RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BEND4 (Homo sapiens)

Ensembl gene IDs: ENSG00000188848

Ensembl transcript IDs: ENST00000502486.6, ENST00000504360.5, ENST00000611697.1

Found 741 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGTCCCCACCGCCCGCCCCTGTCGGGCGTGACCGACAGCGTCGCTaGACACTTTGTTTATCTGCTCTTCCGAGGGCATCCACCAATCGG +
Preference number: 1 (lower is better)
Translates to: KSPPPAPVGRDRQRR*TLCLSALPRASTNR
Trigger: CCGATTGGTGGATGCCCTCGGAAGAGCAGATAAACAAAGTGTTCAGCGACGCTGTCGGTCACGCCCGACAGGGGCGGGCGGTGGGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR TCA 90 bp CCACCGTTGTGCAGGAAAGTCCCCACCGCCCGCCCCTGTCGGGCGTaGCCGACAGCGTCGCTGAACACTTTGTTTATCTGCTCTTCCGAG +
Preference number: 1 (lower is better)
Translates to: PPLCRKVPTARPCRA*PTASLNTLFICSSE
Trigger: CTCGGAAGAGCAGATAAACAAAGTGTTCAGCGACGCTGTCGGTCACGCCCGACAGGGGCGGGCGGTGGGGACTTTCCTGCACAACGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR CCA 90 bp CCCGCCCTTGCAGCAGTGGTGCAGGTGCGTTGTCATGTACGGCCATaGAGCAGGGGTGCAGAAAGTGCTCTCATCAGCCTCAGCGAAGAC +
Preference number: 1 (lower is better)
Translates to: PALAAVVQVRCHVRP*SRGAESALISLSED
Trigger: GTCTTCGCTGAGGCTGATGAGAGCACTTTCTGCACCCCTGCTCCATGGCCGTACATGACAACGCACCTGCACCACTGCTGCAAGGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 90 bp GCAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTaGTGCTGTATCACGGCCTCAGTGGCGGCTAGTGCCTGCGTCAGA +
Preference number: 1 (lower is better)
Translates to: AVWICPKERSQQCPQ*CCITASVAASACVR
Trigger: TCTGACGCAGGCACTAGCCGCCACTGAGGCCGTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR GCA 90 bp GCGAGGGAGGAAGAGACCATGTGTAACTTTGGAACAAAAGTGGTGTaGAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACAGC +
Preference number: 1 (lower is better)
Translates to: AREEETMCNFGTKVV*KPGTAAFSGGNSDS
Trigger: GCTGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTGTTCCAAAGTTACACATGGTCTCTTCCTCCCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CCA 90 bp TGGGTGCGAGGGAGGAAGAGACCATGTGTAACTTTGGAACAAAAGTaGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTG +
Preference number: 1 (lower is better)
Translates to: WVRGRKRPCVTLEQK*CANLGQQPSQEVTV
Trigger: CACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTGTTCCAAAGTTACACATGGTCTCTTCCTCCCTCGCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 90 bp GTTGGTCCTGATTTAAACAAGAGGAGACCATGCAGACGACCACCGTaGACTTACGTACATACCAGCCTTAAAGGTGAAGCTCAAGGGGCA +
Preference number: 1 (lower is better)
Translates to: VGPDLNKRRPCRRPP*TYVHTSLKGEAQGA
Trigger: TGCCCCTTGAGCTTCACCTTTAAGGCTGGTATGTACGTAAGTTCACGGTGGTCGTCTGCATGGTCTCCTCTTGTTTAAATCAGGACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 90 bp ATCCAATACATATCATTTGAGGGTCATCCTGAGCCTGGCTGGAACTaGGCTTGGGGCTTCAACTCACTGCGAAAAGCCGGCATGATCTTT +
Preference number: 1 (lower is better)
Translates to: IQYISFEGHPEPGWN*AWGFNSLRKAGMIF
Trigger: AAAGATCATGCCGGCTTTTCGCAGTGAGTTGAAGCCCCAAGCTCAGTTCCAGCCAGGCTCAGGATGACCCTCAAATGATATGTATTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 90 bp CTCCATCTGTTTTCTGAGAGCAACAGAAGGGAGGCAACAAGCCATTaGGAGCGGCAGGGGAATGTAGGAATCATAAACCTACAGATTCGA +
Preference number: 1 (lower is better)
Translates to: LHLFSESNRREATSH*ERQGNVGIINLQIR
Trigger: TCGAATCTGTAGGTTTATGATTCCTACATTCCCCTGCCGCTCTCAATGGCTTGTTGCCTCCCTTCTGTTGCTCTCAGAAAACAGATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR GCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTaGTACAACAGGAAGATTCTGTCCACTAATCCCCAGATCCATCCT +
Preference number: 1 (lower is better)
Translates to: DRNRTFTIGTLERTS*YNRKILSTNPQIHP
Trigger: AGGATGGATCTGGGGATTAGTGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR TCA 90 bp ACCTTCAAGTCTCCAAGGATTTCAACTGAAAGGCTCACAGAGCAATaGCAGCATCCGATCCTAGTGAGTGAGCTTTTAACCTGGCTACAC +
Preference number: 1 (lower is better)
Translates to: TFKSPRISTERLTEQ*QHPILVSELLTWLH
Trigger: GTGTAGCCAGGTTAAAAGCTCACTCACTAGGATCGGATGCTGTCATTGCTCTGTGAGCCTTTCAGTTGAAATCCTTGGAGACTTGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR GCA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTaGTTGCAAAATACTGGTCCCCTCCACAGGCTCCTGACCTACACT +
Preference number: 1 (lower is better)
Translates to: NNAPSRVSEKCDFSN*LQNTGPLHRLLTYT
Trigger: AGTGTAGGTCAGGAGCCTGTGGAGGGGACCAGTATTTTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 90 bp GCTCTCATCAGCCTCAGCGAAGACCAGCACGATAGGGCTCCAAGATaGTATTTGGATATGAAGAAATATTCAGGACTCTCAAACTTCCAG +
Preference number: 1 (lower is better)
Translates to: ALISLSEDQHDRAPR*YLDMKKYSGLSNFQ
Trigger: CTGGAAGTTTGAGAGTCCTGAATATTTCTTCATATCCAAATATCATCTTGGAGCCCTATCGTGCTGGTCTTCGCTGAGGCTGATGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 90 bp ACTTTAGTAACTGCTTGCAAAATACTGGTCCCCTCCACAGGCTCCTaGCCTACACTATCCAATACATATCATTTGAGGGTCATCCTGAGC +
Preference number: 1 (lower is better)
Translates to: TLVTACKILVPSTGS*PTLSNTYHLRVILS
Trigger: GCTCAGGATGACCCTCAAATGATATGTATTGGATAGTGTAGGTCAGGAGCCTGTGGAGGGGACCAGTATTTTGCAAGCAGTTACTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR GCA 90 bp TGTGCGATGCTGAGTATGGAGTCTGTCAGCCTTGTGCAAAAGAGATaGCCAACAATTAGTCTCAACATTCAGAATCTGTGGATGGAGAAA +
Preference number: 1 (lower is better)
Translates to: CAMLSMESVSLVQKR*PTISLNIQNLWMEK
Trigger: TTTCTCCATCCACAGATTCTGAATGTTGAGACTAATTGTTGGGCATCTCTTTTGCACAAGGCTGACAGACTCCATACTCAGCATCGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CCA 90 bp CAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTGGGTACTGTaGCAGCTGAGAATGTGTAGACTATGGCAGAATGACAGGCTTTGG +
Preference number: 1 (lower is better)
Translates to: QTSQTTLKWISIWVL*QLRMCRLWQNDRLW
Trigger: CCAAAGCCTGTCATTCTGCCATAGTCTACACATTCTCAGCTGCCACAGTACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CCA 90 bp TCTGTGGATGGAGAAACAGCTGATAGAGAAATGATTAACCTGGAATaGGTGCGAGGGAGGAAGAGACCATGTGTAACTTTGGAACAAAAG +
Preference number: 1 (lower is better)
Translates to: SVDGETADREMINLE*VRGRKRPCVTLEQK
Trigger: CTTTTGTTCCAAAGTTACACATGGTCTCTTCCTCCCTCGCACCCATTCCAGGTTAATCATTTCTCTATCAGCTGTTTCTCCATCCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 90 bp AAGGAACAATGCAGAATACCCGATCACCCACTAACTCTACAGCCGTaGAGTAGCTACAAATATGTCTCGAATCCCCTACAAAAGGAGATA +
Preference number: 1 (lower is better)
Translates to: KEQCRIPDHPLTLQP*SSYKYVSNPLQKEI
Trigger: TATCTCCTTTTGTAGGGGATTCGAGACATATTTGTAGCTACTTCACGGCTGTAGAGTTAGTGGGTGATCGGGTATTCTGCATTGTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 90 bp AAGATTCTGTCCACTAATCCCCAGATCCATCCTGGGAACTTTTATTaGAGACTTCATCCTGAGAAGCCTGGTGATCGATCCCTTCATAAA +
Preference number: 1 (lower is better)
Translates to: KILSTNPQIHPGNFY*RLHPEKPGDRSLHK
Trigger: TTTATGAAGGGATCGATCACCAGGCTTCTCAGGATGAAGTCTTCAATAAAAGTTCCCAGGATGGATCTGGGGATTAGTGGACAGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR TCA 90 bp TCAGCGAAGACCAGCACGATAGGGCTCCAAGATGATATTTGGATATaGAGAAATATTCAGGACTCTCAAACTTCCAGAAAAACAAGAAGG +
Preference number: 1 (lower is better)
Translates to: SAKTSTIGLQDDIWI*RNIQDSQTSRKTRR
Trigger: CCTTCTTGTTTTTCTGGAAGTTTGAGAGTCCTGAATATTTCTTCATATCCAAATATCATCTTGGAGCCCTATCGTGCTGGTCTTCGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 90 bp AATTTAGTGCCTTCAGAAGTCAAATTAACCAAGCTGGTCATCAGATaGGGGAAGTCTCAACCTCTCAGTGTTAACCTGCAACTGAACATA +
Preference number: 1 (lower is better)
Translates to: NLVPSEVKLTKLVIR*GKSQPLSVNLQLNI
Trigger: TATGTTCAGTTGCAGGTTAACACTGAGAGGTTGAGACTTCCCTCATCTGATGACCAGCTTGGTTAATTTGACTTCTGAAGGCACTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 90 bp GTGCTATTTCTAACATCTAGGAGTTCCCAAAGACTCTCACTTCACTaGGTTCAAATGTTTGCTTTTATCTCCCTGCATTTTTGCACTAGG +
Preference number: 1 (lower is better)
Translates to: VLFLTSRSSQRLSLH*VQMFAFISLHFCTR
Trigger: CCTAGTGCAAAAATGCAGGGAGATAAAAGCAAACATTTGAACTCAGTGAAGTGAGAGTCTTTGGGAACTCCTAGATGTTAGAAATAGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 90 bp GCCTTCTTGATCAACACAGTGGTTTTTAAACAACAGAAAAACAGTTaGCCTGTAATTAATCACTGTCTGCAGATGTTGCCTCTGTTCTCT +
Preference number: 1 (lower is better)
Translates to: AFLINTVVFKQQKNS*PVINHCLQMLPLFS
Trigger: AGAGAACAGAGGCAACATCTGCAGACAGTGATTAATTACAGGTCAACTGTTTTTCTGTTGTTTAAAAACCACTGTGTTGATCAAGAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR GCA 90 bp AAAGACTCTCACTTCACTGAGTTCAAATGTTTGCTTTTATCTCCCTaGATTTTTGCACTAGGAACCTATGGGACAAATGTGAACAAACTC +
Preference number: 1 (lower is better)
Translates to: KDSHFTEFKCLLLSP*IFALGTYGTNVNKL
Trigger: GAGTTTGTTCACATTTGTCCCATAGGTTCCTAGTGCAAAAATGCAGGGAGATAAAAGCAAACATTTGAACTCAGTGAAGTGAGAGTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 90 bp TTTTCATTGTTCTACCCATCACTTTGGCATTGTGTCAACAAAGCCTaGTTTAAGGCTATGGAAACTGCGGATTTATTAACCTACAAAACT +
Preference number: 1 (lower is better)
Translates to: FSLFYPSLWHCVNKA*FKAMETADLLTYKT
Trigger: AGTTTTGTAGGTTAATAAATCCGCAGTTTCCATAGCCTTAAATCAGGCTTTGTTGACACAATGCCAAAGTGATGGGTAGAACAATGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTAATGAGCCACCGTTGTaGAGGAAAGTCCCCACCGCC +
Preference number: 2 (lower is better)
Translates to: MPCSQEVQARTLMALACSNEPPL*RKVPTA
Trigger: GGCGGTGGGGACTTTCCTGCACAACGGTGGCTCATT...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR-3UTR TCA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGCGCCCCTGTCGGGCGTaGCCGACAGCGTCGCTGAAC +
Preference number: 2 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRRPCRA*PTASLN
Trigger: GTTCAGCGACGCTGTCGGTCACGCCCGACAGGGGCG...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR-3UTR CCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGCCGCCCTTGCAGCAGTaGTGCAGGTGCGTTGTCATG +
Preference number: 2 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMPPLQQ*CRCVVM
Trigger: CATGACAACGCACCTGCACCACTGCTGCAAGGGCGG...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTACCCTTGCAGCAGTGGTaGAGGTGCGTTGTCATGTAC +
Preference number: 2 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVPLQQW*RCVVMY
Trigger: GTACATGACAACGCACCTGCACCACTGCTGCAAGGG...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACGGGTACTGTGGCAGCTaGGAATGTGTAGACTATGGC +
Preference number: 2 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHGYCGS*ECVDYG
Trigger: GCCATAGTCTACACATTCTCAGCTGCCACAGTACCC...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 90 bp TGTCTCCACCTTCTCCCATGGGCAGAAACACTACCCCAGCCTACCTaGGGGACTATCTCTGCCCAGGTAGCAGAGTTTGAAGATTTCAGA +
Preference number: 2 (lower is better)
Translates to: CLHLLPWAETLPQPT*GTISAQVAEFEDFR
Trigger: TCTGAAATCTTCAAACTCTGCTACCTGGGCAGAGATAGTCCCCAAGGTAGGCTGGGGTAGTGTTTCTGCCCATGGGAGAAGGTGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAGGGTACTGTGGCAGCTaGGAATGTGTAGACTATGGC +
Preference number: 2 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSGYCGS*ECVDYG
Trigger: GCCATAGTCTACACATTCTCAGCTGCCACAGTACCC...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGGAGCCTGGCTGGAACTaGGCTTGGGGCTTCAACTCA +
Preference number: 2 (lower is better)
Translates to: VARIHLATCTGPIIPRIKEPGWN*AWGFNS
Trigger: TGAGTTGAAGCCCCAAGCTCAGTTCCAGCCAGGCTC...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGAAGCTGGTCATCAGATaGGGGAAGTCTCAACCTCTC +
Preference number: 2 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMKLVIR*GKSQPL
Trigger: GAGAGGTTGAGACTTCCCTCATCTGATGACCAGCTT...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp ACACAACTCCATGTCTCCACCTTCTCCCATGGGCAGAAACACTACCCCAGCCTACTTGAGAGGACCAGCTaGTACAACAGGAAGATTCTG +
Preference number: 2 (lower is better)
Translates to: TQLHVSTFSHGQKHYPSLLERTS*YNRKIL
Trigger: CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAG...TAGGCTGGGGTAGTGTTTCTGCCCATGGGAGAAGGTGGAGACATGGAGTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTAAAGTCTGTTGTAGGTaGCACAGACTTCCCAAACAA +
Preference number: 2 (lower is better)
Translates to: MPCSQEVQARTLMALACSKVCCR*HRLPKQ
Trigger: TTGTTTGGGAAGTCTGTGGCACCTACAACAGACTTT...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTCCCTTGCAGCAGTGGTaGAGGTGCGTTGTCATGTAC +
Preference number: 2 (lower is better)
Translates to: GLPICWVTFSYITPTEVVPLQQW*RCVVMY
Trigger: GTACATGACAACGCACCTGCACCACTGCTGCAAGGG...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTCAAAACACAGGCTGCTaGCCCCCGCCCTTGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCQNTGC*PPPLQQ
Trigger: CTGCTGCAAGGGCGGGGGGCAGCAGCCTGTGTTTTG...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTTCCCCAGATCCATCCTaGGAACTTTTATTGAAGACT +
Preference number: 2 (lower is better)
Translates to: MPCSQEVQARTLMALACSSPDPS*ELLLKT
Trigger: AGTCTTCAATAAAAGTTCCCAGGATGGATCTGGGGA...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR CAA 90 bp ATTAACCTGGAATGGGTGCGAGGGAGGAAGAGACCATGTGTAACTTaGGAACAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: INLEWVRGRKRPCVT*EQKWCANLGQQPSQ
Trigger: CTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTGTTCCAAAGTTACACATGGTCTCTTCCTCCCTCGCACCCATTCCAGGTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTAATCATTGAGCAGATCTaGCAGATGACCACCTCCATA +
Preference number: 2 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVIIEQI*QMTTSI
Trigger: TATGGAGGTGGTCATCTGTCAGATCTGCTCAATGAT...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGTCCGATCCTAGTGAGTaGGCTTTTAACCTGGCTACA +
Preference number: 2 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMSDPSE*AFNLAT
Trigger: TGTAGCCAGGTTAAAAGCTCACTCACTAGGATCGGA...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACACTTTGGAACAAAAGTaGTGTGCAAACCTGGGACAG +
Preference number: 2 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHTLEQK*CANLGQ
Trigger: CTGTCCCAGGTTTGCACACCACTTTTGTTCCAAAGT...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTCTGCTTGCAAAATACTaGTCCCCTCCACAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: GLPICWVTFSYITPTEVVLLAKY*SPPQAP
Trigger: AGGAGCCTGTGGAGGGGACCAGTATTTTGCAAGCAG...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATTGTCAGAATCGCCTTaGAGCTGTGTGTATACAATG +
Preference number: 2 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVLSESP*SCVYTM
Trigger: CATTGTATACACACAGCTTCAAGGCGATTCTGACAA...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGAGGCTCACAGAGCAATaGCAGCATCCGATCCTAGTG +
Preference number: 2 (lower is better)
Translates to: VARIHLATCTGPIIPRIKRLTEQ*QHPILV
Trigger: CACTAGGATCGGATGCTGTCATTGCTCTGTGAGCCT...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTGAGGCAACAAGCCATTaGGAGCGGCAGGGGAATGTA +
Preference number: 2 (lower is better)
Translates to: KTELVILLPMPKAILFLAEATSH*ERQGNV
Trigger: TACATTCCCCTGCCGCTCTCAATGGCTTGTTGCCTC...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGGGAACAAAAGTGGTGTaGAAACCTGGGACAGCAGCC +
Preference number: 2 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRGTKVV*KPGTAA
Trigger: GGCTGCTGTCCCAGGTTTGCACACCACTTTTGTTCC...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATGTATCACGGCCTCAGTaGCGGCTAGTGCCTGCGTCA +
Preference number: 2 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNVSRPQ*RLVPAS
Trigger: TGACGCAGGCACTAGCCGCCACTGAGGCCGTGATAC...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTGCTCAAGGGGCAGTGTaGATATGTCCCAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: KTELVILLPMPKAILFLAAQGAV*ICPKER
Trigger: CCTCTCCTTGGGACATATCCACACTGCCCCTTGAGC...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGCTCTCACCAATTAAGTaGGGGCACAGCTGCATCCTG +
Preference number: 2 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRLSPIK*GHSCIL
Trigger: CAGGATGCAGCTGTGCCCCCACTTAATTGGTGAGAG...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAACTGGCTGTGCGATGCTaGGTATGGAGTCTGTCAGCC +
Preference number: 2 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQLAVRC*VWSLSA
Trigger: GGCTGACAGACTCCATACTCAGCATCGCACAGCCAG...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTGGCACAGCTGCATCCTaGGCTGTTTTAACTCAATCT +
Preference number: 2 (lower is better)
Translates to: GLPICWVTFSYITPTEVVGTAAS*AVLTQS
Trigger: AGATTGAGTTAAAACAGCTCAGGATGCAGCTGTGCC...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCGTCAAGCCAGCCCCGTaGCCTCCTCCTCTCACCAAT +
Preference number: 2 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCVKPAP*PPPLTN
Trigger: ATTGGTGAGAGGAGGAGGTCACGGGGCTGGCTTGAC...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCAATCCTCTTCTTAGCTaGGTACCCTGGGCAGTTTCC +
Preference number: 2 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFNPLLS*VPWAVS
Trigger: GGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATT...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATCCTGGGAACTTTTATTaGAGACTTCATCCTGAGAAG +
Preference number: 2 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHPGNFY*RLHPEK
Trigger: CTTCTCAGGATGAAGTCTTCAATAAAAGTTCCCAGG...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR-3UTR CCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGCAGATGAGGCTATGGTaGTGTTTTTCTTCTAGCGAA +
Preference number: 2 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMQMRLW*CFSSSE
Trigger: TTCGCTAGAAGAAAAACACCACCATAGCCTCATCTG...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp AGCAGAGGAGTTAGAACTGGCTGTGCGATGCTGAGTATGGAGTCTGTCAGCCTTCAGATGAGGCTATGGTaGTGTTTTTCTTCTAGCGAA +
Preference number: 2 (lower is better)
Translates to: SRGVRTGCAMLSMESVSLQMRLW*CFSSSE
Trigger: TTCGCTAGAAGAAAAACACCACCATAGCCTCATCTG...AAGGCTGACAGACTCCATACTCAGCATCGCACAGCCAGTTCTAACTCCTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTAGTGAGCTTTTAACCTaGCTACACAGAGGCCCAATG +
Preference number: 2 (lower is better)
Translates to: GLPICWVTFSYITPTEVVSELLT*LHRGPM
Trigger: CATTGGGCCTCTGTGTAGCCAGGTTAAAAGCTCACT...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 90 bp AATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTaGCAAAATACTGGTCCCCTCCACAGGCTCCTGACCTACACTATC +
Preference number: 2 (lower is better)
Translates to: NAPSRVSEKCDFSNC*QNTGPLHRLLTYTI
Trigger: GATAGTGTAGGTCAGGAGCCTGTGGAGGGGACCAGTATTTTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 90 bp TTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTaGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCACTAATC +
Preference number: 2 (lower is better)
Translates to: LDSQVTGTGHSQLEL*RGPAATTGRFCPLI
Trigger: GATTAGTGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR-3UTR TCA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAACAGCAGTGTCCACAGTaGTGCTGTATCACGGCCTCA +
Preference number: 2 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQQQCPQ*CCITAS
Trigger: TGAGGCCGTGATACAGCATCACTGTGGACACTGCTG...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGTCCGATCCTAGTGAGTaGGCTTTTAACCTGGCTACA +
Preference number: 2 (lower is better)
Translates to: VARIHLATCTGPIIPRIKSDPSE*AFNLAT
Trigger: TGTAGCCAGGTTAAAAGCTCACTCACTAGGATCGGA...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAAGCTCAAGGGGCAGTGTaGATATGTCCCAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQAQGAV*ICPKER
Trigger: CCTCTCCTTGGGACATATCCACACTGCCCCTTGAGC...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCATTCTCAAAACAGGATTaGAATATTAGTGCCCACTAC +
Preference number: 2 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSFSKQD*NISAHY
Trigger: GTAGTGGGCACTAATATTTCAATCCTGTTTTGAGAA...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACATTCTCAAAACAGGATTaGAATATTAGTGCCCACTAC +
Preference number: 2 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTFSKQD*NISAHY
Trigger: GTAGTGGGCACTAATATTTCAATCCTGTTTTGAGAA...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGTTTGGGGTAAACATCTaGTACTGCAAGAATAGTTAC +
Preference number: 2 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMFGVNI*YCKNSY
Trigger: GTAACTATTCTTGCAGTATCAGATGTTTACCCCAAA...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCGCACTCCATGTTGTCTaGTGTCAATTCTTCACTCTC +
Preference number: 2 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFALHVV*CQFFTL
Trigger: GAGAGTGAAGAATTGACATCAGACAACATGGAGTGC...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACAGTCCATTTAGCCCTTTaGTCTACAAAGAATGTAGTA +
Preference number: 2 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTVHLAL*STKNVV
Trigger: TACTACATTCTTTGTAGAGCAAAGGGCTAAATGGAC...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAAGAGGCACGGAGGGGATaGAATGTTTTCATCAAGGAC +
Preference number: 2 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQEARRG*NVFIKD
Trigger: GTCCTTGATGAAAACATTTCATCCCCTCCGTGCCTC...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTATCATTGAGCAGATCTaGCAGATGACCACCTCCATA +
Preference number: 2 (lower is better)
Translates to: KTELVILLPMPKAILFLAIIEQI*QMTTSI
Trigger: TATGGAGGTGGTCATCTGTCAGATCTGCTCAATGAT...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCCGCAGATCTGTACTGTaGAATGACACAGCACTGAAT +
Preference number: 2 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIRRSVL*NDTALN
Trigger: ATTCAGTGCTGTGTCATTTCACAGTACAGATCTGCG...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCGCAGTTAAGTGGTTCTaGACGGGCCCAAATAGTTTT +
Preference number: 2 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIAVKWF*TGPNSF
Trigger: AAAACTATTTGGGCCCGTTCAGAACCACTTAACTGC...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGCACAAACGTGAAAAGTaGATTGAACGTTGGCTACCT +
Preference number: 2 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRHKREK*IERWLP
Trigger: AGGTAGCCAACGTTCAATTCACTTTTCACGTTTGTG...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCCTGAACTCGTCATTCTaGTTCCTATGCCCAAAGCAA +
Preference number: 2 (lower is better)
Translates to: LHHRILRRSSLIQKPGQILNSSF*FLCPKQ
Trigger: TTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAG...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTGTCATGTACGGCCATaGAGCAGGGGTGCAGAAAGT +
Preference number: 2 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCCHVRP*SRGAES
Trigger: ACTTTCTGCACCCCTGCTCCATGGCCGTACATGACA...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATTGGCTCTTCTGCTTATaGACCACACCTAGTCACCGA +
Preference number: 2 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNWLFCL*TTPSHR
Trigger: TCGGTGACTAGGTGTGGTCCATAAGCAGAAGAGCCA...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCTCTGGCCACTTGTACTaGCCCAATTATTCCAAGAAT +
Preference number: 2 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFSGHLY*PNYSKN
Trigger: ATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGA...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGAATAGTTTTCCAATGTaGCCAGGATACATCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRNSFPM*PGYIWP
Trigger: TGGCCAGATGTATCCTGGCCACATTGGAAAACTATT...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 90 bp GCAGAGAAAGACCCTCAAATTTCAGAGCAATTACTGACAAGCCCATaGCATAGTTGTCAGAATCGCCTTGAAGCTGTGTGTATACAATGC +
Preference number: 2 (lower is better)
Translates to: AEKDPQISEQLLTSP*HSCQNRLEAVCIQC
Trigger: GCATTGTATACACACAGCTTCAAGGCGATTCTGACAACTATGCAATGGGCTTGTCAGTAATTGCTCTGAAATTTGAGGGTCTTTCTCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 90 bp CATTTAGCCCTTTGCTCTACAAAGAATGTAGTAATCTGGACTAGTTaGGTAAAGAAAGCCTCTCCTGAGTCCAAACAGGAAGCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: HLALCSTKNVVIWTS*VKKASPESKQEALR
Trigger: TCTGAGGGCTTCCTGTTTGGACTCAGGAGAGGCTTTCTTTACCAAACTAGTCCAGATTACTACATTCTTTGTAGAGCAAAGGGCTAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGGGATGCTCATTAACCTaGATCTCCAACCAATTTTCA +
Preference number: 2 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRGCSLT*ISNQFS
Trigger: TGAAAATTGGTTGGAGATTCAGGTTAATGAGCATCC...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTCAGCTGATAGAGAAATaGTTAACCTGGAATGGGTGC +
Preference number: 2 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCQLIEK*LTWNGC
Trigger: GCACCCATTCCAGGTTAATCATTTCTCTATCAGCTG...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTATCCTTTGTTGGTCCTaGTTTAAACAAGAGGAGACC +
Preference number: 2 (lower is better)
Translates to: KTELVILLPMPKAILFLAILCWS*FKQEET
Trigger: GGTCTCCTCTTGTTTAAATCAGGACCAACAAAGGAT...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGAGGCTCACAGAGCAATaGCAGCATCCGATCCTAGTG +
Preference number: 2 (lower is better)
Translates to: FNLENTGQLSLFVGMALLRLTEQ*QHPILV
Trigger: CACTAGGATCGGATGCTGTCATTGCTCTGTGAGCCT...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCACTAAGGTTAAGCCATaGGATTTTGAACAATGCACC +
Preference number: 2 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFTKVKP*DFEQCT
