAACATGTaGTGTGGTAGGCTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: EAANDASVSILLVLLIGLGTQNM*CGRLSF
Trigger: GAAACTGAGCCTACCACACAACATGTTCTGGGTGCC...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CAA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACAAGCCACGCCTTCATaGACAGGTTGGCAAACCACA +
Preference number: 5 (lower is better)
Translates to: AANDASVSILLVLLIGLEQATPS*TGWQTT
Trigger: TGTGGTTTGCCAACCTGTCAATGAAGGCGTGGCTTG...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CAA 90 bp TACCCCAAGCCAGTGCTGGGCGTAGGTCCAGTGTGCTCTGGCAGTGATGGAACCTTAAGCTTCCAGGCCTaGTTGTCTTCCTGGCCCCTA +
Preference number: 5 (lower is better)
Translates to: YPKPVLGVGPVCSGSDGTLSFQA*LSSWPL
Trigger: TAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAA...GGTTCCATCACTGCCAGAGCACACTGGACCTACGCCCAGCACTGGCTTGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS CCA 90 bp GACATGTGCCCAACACTCTCCAAGGCACTTTCAACTCTGTTGTCCTaGGGAGAAAGGACCAGCTGGGATAGCCCTTCAGCCCACTGCAGC +
Preference number: 5 (lower is better)
Translates to: DMCPTLSKALSTLLS*GERTSWDSPSAHCS
Trigger: GCTGCAGTGGGCTGAAGGGCTATCCCAGCTGGTCCTTTCTCCCCAGGACAACAGAGTTGAAAGTGCCTTGGAGAGTGTTGGGCACATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS-3UTR CAA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTCGGCCTTGCTCGTCCTaGCCTTCGACGAAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: GFGSATLAQSKLGPVITSRPCSS*PSTKPD
Trigger: GTCGGGCTTCGTCGAAGGCAAGGACGAGCAAGGCCG...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
CDS-3UTR CAA 90 bp GGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGCCTTCATTGACAGGTaGGCAAACCACACCCAGGGC +
Preference number: 5 (lower is better)
Translates to: GEGIPSWATVVWSLSLPWAFIDR*ANHTQG
Trigger: GCCCTGGGTGTGGTTTGCCAACCTGTCAATGAAGGC...CCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CAA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTGCTGCCTTGTGGTTTTaGGGCAGGCCCTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSAALWF*GRPSWR
Trigger: TCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGC...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
CDS-3UTR CAA 90 bp TTCCCTAGGATCCCTGTGAAGGTGGCCAAGTATATACCCCAAGCCAGTGCTGGGAGCTTCCAGGCCTTGTaGTCTTCCTGGCCCCTAACG +
Preference number: 5 (lower is better)
Translates to: FPRIPVKVAKYIPQASAGSFQAL*SSWPLT
Trigger: CGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCT...CCCAGCACTGGCTTGGGGTATATACTTGGCCACCTTCACAGGGATCCTAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CAA 90 bp GAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACTACAGTGGGGCAGACTaGAAGGCGTCCACAGCCTTA +
Preference number: 5 (lower is better)
Translates to: EGVHSLKLPGLVVFLAPNYSGAD*KASTAL
Trigger: TAAGGCTGTGGACGCCTTCAAGTCTGCCCCACTGTA...GTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACCCTCTAATTTCTTCTaGGAGGGTGTTGGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: AANDASVSILLVLLIGLEPSNFF*EGVGLR
Trigger: TCTCAGCCCAACACCCTCCAAGAAGAAATTAGAGGG...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CAA 90 bp AACCTCATCTTCCTTCACCTGGTCCCAAGAAGTCTTCCGGGTGATACCAGGGTGCTTTGTTCAGGCTGCTaGCACCAGGTGCTGGGCGCT +
Preference number: 5 (lower is better)
Translates to: NLIFLHLVPRSLPGDTRVLCSGC*HQVLGA
Trigger: AGCGCCCAGCACCTGGTGCAAGCAGCCTGAACAAAG...CACCCTGGTATCACCCGGAAGACTTCTTGGGACCAGGTGAAGGAAGATGAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS GCA 90 bp TTGTCCTGGGGAGAAAGGACCAGCTGGGATAGCCCTTCAGCCCACTaGAGCTCAAGAGGGATTCAGATGGAATCAGGGAAGTGGGACCAT +
Preference number: 5 (lower is better)
Translates to: LSWGERTSWDSPSAH*SSRGIQMESGKWDH
Trigger: ATGGTCCCACTTCCCTGATTCCATCTGAATCCCTCTTGAGCTGCAGTGGGCTGAAGGGCTATCCCAGCTGGTCCTTTCTCCCCAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CCA 90 bp CTTTGTTCAGGCTGGAAAGAAACAGGAGATGCAGGGCTGAGCCAGTaGACAAAGGACCAACACCTGGCCTTACTTCTCCCTTACCCCCGC +
Preference number: 5 (lower is better)
Translates to: LCSGWKETGDAGLSQ*TKDQHLALLLPYPR
Trigger: GCGGGGGTAAGGGAGAAGTAAGGCCAGGTGTTGGTCCTTTGTCCACTGGCTCAGCCCTGCATCTCCTGTTTCTTTCCAGCCTGAACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS-3UTR CAA 90 bp CAAGGTGAACAAAAGATCCTAGGGGTGTCATACTTCATCATCTGGCAGTGTTCGCCGCAGCAGCCGGCCTaGCTCGTCCTTGCCTTCGAC +
Preference number: 5 (lower is better)
Translates to: QGEQKILGVSYFIIWQCSPQQPA*LVLAFD
Trigger: GTCGAAGGCAAGGACGAGCAAGGCCGGCTGCTGCGG...CGAACACTGCCAGATGATGAAGTATGACACCCCTAGGATCTTTTGTTCACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp GCCTGGCCTCTGATACAGTGGGGCAGACTTGAAGGCGTCCACAGCCTTAAGCTTCAAGCCACGCCTTCATaGACAGGTTGGCAAACCACA +
Preference number: 5 (lower is better)
Translates to: AWPLIQWGRLEGVHSLKLQATPS*TGWQTT
Trigger: TGTGGTTTGCCAACCTGTCAATGAAGGCGTGGCTTG...AAGCTTAAGGCTGTGGACGCCTTCAAGTCTGCCCCACTGTATCAGAGGCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CAA 90 bp GAAGCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGTTGTTCAGGCTGATGTaGAAGGTGGAGCCCATAAAG +
Preference number: 5 (lower is better)
Translates to: EAANDASVSILLVLLIGLLFRLM*KVEPIK
Trigger: CTTTATGGGCTCCACCTTCAACATCAGCCTGAACAA...CAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CAA 90 bp GACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCAGAAGGGATTCCCTCTaGGGCCACAGTAGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: DLKASTALSFQALLSSWPRRDSL*GHSSLV
Trigger: GACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCT...GGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp GTGTGCTCTGGCAGTGATGGAACCCTAGGAAATTGTGGAGGAAGGGTAGGCTCATGCCACCTCATGGTTTaGGGTCAGCCACCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: VCSGSDGTLGNCGGRVGSCHLMV*GQPPLL
Trigger: GAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCA...TGAGCCTACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS CCA 90 bp TCCAAGGCACTTTCAACTCTGTTGTCCTGGGGAGAAAGGACCAGCTaGGATAGCCCTTCAGCCCACTGCAGCTCAAGAGGGATTCAGATG +
Preference number: 5 (lower is better)
Translates to: SKALSTLLSWGERTS*DSPSAHCSSRGIQM
