Pregenerated sensors for BDH2 (Homo sapiens)
Ensembl gene IDs: ENSG00000164039Ensembl transcript IDs: ENST00000296424.9, ENST00000464039.5, ENST00000475058.5, ENST00000492366.5, ENST00000504285.5, ENST00000509245.1, ENST00000511354.5
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATGGACAAAACTGCAGCCTCAGCTACTTTGAAGGCTGAGGCAAGAGGACCACTTAGTTTTAGGATGCAGTaGGCTATGATCATTCCACTG | + |
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Preference number: 2 (lower is better) Translates to: MDKTAASATLKAEARGPLSFRMQ*AMIIPL Trigger: CAGTGGAATGATCATAGCTCACTGCATCCTAAAACT...AAGTGGTCCTCTTGCCTCAGCCTTCAAAGTAGCTGAGGCTGCAGTTTTGTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511354.5 |
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| 3UTR-3UTR TCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTTATAGCAGCCCAAAGTaGCTAAGACAGATGCTAACA | + |
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Preference number: 2 (lower is better) Translates to: SAGTFILHFLASRLKNKCYSSPK*LRQMLT Trigger: TGTTAGCATCTGTCTTAGTCACTTTGGGCTGCTATA...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| 3UTR GCA 72 bp | CAAACCAGGAAGTGGGCCCTAACCAGAAACTATATCTaGTGGCACCTTTATCTTGCACTTCCTAGCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: QTRKWALTRNYI*WHLYLALPSLQ Trigger: CTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGATATAGTTTCTGGTTAGGGCCCACTTCCTGGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| 3UTR CCA 72 bp | ACCAGGAAGTGGGCCCTAACCAGAAACTATATCTGCTaGCACCTTTATCTTGCACTTCCTAGCCTCCAGACT | + |
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Preference number: 3 (lower is better) Translates to: TRKWALTRNYIC*HLYLALPSLQT Trigger: AGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGATATAGTTTCTGGTTAGGGCCCACTTCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| 3UTR CCA 72 bp | ACCAGAAAACTAAAATCCAAGATAGATTGGGTGACTTaGTCTAGATCACAAACCAAAGTTAGCCATAATTCG | + |
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Preference number: 3 (lower is better) Translates to: TRKLKSKIDWVT*SRSQTKVSHNS Trigger: CGAATTATGGCTAACTTTGGTTTGTGATCTAGACCAAGTCACCCAATCTATCTTGGATTTTAGTTTTCTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR CCA 90 bp | ATGGACAAAACTGCAGCCTCAGCTACTTTGAAGGCTGAGGCAAGAGGACCACTTCACTGCCCTCTAGCCTaGGGAACCAAGACAAACCCC | + |
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Preference number: 4 (lower is better) Translates to: MDKTAASATLKAEARGPLHCPLA*GTKTNP Trigger: GGGGTTTGTCTTGGTTCCCCAGGCTAGAGGGCAGTG...AAGTGGTCCTCTTGCCTCAGCCTTCAAAGTAGCTGAGGCTGCAGTTTTGTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511354.5 |
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| CDS-3UTR TCA 90 bp | ATGGACAAAACTGCAGCCTCAGCTACTTTGAAGGCTGAGGCAAGAGGACCACTTTCAAGGACACGAGTTTaGATACCCGGGTACTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: MDKTAASATLKAEARGPLSRTRV*IPGYFS Trigger: GGAAAAGTACCCGGGTATTCAAACTCGTGTCCTTGA...AAGTGGTCCTCTTGCCTCAGCCTTCAAAGTAGCTGAGGCTGCAGTTTTGTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511354.5 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTCTGGTCCTGAACTCCTaGCCGCAAGTGATCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCLVLNS*PQVILL Trigger: CAGGAGGATCACTTGCGGCCAGGAGTTCAGGACCAG...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR TCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTTGGAGTGCAGTGGCATaGTTACAGCTCACTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCWSAVA*LQLTAA Trigger: GGCTGCAGTGAGCTGTAATCATGCCACTGCACTCCA...