Trigger: GGTGCATTGTTCAAAATCTCATGGCTTAACCTTAGT...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTCAGCACTTACATGACTaGAAGCAGCCATCACTATGT +
Preference number: 2 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCQHLHD*KQPSLC
Trigger: ACATAGTGATGGCTGCTTTCAGTCATGTAAGTGCTG...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATGATCCCTTCATAAAATaGGCCACCGTTGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNDPFIK*ATVVQE
Trigger: TTCCTGCACAACGGTGGCTCATTTTATGAAGGGATC...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR-3UTR GCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTAAAGTCTGTTGTAGGTaGCACAGACTTCCCAAACAA +
Preference number: 2 (lower is better)
Translates to: KTELVILLPMPKAILFLAKVCCR*HRLPKQ
Trigger: TTGTTTGGGAAGTCTGTGGCACCTACAACAGACTTT...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTTTGTTTGGTCTTCAGTaGACCAAACAACTAATTGCT +
Preference number: 2 (lower is better)
Translates to: GLPICWVTFSYITPTEVVLFGLQ*TKQLIA
Trigger: AGCAATTAGTTGTTTGGTGCACTGAAGACCAAACAA...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 90 bp CATCTAGGAGTTCCCAAAGACTCTCACTTCACTGAGTTCAAATGTTaGCTTTTATCTCCCTGCATTTTTGCACTAGGAACCTATGGGACA +
Preference number: 2 (lower is better)
Translates to: HLGVPKDSHFTEFKC*LLSPCIFALGTYGT
Trigger: TGTCCCATAGGTTCCTAGTGCAAAAATGCAGGGAGATAAAAGCAAACATTTGAACTCAGTGAAGTGAGAGTCTTTGGGAACTCCTAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGTTTGGGGTAAACATCTaGTACTGCAAGAATAGTTAC +
Preference number: 2 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRFGVNI*YCKNSY
Trigger: GTAACTATTCTTGCAGTATCAGATGTTTACCCCAAA...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGGACCGACAGCGTCGCTaGACACTTTGTTTATCTGCT +
Preference number: 2 (lower is better)
Translates to: FNLENTGQLSLFVGMALLDRQRR*TLCLSA
Trigger: AGCAGATAAACAAAGTGTTCAGCGACGCTGTCGGTC...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR-3UTR GCA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGCACCTCTATAGCATTTaGCAATATGGAAAGTTTCCA +
Preference number: 2 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRHLYSI*QYGKFP
Trigger: TGGAAACTTTCCATATTGGCAAATGCTATAGAGGTG...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGAAGTGGGGGCACAGCTaGATCCTGAGCTGTTTTAAC +
Preference number: 2 (lower is better)
Translates to: FNLENTGQLSLFVGMALLKWGHS*ILSCFN
Trigger: GTTAAAACAGCTCAGGATGCAGCTGTGCCCCCACTT...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTCTTTGCCGAGAAATATaGAGTCAAGTCTTTGGAAAA +
Preference number: 2 (lower is better)
Translates to: KTELVILLPMPKAILFLALCREI*SQVFGK
Trigger: TTTTCCAAAGACTTGACTTCATATTTCTCGGCAAAG...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATTCTATTTGGGTACTGTaGCAGCTGAGAATGTGTAGA +
Preference number: 2 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNSIWVL*QLRMCR
Trigger: TCTACACATTCTCAGCTGCCACAGTACCCAAATAGA...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTAAATGGATTTCTATTTaGGTACTGTGGCAGCTGAGA +
Preference number: 2 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCKWISI*VLWQLR
Trigger: TCTCAGCTGCCACAGTACCCAAATAGAAATCCATTT...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGTTACTCCAACTGAAGTaGTTATTTTTATCCAGCACT +
Preference number: 2 (lower is better)
Translates to: VARIHLATCTGPIIPRIKLLQLK*LFLSST
Trigger: AGTGCTGGATAAAAATAACCACTTCAGTTGGAGTAA...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATAATAGTTTTCCAATGTaGCCAGGATACATCTGGCCA +
Preference number: 2 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNNSFPM*PGYIWP
Trigger: TGGCCAGATGTATCCTGGCCACATTGGAAAACTATT...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATTGTGTCAACAAAGCCTaGTTTAAGGCTATGGAAACT +
Preference number: 2 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNCVNKA*FKAMET
Trigger: AGTTTCCATAGCCTTAAATCAGGCTTTGTTGACACA...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATGGATGCTCATTAACCTaGATCTCCAACCAATTTTCA +
Preference number: 2 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNGCSLT*ISNQFS
Trigger: TGAAAATTGGTTGGAGATTCAGGTTAATGAGCATCC...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAAAGATGGAAAAACAGATaGGGCTATGGTGGTGTTTTT +
Preference number: 2 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQRWKNR*GYGGVF
Trigger: AAAAACACCACCATAGCCTCATCTGTTTTTCCATCT...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATAGGATGGAATCTAAATaGGGACAATGGATGTTTGCT +
Preference number: 2 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNRMESK*GQWMFA
Trigger: AGCAAACATCCATTGTCCTCATTTAGATTCCATCCT...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCCTGAGTTCAAATGTTTaGTTTTATCTCCCTGCATTT +
Preference number: 2 (lower is better)
Translates to: LHHRILRRSSLIQKPGQILSSNV*FYLPAF
Trigger: AAATGCAGGGAGATAAAAGCAAACATTTGAACTCAG...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 90 bp GCCAGAACATCTAGTCAATTCAGCGAATACCATCAGTCACACCACTaGTTTGGTCTTCAGTGCACCAAACAACTAATTGCTTTAAATTTT +
Preference number: 2 (lower is better)
Translates to: ARTSSQFSEYHQSHH*FGLQCTKQLIALNF
Trigger: AAAATTTAAAGCAATTAGTTGTTTGGTGCACTGAAGACCAAACAAGTGGTGTGACTGATGGTATTCGCTGAATTGACTAGATGTTCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR TCA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAACTTTGCCGAGAAATATaGAGTCAAGTCTTTGGAAAA +
Preference number: 2 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQLCREI*SQVFGK
Trigger: TTTTCCAAAGACTTGACTTCATATTTCTCGGCAAAG...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTGTGACTTTAGTAACTaGTTGCAAAATACTGGTCCC +
Preference number: 2 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCCDFSN*LQNTGP
Trigger: GGGACCAGTATTTTGCAAGCAGTTACTAAAGTCACA...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGTCTATTTGGGTACTGTaGCAGCTGAGAATGTGTAGA +
Preference number: 2 (lower is better)
Translates to: FNLENTGQLSLFVGMALLSIWVL*QLRMCR
Trigger: TCTACACATTCTCAGCTGCCACAGTACCCAAATAGA...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCAAACAGATGAGGCTATaGTGGTGTTTTTCTTCTAGC +
Preference number: 2 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCKQMRL*WCFSSS
Trigger: GCTAGAAGAAAAACACCACCATAGCCTCATCTGTTT...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR GCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGCTTGTGCAAAAGAGATaGCCAACAATTAGTCTCAAC +
Preference number: 2 (lower is better)
Translates to: FNLENTGQLSLFVGMALLLVQKR*PTISLN
Trigger: GTTGAGACTAATTGTTGGGCATCTCTTTTGCACAAG...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGAAACAGATGAGGCTATaGTGGTGTTTTTCTTCTAGC +
Preference number: 2 (lower is better)
Translates to: FNLENTGQLSLFVGMALLKQMRL*WCFSSS
Trigger: GCTAGAAGAAAAACACCACCATAGCCTCATCTGTTT...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp CCGCCCGCCCCTGTCGGGCGTGACCGACAGCGTCGCTaGACACTTTGTTTATCTGCTCTTCCGAGGGCATCC +
Preference number: 3 (lower is better)
Translates to: PPAPVGRDRQRR*TLCLSALPRAS
Trigger: GGATGCCCTCGGAAGAGCAGATAAACAAAGTGTTCAGCGACGCTGTCGGTCACGCCCGACAGGGGCGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR CCA 72 bp AGCAGTGTCCACAGTGATGCTGTATCACGGCCTCAGTaGCGGCTAGTGCCTGCGTCAGACGCTAGGCTTGGC +
Preference number: 3 (lower is better)
Translates to: SSVHSDAVSRPQ*RLVPASDARLG
Trigger: GCCAAGCCTAGCGTCTGACGCAGGCACTAGCCGCCACTGAGGCCGTGATACAGCATCACTGTGGACACTGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CCA 72 bp GCAGCAGTGGTGCAGGTGCGTTGTCATGTACGGCCATaGAGCAGGGGTGCAGAAAGTGCTCTCATCAGCCTC +
Preference number: 3 (lower is better)
Translates to: AAVVQVRCHVRP*SRGAESALISL
Trigger: GAGGCTGATGAGAGCACTTTCTGCACCCCTGCTCCATGGCCGTACATGACAACGCACCTGCACCACTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTCTACCCCAGCCTACCTaGGGGACTATCTCTGCCCAG +
Preference number: 3 (lower is better)
Translates to: MPCSQEVQARTLMALACSLPQPT*GTISAQ
Trigger: CTGGGCAGAGATAGTCCCCAAGGTAGGCTGGGGTAG...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTTGGCTGGAACTGAGCTaGGGGCTTCAACTCACTGCG +
Preference number: 3 (lower is better)
Translates to: MPCSQEVQARTLMALACSWLELS*GLQLTA
Trigger: CGCAGTGAGTTGAAGCCCCAAGCTCAGTTCCAGCCA...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp ATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTaGTGCTGTATCACGGCCTCAGTGGCGGCTAGTGCC +
Preference number: 3 (lower is better)
Translates to: ICPKERSQQCPQ*CCITASVAASA
Trigger: GGCACTAGCCGCCACTGAGGCCGTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR GCA 72 bp GCAGGTGCGTTGTCATGTACGGCCATGGAGCAGGGGTaGAGAAAGTGCTCTCATCAGCCTCAGCGAAGACCA +
Preference number: 3 (lower is better)
Translates to: AGALSCTAMEQG*RKCSHQPQRRP
Trigger: TGGTCTTCGCTGAGGCTGATGAGAGCACTTTCTGCACCCCTGCTCCATGGCCGTACATGACAACGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp CAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATaGCCCACCTCTAGCATGCCCTGTTCCCAAGAAGTG +
Preference number: 3 (lower is better)
Translates to: QGRAGTVTLKAS*PTSSMPCSQEV
Trigger: CACTTCTTGGGAACAGGGCATGCTAGAGGTGGGTCATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp ATCCTGAGAAGCCTGGTGATCGATCCCTTCATAAAATaGGCCACCGTTGTGCAGGAAAGTCCCCACCGCCCG +
Preference number: 3 (lower is better)
Translates to: ILRSLVIDPFIK*ATVVQESPHRP
Trigger: CGGGCGGTGGGGACTTTCCTGCACAACGGTGGCTCATTTTATGAAGGGATCGATCACCAGGCTTCTCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR TCA 72 bp GCTCACAGAGCAATGACAGCATCCGATCCTAGTGAGTaGGCTTTTAACCTGGCTACACAGAGGCCCAATGGG +
Preference number: 3 (lower is better)
Translates to: AHRAMTASDPSE*AFNLATQRPNG
Trigger: CCCATTGGGCCTCTGTGTAGCCAGGTTAAAAGCTCACTCACTAGGATCGGATGCTGTCATTGCTCTGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp GACCCAGCAGAGGAGTTAGAACTGGCTGTGCGATGCTaGGTATGGAGTCTGTCAGCCTTGTGCAAAAGAGAT +
Preference number: 3 (lower is better)
Translates to: DPAEELELAVRC*VWSLSALCKRD
Trigger: ATCTCTTTTGCACAAGGCTGACAGACTCCATACTCAGCATCGCACAGCCAGTTCTAACTCCTCTGCTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CCA 72 bp GGGAGGAAGAGACCATGTGTAACTTTGGAACAAAAGTaGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAG +
Preference number: 3 (lower is better)
Translates to: GRKRPCVTLEQK*CANLGQQPSQE
Trigger: CTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTGTTCCAAAGTTACACATGGTCTCTTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACTTACTGACAAGCCCATaGCATAGTTGTCAGAATCGC +
Preference number: 3 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHLLTSP*HSCQNR
Trigger: GCGATTCTGACAACTATGCAATGGGCTTGTCAGTAA...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCTGGCTGGAACTGAGCTaGGGGCTTCAACTCACTGCG +
Preference number: 3 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIWLELS*GLQLTA
Trigger: CGCAGTGAGTTGAAGCCCCAAGCTCAGTTCCAGCCA...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTTCAAATAGTGCCTTCTaGATCAACACAGTGGTTTTT +
Preference number: 3 (lower is better)
Translates to: MPCSQEVQARTLMALACSSNSAF*INTVVF
Trigger: AAAAACCACTGTGTTGATCAAGAAGGCACTATTTGA...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTAGTGGTGCAGGTGCGTaGTCATGTACGGCCATGGAG +
Preference number: 3 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCSGAGA*SCTAME
Trigger: CTCCATGGCCGTACATGACAACGCACCTGCACCACT...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR GCA 72 bp GAAGAGACCATGTGTAACTTTGGAACAAAAGTGGTGTaGAAACCTGGGACAGCAGCCTTCTCAGGAGGTAAC +
Preference number: 3 (lower is better)
Translates to: EETMCNFGTKVV*KPGTAAFSGGN
Trigger: GTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTGTTCCAAAGTTACACATGGTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR GCA 72 bp CCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTaGTTGCAAAATACTGGTCCCCTCCACAGGCTCCTG +
Preference number: 3 (lower is better)
Translates to: PSRVSEKCDFSN*LQNTGPLHRLL
Trigger: CAGGAGCCTGTGGAGGGGACCAGTATTTTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAGAGAATGTTTGCTTCTaGTCCCTTAACACAACTCCA +
Preference number: 3 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSENVCF*SLNTTP
Trigger: TGGAGTTGTGTTAAGGGACAAGAAGCAAACATTCTC...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATGTCCATTTAGCCCTTaGCTCTACAAAGAATGTAGT +
Preference number: 3 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVCPFSP*LYKECS
Trigger: ACTACATTCTTTGTAGAGCAAAGGGCTAAATGGACA...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGGCTGACAGTGTAACTTaGCAGAGGACTACCCATCTG +
Preference number: 3 (lower is better)
Translates to: VARIHLATCTGPIIPRIKADSVT*QRTTHL
Trigger: CAGATGGGTAGTCCTCTGCAAAGTTACACTGTCAGC...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCCACTGTCTGCAGATGTaGCCTCTGTTCTCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIHCLQM*PLFSGF
Trigger: GAAACCAGAGAACAGAGGCAACATCTGCAGACAGTG...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGAGTCACACCACTTGTTaGGTCTTCAGTGCACCAAAC +
Preference number: 3 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRSHTTC*VFSAPN
Trigger: GTTTGGTGCACTGAAGACCAAACAAGTGGTGTGACT...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTCATCAGTCACACCACTaGTTTGGTCTTCAGTGCACC +
Preference number: 3 (lower is better)
Translates to: KTELVILLPMPKAILFLAHQSHH*FGLQCT
Trigger: GGTGCACTGAAGACCAAACAAGTGGTGTGACTGATG...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCTGGAGTCTGTCAGCCTaGTGCAAAAGAGATGCCCAA +
Preference number: 3 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIWSLSA*CKRDAQ
Trigger: TTGGGCATCTCTTTTGCACAAGGCTGACAGACTCCA...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp TCCACTAATCCCCAGATCCATCCTGGGAACTTTTATTaGAGACTTCATCCTGAGAAGCCTGGTGATCGATCC +
Preference number: 3 (lower is better)
Translates to: STNPQIHPGNFY*RLHPEKPGDRS
Trigger: GGATCGATCACCAGGCTTCTCAGGATGAAGTCTTCAATAAAAGTTCCCAGGATGGATCTGGGGATTAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR GCA 72 bp TCTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTaGCGTAAGAACATGGCATTTGCCCATATCATTTCT +
Preference number: 3 (lower is better)
Translates to: SSLESQRDWSHG*RKNMAFAHIIS
Trigger: AGAAATGATATGGGCAAATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR GCA 72 bp GCTTTTAACCTGGCTACACAGAGGCCCAATGGGCCTTaGCAAAATACAAATGAACATCCTTTGTTGGTCCTG +
Preference number: 3 (lower is better)
Translates to: AFNLATQRPNGP*QNTNEHPLLVL
Trigger: CAGGACCAACAAAGGATGTTCATTTGTATTTTGGCAAGGCCCATTGGGCCTCTGTGTAGCCAGGTTAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp TCTCCAAGGATTTCAACTGAAAGGCTCACAGAGCAATaGCAGCATCCGATCCTAGTGAGTGAGCTTTTAACC +
Preference number: 3 (lower is better)
Translates to: SPRISTERLTEQ*QHPILVSELLT
Trigger: GGTTAAAAGCTCACTCACTAGGATCGGATGCTGTCATTGCTCTGTGAGCCTTTCAGTTGAAATCCTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp TGCAGAATACCCGATCACCCACTAACTCTACAGCCGTaGAGTAGCTACAAATATGTCTCGAATCCCCTACAA +
Preference number: 3 (lower is better)
Translates to: CRIPDHPLTLQP*SSYKYVSNPLQ
Trigger: TTGTAGGGGATTCGAGACATATTTGTAGCTACTTCACGGCTGTAGAGTTAGTGGGTGATCGGGTATTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp TCAGCTCTAAAGCTACAAAGACACAAACGTGAAAAGTaGATTGAACGTTGGCTACCTGATGCCCCGGTGCTA +
Preference number: 3 (lower is better)
Translates to: SALKLQRHKREK*IERWLPDAPVL
Trigger: TAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGTGTCTTTGTAGCTTTAGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGAAAATGGATTTCTATTaGGGTACTGTGGCAGCTGAG +
Preference number: 3 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRKMDFY*GTVAAE
Trigger: CTCAGCTGCCACAGTACCCAAATAGAAATCCATTTT...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTTTAAGCCATGAGATTTaGAACAATGCACCGTCAAGA +
Preference number: 3 (lower is better)
Translates to: GLPICWVTFSYITPTEVVLSHEI*NNAPSR
Trigger: TCTTGACGGTGCATTGTTCAAAATCTCATGGCTTAA...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGATCCATTCCAAAGTGTaGATGGGCTTTGAGAACTGT +
Preference number: 3 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRIHSKV*MGFENC
Trigger: ACAGTTCTCAAAGCCCATCAACACTTTGGAATGGAT...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp AAACCCAACATAAATAAAAGAACCAGTGCCACTGGCTaGCAGTGTAACTTTGCAGAGGACTACCCATCTGCT +
Preference number: 3 (lower is better)
Translates to: KPNINKRTSATG*QCNFAEDYPSA
Trigger: AGCAGATGGGTAGTCCTCTGCAAAGTTACACTGTCAGCCAGTGGCACTGGTTCTTTTATTTATGTTGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp CCTTCAGAAGTCAAATTAACCAAGCTGGTCATCAGATaGGGGAAGTCTCAACCTCTCAGTGTTAACCTGCAA +
Preference number: 3 (lower is better)
Translates to: PSEVKLTKLVIR*GKSQPLSVNLQ
Trigger: TTGCAGGTTAACACTGAGAGGTTGAGACTTCCCTCATCTGATGACCAGCTTGGTTAATTTGACTTCTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR GCA 72 bp CTGAGTATGGAGTCTGTCAGCCTTGTGCAAAAGAGATaGCCAACAATTAGTCTCAACATTCAGAATCTGTGG +
Preference number: 3 (lower is better)
Translates to: LSMESVSLVQKR*PTISLNIQNLW
Trigger: CCACAGATTCTGAATGTTGAGACTAATTGTTGGGCATCTCTTTTGCACAAGGCTGACAGACTCCATACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTATACACCAGCAAGACTaGCACCATATGTGCAAAATC +
Preference number: 3 (lower is better)
Translates to: KTELVILLPMPKAILFLAIHQQD*HHMCKI
Trigger: GATTTTGCACATATGGTGCAAGTCTTGCTGGTGTAT...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp ACTATAGTTACTACTGTTGTTGCAGTTAAGTGGTTCTaGACGGGCCCAAATAGTTTTCCAATGTGGCCAGGA +
Preference number: 3 (lower is better)
Translates to: TIVTTVVAVKWF*TGPNSFPMWPG
Trigger: TCCTGGCCACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAGTAACTATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CCA 72 bp CAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTaGGTACTGTGGCAGCTGAGAATGTGTAGACTATGG +
Preference number: 3 (lower is better)
Translates to: QTSQTTLKWISI*VLWQLRMCRLW
Trigger: CCATAGTCTACACATTCTCAGCTGCCACAGTACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATTTACTGACAAGCCCATaGCATAGTTGTCAGAATCGC +
Preference number: 3 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNLLTSP*HSCQNR
Trigger: GCGATTCTGACAACTATGCAATGGGCTTGTCAGTAA...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGAATTTTCAAAAACCCTaGGTCATGTCTGTAGATGAC +
Preference number: 3 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRNFQKP*VMSVDD
Trigger: GTCATCTACAGACATGACCAAGGGTTTTTGAAAATT...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCAATTTTCAAAAACCCTaGGTCATGTCTGTAGATGAC +
Preference number: 3 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFNFQKP*VMSVDD
Trigger: GTCATCTACAGACATGACCAAGGGTTTTTGAAAATT...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp TCCTGTAGGAATCTCTTATGTCAATGTGTCTGTCACTaGCAAAGGGATAAGGAACAATGCAGAATACCCGAT +
Preference number: 3 (lower is better)
Translates to: SCRNLLCQCVCH*QRDKEQCRIPD
Trigger: ATCGGGTATTCTGCATTGTTCCTTATCCCTTTGTCAGTGACAGACACATTGACATAAGAGATTCCTACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CCA 72 bp CATTTAGCCCTTTGCTCTACAAAGAATGTAGTAATCTaGACTAGTTTGGTAAAGAAAGCCTCTCCTGAGTCC +
Preference number: 3 (lower is better)
Translates to: HLALCSTKNVVI*TSLVKKASPES
Trigger: GGACTCAGGAGAGGCTTTCTTTACCAAACTAGTCCAGATTACTACATTCTTTGTAGAGCAAAGGGCTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCATCTATCCTATGTCTTaGCCGAGAAATATGAAGTCA +
Preference number: 3 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIIYPMS*PRNMKS
Trigger: TGACTTCATATTTCTCGGCAAAGACATAGGATAGAT...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp TTCTACCCATCACTTTGGCATTGTGTCAACAAAGCCTaGTTTAAGGCTATGGAAACTGCGGATTTATTAACC +
Preference number: 3 (lower is better)
Translates to: FYPSLWHCVNKA*FKAMETADLLT
Trigger: GGTTAATAAATCCGCAGTTTCCATAGCCTTAAATCAGGCTTTGTTGACACAATGCCAAAGTGATGGGTAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp CTATGGTGGTGTTTTTCTTCTAGCGAAGATGTCATGTTGTCAAAGAATCTTATACCCATCACTTTGGCATaGTGTCAACAAAGCCTGATT +
Preference number: 3 (lower is better)
Translates to: LWWCFSSSEDVMLSKNLIPITLA*CQQSLI
Trigger: AATCAGGCTTTGTTGACACAATGCCAAAGTGATGGG...TATAAGATTCTTTGACAACATGACATCTTCGCTAGAAGAAAAACACCACCATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp ACCAGCACGATAGGGCTCCAAGATGATATTTGGATATaGAGAAATATTCAGGACTCTCAAACTTCCAGAAAA +
Preference number: 3 (lower is better)
Translates to: TSTIGLQDDIWI*RNIQDSQTSRK
Trigger: TTTTCTGGAAGTTTGAGAGTCCTGAATATTTCTTCATATCCAAATATCATCTTGGAGCCCTATCGTGCTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp CTAACATCTAGGAGTTCCCAAAGACTCTCACTTCACTaGGTTCAAATGTTTGCTTTTATCTCCCTGCATTTT +
Preference number: 3 (lower is better)
Translates to: LTSRSSQRLSLH*VQMFAFISLHF
Trigger: AAAATGCAGGGAGATAAAAGCAAACATTTGAACTCAGTGAAGTGAGAGTCTTTGGGAACTCCTAGATGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp TATCCCCAACAGAACACGTGGCATTCTAGAGGTATATaGGGTAATAAAATCAACACTCCAATTAGAACACCT +
Preference number: 3 (lower is better)
Translates to: YPQQNTWHSRGI*GNKINTPIRTP
Trigger: AGGTGTTCTAATTGGAGTGTTGATTTTATTACCTCATATACCTCTAGAATGCCACGTGTTCTGTTGGGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CCA 72 bp TCAATTCAGCGAATACCATCAGTCACACCACTTGTTTaGTCTTCAGTGCACCAAACAACTAATTGCTTTAAA +
Preference number: 3 (lower is better)
Translates to: SIQRIPSVTPLV*SSVHQTTNCFK
Trigger: TTTAAAGCAATTAGTTGTTTGGTGCACTGAAGACCAAACAAGTGGTGTGACTGATGGTATTCGCTGAATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR-3UTR CAA 90 bp CTATGGTGGTGTTTTTCTTCTAGCGAAGATGTCATGTTGTCAAAGAATCTTATAGAGAATGTTTGCTTCTaGTCCCTTAACACAACTCCA +
Preference number: 3 (lower is better)
Translates to: LWWCFSSSEDVMLSKNLIENVCF*SLNTTP
Trigger: TGGAGTTGTGTTAAGGGACAAGAAGCAAACATTCTC...TATAAGATTCTTTGACAACATGACATCTTCGCTAGAAGAAAAACACCACCATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR TCA 72 bp ACTGAAGTGGTTATTTTTATCCAGCACTTACATGACTaGAAGCAGCCATCACTATGTTTACAAAAATACATC +
Preference number: 3 (lower is better)
Translates to: TEVVIFIQHLHD*KQPSLCLQKYI
Trigger: GATGTATTTTTGTAAACATAGTGATGGCTGCTTTCAGTCATGTAAGTGCTGGATAAAAATAACCACTTCAGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACGAGGGTGTGTGTCTGTaGCGTGGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHEGVCL*RGRRRR
Trigger: GCGGCGGCGGCGGCCACGGCACAGACACACACCCTC...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACGAGGCTTCTGCGGCTaGGGGCGGGGTCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSRGFCG*GRGPAS
Trigger: GGAAGCCGGACCCCGCCCGCAGCCGCAGAAGCCTCG...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATGACGCGGGCGGCGGCTaGGCCGGAGTCCTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHDAGGG*AGVLKW
Trigger: CCACTTGAGGACTCCGGCGCAGCCGCCGCCCGCGTC...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTTGCCTCGCCAATGCCTaGAGGACGCCCGGGAACTGG +
Preference number: 4 (lower is better)
Translates to: MPCSQEVQARTLMALACSCLANA*RTPGNW
Trigger: CCAGTTCCCGGGCGTCCTCCAGGCATTGGCGAGGCA...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACGCCGCCGCCTGTCGCTaGGGCTGGCATCGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNAAACR*GWHRRA
Trigger: GGCTCGGCGATGCCAGCCTCAGCGACAGGCGGCGGC...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACACGCCCCTGTCGGGCGTaGCCGACAGCGTCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTRPCRA*PTASLN
Trigger: GTTCAGCGACGCTGTCGGTCACGCCCGACAGGGGCG...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGCCGGGTCTGCCCTGGTaGGCGCGTGTGGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMPGLPW*ARVGGC
Trigger: ACACCCTCCCACACGCGCGCACCAGGGCAGACCCGG...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AGCAGAGGAGTTAGAACTGGCTGTGCGATGCTGAGTATGGAGTCTGTCAGCCTTGGGATGTGGCGGGCGTaGAGGACGGCGACGACGACG +
Preference number: 4 (lower is better)
Translates to: SRGVRTGCAMLSMESVSLGMWRA*RTATTT
Trigger: CGTCGTCGTCGCCGTCCTGCACGCCCGCCACATCCC...AAGGCTGACAGACTCCATACTCAGCATCGCACAGCCAGTTCTAACTCCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACAAGTGGCCCTGGGATGTaGCGGGCGTGCAGGACGGCG +
Preference number: 4 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTSGPGM*RACRTA
Trigger: CGCCGTCCTGCACGCCCGCCACATCCCAGGGCCACT...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCGCCGCCGCCTGTCGCTaGGGCTGGCATCGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: FTIGTLERTSCYNRKILSAAACR*GWHRRA
Trigger: GGCTCGGCGATGCCAGCCTCAGCGACAGGCGGCGGC...GGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTTGCGCCTGGAACTGCTaGGGCGGCGGCTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QVTGTGHSQLELLRGPAACAWNC*GGGSLL