Trigger: CATCTGAATCCCTCTTGAGCTGCAGTGGGCTGAAGGGCTATCCCAGCTGGTCCTTTCTCCCCAGGACAACAGAGTTGAAAGTGCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS-3UTR CAA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCCTGCAGCAGGTGGGCTaGGGTCAGGTGGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: GFPTLNPESELNVSNGSVLQQVG*GQVGFQ
Trigger: CTGGAACCCCACCTGACCCAAGCCCACCTGCTGCAG...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378043.9
ENST00000524926.5
CDS-3UTR CAA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAACGGCCTTGCTCGTCCTaGCCTTCGACGAAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: TKVWLSWIQIELRVPDSERPCSS*PSTKPD
Trigger: GTCGGGCTTCGTCGAAGGCAAGGACGAGCAAGGCCG...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCCGGCCTTGCTCGTCCTaGCCTTCGACGAAGCCCGAC +
Preference number: 5 (lower is better)
Translates to: GFPTLNPESELNVSNGSVRPCSS*PSTKPD
Trigger: GTCGGGCTTCGTCGAAGGCAAGGACGAGCAAGGCCG...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCAGTTTCTCCAACTGCTaGTGTTCTGCCGGAGTCATA +
Preference number: 5 (lower is better)
Translates to: ANDASVSILLVLLIGLELSFSNC*CSAGVI
Trigger: TATGACTCCGGCAGAACACAAGCAGTTGGAGAAACT...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CAA 90 bp GCGGCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAAAACTCCATCTCCTCTTaGTTCAGGCTGATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: AANDASVSILLVLLIGLENSISS*FRLMLK
Trigger: CTTCAACATCAGCCTGAACAAAGAGGAGATGGAGTT...TTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CAA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGTTGGGCCACAGTAGTTaGGTCCTTGAGTTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRLGHSS*VLEFAL
Trigger: CAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAA...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GGCTGGATTGCAGTTGCTCAATCTCACTGCAACCACCACCTCCTGGGTTCAAGCTTGGGCCACAGTAGTTaGGTCCTTGAGTTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: GWIAVAQSHCNHHLLGSSLGHSS*VLEFAL
Trigger: CAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAA...GCTTGAACCCAGGAGGTGGTGGTTGCAGTGAGATTGAGCAACTGCAATCCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp CACTGTGAAGCTTTGACGGCGCTGATGGTTCTAGGGGGAAGAACATGGGAGTGGTTGGGCCACAGTAGTTaGGTCCTTGAGTTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: HCEALTALMVLGGRTWEWLGHSS*VLEFAL
Trigger: CAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAA...CCACTCCCATGTTCTTCCCCCTAGAACCATCAGCGCCGTCAAAGCTTCACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp GAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACCCCCTAACGTTCTGTTaGGCTGCCTTGTGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: EGVHSLKLPGLVVFLAPNPLTFC*AALWFL
Trigger: CAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGG...GTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS TCA 90 bp TCAGCTCCAGACCCAGCTGGAAGCCGCCTCCCAGGCAGACAAAGATaGCTGTGTTCCATGTTCTGTCCCTTTTCTGGACATCCAGTACTT +
Preference number: 5 (lower is better)
Translates to: SAPDPAGSRLPGRQR*LCSMFCPFSGHPVL
Trigger: AAGTACTGGATGTCCAGAAAAGGGACAGAACATGGAACACAGTCATCTTTGTCTGCCTGGGAGGCGGCTTCCAGCTGGGTCTGGAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CCA 90 bp AGTTCAGATTCTTCCCATGTTCCATGGCTCAGCTCCAGACCCAGCTaGAAGCCGCCTCCCAGGCAGACAAAGATGACTGTGTTCCATGTT +
Preference number: 5 (lower is better)
Translates to: SSDSSHVPWLSSRPS*KPPPRQTKMTVFHV
Trigger: AACATGGAACACAGTCATCTTTGTCTGCCTGGGAGGCGGCTTCCAGCTGGGTCTGGAGCTGAGCCATGGAACATGGGAAGAATCTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS-3UTR CAA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACGCGGGCATTAGCCACTaGGCTTGTGTAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHAGISH*ACVSDG
Trigger: ACCATCACTTACACAAGCCAAGTGGCTAATGCCCGC...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378043.9
ENST00000524926.5
CDS-3UTR CAA 90 bp GACTTGAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCAGTTTCTCCAACTGCTaGTGTTCTGCCGGAGTCATA +
Preference number: 5 (lower is better)
Translates to: DLKASTALSFQALLSSWPSFSNC*CSAGVI
Trigger: TATGACTCCGGCAGAACACAAGCAGTTGGAGAAACT...GGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CAA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACGGCACCCAGAACATGTaGTGTGGTAGGCTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHGTQNM*CGRLSF
Trigger: GAAACTGAGCCTACCACACAACATGTTCTGGGTGCC...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GACCTGGCTGGCGAAGCATCCCCATTAGGAAGCAGGTTAGGAATGTGCTTCATCGGCACCCAGAACATGTaGTGTGGTAGGCTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: DLAGEASPLGSRLGMCFIGTQNM*CGRLSF
Trigger: GAAACTGAGCCTACCACACAACATGTTCTGGGTGCC...GATGAAGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGACAGTAGTTTGGTCCTaGAGTTTGCCCTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRTVVWS*SLPWED
Trigger: ATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGT...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GACACCCTCAACCTCACCATCTACCAGTTCCTAGGAGTGAGGCAGTTCCTGCCAACAGTAGTTTGGTCCTaGAGTTTGCCCTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: DTLNLTIYQFLGVRQFLPTVVWS*SLPWED
Trigger: ATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGT...TGGCAGGAACTGCCTCACTCCTAGGAACTGGTAGATGGTGAGGTTGAGGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp ACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTCAAAACTTAGCTTCCAGGCCTTGTaGTCTTCCTGGCCCCTAACG +
Preference number: 5 (lower is better)
Translates to: TSGCSIKAPSLSESNSKLSFQAL*SSWPLT
Trigger: CGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCT...AAGTTTTGAATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACTTAAGCTTCCAGGCCTaGTTGTCTTCCTGGCCCCTA +
Preference number: 5 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHLSFQA*LSSWPL
Trigger: TAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAA...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTTAAGCTTCCAGGCCTaGTTGTCTTCCTGGCCCCTA +
