RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BDH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000161267, ENSG00000275544

Ensembl transcript IDs: ENST00000358186.6, ENST00000392378.6, ENST00000392379.6, ENST00000431056.5, ENST00000432819.5, ENST00000441275.5, ENST00000445160.2, ENST00000446746.5, ENST00000455876.1, ENST00000468710.1, ENST00000476764.2, ENST00000477015.5, ENST00000479425.5, ENST00000483920.1, ENST00000492681.1, ENST00000495285.1, ENST00000612690.3, ENST00000617317.2, ENST00000625648.2, ENST00000625957.2, ENST00000626126.1, ENST00000626468.2, ENST00000626785.1, ENST00000626799.2, ENST00000626925.1, ENST00000627756.2, ENST00000627844.1, ENST00000629914.1, ENST00000630698.2, ENST00000631323.2, ENST00000651856.1

Found 1399 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACTGCCTGAACCCCGTAGCCCACTCCGGCTGCCCGGGCTCTTCTaGCTTCTCCTGGCACCAGCCTCCGGGCCCGGGCCAGCTGCTAGG +
Preference number: 1 (lower is better)
Translates to: ALPEPRSPLRLPGLF*LLLAPASGPGPAAR
Trigger: CCTAGCAGCTGGCCCGGGCCCGGAGGCTGGTGCCAGGAGAAGGCAGAAGAGCCCGGGCAGCCGGAGTGGGCTACGGGGTTCAGGCAGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR TCA 90 bp CCTCTAGCGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTaGTTCGAAGGCGGGCACTGGGGACCCTGCCCCGGGCCGAAAGCC +
Preference number: 1 (lower is better)
Translates to: PLAAGPPRERRKRGV*FEGGHWGPCPGPKA
Trigger: GGCTTTCGGCCCGGGGCAGGGTCCCCAGTGCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCGCTAGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CCA 90 bp ATGGCCCCGCAGAGCACTCACCGGCTGAGAGTGGCCGGAGGGTGGTaGCCGGTACAGCAGTGTACCCAGTGCAGTCCACCACGCCCGCAC +
Preference number: 1 (lower is better)
Translates to: MAPQSTHRLRVAGGW*PVQQCTQCSPPRPH
Trigger: GTGCGGGCGTGGTGGACTGCACTGGGTACACTGCTGTACCGGCCACCACCCTCCGGCCACTCTCAGCCGGTGAGTGCTCTGCGGGGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp CAGATGGCCCCGCAGAGCACTCACCGGCTGAGAGTGGCCGGAGGGTaGTGGCCGGTACAGCAGTGTACCCAGTGCAGTCCACCACGCCCG +
Preference number: 1 (lower is better)
Translates to: QMAPQSTHRLRVAGG*WPVQQCTQCSPPRP
Trigger: CGGGCGTGGTGGACTGCACTGGGTACACTGCTGTACCGGCCACCACCCTCCGGCCACTCTCAGCCGGTGAGTGCTCTGCGGGGCCATCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp CAGGCTGCTCCGCGAAACTGCGGACTAGGAGGAAGCTGGCTGTCCTaGTTGCCTGCCTGCCTGCCTGCCTGCCTGCCGCTCCTTCGCCAC +
Preference number: 1 (lower is better)
Translates to: QAAPRNCGLGGSWLS*LPACLPACLPLLRH
Trigger: GTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCAGTTTCGCGGAGCAGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp GGGACCCTGCCCCGGGCCGAAAGCCCCCTGGAGGACAGTGGTGTTTaGCTTCGGTCCCAACATACAGGCCCTGGGCAGTCGCAGGGATGG +
Preference number: 1 (lower is better)
Translates to: GTLPRAESPLEDSGV*LRSQHTGPGQSQGW
Trigger: CCATCCCTGCGACTGCCCAGGGCCTGTATGTTGGGACCGAAGCCAAACACCACTGTCCTCCAGGGGGCTTTCGGCCCGGGGCAGGGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 90 bp CTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTGCCTaGCTGCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCG +
Preference number: 1 (lower is better)
Translates to: LGGSWLSCLPACLPA*LPLLRHVQGEVLTA
Trigger: CGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp CGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTaGCTGCCTGCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGAC +
Preference number: 1 (lower is better)
Translates to: RTRRKLAVLLACLPA*LPAAPSPRARRGSD
Trigger: GTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp TCCGCGAAACTGCGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTaGCTGCCTGCCTGCCTGCCTGCCGCTCCTTCGCCACGTGCAAGG +
Preference number: 1 (lower is better)
Translates to: SAKLRTRRKLAVLLA*LPACLPAAPSPRAR
Trigger: CCTTGCACGTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCAGTTTCGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp TGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGACTaGCCCGCAGGCCACACCACCTCCCTGGACCCAGGGTTTCTGTGC +
Preference number: 1 (lower is better)
Translates to: WWPVPLRVYLSSGQD*PAGHTTSLDPGFLC
Trigger: GCACAGAAACCCTGGGTCCAGGGAGGTGGTGTGGCCTGCGGGGCAGTCTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp AGCTGTGGTGGCTGGGTAGCAGGACCTGCACTTGGCCCCTGTGCCTaGTTGCTGTCTGGCCAACCCAACCTGGGGCTGCCTGAGCCAGGG +
Preference number: 1 (lower is better)
Translates to: SCGGWVAGPALGPCA*LLSGQPNLGLPEPG
Trigger: CCCTGGCTCAGGCAGCCCCAGGTTGGGTTGGCCAGACAGCAACCAGGCACAGGGGCCAAGTGCAGGTCCTGCTACCCAGCCACCACAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp CTCCCTTTCCAGGCTGCTCCGCGAAACTGCGGACTAGGAGGAAGCTaGCTGTCCTGCTTGCCTGCCTGCCTGCCTGCCTGCCTGCCGCTC +
Preference number: 1 (lower is better)
Translates to: LPFQAAPRNCGLGGS*LSCLPACLPACLPL
Trigger: GAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCAGTTTCGCGGAGCAGCCTGGAAAGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp CAGACCCCCTGCCATGGGTGGCAAGGGTGCAGACCTAGCAGCTTGTaGCAGGCGGGGCCAGGCTGGCTGTCACCTGCTCACACAGCCTCT +
Preference number: 1 (lower is better)
Translates to: QTPCHGWQGCRPSSL*QAGPGWLSPAHTAS
Trigger: AGAGGCTGTGTGAGCAGGTGACAGCCAGCCTGGCCCCGCCTGTCACAAGCTGCTAGGTCTGCACCCTTGCCACCCATGGCAGGGGGTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp GTCACAGAACACGTGGCCAGATGGCCCCGCAGAGCACTCACCGGCTaGGAGTGGCCGGAGGGTGGTGGCCGGTACAGCAGTGTACCCAGT +
Preference number: 1 (lower is better)
Translates to: VTEHVARWPRRALTG*EWPEGGGRYSSVPS
Trigger: ACTGGGTACACTGCTGTACCGGCCACCACCCTCCGGCCACTCTCAGCCGGTGAGTGCTCTGCGGGGCCATCTGGCCACGTGTTCTGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp CTGAGAGTGGCCGGAGGGTGGTGGCCGGTACAGCAGTGTACCCAGTaGAGTCCACCACGCCCGCACTTGTCTGGCAGCAGAGTTGAGCGG +
Preference number: 1 (lower is better)
Translates to: LRVAGGWWPVQQCTQ*SPPRPHLSGSRVER
Trigger: CCGCTCAACTCTGCTGCCAGACAAGTGCGGGCGTGGTGGACTGCACTGGGTACACTGCTGTACCGGCCACCACCCTCCGGCCACTCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp CTGCACTTGGCCCCTGTGCCTGGTTGCTGTCTGGCCAACCCAACCTaGGGCTGCCTGAGCCAGGGGAGCCTCTGCTTGCTCATGTCGGCT +
