RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BEAN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000166546

Ensembl transcript IDs: ENST00000299694.12, ENST00000536005.7, ENST00000561796.5, ENST00000562146.1, ENST00000562849.6, ENST00000563075.1, ENST00000564819.5, ENST00000566654.1, ENST00000569272.1, ENST00000618932.1, ENST00000622872.4

Found 717 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGACCCATTCGCGTGCAGGCCACAGTGGTCGGCCAGGCAGGGACTaGGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGC +
Preference number: 1 (lower is better)
Translates to: LTHSRAGHSGRPGRD*GRGHFSASERCPGS
Trigger: GCTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTGCCTGGCCGACCACTGTGGCCTGCACGCGAATGGGTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR TCA 90 bp CTCATCCCAGGGTCTGGCCCTGGGGCCCCTGTCTCCATCGTCCTGTaGTGCAGCTTCACCTTCCATCTCCTTGGGCCTCTGATGAGCCCA +
Preference number: 1 (lower is better)
Translates to: LIPGSGPGAPVSIVL*CSFTFHLLGPLMSP
Trigger: TGGGCTCATCAGAGGCCCAAGGAGATGGAAGGTGAAGCTGCATCACAGGACGATGGAGACAGGGGCCCCAGGGCCAGACCCTGGGATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 90 bp CCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTaGTGGAGCCCTTTGCAGAGACCTGGGACCTCACCACACCCATAC +
Preference number: 1 (lower is better)
Translates to: PPSSGRCLLLVCGSS*WSPLQRPGTSPHPY
Trigger: GTATGGGTGTGGTGAGGTCCCAGGTCTCTGCAAAGGGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 90 bp CTACTCTGTGTCTCAGAGTCACCAGTGGGACTGCGCTCAGTGGCCTaGAGTGGTGACCTGCTTGGTGACCCCCTCACTGGCTTCCTTGCC +
Preference number: 1 (lower is better)
Translates to: LLCVSESPVGLRSVA*SGDLLGDPLTGFLA
Trigger: GGCAAGGAAGCCAGTGAGGGGGTCACCAAGCAGGTCACCACTGCAGGCCACTGAGCGCAGTCCCACTGGTGACTCTGAGACACAGAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR TCA 90 bp GGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCACTGTGGTaGAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGAC +
Preference number: 1 (lower is better)
Translates to: GATSLPQRGAQAALW*SHLEKGNGLIFLED
Trigger: GTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACAGTGCTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR GCA 90 bp AGAGTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATaGTTGGCTGCCACCCTCTGTGGGCTGGGTCTTCAGGAATCACCT +
Preference number: 1 (lower is better)
Translates to: RVMAAGDASRDTAQR*LAATLCGLGLQESP
Trigger: AGGTGATTCCTGAAGACCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 90 bp CAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCACCTTGTAAGTaGCAGGGTGGTGATGTTGTGGCTCATCTGCCCTGGAATCGAGAG +
Preference number: 1 (lower is better)
Translates to: QFAPETPDPGPPPCK*QGGDVVAHLPWNRE
Trigger: CTCTCGATTCCAGGGCAGATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 90 bp ACAGTCCCAAAGGCCTGTGGGATCCTAAGTCTTTGTGGTGGGAGCTaGGTGTCGGTGTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCT +
Preference number: 1 (lower is better)
Translates to: TVPKACGILSLCGGS*VSVWGGFGWGQHMA
Trigger: AGCCATGTGCTGCCCCCAACCGAAACCACCCCACACCGACACCCAGCTCCCACCACAAAGACTTAGGATCCCACAGGCCTTTGGGACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 90 bp CAAGAGCGTGACAGTCCCAAAGGCCTGTGGGATCCTAAGTCTTTGTaGTGGGAGCTGGGTGTCGGTGTGGGGTGGTTTCGGTTGGGGGCA +
Preference number: 1 (lower is better)
Translates to: QERDSPKGLWDPKSL*WELGVGVGWFRLGA
Trigger: TGCCCCCAACCGAAACCACCCCACACCGACACCCAGCTCCCACCACAAAGACTTAGGATCCCACAGGCCTTTGGGACTGTCACGCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR TCA 90 bp TTGCAGAGACCTGGGACCTCACCACACCCATACACGGGGACCCAATaGTGGCTCTTGTGGACTATCACGATGGCGTCATCGCCAGCACGG +
Preference number: 1 (lower is better)
Translates to: LQRPGTSPHPYTGTQ*WLLWTITMASSPAR
Trigger: CCGTGCTGGCGATGACGCCATCGTGATAGTCCACAAGAGCCATCATTGGGTCCCCGTGTATGGGTGTGGTGAGGTCCCAGGTCTCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 90 bp GGTTGGGGGCAGCACATGGCTGGACACCATCACTGTGGAAGTTTCTaGATTCATTCCCAGGAGGTGGAGCCCCAGAGCACTGAGGTGGCA +
Preference number: 1 (lower is better)
Translates to: GWGQHMAGHHHCGSF*IHSQEVEPQSTEVA
Trigger: TGCCACCTCAGTGCTCTGGGGCTCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 90 bp CAAACAACCCGTCTCTCCCACCTGAGGGCGGGCGTCACTTTGAGGTaGGTTCTACTCTGTGTCTCAGAGTCACCAGTGGGACTGCGCTCA +
Preference number: 1 (lower is better)
Translates to: QTTRLSHLRAGVTLR*VLLCVSESPVGLRS
Trigger: TGAGCGCAGTCCCACTGGTGACTCTGAGACACAGAGTAGAACGCACCTCAAAGTGACGCCCGCCCTCAGGTGGGAGAGACGGGTTGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 90 bp ACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTaGTTGTGTGTGGCAGCAGCTGCTGGAGCCCTTTGCAGAGACCTG +
Preference number: 1 (lower is better)
Translates to: TLYQPSFRPLLGDAC*LCVAAAAGALCRDL
Trigger: CAGGTCTCTGCAAAGGGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 90 bp CAGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATaGCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCCTTTGCAG +
Preference number: 1 (lower is better)
Translates to: QPYSVSTLLPPSSGR*LLLVCGSSCWSPLQ
Trigger: CTGCAAAGGGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 90 bp GGAGCTGGGTGTCGGTGTGGGGTGGTTTCGGTTGGGGGCAGCACATaGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGG +
Preference number: 1 (lower is better)
Translates to: GAGCRCGVVSVGGST*LDTITVEVSAFIPR
Trigger: CCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCACACCGACACCCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 90 bp GTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCCTTTGCAGAGACCTaGGACCTCACCACACCCATACACGGGGACCCAATGATGGCTCTT +
Preference number: 1 (lower is better)
Translates to: VACVWQQLLEPFAET*DLTTPIHGDPMMAL
Trigger: AAGAGCCATCATTGGGTCCCCGTGTATGGGTGTGGTGAGGTCCCAGGTCTCTGCAAAGGGCTCCAGCAGCTGCTGCCACACACAAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 90 bp CCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATCTGCCCTaGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGG +
Preference number: 1 (lower is better)
Translates to: PPCKWQGGDVVAHLP*NREIGTAHNGTSLG
Trigger: CCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAGATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 90 bp CTCTGCCTCAGAGAGGTGCCCAGGCAGCACTGTGGTGAAGCCACCTaGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTAGTCCT +
Preference number: 1 (lower is better)
Translates to: LCLREVPRQHCGEAT*RRAMASSSLKTLSP
Trigger: AGGACTAAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACAGTGCTGCCTGGGCACCTCTCTGAGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 90 bp CTGGGTGTCGGTGTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTaGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGAGGT +
Preference number: 1 (lower is better)
Translates to: LGVGVGWFRLGAAHG*TPSLWKFLHSFPGG
Trigger: ACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCACACCGACACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 90 bp GTCTCTCCACCGCTCATGCCAAGAGCCTGGACATGCAGGTGGGCATaGATAGGAACAGCTGAGTGGGAGTGTCAGTGGCACTGGAGTATG +
Preference number: 1 (lower is better)
Translates to: VSPPLMPRAWTCRWA*IGTAEWECQWHWSM
Trigger: CATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCATGCCCACCTGCATGTCCAGGCTCTTGGCATGAGCGGTGGAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 90 bp CTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGGACATGCAGGTaGGCATGGATAGGAACAGCTGAGTGGGAGTGTCAGTGGCACTGG +
Preference number: 1 (lower is better)
Translates to: LTVSPPLMPRAWTCR*AWIGTAEWECQWHW
Trigger: CCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCATGCCCACCTGCATGTCCAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR TCA 90 bp ACTGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTaGAGACCCTTAGTCCTGGGCAGTGGCTGGACTGATGAGGGAACC +
Preference number: 1 (lower is better)
Translates to: TVVKPPGEGQWPHLP*RPLVLGSGWTDEGT
Trigger: GGTTCCCTCATCAGTCCAGCCACTGCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR TCA 90 bp TTGTGTTTCAAGGTGAGAGGAGGGGCTTCCTCATTCTTCAGGGCCTaGCTTGTTCACTTTGAGCAGTGGCAGCAGCGAGCCGGCAGGTGG +
Preference number: 1 (lower is better)
Translates to: LCFKVRGGASSFFRA*LVHFEQWQQRAGRW
Trigger: CCACCTGCCGGCTCGCTGCTGCCACTGCTCAAAGTGAACAAGTCAGGCCCTGAAGAATGAGGAAGCCCCTCCTCTCACCTTGAAACACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR TCA 90 bp GGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGGCTaGCCCTACAAATCCCCTTCTGTGGCAGCAAGGCTGAGTAGCCTT +
Preference number: 1 (lower is better)
Translates to: GVSWSRSEPAFLQPG*PYKSPSVAARLSSL
Trigger: AAGGCTACTCAGCCTTGCTGCCACAGAAGGGGATTTGTAGGGTCAGCCTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR TCA 90 bp TGTGGGCTTGGCCAGTGTGACAATGGATGTTCCTCGTGGTGGCTGTaGACAGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGG +
Preference number: 1 (lower is better)
Translates to: CGLGQCDNGCSSWWL*TALLCINPPSALFW
Trigger: CCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCTGTTCACAGCCACCACGAGGAACATCCATTGTCACACTGGCCAAGCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR TCA 90 bp CATGCCAAGAGCCTGGACATGCAGGTGGGCATGGATAGGAACAGCTaGGTGGGAGTGTCAGTGGCACTGGAGTATGCAACACCAAGTGTG +
Preference number: 1 (lower is better)
Translates to: HAKSLDMQVGMDRNS*VGVSVALEYATPSV
Trigger: CACACTTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCATGCCCACCTGCATGTCCAGGCTCTTGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 90 bp ATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGGACATaGAGGTGGGCATGGATAGGAACAGCTGAGTGGGAGTGTCAGTGG +
Preference number: 1 (lower is better)
Translates to: MKLTVSPPLMPRAWT*RWAWIGTAEWECQW
Trigger: CCACTGACACTCCCACTCAGCTGTTCCTATCCATGCCCACCTGCATGTCCAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 90 bp TGTGGTGCCATATGTGACACACCACAGCATAGGGCATGTCGTGGATaGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCCTG +
Preference number: 1 (lower is better)
Translates to: CGAICDTPQHRACRG*RSRKSQERDSPKGL
Trigger: CAGGCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGCCCTATGCTGTGGTGTGTCACATATGGCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 90 bp CCAAGAGCCTGGACATGCAGGTGGGCATGGATAGGAACAGCTGAGTaGGAGTGTCAGTGGCACTGGAGTATGCAACACCAAGTGTGTACG +
Preference number: 1 (lower is better)
Translates to: PRAWTCRWAWIGTAE*ECQWHWSMQHQVCT
Trigger: CGTACACACTTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCATGCCCACCTGCATGTCCAGGCTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 90 bp CAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTaGACATGCAGGTGGGCATGGATAGGAACAGCTGAGTGGGAGTGT +
Preference number: 1 (lower is better)
Translates to: QTMKLTVSPPLMPRA*TCRWAWIGTAEWEC
Trigger: ACACTCCCACTCAGCTGTTCCTATCCATGCCCACCTGCATGTCCAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR TCA 90 bp TGCAGCCAGGCTGACCCTACAAATCCCCTTCTGTGGCAGCAAGGCTaGGTAGCCTTCTGGTCCTCTTGTGGTGGCAAGGTGGTATTTATG +
Preference number: 1 (lower is better)
Translates to: CSQADPTNPLLWQQG*VAFWSSCGGKVVFM
Trigger: CATAAATACCACCTTGCCACCACAAGAGGACCAGAAGGCTACTCAGCCTTGCTGCCACAGAAGGGGATTTGTAGGGTCAGCCTGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR GCA 90 bp TATGAGTCACGTGTGCATCTCTGTGTGTGTGTGCACGCCTTTGTGTaGCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGG +
Preference number: 1 (lower is better)
Translates to: YESRVHLCVCVHAFV*LKNVVQPVGTSRTR
Trigger: CCGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCGTGCACACACACACAGAGATGCACACGTGACTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR TCA 90 bp TGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTaGGCCAGCCTTTCTGCAGCCAGGCTGACCCTACAAATCCCCTTC +
Preference number: 1 (lower is better)
Translates to: CVVFDGNRWGFLVKI*ASLSAARLTLQIPF
Trigger: GAAGGGGATTTGTAGGGTCAGCCTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR TCA 90 bp GTGGGCTGGGTCTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTTaGTGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCT +
Preference number: 1 (lower is better)
Translates to: VGWVFRNHLCYLRGL*WKSLGFLGQDLSQP
Trigger: AGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAGACCCAGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR GCA 90 bp TGCCACCCTCTGTGGGCTGGGTCTTCAGGAATCACCTCTGTTACCTaGGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATC +
Preference number: 1 (lower is better)
Translates to: CHPLWAGSSGITSVT*VVFDGNRWGFLVKI
Trigger: GATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAGACCCAGCCCACAGAGGGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 90 bp ACATGCAGGTGGGCATGGATAGGAACAGCTGAGTGGGAGTGTCAGTaGCACTGGAGTATGCAACACCAAGTGTGTACGTGCACAAGCTCT +
Preference number: 1 (lower is better)
Translates to: TCRWAWIGTAEWECQ*HWSMQHQVCTCTSS
Trigger: AGAGCTTGTGCACGTACACACTTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCATGCCCACCTGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 90 bp TCCCAGGAGGTGGAGCCCCAGAGCACTGAGGTGGCACCAGAGCCATaGCTAGTGATGTTCAGAACAGAGGGCATGCAAAATGATTATTTT +
Preference number: 1 (lower is better)
Translates to: SQEVEPQSTEVAPEP*LVMFRTEGMQNDYF
Trigger: AAAATAATCATTTTGCATGCCCTCTGTTCTGAACATCACTAGGCATGGCTCTGGTGCCACCTCAGTGCTCTGGGGCTCCACCTCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 90 bp ACCCTCTGTGGGCTGGGTCTTCAGGAATCACCTCTGTTACCTGCGTaGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAG +
Preference number: 1 (lower is better)
Translates to: TLCGLGLQESPLLPA*SLMEIAGVSWSRSE
Trigger: CTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAGACCCAGCCCACAGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR TCA 90 bp GAAGCAAAGCAGAGACCAGGACAGAAGATTCACTTCCTCAGACGATaGAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGGACAT +
Preference number: 1 (lower is better)
Translates to: EAKQRPGQKIHFLRR*SLLSLHRSCQEPGH
Trigger: ATGTCCAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGTGAATCTTCTGTCCTGGTCTCTGCTTTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 90 bp CTTCCTTGCCTTTCTTGTTTCCTGCCTCACTCCATCTGGTACTCCTaGGAACACTTCCCTAACCAAACTCTCACCCACATCCTCATCCCA +
Preference number: 1 (lower is better)
Translates to: LPCLSCFLPHSIWYS*EHFPNQTLTHILIP
Trigger: TGGGATGAGGATGTGGGTGAGAGTTTGGTTAGGGAAGTGTTCCCAGGAGTACCAGATGGAGTGAGGCAGGAAACAAGAAAGGCAAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 90 bp ACGGAACCTCACTGGGGCCTGTATGTGCGCATATTCACACATATGTaGAGCACGTCTAGATCTGTGTGTGTACATGGGGTATGTCAGTGT +
Preference number: 1 (lower is better)
Translates to: TEPHWGLYVRIFTHM*STSRSVCVHGVCQC
Trigger: ACACTGACATACCCCATGTACACACACAGATCTAGACGTGCTCCACATATGTGTGAATATGCGCACATACAGGCCCCAGTGAGGTTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562849.6
3UTR GCA 90 bp TCATTGCCACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTaGTACAAGCCAACTCCTGTTAGAGTAAAACGTGTAGTCTCTGAA +
Preference number: 1 (lower is better)
Translates to: SLPLSSLSWWYKPSG*YKPTPVRVKRVVSE
Trigger: TTCAGAGACTACACGTTTTACTCTAACAGGAGTTGGCTTGTAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTGGCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 90 bp TATCCAAATATCCACATCAACAGGAAAATGACAAGGCTTCAATGGTaGTTAATCTTGAGAGGTAATGAATGGGTAGAGATTGCTAGCCGG +
Preference number: 1 (lower is better)
Translates to: YPNIHINRKMTRLQW*LILRGNEWVEIASR
Trigger: CCGGCTAGCAATCTCTACCCATTCATTACCTCTCAAGATTAAGCACCATTGAAGCCTTGTCATTTTCCTGTTGATGTGGATATTTGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp TGGGCAGTGGCTGGACTGATGAGGGAACCGCCGCTGCACACCCACGGAGGGCCCTTGGGCGCAGCTTGCTaGGCGAGGGTAGGGGCAAAC +
Preference number: 2 (lower is better)
Translates to: WAVAGLMREPPLHTHGGPLGAAC*ARVGAN
Trigger: GTTTGCCCCTACCCTCGCCCAGCAAGCTGCGCCCAA...GGGCCCTCCGTGGGTGTGCAGCGGCGGTTCCCTCATCAGTCCAGCCACTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR CCA 90 bp GTGGGCTGTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCAACAACGGAACCTCACTaGGGCCTGTCCCGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: VGCEGLQFAPETPDPGPPTTEPH*GLSRLP
Trigger: TGGGAGGCGGGACAGGCCCCAGTGAGGTTCCGTTGT...TGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCACAGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR CCA 90 bp CTGGGGAGGCTGTTGGGGGCTGTTGAGACCTCAGATGGGCTCAGAGCCATGGGCCCCGGAACCTGGGCCTaGCTGAACCCCCTCGAGGCA +
Preference number: 2 (lower is better)
Translates to: LGRLLGAVETSDGLRAMGPGTWA*LNPLEA
Trigger: TGCCTCGAGGGGGTTCAGCCAGGCCCAGGTTCCGGG...GCCCATGGCTCTGAGCCCATCTGAGGTCTCAACAGCCCCCAACAGCCTCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000562146.1
3UTR-3UTR TCA 90 bp GTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCCGGCCAGGCAGGGACTaGGGGAGGGGCCACTTCTCT +
Preference number: 2 (lower is better)
Translates to: VMAAGDASRDTAQRCLAARPGRD*GRGHFS
Trigger: AGAGAAGTGGCCCCTCCCTCAGTCCCTGCCTGGCCG...GGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp GTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCCCTCCAGTTTGCGCCTaGGACCCCAGACCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: VMAAGDASRDTAQRCLAAPPVCA*DPRPRS
Trigger: GGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGG...GGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp CGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCCAGCAGAGCCAGCCTTaGCCTGTCCAGCAGGGACGT +
Preference number: 2 (lower is better)
Translates to: RPLLGDACCLCVAAAAGAQQSQP*PVQQGR
Trigger: ACGTCCCTGCTGGACAGGCCAAGGCTGGCTCTGCTG...GGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR GCA 90 bp CCATCCCCAGCTATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGGAGGGGCCACTTCTCTaGCTCAGAGAGGTGCCCAGG +
Preference number: 2 (lower is better)
Translates to: PSPAMSSHLEGQHQLRGLEGPLL*LREVPR
Trigger: CCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTC...CAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATAGCTGGGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR GCA 90 bp CCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCCTGCAGTGGTGACCTaGTTGGTGACCCCCTCACTG +
Preference number: 2 (lower is better)
Translates to: PPSSGRCLLLVCGSSCWSPAVVT*LVTPSL
Trigger: CAGTGAGGGGGTCACCAAGCAGGTCACCACTGCAGG...GCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp CTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTAGGACAAGCTGGCCCTaGGGTAGGGGTCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LPWNREIGTAHNGTSLGPRTSWP*GRGQGR
Trigger: CCTGCCCTGACCCCTACCCCAGGGCCAGCTTGTCCT...AGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR CCA 90 bp CCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCCAGAGGAGCCCATTTaGCCTCCACAAGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: PPSSGRCLLLVCGSSCWSPEEPI*PPQGAG
Trigger: TCCTGCCCCTTGTGGAGGCCAAATGGGCTCCTCTGG...GCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp CTGGGGAGGCTGTTGGGGGCTGTTGAGACCTCAGATGGGCTCAGAGCCATGGGCGTGTGCCCGCGGTTCTaGGAACGGCTTCACATGAGA +
Preference number: 2 (lower is better)
Translates to: LGRLLGAVETSDGLRAMGVCPRF*ERLHMR
Trigger: TCTCATGTGAAGCCGTTCTCAGAACCGCGGGCACAC...GCCCATGGCTCTGAGCCCATCTGAGGTCTCAACAGCCCCCAACAGCCTCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562146.1
3UTR-3UTR CCA 90 bp TATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGGCTCTGACCCATTGGGCGCAGCTTGCTaGGCGAGGGTAGGGGCAAAC +
Preference number: 2 (lower is better)
Translates to: YEQPPRRTAPAPGSGSDPLGAAC*ARVGAN
Trigger: GTTTGCCCCTACCCTCGCCCAGCAAGCTGCGCCCAA...TGGGTCAGAGCCAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR CCA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATCCCAGGAGGACAAGCTaGCCCTGGGGTAGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHPRRTS*PWGRGQ
Trigger: CTGACCCCTACCCCAGGGCCAGCTTGTCCTCCTGGG...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR CCA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCCCCAGGGTCTGGCCCTaGGGCCCCTGTCTCCATCGT +
Preference number: 2 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCPRVWP*GPCLHR
Trigger: ACGATGGAGACAGGGGCCCCAGGGCCAGACCCTGGG...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 90 bp GTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTaGGCTGCCACCCTCTGTGGGCTGGGTCTTCAGGAATCACCTCTG +
Preference number: 2 (lower is better)
Translates to: VMAAGDASRDTAQRC*AATLCGLGLQESPL
Trigger: CAGAGGTGATTCCTGAAGACCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp GCTCTTGTGGACTATCACGATGGCGTCATCGCCAGCACGGTGACTCCCCTGAAGGGTGGGAGGGAAATGTaGCAGAGGAAGGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: ALVDYHDGVIASTVTPLKGGREM*QRKGPR
Trigger: CCTGGGCCCCTTCCTCTGTCACATTTCCCTCCCACC...CTTCAGGGGAGTCACCGTGCTGGCGATGACGCCATCGTGATAGTCCACAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 90 bp GATGGTCCAGCAGTTTCCAGAGGCAGAATAGAATTTGGGCGCAGCTaGCTGGGCGAGGGTAGGGGCAAACGGGCCCAGGAGAGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: DGPAVSRGRIEFGRS*LGEGRGKRAQEREE
Trigger: CTCTTCCCTCTCCTGGGCCCGTTTGCCCCTACCCTCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCTCTGGAAACTGCTGGACCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR CAA 90 bp AGCCAAGAGCGTGACAGTCCCAAAGGCCTGTGGGATCCTAAGTCTTaGTGGTGGGAGCTGGGTGTCGGTGTGGGGTGGTTTCGGTTGGGG +
Preference number: 2 (lower is better)
Translates to: SQERDSPKGLWDPKS*WWELGVGVGWFRLG
Trigger: CCCCAACCGAAACCACCCCACACCGACACCCAGCTCCCACCACAAAGACTTAGGATCCCACAGGCCTTTGGGACTGTCACGCTCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 90 bp CTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTaGTGTGTGGCAGCAGCTGCTGGAGCCCTTTGCAGAGACCTGGGA +
Preference number: 2 (lower is better)
Translates to: LYQPSFRPLLGDACC*CVAAAAGALCRDLG
Trigger: TCCCAGGTCTCTGCAAAGGGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp GTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCTGGCCTCATCTTCCTTaGAGACCCTTAGTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: VMAAGDASRDTAQRCLAAWPHLP*RPLVLG
Trigger: GCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCA...GGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp CGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCGTCTCCATCGTCCTGTaGTGCAGCTTCACCTTCCAT +
Preference number: 2 (lower is better)
Translates to: RPLLGDACCLCVAAAAGAVSIVL*CSFTFH
Trigger: ATGGAAGGTGAAGCTGCATCACAGGACGATGGAGAC...GGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp CGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCTACACGGGGACCCAATaGTGGCTCTTGTGGACTATC +
Preference number: 2 (lower is better)
Translates to: RPLLGDACCLCVAAAAGAYTGTQ*WLLWTI
Trigger: GATAGTCCACAAGAGCCATCATTGGGTCCCCGTGTA...GGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp GGCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCCCTGCCCATCTACCTaGGGCCTGCAGCGTCAGAGA +
Preference number: 2 (lower is better)
Translates to: GCTQDATELLGGFLSAPHPCPST*GLQRQR
Trigger: TCTCTGACGCTGCAGGCCCCAGGTAGATGGGCAGGG...GTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp GTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTGGACACCATCACTGTGGAAGTGTCCAGCAGGGACGTaGGCTGGAGAACCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: VGWFRLGAAHGWTPSLWKCPAGT*AGEPEG
Trigger: TCCTTCTGGTTCTCCAGCCCACGTCCCTGCTGGACA...CTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp GCATGTCGTGGATGGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCAGCTGGGTGTCGGTGTaGGGTGGTTTCGGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: ACRGWRSRKSQERDSPKGSWVSV*GGFGWG
Trigger: CCCCCAACCGAAACCACCCCACACCGACACCCAGCT...GCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp GCTCTTGTGGACTATCACGATGGCGTCATCGCCAGCACGGTGACTCCCCTGAAGCTTTGTGGTGGGAGCTaGGTGTCGGTGTGGGGTGGT +
Preference number: 2 (lower is better)
Translates to: ALVDYHDGVIASTVTPLKLCGGS*VSVWGG
Trigger: ACCACCCCACACCGACACCCAGCTCCCACCACAAAG...CTTCAGGGGAGTCACCGTGCTGGCGATGACGCCATCGTGATAGTCCACAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp TGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTAGTCCTGGGCAGTGGGTCAGGGCAGGCAGCTaGCCTTGGATGGTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: WRRAMASSSLKTLSPGQWVRAGS*PWMVQQ
Trigger: CTGCTGGACCATCCAAGGTCAGCTGCCTGCCCTGAC...CCACTGCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR GCA 90 bp CCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCCTCACTGGCTTCCTTaGCTTTCTTGTTTCCTGCCT +
Preference number: 2 (lower is better)
Translates to: PPSSGRCLLLVCGSSCWSPHWLP*LSCFLP
Trigger: AGGCAGGAAACAAGAAAGGCAAGGAAGCCAGTGAGG...GCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR GCA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCGCTGCTGGAGCCCTTTaGAGAGACCTGGGACCTCAC +
Preference number: 2 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCAAGAL*RDLGPH
Trigger: GTGAGGTCCCAGGTCTCTGCAAAGGGCTCCAGCAGC...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp TGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGAGGACAAGCTGGCCCTaGGGTAGGGGTCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: WKSLGFLGQDLSQPFCSQRTSWP*GRGQGR
Trigger: CCTGCCCTGACCCCTACCCCAGGGCCAGCTTGTCCT...CTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR CCA 90 bp TGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTAGTCCTGGGCAGTGGACAACGGAACCTCACTaGGGCCTGTCCCGCCTCCCA +
Preference number: 2 (lower is better)
Translates to: WRRAMASSSLKTLSPGQWTTEPH*GLSRLP
Trigger: TGGGAGGCGGGACAGGCCCCAGTGAGGTTCCGTTGT...CCACTGCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR CCA 90 bp CCATCCCCAGCTATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGGTGGCTCATCTGCCCTaGAATCGAGAGATAGGCACA +
Preference number: 2 (lower is better)
Translates to: PSPAMSSHLEGQHQLRGLVAHLP*NREIGT
Trigger: TGTGCCTATCTCTCGATTCCAGGGCAGATGAGCCAC...CAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATAGCTGGGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp GGCAGAGTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGTGTGGTGAAGCCACCTaGAGAAGGGCAATGGCCTCA +
Preference number: 2 (lower is better)
Translates to: GRVMAAGDASRDTAQRCLCGEAT*RRAMAS
Trigger: TGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA...CAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCACTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp GCATGTCGTGGATGGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCTGGGGTGGTTTCGGTTaGGGGCAGCACATGGCTGGA +
Preference number: 2 (lower is better)
Translates to: ACRGWRSRKSQERDSPKGWGGFG*GQHMAG
Trigger: TCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCA...GCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 90 bp AGGGTACAAACAACCCGTCTCTCCCACCTGAGGGCGGGCGTCACTTaGAGGTGCGTTCTACTCTGTGTCTCAGAGTCACCAGTGGGACTG +
Preference number: 2 (lower is better)
Translates to: RVQTTRLSHLRAGVT*RCVLLCVSESPVGL
Trigger: CAGTCCCACTGGTGACTCTGAGACACAGAGTAGAACGCACCTCAAAGTGACGCCCGCCCTCAGGTGGGAGAGACGGGTTGTTTGTACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 90 bp TACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTaGCTTGTGTGTGGCAGCAGCTGCTGGAGCCCTTTGCAGAGACCT +
Preference number: 2 (lower is better)
Translates to: YSVSTLLPPSSGRCL*LVCGSSCWSPLQRP
Trigger: AGGTCTCTGCAAAGGGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp CAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCACTCTATGTGTGTGTTATaGGTCACGTGTGCATCTCTG +
Preference number: 2 (lower is better)
Translates to: QGLREGPLLCLREVPRQHSMCVL*VTCASL
Trigger: CAGAGATGCACACGTGACTCATAACACACACATAGA...GTGCTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp CTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTGGGCCTAGTGGGCTGTaGGGGCCTCCAGTTTGCGCC +
Preference number: 2 (lower is better)
Translates to: LQESPLLPAWSLMEIAGVGPSGL*GPPVCA
Trigger: GGCGCAAACTGGAGGCCCTCACAGCCCACTAGGCCC...AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR GCA 90 bp CCCTTAGTCCTGGGCAGTGGCTGGACTGATGAGGGAACCGCCGCTGCACACCCAGTTATGAGTCACGTGTaGATCTCTGTGTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: PLVLGSGWTDEGTAAAHPVMSHV*ISVCVC
Trigger: GCACACACACACAGAGATGCACACGTGACTCATAAC...TGGGTGTGCAGCGGCGGTTCCCTCATCAGTCCAGCCACTGCCCAGGACTAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp CAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCCCTCCCCCAGATGCGTGCAGGCCACAGTaGTCGGCCAGGCAGGGACTG +
Preference number: 2 (lower is better)