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTAAGAAGAGGACCATCTaGAAACCAGGAAGTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCKKRTI*KPGSGP Trigger: GGGCCCACTTCCTGGTTTGCAGATGGTCCTCTTCTT...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTTTAGGTACAGGGTCTTaGTCTGTCACCCTGGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCLGTGS*SVTLEC Trigger: GCACTCCAGGGTGACAGAGCAAGACCCTGTACCTAA...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR TCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTTGTTCACAACTCCTTTaGCGCTGGAAGCCACAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCCSQLL*RWKPQK Trigger: CTTCTGTGGCTTCCAGCGTCAAAGGAGTTGTGAACA...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR TCA 90 bp | AGTTCCATGATGGACAAAACTGCAGCCTCAGCTACTTTGAAGGCTGAGGCAAGAAGTTTTAGGATGCAGTaGGCTATGATCATTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: SSMMDKTAASATLKAEARSFRMQ*AMIIPL Trigger: CAGTGGAATGATCATAGCTCACTGCATCCTAAAACT...TCTTGCCTCAGCCTTCAAAGTAGCTGAGGCTGCAGTTTTGTCCATCATGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511354.5 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTTCTGTCACCCTGGAGTaGAGTGGCATGATTACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCSVTLE*SGMITA Trigger: AGCTGTAATCATGCCACTGCACTCCAGGGTGACAGA...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR GCA 90 bp | AGTTCCATGATGGACAAAACTGCAGCCTCAGCTACTTTGAAGGCTGAGGCAAGACATGATGGACAAAACTaGAGCCTCAGCTACTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SSMMDKTAASATLKAEARHDGQN*SLSYFE Trigger: TTCAAAGTAGCTGAGGCTGCAGTTTTGTCCATCATG...TCTTGCCTCAGCCTTCAAAGTAGCTGAGGCTGCAGTTTTGTCCATCATGGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511354.5 |
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| CDS-3UTR TCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTTCAAGGACACGAGTTTaGATACCCGGGTACTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCSRTRV*IPGYFS Trigger: GGAAAAGTACCCGGGTATTCAAACTCGTGTCCTTGA...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR TCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTTCTGCTCTTGCTATGTaGGGATACAGCAAGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCSALAM*GYSKKR Trigger: CCTCTTCTTGCTGTATCCTCACATAGCAAGAGCAGA...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR TCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTAGGGTAGTGCCCTCATaGACAGGATTAGTGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCRVVPS*TGLVSL Trigger: TAAGGACACTAATCCTGTTCATGAGGGCACTACCCT...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTATGATTACAGCTCACTaGAGCCTCAAACTCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCMITAH*SLKLLG Trigger: GCCCAAGAGTTTGAGGCTGCAGTGAGCTGTAATCAT...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTCTGCAAACCAGGAAGTaGGCCCTAACCAGAAACTAT | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCLQTRK*ALTRNY Trigger: ATAGTTTCTGGTTAGGGCCCACTTCCTGGTTTGCAG...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTCAGGAAATCATTCCGTaGCTCTTCAGGATTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCQEIIP*LFRISS Trigger: AGAGGAAATCCTGAAGAGGCACGGAATGATTTCCTG...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTAGGCATGAGCTACCATaGCTAGTCCTGAAATTACTA | + |
|
Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCRHELP*LVLKLL Trigger: TAGTAATTTCAGGACTAGGCATGGTAGCTCATGCCT...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR TCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTTCACTGCACATTTATTaGGTATCTCAGTGTGCATCA | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCSLHIY*VSQCAS Trigger: TGATGCACACTGAGATACTCAATAAATGTGCAGTGA...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTTTGTATATGCTGCAATaGCCTATTTGTATCACCCCA | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCLYMLQ*PICITP Trigger: TGGGGTGATACAAATAGGCCATTGCAGCATATACAA...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTGTGCATCATACCATTTaGTCATTTGAGGTTGCAACA | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCVHHTI*SFEVAT Trigger: TGTTGCAACCTCAAATGACCAAATGGTATGATGCAC...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTAGAAACTATATCTGCTaGCACCTTTATCTTGCACTT | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCRNYIC*HLYLAL Trigger: AAGTGCAAGATAAAGGTGCCAGCAGATATAGTTTCT...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTAAATCCAAGATAGATTaGGTGACTTGGTCTAGATCA | + |
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Preference number: 4 (lower is better) Translates to: SAGTFILHFLASRLKNKCKSKID*VTWSRS Trigger: TGATCTAGACCAAGTCACCCAATCTATCTTGGATTT...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS TCA 90 bp | GGTTTCCTTCTTTTCCTCCCTCGCGGGTGGACTTGCATCGAGGTCTaGTGGCTCTCACAGCCTTACCTAGTTCTCTCCTCATTCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: GFLLFLPRGWTCIEV*WLSQPYLVLSSFSL Trigger: GAGAGAGAATGAGGAGAGAACTAGGTAAGGCTGTGAGAGCCATCAGACCTCGATGCAAGTCCACCCGCGAGGGAGGAAAAGAAGGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464039.5 ENST00000509245.1 |
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| CDS TCA 90 bp | GCTATGCCTGTTCCCAAACGCAGAGCTCTTAATGATGTGCGTGTATaGGCATCGCAGTCCTCGGAAGGAGACAGACCCACCTTTGACGCT | + |
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Preference number: 5 (lower is better) Translates to: AMPVPKRRALNDVRV*ASQSSEGDRPTFDA Trigger: AGCGTCAAAGGTGGGTCTGTCTCCTTCCGAGGACTGCGATGCTCATACACGCACATCATTAAGAGCTCTGCGTTTGGGAACAGGCATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000464039.5 ENST00000475058.5 ENST00000492366.5 |
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| CDS CCA 90 bp | AGTTCTCTTAGACTGCACAGCTGTCTGGGATGCTTCCACTCAACCTaGTTTCCTTCTTTTCCTCCCTCGCGGGTGGACTTGCATCGAGGT | + |
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Preference number: 5 (lower is better) Translates to: SSLRLHSCLGCFHST*FPSFPPSRVDLHRG Trigger: ACCTCGATGCAAGTCCACCCGCGAGGGAGGAAAAGAAGGAAACCAGGTTGAGTGGAAGCATCCCAGACAGCTGTGCAGTCTAAGAGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464039.5 ENST00000509245.1 |
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| CDS-3UTR CAA 90 bp | ATGATGGACAAAACTGCAGCCTCAGCTACTTTGAAGGCTGAGGCAAGAGGACCAGCAGCCTCAGCTACTTaGAAGGCTGAGGCAAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: MMDKTAASATLKAEARGPAASAT*KAEARG Trigger: TCCTCTTGCCTCAGCCTTCAAAGTAGCTGAGGCTGC...TGGTCCTCTTGCCTCAGCCTTCAAAGTAGCTGAGGCTGCAGTTTTGTCCATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511354.5 |
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| CDS-3UTR CAA 90 bp | AGTTCCATGATGGACAAAACTGCAGCCTCAGCTACTTTGAAGGCTGAGGCAAGAAGGCAAGAGGACCACTaGAGCCCAGGAGTTTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: SSMMDKTAASATLKAEARRQEDH*SPGVLG Trigger: TCCTAAAACTCCTGGGCTCAAGTGGTCCTCTTGCCT...TCTTGCCTCAGCCTTCAAAGTAGCTGAGGCTGCAGTTTTGTCCATCATGGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511354.5 |