Preference number: 1 (lower is better)
Translates to: LHLAPVPGCCLANPT*GCLSQGSLCLLMSA
Trigger: AGCCGACATGAGCAAGCAGAGGCTCCCCTGGCTCAGGCAGCCCCAGGTTGGGTTGGCCAGACAGCAACCAGGCACAGGGGCCAAGTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp TCTCATAGCGCAGGCAGTCCGAGAAAGCCTCTACCCCGAACTTGGTaGTGCAGTACGGGGAGCGGGCCGGGTTGGCCATGCGGCCCAGCA +
Preference number: 1 (lower is better)
Translates to: SHSAGSPRKPLPRTW*CSTGSGPGWPCGPA
Trigger: TGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCCGTACTGCATCACCAAGTTCGGGGTAGAGGCTTTCTCGGACTGCCTGCGCTATGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 90 bp AGATGCCACAGTGCCCTGCCATGGCACCACTGCTCGTGCCAAGCCTaGCCCATCGACACCGGCCCCACCCAAGGCAAAACCAAGCAGACC +
Preference number: 1 (lower is better)
Translates to: RCHSALPWHHCSCQA*PIDTGPTQGKTKQT
Trigger: GGTCTGCTTGGTTTTGCCTTGGGTGGGGCCGGTGTCGATGGGGCAGGCTTGGCACGAGCAGTGGTGCCATGGCAGGGCACTGTGGCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 90 bp AGCCCTGGTCCCTTGCTCAACAGCTGCCCACCCCGTGCCTCCGAATaGGCCACTCGCAAGTCACCCTTCCTTAGTGCCCGCACACACCAG +
Preference number: 1 (lower is better)
Translates to: SPGPLLNSCPPRASE*ATRKSPFLSARTHQ
Trigger: CTGGTGTGTGCGGGCACTAAGGAAGGGTGACTTGCGAGTGGCGCATTCGGAGGCACGGGGTGGGCAGCTGTTGAGCAAGGGACCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp AGACAGGGAAGCCTGGGCCTCCCTTTCCAGGCTGCTCCGCGAAACTaGGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTG +
Preference number: 1 (lower is better)
Translates to: RQGSLGLPFQAAPRN*GLGGSWLSCLPACL
Trigger: CAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCAGTTTCGCGGAGCAGCCTGGAAAGGGAGGCCCAGGCTTCCCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp GGCACTGTGGCGTGGCCCGCTAAGTCTCTGCAGAGGCACCAGGGATaGCTTCGGACACAGCAGCCAGGCCGGAGGCTCGATGGTCTAAAG +
Preference number: 1 (lower is better)
Translates to: GTVAWPAKSLQRHQG*LRTQQPGRRLDGLK
Trigger: CTTTAGACCATCGAGCCTCCGGCCTGGCTGCTGTGTCCGAAGGCATCCCTGGTGCCTCTGCAGAGACTTAGCGGGCCACGCCACAGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 90 bp AGACAGCGGGGACAACGGCCCGGGAGGCAGCTGAATTGCCCATTGTaGGGCCCTTCTTCCTTGGCACTGCCTGAACCCCGTAGCCCACTC +
Preference number: 1 (lower is better)
Translates to: RQRGQRPGRQLNCPL*GPSSLALPEPRSPL
Trigger: GAGTGGGCTACGGGGTTCAGGCAGTGCCAAGGAAGAAGGGCCTCACAATGGGCAATTCAGCTGCCTCCCGGGCCGTTGTCCCCGCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 90 bp CACACGTGCGACGAGACAGGGAAGCCTGGGCCTCCCTTTCCAGGCTaGTCCGCGAAACTGCGGACTAGGAGGAAGCTGGCTGTCCTGCTT +
Preference number: 1 (lower is better)
Translates to: HTCDETGKPGPPFPG*SAKLRTRRKLAVLL
Trigger: AAGCAGGACAGCCAGCTTCCTCCTAGTCCGCAGTTTCGCGGAGCAGCCTGGAAAGGGAGGCCCAGGCTTCCCTGTCTCGTCGCACGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp CAGTGGCCCTTTGAAAAGGCACTGTGGCGTGGCCCGCTAAGTCTCTaGAGAGGCACCAGGGATGCCTTCGGACACAGCAGCCAGGCCGGA +
Preference number: 1 (lower is better)
Translates to: QWPFEKALWRGPLSL*RGTRDAFGHSSQAG