Translates to: QYTTKVVRTACKQVPPPDACRPQ*SARQGL
Trigger: CAGTCCCTGCCTGGCCGACCACTGTGGCCTGCACGC...ATCTGGGGGAGGGACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp CTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCGTTAGTGGGCTCTATTaGAGTTCTGGTGGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: LLPPSSGRCLLLVCGSSCVSGLY*SSGGRE
Trigger: TTCCCTCCCACCAGAACTCCAATAGAGCCCACTAAC...GCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp GGTGTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTGGACACCATCACTGTGGAATTCCTGCAGAGGGTaGGACAACAGCTCATTTCAG +
Preference number: 2 (lower is better)
Translates to: GVGWFRLGAAHGWTPSLWNSCRG*DNSSFQ
Trigger: CTGAAATGAGCTGTTGTCTCACCCTCTGCAGGAATT...CCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp GCATGTCGTGGATGGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCCTGACTTGTTCACTTTaGGCAGTGGCAGCAGCGAGC +
Preference number: 2 (lower is better)
Translates to: ACRGWRSRKSQERDSPKGLTCSL*AVAAAS
Trigger: GCTCGCTGCTGCCACTGCTCAAAGTGAACAAGTCAG...GCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR GCA 90 bp GTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCGTGCACGCCTTTGTGTaGCTAAAGAATGTGGTTCAG +
Preference number: 2 (lower is better)
Translates to: VMAAGDASRDTAQRCLAAVHAFV*LKNVVQ
Trigger: CTGAACCACATTCTTTAGGCACACAAAGGCGTGCAC...GGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR GCA 90 bp TGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGAATTTGGGCGCAGCTTaGTGGGCGAGGGTAGGGGCA +
Preference number: 2 (lower is better)
Translates to: WKSLGFLGQDLSQPFCSQNLGAA*WARVGA
Trigger: TGCCCCTACCCTCGCCCAGCAAGCTGCGCCCAAATT...CTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR GCA 90 bp GTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCCCTTCATTTTGTCTCTaGAAACACCCACGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: VMAAGDASRDTAQRCLAAPSFCL*KHPRGQ
Trigger: TTGCCCACGTGGGTGTTTGCAGAGACAAAATGAAGG...GGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp GCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCGCAGCTGACCTTGGATaGTCCAGCAGTTTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: AARRMLQNFWVDSFQLRTAADLG*SSSFQR
Trigger: CCTCTGGAAACTGCTGGACCATCCAAGGTCAGCTGC...GGTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536005.7
3UTR-3UTR CCA 90 bp GGCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCCCCCACCTTGTAAGTaGCAGGGTGGTGATGTTGTG +
Preference number: 2 (lower is better)
Translates to: GCTQDATELLGGFLSAPHPPPCK*QGGDVV
Trigger: CACAACATCACCACCCTGCCACTTACAAGGTGGGGG...GTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp TCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGGCTGACTGTGGTGAAGCCACCTaGAGAAGGGCAATGGCCTCA +
Preference number: 2 (lower is better)
Translates to: SLGFLGQDLSQPFCSQADCGEAT*RRAMAS
Trigger: TGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA...GTCAGCCTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp GTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCCCTCTGTTACCTGCGTaGTCTTTGATGGAAATCGCT +
Preference number: 2 (lower is better)
Translates to: VMAAGDASRDTAQRCLAAPLLPA*SLMEIA
Trigger: AGCGATTTCCATCAAAGACCACGCAGGTAACAGAGG...GGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGGGTGTCGGTGTGGGGTaGTTTCGGTTGGGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQGVGVG*FRLGAA
Trigger: TGCTGCCCCCAACCGAAACCACCCCACACCGACACC...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCCCCTTTGCAGAGACCTaGGACCTCACCACACCCATA +
Preference number: 2 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCPFAET*DLTTPI
Trigger: TATGGGTGTGGTGAGGTCCCAGGTCTCTGCAAAGGG...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp AACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCTACACGGCCAGGCAGGGACTaGGGGAGGGGCCACTTCTCT +
Preference number: 2 (lower is better)
Translates to: NFWVDSFQLRTRRNAISTRPGRD*GRGHFS
Trigger: AGAGAAGTGGCCCCTCCCTCAGTCCCTGCCTGGCCG...TGTAGAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp AACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCTACATCCGGGGTCTGGCTCTaGCCCATTCGCGTGCAGGCC +
Preference number: 2 (lower is better)
Translates to: NFWVDSFQLRTRRNAISTSGVWL*PIRVQA
Trigger: GGCCTGCACGCGAATGGGTCAGAGCCAGACCCCGGA...TGTAGAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp CACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGCTGGGTCTTCAGGAATCTACCTGCGTGGTCTTTaGTGGAAATCGCTGGGGTTT +
Preference number: 2 (lower is better)
Translates to: HCSEMLGCHPLWAGSSGIYLRGL*WKSLGF
Trigger: AAACCCCAGCGATTTCCATCAAAGACCACGCAGGTA...GATTCCTGAAGACCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp GCTCTTGTGGACTATCACGATGGCGTCATCGCCAGCACGGTGACTCCCCTGAAGGGTGAGAGGATCGCTTaGGACCAGGAGTTTCAACTA +
Preference number: 2 (lower is better)
Translates to: ALVDYHDGVIASTVTPLKGERIA*DQEFQL
Trigger: TAGTTGAAACTCCTGGTCTCAAGCGATCCTCTCACC...CTTCAGGGGAGTCACCGTGCTGGCGATGACGCCATCGTGATAGTCCACAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR GCA 90 bp CCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCGTCTGCAATTATGAGTaGTGGTGGGTATTGTGTTTC +
Preference number: 2 (lower is better)
Translates to: PPSSGRCLLLVCGSSCWSVCNYE*WWVLCF
Trigger: GAAACACAATACCCACCAGCACTCATAATTGCAGAC...GCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp CAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCACATATTCACACATATGTaGAGCACGTCTAGATCTGTG +
Preference number: 2 (lower is better)
Translates to: QGLREGPLLCLREVPRQHIFTHM*STSRSV
Trigger: CACAGATCTAGACGTGCTCCACATATGTGTGAATAT...GTGCTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp TGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTAGTCCTGGGCAGTGGCCCCCACCTTGTAAGTaGCAGGGTGGTGATGTTGTG +
Preference number: 2 (lower is better)
Translates to: WRRAMASSSLKTLSPGQWPPPCK*QGGDVV
Trigger: CACAACATCACCACCCTGCCACTTACAAGGTGGGGG...CCACTGCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp TTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCCTGCCCATCTACCTaGGGCCTGCAGCGTCAGAGA +
Preference number: 2 (lower is better)
Translates to: LMEIAGVSWSRSEPAFLQPCPST*GLQRQR
Trigger: TCTCTGACGCTGCAGGCCCCAGGTAGATGGGCAGGG...CTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp GTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCGCAAGGTGGTATTTATaGGGAGCATATCCCCTTCAT +
Preference number: 2 (lower is better)
Translates to: VMAAGDASRDTAQRCLAAARWYL*GAYPLH
Trigger: ATGAAGGGGATATGCTCCCCATAAATACCACCTTGC...GGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp GGCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACACAACGGAACCTCACTaGGGCCTGTATGTGCGCATA +
Preference number: 2 (lower is better)
Translates to: GCTQDATELLGGFLSAPHTTEPH*GLYVRI
Trigger: TATGCGCACATACAGGCCCCAGTGAGGTTCCGTTGT...GTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562849.6
3UTR-3UTR CCA 90 bp CGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCTGGACACCATCACTGTaGAAGTTTCTGCATTCATTC +
Preference number: 2 (lower is better)
Translates to: RPLLGDACCLCVAAAAGAWTPSL*KFLHSF
Trigger: GAATGAATGCAGAAACTTCCACAGTGATGGTGTCCA...GGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCAGGGCATGTCGTGGATaGAGGAGCAGGAAAAGCCAA +
Preference number: 2 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCRACRG*RSRKSQ
Trigger: TTGGCTTTTCCTGCTCCTCCATCCACGACATGCCCT...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp GGTGTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTGGACACCATCACTGTGGACTCCTGTAAGGCACTaGCTATCCAAATATCCACAT +
Preference number: 2 (lower is better)
Translates to: GVGWFRLGAAHGWTPSLWTPVRH*LSKYPH
Trigger: ATGTGGATATTTGGATAGTCAGTGCCTTACAGGAGT...CCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp CTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTTTTGTCTGCAATTATaGGTGCTGGTGGGTATTGTG +
Preference number: 2 (lower is better)
Translates to: LLPPSSGRCLLLVCGSSCFCLQL*VLVGIV
Trigger: CACAATACCCACCAGCACTCATAATTGCAGACAAAA...GCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp ACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGTGGGCTTGGCCAGTGTaGCAATGGATGTTCCTCGTG +
Preference number: 2 (lower is better)
Translates to: TSSDDEAYCLSTAHAKSLWAWPV*QWMFLV
Trigger: CACGAGGAACATCCATTGTCACACTGGCCAAGCCCA...CAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR GCA 90 bp GGTGTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTGGACACCATCACTGTGGATTCGAATTTTGGATTaGACCCCACTTTCAAGGCAC +
Preference number: 2 (lower is better)
Translates to: GVGWFRLGAAHGWTPSLWIRILD*TPLSRH
Trigger: GTGCCTTGAAAGTGGGGTGCAATCCAAAATTCGAAT...CCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR GCA 90 bp GCATGTCGTGGATGGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCGTGGCACCAGAGCCATaGCTAGTGATGTTCAGAACA +
Preference number: 2 (lower is better)
Translates to: ACRGWRSRKSQERDSPKGVAPEP*LVMFRT
Trigger: TGTTCTGAACATCACTAGGCATGGCTCTGGTGCCAC...GCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGGGGGCAGCACATGGCTaGACACCATCACTGTGGAAG +
Preference number: 2 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQGAAHG*TPSLWK
Trigger: CTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCCC...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 90 bp TGTGGGCTGGGTCTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTaGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: CGLGLQESPLLPAWS*MEIAGVSWSRSEPA
Trigger: GGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAGACCCAGCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp TTGCCTAGAAAACAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCTCCGGGGTCTGGCTCTaGCCCATTCGCGTGCAGGCC +
Preference number: 2 (lower is better)
Translates to: LPRKQYTTKVVRTACKQVSGVWL*PIRVQA
Trigger: GGCCTGCACGCGAATGGGTCAGAGCCAGACCCCGGA...GACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTGTTTTCTAGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp CATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGAGGTGGAGATGGCCCATCCTCATaGCGTTACACCAGCCATGTC +
Preference number: 2 (lower is better)
Translates to: HGWTPSLWKFLHSFPGGGDGPSS*RYTSHV
Trigger: GACATGGCTGGTGTAACGTCATGAGGATGGGCCATC...TCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp ACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGATGGATAGGAACAGCTaGGTGGGAGTGTCAGTGGCA +
Preference number: 2 (lower is better)
Translates to: TSSDDEAYCLSTAHAKSLMDRNS*VGVSVA
Trigger: TGCCACTGACACTCCCACTCAGCTGTTCCTATCCAT...CAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR GCA 90 bp GCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCGTGCACGCCTTTGTGTaGCTAAAGAATGTGGTTCAG +
Preference number: 2 (lower is better)
Translates to: AARRMLQNFWVDSFQLRTVHAFV*LKNVVQ
Trigger: CTGAACCACATTCTTTAGGCACACAAAGGCGTGCAC...GGTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR GCA 90 bp TCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGGCTGACCCTTCATTTTGTCTCTaGAAACACCCACGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: SLGFLGQDLSQPFCSQADPSFCL*KHPRGQ
Trigger: TTGCCCACGTGGGTGTTTGCAGAGACAAAATGAAGG...GTCAGCCTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGCTGCAAACACCCACGTaGGCAAGGCCAGAACACAGC +
Preference number: 2 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKLQTPT*ARPEHS
Trigger: GCTGTGTTCTGGCCTTGCCCACGTGGGTGTTTGCAG...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp GGTGTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTGGACACCATCACTGTGGTGCAATTATGAGTGCTaGTGGGTATTGTGTTTCAAG +
Preference number: 2 (lower is better)
Translates to: GVGWFRLGAAHGWTPSLWCNYEC*WVLCFK
Trigger: CTTGAAACACAATACCCACCAGCACTCATAATTGCA...CCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCACACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 90 bp TTGTGGTGGCAAGGTGGTATTTATGGGGAGCATATCCCCTTCATTTaGTCTCTGCAAACACCCACGTGGGCAAGGCCAGAACACAGCCAC +
Preference number: 2 (lower is better)
Translates to: LWWQGGIYGEHIPFI*SLQTPTWARPEHSH
Trigger: GTGGCTGTGTTCTGGCCTTGCCCACGTGGGTGTTTGCAGAGACAAAATGAAGGGGATATGCTCCCCATAAATACCACCTTGCCACCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCCATGTCTCAGAGAAATaGTGCCAAGTTTCAGTGAGG +
Preference number: 2 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCHVSEK*CQVSVR
Trigger: CCTCACTGAAACTTGGCATCATTTCTCTGAGACATG...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR GCA 90 bp AACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCTACATCAGAGATGCTTGGCTaGCACCCTCTGTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: NFWVDSFQLRTRRNAISTSEMLG*HPLWAG
Trigger: CCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGA...TGTAGAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp CTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTCTGCAAACACCCACGTaGGCAAGGCCAGAACACAGC +
Preference number: 2 (lower is better)
Translates to: LLPAWSLMEIAGVSWSRSLQTPT*ARPEHS
Trigger: GCTGTGTTCTGGCCTTGCCCACGTGGGTGTTTGCAG...AGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGGATCCTAAGTCTTTGTaGTGGGAGCTGGGTGTCGGT +
Preference number: 2 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQDPKSL*WELGVG
Trigger: ACCGACACCCAGCTCCCACCACAAAGACTTAGGATC...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR GCA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTGTTATGAGTCACGTGTaGATCTCTGTGTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: CGEATWRRAMASSSLKTLVMSHV*ISVCVC
Trigger: GCACACACACACAGAGATGCACACGTGACTCATAAC...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp CACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGCTGGGTCTTCAGGAATCATATTCACACATATGTaGAGCACGTCTAGATCTGTG +
Preference number: 2 (lower is better)
Translates to: HCSEMLGCHPLWAGSSGIIFTHM*STSRSV
Trigger: CACAGATCTAGACGTGCTCCACATATGTGTGAATAT...GATTCCTGAAGACCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp TTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGAGGCAGAATAGAATTTaGGCGCAGCTTGCTGGGCGA +
Preference number: 2 (lower is better)
Translates to: LMEIAGVSWSRSEPAFLQRQNRI*AQLAGR
Trigger: TCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCT...CTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR CCA 90 bp TGGATAGGAACAGCTGAGTGGGAGTGTCAGTGGCACTGGAGTATGCAACACCAACTTTCCTCTCTTTCCTaGTGGTACAAGCCATCAGGG +
Preference number: 2 (lower is better)
Translates to: WIGTAEWECQWHWSMQHQLSSLS*WYKPSG
Trigger: CCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAG...TTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp TGGATAGGAACAGCTGAGTGGGAGTGTCAGTGGCACTGGAGTATGCAACACCAACAAGCCATGGTGTTGTaGAGGGCATGGAAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: WIGTAEWECQWHWSMQHQQAMVL*RAWKGR
Trigger: TCTTCCTTTCCATGCCCTCCACAACACCATGGCTTG...TTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTTCTATGTGTGTGTTATaGGTCACGTGTGCATCTCTG +
Preference number: 2 (lower is better)
Translates to: CGEATWRRAMASSSLKTLSMCVL*VTCASL
Trigger: CAGAGATGCACACGTGACTCATAACACACACATAGA...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp TTGCCTAGAAAACAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCCTAGCACCACCTGACTaGGGGACTGAGGGTACTGGG +
Preference number: 2 (lower is better)
Translates to: LPRKQYTTKVVRTACKQVLAPPD*GTEGTG
Trigger: CCCAGTACCCTCAGTCCCTCAGTCAGGTGGTGCTAG...GACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTGTTTTCTAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp AACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCTACATGGCCTCATCTTCCTTaGAGACCCTTAGTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: NFWVDSFQLRTRRNAISTWPHLP*RPLVLG
Trigger: GCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCA...TGTAGAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR GCA 90 bp ACTTCCTACTTCGCCTCTCTCTCCGAAGCGCTCTCTACAGAGGCACAACAAACAGTGCACGCCTTTGTGTaGCTAAAGAATGTGGTTCAG +
Preference number: 2 (lower is better)
Translates to: TSYFASLSEALSTEAQQTVHAFV*LKNVVQ
Trigger: CTGAACCACATTCTTTAGGCACACAAAGGCGTGCAC...TGTTTGTTGTGCCTCTGTAGAGAGCGCTTCGGAGAGAGAGGCGAAGTAGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR CCA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCGGACTATTCGAATTTTaGATTGCACCCCACTTTCAA +
Preference number: 2 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCGLFEF*IAPHFQ
Trigger: TTGAAAGTGGGGTGCAATCCAAAATTCGAATAGTCC...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp CAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGGCTATACCTCCAGTTTGCGCCTaGGACCCCAGACCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: QDVFLKRVSFLDCILKAIPPVCA*DPRPRS
Trigger: GGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGG...TATAGCCTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp CAGAAGCAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGCAGGCAGCACTGTGGTaGAGCCACCTGGAGAAGGGC +
Preference number: 2 (lower is better)
Translates to: QKQDVFLKRVSFLDCILKQAALW*SHLEKG
Trigger: GCCCTTCTCCAGGTGGCTTCACCACAGTGCTGCCTG...CTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp CATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGAGGTGGAAGCCCAGGGTTAAAATaGCGGGTTTTGTCTGCAATT +
Preference number: 2 (lower is better)
Translates to: HGWTPSLWKFLHSFPGGGSPGLK*RVLSAI
Trigger: AATTGCAGACAAAACCCGTCATTTTAACCCTGGGCT...TCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR GCA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGCCTTCATTTTGTCTCTaGAAACACCCACGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKPSFCL*KHPRGQ
Trigger: TTGCCCACGTGGGTGTTTGCAGAGACAAAATGAAGG...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR GCA 90 bp GCATGTCGTGGATGGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCACAAGGCTTCAATGGTaGTTAATCTTGAGAGGTAAT +
Preference number: 2 (lower is better)
Translates to: ACRGWRSRKSQERDSPKGTRLQW*LILRGN
Trigger: ATTACCTCTCAAGATTAAGCACCATTGAAGCCTTGT...GCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR GCA 90 bp TGGATAGGAACAGCTGAGTGGGAGTGTCAGTGGCACTGGAGTATGCAACACCAAATGACGGGTTTTGTCTaGAATTATGAGTGCTGGTGG +
Preference number: 2 (lower is better)
Translates to: WIGTAEWECQWHWSMQHQMTGFV*NYECWW
Trigger: CCACCAGCACTCATAATTGCAGACAAAACCCGTCAT...TTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp AGAAAACAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCCCTCCCAGGGTGGTGATGTTGTaGCTCATCTGCCCTGGAATC +
Preference number: 2 (lower is better)
Translates to: RKQYTTKVVRTACKQVPPRVVML*LICPGI
Trigger: GATTCCAGGGCAGATGAGCCACAACATCACCACCCT...GGGAGGGACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp TGGATAGGAACAGCTGAGTGGGAGTGTCAGTGGCACTGGAGTATGCAACACCAATTGAGAGGTAATGAATaGGTAGAGATTGCTAGCCGG +
Preference number: 2 (lower is better)
Translates to: WIGTAEWECQWHWSMQHQLRGNE*VEIASR
Trigger: CCGGCTAGCAATCTCTACCCATTCATTACCTCTCAA...TTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp CTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTATGTGTGTGTTATaGGTCACGTGTGCATCTCTG +
Preference number: 2 (lower is better)
Translates to: LQESPLLPAWSLMEIAGVSMCVL*VTCASL
Trigger: CAGAGATGCACACGTGACTCATAACACACACATAGA...AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGTCCAAAAATGTCTGCTaGGCATCAGGGTACAAACAA +
Preference number: 2 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQSKNVC*ASGYKQ
Trigger: TTGTTTGTACCCTGATGCTCAGCAGACATTTTTGGA...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR GCA 90 bp CAGAAGCAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGAATTTGGGCGCAGCTTaGTGGGCGAGGGTAGGGGCA +
Preference number: 2 (lower is better)
Translates to: QKQDVFLKRVSFLDCILKNLGAA*WARVGA
Trigger: TGCCCCTACCCTCGCCCAGCAAGCTGCGCCCAAATT...CTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTGCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536005.7
3UTR-3UTR CCA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTATATTCACACATATGTaGAGCACGTCTAGATCTGTG +
Preference number: 2 (lower is better)
Translates to: CGEATWRRAMASSSLKTLIFTHM*STSRSV
Trigger: CACAGATCTAGACGTGCTCCACATATGTGTGAATAT...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGGCAAGGTGGTATTTATaGGGAGCATATCCCCTTCAT +
Preference number: 2 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKARWYL*GAYPLH
Trigger: ATGAAGGGGATATGCTCCCCATAAATACCACCTTGC...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp GGGCAGCACATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGAATTATGAGTGCTGGTaGGTATTGTGTTTCAAGGTG +
Preference number: 2 (lower is better)
Translates to: GQHMAGHHHCGSFCIHSQNYECW*VLCFKV
Trigger: CACCTTGAAACACAATACCCACCAGCACTCATAATT...CTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp CATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGAGGTGGAATGACAAGGCTTCAATaGTGCTTAATCTTGAGAGGT +
Preference number: 2 (lower is better)
Translates to: HGWTPSLWKFLHSFPGGGMTRLQ*CLILRG
Trigger: ACCTCTCAAGATTAAGCACCATTGAAGCCTTGTCAT...TCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR TCA 90 bp CAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGGCTATACTGTGGCAGCAAGGCTaGGTAGCCTTCTGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: QDVFLKRVSFLDCILKAILWQQG*VAFWSS
Trigger: AGAGGACCAGAAGGCTACTCAGCCTTGCTGCCACAG...TATAGCCTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR GCA 90 bp AGAAAGAGATTACTAAATAGTCTTAGCCCTTCATTGGAGGAACAGAAATGTGGGCATCTACCTGGGGCCTaGAGCGTCAGAGATAGCTCT +
Preference number: 2 (lower is better)
Translates to: RKRLLNSLSPSLEEQKCGHLPGA*SVRDSS
Trigger: AGAGCTATCTCTGACGCTGCAGGCCCCAGGTAGATG...CCCACATTTCTGTTCCTCCAATGAAGGGCTAAGACTATTTAGTAATCTCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR TCA 90 bp CAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGGCTATAGAGCTCCACGTTCCGTaGAACCTTTGCAGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: QDVFLKRVSFLDCILKAIELHVP*NLCRWV
Trigger: AACCCACCTGCAAAGGTTTCACGGAACGTGGAGCTC...TATAGCCTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536005.7
3UTR-3UTR CCA 90 bp CAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGGCTATACCCCCACCTTGTAAGTaGCAGGGTGGTGATGTTGTG +
Preference number: 2 (lower is better)
Translates to: QDVFLKRVSFLDCILKAIPPPCK*QGGDVV
Trigger: CACAACATCACCACCCTGCCACTTACAAGGTGGGGG...TATAGCCTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp TTGCCTAGAAAACAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCATGCTACAGAACTTCTaGGTGGATTCCTTTCAGCTC +
Preference number: 2 (lower is better)
Translates to: LPRKQYTTKVVRTACKQVMLQNF*VDSFQL
Trigger: GAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCAT...GACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTGTTTTCTAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR CAA 90 bp ATCCACATCAACAGGAAAATGACAAGGCTTCAATGGTGCTTAATCTaGAGAGGTAATGAATGGGTAGAGATTGCTAGCCGGAGGTGTATT +
Preference number: 2 (lower is better)
Translates to: IHINRKMTRLQWCLI*RGNEWVEIASRRCI
Trigger: AATACACCTCCGGCTAGCAATCTCTACCCATTCATTACCTCTCAAGATTAAGCACCATTGAAGCCTTGTCATTTTCCTGTTGATGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CCA 90 bp CTCATTCCTGGACTGCATTTTAAAGGCTATACAGTACAACAGACAGATATTTTTTACAGAACTTCTGGGTaGATTCCTTTCAGCTCCGCA +
Preference number: 2 (lower is better)
Translates to: LIPGLHFKGYTVQQTDIFYRTSG*IPFSSA
Trigger: TGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTA...AAAAATATCTGTCTGTTGTACTGTATAGCCTTTAAAATGCAGTCCAGGAATGAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CCA 90 bp CTCATTCCTGGACTGCATTTTAAAGGCTATACAGTACAACAGACAGATATTTTTGCAAGGTGGTATTTATaGGGAGCATATCCCCTTCAT +
Preference number: 2 (lower is better)
Translates to: LIPGLHFKGYTVQQTDIFARWYL*GAYPLH
Trigger: ATGAAGGGGATATGCTCCCCATAAATACCACCTTGC...AAAAATATCTGTCTGTTGTACTGTATAGCCTTTAAAATGCAGTCCAGGAATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR TCA 72 bp GGACCTTGCTGTGGTCCCCCGGAACCTGGGCCTGGCTaGACCCCCTCGAGGCAGCTGCAGGGCTTCACCAGC +
Preference number: 3 (lower is better)
Translates to: GPCCGPPEPGPG*TPSRQLQGFTS
Trigger: GCTGGTGAAGCCCTGCAGCTGCCTCGAGGGGGTTCAGCCAGGCCCAGGTTCCGGGGGACCACAGCAAGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000562146.1
3UTR TCA 72 bp TCGCGTGCAGGCCACAGTGGTCGGCCAGGCAGGGACTaGGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: SRAGHSGRPGRD*GRGHFSASERC
Trigger: GCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTGCCTGGCCGACCACTGTGGCCTGCACGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR GCA 72 bp GGCTCAGAGCCATGGGCAGAGATCTCTGGCCAGCAGTaGCCTCTGCCAGGGCCGTCTCGGACCCCACCCCTT +
Preference number: 3 (lower is better)
Translates to: GSEPWAEISGQQ*PLPGPSRTPPL
Trigger: AAGGGGTGGGGTCCGAGACGGCCCTGGCAGAGGGCACTGCTGGCCAGAGATCTCTGCCCATGGCTCTGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562146.1
3UTR CCA 72 bp GGGTCTGGCTCTGACCCATTCGCGTGCAGGCCACAGTaGTCGGCCAGGCAGGGACTGAGGGAGGGGCCACTT +
Preference number: 3 (lower is better)
Translates to: GSGSDPFACRPQ*SARQGLREGPL
Trigger: AAGTGGCCCCTCCCTCAGTCCCTGCCTGGCCGACCACTGTGGCCTGCACGCGAATGGGTCAGAGCCAGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR GCA 72 bp CGGAACCTGGGCCTGGCTGAACCCCCTCGAGGCAGCTaGAGGGCTTCACCAGCCTTTTCTCTGAGCTGTGCC +
Preference number: 3 (lower is better)
Translates to: RNLGLAEPPRGS*RASPAFSLSCA
Trigger: GGCACAGCTCAGAGAAAAGGCTGGTGAAGCCCTGCAGCTGCCTCGAGGGGGTTCAGCCAGGCCCAGGTTCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562146.1
3UTR TCA 72 bp GGGTCTGGCCCTGGGGCCCCTGTCTCCATCGTCCTGTaGTGCAGCTTCACCTTCCATCTCCTTGGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: GSGPGAPVSIVL*CSFTFHLLGPL
Trigger: CAGAGGCCCAAGGAGATGGAAGGTGAAGCTGCATCACAGGACGATGGAGACAGGGGCCCCAGGGCCAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 72 bp GCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATaGTTGGCTGCCACCCTCTGTGGGCTGGGTCTTCAG +
Preference number: 3 (lower is better)
Translates to: AAGDASRDTAQR*LAATLCGLGLQ
Trigger: CTGAAGACCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR GCA 72 bp GTCTCAGAGTCACCAGTGGGACTGCGCTCAGTGGCCTaGAGTGGTGACCTGCTTGGTGACCCCCTCACTGGC +
Preference number: 3 (lower is better)
Translates to: VSESPVGLRSVA*SGDLLGDPLTG
Trigger: GCCAGTGAGGGGGTCACCAAGCAGGTCACCACTGCAGGCCACTGAGCGCAGTCCCACTGGTGACTCTGAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp GGTGGGAGCTGGGTGTCGGTGTGGGGTGGTTTCGGTTaGGGGCAGCACATGGCTGGACACCATCACTGTGGA +
Preference number: 3 (lower is better)
Translates to: GGSWVSVWGGFG*GQHMAGHHHCG
Trigger: TCCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCACACCGACACCCAGCTCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp GGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGGGCAGGCAGCTGACCTaGGATGGTCCAGCAGTTTCC +
Preference number: 3 (lower is better)
Translates to: GDASRDTAQRCLAATLCGGRQLT*DGPAVS
Trigger: GGAAACTGCTGGACCATCCAAGGTCAGCTGCCTGCC...CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR CAA 90 bp GGCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCTGAGGGTACTGGGGTaGGGAGGGGGCCTAGTGGGC +
Preference number: 3 (lower is better)
Translates to: GCTQDATELLGGFLSAPHLRVLG*GGGLVG
Trigger: GCCCACTAGGCCCCCTCCCAACCCCAGTACCCTCAG...GTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR GCA 72 bp CAGTGGGACTGCGCTCAGTGGCCTGCAGTGGTGACCTaGTTGGTGACCCCCTCACTGGCTTCCTTGCCTTTC +
Preference number: 3 (lower is better)
Translates to: QWDCAQWPAVVT*LVTPSLASLPF
Trigger: GAAAGGCAAGGAAGCCAGTGAGGGGGTCACCAAGCAGGTCACCACTGCAGGCCACTGAGCGCAGTCCCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCGTGGGGTGGTTTCGGTaGGGGGCAGCACATGGCTGG +
Preference number: 3 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCVGWFR*GAAHGW
Trigger: CCAGCCATGTGCTGCCCCCAACCGAAACCACCCCAC...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp CGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCTGGGATCCTAAGTCTTaGTGGTGGGAGCTGGGTGTC +
Preference number: 3 (lower is better)
Translates to: RPLLGDACCLCVAAAAGAWDPKS*WWELGV
Trigger: GACACCCAGCTCCCACCACAAAGACTTAGGATCCCA...GGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 72 bp TCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTaGTGGAGCCCTTTGCAGAGACCTGGGACCTCACCA +
Preference number: 3 (lower is better)