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| CDS-3UTR CAA 90 bp | AGTTCCATGATGGACAAAACTGCAGCCTCAGCTACTTTGAAGGCTGAGGCAAGACTTTGGCACCTTCTCTaGCAAAAGCTAAGGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SSMMDKTAASATLKAEARLWHLL*QKLRQL Trigger: CAGCTGCCTTAGCTTTTGCAAGAGAAGGTGCCAAAG...TCTTGCCTCAGCCTTCAAAGTAGCTGAGGCTGCAGTTTTGTCCATCATGGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511354.5 |
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| CDS GCA 90 bp | TATGGCCCTGTAAAGCCTCCAGTCAAAGGTTTTGCTAGGAATCTTTaGCAACCGAAGAAGCACTTCCAGAACAAATGCCGAAGCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: YGPVKPPVKGFARNL*QPKKHFQNKCRSTE Trigger: CTCTGTGCTTCGGCATTTGTTCTGGAAGTGCTTCTTCGGTTGGCAAAGATTCCTAGCAAAACCTTTGACTGGAGGCTTTACAGGGCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464039.5 |
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| CDS-3UTR CAA 90 bp | ATGGACAAAACTGCAGCCTCAGCTACTTTGAAGGCTGAGGCAAGAGGACCACTTATCAAGGACACGAGTTaGAATACCCGGGTACTTTTC | + |
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Preference number: 5 (lower is better) Translates to: MDKTAASATLKAEARGPLIKDTS*NTRVLF Trigger: GAAAAGTACCCGGGTATTCAAACTCGTGTCCTTGAT...AAGTGGTCCTCTTGCCTCAGCCTTCAAAGTAGCTGAGGCTGCAGTTTTGTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000511354.5 |
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| CDS-3UTR CAA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTCTTTGGCACCTTCTCTaGCAAAAGCTAAGGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SAGTFILHFLASRLKNKCLWHLL*QKLRQL Trigger: CAGCTGCCTTAGCTTTTGCAAGAGAAGGTGCCAAAG...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR CAA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTCTGTTCACAACTCCTTaGACGCTGGAAGCCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: SAGTFILHFLASRLKNKCLFTTP*TLEATE Trigger: TTCTGTGGCTTCCAGCGTCAAAGGAGTTGTGAACAG...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS TCA 90 bp | CCACATTTTGTACTGCTGTCCTTGTCCTTCAACTTGACTTCTTGCTaGTGGCTCAGATCAACTGTCTTTGTGAAGCATTCCACAAACTCA | + |
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Preference number: 5 (lower is better) Translates to: PHFVLLSLSFNLTSC*WLRSTVFVKHSTNS Trigger: TGAGTTTGTGGAATGCTTCACAAAGACAGTTGATCTGAGCCATCAGCAAGAAGTCAAGTTGAAGGACAAGGACAGCAGTACAAAATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000464039.5 ENST00000475058.5 ENST00000492366.5 |
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| CDS-3UTR CAA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTATCAAGGACACGAGTTaGAATACCCGGGTACTTTTC | + |
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Preference number: 5 (lower is better) Translates to: SAGTFILHFLASRLKNKCIKDTS*NTRVLF Trigger: GAAAAGTACCCGGGTATTCAAACTCGTGTCCTTGAT...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS-3UTR CAA 90 bp | TCTGCTGGCACCTTTATCTTGCACTTCCTAGCCTCCAGACTGAAAAATAAATGTATCACTGCACATTTATaGAGTATCTCAGTGTGCATC | + |
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Preference number: 5 (lower is better) Translates to: SAGTFILHFLASRLKNKCITAHL*SISVCI Trigger: GATGCACACTGAGATACTCAATAAATGTGCAGTGAT...ACATTTATTTTTCAGTCTGGAGGCTAGGAAGTGCAAGATAAAGGTGCCAGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296424.9 |
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| CDS CCA 72 bp | AGACTGCACAGCTGTCTGGGATGCTTCCACTCAACCTaGTTTCCTTCTTTTCCTCCCTCGCGGGTGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: RLHSCLGCFHST*FPSFPPSRVDL Trigger: CAAGTCCACCCGCGAGGGAGGAAAAGAAGGAAACCAGGTTGAGTGGAAGCATCCCAGACAGCTGTGCAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464039.5 ENST00000509245.1 |