Preference number: 5 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSLSFQA*LSSWPL
Trigger: TAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAA...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
CDS-3UTR CAA 90 bp AACCTCATCTTCCTTCACCTGGTCCCAAGAAGTCTTCCGGGTGATACCAGGGTGTGGAACCCTAGGAAATaGTGGAGGAAGGGTAGGCTC +
Preference number: 5 (lower is better)
Translates to: NLIFLHLVPRSLPGDTRVWNPRK*WRKGRL
Trigger: GAGCCTACCCTTCCTCCACAATTTCCTAGGGTTCCA...CACCCTGGTATCACCCGGAAGACTTCTTGGGACCAGGTGAAGGAAGATGAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CAA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTACAGGCCACAGATGTTaGCCAAGTTCCTGTCTAGCC +
Preference number: 5 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSTGHRC*PSSCLA
Trigger: GGCTAGACAGGAACTTGGCAAACATCTGTGGCCTGT...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCCCTCCTGTGATCCACTaGCCTCCACACCCAGCCCAA +
Preference number: 5 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPPPVIH*PPHPAQ
Trigger: TTGGGCTGGGTGTGGAGGCAAGTGGATCACAGGAGG...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp CCAGCTGACTGCCACCTCATGGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTCAGGCTGGATTGCAGTaGCTCAATCTCACTGCAACC +
Preference number: 5 (lower is better)
Translates to: PADCHLMVLGQPPLLKVSQAGLQ*LNLTAT
Trigger: GGTTGCAGTGAGATTGAGCAACTGCAATCCAGCCTG...ACTTACTTTGAGCAAGGGTGGCTGACCCAAAACCATGAGGTGGCAGTCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS TCA 90 bp TCGGAGTATTGGCTGTGGTGGGAGGGAATACCTGGACAAGCCACTTaGGGTGAGGAACAAGACAGCCCAACAGGCATCTTGAATAAGGAG +
Preference number: 5 (lower is better)
Translates to: SEYWLWWEGIPGQAT*GEEQDSPTGILNKE
Trigger: CTCCTTATTCAAGATGCCTGTTGGGCTGTCTTGTTCCTCACCTCAAGTGGCTTGTCCAGGTATTCCCTCCCACCACAGCCAATACTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524877.5
ENST00000529265.5
CDS TCA 90 bp CATCTCCTCTTTGTTCAGGCTGGAAAGAAACAGGAGATGCAGGGCTaGGCCAGTGGACAAAGGACCAACACCTGGCCTTACTTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: HLLFVQAGKKQEMQG*ASGQRTNTWPYFSL
Trigger: AAGGGAGAAGTAAGGCCAGGTGTTGGTCCTTTGTCCACTGGCTCAGCCCTGCATCTCCTGTTTCTTTCCAGCCTGAACAAAGAGGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS GCA 90 bp ACCCTGCAAGGGAAAGCTTATCTACCAGAGAGTATGGCCTGCCCTTaGCCAAGTTCAGATTCTTCCCATGTTCCATGGCTCAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TLQGKAYLPESMACP*PSSDSSHVPWLSSR
Trigger: TCTGGAGCTGAGCCATGGAACATGGGAAGAATCTGAACTTGGGCAAGGGCAGGCCATACTCTCTGGTAGATAAGCTTTCCCTTGCAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CCA 90 bp CCCAGACCTTTACCCTGCAAGGGAAAGCTTATCTACCAGAGAGTATaGCCTGCCCTTGCCCAAGTTCAGATTCTTCCCATGTTCCATGGC +
Preference number: 5 (lower is better)
Translates to: PRPLPCKGKLIYQRV*PALAQVQILPMFHG
Trigger: GCCATGGAACATGGGAAGAATCTGAACTTGGGCAAGGGCAGGCCATACTCTCTGGTAGATAAGCTTTCCCTTGCAGGGTAAAGGTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS-3UTR CAA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACAGTCATAAAGCCTGCTaGCACCAGGTGCTGGGCGCT +
Preference number: 5 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDSHKAC*HQVLGA
Trigger: AGCGCCCAGCACCTGGTGCAAGCAGGCTTTATGACT...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACGCCTTCATTGACAGGTaGGCAAACCACACCCAGGGC +
Preference number: 5 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDAFIDR*ANHTQG
Trigger: GCCCTGGGTGTGGTTTGCCAACCTGTCAATGAAGGC...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GCCAATGATGCCAGCGTGAGCATCCTCCTCGTCCTCCTGATTGGGCTGGAACTCCTGTCGACAATCCAGTaGGTCTCAAAATCATCATCA +
Preference number: 5 (lower is better)
Translates to: ANDASVSILLVLLIGLELLSTIQ*VSKSSS
Trigger: TGATGATGATTTTGAGACCAACTGGATTGTCGACAG...GAGTTCCAGCCCAATCAGGAGGACGAGGAGGATGCTCACGCTGGCATCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000526988.1
CDS-3UTR CAA 90 bp GAAGGCGTCCACAGCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACAACTCCATCTCCTCTTaGTTCAGGCTGATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: EGVHSLKLPGLVVFLAPNNSISS*FRLMLK
Trigger: CTTCAACATCAGCCTGAACAAAGAGGAGATGGAGTT...GTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGCTGTGGACGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CAA 90 bp GCCTTAAGCTTCCAGGCCTTGTTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTACAGTAGTTTGGTCCTaGAGTTTGCCCTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: ALSFQALLSSWPLTFCLATVVWS*SLPWED
Trigger: ATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGT...AGCCAAACAGAACGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp CGTGAAAGTAACTGCTTGAGAATCCAGAAAAGGGAAGTTACACTTCCTCCCACGGCTGCCTTGTGGTTTTaGGGCAGGCCCTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: RESNCLRIQKREVTLPPTAALWF*GRPSWR
Trigger: TCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGC...CGTGGGAGGAAGTGTAACTTCCCTTTTCTGGATTCTCAAGCAGTTACTTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp GTGTGCTCTGGCAGTGATGGAACCCTAGGAAATTGTGGAGGAAGGGTAGGCTCACCCCTAACGTTCTGTTaGGCTGCCTTGTGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: VCSGSDGTLGNCGGRVGSPLTFC*AALWFL
Trigger: CAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGG...TGAGCCTACCCTTCCTCCACAATTTCCTAGGGTTCCATCACTGCCAGAGCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CAA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACAGCTTCCAGGCCTTGTaGTCTTCCTGGCCCCTAACG +
Preference number: 5 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDSFQAL*SSWPLT
Trigger: CGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCT...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGGAAGCAAGAAGTATTTaGGTGAGGTTCCCAGGCAGT +
Preference number: 5 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHREARSI*VRFPGS
Trigger: ACTGCCTGGGAACCTCACCAAAATACTTCTTGCTTC...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAACCTCAACCTCCTGCGTaGGGACTACAGGCACACCAC +
Preference number: 5 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEPQPPA*GLQAHH