Translates to: SGRCLLLVCGSS*WSPLQRPGTSP
Trigger: TGGTGAGGTCCCAGGTCTCTGCAAAGGGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp AAGGCCTGTGGGATCCTAAGTCTTTGTGGTGGGAGCTaGGTGTCGGTGTGGGGTGGTTTCGGTTGGGGGCAG +
Preference number: 3 (lower is better)
Translates to: KACGILSLCGGS*VSVWGGFGWGQ
Trigger: CTGCCCCCAACCGAAACCACCCCACACCGACACCCAGCTCCCACCACAAAGACTTAGGATCCCACAGGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp TCTGTGTCTCAGAGTCACCAGTGGGACTGCGCTCAGTaGCCTGCAGTGGTGACCTGCTTGGTGACCCCCTCA +
Preference number: 3 (lower is better)
Translates to: SVSQSHQWDCAQ*PAVVTCLVTPS
Trigger: TGAGGGGGTCACCAAGCAGGTCACCACTGCAGGCCACTGAGCGCAGTCCCACTGGTGACTCTGAGACACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp CTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCCACCCTCCTTCAGGATaGCACCCCACTTTCAAGGCA +
Preference number: 3 (lower is better)
Translates to: LLPPSSGRCLLLVCGSSCHPPSG*HPTFKA
Trigger: TGCCTTGAAAGTGGGGTGCAATCCTGAAGGAGGGTG...GCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR TCA 72 bp TCTCTGCCTCAGAGAGGTGCCCAGGCAGCACTGTGGTaGAGCCACCTGGAGAAGGGCAATGGCCTCATCTTC +
Preference number: 3 (lower is better)
Translates to: SLPQRGAQAALW*SHLEKGNGLIF
Trigger: GAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACAGTGCTGCCTGGGCACCTCTCTGAGGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR GCA 72 bp GCGTTCTACTCTGTGTCTCAGAGTCACCAGTGGGACTaGGCTCAGTGGCCTGCAGTGGTGACCTGCTTGGTG +
Preference number: 3 (lower is better)
Translates to: AFYSVSQSHQWD*AQWPAVVTCLV
Trigger: CACCAAGCAGGTCACCACTGCAGGCCACTGAGCGCAGTCCCACTGGTGACTCTGAGACACAGAGTAGAACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 72 bp CGTCTCTCCCACCTGAGGGCGGGCGTCACTTTGAGGTaGGTTCTACTCTGTGTCTCAGAGTCACCAGTGGGA +
Preference number: 3 (lower is better)
Translates to: RLSHLRAGVTLR*VLLCVSESPVG
Trigger: TCCCACTGGTGACTCTGAGACACAGAGTAGAACGCACCTCAAAGTGACGCCCGCCCTCAGGTGGGAGAGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp CTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTaGCTGCCACCCTCTGTGGGCTGGGTCTTCAGGAAT +
Preference number: 3 (lower is better)
Translates to: LAMLAGTLLRDA*LPPSVGWVFRN
Trigger: ATTCCTGAAGACCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 72 bp GGCTTCACCAGCCTTTTCTCTGAGCTGTGCCTGCTGTaGGTCCTAGCGAGTTTCTCTGTGCCCGGCTCAAGC +
Preference number: 3 (lower is better)
Translates to: GFTSLFSELCLL*VLASFSVPGSS
Trigger: GCTTGAGCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTCAGAGAAAAGGCTGGTGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562146.1
3UTR CCA 72 bp CGGGGACCCAATGATGGCTCTTGTGGACTATCACGATaGCGTCATCGCCAGCACGGTGACTCCCCTGAAGAC +
Preference number: 3 (lower is better)
Translates to: RGPNDGSCGLSR*RHRQHGDSPED
Trigger: GTCTTCAGGGGAGTCACCGTGCTGGCGATGACGCCATCGTGATAGTCCACAAGAGCCATCATTGGGTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp CCGCTCATGCCAAGAGCCTGGACATGCAGGTGGGCATaGATAGGAACAGCTGAGTGGGAGTGTCAGTGGCAC +
Preference number: 3 (lower is better)
Translates to: PLMPRAWTCRWA*IGTAEWECQWH
Trigger: GTGCCACTGACACTCCCACTCAGCTGTTCCTATCCATGCCCACCTGCATGTCCAGGCTCTTGGCATGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp GGCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACACTGCTCAGAGATGCTaGGCTGCCACCCTCTGTGGG +
Preference number: 3 (lower is better)
Translates to: GCTQDATELLGGFLSAPHTAQRC*AATLCG
Trigger: CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGT...GTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR TCA 72 bp CCTGGGACCTCACCACACCCATACACGGGGACCCAATaGTGGCTCTTGTGGACTATCACGATGGCGTCATCG +
Preference number: 3 (lower is better)
Translates to: PGTSPHPYTGTQ*WLLWTITMASS
Trigger: CGATGACGCCATCGTGATAGTCCACAAGAGCCATCATTGGGTCCCCGTGTATGGGTGTGGTGAGGTCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp AGAGAGGTGCCCAGGCAGCACTGTGGTGAAGCCACCTaGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACC +
Preference number: 3 (lower is better)
Translates to: REVPRQHCGEAT*RRAMASSSLKT
Trigger: GGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACAGTGCTGCCTGGGCACCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 72 bp CTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGCTaGGTCTTCAGGAATCACCTCTGTTACCTGCGTGGT +
Preference number: 3 (lower is better)
Translates to: LLRDAWLPPSVG*VFRNHLCYLRG
Trigger: ACCACGCAGGTAACAGAGGTGATTCCTGAAGACCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 72 bp GCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTaGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: ALLCINPPSALF*AMPVACVWQQL
Trigger: CAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp TCTCCACCGCTCATGCCAAGAGCCTGGACATGCAGGTaGGCATGGATAGGAACAGCTGAGTGGGAGTGTCAG +
Preference number: 3 (lower is better)
Translates to: SPPLMPRAWTCR*AWIGTAEWECQ
Trigger: CTGACACTCCCACTCAGCTGTTCCTATCCATGCCCACCTGCATGTCCAGGCTCTTGGCATGAGCGGTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCCCTGACTTGTTCACTTaGAGCAGTGGCAGCAGCGAG +
Preference number: 3 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCPDLFT*SSGSSE
Trigger: CTCGCTGCTGCCACTGCTCAAAGTGAACAAGTCAGG...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp ACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGTCTGGGCGATGCCTGTaGCTTGTGTGTGGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: TSSDDEAYCLSTAHAKSLSGRCL*LVCGSS
Trigger: GCTGCTGCCACACACAAGCAACAGGCATCGCCCAGA...CAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR TCA 72 bp GCTGACCCTACAAATCCCCTTCTGTGGCAGCAAGGCTaGGTAGCCTTCTGGTCCTCTTGTGGTGGCAAGGTG +
Preference number: 3 (lower is better)
Translates to: ADPTNPLLWQQG*VAFWSSCGGKV
Trigger: CACCTTGCCACCACAAGAGGACCAGAAGGCTACTCAGCCTTGCTGCCACAGAAGGGGATTTGTAGGGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR TCA 72 bp AAGGTGAGAGGAGGGGCTTCCTCATTCTTCAGGGCCTaGCTTGTTCACTTTGAGCAGTGGCAGCAGCGAGCC +
Preference number: 3 (lower is better)
Translates to: KVRGGASSFFRA*LVHFEQWQQRA
Trigger: GGCTCGCTGCTGCCACTGCTCAAAGTGAACAAGTCAGGCCCTGAAGAATGAGGAAGCCCCTCCTCTCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp AAGTGGCAGGGTGGTGATGTTGTGGCTCATCTGCCCTaGAATCGAGAGATAGGCACAGCGCACAACGGAACC +
Preference number: 3 (lower is better)
Translates to: KWQGGDVVAHLP*NREIGTAHNGT
Trigger: GGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAGATGAGCCACAACATCACCACCCTGCCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 72 bp TGTCGGTGTGGGGTGGTTTCGGTTGGGGGCAGCACATaGCTGGACACCATCACTGTGGAAGTTTCTGCATTC +
Preference number: 3 (lower is better)
Translates to: CRCGVVSVGGST*LDTITVEVSAF
Trigger: GAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCACACCGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp ACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCGTGAGGGCCTCCAGTTaGCGCCTGAGACCCCAGACC +
Preference number: 3 (lower is better)
Translates to: TELLGGFLSAPHQKKCYLVRASS*RLRPQT
Trigger: GGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCAC...GAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CAA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTCTTCAGGGCCTGACTaGTTCACTTTGAGCAGTGGC +
Preference number: 3 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCSSGPD*FTLSSG
Trigger: GCCACTGCTCAAAGTGAACAAGTCAGGCCCTGAAGA...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR TCA 72 bp GGCCAGTGTGACAATGGATGTTCCTCGTGGTGGCTGTaGACAGCCTTACTCTGTATCAACCCTCCTTCCGCC +
Preference number: 3 (lower is better)
Translates to: GQCDNGCSSWWL*TALLCINPPSA
Trigger: GGCGGAAGGAGGGTTGATACAGAGTAAGGCTGTTCACAGCCACCACGAGGAACATCCATTGTCACACTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR TCA 72 bp AGCCTGGACATGCAGGTGGGCATGGATAGGAACAGCTaGGTGGGAGTGTCAGTGGCACTGGAGTATGCAACA +
Preference number: 3 (lower is better)
Translates to: SLDMQVGMDRNS*VGVSVALEYAT
Trigger: TGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCATGCCCACCTGCATGTCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 72 bp GTGGAGCCCCAGAGCACTGAGGTGGCACCAGAGCCATaGCTAGTGATGTTCAGAACAGAGGGCATGCAAAAT +
Preference number: 3 (lower is better)
Translates to: VEPQSTEVAPEP*LVMFRTEGMQN
Trigger: ATTTTGCATGCCCTCTGTTCTGAACATCACTAGGCATGGCTCTGGTGCCACCTCAGTGCTCTGGGGCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 72 bp CAGCACATGGCTGGACACCATCACTGTGGAAGTTTCTaGATTCATTCCCAGGAGGTGGAGCCCCAGAGCACT +
Preference number: 3 (lower is better)
Translates to: QHMAGHHHCGSF*IHSQEVEPQST
Trigger: AGTGCTCTGGGGCTCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp CCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTaGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: PAWSLMEIAGVS*SRSEPAFLQPG
Trigger: GCCTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 72 bp GGTGTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTaGACACCATCACTGTGGAAGTTTCTGCATTCATTC +
Preference number: 3 (lower is better)
Translates to: GVGWFRLGAAHG*TPSLWKFLHSF
Trigger: GAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp AGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCCTGTaGGATCCTAAGTCTTTGTGGTGGGAGCTGGGTGTC +
Preference number: 3 (lower is better)
Translates to: RKSQERDSPKGL*DPKSLWWELGV
Trigger: GACACCCAGCTCCCACCACAAAGACTTAGGATCCCACAGGCCTTTGGGACTGTCACGCTCTTGGCTTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp AAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTaGACATGCAGGTGGGCATGGATAGGAACAGCTGAG +
Preference number: 3 (lower is better)
Translates to: KLTVSPPLMPRA*TCRWAWIGTAE
Trigger: CTCAGCTGTTCCTATCCATGCCCACCTGCATGTCCAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGGGCAGGCAGCTGACCTaGGATGGTCCAGCAGTTTCC +
Preference number: 3 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKGRQLT*DGPAVS
Trigger: GGAAACTGCTGGACCATCCAAGGTCAGCTGCCTGCC...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR-3UTR CAA 90 bp GCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCTTACCTGCGTGGTCTTaGATGGAAATCGCTGGGGTT +
Preference number: 3 (lower is better)
Translates to: AARRMLQNFWVDSFQLRTLPAWS*MEIAGV
Trigger: AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAA...GGTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CAA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGGCCCAAGCCATGGTGTaGTGGAGGGCATGGAAAGGA +
Preference number: 3 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQAQAMV*WRAWKG
Trigger: TCCTTTCCATGCCCTCCACAACACCATGGCTTGGGC...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR TCA 72 bp GAAACCACAGGAGGTGGAGCTGAGGGATGCTACATGTaGGTGTGTGCCAGGGGTATCTCTAGGAACTTGGGA +
Preference number: 3 (lower is better)
Translates to: ETTGGGAEGCYM*VCARGISRNLG
Trigger: TCCCAAGTTCCTAGAGATACCCCTGGCACACACTCACATGTAGCATCCCTCAGCTCCACCTCCTGTGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 72 bp CGTGTGCATCTCTGTGTGTGTGTGCACGCCTTTGTGTaGCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGC +
Preference number: 3 (lower is better)
Translates to: RVHLCVCVHAFV*LKNVVQPVGTS
Trigger: GCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCGTGCACACACACACAGAGATGCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 72 bp GCAGCAAGGCTGAGTAGCCTTCTGGTCCTCTTGTGGTaGCAAGGTGGTATTTATGGGGAGCATATCCCCTTC +
Preference number: 3 (lower is better)
Translates to: AARLSSLLVLLW*QGGIYGEHIPF
Trigger: GAAGGGGATATGCTCCCCATAAATACCACCTTGCCACCACAAGAGGACCAGAAGGCTACTCAGCCTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 72 bp ATATGTGACACACCACAGCATAGGGCATGTCGTGGATaGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCC +
Preference number: 3 (lower is better)
Translates to: ICDTPQHRACRG*RSRKSQERDSP
Trigger: GGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGCCCTATGCTGTGGTGTGTCACATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp TGGGCATGGATAGGAACAGCTGAGTGGGAGTGTCAGTaGCACTGGAGTATGCAACACCAAGTGTGTACGTGC +
Preference number: 3 (lower is better)
Translates to: WAWIGTAEWECQ*HWSMQHQVCTC
Trigger: GCACGTACACACTTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCATGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp TGGACATGCAGGTGGGCATGGATAGGAACAGCTGAGTaGGAGTGTCAGTGGCACTGGAGTATGCAACACCAA +
Preference number: 3 (lower is better)
Translates to: WTCRWAWIGTAE*ECQWHWSMQHQ
Trigger: TTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCATGCCCACCTGCATGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp GGGCAGCACATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGAGTCAGGTCCTGAAGTaGATGGCCCATCCTCATGAC +
Preference number: 3 (lower is better)
Translates to: GQHMAGHHHCGSFCIHSQSQVLK*MAHPHD
Trigger: GTCATGAGGATGGGCCATCAACTTCAGGACCTGACT...CTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp GCTCTTGTGGACTATCACGATGGCGTCATCGCCAGCACGGTGACTCCCCTGAAGAATGTGCAAAGGACCTaGAATGTGGTGCCATATGTG +
Preference number: 3 (lower is better)
Translates to: ALVDYHDGVIASTVTPLKNVQRT*NVVPYV
Trigger: CACATATGGCACCACATTCAAGGTCCTTTGCACATT...CTTCAGGGGAGTCACCGTGCTGGCGATGACGCCATCGTGATAGTCCACAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CCA 72 bp GGGCTGGGTCTTCAGGAATCACCTCTGTTACCTGCGTaGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCA +
Preference number: 3 (lower is better)
Translates to: GLGLQESPLLPA*SLMEIAGVSWS
Trigger: TGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAGACCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CAA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTGGACTATTCGAATTTaGGATTGCACCCCACTTTCA +
Preference number: 3 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCWTIRI*DCTPLS
Trigger: TGAAAGTGGGGTGCAATCCAAAATTCGAATAGTCCA...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp AACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCTACAAGCCTTCTGGTCCTCTaGTGGTGGCAAGGTGGTATT +
Preference number: 3 (lower is better)
Translates to: NFWVDSFQLRTRRNAISTSLLVL*WWQGGI
Trigger: AATACCACCTTGCCACCACAAGAGGACCAGAAGGCT...TGTAGAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CAA 90 bp GGGCAGCACATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGCTCATTTCAGTTTCATaGCCACTTTCCTCTCTTTCC +
Preference number: 3 (lower is better)
Translates to: GQHMAGHHHCGSFCIHSQLISVS*PLSSLS
Trigger: GGAAAGAGAGGAAAGTGGCAATGAAACTGAAATGAG...CTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR TCA 72 bp GTCTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTTaGTGGAAATCGCTGGGGTTTCTTGGTCAAGATCTG +
Preference number: 3 (lower is better)
Translates to: VFRNHLCYLRGL*WKSLGFLGQDL
Trigger: CAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CCA 72 bp CCTTCTGGTCCTCTTGTGGTGGCAAGGTGGTATTTATaGGGAGCATATCCCCTTCATTTTGTCTCTGCAAAC +
Preference number: 3 (lower is better)
Translates to: PSGPLVVARWYL*GAYPLHFVSAN
Trigger: GTTTGCAGAGACAAAATGAAGGGGATATGCTCCCCATAAATACCACCTTGCCACCACAAGAGGACCAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR-3UTR CAA 90 bp GGGCAGCACATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGCAATGGTGCTTAATCTaGAGAGGTAATGAATGGGTA +
Preference number: 3 (lower is better)
Translates to: GQHMAGHHHCGSFCIHSQQWCLI*RGNEWV
Trigger: TACCCATTCATTACCTCTCAAGATTAAGCACCATTG...CTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 72 bp CTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTaGTACAAGCCAACTCCTGTTAGAGTAAAACGTGTA +
Preference number: 3 (lower is better)
Translates to: LSSLSWWYKPSG*YKPTPVRVKRV
Trigger: TACACGTTTTACTCTAACAGGAGTTGGCTTGTAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR-3UTR CAA 90 bp CATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGAGGTGGACCAAAAATGGAATACTaGAATGGGTTCAACCTCATA +
Preference number: 3 (lower is better)
Translates to: HGWTPSLWKFLHSFPGGGPKMEY*NGFNLI
Trigger: TATGAGGTTGAACCCATTCAAGTATTCCATTTTTGG...TCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 72 bp ATCCACATCAACAGGAAAATGACAAGGCTTCAATGGTaGTTAATCTTGAGAGGTAATGAATGGGTAGAGATT +
Preference number: 3 (lower is better)
Translates to: IHINRKMTRLQW*LILRGNEWVEI
Trigger: AATCTCTACCCATTCATTACCTCTCAAGATTAAGCACCATTGAAGCCTTGTCATTTTCCTGTTGATGTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR GCA 72 bp CAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTaGATTTTAAAGGCTATACAGTACAACAGACAGATA +
Preference number: 3 (lower is better)
Translates to: QDVFLKRVSFLD*ILKAIQYNRQI
Trigger: TATCTGTCTGTTGTACTGTATAGCCTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp ATGAGGGAACCGCCGCTGCACACCCACGGAGGGCCCTGCCCATCTACCTGGGGCCAGCGCTCCGCTCCGTaGGCCGCAGTGCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: MREPPLHTHGGPCPSTWGQRSAP*AAVPAP
Trigger: TGGAGCCGGCACTGCGGCGCACGGAGCGGAGCGCTG...GCCCCAGGTAGATGGGCAGGGCCCTCCGTGGGTGTGCAGCGGCGGTTCCCTCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp TGGGCAGTGGCTGGACTGATGAGGGAACCGCCGCTGCACACCCACGGAGGGCCCCGTCCCCGTCAGAGCTaGTGTCCAAGGGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: WAVAGLMREPPLHTHGGPRPRQS*CPRVGA
Trigger: GGCCCCCACCCTTGGACATCAGCTCTGACGGGGACG...GGGCCCTCCGTGGGTGTGCAGCGGCGGTTCCCTCATCAGTCCAGCCACTGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCACGGAGCCCCTTGGCCCTaGGTCTGGGCCCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QGLREGPLLCLREVPRQHGAPWP*VWARQW
Trigger: CCACTGCCGGGCCCAGACCCAGGGCCAAGGGGCTCC...GTGCTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCACCTTGTACCGGGTTGGGGTGGGTaGGCCCTGGGAGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: VRASSLRLRPQTQVPHLVPGWGG*ALGAPW
Trigger: CCAAGGGGCTCCCAGGGCTCACCCACCCCAACCCGG...TACAAGGTGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGGGCAGTGGCTGGACTGATGAGGGAACCGCCGCTGCACACCCACGGAGGGCCCCCCCCAGATGGAGTCTaGGGCTCCAGGAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: WAVAGLMREPPLHTHGGPPPDGV*GSRRLH
Trigger: GTGCAGCCTCCTGGAGCCCCAGACTCCATCTGGGGG...GGGCCCTCCGTGGGTGTGCAGCGGCGGTTCCCTCATCAGTCCAGCCACTGCCCA
69% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCACGGGCCTAGTGGGCTGTaGGGGCCTCCAGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: QGLREGPLLCLREVPRQHGPSGL*GPPVCA
Trigger: GGCGCAAACTGGAGGCCCTCACAGCCCACTAGGCCC...GTGCTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp ATGAGGGAACCGCCGCTGCACACCCACGGAGGGCCCTGCCCATCTACCTGGGGCCAGGCAGCACTGTGGTaGAGCCACCTGGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: MREPPLHTHGGPCPSTWGQAALW*SHLEKG
Trigger: GCCCTTCTCCAGGTGGCTTCACCACAGTGCTGCCTG...GCCCCAGGTAGATGGGCAGGGCCCTCCGTGGGTGTGCAGCGGCGGTTCCCTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCACTCCGGGGTCTGGCTCTaGCCCATTCGCGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: QGLREGPLLCLREVPRQHSGVWL*PIRVQA
Trigger: GGCCTGCACGCGAATGGGTCAGAGCCAGACCCCGGA...GTGCTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp AGGCAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGGGGGTCCTCTGCTCCTaGTGGTGTCGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RQGLREGPLLCLREVPRQGVLCS*WCRPGL
Trigger: CAGCCCTGGCCGACACCAGCAGGAGCAGAGGACCCC...CTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCACCTTGTACCTTGGCCCTGGGTCTaGGCCCGGCAGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VRASSLRLRPQTQVPHLVPWPWV*ARQWQQ
Trigger: CTGCTGCCACTGCCGGGCCCAGACCCAGGGCCAAGG...TACAAGGTGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTCAGCGCTCCGCTCCGTaGGCCGCAGTGCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPWNREIGTAHNGTSLGPQRSAP*AAVPAP
Trigger: TGGAGCCGGCACTGCGGCGCACGGAGCGGAGCGCTG...AGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp GGCAGAGTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGCAGCGCTCCGCTCCGTaGGCCGCAGTGCCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRVMAAGDASRDTAQRCLQRSAP*AAVPAP
Trigger: TGGAGCCGGCACTGCGGCGCACGGAGCGGAGCGCTG...CAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCACTCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GTGGGCTGTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCAAGTCAGCGAGTAGGGTaGTGGTGCGTCCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: VGCEGLQFAPETPDPGPPSQRVG*WCVRGD
Trigger: GTCCCCACGGACGCACCACCACCCTACTCGCTGACT...TGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCACAGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCACCTTGTAGCGTGCAGGCCACAGTaGTCGGCCAGGCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: VRASSLRLRPQTQVPHLVACRPQ*SARQGL
Trigger: CAGTCCCTGCCTGGCCGACCACTGTGGCCTGCACGC...TACAAGGTGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCACCTTGTATGGGGGCCAGTCCTCTaGGGAGCTGCAGGCATAGCG +
Preference number: 4 (lower is better)
Translates to: VRASSLRLRPQTQVPHLVWGPVL*GAAGIA
Trigger: CGCTATGCCTGCAGCTCCTCAGAGGACTGGCCCCCA...TACAAGGTGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATCCGGGTTGGGGTGGGTaGGCCCTGGGAGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHPGWGG*ALGAPW
Trigger: CCAAGGGGCTCCCAGGGCTCACCCACCCCAACCCGG...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCGGGCCTAGTGGGCTGTaGGGGCCTCCAGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: VMAAGDASRDTAQRCLAAGPSGL*GPPVCA
Trigger: GGCGCAAACTGGAGGCCCTCACAGCCCACTAGGCCC...GGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp GTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCACCTTGTACAGGGCTGTGGCCGCTaGCTGAGTCGGAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: VRASSLRLRPQTQVPHLVQGCGR*LSRRCH
Trigger: ATGGCACCTCCGACTCAGGCAGCGGCCACAGCCCTG...TACAAGGTGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CCATCCCCAGCTATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGTGGGCCGGGGTCCTCTaGTCCTGCTGGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PSPAMSSHLEGQHQLRGLWAGVL*SCWCRP
Trigger: TGGCCGACACCAGCAGGAGCAGAGGACCCCGGCCCA...CAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATAGCTGGGGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TCTGAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCGGCTCAAGCGCCAGCAGTGCCCTCTaGCAGGGCCGTCTCGGACCC +
Preference number: 4 (lower is better)
Translates to: SELCLLWVLASFSVPGSSASSAL*QGRLGP
Trigger: GGGTCCGAGACGGCCCTGGCAGAGGGCACTGCTGGC...GCTTGAGCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CCA 90 bp GTGGGCTGTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCAGGGGACACGAGCAGATaGCTGTGCTCCGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VGCEGLQFAPETPDPGPPGDTSR*LCSELS
Trigger: AGAGAGCTCGGAGCACAGCCATCTGCTCGTGTCCCC...TGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCACAGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GTGGGCTGTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCACAGCGAGTAGGGTGGTaGTGCGTCCGTGGGGACATA +
Preference number: 4 (lower is better)
Translates to: VGCEGLQFAPETPDPGPPQRVGW*CVRGDI
Trigger: TATGTCCCCACGGACGCACCACCACCCTACTCGCTG...TGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCACAGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCACAGTCAGCGAGTAGGGTaGTGGTGCGTCCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QGLREGPLLCLREVPRQHSQRVG*WCVRGD
Trigger: GTCCCCACGGACGCACCACCACCCTACTCGCTGACT...GTGCTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CCCTTAGTCCTGGGCAGTGGCTGGACTGATGAGGGAACCGCCGCTGCACACCCAGTCCTCTGCTCCTGCTaGTGTCGGCCAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PLVLGSGWTDEGTAAAHPVLCSC*CRPGLW
Trigger: CCACAGCCCTGGCCGACACCAGCAGGAGCAGAGGAC...TGGGTGTGCAGCGGCGGTTCCCTCATCAGTCCAGCCACTGCCCAGGACTAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGCTGGGTCTTCAGGAATCGGAGCCCCTTGGCCCTaGGTCTGGGCCCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HCSEMLGCHPLWAGSSGIGAPWP*VWARQW
Trigger: CCACTGCCGGGCCCAGACCCAGGGCCAAGGGGCTCC...GATTCCTGAAGACCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp AGGCAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCCAGCAGGACCCGGCTaGCTGGGTCCCTCACACAAT +
Preference number: 4 (lower is better)
Translates to: RQGLREGPLLCLREVPRQPAGPG*LGPSHN
Trigger: ATTGTGTGAGGGACCCAGCCAGCCGGGTCCTGCTGG...CTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CCCTTAGTCCTGGGCAGTGGCTGGACTGATGAGGGAACCGCCGCTGCACACCCACTGGGTACAGCTCCCTaGGCACCGTGGCATCCACGT +
Preference number: 4 (lower is better)
Translates to: PLVLGSGWTDEGTAAAHPLGTAP*APWHPR
Trigger: ACGTGGATGCCACGGTGCTCAGGGAGCTGTACCCAG...TGGGTGTGCAGCGGCGGTTCCCTCATCAGTCCAGCCACTGCCCAGGACTAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGTCCATGGAGACCGTGTaGAGGCCACCTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GDASRDTAQRCLAATLCGSMETV*RPPWAG
Trigger: CCCGGCCCAAGGTGGCCTTCACACGGTCTCCATGGA...CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CCATCCCCAGCTATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGCCTCCAGTTTGCGCCTaGGACCCCAGACCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PSPAMSSHLEGQHQLRGLPPVCA*DPRPRS
Trigger: GGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGG...CAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATAGCTGGGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp TATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGGCTCTGACCCACGGCCAGGCAGGGACTaGGGGAGGGGCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: YEQPPRRTAPAPGSGSDPRPGRD*GRGHFS
Trigger: AGAGAAGTGGCCCCTCCCTCAGTCCCTGCCTGGCCG...TGGGTCAGAGCCAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp GTGGGCTGTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCAAGGCATAGCGCATCCTaGGGCTTGAGCGGCTGTATG +
Preference number: 4 (lower is better)
Translates to: VGCEGLQFAPETPDPGPPRHSAS*GLSGCM
Trigger: CATACAGCCGCTCAAGCCGCAGGATGCGCTATGCCT...TGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCACAGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp GAGCCACTGGGGAGGCTGTTGGGGGCTGTTGAGACCTCAGATGGGCTCAGAGCCCCCCCTCGAGGCAGCTaGAGGGCTTCACCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: EPLGRLLGAVETSDGLRAPPRGS*RASPAF
Trigger: AAAGGCTGGTGAAGCCCTGCAGCTGCCTCGAGGGGG...GGCTCTGAGCCCATCTGAGGTCTCAACAGCCCCCAACAGCCTCCCCAGTGGCTC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR GCA 90 bp CTGGGGAGGCTGTTGGGGGCTGTTGAGACCTCAGATGGGCTCAGAGCCATGGGCATCTCTGGCCAGCAGTaGCCTCTGCCAGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: LGRLLGAVETSDGLRAMGISGQQ*PLPGPS
Trigger: AGACGGCCCTGGCAGAGGGCACTGCTGGCCAGAGAT...GCCCATGGCTCTGAGCCCATCTGAGGTCTCAACAGCCCCCAACAGCCTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CCA 90 bp CCCTTAGTCCTGGGCAGTGGCTGGACTGATGAGGGAACCGCCGCTGCACACCCATTGGGCGCAGCTTGCTaGGCGAGGGTAGGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: PLVLGSGWTDEGTAAAHPLGAAC*ARVGAN
Trigger: GTTTGCCCCTACCCTCGCCCAGCAAGCTGCGCCCAA...TGGGTGTGCAGCGGCGGTTCCCTCATCAGTCCAGCCACTGCCCAGGACTAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp GAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCGGCTCAAGCATCCCCGGAACCTGGGCCTaGCTGAACCCCCTCGAGGCA +
Preference number: 4 (lower is better)
Translates to: ELCLLWVLASFSVPGSSIPGTWA*LNPLEA
Trigger: TGCCTCGAGGGGGTTCAGCCAGGCCCAGGTTCCGGG...GATGCTTGAGCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CCA 90 bp CCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCAGCAGAGCCAGCCTTaGCCTGTCCAGCAGGGACGT +
Preference number: 4 (lower is better)
Translates to: PPSSGRCLLLVCGSSCWSQQSQP*PVQQGR
Trigger: ACGTCCCTGCTGGACAGGCCAAGGCTGGCTCTGCTG...GCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 72 bp TGGTGGGAGCTGGGTGTCGGTGTGGGGTGGTTTCGGTaGGGGGCAGCACATGGCTGGACACCATCACTGTGG +
Preference number: 4 (lower is better)
Translates to: WWELGVGVGWFR*GAAHGWTPSLW
Trigger: CCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCACACCGACACCCAGCTCCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp CTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTTGGGGGCCAGTCCTCTaGGGAGCTGCAGGCATAGCG +
Preference number: 4 (lower is better)
Translates to: LPWNREIGTAHNGTSLGPWGPVL*GAAGIA
Trigger: CGCTATGCCTGCAGCTCCTCAGAGGACTGGCCCCCA...AGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp ACCCCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTTGGGGGCCAGTCCTCTaGGGAGCTGCAGGCATAGCG +
Preference number: 4 (lower is better)
Translates to: TPDPGPPPCKWQGGDVVAWGPVL*GAAGIA