Trigger: CAGCAGCGAGCCGCCGCCGCAGCAGTTCCAGGCGCA...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp ACACAACTCCATGTCTCCACCTTCTCCCATGGGCAGAAACACTACCCCAGCCTAGCTCGTGGCGCCCCCTaGATGACCCCAAACTCTCGG +
Preference number: 4 (lower is better)
Translates to: TQLHVSTFSHGQKHYPSLARGAP*MTPNSR
Trigger: CCGAGAGTTTGGGGTCATGCAGGGGGCGCCACGAGC...TAGGCTGGGGTAGTGTTTCTGCCCATGGGAGAAGGTGGAGACATGGAGTTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR TCA 90 bp ACACAACTCCATGTCTCCACCTTCTCCCATGGGCAGAAACACTACCCCAGCCTATGCTGGGGAACGTCTTaGGGACGCTGTAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TQLHVSTFSHGQKHYPSLCWGTS*GRCRGC
Trigger: GCAGCCCCTACAGCGTCCTCAAGACGTTCCCCAGCA...TAGGCTGGGGTAGTGTTTCTGCCCATGGGAGAAGGTGGAGACATGGAGTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATCGCCTGGGCCATACCTaGCGACAGCGGCGAACGAAG +
Preference number: 4 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHRLGHT*RQRRTK
Trigger: CTTCGTTCGCCGCTGTCGTCAGGTATGGCCCAGGCG...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACACGCCTGGGCCATACCTaGCGACAGCGGCGAACGAAG +
Preference number: 4 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTRLGHT*RQRRTK
Trigger: CTTCGTTCGCCGCTGTCGTCAGGTATGGCCCAGGCG...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGCGCCCCTGTCGGGCGTaGCCGACAGCGTCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RNRTFTIGTLERTSCYNRRPCRA*PTASLN
Trigger: GTTCAGCGACGCTGTCGGTCACGCCCGACAGGGGCG...CCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTTGGACTCGAGGCTTCTaGGGCTGCGGGCGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPAWTRGF*GCGRGP
Trigger: CGGACCCCGCCCGCAGCCGCAGAAGCCTCGAGTCCA...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTTGCGCCTGGAACTGCTaGGGCGGCGGCTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLPICWVTFSYITPTEVVCAWNC*GGGSLL
Trigger: CAGCAGCGAGCCGCCGCCGCAGCAGTTCCAGGCGCA...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGGACGCGGGCGGCGGCTaGGCCGGAGTCCTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKDAGGG*AGVLKW
Trigger: CCACTTGAGGACTCCGGCGCAGCCGCCGCCCGCGTC...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACAGCAGCTCCACCAGGGTaGGTCGCTCGTAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTAAPPG*VARSAW
Trigger: CCAAGCGCTACGAGCGACCCACCCTGGTGGAGCTGC...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGGTCCTCAAGTGGCCCTaGGATGTGGCGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMVLKWP*DVAGVQ
Trigger: CTGCACGCCCGCCACATCCCAGGGCCACTTGAGGAC...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACATGCCGCCCGAGCTCCTaGTTGACAGGCTGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: VTGTGHSQLELLRGPAATCRPSS*LTGCLA
Trigger: GGCGAGGCAGCCTGTCAATCAGGAGCTCGGGCGGCA...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCATTCGACTCTCTGCGCTaGGCTCCAGGCTGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSFDSLR*APGWRC
Trigger: ACAGCGCCAGCCTGGAGCTCAGCGCAGAGAGTCGAA...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGACCGGGTCTGCCCTGGTaGGCGCGTGTGGGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: ALDSQVTGTGHSQLELLRPGLPW*ARVGGC
Trigger: ACACCCTCCCACACGCGCGCACCAGGGCAGACCCGG...TCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCCTCTGCGCCTGGAACTaGTGCGGCGGCGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFLCAWN*CGGGSL
Trigger: CAGCGAGCCGCCGCCGCAGCAGTTCCAGGCGCAGAG...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TCGGGCGTGACCGACAGCGTCGCTGAACACTTTGTTTATCTGCTCTTCCGAGGGTTAGAGACCCAGATGTaGACTCGAGGCTTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SGVTDSVAEHFVYLLFRGLETQM*TRGFCG
Trigger: GCCGCAGAAGCCTCGAGTCCACATCTGGGTCTCTAA...CCCTCGGAAGAGCAGATAAACAAAGTGTTCAGCGACGCTGTCGGTCACGCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR CCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACCCTGGTGCGCGCGTGTaGGAGGGTGTGTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYPGARV*EGVCLC
Trigger: GCACAGACACACACCCTCCCACACGCGCGCACCAGG...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTGCAGCTCCACCAGGGTaGGTCGCTCGTAGCGCTTGG +
Preference number: 4 (lower is better)
Translates to: QVTGTGHSQLELLRGPAAAAPPG*VARSAW
Trigger: CCAAGCGCTACGAGCGACCCACCCTGGTGGAGCTGC...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCAGTGGCCCTGGGATGTaGCGGGCGTGCAGGACGGCG +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFSGPGM*RACRTA
Trigger: CGCCGTCCTGCACGCCCGCCACATCCCAGGGCCACT...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAAGATCTTGGCCCGGGTaGTCGCGCGGTGTTTACGGG +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSRSWPG*SRGVYG
Trigger: CCCGTAAACACCGCGCGACCACCCGGGCCAAGATCT...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR TCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCCGCCCCTGTCGGGCGTaGCCGACAGCGTCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIRPCRA*PTASLN
Trigger: GTTCAGCGACGCTGTCGGTCACGCCCGACAGGGGCG...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTTGGACTCGAGGCTTCTaGGGCTGCGGGCGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: KTELVILLPMPKAILFLAWTRGF*GCGRGP
Trigger: CGGACCCCGCCCGCAGCCGCAGAAGCCTCGAGTCCA...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GTTGTAGGTGCCACAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTGGGTGAGGGTGTGTGTCTGTaGCGTGGCCGCCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VVGATDFPNNPKMDFYLGEGVCL*RGRRRR
Trigger: GCGGCGGCGGCGGCCACGGCACAGACACACACCCTC...ACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTGTGGCACCTACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAGCTGGGCCCCTCCTCTaGCGGCTGCATCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GTGHSQLELLRGPAATTGAGPLL*RLHLFL
Trigger: GAGGAAGAGATGCAGCCGGCAGAGGAGGGGCCCAGC...TCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTGGGCCCCTCCTCTaGCGGCTGCATCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPAAGPLL*RLHLFL
Trigger: GAGGAAGAGATGCAGCCGGCAGAGGAGGGGCCCAGC...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp ACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGGGGATGTGGCGGGCGTaGAGGACGGCGACGACGACG +
Preference number: 4 (lower is better)
Translates to: TFTIGTLERTSCYNRKILGMWRA*RTATTT
Trigger: CGTCGTCGTCGCCGTCCTGCACGCCCGCCACATCCC...CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACACCTGGTGCGCGCGTGTaGGAGGGTGTGTGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VTGTGHSQLELLRGPAATPGARV*EGVCLC
Trigger: GCACAGACACACACCCTCCCACACGCGCGCACCAGG...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGCCGGAGTCCTCAAGTaGCCCTGGGATGTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: TGTGHSQLELLRGPAATTAGVLK*PWDVAG
Trigger: GCCCGCCACATCCCAGGGCCACTTGAGGACTCCGGC...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACACAACTCCATGTCTCCACCTTCTCCCATGGGCAGAAACACTACCCCAGCCTACTTCCCTCTGTCGGCTaGTCAGCTGGCTGTGGTATC +
Preference number: 4 (lower is better)
Translates to: TQLHVSTFSHGQKHYPSLLPSVG*SAGCGI
Trigger: GATACCACAGCCAGCTGACCAGCCGACAGAGGGAAG...TAGGCTGGGGTAGTGTTTCTGCCCATGGGAGAAGGTGGAGACATGGAGTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AGCAGAGGAGTTAGAACTGGCTGTGCGATGCTGAGTATGGAGTCTGTCAGCCTTCCGCCCTTGCAGCAGTaGTGCAGGTGCGTTGTCATG +
Preference number: 4 (lower is better)
Translates to: SRGVRTGCAMLSMESVSLPPLQQ*CRCVVM
Trigger: CATGACAACGCACCTGCACCACTGCTGCAAGGGCGG...AAGGCTGACAGACTCCATACTCAGCATCGCACAGCCAGTTCTAACTCCTCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACAGTATCACGGCCTCAGTaGCGGCTAGTGCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTVSRPQ*RLVPAS
Trigger: TGACGCAGGCACTAGCCGCCACTGAGGCCGTGATAC...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCACGCCCGGGAACTGGTaGAGAAGGTGGGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFTPGNW*RRWGSG
Trigger: CCCGGATCCCCACCTTCTTCACCAGTTCCCGGGCGT...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGAACGCCCGGGAACTGGTaGAGAAGGTGGGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRTPGNW*RRWGSG
Trigger: CCCGGATCCCCACCTTCTTCACCAGTTCCCGGGCGT...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACACAACTCCATGTCTCCACCTTCTCCCATGGGCAGAAACACTACCCCAGCCTAGCCATATTCACTGGCTaGCGAGGGGTTTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: TQLHVSTFSHGQKHYPSLAIFTG*RGVWSW
Trigger: CCAACTCCAAACCCCTCGTCAGCCAGTGAATATGGC...TAGGCTGGGGTAGTGTTTCTGCCCATGGGAGAAGGTGGAGACATGGAGTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATGAGCCTGGCTGGAACTaGGCTTGGGGCTTCAACTCA +
Preference number: 4 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHEPGWN*AWGFNS
Trigger: TGAGTTGAAGCCCCAAGCTCAGTTCCAGCCAGGCTC...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACGAGGCAACAAGCCATTaGGAGCGGCAGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHEATSH*ERQGNV
Trigger: TACATTCCCCTGCCGCTCTCAATGGCTTGTTGCCTC...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTTCTCCATCTGTTTTCTaGGAGCAACAGAAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: MPCSQEVQARTLMALACSSPSVF*EQQKGG
Trigger: GCCTCCCTTCTGTTGCTCTCAGAAAACAGATGGAGA...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACATTCGACTCTCTGCGCTaGGCTCCAGGCTGGGGAACG +
Preference number: 4 (lower is better)
Translates to: VTGTGHSQLELLRGPAATFDSLR*APGWGT
Trigger: CGTTCCCCAGCCTGGAGCTCAGCGCAGAGAGTCGAA...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611697.1
CDS-3UTR GCA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCAGGCTGCCTCGCCAATaGCTGGAGGACGCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: GHSQLELLRGPAATTGRFRLPRQ*LEDARE
Trigger: TTCCCGGGCGTCCTCCAGGCATTGGCGAGGCAGCCT...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACCCCTCCTCTGCCGGCTaGATCTCTTCCTCCATCCGG +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNPSSAG*ISSSIR
Trigger: CCGGATGGAGGAAGAGATGCAGCCGGCAGAGGAGGG...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTCCCTCCTCTGCCGGCTaGATCTCTTCCTCCATCCGG +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPAPSSAG*ISSSIR
Trigger: CCGGATGGAGGAAGAGATGCAGCCGGCAGAGGAGGG...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp GCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGCTGGGCCCCTCCTCTaGCGGCTGCATCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ALDSQVTGTGHSQLELLRAGPLL*RLHLFL
Trigger: GAGGAAGAGATGCAGCCGGCAGAGGAGGGGCCCAGC...TCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAATGGGATTCGGACGTTaGTGGGGAAGTCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSMGFGR*WGSPAT
Trigger: GGTGGCTGGACTTCCCCAGCAACGTCCGAATCCCAT...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATGGGGATCCGGGATCTaGCTACGGCGAGACTTTAGA +
Preference number: 4 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVWGSGI*LRRDFR
Trigger: TCTAAAGTCTCGCCGTAGCCAGATCCCGGATCCCCA...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AGCAGAGGAGTTAGAACTGGCTGTGCGATGCTGAGTATGGAGTCTGTCAGCCTTGCTGCTTGTAGATTTTaGGGACGCTGGGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRGVRTGCAMLSMESVSLAACRF*GRWAPP
Trigger: AGGAGGGGCCCAGCGTCCCCAAAATCTACAAGCAGC...AAGGCTGACAGACTCCATACTCAGCATCGCACAGCCAGTTCTAACTCCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGTCGCTCGTAGCGCTTaGCCAGCGCCGGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TGTGHSQLELLRGPAATTVARSA*PAPVSC
Trigger: GCAAGAGACCGGCGCTGGCCAAGCGCTACGAGCGAC...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACATACCCCAGCCTACCTTaGGGACTATCTCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTYPSLP*GLSLPR
Trigger: CCTGGGCAGAGATAGTCCCCAAGGTAGGCTGGGGTA...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCATCCGAAACGAGCTCGTaGCGCCCCCTGCATGACCCC +
Preference number: 4 (lower is better)
Translates to: SQLELLRGPAATTGRFCPSETSS*RPLHDP
Trigger: GGGGTCATGCAGGGGGCGCCACGAGCTCGTTTCGGA...TGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504360.5
3UTR CAA 72 bp CTTCTCCCATGGGCAGAAACACTACCCCAGCCTACCTaGGGGACTATCTCTGCCCAGGTAGCAGAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LLPWAETLPQPT*GTISAQVAEFE
Trigger: TTCAAACTCTGCTACCTGGGCAGAGATAGTCCCCAAGGTAGGCTGGGGTAGTGTTTCTGCCCATGGGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGCCCGAGCTCCTGATTaGCAGGCTGCCTCGCCAATG +
Preference number: 4 (lower is better)
Translates to: ALDSQVTGTGHSQLELLRARAPD*QAASPM
Trigger: CATTGGCGAGGCAGCCTGTCAATCAGGAGCTCGGGC...TCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGTGCTGGGGAACGTCTTaGGGACGCTGTAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKCWGTS*GRCRGC
Trigger: GCAGCCCCTACAGCGTCCTCAAGACGTTCCCCAGCA...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGTTCGACTCTCTGCGCTaGGCTCCAGGCTGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: VARIHLATCTGPIIPRIKFDSLR*APGWRC
Trigger: ACAGCGCCAGCCTGGAGCTCAGCGCAGAGAGTCGAA...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGGCCATATTCACTGGCTaGCGAGGGGTTTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMAIFTG*RGVWSW
Trigger: CCAACTCCAAACCCCTCGTCAGCCAGTGAATATGGC...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACCTGAAAAGAACCTCTTaGAGATCTTGGCCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHLKRTS*RSWPGW
Trigger: CCACCCGGGCCAAGATCTTCAAGAGGTTCTTTTCAG...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR TCA 90 bp ACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGGGCTGGGGAACGTCTTaGGGACGCTGTAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TFTIGTLERTSCYNRKILGWGTS*GRCRGC
Trigger: GCAGCCCCTACAGCGTCCTCAAGACGTTCCCCAGCC...CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611697.1
CDS-3UTR GCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCCGAGGCTTCTGCGGCTaGGGGCGGGGTCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCRGFCG*GRGPAS
Trigger: GGAAGCCGGACCCCGCCCGCAGCCGCAGAAGCCTCG...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGCCCTCCTCTGCCGGCTaGATCTCTTCCTCCATCCGG +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKPSSAG*ISSSIR
Trigger: CCGGATGGAGGAAGAGATGCAGCCGGCAGAGGAGGG...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATCTCTGCGCCTGGAACTaGTGCGGCGGCGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNLCAWN*CGGGSL
Trigger: CAGCGAGCCGCCGCCGCAGCAGTTCCAGGCGCAGAG...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTAGGAACAAAAGTGGTGTaGAAACCTGGGACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVGTKVV*KPGTAA
Trigger: GGCTGCTGTCCCAGGTTTGCACACCACTTTTGTTCC...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGGACCCACCTCTAGCATaGCCTGTTCCCAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMDPPLA*PVPKKC
Trigger: GCACTTCTTGGGAACAGGGCATGCTAGAGGTGGGTC...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACGAAGATGGGTGGCCATaGGATTCGGACGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYEDGWP*DSDVAG
Trigger: CCCAGCAACGTCCGAATCCCATGGCCACCCATCTTC...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATTGTCGGCTGGTCAGCTaGCTGTGGTATCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHCRLVS*LWYQEL
Trigger: CAACTCCTGATACCACAGCCAGCTGACCAGCCGACA...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTCTTCCCTCTGTCGGCTaGTCAGCTGGCTGTGGTATC +
Preference number: 4 (lower is better)
Translates to: QVTGTGHSQLELLRGPAALPSVG*SAGCGI
Trigger: GATACCACAGCCAGCTGACCAGCCGACAGAGGGAAG...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTCCGCCCTTGCAGCAGTaGTGCAGGTGCGTTGTCATG +
Preference number: 4 (lower is better)
Translates to: GLPICWVTFSYITPTEVVPPLQQ*CRCVVM
Trigger: CATGACAACGCACCTGCACCACTGCTGCAAGGGCGG...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCGTGTTTACGGGGCTTTaGGGTCCTGCTTTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: SGDRNRTFTIGTLERTSCVFTGL*GPAFPE
Trigger: CTCGGGGAAAGCAGGACCCCAAAGCCCCGTAAACAC...GCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR TCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAACATTGTCTGAGGTCTaGCTGTGGACCCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSTLSEV*LWTPFP
Trigger: TGGGAAAGGGGTCCACAGTCAGACCTCAGACAATGT...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCGTCAAGCCAGCCCCGTaGCCTCCTCCTCTCACCAAT +
Preference number: 4 (lower is better)
Translates to: FTIGTLERTSCYNRKILSVKPAP*PPPLTN
Trigger: ATTGGTGAGAGGAGGAGGTCACGGGGCTGGCTTGAC...GGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACCCTCCACAGGCTCCTaGCCTACACTATCCAATACA +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSPSTGS*PTLSNT
Trigger: TGTATTGGATAGTGTAGGTCAGGAGCCTGTGGAGGG...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACAAGCTGGTCATCAGATaGGGGAAGTCTCAACCTCTC +
Preference number: 4 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHKLVIR*GKSQPL
Trigger: GAGAGGTTGAGACTTCCCTCATCTGATGACCAGCTT...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACACAACTCCATGTCTCCACCTTCTCCCATGGGCAGAAACACTACCCCAGCCTAAATCCTCTTCTTAGCTaGGTACCCTGGGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: TQLHVSTFSHGQKHYPSLNPLLS*VPWAVS
Trigger: GGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATT...TAGGCTGGGGTAGTGTTTCTGCCCATGGGAGAAGGTGGAGACATGGAGTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGACCTTGAAAGCTTCATaGCCCACCTCTAGCATGCCC +
Preference number: 4 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMTLKAS*PTSSMP
Trigger: GGGCATGCTAGAGGTGGGTCATGAAGCTTTCAAGGT...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATAGAACTCGACTGCACTaGTGGGCAAAGGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHRTRLH*WAKASK
Trigger: CTTGGATGCCTTTGCCCAGCAGTGCAGTCGAGTTCT...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAATGGGATTCGGACGTTaGTGGGGAAGTCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: GTGHSQLELLRGPAATTGMGFGR*WGSPAT
Trigger: GGTGGCTGGACTTCCCCAGCAACGTCCGAATCCCAT...TCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATTGTTCAACAGCTGCTTaGTTCCCTCTGTCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHCSTAA*FPLSAG
Trigger: ACCAGCCGACAGAGGGAAGCAAGCAGCTGTTGAACA...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTAATGAGCCACCGTTGTaGAGGAAAGTCCCCACCGCC +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPANEPPL*RKVPTA
Trigger: GGCGGTGGGGACTTTCCTGCACAACGGTGGCTCATT...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCAAAACACAGGCTGCTaGCCCCCGCCCTTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HSQLELLRGPAATTGRFCQNTGC*PPPLQQ
Trigger: CTGCTGCAAGGGCGGGGGGCAGCAGCCTGTGTTTTG...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTAAAGTGGGGGCACAGCTaGATCCTGAGCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVKWGHS*ILSCFN
Trigger: GTTAAAACAGCTCAGGATGCAGCTGTGCCCCCACTT...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCAGGCAATGCCTAAATTaGGCAGGGTCGGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: SGDRNRTFTIGTLERTSCRQCLN*AGSGWN
Trigger: GTTCCAGCCCGACCCTGCGCAATTTAGGCATTGCCT...GCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAGAAGATGGGTGGCCATaGGATTCGGACGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VTGTGHSQLELLRGPAATEDGWP*DSDVAG
Trigger: CCCAGCAACGTCCGAATCCCATGGCCACCCATCTTC...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGAAGATGGGTGGCCATaGGATTCGGACGTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPAEDGWP*DSDVAG
Trigger: CCCAGCAACGTCCGAATCCCATGGCCACCCATCTTC...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGTATGTCTACATTGTCTaGGGTCTGACTGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMYVYIV*GLTVDP
Trigger: GGGGTCCACAGTCAGACCTCAGACAATGTAGACATA...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACTTCTGGCAGTGTAGATaGAGATGGGTGGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYFWQCR*RWVAMG
Trigger: TCCCATGGCCACCCATCTTCATCTACACTGCCAGAA...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACAGAGGCACGGAGGGGATaGAATGTTTTCATCAAGGAC +
Preference number: 4 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTEARRG*NVFIKD
Trigger: GTCCTTGATGAAAACATTTCATCCCCTCCGTGCCTC...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGACTGGCTGTGCGATGCTaGGTATGGAGTCTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRLAVRC*VWSLSA
Trigger: GGCTGACAGACTCCATACTCAGCATCGCACAGCCAG...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACTCCGATCCTAGTGAGTaGGCTTTTAACCTGGCTACA +
Preference number: 4 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHSDPSE*AFNLAT
Trigger: TGTAGCCAGGTTAAAAGCTCACTCACTAGGATCGGA...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCGAGCCTGGCTGGAACTaGGCTTGGGGCTTCAACTCA +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFEPGWN*AWGFNS
Trigger: TGAGTTGAAGCCCCAAGCTCAGTTCCAGCCAGGCTC...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAAAGCTGGTCATCAGATaGGGGAAGTCTCAACCTCTC +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSKLVIR*GKSQPL
Trigger: GAGAGGTTGAGACTTCCCTCATCTGATGACCAGCTT...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAAATCCTCTTCTTAGCTaGGTACCCTGGGCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSNPLLS*VPWAVS
Trigger: GGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATT...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACGGACGCTGTAGGGGCTaGGCTGCTTGTAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNGRCRG*AACRFW
Trigger: CCAAAATCTACAAGCAGCGCAGCCCCTACAGCGTCC...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp ACACAACTCCATGTCTCCACCTTCTCCCATGGGCAGAAACACTACCCCAGCCTACCTGTCTCTCCTGACTaGACTGACCTTTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: TQLHVSTFSHGQKHYPSLPVSPD*TDLFLF
Trigger: GAAAAGGAAAAGGTCAGTGCAGTCAGGAGAGACAGG...TAGGCTGGGGTAGTGTTTCTGCCCATGGGAGAAGGTGGAGACATGGAGTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502486.6
CDS-3UTR GCA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCAATGAGCCACCGTTGTaGAGGAAAGTCCCCACCGCC +
Preference number: 4 (lower is better)
Translates to: GHSQLELLRGPAATTGRFNEPPL*RKVPTA
Trigger: GGCGGTGGGGACTTTCCTGCACAACGGTGGCTCATT...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACACCCTTGCAGCAGTGGTaGAGGTGCGTTGTCATGTAC +
Preference number: 4 (lower is better)
Translates to: VTGTGHSQLELLRGPAATPLQQW*RCVVMY
Trigger: GTACATGACAACGCACCTGCACCACTGCTGCAAGGG...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTGGAACAAAAGTGGTGTaGAAACCTGGGACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QVTGTGHSQLELLRGPAAGTKVV*KPGTAA
Trigger: GGCTGCTGTCCCAGGTTTGCACACCACTTTTGTTCC...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAGACCCACCTCTAGCATaGCCTGTTCCCAAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: VTGTGHSQLELLRGPAATDPPLA*PVPKKC
Trigger: GCACTTCTTGGGAACAGGGCATGCTAGAGGTGGGTC...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGCTGCTTGTAGATTTTaGGGACGCTGGGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: ALDSQVTGTGHSQLELLRAACRF*GRWAPP
Trigger: AGGAGGGGCCCAGCGTCCCCAAAATCTACAAGCAGC...TCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGGCTGCTTGTAGATTTTaGGGACGCTGGGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKAACRF*GRWAPP
Trigger: AGGAGGGGCCCAGCGTCCCCAAAATCTACAAGCAGC...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAAGTCCTCAAGTGGCCCTaGGATGTGGCGGGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQVLKWP*DVAGVQ
Trigger: CTGCACGCCCGCCACATCCCAGGGCCACTTGAGGAC...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTCGAGGGGTTTGGAGTTaGAAAGCTTCCCGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: GLPICWVTFSYITPTEVVRGVWS*KASREQ
Trigger: CTGCTCTCGGGAAGCTTTCCAACTCCAAACCCCTCG...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGCTTCCCTCTGTCGGCTaGTCAGCTGGCTGTGGTATC +
Preference number: 4 (lower is better)
Translates to: VARIHLATCTGPIIPRIKLPSVG*SAGCGI
Trigger: GATACCACAGCCAGCTGACCAGCCGACAGAGGGAAG...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACATACCCCAGCCTACCTTaGGGACTATCTCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TGTGHSQLELLRGPAATTYPSLP*GLSLPR
Trigger: CCTGGGCAGAGATAGTCCCCAAGGTAGGCTGGGGTA...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTCAGATGAGGCTATGGTaGTGTTTTTCTTCTAGCGAA +
Preference number: 4 (lower is better)
Translates to: MPCSQEVQARTLMALACSQMRLW*CFSSSE
Trigger: TTCGCTAGAAGAAAAACACCACCATAGCCTCATCTG...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCATGGCTCTTCTGCTTATaGACCACACCTAGTCACCGA +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSWLFCL*TTPSHR
Trigger: TCGGTGACTAGGTGTGGTCCATAAGCAGAAGAGCCA...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACCTGCTTGCAAAATACTaGTCCCCTCCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYLLAKY*SPPQAP