Trigger: GTGGTGTGCCTGTAGTCCCAACGCAGGAGGTTGAGG...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp TTGTCTTCCTGGCCCCTAACGTTCTGTTTGGCTGCCTTGTGGTTTTTGGGCAGGAACTCCATCTCCTCTTaGTTCAGGCTGCTTGCACCA +
Preference number: 5 (lower is better)
Translates to: LSSWPLTFCLAALWFLGRNSISS*FRLLAP
Trigger: TGGTGCAAGCAGCCTGAACAAAGAGGAGATGGAGTT...CCTGCCCAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGGCCAGGAAGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS TCA 90 bp GAACAGCCAGAAGGGGGAACTCACCCAGCACGAAGGAAATGGGGATaGGCTGGATGTAGCTGTCGCAATACAGAGTCAGTTTCTCAAACA +
Preference number: 5 (lower is better)
Translates to: EQPEGGTHPARRKWG*AGCSCRNTESVSQT
Trigger: TGTTTGAGAAACTGACTCTGTATTGCGACAGCTACATCCAGCTCATCCCCATTTCCTTCGTGCTGGGTGAGTTCCCCCTTCTGGCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524877.5
ENST00000533521.5
CDS GCA 90 bp CACTGGATACCGTGGAAGAAACCCTTGAGTATGAACCCTGACATGTaGCCAACACTCTCCAAGGCACTTTCAACTCTGTTGTCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: HWIPWKKPLSMNPDM*PTLSKALSTLLSWG
Trigger: TCCCCAGGACAACAGAGTTGAAAGTGCCTTGGAGAGTGTTGGGCACATGTCAGGGTTCATACTCAAGGGTTTCTTCCACGGTATCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS GCA 90 bp ACCTTTACCCTGCAAGGGAAAGCTTATCTACCAGAGAGTATGGCCTaGCCTTGCCCAAGTTCAGATTCTTCCCATGTTCCATGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: TFTLQGKAYLPESMA*PCPSSDSSHVPWLS
Trigger: GCTGAGCCATGGAACATGGGAAGAATCTGAACTTGGGCAAGGGCAGGCCATACTCTCTGGTAGATAAGCTTTCCCTTGCAGGGTAAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS-3UTR CAA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCAGTCATAAAGCCTGCTaGCACCAGGTGCTGGGCGCT +
Preference number: 5 (lower is better)
Translates to: GFPTLNPESELNVSNGSVSHKAC*HQVLGA
Trigger: AGCGCCCAGCACCTGGTGCAAGCAGGCTTTATGACT...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTGGCACCCAGAACATGTaGTGTGGTAGGCTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: GFGSATLAQSKLGPVITSGTQNM*CGRLSF
Trigger: GAAACTGAGCCTACCACACAACATGTTCTGGGTGCC...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAAGCCTTCATTGACAGGTaGGCAAACCACACCCAGGGC +
Preference number: 5 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEAFIDR*ANHTQG
Trigger: GCCCTGGGTGTGGTTTGCCAACCTGTCAATGAAGGC...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GGCTGGATTGCAGTTGCTCAATCTCACTGCAACCACCACCTCCTGGGTTCAAGCAACTCCATCTCCTCTTaGTTCAGGCTGATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GWIAVAQSHCNHHLLGSSNSISS*FRLMLK
Trigger: CTTCAACATCAGCCTGAACAAAGAGGAGATGGAGTT...GCTTGAACCCAGGAGGTGGTGGTTGCAGTGAGATTGAGCAACTGCAATCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGATTCTGTTTGGCTGCCTaGTGGTTTTTGGGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VWLSWIQIELRVPDSESRFCLAA*WFLGRP
Trigger: GGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAA...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAAAGCTTCCAGGCCTTGTaGTCTTCCTGGCCCCTAACG +
Preference number: 5 (lower is better)
Translates to: TKVWLSWIQIELRVPDSESFQAL*SSWPLT
Trigger: CGTTAGGGGCCAGGAAGACAACAAGGCCTGGAAGCT...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp ACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTCAAAACTTTTAAGCTTCCAGGCCTaGTTGTCTTCCTGGCCCCTA +
Preference number: 5 (lower is better)
Translates to: TSGCSIKAPSLSESNSKLLSFQA*LSSWPL
Trigger: TAGGGGCCAGGAAGACAACAAGGCCTGGAAGCTTAA...AAGTTTTGAATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp GGTTTTGGGTCAGCCACCCTTGCTCAAAGTAAGTTGGGGCCAGTGATAACATCTTGGAACCCTAGGAAATaGTGGAGGAAGGGTAGGCTC +
Preference number: 5 (lower is better)
Translates to: GFGSATLAQSKLGPVITSWNPRK*WRKGRL
Trigger: GAGCCTACCCTTCCTCCACAATTTCCTAGGGTTCCA...AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000449131.6
ENST00000534553.5
CDS-3UTR CAA 90 bp GTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGGCTTGCTCAAAGTAAGTaGGGGCCAGTGATAACATCT +
Preference number: 5 (lower is better)
Translates to: VDSCMAVTGSVSCWCTHRLAQSK*GPVITS
Trigger: AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAG...CCTGTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp GGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATCTTGCTCAAAGTAAGTaGGGGCCAGTGATAACATCT +
Preference number: 5 (lower is better)
Translates to: GIPSWATVVWSLSLPWEDLAQSK*GPVITS
Trigger: AGATGTTATCACTGGCCCCAACTTACTTTGAGCAAG...ATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS-3UTR CAA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACGCGGGCATTAGCCACTaGGCTTGTGTAAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDAGISH*ACVSDG
Trigger: ACCATCACTTACACAAGCCAAGTGGCTAATGCCCGC...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378043.9
ENST00000524926.5
CDS-3UTR CAA 90 bp GGAGAAGGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGCTGTCGACAATCCAGTaGGTCTCAAAATCATCATCA +
Preference number: 5 (lower is better)
Translates to: GEGIPSWATVVWSLSLPWLSTIQ*VSKSSS
Trigger: TGATGATGATTTTGAGACCAACTGGATTGTCGACAG...CCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524926.5
CDS-3UTR CAA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGCTGCCTTGTGGTTTTaGGGCAGGCCCTCGTGGAGA +
Preference number: 5 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYAALWF*GRPSWR
Trigger: TCTCCACGAGGGCCTGCCCAAAAACCACAAGGCAGC...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCTACAGTGGGGCAGACTaGAAGGCGTCCACAGCCTTA +
Preference number: 5 (lower is better)
Translates to: GFPTLNPESELNVSNGSVYSGAD*KASTAL
Trigger: TAAGGCTGTGGACGCCTTCAAGTCTGCCCCACTGTA...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp CAAGGTGAACAAAAGATCCTAGGGGTGTCATACTTCATCATCTGGCAGTGTTCGTACAGTGGGGCAGACTaGAAGGCGTCCACAGCCTTA +
Preference number: 5 (lower is better)
Translates to: QGEQKILGVSYFIIWQCSYSGAD*KASTAL
Trigger: TAAGGCTGTGGACGCCTTCAAGTCTGCCCCACTGTA...CGAACACTGCCAGATGATGAAGTATGACACCCCTAGGATCTTTTGTTCACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS TCA 90 bp GTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCACAGTaGCAGGAAGGGCAGAGACAGAGACTTACACCCCCATTACCAAAA +