Trigger: CGCTATGCCTGCAGCTCCTCAGAGGACTGGCCCCCA...AGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGCTGGGTCTTCAGGAATCCGGCCAGGCAGGGACTaGGGGAGGGGCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: HCSEMLGCHPLWAGSSGIRPGRD*GRGHFS
Trigger: AGAGAAGTGGCCCCTCCCTCAGTCCCTGCCTGGCCG...GATTCCTGAAGACCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CTTTTCTCTGAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCGGCGAACCTGGGCCTGGCTaGACCCCCTCGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFSELCLLWVLASFSVPGEPGPG*TPSRQL
Trigger: CAGCTGCCTCGAGGGGGTTCAGCCAGGCCCAGGTTC...GCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTCAGAGAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR GCA 90 bp GTGGGCTGTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCAAGGCTGCACGCAGGATaGTACAGAACTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VGCEGLQFAPETPDPGPPRLHAG*YRTSGW
Trigger: CCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGCCT...TGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCACAGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCGCTGCTGGAGCCCTTTaGAGAGACCTGGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: RPLLGDACCLCVAAAAGAAAGAL*RDLGPH
Trigger: GTGAGGTCCCAGGTCTCTGCAAAGGGCTCCAGCAGC...GGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp GCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGGCCTTGGCCCTGGGTCTaGGCCCGGCAGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AFVCLKNVVQPVGTSRTRPWPWV*ARQWQQ
Trigger: CTGCTGCCACTGCCGGGCCCAGACCCAGGGCCAAGG...CCGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGCCAGCAGGACCCGGCTaGCTGGGTCCCTCACACAAT +
Preference number: 4 (lower is better)
Translates to: GDASRDTAQRCLAATLCGPAGPG*LGPSHN
Trigger: ATTGTGTGAGGGACCCAGCCAGCCGGGTCCTGCTGG...CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGGGCAGTGGCTGGACTGATGAGGGAACCGCCGCTGCACACCCACGGAGGGCCCAGGGTGGTGATGTTGTaGCTCATCTGCCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: WAVAGLMREPPLHTHGGPRVVML*LICPGI
Trigger: GATTCCAGGGCAGATGAGCCACAACATCACCACCCT...GGGCCCTCCGTGGGTGTGCAGCGGCGGTTCCCTCATCAGTCCAGCCACTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGCCCTGCCCATCTACCTaGGGCCTGCAGCGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GDASRDTAQRCLAATLCGPCPST*GLQRQR
Trigger: TCTCTGACGCTGCAGGCCCCAGGTAGATGGGCAGGG...CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCGTCCTGGGCAGTGGCTaGACTGATGAGGGAACCGCC +
Preference number: 4 (lower is better)
Translates to: VMAAGDASRDTAQRCLAAVLGSG*TDEGTA
Trigger: GGCGGTTCCCTCATCAGTCCAGCCACTGCCCAGGAC...GGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CTGGGGAGGCTGTTGGGGGCTGTTGAGACCTCAGATGGGCTCAGAGCCATGGGCCCAGCCTGCCCAGGATaGCGTCCAGTTTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGRLLGAVETSDGLRAMGPACPG*RPVCVW
Trigger: CCAGACACAAACTGGACGCCATCCTGGGCAGGCTGG...GCCCATGGCTCTGAGCCCATCTGAGGTCTCAACAGCCCCCAACAGCCTCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CCA 90 bp CCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCTGGGGTGGTTTCGGTTaGGGGCAGCACATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PPSSGRCLLLVCGSSCWSWGGFG*GQHMAG
Trigger: TCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCA...GCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp GGTGTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTGGACACCATCACTGTGGAGCTGGGTGTCGGTGTaGGGTGGTTTCGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GVGWFRLGAAHGWTPSLWSWVSV*GGFGWG
Trigger: CCCCCAACCGAAACCACCCCACACCGACACCCAGCT...CCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATCCTCCAGTTTGCGCCTaGGACCCCAGACCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHPPVCA*DPRPRS
Trigger: GGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGG...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GGCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACGGGCCTAGTGGGCTGTaGGGGCCTCCAGTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: GCTQDATELLGGFLSAPHGPSGL*GPPVCA
Trigger: GGCGCAAACTGGAGGCCCTCACAGCCCACTAGGCCC...GTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp AGGCAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGTGGCCTCATCTTCCTTaGAGACCCTTAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RQGLREGPLLCLREVPRQWPHLP*RPLVLG
Trigger: GCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCA...CTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTGTCAGGCAGCACTGTGGTaGAGCCACCTGGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ALESRDRHSAQRNLTGACQAALW*SHLEKG
Trigger: GCCCTTCTCCAGGTGGCTTCACCACAGTGCTGCCTG...ACAGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCTCCGGGGTCTGGCTCTaGCCCATTCGCGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: AARRMLQNFWVDSFQLRTSGVWL*PIRVQA
Trigger: GGCCTGCACGCGAATGGGTCAGAGCCAGACCCCGGA...GGTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GGCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACTCCGGGGTCTGGCTCTaGCCCATTCGCGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GCTQDATELLGGFLSAPHSGVWL*PIRVQA
Trigger: GGCCTGCACGCGAATGGGTCAGAGCCAGACCCCGGA...GTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATTGCCTGAGTCGGAGGTaGCATCCAGCGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHCLSRR*HPAWGR
Trigger: CCTGCCCCACGCTGGATGGCACCTCCGACTCAGGCA...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp GGCAGAGTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGAGGGGCCACTTCTCTaGCTCAGAGAGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRVMAAGDASRDTAQRCLEGPLL*LREVPR
Trigger: CCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTC...CAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCACTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CCATCCCCAGCTATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGTCAGAGATGCTTGGCTaGCACCCTCTGTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSPAMSSHLEGQHQLRGLSEMLG*HPLWAG
Trigger: CCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGA...CAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATAGCTGGGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp GAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCGGCTCAAGCATCCCGTGTAGCCCAGCCTaGCCAGGATGGCGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ELCLLWVLASFSVPGSSIPCSPA*PGWRPV
Trigger: AACTGGACGCCATCCTGGGCAGGCTGGGCTACACGG...GATGCTTGAGCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR GCA 90 bp CGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCCCCTCTTCTGGGCGATaGCTGTTGCTTGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RPLLGDACCLCVAAAAGAPSSGR*LLLVCG
Trigger: GCCACACACAAGCAACAGGCATCGCCCAGAAGAGGG...GGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp CAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCACCTCCTCGTAGCCTGGTaGAGAATCTGGGTACAGCTC +
Preference number: 4 (lower is better)
Translates to: QGLREGPLLCLREVPRQHLLVAW*RIWVQL
Trigger: GAGCTGTACCCAGATTCTCCACCAGGCTACGAGGAG...GTGCTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCACGCAGCTGACCTTGGATaGTCCAGCAGTTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QGLREGPLLCLREVPRQHAADLG*SSSFQR
Trigger: CCTCTGGAAACTGCTGGACCATCCAAGGTCAGCTGC...GTGCTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp AGGCAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCCCCCACCTTGTAAGTaGCAGGGTGGTGATGTTGTG +
Preference number: 4 (lower is better)
Translates to: RQGLREGPLLCLREVPRQPPPCK*QGGDVV
Trigger: CACAACATCACCACCCTGCCACTTACAAGGTGGGGG...CTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GTGGGCTGTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCAATCGCTGGGGTTTCTTaGTCAAGATCTGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VGCEGLQFAPETPDPGPPIAGVS*SRSEPA
Trigger: GGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGAT...TGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCACAGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTGTATGTGCGCACCCCCAGATGGAGTCTaGGGCTCCAGGAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SRDRHSAQRNLTGACMCAPPDGV*GSRRLH
Trigger: GTGCAGCCTCCTGGAGCCCCAGACTCCATCTGGGGG...TGCGCACATACAGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562849.6
CDS-3UTR CCA 90 bp CCTAGCGAGTTTCTCTGTGCCCGGCTCAAGCATCCGTGTGCCCGCGGTTCTGAGCACTGGGGAGGCTGTTaGGGGCTGTTGAGACCTCAG +
Preference number: 4 (lower is better)
Translates to: PSEFLCARLKHPCARGSEHWGGC*GLLRPQ
Trigger: CTGAGGTCTCAACAGCCCCCAACAGCCTCCCCAGTG...CTCAGAACCGCGGGCACACGGATGCTTGAGCCGGGCACAGAGAAACTCGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR TCA 90 bp CTTTTCTCTGAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCGGCCTGGGTACAGCTCCCTaGGCACCGTGGCATCCACGT +
Preference number: 4 (lower is better)
Translates to: LFSELCLLWVLASFSVPGLGTAP*APWHPR
Trigger: ACGTGGATGCCACGGTGCTCAGGGAGCTGTACCCAG...GCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTCAGAGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR TCA 90 bp GCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGGTCCATGGAGACCGTGTaGAGGCCACCTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: AFVCLKNVVQPVGTSRTRSMETV*RPPWAG
Trigger: CCCGGCCCAAGGTGGCCTTCACACGGTCTCCATGGA...CCGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GGCAGAGTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGCTAGCACCACCTGACTaGGGGACTGAGGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: GRVMAAGDASRDTAQRCLLAPPD*GTEGTG
Trigger: CCCAGTACCCTCAGTCCCTCAGTCAGGTGGTGCTAG...CAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCACTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCGGAGCCCCAGAGCACTaGGGTGGCACCAGAGCCATG +
Preference number: 4 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCGAPEH*GGTRAM
Trigger: CATGGCTCTGGTGCCACCTCAGTGCTCTGGGGCTCC...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp CCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCGAAAAGCCAAGAGCGTaGCAGTCCCAAAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PPSSGRCLLLVCGSSCWSEKPRA*QSQRPV
Trigger: CACAGGCCTTTGGGACTGTCACGCTCTTGGCTTTTC...GCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp CTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTCGAGTAGGGTGGTGGTaGGTCCGTGGGGACATACAG +
Preference number: 4 (lower is better)
Translates to: LPWNREIGTAHNGTSLGPRVGWW*VRGDIQ
Trigger: CTGTATGTCCCCACGGACGCACCACCACCCTACTCG...AGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TGTGGCTCATCTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCCAGGGCTGTGGCCGCTaGCTGAGTCGGAGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: CGSSALESRDRHSAQRNLQGCGR*LSRRCH
Trigger: ATGGCACCTCCGACTCAGGCAGCGGCCACAGCCCTG...GAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAGATGAGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp ATGAGGGAACCGCCGCTGCACACCCACGGAGGGCCCTGCCCATCTACCTGGGGCGTTATGAGTCACGTGTaGATCTCTGTGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: MREPPLHTHGGPCPSTWGVMSHV*ISVCVC
Trigger: GCACACACACACAGAGATGCACACGTGACTCATAAC...GCCCCAGGTAGATGGGCAGGGCCCTCCGTGGGTGTGCAGCGGCGGTTCCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp GTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTGGACACCATCACTGTGGAAGCCTGCAGTGGTGACCTaGTTGGTGACCCCCTCACTG +
Preference number: 4 (lower is better)
Translates to: VGWFRLGAAHGWTPSLWKPAVVT*LVTPSL
Trigger: CAGTGAGGGGGTCACCAAGCAGGTCACCACTGCAGG...CTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp GCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTGTGGGGACACGAGCAGATaGCTGTGCTCCGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ALESRDRHSAQRNLTGACGDTSR*LCSELS
Trigger: AGAGAGCTCGGAGCACAGCCATCTGCTCGTGTCCCC...ACAGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTGTGGACATACAGCTGAGTaGCCCCTGGCCCCACACACT +
Preference number: 4 (lower is better)
Translates to: ALESRDRHSAQRNLTGACGHTAE*PLAPHT
Trigger: AGTGTGTGGGGCCAGGGGCCACTCAGCTGTATGTCC...ACAGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTGGACATACAGCTGAGTaGCCCCTGGCCCCACACACT +
Preference number: 4 (lower is better)
Translates to: LPWNREIGTAHNGTSLGPGHTAE*PLAPHT
Trigger: AGTGTGTGGGGCCAGGGGCCACTCAGCTGTATGTCC...AGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGGCTCTGACCCAGTGGTGGTGCGTCCGTaGGGACATACAGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: YEQPPRRTAPAPGSGSDPVVVRP*GHTAEW
Trigger: CCACTCAGCTGTATGTCCCCACGGACGCACCACCAC...TGGGTCAGAGCCAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GGCAGAGTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGCAGCGAGTAGGGTGGTaGTGCGTCCGTGGGGACATA +
Preference number: 4 (lower is better)
Translates to: GRVMAAGDASRDTAQRCLQRVGW*CVRGDI
Trigger: TATGTCCCCACGGACGCACCACCACCCTACTCGCTG...CAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCACTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGCTGGGTCTTCAGGAATCAGTCAGCGAGTAGGGTaGTGGTGCGTCCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: HCSEMLGCHPLWAGSSGISQRVG*WCVRGD
Trigger: GTCCCCACGGACGCACCACCACCCTACTCGCTGACT...GATTCCTGAAGACCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTCCTTGGCCCTGGGTCTaGGCCCGGCAGTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CGEATWRRAMASSSLKTLPWPWV*ARQWQQ
Trigger: CTGCTGCCACTGCCGGGCCCAGACCCAGGGCCAAGG...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CCAGCAGTTTCCAGAGGCAGAATAGAATTTGGGCGCAGCTTGCTGGGCGAGGGTAGGACAAGCTGGCCCTaGGGTAGGGGTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PAVSRGRIEFGRSLLGEGRTSWP*GRGQGR
Trigger: CCTGCCCTGACCCCTACCCCAGGGCCAGCTTGTCCT...ACCCTCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCTCTGGAAACTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp TCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGGCTGACCCCAGGAGGACAAGCTaGCCCTGGGGTAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLGFLGQDLSQPFCSQADPRRTS*PWGRGQ
Trigger: CTGACCCCTACCCCAGGGCCAGCTTGTCCTCCTGGG...GTCAGCCTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp CCATCCCCAGCTATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGCTGCAAACACCCACGTaGGCAAGGCCAGAACACAGC +
Preference number: 4 (lower is better)
Translates to: PSPAMSSHLEGQHQLRGLLQTPT*ARPEHS
Trigger: GCTGTGTTCTGGCCTTGCCCACGTGGGTGTTTGCAG...CAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATAGCTGGGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp ATGAGGGAACCGCCGCTGCACACCCACGGAGGGCCCTGCCCATCTACCTGGGGCCCTCTGTTACCTGCGTaGTCTTTGATGGAAATCGCT +
Preference number: 4 (lower is better)
Translates to: MREPPLHTHGGPCPSTWGPLLPA*SLMEIA
Trigger: AGCGATTTCCATCAAAGACCACGCAGGTAACAGAGG...GCCCCAGGTAGATGGGCAGGGCCCTCCGTGGGTGTGCAGCGGCGGTTCCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp ACCCCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCTGCTCAGAGATGCTTaGCTGCCACCCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: TPDPGPPPCKWQGGDVVALLRDA*LPPSVG
Trigger: GCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAG...AGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCGGCTCAAGCATCACTCAGACTCCAAGGTaGCCGTGTAGCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ELCLLWVLASFSVPGSSITQTPR*PCSPAC
Trigger: GCAGGCTGGGCTACACGGCCACCTTGGAGTCTGAGT...GATGCTTGAGCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CCA 90 bp CGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCGCCTGGACATGCAGGTaGGCATGGATAGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: RPLLGDACCLCVAAAAGAAWTCR*AWIGTA
Trigger: AGCTGTTCCTATCCATGCCCACCTGCATGTCCAGGC...GGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 72 bp GCAGTTTCCAGAGGCAGAATAGAATTTGGGCGCAGCTaGCTGGGCGAGGGTAGGGGCAAACGGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AVSRGRIEFGRS*LGEGRGKRAQE
Trigger: CTCCTGGGCCCGTTTGCCCCTACCCTCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCTCTGGAAACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
3UTR CAA 72 bp GCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTaGGCTGCCACCCTCTGTGGGCTGGGTCTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: AGDASRDTAQRC*AATLCGLGLQE
Trigger: TTCCTGAAGACCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CAA 72 bp TCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTaGCTTGTGTGTGGCAGCAGCTGCTGGAGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: STLLPPSSGRCL*LVCGSSCWSPL
Trigger: CAAAGGGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp GCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCCTGGGTACAGCTCCCTaGGCACCGTGGCATCCACGT +
Preference number: 4 (lower is better)
Translates to: AARRMLQNFWVDSFQLRTLGTAP*APWHPR
Trigger: ACGTGGATGCCACGGTGCTCAGGGAGCTGTACCCAG...GGTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp TTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCGGGTTGGGGTGGGTaGGCCCTGGGAGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LMEIAGVSWSRSEPAFLQPGWGG*ALGAPW
Trigger: CCAAGGGGCTCCCAGGGCTCACCCACCCCAACCCGG...CTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CTTTTCTCTGAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCGGCGCTGTTGGGGGCTGTTaGGACCTCAGATGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LFSELCLLWVLASFSVPGAVGGC*DLRWAQ
Trigger: CTGAGCCCATCTGAGGTCTCAACAGCCCCCAACAGC...GCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTCAGAGAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR GCA 90 bp AGGCAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGGGTAGAAGTAGCTGGTaGGGTTGTATCGTGCTATCG +
Preference number: 4 (lower is better)
Translates to: RQGLREGPLLCLREVPRQGRSSW*GCIVLS
Trigger: CGATAGCACGATACAACCGCACCAGCTACTTCTACC...CTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000562849.6
CDS-3UTR GCA 90 bp GTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCACCTTGTAACGAGCAGATGGCTGTaGTCCGAGCTCTCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: VRASSLRLRPQTQVPHLVTSRWL*SELSEN
Trigger: ATTCTCAGAGAGCTCGGAGCACAGCCATCTGCTCGT...TACAAGGTGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp GGCAGAGTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGAGGCATAGCGCATCCTaGGGCTTGAGCGGCTGTATG +
Preference number: 4 (lower is better)
Translates to: GRVMAAGDASRDTAQRCLRHSAS*GLSGCM
Trigger: CATACAGCCGCTCAAGCCGCAGGATGCGCTATGCCT...CAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCACTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp GTGGGCTGTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCACCTTCATTTTGTCTCTaGAAACACCCACGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VGCEGLQFAPETPDPGPPPSFCL*KHPRGQ
Trigger: TTGCCCACGTGGGTGTTTGCAGAGACAAAATGAAGG...TGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCACAGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CTTTTCTCTGAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCGGCCCTTCTGAGGGACCTTaGTGTGGTCCCCCGGAACCT +
Preference number: 4 (lower is better)
Translates to: LFSELCLLWVLASFSVPGPSEGP*CGPPEP
Trigger: AGGTTCCGGGGGACCACAGCAAGGTCCCTCAGAAGG...GCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTCAGAGAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR GCA 90 bp AGCCTTTTCTCTGAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCCACTGTCCAGGCATGTaGTGCCATGGCACTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SLFSELCLLWVLASFSVPHCPGM*CHGTGG
Trigger: GCCCCCAGTGCCATGGCAGCACATGCCTGGACAGTG...GGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTCAGAGAAAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CCA 90 bp CCCTTAGTCCTGGGCAGTGGCTGGACTGATGAGGGAACCGCCGCTGCACACCCAACACTCCTCGTAGCCTaGTGGAGAATCTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: PLVLGSGWTDEGTAAAHPTLLVA*WRIWVQ
Trigger: CTGTACCCAGATTCTCCACCAGGCTACGAGGAGTGT...TGGGTGTGCAGCGGCGGTTCCCTCATCAGTCCAGCCACTGCCCAGGACTAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATGGGGAAGGGTGTCCATaGAGACCGTGTGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHGEGCP*RPCEGH
Trigger: GTGGCCTTCACACGGTCTCCATGGACACCCTTCCCC...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGCAGGACCCGGCTGGCTaGGTCCCTCACACAATCCTC +
Preference number: 4 (lower is better)
Translates to: RLCVPKECGSACRDQQDPQDPAG*VPHTIL
Trigger: GAGGATTGTGTGAGGGACCCAGCCAGCCGGGTCCTG...CGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGGTCCAGCAGTTTCCAGAGGCAGAATAGAATTTGGGCGCAGCTTGCTGGGCGAAGGACAAGCTGGCCCTaGGGTAGGGGTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: WSSSFQRQNRIWAQLAGRRTSWP*GRGQGR
Trigger: CCTGCCCTGACCCCTACCCCAGGGCCAGCTTGTCCT...TCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCTCTGGAAACTGCTGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp GCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCCCCTGCCCATCTACCTaGGGCCTGCAGCGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: AARRMLQNFWVDSFQLRTPCPST*GLQRQR
Trigger: TCTCTGACGCTGCAGGCCCCAGGTAGATGGGCAGGG...GGTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGGGTCCTGGGCAGTGGCTaGACTGATGAGGGAACCGCC +
Preference number: 4 (lower is better)
Translates to: AFVCLKNVVQPVGTSRTRVLGSG*TDEGTA
Trigger: GGCGGTTCCCTCATCAGTCCAGCCACTGCCCAGGAC...CCGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp AGGCAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCTGGTCCTCTTGTGGTaGCAAGGTGGTATTTATGGG +
Preference number: 4 (lower is better)
Translates to: RQGLREGPLLCLREVPRQLVLLW*QGGIYG
Trigger: CCCATAAATACCACCTTGCCACCACAAGAGGACCAG...CTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp ACCCCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCCACCCTCTGTGGGCTaGGTCTTCAGGAATCACCTC +
Preference number: 4 (lower is better)
Translates to: TPDPGPPPCKWQGGDVVAPPSVG*VFRNHL
Trigger: GAGGTGATTCCTGAAGACCCAGCCCACAGAGGGTGG...AGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CTTTTCTCTGAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCGGCATGGGCAGAGATCTCTaGCCAGCAGTGCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LFSELCLLWVLASFSVPGMGRDL*PAVPSA
Trigger: GGCAGAGGGCACTGCTGGCCAGAGATCTCTGCCCAT...GCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTCAGAGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CCA 90 bp AGTTTCTCTGTGCCCGGCTCAAGCATCCGTGTGCCCGCGGTTCTGAGAACGGCTATGGGCTCAGAGCCATaGGCAGAGATCTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SFSVPGSSIRVPAVLRTAMGSEP*AEISGQ
Trigger: CTGGCCAGAGATCTCTGCCCATGGCTCTGAGCCCAT...AGCCGTTCTCAGAACCGCGGGCACACGGATGCTTGAGCCGGGCACAGAGAAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CCA 90 bp CTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCGAGACCCTGTCCTGGTaGAGAATCTGGGTACAGCTC +
Preference number: 4 (lower is better)
Translates to: LLPPSSGRCLLLVCGSSCETLSW*RIWVQL
Trigger: GAGCTGTACCCAGATTCTCCACCAGGACAGGGTCTC...GCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp CGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCTCCTCTCTTTCCTGGTaGTACAAGCCATCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: RPLLGDACCLCVAAAAGASSLSW*YKPSGC
Trigger: GCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGA...GGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp GTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTGGACACCATCACTGTGGAAGGTTGGGGGCAGCACATaGCTGGACACCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: VGWFRLGAAHGWTPSLWKVGGST*LDTITV
Trigger: CACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAAC...CTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp CAGGTGGGTTTTGTGTTTGTGGTAGGCCTGTATGTGCGCATATTCACACATATGCGGTGGCGGTGCCGCTaGAGCCGGGCCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QVGFVFVVGLYVRIFTHMRWRCR*SRACLS
Trigger: GGACAGGCAGGCCCGGCTTCAGCGGCACCGCCACCG...CATATGTGTGAATATGCGCACATACAGGCCTACCACAAACACAAAACCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR TCA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGCGTCCCCGTCAGAGCTaGTGTCCAAGGGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQRPRQS*CPRVGA
Trigger: GGCCCCCACCCTTGGACATCAGCTCTGACGGGGACG...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATCTGTGGCAGCAAGGCTaGGTAGCCTTCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHLWQQG*VAFWSS
Trigger: AGAGGACCAGAAGGCTACTCAGCCTTGCTGCCACAG...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGTTTCTGCAGCCAGGCTaGCCCTACAAATCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GDASRDTAQRCLAATLCGFLQPG*PYKSPS
Trigger: AGAAGGGGATTTGTAGGGTCAGCCTGGCTGCAGAAA...CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp TGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGCCACGGGCACAGCTCTaGCTTCTCGCAGGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: WKSLGFLGQDLSQPFCSQPRAQL*LLAGKA
Trigger: GGCCTTCCCTGCGAGAAGTCAGAGCTGTGCCCGTGG...CTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536005.7
CDS-3UTR TCA 90 bp AGTTTCTCTGTGCCCGGCTCAAGCATCCGTGTGCCCGCGGTTCTGAGAACGGCTGATGGCCTGGACCAGTaGGAACTCAGACTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SFSVPGSSIRVPAVLRTADGLDQ*ELRLQG
Trigger: ACCTTGGAGTCTGAGTTCTCACTGGTCCAGGCCATC...AGCCGTTCTCAGAACCGCGGGCACACGGATGCTTGAGCCGGGCACAGAGAAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR TCA 90 bp TTGGGGGCATCTAGGACTATGTTAGTGGGCTCTATTGGAGTTCTGGTGGGAGGGGCTTTGTCCAGAGAGTaGTGCTGGCGGGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LGASRTMLVGSIGVLVGGALSRE*CWRGGG
Trigger: ACCCCCGCCCCGCCAGCATCACTCTCTGGACAAAGC...CCCTCCCACCAGAACTCCAATAGAGCCCACTAACATAGTCCTAGATGCCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATAGGCATAGCGCATCCTaGGGCTTGAGCGGCTGTATG +
Preference number: 4 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHRHSAS*GLSGCM
Trigger: CATACAGCCGCTCAAGCCGCAGGATGCGCTATGCCT...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATAGTCCTCTGAGGAGCTaGAGGCATAGCGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHSPLRS*RHSASC
Trigger: GCAGGATGCGCTATGCCTGCAGCTCCTCAGAGGACT...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TGTGGCTCATCTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCCGAGTAGGGTGGTGGTaGGTCCGTGGGGACATACAG +
Preference number: 4 (lower is better)
Translates to: CGSSALESRDRHSAQRNLRVGWW*VRGDIQ
Trigger: CTGTATGTCCCCACGGACGCACCACCACCCTACTCG...GAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAGATGAGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTTGCCTGAGTCGGAGGTaGCATCCAGCGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CGEATWRRAMASSSLKTLCLSRR*HPAWGR
Trigger: CCTGCCCCACGCTGGATGGCACCTCCGACTCAGGCA...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGGCTGACAATTTGGGCGCAGCTTaGTGGGCGAGGGTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLGFLGQDLSQPFCSQADNLGAA*WARVGA
Trigger: TGCCCCTACCCTCGCCCAGCAAGCTGCGCCCAAATT...GTCAGCCTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR GCA 90 bp TGTGGCTCATCTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCAATTTGGGCGCAGCTTaGTGGGCGAGGGTAGGGGCA +
Preference number: 4 (lower is better)
Translates to: CGSSALESRDRHSAQRNLNLGAA*WARVGA
Trigger: TGCCCCTACCCTCGCCCAGCAAGCTGCGCCCAAATT...GAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAGATGAGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR GCA 90 bp TGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTAGTCCTGGGCAGTGGGAGGGGCCACTTCTCTaGCTCAGAGAGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: WRRAMASSSLKTLSPGQWEGPLL*LREVPR
Trigger: CCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTC...CCACTGCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCACCTTGTATGGGGTAGAAGTAGCTaGTGCGGTTGTATCGTGCTA +
Preference number: 4 (lower is better)
Translates to: VRASSLRLRPQTQVPHLVWGRSS*CGCIVL
Trigger: TAGCACGATACAACCGCACCAGCTACTTCTACCCCA...TACAAGGTGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGGTGGTGGTGCGTCCGTaGGGACATACAGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: RLCVPKECGSACRDQQDPVVVRP*GHTAEW
Trigger: CCACTCAGCTGTATGTCCCCACGGACGCACCACCAC...CGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGTGGCTCATCTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCGTGGTGGTGCGTCCGTaGGGACATACAGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: CGSSALESRDRHSAQRNLVVVRP*GHTAEW