Trigger: AGGAGCCTGTGGAGGGGACCAGTATTTTGCAAGCAG...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCAAGCCAGGACCCTCATaGCCTTGGCATGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SGDRNRTFTIGTLERTSCKPGPS*PWHALE
Trigger: TTCAAGAGCATGCCAAGGCCATGAGGGTCCTGGCTT...GCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATGCGCAGGGTCGGGCTaGAACAGTGACCTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRCAGSG*NSDLES
Trigger: GCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCA...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp GAATGGGTGCGAGGGAGGAAGAGACCATGTGTAACTTaGGAACAAAAGTGGTGTGCAAACCTGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: EWVRGRKRPCVT*EQKWCANLGQQ
Trigger: CTGCTGTCCCAGGTTTGCACACCACTTTTGTTCCAAAGTTACACATGGTCTCTTCCTCCCTCGCACCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACCCCTTTCCCAATGTaGCAGTGCTCCTGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: VTGTGHSQLELLRGPAATTPFPM*QCSCLS
Trigger: CGAAAGACAGGAGCACTGTCACATTGGGAAAGGGGT...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp TTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCGCCATATTCACTGGCTaGCGAGGGGTTTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: FTIGTLERTSCYNRKILSAIFTG*RGVWSW
Trigger: CCAACTCCAAACCCCTCGTCAGCCAGTGAATATGGC...GGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACACACAATTGGAACTCTTaGGAGGACCAGCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTHNWNS*EDQLLQ
Trigger: TTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTG...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCCTGGCTGTGCGATGCTaGGTATGGAGTCTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LHHRILRRSSLIQKPGQILAVRC*VWSLSA
Trigger: GGCTGACAGACTCCATACTCAGCATCGCACAGCCAG...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCCAGCAGTGTCCACAGTaGTGCTGTATCACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GHSQLELLRGPAATTGRFQQCPQ*CCITAS
Trigger: TGAGGCCGTGATACAGCATCACTGTGGACACTGCTG...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGCAGCAGTGTCCACAGTaGTGCTGTATCACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VARIHLATCTGPIIPRIKQQCPQ*CCITAS
Trigger: TGAGGCCGTGATACAGCATCACTGTGGACACTGCTG...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCCATTCCAAAGTGTTaGTGGGCTTTGAGAACTGTG +
Preference number: 4 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVSIPKC*WALRTV
Trigger: CACAGTTCTCAAAGCCCATCAACACTTTGGAATGGA...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACACAACTCCATGTCTCCACCTTCTCCCATGGGCAGAAACACTACCCCAGCCTATCCATTCCAAAGTGTTaGTGGGCTTTGAGAACTGTG +
Preference number: 4 (lower is better)
Translates to: TQLHVSTFSHGQKHYPSLSIPKC*WALRTV
Trigger: CACAGTTCTCAAAGCCCATCAACACTTTGGAATGGA...TAGGCTGGGGTAGTGTTTCTGCCCATGGGAGAAGGTGGAGACATGGAGTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTAGAACTCGACTGCACTaGTGGGCAAAGGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPARTRLH*WAKASK
Trigger: CTTGGATGCCTTTGCCCAGCAGTGCAGTCGAGTTCT...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTATGGGATTCGGACGTTaGTGGGGAAGTCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: HSQLELLRGPAATTGRFCMGFGR*WGSPAT
Trigger: GGTGGCTGGACTTCCCCAGCAACGTCCGAATCCCAT...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACTGTTCAACAGCTGCTTaGTTCCCTCTGTCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNCSTAA*FPLSAG
Trigger: ACCAGCCGACAGAGGGAAGCAAGCAGCTGTTGAACA...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp TCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCACCCTTGCAGCAGTGGTaGAGGTGCGTTGTCATGTAC +
Preference number: 4 (lower is better)
Translates to: SQLELLRGPAATTGRFCPPLQQW*RCVVMY
Trigger: GTACATGACAACGCACCTGCACCACTGCTGCAAGGG...TGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTTGTGACTTTAGTAACTaGTTGCAAAATACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: MPCSQEVQARTLMALACSCDFSN*LQNTGP
Trigger: GGGACCAGTATTTTGCAAGCAGTTACTAAAGTCACA...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACATCTCCCTGCATTTTTaGACTAGGAACCTATGGGAC +
Preference number: 4 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHISLHF*TRNLWD
Trigger: GTCCCATAGGTTCCTAGTGCAAAAATGCAGGGAGAT...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGCCTGTTCCCAAGAAGTaGAAGCCAGGACCCTCATGG +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKPVPKK*KPGPSW
Trigger: CCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGG...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCAGGCAATGCCTAAATTaGGCAGGGTCGGGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: GHSQLELLRGPAATTGRFRQCLN*AGSGWN
Trigger: GTTCCAGCCCGACCCTGCGCAATTTAGGCATTGCCT...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACGCCCCGGTGTTAGGCTaGTACATGAAGTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNAPVLG*YMKFQR
Trigger: TCTCTGGAACTTCATGTAGCAGCCTAACACCGGGGC...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGGGGATCCGGGATCTaGCTACGGCGAGACTTTAGA +
Preference number: 4 (lower is better)
Translates to: GHSQLELLRGPAATTGRFWGSGI*LRRDFR
Trigger: TCTAAAGTCTCGCCGTAGCCAGATCCCGGATCCCCA...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGGCCGGAGTCCTCAAGTaGCCCTGGGATGTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: FNLENTGQLSLFVGMALLAGVLK*PWDVAG
Trigger: GCCCGCCACATCCCAGGGCCACTTGAGGACTCCGGC...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGACGAGGGGTTTGGAGTTaGAAAGCTTCCCGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRRGVWS*KASREQ
Trigger: CTGCTCTCGGGAAGCTTTCCAACTCCAAACCCCTCG...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAGATGGCCATATTCACTaGCTGACGAGGGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VTGTGHSQLELLRGPAATDGHIH*LTRGLE
Trigger: CTCCAAACCCCTCGTCAGCCAGTGAATATGGCCATC...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGTCCACGTCGGCCAGATaGCCATATTCACTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKSTSAR*PYSLAD
Trigger: GTCAGCCAGTGAATATGGCCATCTGGCCGACGTGGA...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACATCCACGTCGGCCAGATaGCCATATTCACTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: TGTGHSQLELLRGPAATTSTSAR*PYSLAD
Trigger: GTCAGCCAGTGAATATGGCCATCTGGCCGACGTGGA...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp TTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCTGTCGGCTGGTCAGCTaGCTGTGGTATCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: FTIGTLERTSCYNRKILSCRLVS*LWYQEL
Trigger: CAACTCCTGATACCACAGCCAGCTGACCAGCCGACA...GGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp GGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAGAGAGCCAAAGAGACTaGTCTCATGGCTGCCGTAAG +
Preference number: 4 (lower is better)
Translates to: GTGHSQLELLRGPAATTGESQRD*SHGCRK
Trigger: CTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTC...TCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATATGATTAACCTGGAATaGGTGCGAGGGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHMINLE*VRGRKR
Trigger: TCTCTTCCTCCCTCGCACCCATTCCAGGTTAATCAT...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTGTATCACGGCCTCAGTaGCGGCTAGTGCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCVSRPQ*RLVPAS
Trigger: TGACGCAGGCACTAGCCGCCACTGAGGCCGTGATAC...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCGCTCAAGGGGCAGTGTaGATATGTCCCAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFAQGAV*ICPKER
Trigger: CCTCTCCTTGGGACATATCCACACTGCCCCTTGAGC...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGAGTGAGCTTTTAACCTaGCTACACAGAGGCCCAATG +
Preference number: 4 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMSELLT*LHRGPM
Trigger: CATTGGGCCTCTGTGTAGCCAGGTTAAAAGCTCACT...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTCAAGAAATCATGGACTaGGAATGGTTGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QVTGTGHSQLELLRGPAAQEIMD*EWLESR
Trigger: CCTGGACTCCAACCATTCTCAGTCCATGATTTCTTG...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCACCCCTTTCCCAATGTaGCAGTGCTCCTGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFTPFPM*QCSCLS
Trigger: CGAAAGACAGGAGCACTGTCACATTGGGAAAGGGGT...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAACATTGTCTGAGGTCTaGCTGTGGACCCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: TGTGHSQLELLRGPAATTTLSEV*LWTPFP
Trigger: TGGGAAAGGGGTCCACAGTCAGACCTCAGACAATGT...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGACATTGTCTGAGGTCTaGCTGTGGACCCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKTLSEV*LWTPFP
Trigger: TGGGAAAGGGGTCCACAGTCAGACCTCAGACAATGT...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGGCAGTGTAGATaGAGATGGGTGGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRFWQCR*RWVAMG
Trigger: TCCCATGGCCACCCATCTTCATCTACACTGCCAGAA...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp GGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGATTTCCCAAGGCCGCATaGGTACTTAAGCTCATCGGT +
Preference number: 4 (lower is better)
Translates to: GTGHSQLELLRGPAATTGFPKAA*VLKLIG
Trigger: ACCGATGAGCTTAAGTACTCATGCGGCCTTGGGAAA...TCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACTTTCCCAAGGCCGCATaGGTACTTAAGCTCATCGGT +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNFPKAA*VLKLIG
Trigger: ACCGATGAGCTTAAGTACTCATGCGGCCTTGGGAAA...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACGATCCCTTCATAAAATaGGCCACCGTTGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYDPFIK*ATVVQE
Trigger: TTCCTGCACAACGGTGGCTCATTTTATGAAGGGATC...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCGGGTACTGTGGCAGCTaGGAATGTGTAGACTATGGC +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFGYCGS*ECVDYG
Trigger: GCCATAGTCTACACATTCTCAGCTGCCACAGTACCC...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCTGCAGACGACCACCGTaGACTTACGTACATACCAGC +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFCRRPP*TYVHTS
Trigger: GCTGGTATGTACGTAAGTTCACGGTGGTCGTCTGCA...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACTCCGATCCTAGTGAGTaGGCTTTTAACCTGGCTACA +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYSDPSE*AFNLAT
Trigger: TGTAGCCAGGTTAAAAGCTCACTCACTAGGATCGGA...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCAGGCTCACAGAGCAATaGCAGCATCCGATCCTAGTG +
Preference number: 4 (lower is better)
Translates to: GHSQLELLRGPAATTGRFRLTEQ*QHPILV
Trigger: CACTAGGATCGGATGCTGTCATTGCTCTGTGAGCCT...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AGCAGAGGAGTTAGAACTGGCTGTGCGATGCTGAGTATGGAGTCTGTCAGCCTTTCCAAGGATTTCAACTaGAAGGCTCACAGAGCAATG +
Preference number: 4 (lower is better)
Translates to: SRGVRTGCAMLSMESVSLSKDFN*KAHRAM
Trigger: CATTGCTCTGTGAGCCTTTCAGTTGAAATCCTTGGA...AAGGCTGACAGACTCCATACTCAGCATCGCACAGCCAGTTCTAACTCCTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACACCCTCCACAGGCTCCTaGCCTACACTATCCAATACA +
Preference number: 4 (lower is better)
Translates to: TGTGHSQLELLRGPAATTPSTGS*PTLSNT
Trigger: TGTATTGGATAGTGTAGGTCAGGAGCCTGTGGAGGG...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTGGACGCTGTAGGGGCTaGGCTGCTTGTAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: RTFTIGTLERTSCYNRKIGRCRG*AACRFW
Trigger: CCAAAATCTACAAGCAGCGCAGCCCCTACAGCGTCC...AATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp GCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAAGAACTCGACTGCACTaGTGGGCAAAGGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: ALDSQVTGTGHSQLELLRRTRLH*WAKASK
Trigger: CTTGGATGCCTTTGCCCAGCAGTGCAGTCGAGTTCT...TCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTCAGCCACCTAATGTATaGACAGGAGAGGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: QVTGTGHSQLELLRGPAAQPPNV*TGEVDR
Trigger: TCTGTCAACCTCTCCTGTGCATACATTAGGTGGCTG...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp TCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCAGGAGTTGGTTGTGGTaGTGCAGAACCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SGDRNRTFTIGTLERTSCRSWLW*CRTIFK
Trigger: CTTGAAGATGGTTCTGCAGCACCACAACCAACTCCT...GCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATGTTCAACAGCTGCTTaGTTCCCTCTGTCGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRCSTAA*FPLSAG
Trigger: ACCAGCCGACAGAGGGAAGCAAGCAGCTGTTGAACA...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAGGGTTGGAGGTACAATaGATCCTAATGAATTCTCGG +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSGLEVQ*ILMNSR
Trigger: CCGAGAATTCATTAGGATGCATTGTACCTCCAACCC...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502486.6
CDS-3UTR GCA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTGTCCATTTAGCCCTTTaGTCTACAAAGAATGTAGTA +
Preference number: 4 (lower is better)
Translates to: MPCSQEVQARTLMALACSVHLAL*STKNVV
Trigger: TACTACATTCTTTGTAGAGCAAAGGGCTAAATGGAC...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCGCCATGGAGCAGGGGTaGAGAAAGTGCTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIAMEQG*RKCSHQ
Trigger: CTGATGAGAGCACTTTCTGCACCCCTGCTCCATGGC...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACAGGCCCAATGGGCCTTaGCAAAATACAAATGAACAT +
Preference number: 4 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHRPNGP*QNTNEH
Trigger: ATGTTCATTTGTATTTTGGCAAGGCCCATTGGGCCT...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAAGTGGGGGCACAGCTaGATCCTGAGCTGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: GTGHSQLELLRGPAATTGKWGHS*ILSCFN
Trigger: GTTAAAACAGCTCAGGATGCAGCTGTGCCCCCACTT...TCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATATCTCCCTGCATTTTTaGACTAGGAACCTATGGGAC +
Preference number: 4 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHISLHF*TRNLWD
Trigger: GTCCCATAGGTTCCTAGTGCAAAAATGCAGGGAGAT...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCAACTCGACTGCACTGCTaGGCAAAGGCATCCAAGATC +
Preference number: 4 (lower is better)
Translates to: SQLELLRGPAATTGRFCPTRLHC*AKASKI
Trigger: GATCTTGGATGCCTTTGCCCAGCAGTGCAGTCGAGT...TGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGGATGGCCATATTCACTaGCTGACGAGGGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKDGHIH*LTRGLE
Trigger: CTCCAAACCCCTCGTCAGCCAGTGAATATGGCCATC...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTTCCACGTCGGCCAGATaGCCATATTCACTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: HSQLELLRGPAATTGRFCSTSAR*PYSLAD
Trigger: GTCAGCCAGTGAATATGGCCATCTGGCCGACGTGGA...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACTGTGGTATCAGGAGTTaGTTGTGGTGCTGCAGAACC +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNCGIRS*LWCCRT
Trigger: GGTTCTGCAGCACCACAACCAACTCCTGATACCACA...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp AGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTTGTCGGCTGGTCAGCTaGCTGTGGTATCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: RTFTIGTLERTSCYNRKICRLVS*LWYQEL
Trigger: CAACTCCTGATACCACAGCCAGCTGACCAGCCGACA...AATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCTGTCATGTACGGCCATaGAGCAGGGGTGCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFCHVRP*SRGAES
Trigger: ACTTTCTGCACCCCTGCTCCATGGCCGTACATGACA...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp TTGGACTCTCAGGTGACAGGAACAGGACATTCACAATaGGAACTCTTGAGAGGACCAGCTGCTACAACAGGA +
Preference number: 4 (lower is better)
Translates to: LDSQVTGTGHSQ*ELLRGPAATTG
Trigger: TCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp ATAAAAGAACCAGTGCCACTGGCTGACAGTGTAACTTaGCAGAGGACTACCCATCTGCTGGGTGACGTTTTC +
Preference number: 4 (lower is better)
Translates to: IKEPVPLADSVT*QRTTHLLGDVF
Trigger: GAAAACGTCACCCAGCAGATGGGTAGTCCTCTGCAAAGTTACACTGTCAGCCAGTGGCACTGGTTCTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTTTCCCAAGGCCGCATaGGTACTTAAGCTCATCGGT +
Preference number: 4 (lower is better)
Translates to: GHSQLELLRGPAATTGRFFPKAA*VLKLIG
Trigger: ACCGATGAGCTTAAGTACTCATGCGGCCTTGGGAAA...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp TCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCAGACCGACAGCGTCGCTaGACACTTTGTTTATCTGCT +
Preference number: 4 (lower is better)
Translates to: SQLELLRGPAATTGRFCPDRQRR*TLCLSA
Trigger: AGCAGATAAACAAAGTGTTCAGCGACGCTGTCGGTC...TGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCGACCGACAGCGTCGCTaGACACTTTGTTTATCTGCT +
Preference number: 4 (lower is better)
Translates to: GHSQLELLRGPAATTGRFDRQRR*TLCLSA
Trigger: AGCAGATAAACAAAGTGTTCAGCGACGCTGTCGGTC...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGCTTTGGACTCTCAGGTaGCAGGAACAGGACATTCAC +
Preference number: 4 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRLWTLR*QEQDIH
Trigger: GTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAG...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGCTTTGGACTCTCAGGTaGCAGGAACAGGACATTCAC +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKLWTLR*QEQDIH
Trigger: GTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAG...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTGGGTACTGTGGCAGCTaGGAATGTGTAGACTATGGC +
Preference number: 4 (lower is better)
Translates to: HSQLELLRGPAATTGRFCGYCGS*ECVDYG
Trigger: GCCATAGTCTACACATTCTCAGCTGCCACAGTACCC...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGAGGCACGGAGGGGATaGAATGTTTTCATCAAGGAC +
Preference number: 4 (lower is better)
Translates to: ALDSQVTGTGHSQLELLREARRG*NVFIKD
Trigger: GTCCTTGATGAAAACATTTCATCCCCTCCGTGCCTC...TCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGAAAGAAAGCCTCTCCTaGGTCCAAACAGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKKESLS*VQTGSP
Trigger: AGGGCTTCCTGTTTGGACTCAGGAGAGGCTTTCTTT...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACTCCAAGGATTTCAACTaGAAGGCTCACAGAGCAATG +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYSKDFN*KAHRAM
Trigger: CATTGCTCTGTGAGCCTTTCAGTTGAAATCCTTGGA...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACACAACTCCATGTCTCCACCTTCTCCCATGGGCAGAAACACTACCCCAGCCTAAGGATGGAATCTAAATaGGGACAATGGATGTTTGCT +
Preference number: 4 (lower is better)
Translates to: TQLHVSTFSHGQKHYPSLRMESK*GQWMFA
Trigger: AGCAAACATCCATTGTCCTCATTTAGATTCCATCCT...TAGGCTGGGGTAGTGTTTCTGCCCATGGGAGAAGGTGGAGACATGGAGTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACAGGATGGAATCTAAATaGGGACAATGGATGTTTGCT +
Preference number: 4 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHRMESK*GQWMFA
Trigger: AGCAAACATCCATTGTCCTCATTTAGATTCCATCCT...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACCGCAGATCTGTACTGTaGAATGACACAGCACTGAAT +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYRRSVL*NDTALN
Trigger: ATTCAGTGCTGTGTCATTTCACAGTACAGATCTGCG...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTTATCCAGCACTTACATaGCTGAAAGCAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: QVTGTGHSQLELLRGPAAYPALT*LKAAIT
Trigger: AGTGATGGCTGCTTTCAGTCATGTAAGTGCTGGATA...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGATACCCATCTGCTGGGTaGCGTTTTCCTACATTACTC +
Preference number: 4 (lower is better)
Translates to: GTGHSQLELLRGPAATTGYPSAG*RFPTLL
Trigger: GAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTA...TCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACGCACTCCATGTTGTCTaGTGTCAATTCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYALHVV*CQFFTL
Trigger: GAGAGTGAAGAATTGACATCAGACAACATGGAGTGC...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGACATATTGTGGCGTGTaGAAGTGGTCTCTAATGTGT +
Preference number: 4 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMTYCGV*KWSLMC
Trigger: ACACATTAGAGACCACTTTCACACGCCACAATATGT...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCACCTTGAAAGCTTCATaGCCCACCTCTAGCATGCCC +
Preference number: 4 (lower is better)
Translates to: LHHRILRRSSLIQKPGQITLKAS*PTSSMP
Trigger: GGGCATGCTAGAGGTGGGTCATGAAGCTTTCAAGGT...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACACAGCCACCTAATGTATaGACAGGAGAGGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: VTGTGHSQLELLRGPAATQPPNV*TGEVDR
Trigger: TCTGTCAACCTCTCCTGTGCATACATTAGGTGGCTG...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTAGTGAAATAACCTCCTaGTCCAGCTCTTGGCATCGA +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPASEITS*SSSWHR
Trigger: TCGATGCCAAGAGCTGGAGCAGGAGGTTATTTCACT...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTCTTGAGAGGACCAGCTaGTACAACAGGAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPALERTS*YNRKIL
Trigger: CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAG...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAAGGCCCAATGGGCCTTaGCAAAATACAAATGAACAT +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSRPNGP*QNTNEH
Trigger: ATGTTCATTTGTATTTTGGCAAGGCCCATTGGGCCT...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGTCATTCTGCTTCCTATaGCCAAAGCAATCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMSFCFL*PKQSSS
Trigger: AGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGA...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTATGGTGGTGTTTTTCTTCTAGCGAAGATGTCATGTTGTCAAAGAATCTTATAGTCGCTCGTAGCGCTTaGCCAGCGCCGGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: LWWCFSSSEDVMLSKNLIVARSA*PAPVSC
Trigger: GCAAGAGACCGGCGCTGGCCAAGCGCTACGAGCGAC...TATAAGATTCTTTGACAACATGACATCTTCGCTAGAAGAAAAACACCACCATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTACTCGACTGCACTGCTaGGCAAAGGCATCCAAGATC +
Preference number: 4 (lower is better)
Translates to: KTELVILLPMPKAILFLATRLHC*AKASKI
Trigger: GATCTTGGATGCCTTTGCCCAGCAGTGCAGTCGAGT...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCGATGGCCATATTCACTaGCTGACGAGGGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIDGHIH*LTRGLE
Trigger: CTCCAAACCCCTCGTCAGCCAGTGAATATGGCCATC...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGGTAGATGAAGATGGGTaGCCATGGGATTCGGACGTT +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKVDEDG*PWDSDV
Trigger: AACGTCCGAATCCCATGGCCACCCATCTTCATCTAC...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACATCAGGAGTTGGTTGTaGTGCTGCAGAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNIRSWL*CCRTIF
Trigger: GAAGATGGTTCTGCAGCACCACAACCAACTCCTGAT...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTGGTATCAGGAGTTaGTTGTGGTGCTGCAGAACC +
Preference number: 4 (lower is better)
Translates to: GHSQLELLRGPAATTGRFCGIRS*LWCCRT
Trigger: GGTTCTGCAGCACCACAACCAACTCCTGATACCACA...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp TCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCGCATGTTACTTTAACTaGATCCAGAGGGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SGDRNRTFTIGTLERTSCACYFN*IQRASF
Trigger: GAAAGACGCCCTCTGGATCCAGTTAAAGTAACATGC...GCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000611697.1
CDS-3UTR CCA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATAGAATGTGTAGACTATaGCAGAATGACAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHRMCRL*QNDRLW
Trigger: CCAAAGCCTGTCATTCTGCCATAGTCTACACATTCT...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGTGAGCTTTTAACCTaGCTACACAGAGGCCCAATG +
Preference number: 4 (lower is better)
Translates to: GTGHSQLELLRGPAATTGSELLT*LHRGPM
Trigger: CATTGGGCCTCTGTGTAGCCAGGTTAAAAGCTCACT...TCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCTCTCACCAATTAAGTaGGGGCACAGCTGCATCCTG +
Preference number: 4 (lower is better)
Translates to: HSQLELLRGPAATTGRFCLSPIK*GHSCIL
Trigger: CAGGATGCAGCTGTGCCCCCACTTAATTGGTGAGAG...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATGGCTCTTCTGCTTATaGACCACACCTAGTCACCGA +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRWLFCL*TTPSHR
Trigger: TCGGTGACTAGGTGTGGTCCATAAGCAGAAGAGCCA...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACGGACTACCCATCTGCTaGGTGACGTTTTCCTACATT +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNGLPIC*VTFSYI
Trigger: AATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTTGGCCAGGATACATCTaGCCACTTGTACTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: HSQLELLRGPAATTGRFCWPGYI*PLVLAQ
Trigger: TTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCA...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGGGAGGGGCTAGTCGTTaGGGCGGGGTCGTCAGAGTA +
Preference number: 4 (lower is better)
Translates to: FNLENTGQLSLFVGMALLGGASR*GGVVRV
Trigger: TACTCTGACGACCCCGCCCCAACGACTAGCCCCTCC...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR TCA 90 bp CACATTAAACATACACCAGCAAGACTTGCACCATATGTGCAAAATCATTTTCTAGCCCGAGCTCCTGATTaGCAGGCTGCCTCGCCAATG +
Preference number: 4 (lower is better)