Preference number: 5 (lower is better)
Translates to: VCMCVCVCVCVCVSQ*QEGQRQRLTPPLPK
Trigger: TTTTGGTAATGGGGGTGTAAGTCTCTGTCTCTGCCCTTCCTGTCACTGTGACACACACACACACACACACACACACACACACATACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524877.5
ENST00000529265.5
CDS TCA 90 bp AGAACAGCACTGGATACCGTGGAAGAAACCCTTGAGTATGAACCCTaGCATGTGCCCAACACTCTCCAAGGCACTTTCAACTCTGTTGTC +
Preference number: 5 (lower is better)
Translates to: RTALDTVEETLEYEP*HVPNTLQGTFNSVV
Trigger: GACAACAGAGTTGAAAGTGCCTTGGAGAGTGTTGGGCACATGTCAGGGTTCATACTCAAGGGTTTCTTCCACGGTATCCAGTGCTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS TCA 90 bp GGTACAGACCATGTAGGGCTCAAAGTCATCCTCCAGAAATGTTTCTaGCCTAAGCAAGCCTCCAGCCTTCATTTGATCACCTTCCCAACC +
Preference number: 5 (lower is better)
Translates to: GTDHVGLKVILQKCF*PKQASSLHLITFPT
Trigger: GGTTGGGAAGGTGATCAAATGAAGGCTGGAGGCTTGCTTAGGTCAGAAACATTTCTGGAGGATGACTTTGAGCCCTACATGGTCTGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS-3UTR CAA 90 bp GGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGTCCAAGCCACGCCTTCATaGACAGGTTGGCAAACCACA +
Preference number: 5 (lower is better)
Translates to: GFPTLNPESELNVSNGSVQATPS*TGWQTT
Trigger: TGTGGTTTGCCAACCTGTCAATGAAGGCGTGGCTTG...GACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACACAGTAGTTTGGTCCTaGAGTTTGCCCTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDTVVWS*SLPWED
Trigger: ATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGT...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACCCCCTAACGTTCTGTTaGGCTGCCTTGTGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDPLTFC*AALWFL
Trigger: CAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGG...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp TGGCATATCCGTCAGGTTAAACTCCACAGTTTTCCTCCTCACTTGAGATACTTCTACAGTGGGGCAGACTaGAAGGCGTCCACAGCCTTA +
Preference number: 5 (lower is better)
Translates to: WHIRQVKLHSFPPHLRYFYSGAD*KASTAL
Trigger: TAAGGCTGTGGACGCCTTCAAGTCTGCCCCACTGTA...GAAGTATCTCAAGTGAGGAGGAAAACTGTGGAGTTTAACCTGACGGATATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp GGGATTCCCTCTTGGGCCACAGTAGTTTGGTCCTTGAGTTTGCCCTGGGAGGATAGTGTAGTGTGTATGTaGGTTGGTGATTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: GIPSWATVVWSLSLPWEDSVVCM*VGDCSK
Trigger: TTTGGAACAATCACCAACCAACATACACACTACACT...ATCCTCCCAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAAGAGGGAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp GGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCAGTTTCTCCAACTGCTaGTGTTCTGCCGGAGTCATA +
Preference number: 5 (lower is better)
Translates to: GQYTKVWLSWIQIELRVPSFSNC*CSAGVI
Trigger: TATGACTCCGGCAGAACACAAGCAGTTGGAGAAACT...GGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGTATACTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAAGTTTCTCCAACTGCTaGTGTTCTGCCGGAGTCATA +
Preference number: 5 (lower is better)
Translates to: VWLSWIQIELRVPDSESRSFSNC*CSAGVI
Trigger: TATGACTCCGGCAGAACACAAGCAGTTGGAGAAACT...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp ATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATGGCTGTGACTTGTTCAGGCTGATGTaGAAGGTGGAGCCCATAAAG +
Preference number: 5 (lower is better)
Translates to: IQAVVGHVLQCGQLYGCDLFRLM*KVEPIK
Trigger: CTTTATGGGCTCCACCTTCAACATCAGCCTGAACAA...GTCACAGCCATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGATTGTTCAGGCTGATGTaGAAGGTGGAGCCCATAAAG +
Preference number: 5 (lower is better)
Translates to: VWLSWIQIELRVPDSESRLFRLM*KVEPIK
Trigger: CTTTATGGGCTCCACCTTCAACATCAGCCTGAACAA...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp TGGCATATCCGTCAGGTTAAACTCCACAGTTTTCCTCCTCACTTGAGATACTTCTTGGGCCACAGTAGTTaGGTCCTTGAGTTTGCCCTG +
Preference number: 5 (lower is better)
Translates to: WHIRQVKLHSFPPHLRYFLGHSS*VLEFAL
Trigger: CAGGGCAAACTCAAGGACCAAACTACTGTGGCCCAA...GAAGTATCTCAAGTGAGGAGGAAAACTGTGGAGTTTAACCTGACGGATATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS-3UTR CAA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATTTCTGTTTGGCTGCCTaGTGGTTTTTGGGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYFCLAA*WFLGRP
Trigger: GGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAA...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GAAATCATTTGCCTTAGGGATTGGGAAAGCTGCCCACTAACTGTCTTCCCCATTCCCCTAACGTTCTGTTaGGCTGCCTTGTGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: EIICLRDWESCPLTVFPIPLTFC*AALWFL
Trigger: CAAAAACCACAAGGCAGCCAAACAGAACGTTAGGGG...AATGGGGAAGACAGTTAGTGGGCAGCTTTCCCAATCCCTAAGGCAAATGATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp AGTGTGGACAGCTGTATGGCTGTGACTGGATCAGTGTCCTGCTGGTGTACACACAGTGTAGTGTGTATGTaGGTTGGTGATTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: SVDSCMAVTGSVSCWCTHSVVCM*VGDCSK
Trigger: TTTGGAACAATCACCAACCAACATACACACTACACT...GTGTGTACACCAGCAGGACACTGATCCAGTCACAGCCATACAGCTGTCCACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATTTGGGTCAGCCACCCTaGCTCAAAGTAAGTTGGGGC +
Preference number: 5 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYLGQPP*LKVSWG
Trigger: GCCCCAACTTACTTTGAGCAAGGGTGGCTGACCCAA...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATCTCAAACATCAGCTGTaGTTCTTCCGTGAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYLKHQL*FFREGQ
Trigger: CTGGCCCTCACGGAAGAACAACAGCTGATGTTTGAG...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAAACTCCATCTCCTCTTaGTTCAGGCTGATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: VWLSWIQIELRVPDSESRNSISS*FRLMLK
Trigger: CTTCAACATCAGCCTGAACAAAGAGGAGATGGAGTT...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp AACCATTTGATTCAGGCTGTTGTAGGACATGTTCTTCAGTGTGGACAGCTGTATAGAAGGGATTCCCTCTaGGGCCACAGTAGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: NHLIQAVVGHVLQCGQLYRRDSL*GHSSLV
Trigger: GACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCT...ATACAGCTGTCCACACTGAAGAACATGTCCTACAACAGCCTGAATCAAATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GGTGTCATACTTCATCATCTGGCAGTGTTCGGGTATCAGAAATCACTTAAACTATTCTGTTTGGCTGCCTaGTGGTTTTTGGGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GVILHHLAVFGYQKSLKLFCLAA*WFLGRP