Trigger: CCACTCAGCTGTATGTCCCCACGGACGCACCACCAC...GAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAGATGAGCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGTGCACGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGTCCTCTGCTCCTGCTaGTGTCGGCCAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CARLCVPKECGSACRDQQVLCSC*CRPGLW
Trigger: CCACAGCCCTGGCCGACACCAGCAGGAGCAGAGGAC...CTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCGTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTCCCAGGAGGACAAGCTaGCCCTGGGGTAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: CGEATWRRAMASSSLKTLPRRTS*PWGRGQ
Trigger: CTGACCCCTACCCCAGGGCCAGCTTGTCCTCCTGGG...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp TGGTCCAGCAGTTTCCAGAGGCAGAATAGAATTTGGGCGCAGCTTGCTGGGCGAACAACGGAACCTCACTaGGGCCTGTCCCGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: WSSSFQRQNRIWAQLAGRTTEPH*GLSRLP
Trigger: TGGGAGGCGGGACAGGCCCCAGTGAGGTTCCGTTGT...TCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCTCTGGAAACTGCTGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp ACCCCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCCCCCACCTTGTAAGTaGCAGGGTGGTGATGTTGTG +
Preference number: 4 (lower is better)
Translates to: TPDPGPPPCKWQGGDVVAPPPCK*QGGDVV
Trigger: CACAACATCACCACCCTGCCACTTACAAGGTGGGGG...AGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCATCGCTGGGGTTTCTTaGTCAAGATCTGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VMAAGDASRDTAQRCLAAIAGVS*SRSEPA
Trigger: GGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGAT...GGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCGGCTCAAGCATCCGTGTGGAGCTGTGCCTGCTGTaGGTCCTAGCGAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CLLWVLASFSVPGSSIRVELCLL*VLASFS
Trigger: AGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTC...CACACGGATGCTTGAGCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CCA 90 bp GAGCCACTGGGGAGGCTGTTGGGGGCTGTTGAGACCTCAGATGGGCTCAGAGCCCAGTGTACATCCTGGTaGAGAATCTGGGTACAGCTC +
Preference number: 4 (lower is better)
Translates to: EPLGRLLGAVETSDGLRAQCTSW*RIWVQL
Trigger: GAGCTGTACCCAGATTCTCCACCAGGATGTACACTG...GGCTCTGAGCCCATCTGAGGTCTCAACAGCCCCCAACAGCCTCCCCAGTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CCA 90 bp GAGCCACTGGGGAGGCTGTTGGGGGCTGTTGAGACCTCAGATGGGCTCAGAGCCTCCCAGTGTACATCCTaGTGGAGAATCTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: EPLGRLLGAVETSDGLRASQCTS*WRIWVQ
Trigger: CTGTACCCAGATTCTCCACCAGGATGTACACTGGGA...GGCTCTGAGCCCATCTGAGGTCTCAACAGCCCCCAACAGCCTCCCCAGTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CCA 90 bp CGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCCTTTCCTCTCTTTCCTaGTGGTACAAGCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: RPLLGDACCLCVAAAAGALSSLS*WYKPSG
Trigger: CCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAG...GGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp GTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTGGACACCATCACTGTGGAAGCCTAAGTCTTTGTGGTaGGAGCTGGGTGTCGGTGTG +
Preference number: 4 (lower is better)
Translates to: VGWFRLGAAHGWTPSLWKPKSLW*ELGVGV
Trigger: CACACCGACACCCAGCTCCCACCACAAAGACTTAGG...CTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp CTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCCTGCCTCACTCCATCTaGTACTCCTGGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: LLPPSSGRCLLLVCGSSCLPHSI*YSWEHF
Trigger: GAAGTGTTCCCAGGAGTACCAGATGGAGTGAGGCAG...GCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp ACCCCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTGTGCTCCGAGCTCTCTaGGAATGTGGGGTAGAAGTA +
Preference number: 4 (lower is better)
Translates to: TPDPGPPPCKWQGGDVVAVLRAL*ECGVEV
Trigger: TACTTCTACCCCACATTCTCAGAGAGCTCGGAGCAC...AGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTGTGTGCTCCGAGCTCTCTaGGAATGTGGGGTAGAAGTA +
Preference number: 4 (lower is better)
Translates to: ALESRDRHSAQRNLTGACVLRAL*ECGVEV
Trigger: TACTTCTACCCCACATTCTCAGAGAGCTCGGAGCAC...ACAGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTGCGCATCCTGCGGCTTaGGCGGCTGTATGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: CGEATWRRAMASSSLKTLAHPAA*AAVCVL
Trigger: GAGCACACATACAGCCGCTCAAGCCGCAGGATGCGC...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp TTGGGGGCATCTAGGACTATGTTAGTGGGCTCTATTGGAGTTCTGGTGGGAGGGGCGCATCCTGCGGCTTaGGCGGCTGTATGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LGASRTMLVGSIGVLVGGAHPAA*AAVCVL
Trigger: GAGCACACATACAGCCGCTCAAGCCGCAGGATGCGC...CCCTCCCACCAGAACTCCAATAGAGCCCACTAACATAGTCCTAGATGCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp CTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTCGTCCCCGTCAGAGCTaGTGTCCAAGGGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LQESPLLPAWSLMEIAGVRPRQS*CPRVGA
Trigger: GGCCCCCACCCTTGGACATCAGCTCTGACGGGGACG...AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp TTGGGGGCATCTAGGACTATGTTAGTGGGCTCTATTGGAGTTCTGGTGGGAGGGCTGGGTACAGCTCCCTaGGCACCGTGGCATCCACGT +
Preference number: 4 (lower is better)
Translates to: LGASRTMLVGSIGVLVGGLGTAP*APWHPR
Trigger: ACGTGGATGCCACGGTGCTCAGGGAGCTGTACCCAG...CCCTCCCACCAGAACTCCAATAGAGCCCACTAACATAGTCCTAGATGCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp TGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGGTCAGGGCAGGCAGCTaGCCTTGGATGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WKSLGFLGQDLSQPFCSQVRAGS*PWMVQQ
Trigger: CTGCTGGACCATCCAAGGTCAGCTGCCTGCCCTGAC...CTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR TCA 90 bp CTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTTTTCTGCAGCCAGGCTaGCCCTACAAATCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LPWNREIGTAHNGTSLGPFLQPG*PYKSPS
Trigger: AGAAGGGGATTTGTAGGGTCAGCCTGGCTGCAGAAA...AGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CCATCCCCAGCTATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGTACCTGCGTGGTCTTTaGTGGAAATCGCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PSPAMSSHLEGQHQLRGLYLRGL*WKSLGF
Trigger: AAACCCCAGCGATTTCCATCAAAGACCACGCAGGTA...CAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATAGCTGGGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp AGTTTCTCTGTGCCCGGCTCAAGCATCCGTGTGCCCGCGGTTCTGAGAACGGCTGAGAACGGCTTCACATaGGACCCTCACCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: SFSVPGSSIRVPAVLRTAENGFT*DPHQED
Trigger: ATCTTCCTGGTGAGGGTCTCATGTGAAGCCGTTCTC...AGCCGTTCTCAGAACCGCGGGCACACGGATGCTTGAGCCGGGCACAGAGAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR TCA 90 bp GGGCAGCACATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGGTGGGAGGGAAATGTaGCAGAGGAAGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GQHMAGHHHCGSFCIHSQGGREM*QRKGPR
Trigger: CCTGGGCCCCTTCCTCTGTCACATTTCCCTCCCACC...CTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp GGTGTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTGGACACCATCACTGTGGGGAGAACCAGAAGGATaGGCCTATCTCGTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GVGWFRLGAAHGWTPSLWGEPEG*AYLVVF
Trigger: AAAGACCACGAGATAGGCTCATCCTTCTGGTTCTCC...CCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp CCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCTCATTCTTCAGGGCCTaGCTTGTTCACTTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PPSSGRCLLLVCGSSCWSSFFRA*LVHFEQ
Trigger: CTGCTCAAAGTGAACAAGTCAGGCCCTGAAGAATGA...GCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp GCTCTTGTGGACTATCACGATGGCGTCATCGCCAGCACGGTGACTCCCCTGAAGGAGGGATGCTACATGTaGGTGTGTGCCAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: ALVDYHDGVIASTVTPLKEGCYM*VCARGI
Trigger: GATACCCCTGGCACACACTCACATGTAGCATCCCTC...CTTCAGGGGAGTCACCGTGCTGGCGATGACGCCATCGTGATAGTCCACAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp GGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGGGTAGAAGTAGCTGGTaGGGTTGTATCGTGCTATCG +
Preference number: 4 (lower is better)
Translates to: GDASRDTAQRCLAATLCGGRSSW*GCIVLS
Trigger: CGATAGCACGATACAACCGCACCAGCTACTTCTACC...CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000562849.6
CDS-3UTR GCA 90 bp TATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGGCTCTGACCCAACGAGCAGATGGCTGTaGTCCGAGCTCTCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: YEQPPRRTAPAPGSGSDPTSRWL*SELSEN
Trigger: ATTCTCAGAGAGCTCGGAGCACAGCCATCTGCTCGT...TGGGTCAGAGCCAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CCAGCAGTTTCCAGAGGCAGAATAGAATTTGGGCGCAGCTTGCTGGGCGAGGGTAGTCCTCTGAGGAGCTaGAGGCATAGCGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: PAVSRGRIEFGRSLLGEGSPLRS*RHSASC
Trigger: GCAGGATGCGCTATGCCTGCAGCTCCTCAGAGGACT...ACCCTCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCTCTGGAAACTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR GCA 90 bp CGTTCCGTGAAACCTTTGCAGGTGGGTTTTGTGTTTGTGGTAGGCCTGTATGTGGGGGTCCTCTGCTCCTaGTGGTGTCGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSVKPLQVGFVFVVGLYVGVLCS*WCRPGL
Trigger: CAGCCCTGGCCGACACCAGCAGGAGCAGAGGACCCC...CACATACAGGCCTACCACAAACACAAAACCCACCTGCAAAGGTTTCACGGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR GCA 90 bp TGTGCACGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGTCTGACCCATTCGCGTaGAGGCCACAGTGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: CARLCVPKECGSACRDQQSDPFA*RPQWSA
Trigger: GGCCGACCACTGTGGCCTGCACGCGAATGGGTCAGA...CTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCGTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTAGTCCTGGGCAGTGGTCAGAGATGCTTGGCTaGCACCCTCTGTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WRRAMASSSLKTLSPGQWSEMLG*HPLWAG
Trigger: CCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGA...CCACTGCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTAGTCCTGGGCAGTGGGGGGCTCCAGGAGGCTaGACGCAGGATGCTACAGAA +
Preference number: 4 (lower is better)
Translates to: WRRAMASSSLKTLSPGQWGAPGG*TQDATE
Trigger: TTCTGTAGCATCCTGCGTGCAGCCTCCTGGAGCCCC...CCACTGCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCTACAAGCCATCAGGGTaGTACAAGCCAACTCCTGTT +
Preference number: 4 (lower is better)
Translates to: RPLLGDACCLCVAAAAGAYKPSG*YKPTPV
Trigger: AACAGGAGTTGGCTTGTAGCACCCTGATGGCTTGTA...GGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp GCATGTCGTGGATGGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCCTGGGCGATGCCTGTTaGTTGTGTGTGGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ACRGWRSRKSQERDSPKGLGDAC*LCVAAA
Trigger: AGCTGCTGCCACACACAAGCAACAGGCATCGCCCAG...GCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTCCAGCAGGACCCGGCTaGCTGGGTCCCTCACACAAT +
Preference number: 4 (lower is better)
Translates to: CGEATWRRAMASSSLKTLPAGPG*LGPSHN
Trigger: ATTGTGTGAGGGACCCAGCCAGCCGGGTCCTGCTGG...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GGCAGAGTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGAGGGTGGTGATGTTGTaGCTCATCTGCCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: GRVMAAGDASRDTAQRCLRVVML*LICPGI
Trigger: GATTCCAGGGCAGATGAGCCACAACATCACCACCCT...CAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCACTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGGTCCAGCAGTTTCCAGAGGCAGAATAGAATTTGGGCGCAGCTTGCTGGGCGACTGCTCAGAGATGCTTaGCTGCCACCCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: WSSSFQRQNRIWAQLAGRLLRDA*LPPSVG
Trigger: GCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAG...TCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCTCTGGAAACTGCTGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCCACCTTCCATCTCCTTaGGCCTCTGATGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCHLPSP*ASDEPR
Trigger: CCTGGGCTCATCAGAGGCCCAAGGAGATGGAAGGTG...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCCTCATGCCAAGAGCCTaGACATGCAGGTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCLMPRA*TCRWAW
Trigger: CCATGCCCACCTGCATGTCCAGGCTCTTGGCATGAG...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 72 bp CGTGACAGTCCCAAAGGCCTGTGGGATCCTAAGTCTTaGTGGTGGGAGCTGGGTGTCGGTGTGGGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: RDSPKGLWDPKS*WWELGVGVGWF
Trigger: AAACCACCCCACACCGACACCCAGCTCCCACCACAAAGACTTAGGATCCCACAGGCCTTTGGGACTGTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGTCCATGGAGACCGTGTaGAGGCCACCTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKSMETV*RPPWAG
Trigger: CCCGGCCCAAGGTGGCCTTCACACGGTCTCCATGGA...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp TGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGCTAGCACCACCTGACTaGGGGACTGAGGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: WKSLGFLGQDLSQPFCSQLAPPD*GTEGTG
Trigger: CCCAGTACCCTCAGTCCCTCAGTCAGGTGGTGCTAG...CTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp TGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTAGTCCTGGGCAGTGGCTGTGGCAGCAAGGCTaGGTAGCCTTCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: WRRAMASSSLKTLSPGQWLWQQG*VAFWSS
Trigger: AGAGGACCAGAAGGCTACTCAGCCTTGCTGCCACAG...CCACTGCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GCATGTCGTGGATGGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCTGGGCTTGGCCAGTGTaGCAATGGATGTTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: ACRGWRSRKSQERDSPKGWAWPV*QWMFLV
Trigger: CACGAGGAACATCCATTGTCACACTGGCCAAGCCCA...GCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp TTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGTGCCTGAGTCGGAGGTaGCATCCAGCGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LMEIAGVSWSRSEPAFLQCLSRR*HPAWGR
Trigger: CCTGCCCCACGCTGGATGGCACCTCCGACTCAGGCA...CTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp GCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGGCATCTACCTGGGGCCTaGAGCGTCAGAGATAGCTCT +
Preference number: 4 (lower is better)
Translates to: AFVCLKNVVQPVGTSRTRHLPGA*SVRDSS
Trigger: AGAGCTATCTCTGACGCTGCAGGCCCCAGGTAGATG...CCGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGCATCTACCTGGGGCCTaGAGCGTCAGAGATAGCTCT +
Preference number: 4 (lower is better)
Translates to: RLCVPKECGSACRDQQDPHLPGA*SVRDSS
Trigger: AGAGCTATCTCTGACGCTGCAGGCCCCAGGTAGATG...CGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCAGTGGCACTGGAGTATaGAACACCAAGTGTGTACGT +
Preference number: 4 (lower is better)
Translates to: LLPPSSGRCLLLVCGSSCSGTGV*NTKCVR
Trigger: ACGTACACACTTGGTGTTGCATACTCCAGTGCCACT...GCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGGCTGACCTCCTCGTAGCCTGGTaGAGAATCTGGGTACAGCTC +
Preference number: 4 (lower is better)
Translates to: SLGFLGQDLSQPFCSQADLLVAW*RIWVQL
Trigger: GAGCTGTACCCAGATTCTCCACCAGGCTACGAGGAG...GTCAGCCTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GGCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCTCCTCGTAGCCTGGTaGAGAATCTGGGTACAGCTC +
Preference number: 4 (lower is better)
Translates to: GCTQDATELLGGFLSAPHLLVAW*RIWVQL
Trigger: GAGCTGTACCCAGATTCTCCACCAGGCTACGAGGAG...GTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGGTGTGGTGAAGCCACCTaGAGAAGGGCAATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AFVCLKNVVQPVGTSRTRCGEAT*RRAMAS
Trigger: TGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA...CCGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGCTGCTCAGAGATGCTTaGCTGCCACCCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: WKSLGFLGQDLSQPFCSQLLRDA*LPPSVG
Trigger: GCCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAG...CTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp ACCCCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTAGGACATGTAATCCTTaGAGCAGAACAGCGGAGCCA +
Preference number: 4 (lower is better)
Translates to: TPDPGPPPCKWQGGDVVARTCNP*SRTAEP
Trigger: TGGCTCCGCTGTTCTGCTCCAAGGATTACATGTCCT...AGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536005.7
CDS-3UTR CCA 90 bp CCCTTAGTCCTGGGCAGTGGCTGGACTGATGAGGGAACCGCCGCTGCACACCCAATGCTACAGAACTTCTaGGTGGATTCCTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PLVLGSGWTDEGTAAAHPMLQNF*VDSFQL
Trigger: GAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCAT...TGGGTGTGCAGCGGCGGTTCCCTCATCAGTCCAGCCACTGCCCAGGACTAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GCTCTTGTGGACTATCACGATGGCGTCATCGCCAGCACGGTGACTCCCCTGAAGGATCCTAAGTCTTTGTaGTGGGAGCTGGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: ALVDYHDGVIASTVTPLKDPKSL*WELGVG
Trigger: ACCGACACCCAGCTCCCACCACAAAGACTTAGGATC...CTTCAGGGGAGTCACCGTGCTGGCGATGACGCCATCGTGATAGTCCACAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp GCTCTTGTGGACTATCACGATGGCGTCATCGCCAGCACGGTGACTCCCCTGAAGAGGGCATGTCGTGGATaGAGGAGCAGGAAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: ALVDYHDGVIASTVTPLKRACRG*RSRKSQ
Trigger: TTGGCTTTTCCTGCTCCTCCATCCACGACATGCCCT...CTTCAGGGGAGTCACCGTGCTGGCGATGACGCCATCGTGATAGTCCACAAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp GCATGTCGTGGATGGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCGTATCTCTAGGAACTTaGGAGGGGCCCCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ACRGWRSRKSQERDSPKGVSLGT*EGPQCV
Trigger: CACACACTGGGGCCCCTCCCAAGTTCCTAGAGATAC...GCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGGCGCATCCTGCGGCTTaGGCGGCTGTATGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKAHPAA*AAVCVL
Trigger: GAGCACACATACAGCCGCTCAAGCCGCAGGATGCGC...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp AGTTTCATTGCCACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTGCTATGGGGGCCAGTCCTCTaGGGAGCTGCAGGCATAGCG +
Preference number: 4 (lower is better)
Translates to: SFIATFLSFLVVQAIRVLWGPVL*GAAGIA
Trigger: CGCTATGCCTGCAGCTCCTCAGAGGACTGGCCCCCA...TAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTGGCAATGAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp AGAAAACAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCCCTCCCCGTCCCCGTCAGAGCTaGTGTCCAAGGGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RKQYTTKVVRTACKQVPPRPRQS*CPRVGA
Trigger: GGCCCCCACCCTTGGACATCAGCTCTGACGGGGACG...GGGAGGGACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTGTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CGTTCCGTGAAACCTTTGCAGGTGGGTTTTGTGTTTGTGGTAGGCCTGTATGTGCTGGGTACAGCTCCCTaGGCACCGTGGCATCCACGT +
Preference number: 4 (lower is better)
Translates to: RSVKPLQVGFVFVVGLYVLGTAP*APWHPR
Trigger: ACGTGGATGCCACGGTGCTCAGGGAGCTGTACCCAG...CACATACAGGCCTACCACAAACACAAAACCCACCTGCAAAGGTTTCACGGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR TCA 90 bp CAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCCCTCCCCCAGATGTCAGGGCAGGCAGCTaGCCTTGGATGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QYTTKVVRTACKQVPPPDVRAGS*PWMVQQ
Trigger: CTGCTGGACCATCCAAGGTCAGCTGCCTGCCCTGAC...ATCTGGGGGAGGGACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536005.7
CDS-3UTR TCA 90 bp TGTGCACGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGCTGTGGCAGCAAGGCTaGGTAGCCTTCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: CARLCVPKECGSACRDQQLWQQG*VAFWSS
Trigger: AGAGGACCAGAAGGCTACTCAGCCTTGCTGCCACAG...CTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCGTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTCCTCGTGGTGGCTGTaGACAGCCTTACTCTGTATC +
Preference number: 4 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCSSWWL*TALLCI
Trigger: GATACAGAGTAAGGCTGTTCACAGCCACCACGAGGA...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp ACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGAGGCATAGCGCATCCTaGGGCTTGAGCGGCTGTATG +
Preference number: 4 (lower is better)
Translates to: TSSDDEAYCLSTAHAKSLRHSAS*GLSGCM
Trigger: CATACAGCCGCTCAAGCCGCAGGATGCGCTATGCCT...CAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp CAGGTGGGTTTTGTGTTTGTGGTAGGCCTGTATGTGCGCATATTCACACATATGGGGGTCCTCTGCTCCTaGTGGTGTCGGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QVGFVFVVGLYVRIFTHMGVLCS*WCRPGL
Trigger: CAGCCCTGGCCGACACCAGCAGGAGCAGAGGACCCC...CATATGTGTGAATATGCGCACATACAGGCCTACCACAAACACAAAACCCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR GCA 90 bp CAGGTGGGTTTTGTGTTTGTGGTAGGCCTGTATGTGCGCATATTCACACATATGTGGGCCGGGGTCCTCTaGTCCTGCTGGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: QVGFVFVVGLYVRIFTHMWAGVL*SCWCRP
Trigger: TGGCCGACACCAGCAGGAGCAGAGGACCCCGGCCCA...CATATGTGTGAATATGCGCACATACAGGCCTACCACAAACACAAAACCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR GCA 90 bp AACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCTACATGGGCCGGGGTCCTCTaGTCCTGCTGGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: NFWVDSFQLRTRRNAISTWAGVL*SCWCRP
Trigger: TGGCCGACACCAGCAGGAGCAGAGGACCCCGGCCCA...TGTAGAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp GGCAGAGTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGTGCACGCCTTTGTGTaGCTAAAGAATGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: GRVMAAGDASRDTAQRCLVHAFV*LKNVVQ
Trigger: CTGAACCACATTCTTTAGGCACACAAAGGCGTGCAC...CAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCACTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGGCTCTGACCCAGTTATGAGTCACGTGTaGATCTCTGTGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: YEQPPRRTAPAPGSGSDPVMSHV*ISVCVC
Trigger: GCACACACACACAGAGATGCACACGTGACTCATAAC...TGGGTCAGAGCCAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTCCTTCATTTTGTCTCTaGAAACACCCACGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LPWNREIGTAHNGTSLGPPSFCL*KHPRGQ
Trigger: TTGCCCACGTGGGTGTTTGCAGAGACAAAATGAAGG...AGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCATGACGGGTTTTGTCTaGAATTATGAGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLPPSSGRCLLLVCGSSCMTGFV*NYECWW
Trigger: CCACCAGCACTCATAATTGCAGACAAAACCCGTCAT...GCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp GCTCTTGTGGACTATCACGATGGCGTCATCGCCAGCACGGTGACTCCCCTGAAGCCTCACTGGCTTCCTTaGCTTTCTTGTTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ALVDYHDGVIASTVTPLKPHWLP*LSCFLP
Trigger: AGGCAGGAAACAAGAAAGGCAAGGAAGCCAGTGAGG...CTTCAGGGGAGTCACCGTGCTGGCGATGACGCCATCGTGATAGTCCACAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp ACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGGTGTGTGGCAGCAGCTaGTGGAGCCCTTTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TSSDDEAYCLSTAHAKSLVCGSS*WSPLQR
Trigger: TCTCTGCAAAGGGCTCCAGCAGCTGCTGCCACACAC...CAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGGCTGACACACTCCTCGTAGCCTaGTGGAGAATCTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: SLGFLGQDLSQPFCSQADTLLVA*WRIWVQ
Trigger: CTGTACCCAGATTCTCCACCAGGCTACGAGGAGTGT...GTCAGCCTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGTCCTCTGCTCCTGCTaGTGTCGGCCAGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LLPAWSLMEIAGVSWSRSVLCSC*CRPGLW
Trigger: CCACAGCCCTGGCCGACACCAGCAGGAGCAGAGGAC...AGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGGTGGCTCATCTGCCCTaGAATCGAGAGATAGGCACA +
Preference number: 4 (lower is better)
Translates to: RLCVPKECGSACRDQQDPVAHLP*NREIGT
Trigger: TGTGCCTATCTCTCGATTCCAGGGCAGATGAGCCAC...CGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CGTTCCGTGAAACCTTTGCAGGTGGGTTTTGTGTTTGTGGTAGGCCTGTATGTGCCCTGCCCATCTACCTaGGGCCTGCAGCGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RSVKPLQVGFVFVVGLYVPCPST*GLQRQR
Trigger: TCTCTGACGCTGCAGGCCCCAGGTAGATGGGCAGGG...CACATACAGGCCTACCACAAACACAAAACCCACCTGCAAAGGTTTCACGGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp CAGGTGGGTTTTGTGTTTGTGGTAGGCCTGTATGTGCGCATATTCACACATATGGCGTGCAGGCCACAGTaGTCGGCCAGGCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: QVGFVFVVGLYVRIFTHMACRPQ*SARQGL
Trigger: CAGTCCCTGCCTGGCCGACCACTGTGGCCTGCACGC...CATATGTGTGAATATGCGCACATACAGGCCTACCACAAACACAAAACCCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp AACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCTACAGCGTGCAGGCCACAGTaGTCGGCCAGGCAGGGACTG +
Preference number: 4 (lower is better)
Translates to: NFWVDSFQLRTRRNAISTACRPQ*SARQGL
Trigger: CAGTCCCTGCCTGGCCGACCACTGTGGCCTGCACGC...TGTAGAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCACCTTGTAAGTACACCACTAAGGTaGTCAGAACTGCTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: VRASSLRLRPQTQVPHLVSTPLR*SELLVN
Trigger: GTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACT...TACAAGGTGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GTGGGGTGGTTTCGGTTGGGGGCAGCACATGGCTGGACACCATCACTGTGGAAGCTATTGGAGTTCTGGTaGGAGGGAAATGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: VGWFRLGAAHGWTPSLWKLLEFW*EGNVTE
Trigger: CTCTGTCACATTTCCCTCCCACCAGAACTCCAATAG...CTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCCCCAACCGAAACCACCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TCACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGTCCAGCAGGGACGTaGGCTGGAGAACCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SLPQTMKLTVSPPLMPRACPAGT*AGEPEG
Trigger: TCCTTCTGGTTCTCCAGCCCACGTCCCTGCTGGACA...GGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp CATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGAGGTGGAGTTCACTTTGAGCAGTaGCAGCAGCGAGCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: HGWTPSLWKFLHSFPGGGVHFEQ*QQRAGR
Trigger: CCTGCCGGCTCGCTGCTGCCACTGCTCAAAGTGAAC...TCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TCACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCGGGGCAGCACATGGCTaGACACCATCACTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLPQTMKLTVSPPLMPRAGAAHG*TPSLWK
Trigger: CTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCCC...GGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGCCAGAGGAGCCCATTTaGCCTCCACAAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQPEEPI*PPQGAG
Trigger: TCCTGCCCCTTGTGGAGGCCAAATGGGCTCCTCTGG...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp TGGTCCAGCAGTTTCCAGAGGCAGAATAGAATTTGGGCGCAGCTTGCTGGGCGAGTGCTCCGAGCTCTCTaGGAATGTGGGGTAGAAGTA +
Preference number: 4 (lower is better)
Translates to: WSSSFQRQNRIWAQLAGRVLRAL*ECGVEV
Trigger: TACTTCTACCCCACATTCTCAGAGAGCTCGGAGCAC...TCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCTCTGGAAACTGCTGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR TCA 90 bp CAGAAGCAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGCGGTGGCGGTGCCGCTaGAGCCGGGCCTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QKQDVFLKRVSFLDCILKRWRCR*SRACLS
Trigger: GGACAGGCAGGCCCGGCTTCAGCGGCACCGCCACCG...CTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp ACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCGCGCATCCTGCGGCTTaGGCGGCTGTATGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TELLGGFLSAPHQKKCYLAHPAA*AAVCVL
Trigger: GAGCACACATACAGCCGCTCAAGCCGCAGGATGCGC...GAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp TGTGCACGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGAGCTCCACGTTCCGTaGAACCTTTGCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: CARLCVPKECGSACRDQQELHVP*NLCRWV
Trigger: AACCCACCTGCAAAGGTTTCACGGAACGTGGAGCTC...CTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCGTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR TCA 90 bp AACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCTACACCTCCAGTTTGCGCCTaGGACCCCAGACCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: NFWVDSFQLRTRRNAISTPPVCA*DPRPRS
Trigger: GGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGG...TGTAGAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGCTAGCACCACCTGACTaGGGGACTGAGGGTACTGGG +
Preference number: 4 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKLAPPD*GTEGTG
Trigger: CCCAGTACCCTCAGTCCCTCAGTCAGGTGGTGCTAG...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTCAGGCAGCACTGTGGTaGAGCCACCTGGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LLPAWSLMEIAGVSWSRSQAALW*SHLEKG
Trigger: GCCCTTCTCCAGGTGGCTTCACCACAGTGCTGCCTG...AGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCGAGTAGGGTGGTGGTaGGTCCGTGGGGACATACAG +
Preference number: 4 (lower is better)
Translates to: LMEIAGVSWSRSEPAFLQRVGWW*VRGDIQ
Trigger: CTGTATGTCCCCACGGACGCACCACCACCCTACTCG...CTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTTCTGACCCATTCGCGTaGAGGCCACAGTGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LLPAWSLMEIAGVSWSRSSDPFA*RPQWSA