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| CDS CAA 72 bp | ACCTGGTTTCCTTCTTTTCCTCCCTCGCGGGTGGACTaGCATCGAGGTCTGATGGCTCTCACAGCCTTACCT | + |
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Preference number: 6 (lower is better) Translates to: TWFPSFPPSRVD*HRGLMALTALP Trigger: AGGTAAGGCTGTGAGAGCCATCAGACCTCGATGCAAGTCCACCCGCGAGGGAGGAAAAGAAGGAAACCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464039.5 ENST00000509245.1 |
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| CDS TCA 72 bp | GTTCCCAAACGCAGAGCTCTTAATGATGTGCGTGTATaGGCATCGCAGTCCTCGGAAGGAGACAGACCCACC | + |
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Preference number: 6 (lower is better) Translates to: VPKRRALNDVRV*ASQSSEGDRPT Trigger: GGTGGGTCTGTCTCCTTCCGAGGACTGCGATGCTCATACACGCACATCATTAAGAGCTCTGCGTTTGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000464039.5 ENST00000475058.5 ENST00000492366.5 |
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| CDS GCA 72 bp | CTATGCCTGTTCCCAAACGCAGAGCTCTTAATGATGTaGGTGTATGAGCATCGCAGTCCTCGGAAGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: LCLFPNAELLMM*VYEHRSPRKET Trigger: TGTCTCCTTCCGAGGACTGCGATGCTCATACACGCACATCATTAAGAGCTCTGCGTTTGGGAACAGGCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000464039.5 ENST00000475058.5 ENST00000492366.5 |
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| CDS CAA 72 bp | GAGCATCGCAGTCCTCGGAAGGAGACAGACCCACCTTaGACGCTGGAAGCCACAGAAGACATGTTGATAATA | + |
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Preference number: 6 (lower is better) Translates to: EHRSPRKETDPP*TLEATEDMLII Trigger: TATTATCAACATGTCTTCTGTGGCTTCCAGCGTCAAAGGTGGGTCTGTCTCCTTCCGAGGACTGCGATGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000464039.5 ENST00000475058.5 ENST00000492366.5 |
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| CDS CCA 72 bp | TCCCACCTGCAGTTCATTCACCAGATCTATGCTACTTaGCCACTCCTAGCTGCAAAGAGGTTGGAAGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SHLQFIHQIYAT*PLLAAKRLEVE Trigger: CTCAACTTCCAACCTCTTTGCAGCTAGGAGTGGCCAAGTAGCATAGATCTGGTGAATGAACTGCAGGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504285.5 |
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| CDS TCA 72 bp | GATGATGTTTGCTGCCTTGCTCCTAGTTTTGGACTGTaGATTCTTTTATGGCCAGAGCACATACCGGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: DDVCCLAPSFGL*ILLWPEHIPVL Trigger: GAGCACCGGTATGTGCTCTGGCCATAAAAGAATTCACAGTCCAAAACTAGGAGCAAGGCAGCAAACATCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000464039.5 ENST00000475058.5 ENST00000492366.5 |
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| CDS CAA 90 bp | ATTCACCAGATCTATGCTACTTGGCCACTCCTAGCTGCAAAGAGGTaGGAAGTTGAGACTTTTGTTTCCAGTTTAAGCAGCGAGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: IHQIYATWPLLAAKR*EVETFVSSLSSELM Trigger: CATCAGCTCGCTGCTTAAACTGGAAACAAAAGTCTCAACTTCCAACCTCTTTGCAGCTAGGAGTGGCCAAGTAGCATAGATCTGGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504285.5 |
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| CDS TCA 72 bp | GTACTGCTGTCCTTGTCCTTCAACTTGACTTCTTGCTaGTGGCTCAGATCAACTGTCTTTGTGAAGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: VLLSLSFNLTSC*WLRSTVFVKHS Trigger: GGAATGCTTCACAAAGACAGTTGATCTGAGCCATCAGCAAGAAGTCAAGTTGAAGGACAAGGACAGCAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000464039.5 ENST00000475058.5 ENST00000492366.5 |