Trigger: GGGCCTGCCCAAAAACCACAAGGCAGCCAAACAGAA...TAGTTTAAGTGATTTCTGATACCCGAACACTGCCAGATGATGAAGTATGACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS TCA 90 bp TCCTCCAGAAATGTTTCTGACCTAAGCAAGCCTCCAGCCTTCATTTaGTCACCTTCCCAACCCTTCCTCACACTATCTATAGACTGTAGT +
Preference number: 5 (lower is better)
Translates to: SSRNVSDLSKPPAFI*SPSQPFLTLSIDCS
Trigger: ACTACAGTCTATAGATAGTGTGAGGAAGGGTTGGGAAGGTGATCAAATGAAGGCTGGAGGCTTGCTTAGGTCAGAAACATTTCTGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS TCA 90 bp TCCCTTTTCTGGACATCCAGTACTTTGTACCTTGTATCCAGAGTTTaGGGCTTGGGTTTGAGCTCCCTCCATAAATTGTGCATTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SLFWTSSTLYLVSRV*GLGLSSLHKLCIPW
Trigger: CCAAGGAATGCACAATTTATGGAGGGAGCTCAAACCCAAGCCTCAAACTCTGGATACAAGGTACAAAGTACTGGATGTCCAGAAAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS-3UTR CAA 90 bp GGTGTCATACTTCATCATCTGGCAGTGTTCGGGTATCAGAAATCACTTAAACTAAGAAGGGATTCCCTCTaGGGCCACAGTAGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: GVILHHLAVFGYQKSLKLRRDSL*GHSSLV
Trigger: GACCAAACTACTGTGGCCCAAGAGGGAATCCCTTCT...TAGTTTAAGTGATTTCTGATACCCGAACACTGCCAGATGATGAAGTATGACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp ACTTCTGGGTGCTCCATCAAGGCCCCATCGCTCTCTGAGAGCAATTCAAAACTTAGTGTAGTGTGTATGTaGGTTGGTGATTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: TSGCSIKAPSLSESNSKLSVVCM*VGDCSK
Trigger: TTTGGAACAATCACCAACCAACATACACACTACACT...AAGTTTTGAATTGCTCTCAGAGAGCGATGGGGCCTTGATGGAGCACCCAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524926.5
ENST00000534553.5
CDS TCA 90 bp CATCCAGTACTTTGTACCTTGTATCCAGAGTTTGAGGCTTGGGTTTaGGCTCCCTCCATAAATTGTGCATTCCTTGGAGACAAGGTCTAT +
Preference number: 5 (lower is better)
Translates to: HPVLCTLYPEFEAWV*APSINCAFLGDKVY
Trigger: ATAGACCTTGTCTCCAAGGAATGCACAATTTATGGAGGGAGCTCAAACCCAAGCCTCAAACTCTGGATACAAGGTACAAAGTACTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS-3UTR CAA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAACTGTCGACAATCCAGTaGGTCTCAAAATCATCATCA +
Preference number: 5 (lower is better)
Translates to: TKVWLSWIQIELRVPDSELSTIQ*VSKSSS
Trigger: TGATGATGATTTTGAGACCAACTGGATTGTCGACAG...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp GTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAAGTGTAGTGTGTATGTaGGTTGGTGATTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: VWLSWIQIELRVPDSESRSVVCM*VGDCSK
Trigger: TTTGGAACAATCACCAACCAACATACACACTACACT...TCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
CDS-3UTR CAA 90 bp ACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAACCCATTGTTTTGCAGTaGTGTGACTTCATTGAGACA +
Preference number: 5 (lower is better)
Translates to: TKVWLSWIQIELRVPDSEPIVLQ*CDFIET
Trigger: TGTCTCAATGAAGTCACACAACTGCAAAACAATGGG...TTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACCTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp CGTGAAAGTAACTGCTTGAGAATCCAGAAAAGGGAAGTTACACTTCCTCCCACGTTAGAGATGATGGGCTaGCTGACTTCTAGGTTAGTT +
Preference number: 5 (lower is better)
Translates to: RESNCLRIQKREVTLPPTLEMMG*LTSRLV
Trigger: AACTAACCTAGAAGTCAGCAAGCCCATCATCTCTAA...CGTGGGAGGAAGTGTAACTTCCCTTTTCTGGATTCTCAAGCAGTTACTTTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS-3UTR CAA 90 bp TCCCTTCATTTCAAATACCAAAATGTTGCAGTAGGAGGGCAAAGGTTGAGACGACTGTCGACAATCCAGTaGGTCTCAAAATCATCATCA +
Preference number: 5 (lower is better)
Translates to: SLHFKYQNVAVGGQRLRRLSTIQ*VSKSSS
Trigger: TGATGATGATTTTGAGACCAACTGGATTGTCGACAG...TCGTCTCAACCTTTGCCCTCCTACTGCAACATTTTGGTATTTGAAATGAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449131.6
CDS CCA 72 bp AGGCGCTCGGGAGCGAGAGGCAGGCAGAGCCTCGCATaGAGGCGCGAGAGCCCCAAGGGTTCTGTCACCCGG +
Preference number: 6 (lower is better)
Translates to: RRSGARGRQSLA*RRESPKGSVTR
Trigger: CCGGGTGACAGAACCCTTGGGGCTCTCGCGCCTCCATGCGAGGCTCTGCCTGCCTCTCGCTCCCGAGCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524877.5
ENST00000533521.5
CDS CCA 72 bp CTTTCTGCTGCGAGCGGGCCTAGCCCCCAGCCCTCCTaGAAGGCGCTCGGGAGCGAGAGGCAGGCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: LSAASGPSPQPS*KALGSERQAEP
Trigger: AGGCTCTGCCTGCCTCTCGCTCCCGAGCGCCTTCCAGGAGGGCTGGGGGCTAGGCCCGCTCGCAGCAGAAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524877.5
ENST00000533521.5
CDS CAA 72 bp ATGAGCGTGCGCCGCAGCAGCCGGCCTTGCTCGTCCTaGCCTTCGACGAAGCCCGACACCAGGCTCATGAGG +
Preference number: 6 (lower is better)
Translates to: MSVRRSSRPCSS*PSTKPDTRLMR
Trigger: CCTCATGAGCCTGGTGTCGGGCTTCGTCGAAGGCAAGGACGAGCAAGGCCGGCTGCTGCGGCGCACGCTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524877.5
ENST00000524926.5
ENST00000526988.1
ENST00000529265.5
ENST00000533521.5
ENST00000534553.5
CDS TCA 72 bp CGTCCTTGCCTTCGACGAAGCCCGACACCAGGCTCATaGGGCGGTCGGGCCACGGCAGGTTCTCGTACTGGT +
Preference number: 6 (lower is better)
Translates to: RPCLRRSPTPGS*GGRATAGSRTG
Trigger: ACCAGTACGAGAACCTGCCGTGGCCCGACCGCCTCATGAGCCTGGTGTCGGGCTTCGTCGAAGGCAAGGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524877.5
ENST00000524926.5
ENST00000526988.1
ENST00000529265.5
ENST00000533521.5
ENST00000534553.5
CDS CCA 72 bp GGTCCGATGATCCCACAGAAGGTCTGGCGACTAGGCTaGTGGGACTCCCTGGGACTCTGTGGCCAGTGCCCC +
Preference number: 6 (lower is better)
Translates to: GPMIPQKVWRLG*WDSLGLCGQCP
Trigger: GGGGCACTGGCCACAGAGTCCCAGGGAGTCCCACCAGCCTAGTCGCCAGACCTTCTGTGGGATCATCGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS CCA 72 bp GGGTTCCAGGTGGGTCCGATGATCCCACAGAAGGTCTaGCGACTAGGCTGGTGGGACTCCCTGGGACTCTGT +
Preference number: 6 (lower is better)
Translates to: GFQVGPMIPQKV*RLGWWDSLGLC
Trigger: ACAGAGTCCCAGGGAGTCCCACCAGCCTAGTCGCCAGACCTTCTGTGGGATCATCGGACCCACCTGGAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378043.9
ENST00000534553.5
CDS CCA 72 bp AATTCAGGAGGTACCTGTGATGGCCTGGCTGCCTGCTaGGACTTTGCTGCCCCTCCCCCATCCCAGGGAACC +