Trigger: GGCCGACCACTGTGGCCTGCACGCGAATGGGTCAGA...AGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGGGGGCTCCAGGAGGCTaGACGCAGGATGCTACAGAA +
Preference number: 4 (lower is better)
Translates to: LMEIAGVSWSRSEPAFLQGAPGG*TQDATE
Trigger: TTCTGTAGCATCCTGCGTGCAGCCTCCTGGAGCCCC...CTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTAGCACTCTCTGGAATTaGAGAAGCAGGATGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LPWNREIGTAHNGTSLGPSTLWN*RSRMCF
Trigger: GAAACACATCCTGCTTCTGCAATTCCAGAGAGTGCT...AGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGTGGCTCATCTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCAGCTCTCTGAGAATGTaGGGTAGAAGTAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CGSSALESRDRHSAQRNLSSLRM*GRSSWC
Trigger: GCACCAGCTACTTCTACCCCACATTCTCAGAGAGCT...GAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAGATGAGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGAGCTCTCTGAGAATGTaGGGTAGAAGTAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RLCVPKECGSACRDQQDPSSLRM*GRSSWC
Trigger: GCACCAGCTACTTCTACCCCACATTCTCAGAGAGCT...CGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCAGCGAGTAGGGTGGTaGTGCGTCCGTGGGGACATA +
Preference number: 4 (lower is better)
Translates to: LMEIAGVSWSRSEPAFLQQRVGW*CVRGDI
Trigger: TATGTCCCCACGGACGCACCACCACCCTACTCGCTG...CTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CATCTCTGTGTGTGTGTGCACGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGGGGAAGGGTGTCCATaGAGACCGTGTGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: HLCVCVHAFVCLKNVVQPGEGCP*RPCEGH
Trigger: GTGGCCTTCACACGGTCTCCATGGACACCCTTCCCC...AGGCTGAACCACATTCTTTAGGCACACAAAGGCGTGCACACACACACAGAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCCCTCCCCCAGATGGGGAAGGGTGTCCATaGAGACCGTGTGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: QYTTKVVRTACKQVPPPDGEGCP*RPCEGH
Trigger: GTGGCCTTCACACGGTCTCCATGGACACCCTTCCCC...ATCTGGGGGAGGGACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTCAGGACCCGGCTGGCTaGGTCCCTCACACAATCCTC +
Preference number: 4 (lower is better)
Translates to: LLPAWSLMEIAGVSWSRSQDPAG*VPHTIL
Trigger: GAGGATTGTGTGAGGGACCCAGCCAGCCGGGTCCTG...AGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTTTGGGCGCAGCTTGCTaGGCGAGGGTAGGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: LLPAWSLMEIAGVSWSRSLGAAC*ARVGAN
Trigger: GTTTGCCCCTACCCTCGCCCAGCAAGCTGCGCCCAA...AGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp TGGTCCAGCAGTTTCCAGAGGCAGAATAGAATTTGGGCGCAGCTTGCTGGGCGAAGGCAGAATAGAATTTaGGCGCAGCTTGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: WSSSFQRQNRIWAQLAGRRQNRI*AQLAGR
Trigger: TCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCT...TCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCTCTGGAAACTGCTGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp TGTGCACGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGCCCCCACCTTGTAAGTaGCAGGGTGGTGATGTTGTG +
Preference number: 4 (lower is better)
Translates to: CARLCVPKECGSACRDQQPPPCK*QGGDVV
Trigger: CACAACATCACCACCCTGCCACTTACAAGGTGGGGG...CTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCGTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTGTGCAAGGTGGTATTTATaGGGAGCATATCCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: ALESRDRHSAQRNLTGACARWYL*GAYPLH
Trigger: ATGAAGGGGATATGCTCCCCATAAATACCACCTTGC...ACAGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTGTCTTCTGGTCCTCTTGTaGTGGCAAGGTGGTATTTAT +
Preference number: 4 (lower is better)
Translates to: ALESRDRHSAQRNLTGACLLVLL*WQGGIY
Trigger: ATAAATACCACCTTGCCACCACAAGAGGACCAGAAG...ACAGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCTTTGATGGAAATCGCTaGGGTTTCTTGGTCAAGATC +
Preference number: 4 (lower is better)
Translates to: VMAAGDASRDTAQRCLAAFDGNR*GFLVKI
Trigger: GATCTTGACCAAGAAACCCCAGCGATTTCCATCAAA...GGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CCATCCCCAGCTATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGAGTACACCACTAAGGTaGTCAGAACTGCTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: PSPAMSSHLEGQHQLRGLSTPLR*SELLVN
Trigger: GTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACT...CAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATAGCTGGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGTTCATTCCCAGGAGGTaGAGCCCCAGAGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQFIPRR*SPRALR
Trigger: CCTCAGTGCTCTGGGGCTCCACCTCCTGGGAATGAA...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TCACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGTGGACTATCACGATaGCGTCATCGCCAGCACGGT +
Preference number: 4 (lower is better)
Translates to: SLPQTMKLTVSPPLMPRACGLSR*RHRQHG
Trigger: ACCGTGCTGGCGATGACGCCATCGTGATAGTCCACA...GGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TTGGGGGCATCTAGGACTATGTTAGTGGGCTCTATTGGAGTTCTGGTGGGAGGGCCCTTTGCAGAGACCTaGGACCTCACCACACCCATA +
Preference number: 4 (lower is better)
Translates to: LGASRTMLVGSIGVLVGGPFAET*DLTTPI
Trigger: TATGGGTGTGGTGAGGTCCCAGGTCTCTGCAAAGGG...CCCTCCCACCAGAACTCCAATAGAGCCCACTAACATAGTCCTAGATGCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TGGATAGGAACAGCTGAGTGGGAGTGTCAGTGGCACTGGAGTATGCAACACCAACCTTCCGCCCTCTTCTaGGCGATGCCTGTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: WIGTAEWECQWHWSMQHQPSALF*AMPVAC
Trigger: ACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGG...TTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGGATGGCCCATCCTCATaGCGTTACACCAGCCATGTC +
Preference number: 4 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQDGPSS*RYTSHV
Trigger: GACATGGCTGGTGTAACGTCATGAGGATGGGCCATC...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp TTGCCACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTGCTACAAGCCACTGACTTGTTCACTTTaGGCAGTGGCAGCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: LPLSSLSWWYKPSGCYKPLTCSL*AVAAAS
Trigger: GCTCGCTGCTGCCACTGCTCAAAGTGAACAAGTCAG...TGGCTTGTAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp GGGCAGCACATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGTCTCCATCGTCCTGTaGTGCAGCTTCACCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GQHMAGHHHCGSFCIHSQVSIVL*CSFTFH
Trigger: ATGGAAGGTGAAGCTGCATCACAGGACGATGGAGAC...CTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp TGGATAGGAACAGCTGAGTGGGAGTGTCAGTGGCACTGGAGTATGCAACACCAACACAGGAGGTGGAGCTaGGGGATGCTACATGTGAGT +
Preference number: 4 (lower is better)
Translates to: WIGTAEWECQWHWSMQHQHRRWS*GMLHVS
Trigger: ACTCACATGTAGCATCCCTCAGCTCCACCTCCTGTG...TTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGAGTCCTCTGAGGAGCTaGAGGCATAGCGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKSPLRS*RHSASC
Trigger: GCAGGATGCGCTATGCCTGCAGCTCCTCAGAGGACT...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp GCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGGGTTATGAGTCACGTGTaGATCTCTGTGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: AFVCLKNVVQPVGTSRTRVMSHV*ISVCVC
Trigger: GCACACACACACAGAGATGCACACGTGACTCATAAC...CCGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTGCTACAAGCCAACTCTCTCTCCACCGCTCATaGCAAGAGCCTGGACATGCA +
Preference number: 4 (lower is better)
Translates to: HFPLFPGGTSHQGATSQLSLHRS*QEPGHA
Trigger: TGCATGTCCAGGCTCTTGGCATGAGCGGTGGAGAGA...GAGTTGGCTTGTAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp ACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCGGGGACACGAGCAGATaGCTGTGCTCCGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TELLGGFLSAPHQKKCYLGDTSR*LCSELS
Trigger: AGAGAGCTCGGAGCACAGCCATCTGCTCGTGTCCCC...GAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CAGAAGCAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGGGAGCCCCTTGGCCCTaGGTCTGGGCCCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: QKQDVFLKRVSFLDCILKGAPWP*VWARQW
Trigger: CCACTGCCGGGCCCAGACCCAGGGCCAAGGGGCTCC...CTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTCTGCAAACACCCACGTaGGCAAGGCCAGAACACAGC +
Preference number: 4 (lower is better)
Translates to: LQESPLLPAWSLMEIAGVLQTPT*ARPEHS
Trigger: GCTGTGTTCTGGCCTTGCCCACGTGGGTGTTTGCAG...AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATGCAAGGTGGTATTTATaGGGAGCATATCCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHARWYL*GAYPLH
Trigger: ATGAAGGGGATATGCTCCCCATAAATACCACCTTGC...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGATCGCTGGGGTTTCTTaGTCAAGATCTGAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: WKSLGFLGQDLSQPFCSQIAGVS*SRSEPA
Trigger: GGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGAT...CTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGGCCTCTGTTACCTGCGTaGTCTTTGATGGAAATCGCT +
Preference number: 4 (lower is better)
Translates to: AFVCLKNVVQPVGTSRTRPLLPA*SLMEIA
Trigger: AGCGATTTCCATCAAAGACCACGCAGGTAACAGAGG...CCGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGGTACAGAACTTCTGGGTaGATTCCTTTCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: AFVCLKNVVQPVGTSRTRYRTSG*IPFSSA
Trigger: TGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTA...CCGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGTGGCTCATCTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCTACAGAACTTCTGGGTaGATTCCTTTCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: CGSSALESRDRHSAQRNLYRTSG*IPFSSA
Trigger: TGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTA...GAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAGATGAGCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp ACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGAGTGAGACCCTGTCCTaGTGGAGAATCTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: TSSDDEAYCLSTAHAKSLSETLS*WRIWVQ
Trigger: CTGTACCCAGATTCTCCACCAGGACAGGGTCTCACT...CAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TGCTTAATCTTGAGAGGTAATGAATGGGTAGAGATTGCTAGCCGGAGGTGTATTCCTCATCCCAGGGTCTaGCCCTGGGGCCCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: CLILRGNEWVEIASRRCIPHPRV*PWGPCL
Trigger: GAGACAGGGGCCCCAGGGCCAGACCCTGGGATGAGG...AATACACCTCCGGCTAGCAATCTCTACCCATTCATTACCTCTCAAGATTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 72 bp TCTGTGGCAGCAAGGCTGAGTAGCCTTCTGGTCCTCTaGTGGTGGCAAGGTGGTATTTATGGGGAGCATATC +
Preference number: 4 (lower is better)
Translates to: SVAARLSSLLVL*WWQGGIYGEHI
Trigger: GATATGCTCCCCATAAATACCACCTTGCCACCACAAGAGGACCAGAAGGCTACTCAGCCTTGCTGCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp GCTGCACGCAGGATGCTACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCTCTATGTGTGTGTTATaGGTCACGTGTGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: AARRMLQNFWVDSFQLRTSMCVL*VTCASL
Trigger: CAGAGATGCACACGTGACTCATAACACACACATAGA...GGTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGTCTATGTGTGTGTTATaGGTCACGTGTGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: RLCVPKECGSACRDQQDPSMCVL*VTCASL
Trigger: CAGAGATGCACACGTGACTCATAACACACACATAGA...CGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGGAGCTCCACGTTCCGTaGAACCTTTGCAGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKELHVP*NLCRWV
Trigger: AACCCACCTGCAAAGGTTTCACGGAACGTGGAGCTC...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR TCA 90 bp CATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGAGGTGGATACACGGGGACCCAATaGTGGCTCTTGTGGACTATC +
Preference number: 4 (lower is better)
Translates to: HGWTPSLWKFLHSFPGGGYTGTQ*WLLWTI
Trigger: GATAGTCCACAAGAGCCATCATTGGGTCCCCGTGTA...TCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGATGGATAGGAACAGCTaGGTGGGAGTGTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQMDRNS*VGVSVA
Trigger: TGCCACTGACACTCCCACTCAGCTGTTCCTATCCAT...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp TTGGGGGCATCTAGGACTATGTTAGTGGGCTCTATTGGAGTTCTGGTGGGAGGGCACTTCCTCAGACGATaGAGCTTACTGTCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LGASRTMLVGSIGVLVGGHFLRR*SLLSLH
Trigger: GTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGTG...CCCTCCCACCAGAACTCCAATAGAGCCCACTAACATAGTCCTAGATGCCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp AGTTTCATTGCCACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTGCTAAGTCCTCTGAGGAGCTaGAGGCATAGCGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: SFIATFLSFLVVQAIRVLSPLRS*RHSASC
Trigger: GCAGGATGCGCTATGCCTGCAGCTCCTCAGAGGACT...TAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTGGCAATGAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGCATCTACCTGGGGCCTaGAGCGTCAGAGATAGCTCT +
Preference number: 4 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKHLPGA*SVRDSS
Trigger: AGAGCTATCTCTGACGCTGCAGGCCCCAGGTAGATG...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TGCCTAGAAAACAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCCTCTGACCCATTCGCGTaGAGGCCACAGTGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: CLENSTPLRWSELLVNKSSDPFA*RPQWSA
Trigger: GGCCGACCACTGTGGCCTGCACGCGAATGGGTCAGA...GGACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTGTTTTCTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp AGAAAACAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCCCTCCCTCAGAGATGCTTGGCTaGCACCCTCTGTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RKQYTTKVVRTACKQVPPSEMLG*HPLWAG
Trigger: CCCAGCCCACAGAGGGTGGCAGCCAAGCATCTCTGA...GGGAGGGACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTGTTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTGGTAGAAGTAGCTGGTaGGGTTGTATCGTGCTAAGG +
Preference number: 4 (lower is better)
Translates to: CGEATWRRAMASSSLKTLGRSSW*GCIVLR
Trigger: CCTTAGCACGATACAACCGCACCAGCTACTTCTACC...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536005.7
CDS-3UTR GCA 90 bp CTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTAGGCTGCACGCAGGATaGTACAGAACTTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LQESPLLPAWSLMEIAGVRLHAG*YRTSGW
Trigger: CCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGCCT...AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TTGGGGGCATCTAGGACTATGTTAGTGGGCTCTATTGGAGTTCTGGTGGGAGGGGTGGCACCAGAGCCATaGCTAGTGATGTTCAGAACA +
Preference number: 4 (lower is better)
Translates to: LGASRTMLVGSIGVLVGGVAPEP*LVMFRT
Trigger: TGTTCTGAACATCACTAGGCATGGCTCTGGTGCCAC...CCCTCCCACCAGAACTCCAATAGAGCCCACTAACATAGTCCTAGATGCCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TGTGCACGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGTGGGGTAGAAGTAGCTaGTGCGGTTGTATCGTGCTA +
Preference number: 4 (lower is better)
Translates to: CARLCVPKECGSACRDQQWGRSS*CGCIVL
Trigger: TAGCACGATACAACCGCACCAGCTACTTCTACCCCA...CTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGCGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TATGAGCAGCCACCTAGAAGGACAGCACCAGCTCCGGGGTCTGGCTCTGACCCAATATTCACACATATGTaGAGCACGTCTAGATCTGTG +
Preference number: 4 (lower is better)
Translates to: YEQPPRRTAPAPGSGSDPIFTHM*STSRSV
Trigger: CACAGATCTAGACGTGCTCCACATATGTGTGAATAT...TGGGTCAGAGCCAGACCCCGGAGCTGGTGCTGTCCTTCTAGGTGGCTGCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTGTGGTGAAGCCACCTaGAGAAGGGCAATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LQESPLLPAWSLMEIAGVCGEAT*RRAMAS
Trigger: TGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA...AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTAGGGACCAGCAGGACCCGGCTTCTGGTCCTCTTGTaGTGGCAAGGTGGTATTTAT +
Preference number: 4 (lower is better)
Translates to: AFVCLKNVVQPVGTSRTRLLVLL*WQGGIY
Trigger: ATAAATACCACCTTGCCACCACAAGAGGACCAGAAG...CCGGGTCCTGCTGGTCCCTACAGGCTGAACCACATTCTTTAGGCACACAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATTTTGATGGAAATCGCTaGGGTTTCTTGGTCAAGATC +
Preference number: 4 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHFDGNR*GFLVKI
Trigger: GATCTTGACCAAGAAACCCCAGCGATTTCCATCAAA...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp ACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCCCACCCTCTGTGGGCTaGGTCTTCAGGAATCACCTC +
Preference number: 4 (lower is better)
Translates to: TELLGGFLSAPHQKKCYLPPSVG*VFRNHL
Trigger: GAGGTGATTCCTGAAGACCCAGCCCACAGAGGGTGG...GAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TTCACCAGCCTTTTCTCTGAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTTCTTTGCTGATGGCCTaGACCAGTGAGAACTCAGAC +
Preference number: 4 (lower is better)
Translates to: FTSLFSELCLLWVLASFSSLLMA*TSENSD
Trigger: GTCTGAGTTCTCACTGGTCCAGGCCATCAGCAAAGA...AGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTCAGAGAAAAGGCTGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CCA 90 bp GCATGTCGTGGATGGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCTTGAGAGGTAATGAATaGGTAGAGATTGCTAGCCGG +
Preference number: 4 (lower is better)
Translates to: ACRGWRSRKSQERDSPKGLRGNE*VEIASR
Trigger: CCGGCTAGCAATCTCTACCCATTCATTACCTCTCAA...GCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TTGGGGGCATCTAGGACTATGTTAGTGGGCTCTATTGGAGTTCTGGTGGGAGGGCAAGCCATGGTGTTGTaGAGGGCATGGAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LGASRTMLVGSIGVLVGGQAMVL*RAWKGR
Trigger: TCTTCCTTTCCATGCCCTCCACAACACCATGGCTTG...CCCTCCCACCAGAACTCCAATAGAGCCCACTAACATAGTCCTAGATGCCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp GGGCAGCACATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGTTAGTGGGCTCTATTaGAGTTCTGGTGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GQHMAGHHHCGSFCIHSQVSGLY*SSGGRE
Trigger: TTCCCTCCCACCAGAACTCCAATAGAGCCCACTAAC...CTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp CTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTTGGCCTCATCTTCCTTaGAGACCCTTAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLPAWSLMEIAGVSWSRSWPHLP*RPLVLG
Trigger: GCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCA...AGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp AGAAAGAGATTACTAAATAGTCTTAGCCCTTCATTGGAGGAACAGAAATGTGGGCGGCCAGGCAGGGACTaGGGGAGGGGCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: RKRLLNSLSPSLEEQKCGRPGRD*GRGHFS
Trigger: AGAGAAGTGGCCCCTCCCTCAGTCCCTGCCTGGCCG...CCCACATTTCTGTTCCTCCAATGAAGGGCTAAGACTATTTAGTAATCTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGAGGTGGAGGTGAGAGGATCGCTTaGGACCAGGAGTTTCAACTA +
Preference number: 4 (lower is better)
Translates to: HGWTPSLWKFLHSFPGGGGERIA*DQEFQL
Trigger: TAGTTGAAACTCCTGGTCTCAAGCGATCCTCTCACC...TCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp TTGGGGGCATCTAGGACTATGTTAGTGGGCTCTATTGGAGTTCTGGTGGGAGGGAATTCCTGCAGAGGGTaGGACAACAGCTCATTTCAG +
Preference number: 4 (lower is better)
Translates to: LGASRTMLVGSIGVLVGGNSCRG*DNSSFQ
Trigger: CTGAAATGAGCTGTTGTCTCACCCTCTGCAGGAATT...CCCTCCCACCAGAACTCCAATAGAGCCCACTAACATAGTCCTAGATGCCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp GCATGTCGTGGATGGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCTTTTGTCTGCAATTATaGGTGCTGGTGGGTATTGTG +
Preference number: 4 (lower is better)
Translates to: ACRGWRSRKSQERDSPKGFCLQL*VLVGIV
Trigger: CACAATACCCACCAGCACTCATAATTGCAGACAAAA...GCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp TTGCCTAGAAAACAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCGAGGGGCCACTTCTCTaGCTCAGAGAGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPRKQYTTKVVRTACKQVEGPLL*LREVPR
Trigger: CCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTC...GACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTGTTTTCTAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp ACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGCACTGTGGAAGTTTCTaGATTCATTCCCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TSSDDEAYCLSTAHAKSLHCGSF*IHSQEV
Trigger: CACCTCCTGGGAATGAATGCAGAAACTTCCACAGTG...CAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp CTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTGTGGCTCATCTGCCCTaGAATCGAGAGATAGGCACA +
Preference number: 4 (lower is better)
Translates to: LQESPLLPAWSLMEIAGVVAHLP*NREIGT
Trigger: TGTGCCTATCTCTCGATTCCAGGGCAGATGAGCCAC...AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CATCTCTGTGTGTGTGTGCACGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTAGGGTGGTGATGTTGTaGCTCATCTGCCCTGGAATC +
Preference number: 4 (lower is better)
Translates to: HLCVCVHAFVCLKNVVQPRVVML*LICPGI
Trigger: GATTCCAGGGCAGATGAGCCACAACATCACCACCCT...AGGCTGAACCACATTCTTTAGGCACACAAAGGCGTGCACACACACACAGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp ACTTCCTACTTCGCCTCTCTCTCCGAAGCGCTCTCTACAGAGGCACAACAAACACTGGTCCTCTTGTGGTaGCAAGGTGGTATTTATGGG +
Preference number: 4 (lower is better)
Translates to: TSYFASLSEALSTEAQQTLVLLW*QGGIYG
Trigger: CCCATAAATACCACCTTGCCACCACAAGAGGACCAG...TGTTTGTTGTGCCTCTGTAGAGAGCGCTTCGGAGAGAGAGGCGAAGTAGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp TGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTAGTCCTGGGCAGTGGATGCTACAGAACTTCTaGGTGGATTCCTTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: WRRAMASSSLKTLSPGQWMLQNF*VDSFQL
Trigger: GAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCAT...CCACTGCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp GCTCTTGTGGACTATCACGATGGCGTCATCGCCAGCACGGTGACTCCCCTGAAGGGACTATTCGAATTTTaGATTGCACCCCACTTTCAA +
Preference number: 4 (lower is better)
Translates to: ALVDYHDGVIASTVTPLKGLFEF*IAPHFQ
Trigger: TTGAAAGTGGGGTGCAATCCAAAATTCGAATAGTCC...CTTCAGGGGAGTCACCGTGCTGGCGATGACGCCATCGTGATAGTCCACAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TGCTTAATCTTGAGAGGTAATGAATGGGTAGAGATTGCTAGCCGGAGGTGTATTGGTGTCGGTGTGGGGTaGTTTCGGTTGGGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: CLILRGNEWVEIASRRCIGVGVG*FRLGAA
Trigger: TGCTGCCCCCAACCGAAACCACCCCACACCGACACC...AATACACCTCCGGCTAGCAATCTCTACCCATTCATTACCTCTCAAGATTAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TGGATAGGAACAGCTGAGTGGGAGTGTCAGTGGCACTGGAGTATGCAACACCAAAGTCCCAAAGGCCTGTaGGATCCTAAGTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: WIGTAEWECQWHWSMQHQSPKGL*DPKSLW
Trigger: CCACAAAGACTTAGGATCCCACAGGCCTTTGGGACT...TTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGGAGTGTCAGTGGCACTaGAGTATGCAACACCAAGTG +
Preference number: 4 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQECQWH*SMQHQV
Trigger: CACTTGGTGTTGCATACTCCAGTGCCACTGACACTC...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp CTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTTTTCTGCAGCCAGGCTaGCCCTACAAATCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLPAWSLMEIAGVSWSRSFLQPG*PYKSPS
Trigger: AGAAGGGGATTTGTAGGGTCAGCCTGGCTGCAGAAA...AGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTACCTGCGTGGTCTTTaGTGGAAATCGCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LQESPLLPAWSLMEIAGVYLRGL*WKSLGF
Trigger: AAACCCCAGCGATTTCCATCAAAGACCACGCAGGTA...AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp ACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGCATGTCTCAGAGAAATaGTGCCAAGTTTCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: TSSDDEAYCLSTAHAKSLHVSEK*CQVSVR
Trigger: CCTCACTGAAACTTGGCATCATTTCTCTGAGACATG...CAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp AGTTTCATTGCCACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTGCTACACAAGGGGCAGGAATaGACATTCTCCAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SFIATFLSFLVVQAIRVLHKGQE*TFSKGQ
Trigger: CTGCCCTTTGGAGAATGTTCATTCCTGCCCCTTGTG...TAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTGGCAATGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp TGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTAGTCCTGGGCAGTGGATCACCTCTGTTACCTaGGTGGTCTTTGATGGAAAT +
Preference number: 4 (lower is better)
Translates to: WRRAMASSSLKTLSPGQWITSVT*VVFDGN
Trigger: ATTTCCATCAAAGACCACGCAGGTAACAGAGGTGAT...CCACTGCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGAGCACTCTCTGGAATTaGAGAAGCAGGATGTGTTTC +
Preference number: 4 (lower is better)
Translates to: WKSLGFLGQDLSQPFCSQSTLWN*RSRMCF
Trigger: GAAACACATCCTGCTTCTGCAATTCCAGAGAGTGCT...CTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATTTGTTGCTTATTCATTaGCTAGTCCAGGAACAAGAA +
Preference number: 4 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHLLLIH*LVQEQE
Trigger: TTCTTGTTCCTGGACTAGGCAATGAATAAGCAACAA...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGTGGGGTAGAAGTAGCTaGTGCGGTTGTATCGTGCTA +
Preference number: 4 (lower is better)
Translates to: LMEIAGVSWSRSEPAFLQWGRSS*CGCIVL
Trigger: TAGCACGATACAACCGCACCAGCTACTTCTACCCCA...CTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CAGGTGGGTTTTGTGTTTGTGGTAGGCCTGTATGTGCGCATATTCACACATATGTGTGGTGAAGCCACCTaGAGAAGGGCAATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QVGFVFVVGLYVRIFTHMCGEAT*RRAMAS
Trigger: TGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA...CATATGTGTGAATATGCGCACATACAGGCCTACCACAAACACAAAACCCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CCA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTGCAATTATGAGTGCTaGTGGGTATTGTGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCCNYEC*WVLCFK
Trigger: CTTGAAACACAATACCCACCAGCACTCATAATTGCA...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TGCTTAATCTTGAGAGGTAATGAATGGGTAGAGATTGCTAGCCGGAGGTGTATTCTTTGTGGTGGGAGCTaGGTGTCGGTGTGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: CLILRGNEWVEIASRRCILCGGS*VSVWGG
Trigger: ACCACCCCACACCGACACCCAGCTCCCACCACAAAG...AATACACCTCCGGCTAGCAATCTCTACCCATTCATTACCTCTCAAGATTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp AGTTTCATTGCCACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTGCTAGAGTGGGAGTGTCAGTaGCACTGGAGTATGCAACAC +
Preference number: 4 (lower is better)
Translates to: SFIATFLSFLVVQAIRVLEWECQ*HWSMQH
Trigger: GTGTTGCATACTCCAGTGCCACTGACACTCCCACTC...TAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTGGCAATGAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp AGTTTCATTGCCACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTGCTAACATGCAGGTGGGCATaGATAGGAACAGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SFIATFLSFLVVQAIRVLTCRWA*IGTAEW
Trigger: CCACTCAGCTGTTCCTATCCATGCCCACCTGCATGT...TAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTGGCAATGAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 72 bp CAAGGTGGTATTTATGGGGAGCATATCCCCTTCATTTaGTCTCTGCAAACACCCACGTGGGCAAGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: QGGIYGEHIPFI*SLQTPTWARPE
Trigger: TTCTGGCCTTGCCCACGTGGGTGTTTGCAGAGACAAAATGAAGGGGATATGCTCCCCATAAATACCACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp ACTTCCTACTTCGCCTCTCTCTCCGAAGCGCTCTCTACAGAGGCACAACAAACATCTATGTGTGTGTTATaGGTCACGTGTGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: TSYFASLSEALSTEAQQTSMCVL*VTCASL
Trigger: CAGAGATGCACACGTGACTCATAACACACACATAGA...TGTTTGTTGTGCCTCTGTAGAGAGCGCTTCGGAGAGAGAGGCGAAGTAGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR TCA 90 bp GGGCAGCACATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGTCCAAAAATGTCTGCTaGGCATCAGGGTACAAACAA +
Preference number: 4 (lower is better)
Translates to: GQHMAGHHHCGSFCIHSQSKNVC*ASGYKQ
Trigger: TTGTTTGTACCCTGATGCTCAGCAGACATTTTTGGA...CTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp CAGGTGGGTTTTGTGTTTGTGGTAGGCCTGTATGTGCGCATATTCACACATATGACGAGCAGATGGCTGTaGTCCGAGCTCTCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: QVGFVFVVGLYVRIFTHMTSRWL*SELSEN
Trigger: ATTCTCAGAGAGCTCGGAGCACAGCCATCTGCTCGT...CATATGTGTGAATATGCGCACATACAGGCCTACCACAAACACAAAACCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR GCA 90 bp CATCTCTGTGTGTGTGTGCACGCCTTTGTGTGCCTAAAGAATGTGGTTCAGCCTGTGCACGCCTTTGTGTaGCTAAAGAATGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: HLCVCVHAFVCLKNVVQPVHAFV*LKNVVQ
Trigger: CTGAACCACATTCTTTAGGCACACAAAGGCGTGCAC...AGGCTGAACCACATTCTTTAGGCACACAAAGGCGTGCACACACACACAGAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTATCACCTCTGTTACCTaGGTGGTCTTTGATGGAAAT +
Preference number: 4 (lower is better)
Translates to: CGEATWRRAMASSSLKTLITSVT*VVFDGN