Translates to: HIKHTPARLAPYVQNHFLARAPD*QAASPM
Trigger: CATTGGCGAGGCAGCCTGTCAATCAGGAGCTCGGGC...TAGAAAATGATTTTGCACATATGGTGCAAGTCTTGCTGGTGTATGTTTAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCCAAGAAATCATGGACTaGGAATGGTTGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FTIGTLERTSCYNRKILSQEIMD*EWLESR
Trigger: CCTGGACTCCAACCATTCTCAGTCCATGATTTCTTG...GGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTTCTTTCGTTGTAACTTaGGCCTTCCTGCTTTACGCA +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPASFVVT*AFLLYA
Trigger: TGCGTAAAGCAGGAAGGCTCAAGTTACAACGAAAGA...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACTCTTTCGTTGTAACTTaGGCCTTCCTGCTTTACGCA +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNSFVVT*AFLLYA
Trigger: TGCGTAAAGCAGGAAGGCTCAAGTTACAACGAAAGA...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTTATGTCTACATTGTCTaGGGTCTGACTGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: HSQLELLRGPAATTGRFCYVYIV*GLTVDP
Trigger: GGGGTCCACAGTCAGACCTCAGACAATGTAGACATA...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp TCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCACACAATTGGAACTCTTaGGAGGACCAGCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: SQLELLRGPAATTGRFCPHNWNS*EDQLLQ
Trigger: TTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTG...TGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACCTTTGCCGAGAAATATaGAGTCAAGTCTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHLCREI*SQVFGK
Trigger: TTTTCCAAAGACTTGACTTCATATTTCTCGGCAAAG...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTAAAGAAAGCCTCTCCTaGGTCCAAACAGGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: KTELVILLPMPKAILFLAKESLS*VQTGSP
Trigger: AGGGCTTCCTGTTTGGACTCAGGAGAGGCTTTCTTT...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAGGATGCTCATTAACCTaGATCTCCAACCAATTTTCA +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSGCSLT*ISNQFS
Trigger: TGAAAATTGGTTGGAGATTCAGGTTAATGAGCATCC...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGATCATTGAGCAGATCTaGCAGATGACCACCTCCATA +
Preference number: 4 (lower is better)
Translates to: GFGLSGDRNRTFTIGTLEIIEQI*QMTTSI
Trigger: TATGGAGGTGGTCATCTGTCAGATCTGCTCAATGAT...CTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATAGATGGAAAAACAGATaGGGCTATGGTGGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHRWKNR*GYGGVF
Trigger: AAAAACACCACCATAGCCTCATCTGTTTTTCCATCT...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTAGGCTCACAGAGCAATaGCAGCATCCGATCCTAGTG +
Preference number: 4 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCRLTEQ*QHPILV
Trigger: CACTAGGATCGGATGCTGTCATTGCTCTGTGAGCCT...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCGGCACAGCTGCATCCTaGGCTGTTTTAACTCAATCT +
Preference number: 4 (lower is better)
Translates to: FTIGTLERTSCYNRKILSGTAAS*AVLTQS
Trigger: AGATTGAGTTAAAACAGCTCAGGATGCAGCTGTGCC...GGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCCTAACTCTACAGCCGTaGAGTAGCTACAAATATGTC +
Preference number: 4 (lower is better)
Translates to: SGDRNRTFTIGTLERTSCLTLQP*SSYKYV
Trigger: GACATATTTGTAGCTACTTCACGGCTGTAGAGTTAG...GCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTCAGCACTTACATGACTaGAAGCAGCCATCACTATGT +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPAQHLHD*KQPSLC
Trigger: ACATAGTGATGGCTGCTTTCAGTCATGTAAGTGCTG...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCACTCCATGTTGTCTaGTGTCAATTCTTCACTCTC +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPAALHVV*CQFFTL
Trigger: GAGAGTGAAGAATTGACATCAGACAACATGGAGTGC...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGGCAGTTAAGTGGTTCTaGACGGGCCCAAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: GFGLSGDRNRTFTIGTLEAVKWF*TGPNSF
Trigger: AAAACTATTTGGGCCCGTTCAGAACCACTTAACTGC...CTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCAGGAGTTGGTTGTGGTaGTGCAGAACCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFRSWLW*CRTIFK
Trigger: CTTGAAGATGGTTCTGCAGCACCACAACCAACTCCT...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGACCTGTCTCTCCTGACTaGACTGACCTTTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRPVSPD*TDLFLF
Trigger: GAAAAGGAAAAGGTCAGTGCAGTCAGGAGAGACAGG...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000611697.1
CDS-3UTR GCA 90 bp AGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAACACTTTGTTTATCTaGTCTTCCGAGGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: RNRTFTIGTLERTSCYNRNTLFI*SSEGIH
Trigger: GTGGATGCCCTCGGAAGAGCAGATAAACAAAGTGTT...CCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAACACTTTGTTTATCTaGTCTTCCGAGGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNNTLFI*SSEGIH
Trigger: GTGGATGCCCTCGGAAGAGCAGATAAACAAAGTGTT...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGACTTGAGAGGACCAGCTaGTACAACAGGAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRLERTS*YNRKIL
Trigger: CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAG...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAAAGTCTGTTGTAGGTaGCACAGACTTCCCAAACAA +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYKVCCR*HRLPKQ
Trigger: TTGTTTGGGAAGTCTGTGGCACCTACAACAGACTTT...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATCAGGGGTGCAGAAAGTaGTCTCATCAGCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNQGCRK*SHQPQR
Trigger: TCGCTGAGGCTGATGAGAGCACTTTCTGCACCCCTG...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GGCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGTCTGTCAGCCTTGTaGAAAAGAGATGCCCAACAA +
Preference number: 4 (lower is better)
Translates to: GFGLSGDRNRTFTIGTLESLSAL*KRDAQQ
Trigger: TTGTTGGGCATCTCTTTTGCACAAGGCTGACAGACT...CTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACACTTTAGTAACTGCTTaGAAAATACTGGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYTLVTA*KILVPS
Trigger: GGAGGGGACCAGTATTTTGCAAGCAGTTACTAAAGT...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTAGGGATAAGGAACAATaGAGAATACCCGATCACCCA +
Preference number: 4 (lower is better)
Translates to: GLPICWVTFSYITPTEVVRDKEQ*RIPDHP
Trigger: TGGGTGATCGGGTATTCTGCATTGTTCCTTATCCCT...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAGTTCTGGCACGTGTTaGCACATTAAACATACACCA +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYSSGTC*HIKHTP
Trigger: TGGTGTATGTTTAATGTGGCAACACGTGCCAGAACT...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGCTACCAATCGGGAATTaGTCTCCGATCCTTCTGAAA +
Preference number: 4 (lower is better)
Translates to: RNRTFTIGTLERTSCYNRLPIGN*SPILLK
Trigger: TTTCAGAAGGATCGGAGAGCAATTCCCGATTGGTAG...CCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR CCA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAATTAGAGACCCAGATGTaGACTCGAGGCTTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQLETQM*TRGFCG
Trigger: GCCGCAGAAGCCTCGAGTCCACATCTGGGTCTCTAA...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGGTAGATGAAGATGGGTaGCCATGGGATTCGGACGTT +
Preference number: 4 (lower is better)
Translates to: TFTIGTLERTSCYNRKILVDEDG*PWDSDV
Trigger: AACGTCCGAATCCCATGGCCACCCATCTTCATCTAC...CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAAAACAGATGAGGCTATaGTGGTGTTTTTCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSKQMRL*WCFSSS
Trigger: GCTAGAAGAAAAACACCACCATAGCCTCATCTGTTT...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGACTTTGGAACAAAAGTaGTGTGCAAACCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: RNRTFTIGTLERTSCYNRTLEQK*CANLGQ
Trigger: CTGTCCCAGGTTTGCACACCACTTTTGTTCCAAAGT...CCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GTTGTAGGTGCCACAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTGGGTTGGCCAGGATACATCTaGCCACTTGTACTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: VVGATDFPNNPKMDFYLGWPGYI*PLVLAQ
Trigger: TTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCA...ACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTGTGGCACCTACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCAATAGTTTTCCAATGTaGCCAGGATACATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SGDRNRTFTIGTLERTSCNSFPM*PGYIWP
Trigger: TGGCCAGATGTATCCTGGCCACATTGGAAAACTATT...GCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTAAGCCAGGACCCTCATaGCCTTGGCATGCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCKPGPS*PWHALE
Trigger: TTCAAGAGCATGCCAAGGCCATGAGGGTCCTGGCTT...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTGCGCAGGGTCGGGCTaGAACAGTGACCTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCCAGSG*NSDLES
Trigger: GCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCA...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTaGAGAGGACCAGCTGCTACAACAGGAAGATTCTGT +
Preference number: 4 (lower is better)
Translates to: QVTGTGHSQLEL*RGPAATTGRFC
Trigger: ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
3UTR CAA 72 bp TCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTaGCAAAATACTGGTCCCCTCCACAGGCTCCTGACC +
Preference number: 4 (lower is better)
Translates to: SRVSEKCDFSNC*QNTGPLHRLLT
Trigger: GGTCAGGAGCCTGTGGAGGGGACCAGTATTTTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTCTTTCGTTGTAACTTaGGCCTTCCTGCTTTACGCA +
Preference number: 4 (lower is better)
Translates to: GHSQLELLRGPAATTGRFSFVVT*AFLLYA
Trigger: TGCGTAAAGCAGGAAGGCTCAAGTTACAACGAAAGA...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAAACCCCTTTCCCAATGTaGCAGTGCTCCTGTCTTTCG +
Preference number: 4 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQTPFPM*QCSCLS
Trigger: CGAAAGACAGGAGCACTGTCACATTGGGAAAGGGGT...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACTTTGTAGAGAGTCAGTaGAAACCCTCAAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNFVESQ*KPSKRQ
Trigger: CTGCCTTTTTGAGGGTTTTCACTGACTCTCTACAAA...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATTTCTGGCAGTGTAGATaGAGATGGGTGGCCATGGGA +
Preference number: 4 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNFWQCR*RWVAMG
Trigger: TCCCATGGCCACCCATCTTCATCTACACTGCCAGAA...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACACCTGGGAACTTTTATTaGAGACTTCATCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: VTGTGHSQLELLRGPAATPGNFY*RLHPEK
Trigger: CTTCTCAGGATGAAGTCTTCAATAAAAGTTCCCAGG...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp GGCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGTTGTCAGAATCGCCTTaGAGCTGTGTGTATACAATG +
Preference number: 4 (lower is better)
Translates to: GFGLSGDRNRTFTIGTLELSESP*SCVYTM
Trigger: CATTGTATACACACAGCTTCAAGGCGATTCTGACAA...CTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGATCCTTTGTTGGTCCTaGTTTAAACAAGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: GFGLSGDRNRTFTIGTLEILCWS*FKQEET
Trigger: GGTCTCCTCTTGTTTAAATCAGGACCAACAAAGGAT...CTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTGGCACAGCTGCATCCTaGGCTGTTTTAACTCAATCT +
Preference number: 4 (lower is better)
Translates to: HSQLELLRGPAATTGRFCGTAAS*AVLTQS
Trigger: AGATTGAGTTAAAACAGCTCAGGATGCAGCTGTGCC...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTATGGTGGTGTTTTTCTTCTAGCGAAGATGTCATGTTGTCAAAGAATCTTATAGTCAAGCCAGCCCCGTaGCCTCCTCCTCTCACCAAT +
Preference number: 4 (lower is better)
Translates to: LWWCFSSSEDVMLSKNLIVKPAP*PPPLTN
Trigger: ATTGGTGAGAGGAGGAGGTCACGGGGCTGGCTTGAC...TATAAGATTCTTTGACAACATGACATCTTCGCTAGAAGAAAAACACCACCATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCGAGGCAACAAGCCATTaGGAGCGGCAGGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCEATSH*ERQGNV
Trigger: TACATTCCCCTGCCGCTCTCAATGGCTTGTTGCCTC...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTTGTAGGTGCCACAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTGGGTTCTCCATCTGTTTTCTaGGAGCAACAGAAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VVGATDFPNNPKMDFYLGSPSVF*EQQKGG
Trigger: GCCTCCCTTCTGTTGCTCTCAGAAAACAGATGGAGA...ACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTGTGGCACCTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTGGATGTTTGCTTTTCTaGACATATAGTGCACGTTTC +
Preference number: 4 (lower is better)
Translates to: QVTGTGHSQLELLRGPAAGCLLF*TYSARF
Trigger: GAAACGTGCACTATATGTTCAGAAAAGCAAACATCC...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCACGCAGATCTGTACTGTaGAATGACACAGCACTGAAT +
Preference number: 4 (lower is better)
Translates to: SQLELLRGPAATTGRFCPRRSVL*NDTALN
Trigger: ATTCAGTGCTGTGTCATTTCACAGTACAGATCTGCG...TGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACACAGCACTTACATGACTaGAAGCAGCCATCACTATGT +
Preference number: 4 (lower is better)
Translates to: TGTGHSQLELLRGPAATTQHLHD*KQPSLC
Trigger: ACATAGTGATGGCTGCTTTCAGTCATGTAAGTGCTG...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGTATCCAGCACTTACATaGCTGAAAGCAGCCATCACT +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKYPALT*LKAAIT
Trigger: AGTGATGGCTGCTTTCAGTCATGTAAGTGCTGGATA...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTTACCCATCTGCTGGGTaGCGTTTTCCTACATTACTC +
Preference number: 4 (lower is better)
Translates to: KTELVILLPMPKAILFLAYPSAG*RFPTLL
Trigger: GAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTA...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTACATATTGTGGCGTGTaGAAGTGGTCTCTAATGTGT +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPATYCGV*KWSLMC
Trigger: ACACATTAGAGACCACTTTCACACGCCACAATATGT...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGCAGTTAAGTGGTTCTaGACGGGCCCAAATAGTTTT +
Preference number: 4 (lower is better)
Translates to: ALDSQVTGTGHSQLELLRAVKWF*TGPNSF
Trigger: AAAACTATTTGGGCCCGTTCAGAACCACTTAACTGC...TCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTCAGCCACCTAATGTATaGACAGGAGAGGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: KTELVILLPMPKAILFLAQPPNV*TGEVDR
Trigger: TCTGTCAACCTCTCCTGTGCATACATTAGGTGGCTG...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTAGTGAAATAACCTCCTaGTCCAGCTCTTGGCATCGA +
Preference number: 4 (lower is better)
Translates to: HSQLELLRGPAATTGRFCSEITS*SSSWHR
Trigger: TCGATGCCAAGAGCTGGAGCAGGAGGTTATTTCACT...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp ACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGAGGAGTTGGTTGTGGTaGTGCAGAACCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: TFTIGTLERTSCYNRKILRSWLW*CRTIFK
Trigger: CTTGAAGATGGTTCTGCAGCACCACAACCAACTCCT...CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGAGGGTTGGAGGTACAATaGATCCTAATGAATTCTCGG +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRGLEVQ*ILMNSR
Trigger: CCGAGAATTCATTAGGATGCATTGTACCTCCAACCC...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000611697.1
CDS-3UTR GCA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGAACACTTTGTTTATCTaGTCTTCCGAGGGCATCCAC +
Preference number: 4 (lower is better)
Translates to: VARIHLATCTGPIIPRIKNTLFI*SSEGIH
Trigger: GTGGATGCCCTCGGAAGAGCAGATAAACAAAGTGTT...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCTTGAGAGGACCAGCTaGTACAACAGGAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: HSQLELLRGPAATTGRFCLERTS*YNRKIL
Trigger: CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAG...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACATTGTTTGGTCTTCAGTaGACCAAACAACTAATTGCT +
Preference number: 4 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTLFGLQ*TKQLIA
Trigger: AGCAATTAGTTGTTTGGTGCACTGAAGACCAAACAA...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTGACTGGTCTCATGGCTaGCGTAAGAACATGGCATTT +
Preference number: 4 (lower is better)
Translates to: RTFTIGTLERTSCYNRKIDWSHG*RKNMAF
Trigger: AAATGCCATGTTCTTACGGCAGCCATGAGACCAGTC...AATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp ACTTTTATTGAAGACTTCATCCTGAGAAGCCTGGTGATCGATCCCTTCATAAAACAGGGGTGCAGAAAGTaGTCTCATCAGCCTCAGCGA +
Preference number: 4 (lower is better)
Translates to: TFIEDFILRSLVIDPFIKQGCRK*SHQPQR
Trigger: TCGCTGAGGCTGATGAGAGCACTTTCTGCACCCCTG...TTTTATGAAGGGATCGATCACCAGGCTTCTCAGGATGAAGTCTTCAATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR GCA 90 bp ACTTTTATTGAAGACTTCATCCTGAGAAGCCTGGTGATCGATCCCTTCATAAAAGCCATGGAGCAGGGGTaGAGAAAGTGCTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: TFIEDFILRSLVIDPFIKAMEQG*RKCSHQ
Trigger: CTGATGAGAGCACTTTCTGCACCCCTGCTCCATGGC...TTTTATGAAGGGATCGATCACCAGGCTTCTCAGGATGAAGTCTTCAATAAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR GCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACACTTTAGTAACTGCTTaGAAAATACTGGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNTLVTA*KILVPS
Trigger: GGAGGGGACCAGTATTTTGCAAGCAGTTACTAAAGT...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTTCATTCTGCTTCCTATaGCCAAAGCAATCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPASFCFL*PKQSSS
Trigger: AGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGA...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGACTGAACTCGTCATTCTaGTTCCTATGCCCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: ALDSQVTGTGHSQLELLRLNSSF*FLCPKQ
Trigger: TTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAG...TCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTTTACGCAAGAAATCATaGACTGAGAATGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: QVTGTGHSQLELLRGPAALRKKS*TENGWS
Trigger: ACTCCAACCATTCTCAGTCCATGATTTCTTGCGTAA...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCCGAGGGGTTTGGAGTTaGAAAGCTTCCCGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCRGVWS*KASREQ
Trigger: CTGCTCTCGGGAAGCTTTCCAACTCCAAACCCCTCG...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCGCATGTTACTTTAACTaGATCCAGAGGGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FTIGTLERTSCYNRKILSACYFN*IQRASF
Trigger: GAAAGACGCCCTCTGGATCCAGTTAAAGTAACATGC...GGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000611697.1
CDS-3UTR CCA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACATCCCCAGATCCATCCTaGGAACTTTTATTGAAGACT +
Preference number: 4 (lower is better)
Translates to: VTGTGHSQLELLRGPAATSPDPS*ELLLKT
Trigger: AGTCTTCAATAAAAGTTCCCAGGATGGATCTGGGGA...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CCA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGGTCACACCACTTGTTTaGTCTTCAGTGCACCAAACA +
Preference number: 4 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRVTPLV*SSVHQT
Trigger: TGTTTGGTGCACTGAAGACCAAACAAGTGGTGTGAC...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCAGTCACACCACTTGTTTaGTCTTCAGTGCACCAAACA +
Preference number: 4 (lower is better)
Translates to: SQLELLRGPAATTGRFCPVTPLV*SSVHQT
Trigger: TGTTTGGTGCACTGAAGACCAAACAAGTGGTGTGAC...TGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTATGATTAACCTGGAATaGGTGCGAGGGAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KTELVILLPMPKAILFLAMINLE*VRGRKR
Trigger: TCTCTTCCTCCCTCGCACCCATTCCAGGTTAATCAT...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACATACACAGAGGCCCAATaGGCCTTGCCAAAATACAAA +
Preference number: 4 (lower is better)
Translates to: TGTGHSQLELLRGPAATTYTEAQ*ALPKYK
Trigger: TTTGTATTTTGGCAAGGCCCATTGGGCCTCTGTGTA...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGTACACAGAGGCCCAATaGGCCTTGCCAAAATACAAA +
Preference number: 4 (lower is better)
Translates to: VARIHLATCTGPIIPRIKYTEAQ*ALPKYK
Trigger: TTTGTATTTTGGCAAGGCCCATTGGGCCTCTGTGTA...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTCAACTGAACATATTGTaGCGTGTGAAAGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPAQLNIL*RVKVVS
Trigger: AGAGACCACTTTCACACGCCACAATATGTTCAGTTG...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAATATGTCTACATTGTCTaGGGTCTGACTGTGGACCCC +
Preference number: 4 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQYVYIV*GLTVDP
Trigger: GGGGTCCACAGTCAGACCTCAGACAATGTAGACATA...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGTTTGTAGAGAGTCAGTaGAAACCCTCAAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VARIHLATCTGPIIPRIKFVESQ*KPSKRQ
Trigger: CTGCCTTTTTGAGGGTTTTCACTGACTCTCTACAAA...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATGACCGACAGCGTCGCTaGACACTTTGTTTATCTGCT +
Preference number: 4 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNDRQRR*TLCLSA
Trigger: AGCAGATAAACAAAGTGTTCAGCGACGCTGTCGGTC...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTTGTAGGTGCCACAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTGGGTGATCCCTTCATAAAATaGGCCACCGTTGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VVGATDFPNNPKMDFYLGDPFIK*ATVVQE
Trigger: TTCCTGCACAACGGTGGCTCATTTTATGAAGGGATC...ACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTGTGGCACCTACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCCCTGGGAACTTTTATTaGAGACTTCATCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GHSQLELLRGPAATTGRFPGNFY*RLHPEK
Trigger: CTTCTCAGGATGAAGTCTTCAATAAAAGTTCCCAGG...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR TCA 90 bp TCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCATTGTCAGAATCGCCTTaGAGCTGTGTGTATACAATG +
Preference number: 4 (lower is better)
Translates to: SQLELLRGPAATTGRFCPLSESP*SCVYTM
Trigger: CATTGTATACACACAGCTTCAAGGCGATTCTGACAA...TGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCCAGCTGATAGAGAAATaGTTAACCTGGAATGGGTGC +
Preference number: 4 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIQLIEK*LTWNGC
Trigger: GCACCCATTCCAGGTTAATCATTTCTCTATCAGCTG...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTTGCCAAAATACAAATaGACATCCTTTGTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SGDRNRTFTIGTLERTSCLPKYK*TSFVGP
Trigger: AGGACCAACAAAGGATGTTCATTTGTATTTTGGCAA...GCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGACTAAGGTTAAGCCATaGGATTTTGAACAATGCACC +
Preference number: 4 (lower is better)
Translates to: RNRTFTIGTLERTSCYNRTKVKP*DFEQCT
Trigger: GGTGCATTGTTCAAAATCTCATGGCTTAACCTTAGT...CCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCCAATGTGTCTGTCACTaGCAAAGGGATAAGGAACAA +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFQCVCH*QRDKEQ
Trigger: TTGTTCCTTATCCCTTTGTCAGTGACAGACACATTG...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GTTGTAGGTGCCACAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTGGGTAGTGAAATAACCTCCTaGTCCAGCTCTTGGCATCGA +
Preference number: 4 (lower is better)
Translates to: VVGATDFPNNPKMDFYLGSEITS*SSSWHR
Trigger: TCGATGCCAAGAGCTGGAGCAGGAGGTTATTTCACT...ACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTGTGGCACCTACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTTGTGACTTTAGTAACTaGTTGCAAAATACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPACDFSN*LQNTGP
Trigger: GGGACCAGTATTTTGCAAGCAGTTACTAAAGTCACA...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTAGGGATAAGGAACAATaGAGAATACCCGATCACCCA +
Preference number: 4 (lower is better)
Translates to: KTELVILLPMPKAILFLARDKEQ*RIPDHP
Trigger: TGGGTGATCGGGTATTCTGCATTGTTCCTTATCCCT...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACCTTACTAGCAAGACATaGTTTCACTGTAATTTGAGG +
Preference number: 4 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYLTSKT*FHCNLR
Trigger: CCTCAAATTACAGTGAAAGCATGTCTTGCTAGTAAG...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGCCTGTTCCCAAGAAGTaGAAGCCAGGACCCTCATGG +
Preference number: 4 (lower is better)
Translates to: FNLENTGQLSLFVGMALLPVPKK*KPGPSW
Trigger: CCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGG...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GTTGTAGGTGCCACAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTGGGTATCAGGAGTTGGTTGTaGTGCTGCAGAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: VVGATDFPNNPKMDFYLGIRSWL*CCRTIF
Trigger: GAAGATGGTTCTGCAGCACCACAACCAACTCCTGAT...ACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTGTGGCACCTACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAAATGGATTTCTATTTaGGTACTGTGGCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNKWISI*VLWQLR
Trigger: TCTCAGCTGCCACAGTACCCAAATAGAAATCCATTT...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGGCTGCCGTAAGAACATaGCATTTGCCCATATCATTT +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKAAVRT*HLPISF
Trigger: AAATGATATGGGCAAATGCCATGTTCTTACGGCAGC...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCGCTGCCGTAAGAACATaGCATTTGCCCATATCATTT +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFAAVRT*HLPISF