Preference number: 6 (lower is better)
Translates to: NSGGTCDGLAAC*DFAAPPPSQGT
Trigger: GGTTCCCTGGGATGGGGGAGGGGCAGCAAAGTCCCAGCAGGCAGCCAGGCCATCACAGGTACCTCCTGAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS TCA 72 bp GCCTGGCTGCTTTCTACCCGTGAGACCTTCCTTTCCTaGCACTGCATCCTCGTCTCAGGCAGCTGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: AWLLSTRETFLS*HCILVSGSCWP
Trigger: TGGCCAGCAGCTGCCTGAGACGAGGATGCAGTGTCAGGAAAGGAAGGTCTCACGGGTAGAAAGCAGCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000524877.5
ENST00000524926.5
ENST00000526988.1
ENST00000529265.5
CDS CCA 72 bp TCTTCCCATGTTCCATGGCTCAGCTCCAGACCCAGCTaGAAGCCGCCTCCCAGGCAGACAAAGATGACTGTG +
Preference number: 6 (lower is better)
Translates to: SSHVPWLSSRPS*KPPPRQTKMTV
Trigger: CACAGTCATCTTTGTCTGCCTGGGAGGCGGCTTCCAGCTGGGTCTGGAGCTGAGCCATGGAACATGGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS TCA 72 bp TACTCGGTAGGACAAAGTCAATTCAGGAGGTACCTGTaGTGGCCTGGCTGCCTGCTGGGACTTTGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: YSVGQSQFRRYL*WPGCLLGLCCP
Trigger: GGGGCAGCAAAGTCCCAGCAGGCAGCCAGGCCATCACAGGTACCTCCTGAATTGACTTTGTCCTACCGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CCA 72 bp CTTTCAACTCTGTTGTCCTGGGGAGAAAGGACCAGCTaGGATAGCCCTTCAGCCCACTGCAGCTCAAGAGGG +
Preference number: 6 (lower is better)
Translates to: LSTLLSWGERTS*DSPSAHCSSRG
Trigger: CCCTCTTGAGCTGCAGTGGGCTGAAGGGCTATCCCAGCTGGTCCTTTCTCCCCAGGACAACAGAGTTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CAA 90 bp AAGCAACGGCTAGCACAGCCTGGCCATGGCCCCTCTAATTTCTTCTaGGAGGGTGTTGGGCTGAGACCAGGGCTGGAATTTAGGGCAACA +
Preference number: 6 (lower is better)
Translates to: KQRLAQPGHGPSNFF*EGVGLRPGLEFRAT
Trigger: TGTTGCCCTAAATTCCAGCCCTGGTCTCAGCCCAACACCCTCCAAGAAGAAATTAGAGGGGCCATGGCCAGGCTGTGCTAGCCGTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS TCA 72 bp TGGCTGTGGTGGGAGGGAATACCTGGACAAGCCACTTaGGGTGAGGAACAAGACAGCCCAACAGGCATCTTG +
Preference number: 6 (lower is better)
Translates to: WLWWEGIPGQAT*GEEQDSPTGIL
Trigger: CAAGATGCCTGTTGGGCTGTCTTGTTCCTCACCTCAAGTGGCTTGTCCAGGTATTCCCTCCCACCACAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524877.5
ENST00000529265.5
CDS TCA 72 bp AGGCCCAGCTCACCTCACTGTTTGTTGATTCCCTCTTaGCCAGAGTTAACATCCAACCCCCGCAACCACCCC +
Preference number: 6 (lower is better)
Translates to: RPSSPHCLLIPS*PELTSNPRNHP
Trigger: GGGGTGGTTGCGGGGGTTGGATGTTAACTCTGGTCAAGAGGGAATCAACAAACAGTGAGGTGAGCTGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS TCA 72 bp ATGGCCCCTCTAATTTCTTCTTGGAGGGTGTTGGGCTaGGACCAGGGCTGGAATTTAGGGCAACACCCCCTC +
Preference number: 6 (lower is better)
Translates to: MAPLISSWRVLG*DQGWNLGQHPL
Trigger: GAGGGGGTGTTGCCCTAAATTCCAGCCCTGGTCTCAGCCCAACACCCTCCAAGAAGAAATTAGAGGGGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS GCA 72 bp GGAGAAAGGACCAGCTGGGATAGCCCTTCAGCCCACTaGAGCTCAAGAGGGATTCAGATGGAATCAGGGAAG +
Preference number: 6 (lower is better)
Translates to: GERTSWDSPSAH*SSRGIQMESGK
Trigger: CTTCCCTGATTCCATCTGAATCCCTCTTGAGCTGCAGTGGGCTGAAGGGCTATCCCAGCTGGTCCTTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS GCA 72 bp GTAAAACCCCTCACTCCAGGCAGTCAGAAACACTGGTaGCCTGGCATGAGTGGTTCAGATGAGGCCCATGAG +
Preference number: 6 (lower is better)
Translates to: VKPLTPGSQKHW*PGMSGSDEAHE
Trigger: CTCATGGGCCTCATCTGAACCACTCATGCCAGGGCACCAGTGTTTCTGACTGCCTGGAGTGAGGGGTTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CCA 72 bp CCAACACTCTCCAAGGCACTTTCAACTCTGTTGTCCTaGGGAGAAAGGACCAGCTGGGATAGCCCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: PTLSKALSTLLS*GERTSWDSPSA
Trigger: GGCTGAAGGGCTATCCCAGCTGGTCCTTTCTCCCCAGGACAACAGAGTTGAAAGTGCCTTGGAGAGTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CCA 72 bp CCTGTAAAACCCCTCACTCCAGGCAGTCAGAAACACTaGTGCCCTGGCATGAGTGGTTCAGATGAGGCCCAT +
Preference number: 6 (lower is better)
Translates to: PVKPLTPGSQKH*CPGMSGSDEAH
Trigger: ATGGGCCTCATCTGAACCACTCATGCCAGGGCACCAGTGTTTCTGACTGCCTGGAGTGAGGGGTTTTACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CAA 72 bp CAGGCCCAGCTCACCTCACTGTTTGTTGATTCCCTCTaGACCAGAGTTAACATCCAACCCCCGCAACCACCC +
Preference number: 6 (lower is better)
Translates to: QAQLTSLFVDSL*TRVNIQPPQPP
Trigger: GGGTGGTTGCGGGGGTTGGATGTTAACTCTGGTCAAGAGGGAATCAACAAACAGTGAGGTGAGCTGGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CAA 72 bp CTAGCACAGCCTGGCCATGGCCCCTCTAATTTCTTCTaGGAGGGTGTTGGGCTGAGACCAGGGCTGGAATTT +
Preference number: 6 (lower is better)
Translates to: LAQPGHGPSNFF*EGVGLRPGLEF
Trigger: AAATTCCAGCCCTGGTCTCAGCCCAACACCCTCCAAGAAGAAATTAGAGGGGCCATGGCCAGGCTGTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS CAA 90 bp GATGTAGCTGTCGCAATACAGAGTCAGTTTCTCAAACATCAGCTGTaGTTCTTCCGTGAGGGCCAGCAGGTGGGGTTCCAGGTGGGTCCG +
Preference number: 6 (lower is better)
Translates to: DVAVAIQSQFLKHQL*FFREGQQVGFQVGP
Trigger: CGGACCCACCTGGAACCCCACCTGCTGGCCCTCACGGAAGAACAACAGCTGATGTTTGAGAAACTGACTCTGTATTGCGACAGCTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000449131.6
ENST00000524877.5
ENST00000529265.5
ENST00000534553.5
CDS TCA 72 bp CCTTTAAACCTCAGCTGCTGCTATTTCCACACCCCATaGCGCCCTTCCTGCCTGACCACTGTCTTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: PLNLSCCYFHTP*RPSCLTTVFKG
Trigger: GCCTTTGAAGACAGTGGTCAGGCAGGAAGGGCGTCATGGGGTGTGGAAATAGCAGCAGCTGAGGTTTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS TCA 72 bp GCGTCACGTAGAAGCCCAGCACGAAGGAAATGGGGATaGGCTGGATGTAGCTGTCGCAATACAGAGTCAGTT +
Preference number: 6 (lower is better)
Translates to: ASRRSPARRKWG*AGCSCRNTESV
Trigger: AACTGACTCTGTATTGCGACAGCTACATCCAGCTCATCCCCATTTCCTTCGTGCTGGGCTTCTACGTGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524926.5
ENST00000529265.5
CDS TCA 72 bp GAAGGGGGAACTCACCCAGCACGAAGGAAATGGGGATaGGCTGGATGTAGCTGTCGCAATACAGAGTCAGTT +
Preference number: 6 (lower is better)
Translates to: EGGTHPARRKWG*AGCSCRNTESV