Trigger: ATTTCCATCAAAGACCACGCAGGTAACAGAGGTGAT...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TTGGGGGCATCTAGGACTATGTTAGTGGGCTCTATTGGAGTTCTGGTGGGAGGGATTCGAATTTTGGATTaGACCCCACTTTCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: LGASRTMLVGSIGVLVGGIRILD*TPLSRH
Trigger: GTGCCTTGAAAGTGGGGTGCAATCCAAAATTCGAAT...CCCTCCCACCAGAACTCCAATAGAGCCCACTAACATAGTCCTAGATGCCCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp ACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGGTCTGCAATTATGAGTaGTGGTGGGTATTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: TSSDDEAYCLSTAHAKSLVCNYE*WWVLCF
Trigger: GAAACACAATACCCACCAGCACTCATAATTGCAGAC...CAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp CAGAAGCAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGACAACGGAACCTCACTaGGGCCTGTCCCGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QKQDVFLKRVSFLDCILKTTEPH*GLSRLP
Trigger: TGGGAGGCGGGACAGGCCCCAGTGAGGTTCCGTTGT...CTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536005.7
CDS-3UTR CCA 90 bp TGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGTTTGATGGAAATCGCTaGGGTTTCTTGGTCAAGATC +
Preference number: 4 (lower is better)
Translates to: WKSLGFLGQDLSQPFCSQFDGNR*GFLVKI
Trigger: GATCTTGACCAAGAAACCCCAGCGATTTCCATCAAA...CTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGAGGTGGAAGAACATCTCAAGGGTaGAAGAAAAGCCCAGGGTTA +
Preference number: 4 (lower is better)
Translates to: HGWTPSLWKFLHSFPGGGRTSQG*KKSPGL
Trigger: TAACCCTGGGCTTTTCTTCCACCCTTGAGATGTTCT...TCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
3UTR CAA 72 bp GGTCTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTaGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCT +
Preference number: 4 (lower is better)
Translates to: GLQESPLLPAWS*MEIAGVSWSRS
Trigger: AGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
3UTR CAA 72 bp ACGGGTTTTGTCTGCAATTATGAGTGCTGGTGGGTATaGTGTTTCAAGGTGAGAGGAGGGGCTTCCTCATTC +
Preference number: 4 (lower is better)
Translates to: TGFVCNYECWWV*CFKVRGGASSF
Trigger: GAATGAGGAAGCCCCTCCTCTCACCTTGAAACACAATACCCACCAGCACTCATAATTGCAGACAAAACCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp CATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGAGGTGGAACTCCTGTAAGGCACTaGCTATCCAAATATCCACAT +
Preference number: 4 (lower is better)
Translates to: HGWTPSLWKFLHSFPGGGTPVRH*LSKYPH
Trigger: ATGTGGATATTTGGATAGTCAGTGCCTTACAGGAGT...TCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp AGAAAGAGATTACTAAATAGTCTTAGCCCTTCATTGGAGGAACAGAAATGTGGGGGACATACAGCTGAGTaGCCCCTGGCCCCACACACT +
Preference number: 4 (lower is better)
Translates to: RKRLLNSLSPSLEEQKCGGHTAE*PLAPHT
Trigger: AGTGTGTGGGGCCAGGGGCCACTCAGCTGTATGTCC...CCCACATTTCTGTTCCTCCAATGAAGGGCTAAGACTATTTAGTAATCTCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGGCTATAGTCCTGGGCAGTGGCTaGACTGATGAGGGAACCGCC +
Preference number: 4 (lower is better)
Translates to: QDVFLKRVSFLDCILKAIVLGSG*TDEGTA
Trigger: GGCGGTTCCCTCATCAGTCCAGCCACTGCCCAGGAC...TATAGCCTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGCTTCTGGTCCTCTTGTaGTGGCAAGGTGGTATTTAT +
Preference number: 4 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKLLVLL*WQGGIY
Trigger: ATAAATACCACCTTGCCACCACAAGAGGACCAGAAG...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TGCCTAGAAAACAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCCACAACGGAACCTCACTaGGGCCTGTATGTGCGCATA +
Preference number: 4 (lower is better)
Translates to: CLENSTPLRWSELLVNKSTTEPH*GLYVRI
Trigger: TATGCGCACATACAGGCCCCAGTGAGGTTCCGTTGT...GGACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTGTTTTCTAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562849.6
CDS-3UTR CCA 90 bp GGGCAGCACATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGATGACAAGGCTTCAATaGTGCTTAATCTTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GQHMAGHHHCGSFCIHSQMTRLQ*CLILRG
Trigger: ACCTCTCAAGATTAAGCACCATTGAAGCCTTGTCAT...CTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATGTGCTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGTGGACACCATCACTGTaGAAGTTTCTGCATTCATTC +
Preference number: 4 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQWTPSL*KFLHSF
Trigger: GAATGAATGCAGAAACTTCCACAGTGATGGTGTCCA...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR TCA 90 bp TTGCCTAGAAAACAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCAGGGGCAGGGACGTTTaGAGGACATGTAATCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPRKQYTTKVVRTACKQVRGRDV*RTCNPW
Trigger: CCAAGGATTACATGTCCTTCAAACGTCCCTGCCCCT...GACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTGTTTTCTAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536005.7
CDS-3UTR TCA 90 bp AGTTTCATTGCCACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTGCTAAGCCCAGGGTTAAAATaGCGGGTTTTGTCTGCAATT +
Preference number: 4 (lower is better)
Translates to: SFIATFLSFLVVQAIRVLSPGLK*RVLSAI
Trigger: AATTGCAGACAAAACCCGTCATTTTAACCCTGGGCT...TAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTGGCAATGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp TTGGGGGCATCTAGGACTATGTTAGTGGGCTCTATTGGAGTTCTGGTGGGAGGGACAAGGCTTCAATGGTaGTTAATCTTGAGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: LGASRTMLVGSIGVLVGGTRLQW*LILRGN
Trigger: ATTACCTCTCAAGATTAAGCACCATTGAAGCCTTGT...CCCTCCCACCAGAACTCCAATAGAGCCCACTAACATAGTCCTAGATGCCCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp CTCATTCCTGGACTGCATTTTAAAGGCTATACAGTACAACAGACAGATATTTTTCAGGACCCGGCTGGCTaGGTCCCTCACACAATCCTC +
Preference number: 4 (lower is better)
Translates to: LIPGLHFKGYTVQQTDIFQDPAG*VPHTIL
Trigger: GAGGATTGTGTGAGGGACCCAGCCAGCCGGGTCCTG...AAAAATATCTGTCTGTTGTACTGTATAGCCTTTAAAATGCAGTCCAGGAATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp TTGCCTAGAAAACAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCAGGCAGAATAGAATTTaGGCGCAGCTTGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: LPRKQYTTKVVRTACKQVRQNRI*AQLAGR
Trigger: TCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCT...GACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTGTTTTCTAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536005.7
CDS-3UTR CCA 90 bp AACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCTACACCTCTGTTACCTGCGTaGTCTTTGATGGAAATCGCT +
Preference number: 4 (lower is better)
Translates to: NFWVDSFQLRTRRNAISTPLLPA*SLMEIA
Trigger: AGCGATTTCCATCAAAGACCACGCAGGTAACAGAGG...TGTAGAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CAGAAGCAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGCCACCCTCTGTGGGCTaGGTCTTCAGGAATCACCTC +
Preference number: 4 (lower is better)
Translates to: QKQDVFLKRVSFLDCILKPPSVG*VFRNHL
Trigger: GAGGTGATTCCTGAAGACCCAGCCCACAGAGGGTGG...CTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp TTGGGGGCATCTAGGACTATGTTAGTGGGCTCTATTGGAGTTCTGGTGGGAGGGTCAGAACAGAGGGCATaGAAAATGATTATTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LGASRTMLVGSIGVLVGGSEQRA*KMIILL
Trigger: AAGCAAAATAATCATTTTGCATGCCCTCTGTTCTGA...CCCTCCCACCAGAACTCCAATAGAGCCCACTAACATAGTCCTAGATGCCCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CCA 90 bp TTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGATATTCACACATATGTaGAGCACGTCTAGATCTGTG +
Preference number: 4 (lower is better)
Translates to: LMEIAGVSWSRSEPAFLQIFTHM*STSRSV
Trigger: CACAGATCTAGACGTGCTCCACATATGTGTGAATAT...CTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp CAGAAGCAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGGCAGCTGACCTTGGATaGTCCAGCAGTTTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: QKQDVFLKRVSFLDCILKAADLG*SSSFQR
Trigger: CCTCTGGAAACTGCTGGACCATCCAAGGTCAGCTGC...CTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536005.7
CDS-3UTR CCA 90 bp TTGCCTAGAAAACAGTACACCACTAAGGTGGTCAGAACTGCTTGTAAACAAGTCCTGGTCCTCTTGTGGTaGCAAGGTGGTATTTATGGG +
Preference number: 4 (lower is better)
Translates to: LPRKQYTTKVVRTACKQVLVLLW*QGGIYG
Trigger: CCCATAAATACCACCTTGCCACCACAAGAGGACCAG...GACTTGTTTACAAGCAGTTCTGACCACCTTAGTGGTGTACTGTTTTCTAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp AACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCTACAATCACCTCTGTTACCTaGGTGGTCTTTGATGGAAAT +
Preference number: 4 (lower is better)
Translates to: NFWVDSFQLRTRRNAISTITSVT*VVFDGN
Trigger: ATTTCCATCAAAGACCACGCAGGTAACAGAGGTGAT...TGTAGAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp ACAGAACTTCTGGGTGGATTCCTTTCAGCTCCGCACCAGAAGAAATGCTATCTCGTCTCATTCCTGGACTaGATTTTAAAGGCTATACAG +
Preference number: 4 (lower is better)
Translates to: TELLGGFLSAPHQKKCYLVSFLD*ILKAIQ
Trigger: CTGTATAGCCTTTAAAATGCAGTCCAGGAATGAGAC...GAGATAGCATTTCTTCTGGTGCGGAGCTGAAAGGAATCCACCCAGAAGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CCA 90 bp AGAAAGAGATTACTAAATAGTCTTAGCCCTTCATTGGAGGAACAGAAATGTGGGACACTCCTCGTAGCCTaGTGGAGAATCTGGGTACAG +
Preference number: 4 (lower is better)
Translates to: RKRLLNSLSPSLEEQKCGTLLVA*WRIWVQ
Trigger: CTGTACCCAGATTCTCCACCAGGCTACGAGGAGTGT...CCCACATTTCTGTTCCTCCAATGAAGGGCTAAGACTATTTAGTAATCTCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp CTCATTCCTGGACTGCATTTTAAAGGCTATACAGTACAACAGACAGATATTTTTTGGCCTCATCTTCCTTaGAGACCCTTAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LIPGLHFKGYTVQQTDIFWPHLP*RPLVLG
Trigger: GCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCA...AAAAATATCTGTCTGTTGTACTGTATAGCCTTTAAAATGCAGTCCAGGAATGAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR TCA 90 bp AGAAAGAGATTACTAAATAGTCTTAGCCCTTCATTGGAGGAACAGAAATGTGGGTACCTGCGTGGTCTTTaGTGGAAATCGCTGGGGTTT +
Preference number: 4 (lower is better)
Translates to: RKRLLNSLSPSLEEQKCGYLRGL*WKSLGF
Trigger: AAACCCCAGCGATTTCCATCAAAGACCACGCAGGTA...CCCACATTTCTGTTCCTCCAATGAAGGGCTAAGACTATTTAGTAATCTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
3UTR CAA 72 bp AACAGGAAAATGACAAGGCTTCAATGGTGCTTAATCTaGAGAGGTAATGAATGGGTAGAGATTGCTAGCCGG +
Preference number: 4 (lower is better)
Translates to: NRKMTRLQWCLI*RGNEWVEIASR
Trigger: CCGGCTAGCAATCTCTACCCATTCATTACCTCTCAAGATTAAGCACCATTGAAGCCTTGTCATTTTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR GCA 90 bp CAGGATGTGTTTCTTAAAAGAGTCTCATTCCTGGACTGCATTTTAAAGGCTATAGTGCACGCCTTTGTGTaGCTAAAGAATGTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: QDVFLKRVSFLDCILKAIVHAFV*LKNVVQ
Trigger: CTGAACCACATTCTTTAGGCACACAAAGGCGTGCAC...TATAGCCTTTAAAATGCAGTCCAGGAATGAGACTCTTTTAAGAAACACATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp AGAAAGAGATTACTAAATAGTCTTAGCCCTTCATTGGAGGAACAGAAATGTGGGTTGTTGCTTATTCATTaGCTAGTCCAGGAACAAGAA +
Preference number: 4 (lower is better)
Translates to: RKRLLNSLSPSLEEQKCGLLLIH*LVQEQE
Trigger: TTCTTGTTCCTGGACTAGGCAATGAATAAGCAACAA...CCCACATTTCTGTTCCTCCAATGAAGGGCTAAGACTATTTAGTAATCTCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR GCA 90 bp CTCATTCCTGGACTGCATTTTAAAGGCTATACAGTACAACAGACAGATATTTTTGTCTCATTCCTGGACTaGATTTTAAAGGCTATACAG +
Preference number: 4 (lower is better)
Translates to: LIPGLHFKGYTVQQTDIFVSFLD*ILKAIQ
Trigger: CTGTATAGCCTTTAAAATGCAGTCCAGGAATGAGAC...AAAAATATCTGTCTGTTGTACTGTATAGCCTTTAAAATGCAGTCCAGGAATGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS TCA 90 bp CCCTGGGGAGCGGCGGCGGTGCCACTCAGCGCTGCGCAGCCAGCCTaGGCTGCCTGCCGCCTCGCCTCGTACTCAGCCTCGGGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: PWGAAAVPLSAAQPA*AACRLASYSASGPS
Trigger: AGAGGGACCCGAGGCTGAGTACGAGGCGAGGCGGCAGGCAGCTCAGGCTGGCTGCGCAGCGCTGAGTGGCACCGCCGCCGCTCCCCAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS CCA 90 bp GGCCAGGGCTGTGGCCGCTGCCTGAGTCGGAGGTGCCATCCAGCGTaGGGCAGGAATCAGTCAGCGAGTAGGGTGGTGGTGCGTCCGTGG +
Preference number: 5 (lower is better)
Translates to: GQGCGRCLSRRCHPA*GRNQSASRVVVRPW
Trigger: CCACGGACGCACCACCACCCTACTCGCTGACTGATTCCTGCCCCACGCTGGATGGCACCTCCGACTCAGGCAGCGGCCACAGCCCTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS TCA 90 bp GGTCCTCTGCTCCTGCTGGTGTCGGCCAGGGCTGTGGCCGCTGCCTaGGTCGGAGGTGCCATCCAGCGTGGGGCAGGAATCAGTCAGCGA +
Preference number: 5 (lower is better)
Translates to: GPLLLLVSARAVAAA*VGGAIQRGAGISQR
Trigger: TCGCTGACTGATTCCTGCCCCACGCTGGATGGCACCTCCGACTCAGGCAGCGGCCACAGCCCTGGCCGACACCAGCAGGAGCAGAGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS TCA 90 bp TGGGAGAAGGTGCGGAGGGCGCGCTCTCTCTCCGACGCTCGGTGCTaGGACAGAGGCACGGAGACAGGGGCATACCCCAGGCGACCTGCT +
Preference number: 5 (lower is better)
Translates to: WEKVRRARSLSDARC*DRGTETGAYPRRPA
Trigger: AGCAGGTCGCCTGGGGTATGCCCCTGTCTCCGTGCCTCTGTCTCAGCACCGAGCGTCGGAGAGAGAGCGCGCCCTCCGCACCTTCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS-3UTR CAA 90 bp GTGGGCTGTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCAGAATTTGGGCGCAGCTaGCTGGGCGAGGGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: VGCEGLQFAPETPDPGPPEFGRS*LGEGRG
Trigger: GCCCCTACCCTCGCCCAGCAAGCTGCGCCCAAATTC...TGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCACAGCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS TCA 90 bp CCTTGGAGCAGAACAGCGGAGCCAGCCTGCCCACGGGCACAGCTCTaGCTTCTCGCAGGGAAGGCCCCTCCACTCACCGCTCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PWSRTAEPACPRAQL*LLAGKAPPLTALQP
Trigger: AGGCTGGAGAGCGGTGAGTGGAGGGGCCTTCCCTGCGAGAAGTCAGAGCTGTGCCCGTGGGCAGGCTGGCTCCGCTGTTCTGCTCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS GCA 90 bp GGGGTAGAAGTAGCTGGTGCGGTTGTATCGTGCTATCGGCTTGGCTaGAGCGCTCCGCTCCGTGCGCCGCAGTGCCGGCTCCAGCTTCGG +
Preference number: 5 (lower is better)
Translates to: GVEVAGAVVSCYRLG*SAPLRAPQCRLQLR
Trigger: CCGAAGCTGGAGCCGGCACTGCGGCGCACGGAGCGGAGCGCTGCAGCCAAGCCGATAGCACGATACAACCGCACCAGCTACTTCTACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000561796.5
ENST00000562849.6
CDS-3UTR CAA 90 bp CCCTTAGTCCTGGGCAGTGGCTGGACTGATGAGGGAACCGCCGCTGCACACCCACTGAGGGTACTGGGGTaGGGAGGGGGCCTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: PLVLGSGWTDEGTAAAHPLRVLG*GGGLVG
Trigger: GCCCACTAGGCCCCCTCCCAACCCCAGTACCCTCAG...TGGGTGTGCAGCGGCGGTTCCCTCATCAGTCCAGCCACTGCCCAGGACTAAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS TCA 90 bp CTGAGCTGCCTGCCGCCTCGCCTCGTACTCAGCCTCGGGTCCCTCTaGCAGCGCAAGGGAAAGTCTGTCCCAAAGTGGGAGAAGGTGCGG +
Preference number: 5 (lower is better)
Translates to: LSCLPPRLVLSLGSL*QRKGKSVPKWEKVR
Trigger: CCGCACCTTCTCCCACTTTGGGACAGACTTTCCCTTGCGCTGTCAGAGGGACCCGAGGCTGAGTACGAGGCGAGGCGGCAGGCAGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS GCA 90 bp AGGGTGGGGGCCAGTCCTCTGAGGAGCTGCAGGCATAGCGCATCCTaGGGCTTGAGCGGCTGTATGTGTGCTCGTCCGACACGTAGCCGT +
Preference number: 5 (lower is better)
Translates to: RVGASPLRSCRHSAS*GLSGCMCARPTRSR
Trigger: ACGGCTACGTGTCGGACGAGCACACATACAGCCGCTCAAGCCGCAGGATGCGCTATGCCTGCAGCTCCTCAGAGGACTGGCCCCCACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000561796.5
ENST00000562849.6
ENST00000564819.5
ENST00000622872.4
CDS CCA 90 bp ATGTGGGGTAGAAGTAGCTGGTGCGGTTGTATCGTGCTATCGGCTTaGCTGCAGCGCTCCGCTCCGTGCGCCGCAGTGCCGGCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: MWGRSSWCGCIVLSA*LQRSAPCAAVPAPA
Trigger: AGCTGGAGCCGGCACTGCGGCGCACGGAGCGGAGCGCTGCAGCCAAGCCGATAGCACGATACAACCGCACCAGCTACTTCTACCCCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000561796.5
ENST00000562849.6
CDS-3UTR CAA 90 bp GGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGGTGAGGGCCTCCAGTTaGCGCCTGAGACCCCAGACC +
Preference number: 5 (lower is better)
Translates to: GDASRDTAQRCLAATLCGVRASS*RLRPQT
Trigger: GGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCAC...CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp GGCAGAGTGATGGCCGCTGGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGCTGAGGGTACTGGGGTaGGGAGGGGGCCTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: GRVMAAGDASRDTAQRCLLRVLG*GGGLVG
Trigger: GCCCACTAGGCCCCCTCCCAACCCCAGTACCCTCAG...CAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCCAGCGGCCATCACTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp CTGGGGAGGCTGTTGGGGGCTGTTGAGACCTCAGATGGGCTCAGAGCCATGGGCCCACTGGGGAGGCTGTaGGGGGCTGTTGAGACCTCA +
Preference number: 5 (lower is better)
Translates to: LGRLLGAVETSDGLRAMGPLGRL*GAVETS
Trigger: TGAGGTCTCAACAGCCCCCAACAGCCTCCCCAGTGG...GCCCATGGCTCTGAGCCCATCTGAGGTCTCAACAGCCCCCAACAGCCTCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS GCA 90 bp CCCTCTGACAGCGCAAGGGAAAGTCTGTCCCAAAGTGGGAGAAGGTaGGGAGGGCGCGCTCTCTCTCCGACGCTCGGTGCTGAGACAGAG +
Preference number: 5 (lower is better)
Translates to: PSDSARESLSQSGRR*GGRALSPTLGAETE
Trigger: CTCTGTCTCAGCACCGAGCGTCGGAGAGAGAGCGCGCCCTCCGCACCTTCTCCCACTTTGGGACAGACTTTCCCTTGCGCTGTCAGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS-3UTR CAA 90 bp TCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTGTATGTGCGCACTGAGGGTACTGGGGTaGGGAGGGGGCCTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: SRDRHSAQRNLTGACMCALRVLG*GGGLVG
Trigger: GCCCACTAGGCCCCCTCCCAACCCCAGTACCCTCAG...TGCGCACATACAGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562849.6
CDS-3UTR CAA 90 bp GGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGAGCGCATCCTGCGGCTaGAGCGGCTGTATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: GDASRDTAQRCLAATLCGSASCG*SGCMCA
Trigger: AGCACACATACAGCCGCTCAAGCCGCAGGATGCGCT...CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp CTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCAGCGCATCCTGCGGCTaGAGCGGCTGTATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: LLPPSSGRCLLLVCGSSCSASCG*SGCMCA
Trigger: AGCACACATACAGCCGCTCAAGCCGCAGGATGCGCT...GCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CAA 90 bp GGCGATGCTAGCAGGGACACTGCTCAGAGATGCTTGGCTGCCACCCTCTGTGGGACTGCTCAGAGATGCTaGGCTGCCACCCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GDASRDTAQRCLAATLCGTAQRC*AATLCG
Trigger: CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGT...CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGTGTCCCTGCTAGCATCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS TCA 90 bp CCTTGGAGCAGAACAGCGGAGCCAGCCTGCCCACGGGCACAGCTCTaGCTTCTCGCAGGGAAGGCCCCTCCATTTCAGATGAGGAAACTG +
Preference number: 5 (lower is better)
Translates to: PWSRTAEPACPRAQL*LLAGKAPPFQMRKL
Trigger: CAGTTTCCTCATCTGAAATGGAGGGGCCTTCCCTGCGAGAAGTCAGAGCTGTGCCCGTGGGCAGGCTGGCTCCGCTGTTCTGCTCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS GCA 90 bp GGCTGTGCTCCGAGCTCTCTGAGAATGTGGGGTAGAAGTAGCTGGTaGGGTTGTATCGTGCTATCGGCTTGGCTGCAGCGCTCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: GCAPSSLRMWGRSSW*GCIVLSAWLQRSAP
Trigger: CGGAGCGGAGCGCTGCAGCCAAGCCGATAGCACGATACAACCGCACCAGCTACTTCTACCCCACATTCTCAGAGAGCTCGGAGCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000561796.5
ENST00000562849.6
CDS-3UTR CAA 90 bp GTGGGCTGTGAGGGCCTCCAGTTTGCGCCTGAGACCCCAGACCCAGGTCCCCCATTACCTGCGTGGTCTTaGATGGAAATCGCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: VGCEGLQFAPETPDPGPPLPAWS*MEIAGV
Trigger: AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAA...TGGGGGACCTGGGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCACAGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp TCTGAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCGGCTCAAGCGGCTGTTGGGGGCTGTaGAGACCTCAGATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: SELCLLWVLASFSVPGSSGCWGL*RPQMGS
Trigger: TGAGCCCATCTGAGGTCTCAACAGCCCCCAACAGCC...GCTTGAGCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS TCA 90 bp TCGGCAGGGGCTCATCGGAAATCGTGGCTCAAGAGCAAGGATCCCTaGACCCCTGCCTCTCACACCAGTTACTTGCGCCCTCCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: SAGAHRKSWLKSKDP*TPASHTSYLRPPFP
Trigger: GGGAAAGGGAGGGCGCAAGTAACTGGTGTGAGAGGCAGGGGTTCAGGGATCCTTGCTCTTGAGCCACGATTTCCGATGAGCCCCTGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS GCA 90 bp GGCTCATCGGAAATCGTGGCTCAAGAGCAAGGATCCCTGAACCCCTaGCTCTCACACCAGTTACTTGCGCCCTCCCTTTCCCAGCCTGCG +
Preference number: 5 (lower is better)
Translates to: GSSEIVAQEQGSLNP*LSHQLLAPSLSQPA
Trigger: CGCAGGCTGGGAAAGGGAGGGCGCAAGTAACTGGTGTGAGAGGCAGGGGTTCAGGGATCCTTGCTCTTGAGCCACGATTTCCGATGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS GCA 90 bp TGGCCAAACACCTCAAGCCGTTCTCTGCAGCTCGACTCCAAGCTCTaGCCTTGCCTGGCCCCAAGTGGTGGAAGGATGTGGGGAGGAAAC +
Preference number: 5 (lower is better)
Translates to: WPNTSSRSLQLDSKL*PCLAPSGGRMWGGN
Trigger: GTTTCCTCCCCACATCCTTCCACCACTTGGGGCCAGGCAAGGGCAGAGCTTGGAGTCGAGCTGCAGAGAACGGCTTGAGGTGTTTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569272.1
ENST00000618932.1
CDS GCA 90 bp GTTGGACCCCTGCAGTTCTTTGGCCAAACACCTCAAGCCGTTCTCTaGAGCTCGACTCCAAGCTCTGCCCTTGCCTGGCCCCAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: VGPLQFFGQTPQAVL*SSTPSSALAWPQVV
Trigger: CACCACTTGGGGCCAGGCAAGGGCAGAGCTTGGAGTCGAGCTGCAGAGAACGGCTTGAGGTGTTTGGCCAAAGAACTGCAGGGGTCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS CCA 90 bp CGGGGGACACGAGCAGATGGCTGTGCTCCGAGCTCTCTGAGAATGTaGGGTAGAAGTAGCTGGTGCGGTTGTATCGTGCTAAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: RGTRADGCAPSSLRM*GRSSWCGCIVLRGR
Trigger: CCTGCCCCTTAGCACGATACAACCGCACCAGCTACTTCTACCCCACATTCTCAGAGAGCTCGGAGCACAGCCATCTGCTCGTGTCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000622872.4
CDS-3UTR CAA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTCGTGTGAAGGCCACCTaGGGCCGGGGTCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: CGEATWRRAMASSSLKTLRVKAT*GRGPLL
Trigger: GAGCAGAGGACCCCGGCCCAAGGTGGCCTTCACACG...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp CTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCCCTGACTTGTTCACTTaGAGCAGTGGCAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: LLPPSSGRCLLLVCGSSCPDLFT*SSGSSE
Trigger: CTCGCTGCTGCCACTGCTCAAAGTGAACAAGTCAGG...GCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CAA 90 bp AGCCTTACTCTGTATCAACCCTCCTTCCGCCCTCTTCTGGGCGATGCCTGTTGCGCAGTGGTGACCTGCTaGGTGACCCCCTCACTGGCT +
Preference number: 5 (lower is better)
Translates to: SLTLYQPSFRPLLGDACCAVVTC*VTPSLA
Trigger: AGCCAGTGAGGGGGTCACCAAGCAGGTCACCACTGC...GCAACAGGCATCGCCCAGAAGAGGGCGGAAGGAGGGTTGATACAGAGTAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS GCA 90 bp TCAGTTCTCAGGGAGCATCTTGCAGACGTCAGGGGTCTTCCGTGTTaGCCTCTCCCCACCCAGCATGCCACATTAGCCTCTGGTTGGACC +
Preference number: 5 (lower is better)
Translates to: SVLREHLADVRGLPC*PLPTQHATLASGWT
Trigger: GGTCCAACCAGAGGCTAATGTGGCATGCTGGGTGGGGAGAGGGCAACACGGAAGACCCCTGACGTCTGCAAGATGCTCCCTGAGAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS CCA 90 bp GATGGCTGTGCTCCGAGCTCTCTGAGAATGTGGGGTAGAAGTAGCTaGTGCGGTTGTATCGTGCTATCGGCTTGGCTGCAGCGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: DGCAPSSLRMWGRSS*CGCIVLSAWLQRSA
Trigger: AGCGGAGCGCTGCAGCCAAGCCGATAGCACGATACAACCGCACCAGCTACTTCTACCCCACATTCTCAGAGAGCTCGGAGCACAGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000561796.5
ENST00000562849.6
CDS CCA 90 bp CGGGGGACACGAGCAGATGGCTGTGCTCCGAGCTCTCTGAGAATGTaGGGTAGAAGTAGCTGGTGCGGTTGTATCGTGCTATCGGCTTGG +
Preference number: 5 (lower is better)
Translates to: RGTRADGCAPSSLRM*GRSSWCGCIVLSAW
Trigger: CCAAGCCGATAGCACGATACAACCGCACCAGCTACTTCTACCCCACATTCTCAGAGAGCTCGGAGCACAGCCATCTGCTCGTGTCCCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000561796.5
ENST00000562849.6
CDS-3UTR CAA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTGAATTTGGGCGCAGCTaGCTGGGCGAGGGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: CGEATWRRAMASSSLKTLEFGRS*LGEGRG
Trigger: GCCCCTACCCTCGCCCAGCAAGCTGCGCCCAAATTC...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CAA 90 bp TCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGGCTGACACTGCTCAGAGATGCTaGGCTGCCACCCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: SLGFLGQDLSQPFCSQADTAQRC*AATLCG
Trigger: CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGT...GTCAGCCTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp CTGGGGAGGCTGTTGGGGGCTGTTGAGACCTCAGATGGGCTCAGAGCCATGGGCTGCTTGACATTCTCTTaGCTGATGGCCTGGACCAGT +
Preference number: 5 (lower is better)
Translates to: LGRLLGAVETSDGLRAMGCLTFS*LMAWTS
Trigger: ACTGGTCCAGGCCATCAGCAAAGAGAATGTCAAGCA...GCCCATGGCTCTGAGCCCATCTGAGGTCTCAACAGCCCCCAACAGCCTCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CAA 90 bp TTGGGGGCATCTAGGACTATGTTAGTGGGCTCTATTGGAGTTCTGGTGGGAGGGGTGGGGTGGTTTCGGTaGGGGGCAGCACATGGCTGG +
Preference number: 5 (lower is better)
Translates to: LGASRTMLVGSIGVLVGGVGWFR*GAAHGW
Trigger: CCAGCCATGTGCTGCCCCCAACCGAAACCACCCCAC...CCCTCCCACCAGAACTCCAATAGAGCCCACTAACATAGTCCTAGATGCCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CAA 90 bp GCATGTCGTGGATGGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCTCTGGGCGATGCCTGTaGCTTGTGTGTGGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ACRGWRSRKSQERDSPKGSGRCL*LVCGSS
Trigger: GCTGCTGCCACACACAAGCAACAGGCATCGCCCAGA...GCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS TCA 90 bp CACCAGCACGGGGGACACGAGCAGATGGCTGTGCTCCGAGCTCTCTaGGAATGTGGGGTAGAAGTAGCTGGTGCGGTTGTATCGTGCTAT +
Preference number: 5 (lower is better)
Translates to: HQHGGHEQMAVLRAL*ECGVEVAGAVVSCY
Trigger: ATAGCACGATACAACCGCACCAGCTACTTCTACCCCACATTCTCAGAGAGCTCGGAGCACAGCCATCTGCTCGTGTCCCCCGTGCTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000561796.5
ENST00000562849.6
CDS CCA 90 bp TCTTCCGTGTTGCCCTCTCCCCACCCAGCATGCCACATTAGCCTCTaGTTGGACCCCTGCAGTTCTTTGGCCAAACACCTCAAGCCGTTC +
Preference number: 5 (lower is better)
Translates to: SSVLPSPHPACHISL*LDPCSSLAKHLKPF
Trigger: GAACGGCTTGAGGTGTTTGGCCAAAGAACTGCAGGGGTCCAACCAGAGGCTAATGTGGCATGCTGGGTGGGGAGAGGGCAACACGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS-3UTR CAA 90 bp TGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTAGTCCTGGGCAGTGGAGCGCATCCTGCGGCTaGAGCGGCTGTATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: WRRAMASSSLKTLSPGQWSASCG*SGCMCA
Trigger: AGCACACATACAGCCGCTCAAGCCGCAGGATGCGCT...CCACTGCCCAGGACTAAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp TGGTCCAGCAGTTTCCAGAGGCAGAATAGAATTTGGGCGCAGCTTGCTGGGCGAAGCGCATCCTGCGGCTaGAGCGGCTGTATGTGTGCT +
Preference number: 5 (lower is better)
Translates to: WSSSFQRQNRIWAQLAGRSASCG*SGCMCA
Trigger: AGCACACATACAGCCGCTCAAGCCGCAGGATGCGCT...TCGCCCAGCAAGCTGCGCCCAAATTCTATTCTGCCTCTGGAAACTGCTGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CAA 90 bp CCCTTAGTCCTGGGCAGTGGCTGGACTGATGAGGGAACCGCCGCTGCACACCCAAGTCTTAGCCCTTCATaGGAGGAACAGAAATGTGGG +
Preference number: 5 (lower is better)
Translates to: PLVLGSGWTDEGTAAAHPSLSPS*EEQKCG
Trigger: CCCACATTTCTGTTCCTCCAATGAAGGGCTAAGACT...TGGGTGTGCAGCGGCGGTTCCCTCATCAGTCCAGCCACTGCCCAGGACTAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp ATGAGGGAACCGCCGCTGCACACCCACGGAGGGCCCTGCCCATCTACCTGGGGCATTGTTGCTTATTCATaGCCTAGTCCAGGAACAAGA +
Preference number: 5 (lower is better)
Translates to: MREPPLHTHGGPCPSTWGIVAYS*PSPGTR
Trigger: TCTTGTTCCTGGACTAGGCAATGAATAAGCAACAAT...GCCCCAGGTAGATGGGCAGGGCCCTCCGTGGGTGTGCAGCGGCGGTTCCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp TTGCCACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTGCTACAAGCCACCTGGGGTGTTCTCCTaGGCCCCTGGCACAGACAGG +
Preference number: 5 (lower is better)
Translates to: LPLSSLSWWYKPSGCYKPPGVFS*APGTDR
Trigger: CCTGTCTGTGCCAGGGGCCAAGGAGAACACCCCAGG...TGGCTTGTAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS TCA 90 bp GAACACCATCTGCTTGACATTCTCTTTGCTGATGGCCTGGACCAGTaGGAACTCAGACTCCAAGGTGGCCGTGTAGCCCAGCCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: EHHLLDILFADGLDQ*ELRLQGGRVAQPAQ
Trigger: CTGGGCAGGCTGGGCTACACGGCCACCTTGGAGTCTGAGTTCTCACTGGTCCAGGCCATCAGCAAAGAGAATGTCAAGCAGATGGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4
CDS TCA 90 bp GTGGTGGAAGGATGTGGGGAGGAAACTTACAGGGGCAGGGACGTTTaGAGGACATGTAATCCTTGGAGCAGAACAGCGGAGCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: VVEGCGEETYRGRDV*RTCNPWSRTAEPAC
Trigger: GCAGGCTGGCTCCGCTGTTCTGCTCCAAGGATTACATGTCCTTCAAACGTCCCTGCCCCTGTAAGTTTCCTCCCCACATCCTTCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569272.1
ENST00000618932.1
CDS GCA 90 bp GTTCCAGCAGAGCAGTTATGTTTGAGGAGTGAGTCCAGAGCGGCATaGTCTCGGCAGGGGCTCATCGGAAATCGTGGCTCAAGAGCAAGG +
Preference number: 5 (lower is better)