Trigger: AAATGATATGGGCAAATGCCATGTTCTTACGGCAGC...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGCAGATGAGGCTATGGTaGTGTTTTTCTTCTAGCGAA +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKQMRLW*CFSSSE
Trigger: TTCGCTAGAAGAAAAACACCACCATAGCCTCATCTG...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGGCTCAAGGGGCAGTGTaGATATGTCCCAAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FNLENTGQLSLFVGMALLAQGAV*ICPKER
Trigger: CCTCTCCTTGGGACATATCCACACTGCCCCTTGAGC...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTGGACTACCCATCTGCTaGGTGACGTTTTCCTACATT +
Preference number: 4 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCGLPIC*VTFSYI
Trigger: AATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCATCTGGCCACTTGTACTaGCCCAATTATTCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: SQLELLRGPAATTGRFCPSGHLY*PNYSKN
Trigger: ATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGA...TGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATCTGGCCACTTGTACTaGCCCAATTATTCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRSGHLY*PNYSKN
Trigger: ATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGA...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGAATAGTTTTCCAATGTaGCCAGGATACATCTGGCCA +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKNSFPM*PGYIWP
Trigger: TGGCCAGATGTATCCTGGCCACATTGGAAAACTATT...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCCCTTATACAGAAACCTaGGCAGATCCCAGAGGATAT +
Preference number: 4 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIPYTET*ADPRGY
Trigger: ATATCCTCTGGGATCTGCCCAGGTTTCTGTATAAGG...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACAAAATATCAGGATCAATaGATTTGTCACAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTKYQDQ*ICHSFS
Trigger: GGAGAAACTGTGACAAATCCATTGATCCTGATATTT...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp GACCCTCAAATTTCAGAGCAATTACTGACAAGCCCATaGCATAGTTGTCAGAATCGCCTTGAAGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: DPQISEQLLTSP*HSCQNRLEAVC
Trigger: ACACACAGCTTCAAGGCGATTCTGACAACTATGCAATGGGCTTGTCAGTAATTGCTCTGAAATTTGAGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGATGTGTCAACAAAGCCTaGTTTAAGGCTATGGAAACT +
Preference number: 4 (lower is better)
Translates to: ALDSQVTGTGHSQLELLRCVNKA*FKAMET
Trigger: AGTTTCCATAGCCTTAAATCAGGCTTTGTTGACACA...TCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGTGTGTCAACAAAGCCTaGTTTAAGGCTATGGAAACT +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKCVNKA*FKAMET
Trigger: AGTTTCCATAGCCTTAAATCAGGCTTTGTTGACACA...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTTTCTCAAAACAGGATTaGAATATTAGTGCCCACTAC +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPAFSKQD*NISAHY
Trigger: GTAGTGGGCACTAATATTTCAATCCTGTTTTGAGAA...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGCTAACTCTACAGCCGTaGAGTAGCTACAAATATGTC +
Preference number: 4 (lower is better)
Translates to: TFTIGTLERTSCYNRKILLTLQP*SSYKYV
Trigger: GACATATTTGTAGCTACTTCACGGCTGTAGAGTTAG...CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCGGATGTTTGCTTTTCTaGACATATAGTGCACGTTTC +
Preference number: 4 (lower is better)
Translates to: GHSQLELLRGPAATTGRFGCLLF*TYSARF
Trigger: GAAACGTGCACTATATGTTCAGAAAAGCAAACATCC...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp GGCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGTCTTCATTTTCTTGTTaGAGTGAAATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GFGLSGDRNRTFTIGTLESSFSC*SEITSC
Trigger: GCAGGAGGTTATTTCACTGCAACAAGAAAATGAAGA...CTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTTCTTCATTTTCTTGTTaGAGTGAAATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPASSFSC*SEITSC
Trigger: GCAGGAGGTTATTTCACTGCAACAAGAAAATGAAGA...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACACACCTCTATAGCATTTaGCAATATGGAAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VTGTGHSQLELLRGPAATHLYSI*QYGKFP
Trigger: TGGAAACTTTCCATATTGGCAAATGCTATAGAGGTG...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCCTTGTGCAAAAGAGATaGCCAACAATTAGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: FTIGTLERTSCYNRKILSLVQKR*PTISLN
Trigger: GTTGAGACTAATTGTTGGGCATCTCTTTTGCACAAG...GGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCAGAGGACTACCCATCTaGTGGGTGACGTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCRGLPI*WVTFSY
Trigger: GTAGGAAAACGTCACCCAGCAGATGGGTAGTCCTCT...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGGCCCCGGTGTTAGGCTaGTACATGAAGTTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: FNLENTGQLSLFVGMALLAPVLG*YMKFQR
Trigger: TCTCTGGAACTTCATGTAGCAGCCTAACACCGGGGC...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCTTACGCAAGAAATCATaGACTGAGAATGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFLRKKS*TENGWS
Trigger: ACTCCAACCATTCTCAGTCCATGATTTCTTGCGTAA...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGTTACGCAAGAAATCATaGACTGAGAATGGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: VARIHLATCTGPIIPRIKLRKKS*TENGWS
Trigger: ACTCCAACCATTCTCAGTCCATGATTTCTTGCGTAA...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTGTGGTATCAGGAGTTaGTTGTGGTGCTGCAGAACC +
Preference number: 4 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCCGIRS*LWCCRT
Trigger: GGTTCTGCAGCACCACAACCAACTCCTGATACCACA...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTTCCCCAGATCCATCCTaGGAACTTTTATTGAAGACT +
Preference number: 4 (lower is better)
Translates to: KTELVILLPMPKAILFLASPDPS*ELLLKT
Trigger: AGTCTTCAATAAAAGTTCCCAGGATGGATCTGGGGA...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCTCCCCAGATCCATCCTaGGAACTTTTATTGAAGACT +
Preference number: 4 (lower is better)
Translates to: LHHRILRRSSLIQKPGQISPDPS*ELLLKT
Trigger: AGTCTTCAATAAAAGTTCCCAGGATGGATCTGGGGA...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGAAATGGATTTCTATTTaGGTACTGTGGCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKKWISI*VLWQLR
Trigger: TCTCAGCTGCCACAGTACCCAAATAGAAATCCATTT...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGGAGAGCCAAAGAGACTaGTCTCATGGCTGCCGTAAG +
Preference number: 4 (lower is better)
Translates to: FNLENTGQLSLFVGMALLESQRD*SHGCRK
Trigger: CTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTC...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGAACAGTAGAAGTACAATaGAATATCTCACTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRTVEVQ*NISLRS
Trigger: GCTCCTGAGTGAGATATTCCATTGTACTTCTACTGT...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGCTCTCACCAATTAAGTaGGGGCACAGCTGCATCCTG +
Preference number: 4 (lower is better)
Translates to: FNLENTGQLSLFVGMALLLSPIK*GHSCIL
Trigger: CAGGATGCAGCTGTGCCCCCACTTAATTGGTGAGAG...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp TCTCAACCTCTCAGTGTTAACCTGCAACTGAACATATaGTGGCGTGTGAAAGTGGTCTCTAATGTGTACACA +
Preference number: 4 (lower is better)
Translates to: SQPLSVNLQLNI*WRVKVVSNVYT
Trigger: TGTGTACACATTAGAGACCACTTTCACACGCCACAATATGTTCAGTTGCAGGTTAACACTGAGAGGTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATATCATTGAGCAGATCTaGCAGATGACCACCTCCATA +
Preference number: 4 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNIIEQI*QMTTSI
Trigger: TATGGAGGTGGTCATCTGTCAGATCTGCTCAATGAT...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGTTCTCAAAACAGGATTaGAATATTAGTGCCCACTAC +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKFSKQD*NISAHY
Trigger: GTAGTGGGCACTAATATTTCAATCCTGTTTTGAGAA...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTATGGTGGTGTTTTTCTTCTAGCGAAGATGTCATGTTGTCAAAGAATCTTATATGCAGACGACCACCGTaGACTTACGTACATACCAGC +
Preference number: 4 (lower is better)
Translates to: LWWCFSSSEDVMLSKNLICRRPP*TYVHTS
Trigger: GCTGGTATGTACGTAAGTTCACGGTGGTCGTCTGCA...TATAAGATTCTTTGACAACATGACATCTTCGCTAGAAGAAAAACACCACCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTACTAAGGTTAAGCCATaGGATTTTGAACAATGCACC +
Preference number: 4 (lower is better)
Translates to: HSQLELLRGPAATTGRFCTKVKP*DFEQCT
Trigger: GGTGCATTGTTCAAAATCTCATGGCTTAACCTTAGT...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCATTTGGGGTAAACATCTaGTACTGCAAGAATAGTTAC +
Preference number: 4 (lower is better)
Translates to: SQLELLRGPAATTGRFCPFGVNI*YCKNSY
Trigger: GTAACTATTCTTGCAGTATCAGATGTTTACCCCAAA...TGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGAGACTCTCACTTCACTaGGTTCAAATGTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKRLSLH*VQMFAF
Trigger: AAAAGCAAACATTTGAACTCAGTGAAGTGAGAGTCT...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGAGACTCTCACTTCACTaGGTTCAAATGTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRRLSLH*VQMFAF
Trigger: AAAAGCAAACATTTGAACTCAGTGAAGTGAGAGTCT...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTTGTAGGTGCCACAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTGGGTCACAAACGTGAAAAGTaGATTGAACGTTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: VVGATDFPNNPKMDFYLGHKREK*IERWLP
Trigger: AGGTAGCCAACGTTCAATTCACTTTTCACGTTTGTG...ACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTGTGGCACCTACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGTCTTCATTTTCTTGTTaGAGTGAAATAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKSSFSC*SEITSC
Trigger: GCAGGAGGTTATTTCACTGCAACAAGAAAATGAAGA...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR GCA 90 bp GTTGTAGGTGCCACAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTGGGTAAAGTCTGTTGTAGGTaGCACAGACTTCCCAAACAA +
Preference number: 4 (lower is better)
Translates to: VVGATDFPNNPKMDFYLGKVCCR*HRLPKQ
Trigger: TTGTTTGGGAAGTCTGTGGCACCTACAACAGACTTT...ACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTGTGGCACCTACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGACACCTCTATAGCATTTaGCAATATGGAAAGTTTCCA +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRHLYSI*QYGKFP
Trigger: TGGAAACTTTCCATATTGGCAAATGCTATAGAGGTG...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCGTCCATTTAGCCCTTTaGTCTACAAAGAATGTAGTA +
Preference number: 4 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFVHLAL*STKNVV
Trigger: TACTACATTCTTTGTAGAGCAAAGGGCTAAATGGAC...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTCTGAGTTCAAATGTTTaGTTTTATCTCCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: SQVTGTGHSQLELLRGPALSSNV*FYLPAF
Trigger: AAATGCAGGGAGATAAAAGCAAACATTTGAACTCAG...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTATGGTGGTGTTTTTCTTCTAGCGAAGATGTCATGTTGTCAAAGAATCTTATAACTCGACTGCACTGCTaGGCAAAGGCATCCAAGATC +
Preference number: 4 (lower is better)
Translates to: LWWCFSSSEDVMLSKNLITRLHC*AKASKI
Trigger: GATCTTGGATGCCTTTGCCCAGCAGTGCAGTCGAGT...TATAAGATTCTTTGACAACATGACATCTTCGCTAGAAGAAAAACACCACCATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGGTAGATGAAGATGGGTaGCCATGGGATTCGGACGTT +
Preference number: 4 (lower is better)
Translates to: FNLENTGQLSLFVGMALLVDEDG*PWDSDV
Trigger: AACGTCCGAATCCCATGGCCACCCATCTTCATCTAC...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACTTTTATTGAAGACTTCATCCTGAGAAGCCTGGTGATCGATCCCTTCATAAAAATCAGGAGTTGGTTGTaGTGCTGCAGAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: TFIEDFILRSLVIDPFIKIRSWL*CCRTIF
Trigger: GAAGATGGTTCTGCAGCACCACAACCAACTCCTGAT...TTTTATGAAGGGATCGATCACCAGGCTTCTCAGGATGAAGTCTTCAATAAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR CCA 90 bp GTTGTAGGTGCCACAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTGGGTTCTATTTGGGTACTGTaGCAGCTGAGAATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: VVGATDFPNNPKMDFYLGSIWVL*QLRMCR
Trigger: TCTACACATTCTCAGCTGCCACAGTACCCAAATAGA...ACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTGTGGCACCTACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTTCTATTTGGGTACTGTaGCAGCTGAGAATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCSIWVL*QLRMCR
Trigger: TCTACACATTCTCAGCTGCCACAGTACCCAAATAGA...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CACATTAAACATACACCAGCAAGACTTGCACCATATGTGCAAAATCATTTTCTATGTCATGTACGGCCATaGAGCAGGGGTGCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: HIKHTPARLAPYVQNHFLCHVRP*SRGAES
Trigger: ACTTTCTGCACCCCTGCTCCATGGCCGTACATGACA...TAGAAAATGATTTTGCACATATGGTGCAAGTCTTGCTGGTGTATGTTTAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCACAGTAGAAGTACAATaGAATATCTCACTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LHHRILRRSSLIQKPGQITVEVQ*NISLRS
Trigger: GCTCCTGAGTGAGATATTCCATTGTACTTCTACTGT...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGTTATTGCCTAATTTaGGGTAAACATCTGATACTG +
Preference number: 4 (lower is better)
Translates to: TGTGHSQLELLRGPAATTGYCLI*GKHLIL
Trigger: CAGTATCAGATGTTTACCCCAAATTAGGCAATAACC...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCTCAGGAGGTAGTCAATaGGTATTAGGTTTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LHHRILRRSSLIQKPGQISGGSQ*VLGLGS
Trigger: AGAACCTAAACCTAATACCCATTGACTACCTCCTGA...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTCAACTGAACATATTGTaGCGTGTGAAAGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCQLNIL*RVKVVS
Trigger: AGAGACCACTTTCACACGCCACAATATGTTCAGTTG...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGAATCCCAGAGGATATATaGTTTGTATGTTCCTACCTA +
Preference number: 4 (lower is better)
Translates to: TGHSQLELLRGPAATTGRIPEDI*FVCSYL
Trigger: TAGGTAGGAACATACAAACCATATATCCTCTGGGAT...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATCCTTATACAGAAACCTaGGCAGATCCCAGAGGATAT +
Preference number: 4 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNPYTET*ADPRGY
Trigger: ATATCCTCTGGGATCTGCCCAGGTTTCTGTATAAGG...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTAAATATCAGGATCAATaGATTTGTCACAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLPICWVTFSYITPTEVVKYQDQ*ICHSFS
Trigger: GGAGAAACTGTGACAAATCCATTGATCCTGATATTT...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp TCTAGTCAATTCAGCGAATACCATCAGTCACACCACTaGTTTGGTCTTCAGTGCACCAAACAACTAATTGCT +
Preference number: 4 (lower is better)
Translates to: SSQFSEYHQSHH*FGLQCTKQLIA
Trigger: AGCAATTAGTTGTTTGGTGCACTGAAGACCAAACAAGTGGTGTGACTGATGGTATTCGCTGAATTGACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp GAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATTaGCCCATATCATTTCTTTTACTTCCAAATTTTAGC +
Preference number: 4 (lower is better)
Translates to: ETGLMAAVRTWH*PISFLLLPNFS
Trigger: GCTAAAATTTGGAAGTAAAAGAAATGATATGGGCAAATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp ATAGTTTTCCAATGTGGCCAGGATACATCTGGCCACTaGTACTGGCCCAATTATTCCAAGAATAAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: IVFQCGQDTSGH*YWPNYSKNKEV
Trigger: AACCTCTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCACATTGGAAAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp GTTCCCAAAGACTCTCACTTCACTGAGTTCAAATGTTaGCTTTTATCTCCCTGCATTTTTGCACTAGGAACC +
Preference number: 4 (lower is better)
Translates to: VPKDSHFTEFKC*LLSPCIFALGT
Trigger: GGTTCCTAGTGCAAAAATGCAGGGAGATAAAAGCAAACATTTGAACTCAGTGAAGTGAGAGTCTTTGGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATTTTGTAGAGAGTCAGTaGAAACCCTCAAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNFVESQ*KPSKRQ
Trigger: CTGCCTTTTTGAGGGTTTTCACTGACTCTCTACAAA...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTAGATGGAAAAACAGATaGGGCTATGGTGGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCRWKNR*GYGGVF
Trigger: AAAAACACCACCATAGCCTCATCTGTTTTTCCATCT...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCTTGTTTGGTCTTCAGTaGACCAAACAACTAATTGCT +
Preference number: 4 (lower is better)
Translates to: LHHRILRRSSLIQKPGQILFGLQ*TKQLIA
Trigger: AGCAATTAGTTGTTTGGTGCACTGAAGACCAAACAA...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGGACTGGTCTCATGGCTaGCGTAAGAACATGGCATTT +
Preference number: 4 (lower is better)
Translates to: FNLENTGQLSLFVGMALLDWSHG*RKNMAF
Trigger: AAATGCCATGTTCTTACGGCAGCCATGAGACCAGTC...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATAGTTCTGGCACGTGTTaGCACATTAAACATACACCA +
Preference number: 4 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNSSGTC*HIKHTP
Trigger: TGGTGTATGTTTAATGTGGCAACACGTGCCAGAACT...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp ACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGCTTACTAGCAAGACATaGTTTCACTGTAATTTGAGG +
Preference number: 4 (lower is better)
Translates to: TFTIGTLERTSCYNRKILLTSKT*FHCNLR
Trigger: CCTCAAATTACAGTGAAAGCATGTCTTGCTAGTAAG...CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTTTGCTTTTATCTCCCTaGATTTTTGCACTAGGAACC +
Preference number: 4 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCLLLSP*IFALGT
Trigger: GGTTCCTAGTGCAAAAATGCAGGGAGATAAAAGCAA...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGGGTTATTGCCTAATTTaGGGTAAACATCTGATACTG +
Preference number: 4 (lower is better)
Translates to: TFTIGTLERTSCYNRKILGYCLI*GKHLIL
Trigger: CAGTATCAGATGTTTACCCCAAATTAGGCAATAACC...CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp TCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCATTACTCCAACTGAAGTaGTTATTTTTATCCAGCACT +
Preference number: 4 (lower is better)
Translates to: SQLELLRGPAATTGRFCPLLQLK*LFLSST
Trigger: AGTGCTGGATAAAAATAACCACTTCAGTTGGAGTAA...TGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCATCCCAGAGGATATATaGTTTGTATGTTCCTACCTA +
Preference number: 4 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIIPEDI*FVCSYL
Trigger: TAGGTAGGAACATACAAACCATATATCCTCTGGGAT...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTATGGTGGTGTTTTTCTTCTAGCGAAGATGTCATGTTGTCAAAGAATCTTATACAAGAAATCATGGACTaGGAATGGTTGGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LWWCFSSSEDVMLSKNLIQEIMD*EWLESR
Trigger: CCTGGACTCCAACCATTCTCAGTCCATGATTTCTTG...TATAAGATTCTTTGACAACATGACATCTTCGCTAGAAGAAAAACACCACCATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CACATTAAACATACACCAGCAAGACTTGCACCATATGTGCAAAATCATTTTCTAGATCCCTTCATAAAATaGGCCACCGTTGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: HIKHTPARLAPYVQNHFLDPFIK*ATVVQE
Trigger: TTCCTGCACAACGGTGGCTCATTTTATGAAGGGATC...TAGAAAATGATTTTGCACATATGGTGCAAGTCTTGCTGGTGTATGTTTAATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTATGGTGGTGTTTTTCTTCTAGCGAAGATGTCATGTTGTCAAAGAATCTTATACACAATTGGAACTCTTaGGAGGACCAGCTGCTACAA +
Preference number: 4 (lower is better)
Translates to: LWWCFSSSEDVMLSKNLIHNWNS*EDQLLQ
Trigger: TTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTG...TATAAGATTCTTTGACAACATGACATCTTCGCTAGAAGAAAAACACCACCATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCATCCTTTGTTGGTCCTaGTTTAAACAAGAGGAGACC +
Preference number: 4 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCILCWS*FKQEET
Trigger: GGTCTCCTCTTGTTTAAATCAGGACCAACAAAGGAT...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp GTTGTAGGTGCCACAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTGGGTTTGCCAAAATACAAATaGACATCCTTTGTTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VVGATDFPNNPKMDFYLGLPKYK*TSFVGP
Trigger: AGGACCAACAAAGGATGTTCATTTGTATTTTGGCAA...ACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTGTGGCACCTACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCCACAAACGTGAAAAGTaGATTGAACGTTGGCTACCT +
Preference number: 4 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCHKREK*IERWLP
Trigger: AGGTAGCCAACGTTCAATTCACTTTTCACGTTTGTG...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACTTTTATTGAAGACTTCATCCTGAGAAGCCTGGTGATCGATCCCTTCATAAAAAGAATGTGTAGACTATaGCAGAATGACAGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: TFIEDFILRSLVIDPFIKRMCRL*QNDRLW
Trigger: CCAAAGCCTGTCATTCTGCCATAGTCTACACATTCT...TTTTATGAAGGGATCGATCACCAGGCTTCTCAGGATGAAGTCTTCAATAAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR CCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGACTTTGGAACAAAAGTaGTGTGCAAACCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: FNLENTGQLSLFVGMALLTLEQK*CANLGQ
Trigger: CTGTCCCAGGTTTGCACACCACTTTTGTTCCAAAGT...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp CTTTGCTCTACAAAGAATGTAGTAATCTGGACTAGTTaGGTAAAGAAAGCCTCTCCTGAGTCCAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: LCSTKNVVIWTS*VKKASPESKQE
Trigger: TTCCTGTTTGGACTCAGGAGAGGCTTTCTTTACCAAACTAGTCCAGATTACTACATTCTTTGTAGAGCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCCTTGTGCAAAAGAGATaGCCAACAATTAGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCLVQKR*PTISLN
Trigger: GTTGAGACTAATTGTTGGGCATCTCTTTTGCACAAG...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp CTATGGTGGTGTTTTTCTTCTAGCGAAGATGTCATGTTGTCAAAGAATCTTATAAGTCTGTCAGCCTTGTaGAAAAGAGATGCCCAACAA +
Preference number: 4 (lower is better)
Translates to: LWWCFSSSEDVMLSKNLISLSAL*KRDAQQ
Trigger: TTGTTGGGCATCTCTTTTGCACAAGGCTGACAGACT...TATAAGATTCTTTGACAACATGACATCTTCGCTAGAAGAAAAACACCACCATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCTTTTATCTCCCTaGATTTTTGCACTAGGAACC +
Preference number: 4 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCLLLSP*IFALGT
Trigger: GGTTCCTAGTGCAAAAATGCAGGGAGATAAAAGCAA...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp ACTTTTATTGAAGACTTCATCCTGAGAAGCCTGGTGATCGATCCCTTCATAAAATCAGGAGGTAGTCAATaGGTATTAGGTTTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TFIEDFILRSLVIDPFIKSGGSQ*VLGLGS
Trigger: AGAACCTAAACCTAATACCCATTGACTACCTCCTGA...TTTTATGAAGGGATCGATCACCAGGCTTCTCAGGATGAAGTCTTCAATAAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR TCA 90 bp CACATTAAACATACACCAGCAAGACTTGCACCATATGTGCAAAATCATTTTCTACCTGGGAACTTTTATTaGAGACTTCATCCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: HIKHTPARLAPYVQNHFLPGNFY*RLHPEK
Trigger: CTTCTCAGGATGAAGTCTTCAATAAAAGTTCCCAGG...TAGAAAATGATTTTGCACATATGGTGCAAGTCTTGCTGGTGTATGTTTAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTATGGTGGTGTTTTTCTTCTAGCGAAGATGTCATGTTGTCAAAGAATCTTATACAATGTGTCTGTCACTaGCAAAGGGATAAGGAACAA +
Preference number: 4 (lower is better)
Translates to: LWWCFSSSEDVMLSKNLIQCVCH*QRDKEQ
Trigger: TTGTTCCTTATCCCTTTGTCAGTGACAGACACATTG...TATAAGATTCTTTGACAACATGACATCTTCGCTAGAAGAAAAACACCACCATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR GCA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATCTGAGTTCAAATGTTTaGTTTTATCTCCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNLSSNV*FYLPAF
Trigger: AAATGCAGGGAGATAAAAGCAAACATTTGAACTCAG...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp CTATGGTGGTGTTTTTCTTCTAGCGAAGATGTCATGTTGTCAAAGAATCTTATAGGATGCTCATTAACCTaGATCTCCAACCAATTTTCA +
Preference number: 4 (lower is better)
Translates to: LWWCFSSSEDVMLSKNLIGCSLT*ISNQFS
Trigger: TGAAAATTGGTTGGAGATTCAGGTTAATGAGCATCC...TATAAGATTCTTTGACAACATGACATCTTCGCTAGAAGAAAAACACCACCATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR TCA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGTTTGGGGTAAACATCTaGTACTGCAAGAATAGTTAC +
Preference number: 4 (lower is better)
Translates to: FNLENTGQLSLFVGMALLFGVNI*YCKNSY
Trigger: GTAACTATTCTTGCAGTATCAGATGTTTACCCCAAA...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CCA 90 bp CTATGGTGGTGTTTTTCTTCTAGCGAAGATGTCATGTTGTCAAAGAATCTTATAAAACAGATGAGGCTATaGTGGTGTTTTTCTTCTAGC +
Preference number: 4 (lower is better)
Translates to: LWWCFSSSEDVMLSKNLIKQMRL*WCFSSS
Trigger: GCTAGAAGAAAAACACCACCATAGCCTCATCTGTTT...TATAAGATTCTTTGACAACATGACATCTTCGCTAGAAGAAAAACACCACCATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp ATGAGTCTTACTAGCAAGACATGCTTTCACTGTAATTaGAGGATCTGTGATTCAATAAAAACACAGCCCTTA +
Preference number: 4 (lower is better)
Translates to: MSLTSKTCFHCN*RICDSIKTQPL
Trigger: TAAGGGCTGTGTTTTTATTGAATCACAGATCCTCAAATTACAGTGAAAGCATGTCTTGCTAGTAAGACTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
3UTR CAA 72 bp GTCAAAATGGTATATGATGTCATCTATCCTATGTCTTaGCCGAGAAATATGAAGTCAAGTCTTTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: VKMVYDVIYPMS*PRNMKSSLWKT
Trigger: TGTTTTCCAAAGACTTGACTTCATATTTCTCGGCAAAGACATAGGATAGATGACATCATATACCATTTTGAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS CCA 90 bp GTGCCTCCGCCGCCTGCCCGCCGGGTCTGCCCTGGTGCGCGCGTGTaGGAGGGTGTGTGTCTGTGCCGTGGCCGCCGCCGCCGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: VPPPPARRVCPGARV*EGVCLCRGRRRRRL
Trigger: CAGGCGGCGGCGGCGGCGGCCACGGCACAGACACACACCCTCCCACACGCGCGCACCAGGGCAGACCCGGCGGGCAGGCGGCGGAGGCAC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS TCA 90 bp AGGAGCTCTGCGCCTGGAACTGCTGCGGCGGCGGCTCGCTGCTGCTaGTGGAGACGGCGGCGTGCGGCGCGAAGGGCGGCGGGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: RSSAPGTAAAAARCC*WRRRRAARRAAGAA