Trigger: AACTGACTCTGTATTGCGACAGCTACATCCAGCTCATCCCCATTTCCTTCGTGCTGGGTGAGTTCCCCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524877.5
ENST00000533521.5
CDS TCA 72 bp AGTCCGCACCTTTCCCCAGCACGAAGGAAATGGGGATaGGCTGGATGTAGCTGTCGCAATACAGAGTCAGTT +
Preference number: 6 (lower is better)
Translates to: SPHLSPARRKWG*AGCSCRNTESV
Trigger: AACTGACTCTGTATTGCGACAGCTACATCCAGCTCATCCCCATTTCCTTCGTGCTGGGGAAAGGTGCGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534553.5
CDS CCA 72 bp GTACACCGCCACAGTCACCACCTGTGTATACACCAGTaGGATACTAATCCAGTCGTAGGCATACAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: VHRHSHHLCIHQ*DTNPVVGIQVS
Trigger: GGACACCTGTATGCCTACGACTGGATTAGTATCCCACTGGTGTATACACAGGTGGTGACTGTGGCGGTGTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000378043.9
ENST00000449131.6
ENST00000524877.5
ENST00000524926.5
ENST00000526988.1
ENST00000529265.5
CDS CAA 90 bp TACCCTGCAAGGGAAAGCTTATCTACCAGAGAGTATGGCCTGCCCTaGCCCAAGTTCAGATTCTTCCCATGTTCCATGGCTCAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: YPARESLSTREYGLP*PKFRFFPCSMAQLQ
Trigger: CTGGAGCTGAGCCATGGAACATGGGAAGAATCTGAACTTGGGCAAGGGCAGGCCATACTCTCTGGTAGATAAGCTTTCCCTTGCAGGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS GCA 72 bp GGGAAAGCTTATCTACCAGAGAGTATGGCCTGCCCTTaGCCAAGTTCAGATTCTTCCCATGTTCCATGGCTC +
Preference number: 6 (lower is better)
Translates to: GKAYLPESMACP*PSSDSSHVPWL
Trigger: GAGCCATGGAACATGGGAAGAATCTGAACTTGGGCAAGGGCAGGCCATACTCTCTGGTAGATAAGCTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CAA 72 bp AAGCGAGAACAGCACTGGATACCGTGGAAGAAACCCTaGAGTATGAACCCTGACATGTGCCCAACACTCTCC +
Preference number: 6 (lower is better)
Translates to: KREQHWIPWKKP*SMNPDMCPTLS
Trigger: GGAGAGTGTTGGGCACATGTCAGGGTTCATACTCAAGGGTTTCTTCCACGGTATCCAGTGCTGTTCTCGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS TCA 72 bp CTGGATACCGTGGAAGAAACCCTTGAGTATGAACCCTaGCATGTGCCCAACACTCTCCAAGGCACTTTCAAC +
Preference number: 6 (lower is better)
Translates to: LDTVEETLEYEP*HVPNTLQGTFN
Trigger: GTTGAAAGTGCCTTGGAGAGTGTTGGGCACATGTCAGGGTTCATACTCAAGGGTTTCTTCCACGGTATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS GCA 72 bp CCGTGGAAGAAACCCTTGAGTATGAACCCTGACATGTaGCCAACACTCTCCAAGGCACTTTCAACTCTGTTG +
Preference number: 6 (lower is better)
Translates to: PWKKPLSMNPDM*PTLSKALSTLL
Trigger: CAACAGAGTTGAAAGTGCCTTGGAGAGTGTTGGGCACATGTCAGGGTTCATACTCAAGGGTTTCTTCCACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS GCA 72 bp CTGCAAGGGAAAGCTTATCTACCAGAGAGTATGGCCTaGCCTTGCCCAAGTTCAGATTCTTCCCATGTTCCA +
Preference number: 6 (lower is better)
Translates to: LQGKAYLPESMA*PCPSSDSSHVP
Trigger: TGGAACATGGGAAGAATCTGAACTTGGGCAAGGGCAGGCCATACTCTCTGGTAGATAAGCTTTCCCTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CCA 72 bp TTACCCTGCAAGGGAAAGCTTATCTACCAGAGAGTATaGCCTGCCCTTGCCCAAGTTCAGATTCTTCCCATG +
Preference number: 6 (lower is better)
Translates to: LPCKGKLIYQRV*PALAQVQILPM
Trigger: CATGGGAAGAATCTGAACTTGGGCAAGGGCAGGCCATACTCTCTGGTAGATAAGCTTTCCCTTGCAGGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CAA 72 bp AGGGAAAGCTTATCTACCAGAGAGTATGGCCTGCCCTaGCCCAAGTTCAGATTCTTCCCATGTTCCATGGCT +
Preference number: 6 (lower is better)
Translates to: RESLSTREYGLP*PKFRFFPCSMA
Trigger: AGCCATGGAACATGGGAAGAATCTGAACTTGGGCAAGGGCAGGCCATACTCTCTGGTAGATAAGCTTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS GCA 72 bp ACAGCTGTCCCTGAGTGTATCACTCGGCTGAGTCACTaGCTTTATCTCACCTCATGTATCTTACCTGGAGTT +
Preference number: 6 (lower is better)
Translates to: TAVPECITRLSH*LYLTSCILPGV
Trigger: AACTCCAGGTAAGATACATGAGGTGAGATAAAGGCAGTGACTCAGCCGAGTGATACACTCAGGGACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CCA 72 bp GAAAACTGTGTGATTCAGAACATCTGTTCGGAGTATTaGCTGTGGTGGGAGGGAATACCTGGACAAGCCACT +
Preference number: 6 (lower is better)
Translates to: ENCVIQNICSEY*LWWEGIPGQAT
Trigger: AGTGGCTTGTCCAGGTATTCCCTCCCACCACAGCCAATACTCCGAACAGATGTTCTGAATCACACAGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524877.5
ENST00000529265.5
CDS CAA 72 bp AGAAAACTGTGTGATTCAGAACATCTGTTCGGAGTATaGGCTGTGGTGGGAGGGAATACCTGGACAAGCCAC +
Preference number: 6 (lower is better)
Translates to: RKLCDSEHLFGV*AVVGGNTWTSH
Trigger: GTGGCTTGTCCAGGTATTCCCTCCCACCACAGCCAATACTCCGAACAGATGTTCTGAATCACACAGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524877.5
ENST00000529265.5
CDS TCA 72 bp TCATTCATGCAACAGAGATATATACTGAAGCTGGGCTaGACTAAAGGGCAGTCTAGGTGGGCAGATTCCTGG +
Preference number: 6 (lower is better)
Translates to: SFMQQRYILKLG*TKGQSRWADSW
Trigger: CCAGGAATCTGCCCACCTAGACTGCCCTTTAGTTCAGCCCAGCTTCAGTATATATCTCTGTTGCATGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS TCA 72 bp CATGTAGGGCTCAAAGTCATCCTCCAGAAATGTTTCTaGCCTAAGCAAGCCTCCAGCCTTCATTTGATCACC +
Preference number: 6 (lower is better)
Translates to: HVGLKVILQKCF*PKQASSLHLIT
Trigger: GGTGATCAAATGAAGGCTGGAGGCTTGCTTAGGTCAGAAACATTTCTGGAGGATGACTTTGAGCCCTACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS TCA 72 bp TGGACATCCAGTACTTTGTACCTTGTATCCAGAGTTTaGGGCTTGGGTTTGAGCTCCCTCCATAAATTGTGC +
Preference number: 6 (lower is better)
Translates to: WTSSTLYLVSRV*GLGLSSLHKLC
Trigger: GCACAATTTATGGAGGGAGCTCAAACCCAAGCCTCAAACTCTGGATACAAGGTACAAAGTACTGGATGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5
CDS CAA 90 bp GATGTAGCTGTCGCAATACAGAGTCAGTTTCTCAAACATCAGCTGTaGTTCTTCCGTGAGGGCCAGCCTATAAATAAAGCGGATGATGTA +
Preference number: 6 (lower is better)
Translates to: DVAVAIQSQFLKHQL*FFREGQPINKADDV
Trigger: TACATCATCCGCTTTATTTATAGGCTGGCCCTCACGGAAGAACAACAGCTGATGTTTGAGAAACTGACTCTGTATTGCGACAGCTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378043.9
ENST00000524926.5
ENST00000533521.5
CDS TCA 72 bp GTTTATAAAGAGCATAGTACAGTGCCTGACACTTACTaGAGCAACCTGTATGCATTAACTAGTGCTATTCTA +
Preference number: 6 (lower is better)
Translates to: VYKEHSTVPDTY*SNLYALTSAIL
Trigger: TAGAATAGCACTAGTTAATGCATACAGGTTGCTTCAGTAAGTGTCAGGCACTGTACTATGCTCTTTATAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524877.5