Translates to: VPAEQLCLRSESRAA*SRQGLIGNRGSRAR
Trigger: CCTTGCTCTTGAGCCACGATTTCCGATGAGCCCCTGCCGAGAGCATGCCGCTCTGGACTCACTCCTCAAACATAACTGCTCTGCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS CCA 90 bp ACCCAGCATGCCACATTAGCCTCTGGTTGGACCCCTGCAGTTCTTTaGCCAAACACCTCAAGCCGTTCTCTGCAGCTCGACTCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: TQHATLASGWTPAVL*PNTSSRSLQLDSKL
Trigger: GAGCTTGGAGTCGAGCTGCAGAGAACGGCTTGAGGTGTTTGGCCAAAGAACTGCAGGGGTCCAACCAGAGGCTAATGTGGCATGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS-3UTR CAA 90 bp TTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGGTGAGGGCCTCCAGTTaGCGCCTGAGACCCCAGACC +
Preference number: 5 (lower is better)
Translates to: LMEIAGVSWSRSEPAFLQVRASS*RLRPQT
Trigger: GGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCAC...CTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGATTTCCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp CTTCAGGAATCACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTGTGAGGGCCTCCAGTTaGCGCCTGAGACCCCAGACC +
Preference number: 5 (lower is better)
Translates to: LQESPLLPAWSLMEIAGVVRASS*RLRPQT
Trigger: GGTCTGGGGTCTCAGGCGCAAACTGGAGGCCCTCAC...AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGTGATTCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATAGCCTTCTGGTCCTCTaGTGGTGGCAAGGTGGTATT +
Preference number: 5 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHSLLVL*WWQGGI
Trigger: AATACCACCTTGCCACCACAAGAGGACCAGAAGGCT...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp CTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTTTACCTGCGTGGTCTTaGATGGAAATCGCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: LPWNREIGTAHNGTSLGPLPAWS*MEIAGV
Trigger: AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAA...AGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp AGGCAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGATTGTTGCTTATTCATaGCCTAGTCCAGGAACAAGA +
Preference number: 5 (lower is better)
Translates to: RQGLREGPLLCLREVPRQIVAYS*PSPGTR
Trigger: TCTTGTTCCTGGACTAGGCAATGAATAAGCAACAAT...CTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp GAGCTGTGCCTGCTGTGGGTCCTAGCGAGTTTCTCTGTGCCCGGCTCAAGCATCAGGATGGCGTCCAGTTaGTGTCTGGAAAGCATAGAT +
Preference number: 5 (lower is better)
Translates to: ELCLLWVLASFSVPGSSIRMASS*CLESID
Trigger: ATCTATGCTTTCCAGACACAAACTGGACGCCATCCT...GATGCTTGAGCCGGGCACAGAGAAACTCGCTAGGACCCACAGCAGGCACAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CAA 90 bp GAGCCACTGGGGAGGCTGTTGGGGGCTGTTGAGACCTCAGATGGGCTCAGAGCCTTGAACACCATCTGCTaGACATTCTCTTTGCTGATG +
Preference number: 5 (lower is better)
Translates to: EPLGRLLGAVETSDGLRALNTIC*TFSLLM
Trigger: CATCAGCAAAGAGAATGTCAAGCAGATGGTGTTCAA...GGCTCTGAGCCCATCTGAGGTCTCAACAGCCCCCAACAGCCTCCCCAGTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562146.1
CDS-3UTR CAA 90 bp CGCCCTCTTCTGGGCGATGCCTGTTGCTTGTGTGTGGCAGCAGCTGCTGGAGCCCTCATTTCAGTTTCATaGCCACTTTCCTCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: RPLLGDACCLCVAAAAGALISVS*PLSSLS
Trigger: GGAAAGAGAGGAAAGTGGCAATGAAACTGAAATGAG...GGCTCCAGCAGCTGCTGCCACACACAAGCAACAGGCATCGCCCAGAAGAGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS TCA 90 bp CGGCTCAAGCATCCGTGTGCCCGCGGTTCTGAGAACGGCTTCACATaGGACCCTCACCAGGAAGATCTTGAACACCATCTGCTTGACATT +
Preference number: 5 (lower is better)
Translates to: RLKHPCARGSENGFT*DPHQEDLEHHLLDI
Trigger: AATGTCAAGCAGATGGTGTTCAAGATCTTCCTGGTGAGGGTCTCATGTGAAGCCGTTCTCAGAACCGCGGGCACACGGATGCTTGAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4
CDS-3UTR CAA 90 bp CGTTCCGTGAAACCTTTGCAGGTGGGTTTTGTGTTTGTGGTAGGCCTGTATGTGGGCAGGCAGCTGACCTaGGATGGTCCAGCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: RSVKPLQVGFVFVVGLYVGRQLT*DGPAVS
Trigger: GGAAACTGCTGGACCATCCAAGGTCAGCTGCCTGCC...CACATACAGGCCTACCACAAACACAAAACCCACCTGCAAAGGTTTCACGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299694.12
ENST00000536005.7
CDS-3UTR CAA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGACTGCTCAGAGATGCTaGGCTGCCACCCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKTAQRC*AATLCG
Trigger: CCCACAGAGGGTGGCAGCCAAGCATCTCTGAGCAGT...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp CCAGACCCAGGTCCCCCACCTTGTAAGTGGCAGGGTGGTGATGTTGTGGCTCATAGTCTTAGCCCTTCATaGGAGGAACAGAAATGTGGG +
Preference number: 5 (lower is better)
Translates to: PDPGPPPCKWQGGDVVAHSLSPS*EEQKCG
Trigger: CCCACATTTCTGTTCCTCCAATGAAGGGCTAAGACT...ATGAGCCACAACATCACCACCCTGCCACTTACAAGGTGGGGGACCTGGGTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp CAGGGACTGAGGGAGGGGCCACTTCTCTGCCTCAGAGAGGTGCCCAGGCAGCACACAGACAGATATTTTTaGCCTAGAAAACAGTACACC +
Preference number: 5 (lower is better)
Translates to: QGLREGPLLCLREVPRQHTDRYF*PRKQYT
Trigger: GGTGTACTGTTTTCTAGGCAAAAAATATCTGTCTGT...GTGCTGCCTGGGCACCTCTCTGAGGCAGAGAAGTGGCCCCTCCCTCAGTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp TTGCCACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTGCTACAAGCCAGCCCAAGCCATGGTGTaGTGGAGGGCATGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: LPLSSLSWWYKPSGCYKPAQAMV*WRAWKG
Trigger: TCCTTTCCATGCCCTCCACAACACCATGGCTTGGGC...TGGCTTGTAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CAA 90 bp ACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGTGGGATCCTAAGTCTTaGTGGTGGGAGCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: TSSDDEAYCLSTAHAKSLWDPKS*WWELGV
Trigger: GACACCCAGCTCCCACCACAAAGACTTAGGATCCCA...CAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS GCA 90 bp CGATCCACACTTCGGGAAGGGCTGATACAGAAGAATGGGCCAAAGTaGGATTTTCAGTTCTCAGGGAGCATCTTGCAGACGTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: RSTLREGLIQKNGPK*DFQFSGSILQTSGV
Trigger: GACCCCTGACGTCTGCAAGATGCTCCCTGAGAACTGAAAATCGCACTTTGGCCCATTCTTCTGTATCAGCCCTTCCCGAAGTGTGGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS-3UTR CAA 90 bp TGTGGTGAAGCCACCTGGAGAAGGGCAATGGCCTCATCTTCCTTGAAGACCCTTAGCCTTCTGGTCCTCTaGTGGTGGCAAGGTGGTATT +
Preference number: 5 (lower is better)
Translates to: CGEATWRRAMASSSLKTLSLLVL*WWQGGI
Trigger: AATACCACCTTGCCACCACAAGAGGACCAGAAGGCT...AAGGGTCTTCAAGGAAGATGAGGCCATTGCCCTTCTCCAGGTGGCTTCACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp TCGCTGGGGTTTCTTGGTCAAGATCTGAGCCAGCCTTTCTGCAGCCAGGCTGACTCAAGATTGCCATCCTaGCCACTCCTCTGCTTAAGA +
Preference number: 5 (lower is better)
Translates to: SLGFLGQDLSQPFCSQADSRLPS*PLLCLR
Trigger: TCTTAAGCAGAGGAGTGGCAAGGATGGCAATCTTGA...GTCAGCCTGGCTGCAGAAAGGCTGGCTCAGATCTTGACCAAGAAACCCCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp ACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGTCTTCAGGGCCTGACTaGTTCACTTTGAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: TSSDDEAYCLSTAHAKSLSSGPD*FTLSSG
Trigger: GCCACTGCTCAAAGTGAACAAGTCAGGCCCTGAAGA...CAGGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CAA 90 bp AGTTTCATTGCCACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTGCTAGGCGATGCCTGTTGCTaGTGTGTGGCAGCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SFIATFLSFLVVQAIRVLGDACC*CVAAAA
Trigger: AGCAGCTGCTGCCACACACAAGCAACAGGCATCGCC...TAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTGGCAATGAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CAA 90 bp ACCTCTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGAGCCTTCTGGTCCTCTaGTGGTGGCAAGGTGGTATT +
Preference number: 5 (lower is better)
Translates to: TSVTCVVFDGNRWGFLVKSLLVL*WWQGGI
Trigger: AATACCACCTTGCCACCACAAGAGGACCAGAAGGCT...CTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp CTGCCCTGGAATCGAGAGATAGGCACAGCGCACAACGGAACCTCACTGGGGCCTACAGACAGATATTTTTaGCCTAGAAAACAGTACACC +
Preference number: 5 (lower is better)
Translates to: LPWNREIGTAHNGTSLGPTDRYF*PRKQYT
Trigger: GGTGTACTGTTTTCTAGGCAAAAAATATCTGTCTGT...AGGCCCCAGTGAGGTTCCGTTGTGCGCTGTGCCTATCTCTCGATTCCAGGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp CATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGAGGTGGAGAGTGCTGGTGGGTATaGTGTTTCAAGGTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: HGWTPSLWKFLHSFPGGGECWWV*CFKVRG
Trigger: TCCTCTCACCTTGAAACACAATACCCACCAGCACTC...TCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CAA 90 bp GGCACTAGTGTGTGTGCACCAAAGCTGTCTGAGCAAATGTCCACGAAACCACAGTATGTGCATGTGGGCTaGGCCAGTGTGACAATGGAT +
Preference number: 5 (lower is better)
Translates to: GTSVCAPKLSEQMSTKPQYVHVG*ASVTMD
Trigger: ATCCATTGTCACACTGGCCAAGCCCACATGCACATA...CTGTGGTTTCGTGGACATTTGCTCAGACAGCTTTGGTGCACACACACTAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CAA 90 bp AGTTTCATTGCCACTTTCCTCTCTTTCCTGGTGGTACAAGCCATCAGGGTGCTAAGTCAGGTCCTGAAGTaGATGGCCCATCCTCATGAC +
Preference number: 5 (lower is better)
Translates to: SFIATFLSFLVVQAIRVLSQVLK*MAHPHD
Trigger: GTCATGAGGATGGGCCATCAACTTCAGGACCTGACT...TAGCACCCTGATGGCTTGTACCACCAGGAAAGAGAGGAAAGTGGCAATGAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS TCA 90 bp ATTAACATCCCTCAGAGGAACTCCGATCCACACTTCGGGAAGGGCTaGTACAGAAGAATGGGCCAAAGTGCGATTTTCAGTTCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: INIPQRNSDPHFGKG*YRRMGQSAIFSSQG
Trigger: TCCCTGAGAACTGAAAATCGCACTTTGGCCCATTCTTCTGTATCAGCCCTTCCCGAAGTGTGGATCGGAGTTCCTCTGAGGGATGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS-3UTR CAA 90 bp CTGTTACCTGCGTGGTCTTTGATGGAAATCGCTGGGGTTTCTTGGTCAAGATCTTTACCTGCGTGGTCTTaGATGGAAATCGCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: LLPAWSLMEIAGVSWSRSLPAWS*MEIAGV
Trigger: AACCCCAGCGATTTCCATCAAAGACCACGCAGGTAA...AGATCTTGACCAAGAAACCCCAGCGATTTCCATCAAAGACCACGCAGGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp TCACTTCCTCAGACGATGAAGCTTACTGTCTCTCCACCGCTCATGCCAAGAGCCTGGACTATTCGAATTTaGGATTGCACCCCACTTTCA +
Preference number: 5 (lower is better)
Translates to: SLPQTMKLTVSPPLMPRAWTIRI*DCTPLS
Trigger: TGAAAGTGGGGTGCAATCCAAAATTCGAATAGTCCA...GGCTCTTGGCATGAGCGGTGGAGAGACAGTAAGCTTCATCGTCTGAGGAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CAA 90 bp GCATGTCGTGGATGGAGGAGCAGGAAAAGCCAAGAGCGTGACAGTCCCAAAGGCCCAAAAATGGAATACTaGAATGGGTTCAACCTCATA +
Preference number: 5 (lower is better)
Translates to: ACRGWRSRKSQERDSPKGPKMEY*NGFNLI
Trigger: TATGAGGTTGAACCCATTCAAGTATTCCATTTTTGG...GCCTTTGGGACTGTCACGCTCTTGGCTTTTCCTGCTCCTCCATCCACGACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CAA 90 bp CATGGCTGGACACCATCACTGTGGAAGTTTCTGCATTCATTCCCAGGAGGTGGAAATGTGCAAAGGACCTaGAATGTGGTGCCATATGTG +
Preference number: 5 (lower is better)
Translates to: HGWTPSLWKFLHSFPGGGNVQRT*NVVPYV
Trigger: CACATATGGCACCACATTCAAGGTCCTTTGCACATT...TCCACCTCCTGGGAATGAATGCAGAAACTTCCACAGTGATGGTGTCCAGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS-3UTR CAA 90 bp TGGATAGGAACAGCTGAGTGGGAGTGTCAGTGGCACTGGAGTATGCAACACCAACAATGGTGCTTAATCTaGAGAGGTAATGAATGGGTA +
Preference number: 5 (lower is better)
Translates to: WIGTAEWECQWHWSMQHQQWCLI*RGNEWV
Trigger: TACCCATTCATTACCTCTCAAGATTAAGCACCATTG...TTGGTGTTGCATACTCCAGTGCCACTGACACTCCCACTCAGCTGTTCCTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS TCA 90 bp TGTACATCTGCCCATATTCCCGGACTTTCTGGATCCAGCCATGCCTaGCTTGGACAATTCAGTAAGTATTCTTCCTTGCTCATGAAGATT +
Preference number: 5 (lower is better)
Translates to: CTSAHIPGLSGSSHA*LGQFSKYSSLLMKI
Trigger: AATCTTCATGAGCAAGGAAGAATACTTACTGAATTGTCCAAGTCAGGCATGGCTGGATCCAGAAAGTCCGGGAATATGGGCAGATGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566654.1
CDS-3UTR CAA 90 bp AGAAAGAGATTACTAAATAGTCTTAGCCCTTCATTGGAGGAACAGAAATGTGGGTCAAGATTGCCATCCTaGCCACTCCTCTGCTTAAGA +
Preference number: 5 (lower is better)
Translates to: RKRLLNSLSPSLEEQKCGSRLPS*PLLCLR
Trigger: TCTTAAGCAGAGGAGTGGCAAGGATGGCAATCTTGA...CCCACATTTCTGTTCCTCCAATGAAGGGCTAAGACTATTTAGTAATCTCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000562849.6
CDS-3UTR CAA 90 bp TGCTTAATCTTGAGAGGTAATGAATGGGTAGAGATTGCTAGCCGGAGGTGTATTTATTCGAATTTTGGATaGCACCCCACTTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: CLILRGNEWVEIASRRCIYSNFG*HPTFKA
Trigger: TGCCTTGAAAGTGGGGTGCAATCCAAAATTCGAATA...AATACACCTCCGGCTAGCAATCTCTACCCATTCATTACCTCTCAAGATTAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564819.5
CDS CCA 72 bp GCGAGAGTCAGCCGGGTGTGGGGTGGGCCCTGCCCCTaGGGAGCGGCGGCGGTGCCACTCAGCGCTGCGCAG +
Preference number: 6 (lower is better)
Translates to: ARVSRVWGGPCP*GAAAVPLSAAQ
Trigger: CTGCGCAGCGCTGAGTGGCACCGCCGCCGCTCCCCAGGGGCAGGGCCCACCCCACACCCGGCTGACTCTCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS TCA 72 bp GCGGCGGCGGTGCCACTCAGCGCTGCGCAGCCAGCCTaGGCTGCCTGCCGCCTCGCCTCGTACTCAGCCTCG +
Preference number: 6 (lower is better)
Translates to: AAAVPLSAAQPA*AACRLASYSAS
Trigger: CGAGGCTGAGTACGAGGCGAGGCGGCAGGCAGCTCAGGCTGGCTGCGCAGCGCTGAGTGGCACCGCCGCCGC
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS CCA 72 bp CTGCGCCCCGCCACCCACGCCGGCACCCGCCCGAGATaGACAGGGCAGTCCCTGGTCCTCACCGCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: LRPATHAGTRPR*TGQSLVLTALQ
Trigger: CTGGAGAGCGGTGAGGACCAGGGACTGCCCTGTCCATCTCGGGCGGGTGCCGGCGTGGGTGGCGGGGCGCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS TCA 72 bp CTCCTGCTGGTGTCGGCCAGGGCTGTGGCCGCTGCCTaGGTCGGAGGTGCCATCCAGCGTGGGGCAGGAATC +
Preference number: 6 (lower is better)
Translates to: LLLVSARAVAAA*VGGAIQRGAGI
Trigger: GATTCCTGCCCCACGCTGGATGGCACCTCCGACTCAGGCAGCGGCCACAGCCCTGGCCGACACCAGCAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS TCA 72 bp GTGCGGAGGGCGCGCTCTCTCTCCGACGCTCGGTGCTaGGACAGAGGCACGGAGACAGGGGCATACCCCAGG +
Preference number: 6 (lower is better)
Translates to: VRRARSLSDARC*DRGTETGAYPR
Trigger: CCTGGGGTATGCCCCTGTCTCCGTGCCTCTGTCTCAGCACCGAGCGTCGGAGAGAGAGCGCGCCCTCCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS GCA 72 bp GTAGCTGGTGCGGTTGTATCGTGCTATCGGCTTGGCTaGAGCGCTCCGCTCCGTGCGCCGCAGTGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: VAGAVVSCYRLG*SAPLRAPQCRL
Trigger: GAGCCGGCACTGCGGCGCACGGAGCGGAGCGCTGCAGCCAAGCCGATAGCACGATACAACCGCACCAGCTAC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000561796.5
ENST00000562849.6
CDS CAA 72 bp GGGAAGGGTGTCCATGGAGACCGTGTGAAGGCCACCTaGGGCCGGGGTCCTCTGCTCCTGCTGGTGTCGGCC +
Preference number: 6 (lower is better)
Translates to: GKGVHGDRVKAT*GRGPLLLLVSA
Trigger: GGCCGACACCAGCAGGAGCAGAGGACCCCGGCCCAAGGTGGCCTTCACACGGTCTCCATGGACACCCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS TCA 72 bp AGAACAGCGGAGCCAGCCTGCCCACGGGCACAGCTCTaGCTTCTCGCAGGGAAGGCCCCTCCACTCACCGCT +
Preference number: 6 (lower is better)
Translates to: RTAEPACPRAQL*LLAGKAPPLTA
Trigger: AGCGGTGAGTGGAGGGGCCTTCCCTGCGAGAAGTCAGAGCTGTGCCCGTGGGCAGGCTGGCTCCGCTGTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS CCA 72 bp AGAAGTAGCTGGTGCGGTTGTATCGTGCTATCGGCTTaGCTGCAGCGCTCCGCTCCGTGCGCCGCAGTGCCG +
Preference number: 6 (lower is better)
Translates to: RSSWCGCIVLSA*LQRSAPCAAVP
Trigger: CGGCACTGCGGCGCACGGAGCGGAGCGCTGCAGCCAAGCCGATAGCACGATACAACCGCACCAGCTACTTCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000561796.5
ENST00000562849.6
CDS CCA 72 bp CAGCGTGGGGCAGGAATCAGTCAGCGAGTAGGGTGGTaGTGCGTCCGTGGGGACATACAGCTGAGTGGCCCC +
Preference number: 6 (lower is better)
Translates to: QRGAGISQRVGW*CVRGDIQLSGP
Trigger: GGGGCCACTCAGCTGTATGTCCCCACGGACGCACCACCACCCTACTCGCTGACTGATTCCTGCCCCACGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS CCA 72 bp TGTGGCCGCTGCCTGAGTCGGAGGTGCCATCCAGCGTaGGGCAGGAATCAGTCAGCGAGTAGGGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: CGRCLSRRCHPA*GRNQSASRVVV
Trigger: CACCACCACCCTACTCGCTGACTGATTCCTGCCCCACGCTGGATGGCACCTCCGACTCAGGCAGCGGCCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS TCA 72 bp CTGCCGCCTCGCCTCGTACTCAGCCTCGGGTCCCTCTaGCAGCGCAAGGGAAAGTCTGTCCCAAAGTGGGAG +
Preference number: 6 (lower is better)
Translates to: LPPRLVLSLGSL*QRKGKSVPKWE
Trigger: CTCCCACTTTGGGACAGACTTTCCCTTGCGCTGTCAGAGGGACCCGAGGCTGAGTACGAGGCGAGGCGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS CCA 72 bp AGGAATCAGTCAGCGAGTAGGGTGGTGGTGCGTCCGTaGGGACATACAGCTGAGTGGCCCCTGGCCCCACAC +
Preference number: 6 (lower is better)
Translates to: RNQSASRVVVRP*GHTAEWPLAPH
Trigger: GTGTGGGGCCAGGGGCCACTCAGCTGTATGTCCCCACGGACGCACCACCACCCTACTCGCTGACTGATTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS TCA 72 bp AGAACAGCGGAGCCAGCCTGCCCACGGGCACAGCTCTaGCTTCTCGCAGGGAAGGCCCCTCCATTTCAGATG +
Preference number: 6 (lower is better)
Translates to: RTAEPACPRAQL*LLAGKAPPFQM
Trigger: CATCTGAAATGGAGGGGCCTTCCCTGCGAGAAGTCAGAGCTGTGCCCGTGGGCAGGCTGGCTCCGCTGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS CCA 72 bp ATCCAGCGTGGGGCAGGAATCAGTCAGCGAGTAGGGTaGTGGTGCGTCCGTGGGGACATACAGCTGAGTGGC +
Preference number: 6 (lower is better)
Translates to: IQRGAGISQRVG*WCVRGDIQLSG
Trigger: GCCACTCAGCTGTATGTCCCCACGGACGCACCACCACCCTACTCGCTGACTGATTCCTGCCCCACGCTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000562849.6
CDS CAA 72 bp CCTCTGAGGAGCTGCAGGCATAGCGCATCCTGCGGCTaGAGCGGCTGTATGTGTGCTCGTCCGACACGTAGC +
Preference number: 6 (lower is better)
Translates to: PLRSCRHSASCG*SGCMCARPTRS
Trigger: GCTACGTGTCGGACGAGCACACATACAGCCGCTCAAGCCGCAGGATGCGCTATGCCTGCAGCTCCTCAGAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000561796.5
ENST00000562849.6
ENST00000564819.5
ENST00000622872.4
CDS TCA 72 bp CTGTGCCCGGCTCAAGCATCCGTGTGCCCGCGGTTCTaGGAACGGCTTCACATGAGACCCTCACCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: LCPAQASVCPRF*ERLHMRPSPGR
Trigger: TCTTCCTGGTGAGGGTCTCATGTGAAGCCGTTCTCAGAACCGCGGGCACACGGATGCTTGAGCCGGGCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4
CDS GCA 72 bp GAATGTGGGGTAGAAGTAGCTGGTGCGGTTGTATCGTaGTATCGGCTTGGCTGCAGCGCTCCGCTCCGTGCG +
Preference number: 6 (lower is better)
Translates to: ECGVEVAGAVVS*YRLGCSAPLRA
Trigger: CGCACGGAGCGGAGCGCTGCAGCCAAGCCGATAGCACGATACAACCGCACCAGCTACTTCTACCCCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000561796.5
ENST00000562849.6
CDS GCA 72 bp CCGAGCTCTCTGAGAATGTGGGGTAGAAGTAGCTGGTaGGGTTGTATCGTGCTATCGGCTTGGCTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: PSSLRMWGRSSW*GCIVLSAWLQR
Trigger: GCGCTGCAGCCAAGCCGATAGCACGATACAACCGCACCAGCTACTTCTACCCCACATTCTCAGAGAGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000561796.5
ENST00000562849.6
CDS GCA 72 bp AGAACTCAGACTCCAAGGTGGCCGTGTAGCCCAGCCTaGCCAGGATGGCGTCCAGTTTGTGTCTGGAAAGCA +
Preference number: 6 (lower is better)
Translates to: RTQTPRWPCSPA*PGWRPVCVWKA
Trigger: TGCTTTCCAGACACAAACTGGACGCCATCCTGGGCAGGCTGGGCTACACGGCCACCTTGGAGTCTGAGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4
CDS CCA 72 bp CGAAGGGTCAAACTTCCTAGCTCAAAGGGGTGCGGGTaGGTTCAAACTCCAAACTCCGTGAAGCCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: RRVKLPSSKGCG*VQTPNSVKPQP
Trigger: GGGCTGGGGCTTCACGGAGTTTGGAGTTTGAACCCACCCGCACCCCTTTGAGCTAGGAAGTTTGACCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS CCA 72 bp TTGCCCTCTCCCCACCCAGCATGCCACATTAGCCTCTaGTTGGACCCCTGCAGTTCTTTGGCCAAACACCTC +
Preference number: 6 (lower is better)
Translates to: LPSPHPACHISL*LDPCSSLAKHL
Trigger: GAGGTGTTTGGCCAAAGAACTGCAGGGGTCCAACCAGAGGCTAATGTGGCATGCTGGGTGGGGAGAGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS CAA 90 bp CACCCAGCATGCCACATTAGCCTCTGGTTGGACCCCTGCAGTTCTTaGGCCAAACACCTCAAGCCGTTCTCTGCAGCTCGACTCCAAGCT +
Preference number: 6 (lower is better)
Translates to: HPACHISLWLDPCSS*AKHLKPFSAARLQA
Trigger: AGCTTGGAGTCGAGCTGCAGAGAACGGCTTGAGGTGTTTGGCCAAAGAACTGCAGGGGTCCAACCAGAGGCTAATGTGGCATGCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS TCA 72 bp GTCTCTCGTTCCAGCAGAGCAGTTATGTTTGAGGAGTaGGTCCAGAGCGGCATGCTCTCGGCAGGGGCTCAT +
Preference number: 6 (lower is better)
Translates to: VSRSSRAVMFEE*VQSGMLSAGAH
Trigger: ATGAGCCCCTGCCGAGAGCATGCCGCTCTGGACTCACTCCTCAAACATAACTGCTCTGCTGGAACGAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS GCA 72 bp GCTCGTCGAAGGGTCAAACTTCCTAGCTCAAAGGGGTaGGGGTGGGTTCAAACTCCAAACTCCGTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: ARRRVKLPSSKG*GWVQTPNSVKP
Trigger: GGGCTTCACGGAGTTTGGAGTTTGAACCCACCCGCACCCCTTTGAGCTAGGAAGTTTGACCCTTCGACGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS GCA 72 bp GAAATCGTGGCTCAAGAGCAAGGATCCCTGAACCCCTaGCTCTCACACCAGTTACTTGCGCCCTCCCTTTCC +
Preference number: 6 (lower is better)
Translates to: EIVAQEQGSLNP*LSHQLLAPSLS
Trigger: GGAAAGGGAGGGCGCAAGTAACTGGTGTGAGAGGCAGGGGTTCAGGGATCCTTGCTCTTGAGCCACGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS GCA 72 bp GAGCAGTTATGTTTGAGGAGTGAGTCCAGAGCGGCATaGTCTCGGCAGGGGCTCATCGGAAATCGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: EQLCLRSESRAA*SRQGLIGNRGS
Trigger: TGAGCCACGATTTCCGATGAGCCCCTGCCGAGAGCATGCCGCTCTGGACTCACTCCTCAAACATAACTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569272.1
CDS CCA 72 bp GCTCCGAGCTCTCTGAGAATGTGGGGTAGAAGTAGCTaGTGCGGTTGTATCGTGCTATCGGCTTGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: APSSLRMWGRSS*CGCIVLSAWLQ
Trigger: CTGCAGCCAAGCCGATAGCACGATACAACCGCACCAGCTACTTCTACCCCACATTCTCAGAGAGCTCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299694.12
ENST00000561796.5
ENST00000562849.6
CDS CCA 72 bp GCTCCGAGCTCTCTGAGAATGTGGGGTAGAAGTAGCTaGTGCGGTTGTATCGTGCTAAGGGGCAGGGACGTT +
Preference number: 6 (lower is better)
Translates to: APSSLRMWGRSS*CGCIVLRGRDV
Trigger: AACGTCCCTGCCCCTTAGCACGATACAACCGCACCAGCTACTTCTACCCCACATTCTCAGAGAGCTCGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000622872.4
CDS CCA 72 bp GCCACATTAGCCTCTGGTTGGACCCCTGCAGTTCTTTaGCCAAACACCTCAAGCCGTTCTCTGCAGCTCGAC +
Preference number: 6 (lower is better)
Translates to: ATLASGWTPAVL*PNTSSRSLQLD
Trigger: GTCGAGCTGCAGAGAACGGCTTGAGGTGTTTGGCCAAAGAACTGCAGGGGTCCAACCAGAGGCTAATGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS TCA 72 bp CTGCTTGACATTCTCTTTGCTGATGGCCTGGACCAGTaGGAACTCAGACTCCAAGGTGGCCGTGTAGCCCAG +
Preference number: 6 (lower is better)
Translates to: LLDILFADGLDQ*ELRLQGGRVAQ
Trigger: CTGGGCTACACGGCCACCTTGGAGTCTGAGTTCTCACTGGTCCAGGCCATCAGCAAAGAGAATGTCAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4
CDS TCA 72 bp CATCCGTGTGCCCGCGGTTCTGAGAACGGCTTCACATaGGACCCTCACCAGGAAGATCTTGAACACCATCTG +
Preference number: 6 (lower is better)
Translates to: HPCARGSENGFT*DPHQEDLEHHL
Trigger: CAGATGGTGTTCAAGATCTTCCTGGTGAGGGTCTCATGTGAAGCCGTTCTCAGAACCGCGGGCACACGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4
CDS GCA 72 bp CAGAGTGGCAGGGAGTGGAGGGTCCTTTTCAAGGGATaGTCTTCTACTCCACCACACAGTTCAGATGGTGCC +
Preference number: 6 (lower is better)
Translates to: QSGREWRVLFKG*SSTPPHSSDGA
Trigger: GGCACCATCTGAACTGTGTGGTGGAGTAGAAGAGCATCCCTTGAAAAGGACCCTCCACTCCCTGCCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566654.1
CDS GCA 72 bp CACCCAGCATGCCACATTAGCCTCTGGTTGGACCCCTaGAGTTCTTTGGCCAAACACCTCAAGCCGTTCTCT +
Preference number: 6 (lower is better)
Translates to: HPACHISLWLDP*SSLAKHLKPFS
Trigger: AGAGAACGGCTTGAGGTGTTTGGCCAAAGAACTGCAGGGGTCCAACCAGAGGCTAATGTGGCATGCTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS CCA 72 bp CGAGCAGATGGCTGTGCTCCGAGCTCTCTGAGAATGTaGGGTAGAAGTAGCTGGTGCGGTTGTATCGTGCTA +
Preference number: 6 (lower is better)
Translates to: RADGCAPSSLRM*GRSSWCGCIVL
Trigger: TAGCACGATACAACCGCACCAGCTACTTCTACCCCACATTCTCAGAGAGCTCGGAGCACAGCCATCTGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299694.12
ENST00000536005.7
ENST00000561796.5
ENST00000562849.6
ENST00000622872.4
CDS CAA 72 bp TGCCACATTAGCCTCTGGTTGGACCCCTGCAGTTCTTaGGCCAAACACCTCAAGCCGTTCTCTGCAGCTCGA +
Preference number: 6 (lower is better)
Translates to: CHISLWLDPCSS*AKHLKPFSAAR
Trigger: TCGAGCTGCAGAGAACGGCTTGAGGTGTTTGGCCAAAGAACTGCAGGGGTCCAACCAGAGGCTAATGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS TCA 72 bp TGGTGCGGTTGTATCGTGCTAAGGGGCAGGGACGTTTaGAGGACATGTAATCCTTGGAGCAGAACAGCGGAG +
Preference number: 6 (lower is better)
Translates to: WCGCIVLRGRDV*RTCNPWSRTAE
Trigger: CTCCGCTGTTCTGCTCCAAGGATTACATGTCCTTCAAACGTCCCTGCCCCTTAGCACGATACAACCGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536005.7
ENST00000622872.4
CDS TCA 72 bp GGATGTGGGGAGGAAACTTACAGGGGCAGGGACGTTTaGAGGACATGTAATCCTTGGAGCAGAACAGCGGAG +
Preference number: 6 (lower is better)
Translates to: GCGEETYRGRDV*RTCNPWSRTAE
Trigger: CTCCGCTGTTCTGCTCCAAGGATTACATGTCCTTCAAACGTCCCTGCCCCTGTAAGTTTCCTCCCCACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569272.1
ENST00000618932.1
CDS CCA 72 bp AACACCATCTGCTTGACATTCTCTTTGCTGATGGCCTaGACCAGTGAGAACTCAGACTCCAAGGTGGCCGTG +
Preference number: 6 (lower is better)
Translates to: NTICLTFSLLMA*TSENSDSKVAV
Trigger: CACGGCCACCTTGGAGTCTGAGTTCTCACTGGTCCAGGCCATCAGCAAAGAGAATGTCAAGCAGATGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4
CDS CAA 90 bp ACCCTCACCAGGAAGATCTTGAACACCATCTGCTTGACATTCTCTTaGCTGATGGCCTGGACCAGTGAGAACTCAGACTCCAAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: TLTRKILNTICLTFS*LMAWTSENSDSKVA
Trigger: GGCCACCTTGGAGTCTGAGTTCTCACTGGTCCAGGCCATCAGCAAAGAGAATGTCAAGCAGATGGTGTTCAAGATCTTCCTGGTGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4
CDS CAA 90 bp GCGGTTCTGAGAACGGCTTCACATGAGACCCTCACCAGGAAGATCTaGAACACCATCTGCTTGACATTCTCTTTGCTGATGGCCTGGACC +
Preference number: 6 (lower is better)
Translates to: AVLRTASHETLTRKI*NTICLTFSLLMAWT
Trigger: GGTCCAGGCCATCAGCAAAGAGAATGTCAAGCAGATGGTGTTCAAGATCTTCCTGGTGAGGGTCTCATGTGAAGCCGTTCTCAGAACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4
CDS TCA 72 bp CCTCAGAGGAACTCCGATCCACACTTCGGGAAGGGCTaGTACAGAAGAATGGGCCAAAGTGCGATTTTCAGT +
Preference number: 6 (lower is better)
Translates to: PQRNSDPHFGKG*YRRMGQSAIFS
Trigger: ACTGAAAATCGCACTTTGGCCCATTCTTCTGTATCAGCCCTTCCCGAAGTGTGGATCGGAGTTCCTCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618932.1
CDS CCA 72 bp TTGCAGTTGGATAATGAGGCTCAGAGTGGCAGGGAGTaGAGGGTCCTTTTCAAGGGATGCTCTTCTACTCCA +
Preference number: 6 (lower is better)
Translates to: LQLDNEAQSGRE*RVLFKGCSSTP
Trigger: TGGAGTAGAAGAGCATCCCTTGAAAAGGACCCTCCACTCCCTGCCACTCTGAGCCTCATTATCCAACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566654.1
CDS CAA 72 bp GAGACCCTCACCAGGAAGATCTTGAACACCATCTGCTaGACATTCTCTTTGCTGATGGCCTGGACCAGTGAG +
Preference number: 6 (lower is better)
Translates to: ETLTRKILNTIC*TFSLLMAWTSE
Trigger: CTCACTGGTCCAGGCCATCAGCAAAGAGAATGTCAAGCAGATGGTGTTCAAGATCTTCCTGGTGAGGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4
CDS CAA 90 bp GCTTCACATGAGACCCTCACCAGGAAGATCTTGAACACCATCTGCTaGACATTCTCTTTGCTGATGGCCTGGACCAGTGAGAACTCAGAC +
Preference number: 6 (lower is better)
Translates to: ASHETLTRKILNTIC*TFSLLMAWTSENSD
Trigger: GTCTGAGTTCTCACTGGTCCAGGCCATCAGCAAAGAGAATGTCAAGCAGATGGTGTTCAAGATCTTCCTGGTGAGGGTCTCATGTGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4
CDS TCA 72 bp GCCCATATTCCCGGACTTTCTGGATCCAGCCATGCCTaGCTTGGACAATTCAGTAAGTATTCTTCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: AHIPGLSGSSHA*LGQFSKYSSLL
Trigger: GAGCAAGGAAGAATACTTACTGAATTGTCCAAGTCAGGCATGGCTGGATCCAGAAAGTCCGGGAATATGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566654.1
CDS CAA 72 bp AGGAAGATCTTGAACACCATCTGCTTGACATTCTCTTaGCTGATGGCCTGGACCAGTGAGAACTCAGACTCC +
Preference number: 6 (lower is better)
Translates to: RKILNTICLTFS*LMAWTSENSDS
Trigger: GGAGTCTGAGTTCTCACTGGTCCAGGCCATCAGCAAAGAGAATGTCAAGCAGATGGTGTTCAAGATCTTCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4
CDS GCA 72 bp CTTGCTCATGAAGATTCAAGTTGGGTTTCTGACTCTTaGAGTTGGATAATGAGGCTCAGAGTGGCAGGGAGT +
Preference number: 6 (lower is better)
Translates to: LAHEDSSWVSDS*SWIMRLRVAGS
Trigger: ACTCCCTGCCACTCTGAGCCTCATTATCCAACTGCAAGAGTCAGAAACCCAACTTGAATCTTCATGAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566654.1
CDS CAA 72 bp AGAACGGCTTCACATGAGACCCTCACCAGGAAGATCTaGAACACCATCTGCTTGACATTCTCTTTGCTGATG +
Preference number: 6 (lower is better)
Translates to: RTASHETLTRKI*NTICLTFSLLM
Trigger: CATCAGCAAAGAGAATGTCAAGCAGATGGTGTTCAAGATCTTCCTGGTGAGGGTCTCATGTGAAGCCGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561796.5
ENST00000562146.1
ENST00000563075.1
ENST00000566654.1
ENST00000622872.4