Trigger: CGCCGCCCCCGCCGCCCTTCGCGCCGCACGCCGCCGTCTCCATCAGCAGCAGCGAGCCGCCGCCGCAGCAGTTCCAGGCGCAGAGCTCCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS CCA 90 bp ACGCGGGCGGCGGCTGCGCCGGAGTCCTCAAGTGGCCCTGGGATGTaGCGGGCGTGCAGGACGGCGACGACGACGAAGCGGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: TRAAAAPESSSGPGM*RACRTATTTKRRRR
Trigger: CCGCCGCCGCCGCTTCGTCGTCGTCGCCGTCCTGCACGCCCGCCACATCCCAGGGCCACTTGAGGACTCCGGCGCAGCCGCCGCCCGCGT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS GCA 90 bp GGCTACGGCGAGACTTTAGAGACCCAGATGTGGACTCGAGGCTTCTaGGGCTGCGGGCGGGGTCCGGCTTCCGAAACGAGCTCGTGGCGC +
Preference number: 5 (lower is better)
Translates to: GYGETLETQMWTRGF*GCGRGPASETSSWR
Trigger: GCGCCACGAGCTCGTTTCGGAAGCCGGACCCCGCCCGCAGCCGCAGAAGCCTCGAGTCCACATCTGGGTCTCTAAAGTCTCGCCGTAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS GCA 90 bp CCATGGGATTCGGACGTTGCTGGGGAAGTCCAGCCACCTAATGTATaGACAGGAGAGGTTGACAGAGGATCCACGTCGGCCAGATGGCCA +
Preference number: 5 (lower is better)
Translates to: PWDSDVAGEVQPPNV*TGEVDRGSTSARWP
Trigger: TGGCCATCTGGCCGACGTGGATCCTCTGTCAACCTCTCCTGTGCATACATTAGGTGGCTGGACTTCCCCAGCAACGTCCGAATCCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATGCCAGCGCCGGTCTCTaGCTGGGGAACGTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHASAGL*LGNVLR
Trigger: CCTCAAGACGTTCCCCAGCAAGAGACCGGCGCTGGC...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS TCA 90 bp ATAGCCTTCCTCGTCCTCCTCCTCCTCCTCTTCTGGCAGTGTAGATaGAGATGGGTGGCCATGGGATTCGGACGTTGCTGGGGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: IAFLVLLLLLFWQCR*RWVAMGFGRCWGSP
Trigger: TGGACTTCCCCAGCAACGTCCGAATCCCATGGCCACCCATCTTCATCTACACTGCCAGAAGAGGAGGAGGAGGAGGACGAGGAAGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CCA 90 bp GAGAGGTTGACAGAGGATCCACGTCGGCCAGATGGCCATATTCACTaGCTGACGAGGGGTTTGGAGTTGGAAAGCTTCCCGAGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: ERLTEDPRRPDGHIH*LTRGLELESFPRAG
Trigger: ACCTGCTCTCGGGAAGCTTTCCAACTCCAAACCCCTCGTCAGCCAGTGAATATGGCCATCTGGCCGACGTGGATCCTCTGTCAACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CCA 90 bp TCGTCCTCCTCCTCCTCCTCTTCTGGCAGTGTAGATGAAGATGGGTaGCCATGGGATTCGGACGTTGCTGGGGAAGTCCAGCCACCTAAT +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSGSVDEDG*PWDSDVAGEVQPPN
Trigger: ATTAGGTGGCTGGACTTCCCCAGCAACGTCCGAATCCCATGGCCACCCATCTTCATCTACACTGCCAGAAGAGGAGGAGGAGGAGGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp ACACAACTCCATGTCTCCACCTTCTCCCATGGGCAGAAACACTACCCCAGCCTATGGCTGACGAGGGGTTaGGAGTTGGAAAGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: TQLHVSTFSHGQKHYPSLWLTRG*ELESFP
Trigger: CGGGAAGCTTTCCAACTCCAAACCCCTCGTCAGCCA...TAGGCTGGGGTAGTGTTTCTGCCCATGGGAGAAGGTGGAGACATGGAGTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGCATGGGATTCGGACGTaGCTGGGGAAGTCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMHGIRT*LGKSSH
Trigger: GTGGCTGGACTTCCCCAGCAACGTCCGAATCCCATG...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTACGTCAGACGCTAGGCTaGGCTAAAGGAACCCAGCAG +
Preference number: 5 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVRQTLG*AKGTQQ
Trigger: CTGCTGGGTTCCTTTAGCCAAGCCTAGCGTCTGACG...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS TCA 90 bp CTACCAATCGGGAATTGCTCTCCGATCCTTCTGAAAAGAACCTCTTaGAGATCTTGGCCCGGGTGGTCGCGCGGTGTTTACGGGGCTTTG +
Preference number: 5 (lower is better)
Translates to: LPIGNCSPILLKRTS*RSWPGWSRGVYGAL
Trigger: CAAAGCCCCGTAAACACCGCGCGACCACCCGGGCCAAGATCTTCAAGAGGTTCTTTTCAGAAGGATCGGAGAGCAATTCCCGATTGGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR CAA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTCATGGGATTCGGACGTaGCTGGGGAAGTCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: QVTGTGHSQLELLRGPAAHGIRT*LGKSSH
Trigger: GTGGCTGGACTTCCCCAGCAACGTCCGAATCCCATG...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGAGTGGTGCAGGTGCGTaGTCATGTACGGCCATGGAG +
Preference number: 5 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMSGAGA*SCTAME
Trigger: CTCCATGGCCGTACATGACAACGCACCTGCACCACT...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATTATGCACAGGAGAGGTaGACAGAGGATCCACGTCGG +
Preference number: 5 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHYAQER*TEDPRR
Trigger: CCGACGTGGATCCTCTGTCAACCTCTCCTGTGCATA...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp AGCAGAGGAGTTAGAACTGGCTGTGCGATGCTGAGTATGGAGTCTGTCAGCCTTTATGCACAGGAGAGGTaGACAGAGGATCCACGTCGG +
Preference number: 5 (lower is better)
Translates to: SRGVRTGCAMLSMESVSLYAQER*TEDPRR
Trigger: CCGACGTGGATCCTCTGTCAACCTCTCCTGTGCATA...AAGGCTGACAGACTCCATACTCAGCATCGCACAGCCAGTTCTAACTCCTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTAGGTATCAGGAGTTGGTaGTGGTGCTGCAGAACCATC +
Preference number: 5 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVGIRSW*WCCRTI
Trigger: GATGGTTCTGCAGCACCACAACCAACTCCTGATACC...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTCTACCCCAGCCTACCTaGGGGACTATCTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SQVTGTGHSQLELLRGPALPQPT*GTISAQ
Trigger: CTGGGCAGAGATAGTCCCCAAGGTAGGCTGGGGTAG...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACCGTCAGACGCTAGGCTaGGCTAAAGGAACCCAGCAG +
Preference number: 5 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYRQTLG*AKGTQQ
Trigger: CTGCTGGGTTCCTTTAGCCAAGCCTAGCGTCTGACG...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GTGGCCAGGATACATCTGGCCACTTGTACTGGCCCAATTATTCCAAGAATAAAGAACCTCTTGAAGATCTaGGCCCGGGTGGTCGCGCGG +
Preference number: 5 (lower is better)
Translates to: VARIHLATCTGPIIPRIKNLLKI*ARVVAR
Trigger: CCGCGCGACCACCCGGGCCAAGATCTTCAAGAGGTT...CTTTATTCTTGGAATAATTGGGCCAGTACAAGTGGCCAGATGTATCCTGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR CAA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTCCCAAACTCTCGGGGTaGCACAGAGGAGGGGCTAGT +
Preference number: 5 (lower is better)
Translates to: GLPICWVTFSYITPTEVVPKLSG*HRGGAS
Trigger: ACTAGCCCCTCCTCTGTGCAACCCCGAGAGTTTGGG...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS GCA 90 bp TTAACTGGATCCAGAGGGCGTCTTTCGGGACCTGTCTCTCCTGACTaGACTGACCTTTTCCTTTTCCCAAGGCCGCATGAGTACTTAAGC +
Preference number: 5 (lower is better)
Translates to: LTGSRGRLSGPVSPD*TDLFLFPRPHEYLS
Trigger: GCTTAAGTACTCATGCGGCCTTGGGAAAAGGAAAAGGTCAGTGCAGTCAGGAGAGACAGGTCCCGAAAGACGCCCTCTGGATCCAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000611697.1
CDS CCA 90 bp AATGTATGCACAGGAGAGGTTGACAGAGGATCCACGTCGGCCAGATaGCCATATTCACTGGCTGACGAGGGGTTTGGAGTTGGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: NVCTGEVDRGSTSAR*PYSLADEGFGVGKL
Trigger: AAGCTTTCCAACTCCAAACCCCTCGTCAGCCAGTGAATATGGCCATCTGGCCGACGTGGATCCTCTGTCAACCTCTCCTGTGCATACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACTGGCTGACGAGGGGTTaGGAGTTGGAAAGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNWLTRG*ELESFP
Trigger: CGGGAAGCTTTCCAACTCCAAACCCCTCGTCAGCCA...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp GACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACCTCCTGCTCCAGCTCTaGGCATCGAGGACAATAGCC +
Preference number: 5 (lower is better)
Translates to: DRNRTFTIGTLERTSCYNLLLQL*ASRTIA
Trigger: GGCTATTGTCCTCGATGCCAAGAGCTGGAGCAGGAG...GTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGCTGTGGTATCAGGAGTaGGTTGTGGTGCTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMLWYQE*VVVLQN
Trigger: GTTCTGCAGCACCACAACCAACTCCTGATACCACAG...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACGCGTCGCTGAACACTTaGTTTATCTGCTCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHASLNT*FICSSE
Trigger: CTCGGAAGAGCAGATAAACAAAGTGTTCAGCGACGC...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TCGGGCGTGACCGACAGCGTCGCTGAACACTTTGTTTATCTGCTCTTCCGAGGGCCCATCACTTTGGCATaGTGTCAACAAAGCCTGATT +
Preference number: 5 (lower is better)
Translates to: SGVTDSVAEHFVYLLFRGPITLA*CQQSLI
Trigger: AATCAGGCTTTGTTGACACAATGCCAAAGTGATGGG...CCCTCGGAAGAGCAGATAAACAAAGTGTTCAGCGACGCTGTCGGTCACGCCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR CAA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTAGTCTTTCGTTGTAACTaGAGCCTTCCTGCTTTACGC +
Preference number: 5 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVVFRCN*SLPALR
Trigger: GCGTAAAGCAGGAAGGCTCAAGTTACAACGAAAGAC...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACGAGGGGTTTGGAGTaGGAAAGCTTCCCGAGAGCA +
Preference number: 5 (lower is better)
Translates to: VTGTGHSQLELLRGPAATTRGLE*ESFPRA
Trigger: TGCTCTCGGGAAGCTTTCCAACTCCAAACCCCTCGT...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp AGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGTATGCACAGGAGAGGTaGACAGAGGATCCACGTCGG +
Preference number: 5 (lower is better)
Translates to: RNRTFTIGTLERTSCYNRYAQER*TEDPRR
Trigger: CCGACGTGGATCCTCTGTCAACCTCTCCTGTGCATA...CCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTCATGGGATTCGGACGTaGCTGGGGAAGTCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: KTELVILLPMPKAILFLAHGIRT*LGKSSH
Trigger: GTGGCTGGACTTCCCCAGCAACGTCCGAATCCCATG...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCCTCCTGCTCCAGCTCTaGGCATCGAGGACAATAGCC +
Preference number: 5 (lower is better)
Translates to: FTIGTLERTSCYNRKILSLLLQL*ASRTIA
Trigger: GGCTATTGTCCTCGATGCCAAGAGCTGGAGCAGGAG...GGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTCTGTGGTATCAGGAGTaGGTTGTGGTGCTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: QVTGTGHSQLELLRGPAALWYQE*VVVLQN
Trigger: GTTCTGCAGCACCACAACCAACTCCTGATACCACAG...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp GTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACATTGTTCAACAGCTGCTaGCTTCCCTCTGTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: VTGTGHSQLELLRGPAATLFNSC*LPSVGW
Trigger: CCAGCCGACAGAGGGAAGCAAGCAGCTGTTGAACAA...TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTGTTGTCAGAATCGCCTaGAAGCTGTGTGTATACAAT +
Preference number: 5 (lower is better)
Translates to: MPCSQEVQARTLMALACSVVRIA*KLCVYN
Trigger: ATTGTATACACACAGCTTCAAGGCGATTCTGACAAC...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGAAGTGGTGCAGGTGCGTaGTCATGTACGGCCATGGAG +
Preference number: 5 (lower is better)
Translates to: TGHSQLELLRGPAATTGRSGAGA*SCTAME
Trigger: CTCCATGGCCGTACATGACAACGCACCTGCACCACT...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CTACATGAAGTTCCAGAGAGGAGAGACATAAAGGCAATGCCTAAATTGCGCAGGTGGCTGGAACTGAGCTaGGGGCTTCAACTCACTGCG +
Preference number: 5 (lower is better)
Translates to: LHEVPERRDIKAMPKLRRWLELS*GLQLTA
Trigger: CGCAGTGAGTTGAAGCCCCAAGCTCAGTTCCAGCCA...CCTGCGCAATTTAGGCATTGCCTTTATGTCTCTCCTCTCTGGAACTTCATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGTGGCTGGAACTGAGCTaGGGGCTTCAACTCACTGCG +
Preference number: 5 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKWLELS*GLQLTA
Trigger: CGCAGTGAGTTGAAGCCCCAAGCTCAGTTCCAGCCA...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS GCA 90 bp AGGAGTTTTCCTCCACAATTTAAGAGGCTAAGAACTCGACTGCACTaGTGGGCAAAGGCATCCAAGATCATTCGACTCTCTGCGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RSFPPQFKRLRTRLH*WAKASKIIRLSALS
Trigger: GCTCAGCGCAGAGAGTCGAATGATCTTGGATGCCTTTGCCCAGCAGTGCAGTCGAGTTCTTAGCCTCTTAAATTGTGGAGGAAAACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CCA 90 bp AGTTTTCCTCCACAATTTAAGAGGCTAAGAACTCGACTGCACTGCTaGGCAAAGGCATCCAAGATCATTCGACTCTCTGCGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SFPPQFKRLRTRLHC*AKASKIIRLSALSS
Trigger: GGAGCTCAGCGCAGAGAGTCGAATGATCTTGGATGCCTTTGCCCAGCAGTGCAGTCGAGTTCTTAGCCTCTTAAATTGTGGAGGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp GCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGATTGTTCAACAGCTGCTaGCTTCCCTCTGTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: ALDSQVTGTGHSQLELLRLFNSC*LPSVGW
Trigger: CCAGCCGACAGAGGGAAGCAAGCAGCTGTTGAACAA...TCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTTGTTCAACAGCTGCTaGCTTCCCTCTGTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: GHSQLELLRGPAATTGRFLFNSC*LPSVGW
Trigger: CCAGCCGACAGAGGGAAGCAAGCAGCTGTTGAACAA...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTATCCACCAATCGGGGTaGGAGGTACAATGCATCCTA +
Preference number: 5 (lower is better)
Translates to: QVTGTGHSQLELLRGPAAIHQSG*EVQCIL
Trigger: TAGGATGCATTGTACCTCCAACCCCGATTGGTGGAT...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACGCGTCGCTGAACACTTaGTTTATCTGCTCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYASLNT*FICSSE
Trigger: CTCGGAAGAGCAGATAAACAAAGTGTTCAGCGACGC...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTCTACCCCAGCCTACCTaGGGGACTATCTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCLPQPT*GTISAQ
Trigger: CTGGGCAGAGATAGTCCCCAAGGTAGGCTGGGGTAG...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACCACTGTCTGCAGATGTaGCCTCTGTTCTCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYHCLQM*PLFSGF
Trigger: GAAACCAGAGAACAGAGGCAACATCTGCAGACAGTG...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ATGCCCTGTTCCCAAGAAGTGCAAGCCAGGACCCTCATGGCCTTGGCATGCTCTGAAAACACAGGACAGTaGTCACTTTTTGTAGGTATG +
Preference number: 5 (lower is better)
Translates to: MPCSQEVQARTLMALACSENTGQ*SLFVGM
Trigger: CATACCTACAAAAAGTGACAACTGTCCTGTGTTTTC...AGAGCATGCCAAGGCCATGAGGGTCCTGGCTTGCACTTCTTGGGAACAGGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TCGGGCGTGACCGACAGCGTCGCTGAACACTTTGTTTATCTGCTCTTCCGAGGGTTAAGCCATGAGATTTaGAACAATGCACCGTCAAGA +
Preference number: 5 (lower is better)
Translates to: SGVTDSVAEHFVYLLFRGLSHEI*NNAPSR
Trigger: TCTTGACGGTGCATTGTTCAAAATCTCATGGCTTAA...CCCTCGGAAGAGCAGATAAACAAAGTGTTCAGCGACGCTGTCGGTCACGCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR CAA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATCTGCAACTGAACATATaGTGGCGTGTGAAAGTGGTC +
Preference number: 5 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHLQLNI*WRVKVV
Trigger: GACCACTTTCACACGCCACAATATGTTCAGTTGCAG...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CAAAAGTGGTGTGCAAACCTGGGACAGCAGCCTTCTCAGGAGGTAACAGTGACAGGCCTTGGCATGCTCTaGAACTTAAACACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: QKWCANLGQQPSQEVTVTGLGML*NLNTAK
Trigger: TTTGGCTGTGTTTAAGTTCAAGAGCATGCCAAGGCC...TGTCACTGTTACCTCCTGAGAAGGCTGCTGTCCCAGGTTTGCACACCACTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGTCTACCAATCGGGAATaGCTCTCCGATCCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMSTNRE*LSDPSE
Trigger: TTCAGAAGGATCGGAGAGCAATTCCCGATTGGTAGA...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR CAA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGGCCAGCGCCGGTCTCTaGCTGGGGAACGTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: FNLENTGQLSLFVGMALLASAGL*LGNVLR
Trigger: CCTCAAGACGTTCCCCAGCAAGAGACCGGCGCTGGC...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGACGAGGGGTTTGGAGTaGGAAAGCTTCCCGAGAGCA +
Preference number: 5 (lower is better)
Translates to: TFTIGTLERTSCYNRKILTRGLE*ESFPRA
Trigger: TGCTCTCGGGAAGCTTTCCAACTCCAAACCCCTCGT...CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTACGAGGGGTTTGGAGTaGGAAAGCTTCCCGAGAGCA +
Preference number: 5 (lower is better)
Translates to: HSQLELLRGPAATTGRFCTRGLE*ESFPRA
Trigger: TGCTCTCGGGAAGCTTTCCAACTCCAAACCCCTCGT...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp GTTGTAGGTGCCACAGACTTCCCAAACAACCCTAAAATGGATTTCTATTTGGGTCTCCTGCTCCAGCTCTaGGCATCGAGGACAATAGCC +
Preference number: 5 (lower is better)
Translates to: VVGATDFPNNPKMDFYLGLLLQL*ASRTIA
Trigger: GGCTATTGTCCTCGATGCCAAGAGCTGGAGCAGGAG...ACCCAAATAGAAATCCATTTTAGGGTTGTTTGGGAAGTCTGTGGCACCTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGAGGTATCAGGAGTTGGTaGTGGTGCTGCAGAACCATC +
Preference number: 5 (lower is better)
Translates to: TGHSQLELLRGPAATTGRGIRSW*WCCRTI
Trigger: GATGGTTCTGCAGCACCACAACCAACTCCTGATACC...TCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp TCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCAGGTATCAGGAGTTGGTaGTGGTGCTGCAGAACCATC +
Preference number: 5 (lower is better)
Translates to: SQLELLRGPAATTGRFCPGIRSW*WCCRTI
Trigger: GATGGTTCTGCAGCACCACAACCAACTCCTGATACC...TGGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp AGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGGCGTCGCTGAACACTTaGTTTATCTGCTCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: RNRTFTIGTLERTSCYNRASLNT*FICSSE
Trigger: CTCGGAAGAGCAGATAAACAAAGTGTTCAGCGACGC...CCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAGTTCTACCCATCACTTaGGCATTGTGTCAACAAAGC +
Preference number: 5 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSVLPIT*ALCQQS
Trigger: GCTTTGTTGACACAATGCCAAAGTGATGGGTAGAAC...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCATTACTGACAAGCCCATaGCATAGTTGTCAGAATCGC +
Preference number: 5 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSLLTSP*HSCQNR
Trigger: GCGATTCTGACAACTATGCAATGGGCTTGTCAGTAA...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTAGAGCAATCTGTCCATTaGCCAGATAAAGATGCAGAA +
Preference number: 5 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVEQSVH*PDKDAE
Trigger: TTCTGCATCTTTATCTGGCAAATGGACAGATTGCTC...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAGTCTTTCGTTGTAACTaGAGCCTTCCTGCTTTACGC +
Preference number: 5 (lower is better)
Translates to: GTGHSQLELLRGPAATTGVFRCN*SLPALR
Trigger: GCGTAAAGCAGGAAGGCTCAAGTTACAACGAAAGAC...TCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAATGGCTGACGAGGGGTTaGGAGTTGGAAAGCTTCCCG +
Preference number: 5 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQWLTRG*ELESFP
Trigger: CGGGAAGCTTTCCAACTCCAAACCCCTCGTCAGCCA...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATCCACCAATCGGGGTaGGAGGTACAATGCATCCTA +
Preference number: 5 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKIHQSG*EVQCIL
Trigger: TAGGATGCATTGTACCTCCAACCCCGATTGGTGGAT...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp TTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCCACTGTCTGCAGATGTaGCCTCTGTTCTCTGGTTTC +
Preference number: 5 (lower is better)
Translates to: FTIGTLERTSCYNRKILSHCLQM*PLFSGF
Trigger: GAAACCAGAGAACAGAGGCAACATCTGCAGACAGTG...GGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGCATCAGTCACACCACTaGTTTGGTCTTCAGTGCACC +
Preference number: 5 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKHQSHH*FGLQCT
Trigger: GGTGCACTGAAGACCAAACAAGTGGTGTGACTGATG...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCCATCAGTCACACCACTaGTTTGGTCTTCAGTGCACC +
Preference number: 5 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFHQSHH*FGLQCT
Trigger: GGTGCACTGAAGACCAAACAAGTGGTGTGACTGATG...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCAGTAATCTGGACTAGTTaGGTAAAGAAAGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: CGYVPRRGASSVHSDAVSVIWTS*VKKASP
Trigger: AGGAGAGGCTTTCTTTACCAAACTAGTCCAGATTAC...TGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ACAAACGTGAAAAGTGAATTGAACGTTGGCTACCTGATGCCCCGGTGCTATTTCGCTGACAGTGTAACTTaGCAGAGGACTACCCATCTG +
Preference number: 5 (lower is better)
Translates to: TNVKSELNVGYLMPRCYFADSVT*QRTTHL
Trigger: CAGATGGGTAGTCCTCTGCAAAGTTACACTGTCAGC...GAAATAGCACCGGGGCATCAGGTAGCCAACGTTCAATTCACTTTTCACGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCGCTGACAGTGTAACTTaGCAGAGGACTACCCATCTG +
Preference number: 5 (lower is better)
Translates to: GHSQLELLRGPAATTGRFADSVT*QRTTHL
Trigger: CAGATGGGTAGTCCTCTGCAAAGTTACACTGTCAGC...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS TCA 90 bp GACCCCTTTCCCAATGTGACAGTGCTCCTGTCTTTCGTTGTAACTTaGGCCTTCCTGCTTTACGCAAGAAATCATGGACTGAGAATGGTT +
Preference number: 5 (lower is better)
Translates to: DPFPNVTVLLSFVVT*AFLLYARNHGLRMV
Trigger: AACCATTCTCAGTCCATGATTTCTTGCGTAAAGCAGGAAGGCTCAAGTTACAACGAAAGACAGGAGCACTGTCACATTGGGAAAGGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTCACAATTGGAACTCTaGAGAGGACCAGCTGCTACA +
Preference number: 5 (lower is better)
Translates to: GHSQLELLRGPAATTGRFSQLEL*RGPAAT
Trigger: TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACATCACAATTGGAACTCTaGAGAGGACCAGCTGCTACA +
Preference number: 5 (lower is better)
Translates to: TGTGHSQLELLRGPAATTSQLEL*RGPAAT
Trigger: TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp CAGTGTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTAATCTATCCTATGTCTTaGCCGAGAAATATGAAGTCA +
Preference number: 5 (lower is better)
Translates to: QCGYVPRRGASSVHSDAVIYPMS*PRNMKS
Trigger: TGACTTCATATTTCTCGGCAAAGACATAGGATAGAT...TACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGAGTCACACCACTTGTTaGGTCTTCAGTGCACCAAAC +
Preference number: 5 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKSHTTC*VFSAPN
Trigger: GTTTGGTGCACTGAAGACCAAACAAGTGGTGTGACT...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTGTAATCTGGACTAGTTaGGTAAAGAAAGCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: QVTGTGHSQLELLRGPAAVIWTS*VKKASP
Trigger: AGGAGAGGCTTTCTTTACCAAACTAGTCCAGATTAC...AGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CTTCCTTGGAGAGCCAAAGAGACTGGTCTCATGGCTGCCGTAAGAACATGGCATTGTCCATTTAGCCCTTaGCTCTACAAAGAATGTAGT +
Preference number: 5 (lower is better)
Translates to: LPWRAKETGLMAAVRTWHCPFSP*LYKECS
Trigger: ACTACATTCTTTGTAGAGCAAAGGGCTAAATGGACA...ATGCCATGTTCTTACGGCAGCCATGAGACCAGTCTCTTTGGCTCTCCAAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GTGGATATGTCCCAAGGAGAGGAGCCAGCAGTGTCCACAGTGATGCTGTATCACAATTTTCAAAAACCCTaGGTCATGTCTGTAGATGAC +
Preference number: 5 (lower is better)
Translates to: VDMSQGEEPAVSTVMLYHNFQKP*VMSVDD
Trigger: GTCATCTACAGACATGACCAAGGGTTTTTGAAAATT...GTGATACAGCATCACTGTGGACACTGCTGGCTCCTCTCCTTGGGACATATCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCGGAGGCAACAAGCCATaGAGAGCGGCAGGGGAATGT +
Preference number: 5 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCGGNKP*RAAGEC
Trigger: ACATTCCCCTGCCGCTCTCAATGGCTTGTTGCCTCC...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACACTGCAACTGAACATATaGTGGCGTGTGAAAGTGGTC +
Preference number: 5 (lower is better)
Translates to: TGTGHSQLELLRGPAATTLQLNI*WRVKVV
Trigger: GACCACTTTCACACGCCACAATATGTTCAGTTGCAG...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCGATACATCTGGCCACTaGTACTGGCCCAATTATTCC +
Preference number: 5 (lower is better)
Translates to: FTIGTLERTSCYNRKILSDTSGH*YWPNYS
Trigger: GGAATAATTGGGCCAGTACAAGTGGCCAGATGTATC...GGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTTCTGAAAAGAACCTCTaGAAGATCTTGGCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: HSQLELLRGPAATTGRFCSEKNL*KILARV
Trigger: CACCCGGGCCAAGATCTTCAAGAGGTTCTTTTCAGA...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS TCA 90 bp TTGTTGTTTCCTTTGCATATACTGCATCTCTATGTCTACATTGTCTaGGGTCTGACTGTGGACCCCTTTCCCAATGTGACAGTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: LLFPLHILHLYVYIV*GLTVDPFPNVTVLL
Trigger: CAGGAGCACTGTCACATTGGGAAAGGGGTCCACAGTCAGACCTCAGACAATGTAGACATAGAGATGCAGTATATGCAAAGGAAACAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp AGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTGTCTTTCGTTGTAACTaGAGCCTTCCTGCTTTACGC +
Preference number: 5 (lower is better)
Translates to: RTFTIGTLERTSCYNRKIVFRCN*SLPALR
Trigger: GCGTAAAGCAGGAAGGCTCAAGTTACAACGAAAGAC...AATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATCTGTGGTATCAGGAGTaGGTTGTGGTGCTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNLWYQE*VVVLQN
Trigger: GTTCTGCAGCACCACAACCAACTCCTGATACCACAG...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTTCACAATTGGAACTCTaGAGAGGACCAGCTGCTACA +
Preference number: 5 (lower is better)
Translates to: HSQLELLRGPAATTGRFCSQLEL*RGPAAT
Trigger: TGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGA...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp GGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAAAATGGATTTCTATTaGGGTACTGTGGCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: GTGHSQLELLRGPAATTGKMDFY*GTVAAE
Trigger: CTCAGCTGCCACAGTACCCAAATAGAAATCCATTTT...TCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAGAGAATGTTTGCTTCTaGTCCCTTAACACAACTCCA +
Preference number: 5 (lower is better)
Translates to: GTGHSQLELLRGPAATTGENVCF*SLNTTP