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| CDS TCA 72 bp | TACTTGGCCACTCCTAGCTGCAAAGAGGTTGGAAGTTaGGACTTTTGTTTCCAGTTTAAGCAGCGAGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: YLATPSCKEVGS*DFCFQFKQRAD Trigger: ATCAGCTCGCTGCTTAAACTGGAAACAAAAGTCTCAACTTCCAACCTCTTTGCAGCTAGGAGTGGCCAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504285.5 |
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| CDS GCA 72 bp | GTAAAGCCTCCAGTCAAAGGTTTTGCTAGGAATCTTTaGCAACCGAAGAAGCACTTCCAGAACAAATGCCGA | + |
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Preference number: 6 (lower is better) Translates to: VKPPVKGFARNL*QPKKHFQNKCR Trigger: TCGGCATTTGTTCTGGAAGTGCTTCTTCGGTTGGCAAAGATTCCTAGCAAAACCTTTGACTGGAGGCTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464039.5 |
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| CDS CCA 72 bp | AATCTTGCTGAAGTTCTCTTAGACTGCACAGCTGTCTaGGATGCTTCCACTCAACCTGGTTTCCTTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: NLAEVLLDCTAV*DASTQPGFLLF Trigger: GAAAAGAAGGAAACCAGGTTGAGTGGAAGCATCCCAGACAGCTGTGCAGTCTAAGAGAACTTCAGCAAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464039.5 ENST00000509245.1 |
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| CDS CAA 72 bp | ATCTATGCTACTTGGCCACTCCTAGCTGCAAAGAGGTaGGAAGTTGAGACTTTTGTTTCCAGTTTAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: IYATWPLLAAKR*EVETFVSSLSS Trigger: GCTGCTTAAACTGGAAACAAAAGTCTCAACTTCCAACCTCTTTGCAGCTAGGAGTGGCCAAGTAGCATAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504285.5 |
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| CDS GCA 72 bp | CTATTTAAGAAGGAAACCTTCTCAGAAATTCCCACCTaGAGTTCATTCACCAGATCTATGCTACTTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LFKKETFSEIPT*SSFTRSMLLGH Trigger: GTGGCCAAGTAGCATAGATCTGGTGAATGAACTGCAGGTGGGAATTTCTGAGAAGGTTTCCTTCTTAAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504285.5 |
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| CDS CAA 72 bp | TTTTGTACTGCTGTCCTTGTCCTTCAACTTGACTTCTaGCTGATGGCTCAGATCAACTGTCTTTGTGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: FCTAVLVLQLDF*LMAQINCLCEA Trigger: TGCTTCACAAAGACAGTTGATCTGAGCCATCAGCAAGAAGTCAAGTTGAAGGACAAGGACAGCAGTACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000464039.5 ENST00000475058.5 ENST00000492366.5 |
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| CDS CAA 90 bp | TCCACAAACTCACAGGCAGTTATTTCCCTGTATTTTGACAGCGCTTaGTACAAACCTCTGTTATATATCATCACACTGGAGAAGATGATG | + |
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Preference number: 6 (lower is better) Translates to: STNSQAVISLYFDSA*YKPLLYIITLEKMM Trigger: CATCATCTTCTCCAGTGTGATGATATATAACAGAGGTTTGTACAAAGCGCTGTCAAAATACAGGGAAATAACTGCCTGTGAGTTTGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000464039.5 ENST00000475058.5 ENST00000492366.5 |
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| CDS CAA 72 bp | TATATCATCACACTGGAGAAGATGATGTTTGCTGCCTaGCTCCTAGTTTTGGACTGTGAATTCTTTTATGGC | + |
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Preference number: 6 (lower is better) Translates to: YIITLEKMMFAA*LLVLDCEFFYG Trigger: GCCATAAAAGAATTCACAGTCCAAAACTAGGAGCAAGGCAGCAAACATCATCTTCTCCAGTGTGATGATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000464039.5 ENST00000475058.5 ENST00000492366.5 |
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