Trigger: TGGAGTTGTGTTAAGGGACAAGAAGCAAACATTCTC...TCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp AGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGGTTGTCAGAATCGCCTaGAAGCTGTGTGTATACAAT +
Preference number: 5 (lower is better)
Translates to: RNRTFTIGTLERTSCYNRVVRIA*KLCVYN
Trigger: ATTGTATACACACAGCTTCAAGGCGATTCTGACAAC...CCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTCCAATACATATCATTaGAGGGTCATCCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GHSQLELLRGPAATTGRFSNTYH*RVILSL
Trigger: CAGGCTCAGGATGACCCTCAAATGATATGTATTGGA...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CAATGCCTAAATTGCGCAGGGTCGGGCTGGAACAGTGACCTTGAAAGCTTCATGGATGGGTTATTATTTTaGCACTCCATGTTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: QCLNCAGSGWNSDLESFMDGLLF*HSMLSD
Trigger: ATCAGACAACATGGAGTGCAAAAATAATAACCCATC...CATGAAGCTTTCAAGGTCACTGTTCCAGCCCGACCCTGCGCAATTTAGGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGATCCATTCCAAAGTGTaGATGGGCTTTGAGAACTGT +
Preference number: 5 (lower is better)
Translates to: GFGLSGDRNRTFTIGTLEIHSKV*MGFENC
Trigger: ACAGTTCTCAAAGCCCATCAACACTTTGGAATGGAT...CTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAAAGGCAGAAGTTTGTaGTTTCCTTTGCATATACTG +
Preference number: 5 (lower is better)
Translates to: GDRNRTFTIGTLERTSCYKGRSL*FPLHIL
Trigger: CAGTATATGCAAAGGAAACAACAAACTTCTGCCTTT...GTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAAAAATGGATTTCTATTaGGGTACTGTGGCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: TGTGHSQLELLRGPAATTKMDFY*GTVAAE
Trigger: CTCAGCTGCCACAGTACCCAAATAGAAATCCATTTT...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTCAAATAGTGCCTTCTaGATCAACACAGTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: SGDRNRTFTIGTLERTSCSNSAF*INTVVF
Trigger: AAAAACCACTGTGTTGATCAAGAAGGCACTATTTGA...GCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp AAGACTGAACTCGTCATTCTGCTTCCTATGCCCAAAGCAATCCTCTTCTTAGCTCCCATCACTTTGGCATaGTGTCAACAAAGCCTGATT +
Preference number: 5 (lower is better)
Translates to: KTELVILLPMPKAILFLAPITLA*CQQSLI
Trigger: AATCAGGCTTTGTTGACACAATGCCAAAGTGATGGG...AGCTAAGAAGAGGATTGCTTTGGGCATAGGAAGCAGAATGACGAGTTCAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCTTACTGACAAGCCCATaGCATAGTTGTCAGAATCGC +
Preference number: 5 (lower is better)
Translates to: LHHRILRRSSLIQKPGQILLTSP*HSCQNR
Trigger: GCGATTCTGACAACTATGCAATGGGCTTGTCAGTAA...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAATGGAGTCTGTCAGCCTaGTGCAAAAGAGATGCCCAA +
Preference number: 5 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQWSLSA*CKRDAQ
Trigger: TTGGGCATCTCTTTTGCACAAGGCTGACAGACTCCA...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CACATTAAACATACACCAGCAAGACTTGCACCATATGTGCAAAATCATTTTCTAGGAGGCAACAAGCCATaGAGAGCGGCAGGGGAATGT +
Preference number: 5 (lower is better)
Translates to: HIKHTPARLAPYVQNHFLGGNKP*RAAGEC
Trigger: ACATTCCCCTGCCGCTCTCAATGGCTTGTTGCCTCC...TAGAAAATGATTTTGCACATATGGTGCAAGTCTTGCTGGTGTATGTTTAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTCCAACGTGAAAAGTGAATaGAACGTTGGCTACCTGATG +
Preference number: 5 (lower is better)
Translates to: FTIGTLERTSCYNRKILSNVKSE*NVGYLM
Trigger: CATCAGGTAGCCAACGTTCAATTCACTTTTCACGTT...GGACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTCAGGATCAATGGATTaGTCACAGTTTCTCCACAAG +
Preference number: 5 (lower is better)
Translates to: GHSQLELLRGPAATTGRFSGSMD*SQFLHK
Trigger: CTTGTGGAGAAACTGTGACAAATCCATTGATCCTGA...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GCTTTGGACTCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGATCAGGATCAATGGATTaGTCACAGTTTCTCCACAAG +
Preference number: 5 (lower is better)
Translates to: ALDSQVTGTGHSQLELLRSGSMD*SQFLHK
Trigger: CTTGTGGAGAAACTGTGACAAATCCATTGATCCTGA...TCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGAGTCCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS CCA 90 bp GTCTTTCGTTGTAACTTGAGCCTTCCTGCTTTACGCAAGAAATCATaGACTGAGAATGGTTGGAGTCCAGGAGTTTTCCTCCACAATTTA +
Preference number: 5 (lower is better)
Translates to: VFRCNLSLPALRKKS*TENGWSPGVFLHNL
Trigger: TAAATTGTGGAGGAAAACTCCTGGACTCCAACCATTCTCAGTCCATGATTTCTTGCGTAAAGCAGGAAGGCTCAAGTTACAACGAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp AGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAAGGCAGAAGTTTGTaGTTTCCTTTGCATATACTG +
Preference number: 5 (lower is better)
Translates to: RNRTFTIGTLERTSCYNRKGRSL*FPLHIL
Trigger: CAGTATATGCAAAGGAAACAACAAACTTCTGCCTTT...CCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCATCCACCAATCGGGGTaGGAGGTACAATGCATCCTA +
Preference number: 5 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCIHQSG*EVQCIL
Trigger: TAGGATGCATTGTACCTCCAACCCCGATTGGTGGAT...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTTTGCCCCAAATAGAATaGAATATTGGTTCTCCCTAT +
Preference number: 5 (lower is better)
Translates to: GLPICWVTFSYITPTEVVLPQIE*NIGSPY
Trigger: ATAGGGAGAACCAATATTCAATTCTATTTGGGGCAA...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGAAAACACAGGACAGTaGTCACTTTTTGTAGGTATG +
Preference number: 5 (lower is better)
Translates to: TGTGHSQLELLRGPAATTENTGQ*SLFVGM
Trigger: CATACCTACAAAAAGTGACAACTGTCCTGTGTTTTC...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTTAAGCCATGAGATTTaGAACAATGCACCGTCAAGA +
Preference number: 5 (lower is better)
Translates to: GHSQLELLRGPAATTGRFLSHEI*NNAPSR
Trigger: TCTTGACGGTGCATTGTTCAAAATCTCATGGCTTAA...GAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTATACACCAGCAAGACTaGCACCATATGTGCAAAATC +
Preference number: 5 (lower is better)
Translates to: HSQLELLRGPAATTGRFCIHQQD*HHMCKI
Trigger: GATTTTGCACATATGGTGCAAGTCTTGCTGGTGTAT...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGATTTTTGCACTCCATGTaGTCTGATGTCAATTCTTCA +
Preference number: 5 (lower is better)
Translates to: GTGHSQLELLRGPAATTGFLHSM*SDVNSS
Trigger: TGAAGAATTGACATCAGACAACATGGAGTGCAAAAA...TCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTTTTTTGCACTCCATGTaGTCTGATGTCAATTCTTCA +
Preference number: 5 (lower is better)
Translates to: GLPICWVTFSYITPTEVVFLHSM*SDVNSS
Trigger: TGAAGAATTGACATCAGACAACATGGAGTGCAAAAA...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TCTCAGGTGACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGATGGGTTATTATTTTaGCACTCCATGTTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: SQVTGTGHSQLELLRGPADGLLF*HSMLSD
Trigger: ATCAGACAACATGGAGTGCAAAAATAATAACCCATC...AGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGTCACCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CTTCATCATAGGATCTTACGTAGGTCAAGCCTTATACAGAAACCTGGGCAGATCATCCATTCCAAAGTGTaGATGGGCTTTGAGAACTGT +
Preference number: 5 (lower is better)
Translates to: LHHRILRRSSLIQKPGQIIHSKV*MGFENC
Trigger: ACAGTTCTCAAAGCCCATCAACACTTTGGAATGGAT...GATCTGCCCAGGTTTCTGTATAAGGCTTGACCTACGTAAGATCCTATGATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp GGACTACCCATCTGCTGGGTGACGTTTTCCTACATTACTCCAACTGAAGTGGTTACTGAGTTCAAATGTTaGCTTTTATCTCCCTGCATT +
Preference number: 5 (lower is better)
Translates to: GLPICWVTFSYITPTEVVTEFKC*LLSPCI
Trigger: AATGCAGGGAGATAAAAGCAAACATTTGAACTCAGT...AACCACTTCAGTTGGAGTAATGTAGGAAAACGTCACCCAGCAGATGGGTAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp AGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTAACGTGAAAAGTGAATaGAACGTTGGCTACCTGATG +
Preference number: 5 (lower is better)
Translates to: RTFTIGTLERTSCYNRKINVKSE*NVGYLM
Trigger: CATCAGGTAGCCAACGTTCAATTCACTTTTCACGTT...AATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp AACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATCTATCCTATGTCTTaGCCGAGAAATATGAAGTCA +
Preference number: 5 (lower is better)
Translates to: NRTFTIGTLERTSCYNRKIYPMS*PRNMKS
Trigger: TGACTTCATATTTCTCGGCAAAGACATAGGATAGAT...CTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATGTTCTACCCATCACTTaGGCATTGTGTCAACAAAGC +
Preference number: 5 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNVLPIT*ALCQQS
Trigger: GCTTTGTTGACACAATGCCAAAGTGATGGGTAGAAC...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGTTGTCCATTTAGCCCTTaGCTCTACAAAGAATGTAGT +
Preference number: 5 (lower is better)
Translates to: HSQLELLRGPAATTGRFCCPFSP*LYKECS
Trigger: ACTACATTCTTTGTAGAGCAAAGGGCTAAATGGACA...ACAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ACAGGAACAGGACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAAATTTTCAAAAACCCTaGGTCATGTCTGTAGATGAC +
Preference number: 5 (lower is better)
Translates to: TGTGHSQLELLRGPAATTNFQKP*VMSVDD
Trigger: GTCATCTACAGACATGACCAAGGGTTTTTGAAAATT...TGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGTCCTGTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTAGACCATGTGTAACTTaGGAACAAAAGTGGTGTGCA +
Preference number: 5 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCRPCVT*EQKWCA
Trigger: TGCACACCACTTTTGTTCCAAAGTTACACATGGTCT...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGTGGAGTCTGTCAGCCTaGTGCAAAAGAGATGCCCAA +
Preference number: 5 (lower is better)
Translates to: FNLENTGQLSLFVGMALLWSLSA*CKRDAQ
Trigger: TTGGGCATCTCTTTTGCACAAGGCTGACAGACTCCA...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp AAAGCAATCCTCTTCTTAGCTGAGTACCCTGGGCAGTTTCCTTATCAATACAATGACTTTAGTAACTGCTaGCAAAATACTGGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: KAILFLAEYPGQFPYQYNDFSNC*QNTGPL
Trigger: GAGGGGACCAGTATTTTGCAAGCAGTTACTAAAGTC...ATTGTATTGATAAGGAAACTGCCCAGGGTACTCAGCTAAGAAGAGGATTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS TCA 90 bp GAGTTGGAAAGCTTCCCGAGAGCAGGTAATTTTGTAGAGAGTCAGTaGAAACCCTCAAAAAGGCAGAAGTTTGTTGTTTCCTTTGCATAT +
Preference number: 5 (lower is better)
Translates to: ELESFPRAGNFVESQ*KPSKRQKFVVSFAY
Trigger: ATATGCAAAGGAAACAACAAACTTCTGCCTTTTTGAGGGTTTTCACTGACTCTCTACAAAATTACCTGCTCTCGGGAAGCTTTCCAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS-3UTR CAA 90 bp AACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCAAGAGAATGTTTGCTTCTaGTCCCTTAACACAACTCCA +
Preference number: 5 (lower is better)
Translates to: NNAPSRVSEKCDFSNCLQENVCF*SLNTTP
Trigger: TGGAGTTGTGTTAAGGGACAAGAAGCAAACATTCTC...TTGCAAGCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ACTTTTATTGAAGACTTCATCCTGAGAAGCCTGGTGATCGATCCCTTCATAAAATCCAATACATATCATTaGAGGGTCATCCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: TFIEDFILRSLVIDPFIKSNTYH*RVILSL
Trigger: CAGGCTCAGGATGACCCTCAAATGATATGTATTGGA...TTTTATGAAGGGATCGATCACCAGGCTTCTCAGGATGAAGTCTTCAATAAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS-3UTR CAA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGGATACATCTGGCCACTaGTACTGGCCCAATTATTCC +
Preference number: 5 (lower is better)
Translates to: FNLENTGQLSLFVGMALLDTSGH*YWPNYS
Trigger: GGAATAATTGGGCCAGTACAAGTGGCCAGATGTATC...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ACATTCACAATTGGAACTCTTGAGAGGACCAGCTGCTACAACAGGAAGATTCTGACTGAGTTCAAATGTTaGCTTTTATCTCCCTGCATT +
Preference number: 5 (lower is better)
Translates to: TFTIGTLERTSCYNRKILTEFKC*LLSPCI
Trigger: AATGCAGGGAGATAAAAGCAAACATTTGAACTCAGT...CAGAATCTTCCTGTTGTAGCAGCTGGTCCTCTCAAGAGTTCCAATTGTGAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGGGCCTTGGCATGCTCTaGAACTTAAACACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: FNLENTGQLSLFVGMALLGLGML*NLNTAK
Trigger: TTTGGCTGTGTTTAAGTTCAAGAGCATGCCAAGGCC...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CTACTGTTGTTGCAGTTAAGTGGTTCTGAACGGGCCCAAATAGTTTTCCAATGTTCAAATAGTGCCTTCTaGATCAACACAGTGGTTTTT +
Preference number: 5 (lower is better)
Translates to: LLLLQLSGSERAQIVFQCSNSAF*INTVVF
Trigger: AAAAACCACTGTGTTGATCAAGAAGGCACTATTTGA...ACATTGGAAAACTATTTGGGCCCGTTCAGAACCACTTAACTGCAACAACAGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGGAGCAATCTGTCCATTaGCCAGATAAAGATGCAGAA +
Preference number: 5 (lower is better)
Translates to: FNLENTGQLSLFVGMALLEQSVH*PDKDAE
Trigger: TTCTGCATCTTTATCTGGCAAATGGACAGATTGCTC...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp TTTAATTTGGAAAACACAGGACAGTTGTCACTTTTTGTAGGTATGGCTCTTCTGATACACCAGCAAGACTaGCACCATATGTGCAAAATC +
Preference number: 5 (lower is better)
Translates to: FNLENTGQLSLFVGMALLIHQQD*HHMCKI
Trigger: GATTTTGCACATATGGTGCAAGTCTTGCTGGTGTAT...CAGAAGAGCCATACCTACAAAAAGTGACAACTGTCCTGTGTTTTCCAAATTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCAAAGGCAGAAGTTTGTaGTTTCCTTTGCATATACTG +
Preference number: 5 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCKGRSL*FPLHIL
Trigger: CAGTATATGCAAAGGAAACAACAAACTTCTGCCTTT...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp ATTTTGAACAATGCACCGTCAAGAGTCAGTGAGAAATGTGACTTTAGTAACTGCTTGCCCCAAATAGAATaGAATATTGGTTCTCCCTAT +
Preference number: 5 (lower is better)
Translates to: ILNNAPSRVSEKCDFSNCLPQIE*NIGSPY
Trigger: ATAGGGAGAACCAATATTCAATTCTATTTGGGGCAA...GCAGTTACTAAAGTCACATTTCTCACTGACTCTTGACGGTGCATTGTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS-3UTR CAA 90 bp CACATTAAACATACACCAGCAAGACTTGCACCATATGTGCAAAATCATTTTCTAAGACCATGTGTAACTTaGGAACAAAAGTGGTGTGCA +
Preference number: 5 (lower is better)
Translates to: HIKHTPARLAPYVQNHFLRPCVT*EQKWCA
Trigger: TGCACACCACTTTTGTTCCAAAGTTACACATGGTCT...TAGAAAATGATTTTGCACATATGGTGCAAGTCTTGCTGGTGTATGTTTAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS CCA 72 bp CCGCCTGCCCGCCGGGTCTGCCCTGGTGCGCGCGTGTaGGAGGGTGTGTGTCTGTGCCGTGGCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: PPARRVCPGARV*EGVCLCRGRRR
Trigger: GCGGCGGCGGCCACGGCACAGACACACACCCTCCCACACGCGCGCACCAGGGCAGACCCGGCGGGCAGGCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS CCA 72 bp GGGGACGCGGGCGGCGGCTGCGCCGGAGTCCTCAAGTaGCCCTGGGATGTGGCGGGCGTGCAGGACGGCGAC +
Preference number: 6 (lower is better)
Translates to: GDAGGGCAGVLK*PWDVAGVQDGD
Trigger: GTCGCCGTCCTGCACGCCCGCCACATCCCAGGGCCACTTGAGGACTCCGGCGCAGCCGCCGCCCGCGTCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS GCA 72 bp TGCCCTGGTGCGCGCGTGTGGGAGGGTGTGTGTCTGTaGCGTGGCCGCCGCCGCCGCCGCCTGTCGCTGAGG +
Preference number: 6 (lower is better)
Translates to: CPGARVWEGVCL*RGRRRRRLSLR
Trigger: CCTCAGCGACAGGCGGCGGCGGCGGCGGCCACGGCACAGACACACACCCTCCCACACGCGCGCACCAGGGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS CCA 72 bp GCGGGGGCGCCCGCACGTGCGGCAGCTCCACCAGGGTaGGTCGCTCGTAGCGCTTGGCCAGCGCCGGTCTCT +
Preference number: 6 (lower is better)
Translates to: AGAPARAAAPPG*VARSAWPAPVS
Trigger: AGAGACCGGCGCTGGCCAAGCGCTACGAGCGACCCACCCTGGTGGAGCTGCCGCACGTGCGGGCGCCCCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS CCA 72 bp GCGGGCGGCGGCTGCGCCGGAGTCCTCAAGTGGCCCTaGGATGTGGCGGGCGTGCAGGACGGCGACGACGAC +
Preference number: 6 (lower is better)
Translates to: AGGGCAGVLKWP*DVAGVQDGDDD
Trigger: GTCGTCGTCGCCGTCCTGCACGCCCGCCACATCCCAGGGCCACTTGAGGACTCCGGCGCAGCCGCCGCCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS CCA 72 bp GCGGCTGCGCCGGAGTCCTCAAGTGGCCCTGGGATGTaGCGGGCGTGCAGGACGGCGACGACGACGAAGCGG +
Preference number: 6 (lower is better)
Translates to: AAAPESSSGPGM*RACRTATTTKR
Trigger: CCGCTTCGTCGTCGTCGCCGTCCTGCACGCCCGCCACATCCCAGGGCCACTTGAGGACTCCGGCGCAGCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS GCA 72 bp TTAGAGACCCAGATGTGGACTCGAGGCTTCTGCGGCTaGGGGCGGGGTCCGGCTTCCGAAACGAGCTCGTGG +
Preference number: 6 (lower is better)
Translates to: LETQMWTRGFCG*GRGPASETSSW
Trigger: CCACGAGCTCGTTTCGGAAGCCGGACCCCGCCCGCAGCCGCAGAAGCCTCGAGTCCACATCTGGGTCTCTAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS GCA 72 bp GAGACTTTAGAGACCCAGATGTGGACTCGAGGCTTCTaGGGCTGCGGGCGGGGTCCGGCTTCCGAAACGAGC +
Preference number: 6 (lower is better)
Translates to: ETLETQMWTRGF*GCGRGPASETS
Trigger: GCTCGTTTCGGAAGCCGGACCCCGCCCGCAGCCGCAGAAGCCTCGAGTCCACATCTGGGTCTCTAAAGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS TCA 72 bp GCTTGGCCAGCGCCGGTCTCTTGCTGGGGAACGTCTTaGGGACGCTGTAGGGGCTGCGCTGCTTGTAGATTT +
Preference number: 6 (lower is better)
Translates to: AWPAPVSCWGTS*GRCRGCAACRF
Trigger: AAATCTACAAGCAGCGCAGCCCCTACAGCGTCCTCAAGACGTTCCCCAGCAAGAGACCGGCGCTGGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000504360.5
CDS TCA 72 bp CTCGTCCTCCTCCTCCTCCTCTTCTGGCAGTGTAGATaGAGATGGGTGGCCATGGGATTCGGACGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: LVLLLLLFWQCR*RWVAMGFGRCW
Trigger: CCAGCAACGTCCGAATCCCATGGCCACCCATCTTCATCTACACTGCCAGAAGAGGAGGAGGAGGAGGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS GCA 72 bp TCGGACGTTGCTGGGGAAGTCCAGCCACCTAATGTATaGACAGGAGAGGTTGACAGAGGATCCACGTCGGCC +
Preference number: 6 (lower is better)
Translates to: SDVAGEVQPPNV*TGEVDRGSTSA
Trigger: GGCCGACGTGGATCCTCTGTCAACCTCTCCTGTGCATACATTAGGTGGCTGGACTTCCCCAGCAACGTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS GCA 72 bp CTGCTGGGCAAAGGCATCCAAGATCATTCGACTCTCTaGGCTGAGCTCCAGGCTGGGGAACGTCTTGAGGAC +
Preference number: 6 (lower is better)
Translates to: LLGKGIQDHSTL*AELQAGERLED
Trigger: GTCCTCAAGACGTTCCCCAGCCTGGAGCTCAGCGCAGAGAGTCGAATGATCTTGGATGCCTTTGCCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611697.1
CDS CCA 72 bp CAACAGCTGCTTGCTTCCCTCTGTCGGCTGGTCAGCTaGCTGTGGTATCAGGAGTTGGTTGTGGTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: QQLLASLCRLVS*LWYQELVVVLQ
Trigger: CTGCAGCACCACAACCAACTCCTGATACCACAGCCAGCTGACCAGCCGACAGAGGGAAGCAAGCAGCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS TCA 72 bp AGGATCCACGTCGGCCAGATGGCCATATTCACTGGCTaGCGAGGGGTTTGGAGTTGGAAAGCTTCCCGAGAG +
Preference number: 6 (lower is better)
Translates to: RIHVGQMAIFTG*RGVWSWKASRE
Trigger: CTCTCGGGAAGCTTTCCAACTCCAAACCCCTCGTCAGCCAGTGAATATGGCCATCTGGCCGACGTGGATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CCA 72 bp ACAGAGGATCCACGTCGGCCAGATGGCCATATTCACTaGCTGACGAGGGGTTTGGAGTTGGAAAGCTTCCCG +
Preference number: 6 (lower is better)
Translates to: TEDPRRPDGHIH*LTRGLELESFP
Trigger: CGGGAAGCTTTCCAACTCCAAACCCCTCGTCAGCCAGTGAATATGGCCATCTGGCCGACGTGGATCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CCA 72 bp ACAGGAGAGGTTGACAGAGGATCCACGTCGGCCAGATaGCCATATTCACTGGCTGACGAGGGGTTTGGAGTT +
Preference number: 6 (lower is better)
Translates to: TGEVDRGSTSAR*PYSLADEGFGV
Trigger: AACTCCAAACCCCTCGTCAGCCAGTGAATATGGCCATCTGGCCGACGTGGATCCTCTGTCAACCTCTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS TCA 72 bp GGGAATTGCTCTCCGATCCTTCTGAAAAGAACCTCTTaGAGATCTTGGCCCGGGTGGTCGCGCGGTGTTTAC +
Preference number: 6 (lower is better)
Translates to: GNCSPILLKRTS*RSWPGWSRGVY
Trigger: GTAAACACCGCGCGACCACCCGGGCCAAGATCTTCAAGAGGTTCTTTTCAGAAGGATCGGAGAGCAATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS CAA 72 bp GGGAAGTCCAGCCACCTAATGTATGCACAGGAGAGGTaGACAGAGGATCCACGTCGGCCAGATGGCCATATT +
Preference number: 6 (lower is better)
Translates to: GKSSHLMYAQER*TEDPRRPDGHI
Trigger: AATATGGCCATCTGGCCGACGTGGATCCTCTGTCAACCTCTCCTGTGCATACATTAGGTGGCTGGACTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CAA 90 bp TCTACCAATCGGGAATTGCTCTCCGATCCTTCTGAAAAGAACCTCTaGAAGATCTTGGCCCGGGTGGTCGCGCGGTGTTTACGGGGCTTT +
Preference number: 6 (lower is better)
Translates to: STNRELLSDPSEKNL*KILARVVARCLRGF
Trigger: AAAGCCCCGTAAACACCGCGCGACCACCCGGGCCAAGATCTTCAAGAGGTTCTTTTCAGAAGGATCGGAGAGCAATTCCCGATTGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS CAA 72 bp CGGCCAGATGGCCATATTCACTGGCTGACGAGGGGTTaGGAGTTGGAAAGCTTCCCGAGAGCAGGTAATTTT +
Preference number: 6 (lower is better)
Translates to: RPDGHIHWLTRG*ELESFPRAGNF
Trigger: AAAATTACCTGCTCTCGGGAAGCTTTCCAACTCCAAACCCCTCGTCAGCCAGTGAATATGGCCATCTGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CAA 90 bp GATCCACGTCGGCCAGATGGCCATATTCACTGGCTGACGAGGGGTTaGGAGTTGGAAAGCTTCCCGAGAGCAGGTAATTTTGTAGAGAGT +
Preference number: 6 (lower is better)
Translates to: DPRRPDGHIHWLTRG*ELESFPRAGNFVES
Trigger: ACTCTCTACAAAATTACCTGCTCTCGGGAAGCTTTCCAACTCCAAACCCCTCGTCAGCCAGTGAATATGGCCATCTGGCCGACGTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CCA 72 bp CCACAATTTAAGAGGCTAAGAACTCGACTGCACTGCTaGGCAAAGGCATCCAAGATCATTCGACTCTCTGCG +
Preference number: 6 (lower is better)
Translates to: PQFKRLRTRLHC*AKASKIIRLSA
Trigger: CGCAGAGAGTCGAATGATCTTGGATGCCTTTGCCCAGCAGTGCAGTCGAGTTCTTAGCCTCTTAAATTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CAA 72 bp TTTATCTGCTCTTCCGAGGGCATCCACCAATCGGGGTaGGAGGTACAATGCATCCTAATGAATTCTCGGAGG +
Preference number: 6 (lower is better)
Translates to: FICSSEGIHQSG*EVQCILMNSRR
Trigger: CCTCCGAGAATTCATTAGGATGCATTGTACCTCCAACCCCGATTGGTGGATGCCCTCGGAAGAGCAGATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000611697.1
CDS GCA 72 bp CCTCCACAATTTAAGAGGCTAAGAACTCGACTGCACTaGTGGGCAAAGGCATCCAAGATCATTCGACTCTCT +
Preference number: 6 (lower is better)
Translates to: PPQFKRLRTRLH*WAKASKIIRLS
Trigger: AGAGAGTCGAATGATCTTGGATGCCTTTGCCCAGCAGTGCAGTCGAGTTCTTAGCCTCTTAAATTGTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS GCA 72 bp TCCGAGGGCATCCACCAATCGGGGTTGGAGGTACAATaGATCCTAATGAATTCTCGGAGGCATGTTACTTTA +
Preference number: 6 (lower is better)
Translates to: SEGIHQSGLEVQ*ILMNSRRHVTL
Trigger: TAAAGTAACATGCCTCCGAGAATTCATTAGGATGCATTGTACCTCCAACCCCGATTGGTGGATGCCCTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000611697.1
CDS CAA 90 bp GGACCCCTTTCCCAATGTGACAGTGCTCCTGTCTTTCGTTGTAACTaGAGCCTTCCTGCTTTACGCAAGAAATCATGGACTGAGAATGGT +
Preference number: 6 (lower is better)
Translates to: GPLSQCDSAPVFRCN*SLPALRKKSWTENG
Trigger: ACCATTCTCAGTCCATGATTTCTTGCGTAAAGCAGGAAGGCTCAAGTTACAACGAAAGACAGGAGCACTGTCACATTGGGAAAGGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CAA 90 bp AACACTTTGTTTATCTGCTCTTCCGAGGGCATCCACCAATCGGGGTaGGAGGTACAATGCATCCTAATGAATTCTCGGAGGCATGTTACT +
Preference number: 6 (lower is better)
Translates to: NTLFICSSEGIHQSG*EVQCILMNSRRHVT
Trigger: AGTAACATGCCTCCGAGAATTCATTAGGATGCATTGTACCTCCAACCCCGATTGGTGGATGCCCTCGGAAGAGCAGATAAACAAAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502486.6
ENST00000611697.1
CDS TCA 72 bp CTTGAGCCTTCCTGCTTTACGCAAGAAATCATGGACTaGGAATGGTTGGAGTCCAGGAGTTTTCCTCCACAA +
Preference number: 6 (lower is better)
Translates to: LEPSCFTQEIMD*EWLESRSFPPQ
Trigger: TTGTGGAGGAAAACTCCTGGACTCCAACCATTCTCAGTCCATGATTTCTTGCGTAAAGCAGGAAGGCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS TCA 72 bp CCCAATGTGACAGTGCTCCTGTCTTTCGTTGTAACTTaGGCCTTCCTGCTTTACGCAAGAAATCATGGACTG +
Preference number: 6 (lower is better)
Translates to: PNVTVLLSFVVT*AFLLYARNHGL
Trigger: CAGTCCATGATTTCTTGCGTAAAGCAGGAAGGCTCAAGTTACAACGAAAGACAGGAGCACTGTCACATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CCA 72 bp TGTAACTTGAGCCTTCCTGCTTTACGCAAGAAATCATaGACTGAGAATGGTTGGAGTCCAGGAGTTTTCCTC +
Preference number: 6 (lower is better)
Translates to: CNLSLPALRKKS*TENGWSPGVFL
Trigger: GAGGAAAACTCCTGGACTCCAACCATTCTCAGTCCATGATTTCTTGCGTAAAGCAGGAAGGCTCAAGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CAA 72 bp TCCCAATGTGACAGTGCTCCTGTCTTTCGTTGTAACTaGAGCCTTCCTGCTTTACGCAAGAAATCATGGACT +
Preference number: 6 (lower is better)
Translates to: SQCDSAPVFRCN*SLPALRKKSWT
Trigger: AGTCCATGATTTCTTGCGTAAAGCAGGAAGGCTCAAGTTACAACGAAAGACAGGAGCACTGTCACATTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CAA 72 bp TTTATCTGCTCTTCCGAGGGCATCCACCAATCGGGGTaGGAGGTACAATGCATCCTAATGAATTCTTTTCCT +
Preference number: 6 (lower is better)
Translates to: FICSSEGIHQSG*EVQCILMNSFP
Trigger: AGGAAAAGAATTCATTAGGATGCATTGTACCTCCAACCCCGATTGGTGGATGCCCTCGGAAGAGCAGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS TCA 72 bp AGCTTCCCGAGAGCAGGTAATTTTGTAGAGAGTCAGTaGAAACCCTCAAAAAGGCAGAAGTTTGTTGTTTCC +
Preference number: 6 (lower is better)
Translates to: SFPRAGNFVESQ*KPSKRQKFVVS
Trigger: GGAAACAACAAACTTCTGCCTTTTTGAGGGTTTTCACTGACTCTCTACAAAATTACCTGCTCTCGGGAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1
CDS CAA 72 bp GTGTGTATTACAGCAAGTTCTTCTACCAATCGGGAATaGCTCTCCGATCCTTCTGAAAAGAACCTCTTGAAG +
Preference number: 6 (lower is better)
Translates to: VCITASSSTNRE*LSDPSEKNLLK
Trigger: CTTCAAGAGGTTCTTTTCAGAAGGATCGGAGAGCAATTCCCGATTGGTAGAAGAACTTGCTGTAATACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504360.5
CDS GCA 72 bp CTTTCTTTGAAGAATTTACAGCCTCATCCCACTGTTTaGTCGTTATGTAGACAGGATAGTTGTTCAACAGCT +
Preference number: 6 (lower is better)
Translates to: LSLKNLQPHPTV*SLCRQDSCSTA
Trigger: AGCTGTTGAACAACTATCCTGTCTACATAACGAGCAAACAGTGGGATGAGGCTGTAAATTCTTCAAAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502486.6
ENST00000504360.5
ENST00000611697.1