Trigger: TCCGGCCTGGCTGCTGTGTCCGAAGGCATCCCTGGTGCCTCTGCAGAGACTTAGCGGGCCACGCCACAGTGCCTTTTCAAAGGGCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp GTCCGGCACAGGGCTGCCCCTCAGAATGTGACACTAATATGGCACTaGGACCATCGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGA +
Preference number: 1 (lower is better)
Translates to: VRHRAAPQNVTLIWH*DHRQLLRPSHHSPG
Trigger: TCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCGATGGTCCCAGTGCCATATTAGTGTCACATTCTGAGGGGCAGCCCTGTGCCGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp GCTGCCGTCCGGCACAGGGCTGCCCCTCAGAATGTGACACTAATATaGCACTGGGACCATCGGCAGCTCCTCCGCCCTTCCCATCACAGC +
Preference number: 1 (lower is better)
Translates to: AAVRHRAAPQNVTLI*HWDHRQLLRPSHHS
Trigger: GCTGTGATGGGAAGGGCGGAGGAGCTGCCGATGGTCCCAGTGCCATATTAGTGTCACATTCTGAGGGGCAGCCCTGTGCCGGACGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp GCGGCTCTCTGCCAGCAGACAAGCAGTGAGGGTCTAGGTGCCTGGTaGCCCCAACTGGCTTTGCTTCCAGGGCTGTTGCGAGCCACAGTG +
Preference number: 1 (lower is better)
Translates to: AALCQQTSSEGLGAW*PQLALLPGLLRATV
Trigger: CACTGTGGCTCGCAACAGCCCTGGAAGCAAAGCCAGTTGGGGTCACCAGGCACCTAGACCCTCACTGCTTGTCTGCTGGCAGAGAGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp TCCCACCCCCTCCATACAGCCAGCTCTGAGTCACTGGCTGCTGGCTaGCCAGTCACACAGCACCATGGACATGCAGAGGTACCAGTGGGC +
Preference number: 1 (lower is better)
Translates to: SHPLHTASSESLAAG*PVTQHHGHAEVPVG
Trigger: GCCCACTGGTACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTCAGAGCTGGCTGTATGGAGGGGGTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CCA 90 bp GCCCTTGCCCAGCCTCCAACCATCAGGGGATGGGTTTGTGCTGGCTaGAGTCACCAGACCATAGGTCCGCACAGGCAAAGGCCTCCTTCC +
Preference number: 1 (lower is better)
Translates to: ALAQPPTIRGWVCAG*SHQTIGPHRQRPPS
Trigger: GGAAGGAGGCCTTTGCCTGTGCGGACCTATGGTCTGGTGACTCCAGCCAGCACAAACCCATCCCCTGATGGTTGGAGGCTGGGCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp GGACCCCTGTTTGAAGACAGCGGGGACAACGGCCCGGGAGGCAGCTaGATTGCCCATTGTGAGGCCCTTCTTCCTTGGCACTGCCTGAAC +
Preference number: 1 (lower is better)
Translates to: GPLFEDSGDNGPGGS*IAHCEALLPWHCLN
Trigger: GTTCAGGCAGTGCCAAGGAAGAAGGGCCTCACAATGGGCAATTCAGCTGCCTCCCGGGCCGTTGTCCCCGCTGTCTTCAAACAGGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 90 bp GCAAGAAGCCCTTGCCCAGCCTCCAACCATCAGGGGATGGGTTTGTaGTGGCTGGAGTCACCAGACCATAGGTCCGCACAGGCAAAGGCC +
Preference number: 1 (lower is better)
Translates to: ARSPCPASNHQGMGL*WLESPDHRSAQAKA
Trigger: GGCCTTTGCCTGTGCGGACCTATGGTCTGGTGACTCCAGCCAGCACAAACCCATCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp TCCCCTAGGTGCGCCGACCTTCCCAAACAAGACGCAGGCATGAGATaGACGGGACAGATGGGCCTGGAGCTCAGGCTGTCATTCCCACAG +
Preference number: 1 (lower is better)
Translates to: SPRCADLPKQDAGMR*TGQMGLELRLSFPQ
Trigger: CTGTGGGAATGACAGCCTGAGCTCCAGGCCCATCTGTCCCGTGCATCTCATGCCTGCGTCTTGTTTGGGAAGGTCGGCGCACCTAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp AGAAGCCCTTGCCCAGCCTCCAACCATCAGGGGATGGGTTTGTGCTaGCTGGAGTCACCAGACCATAGGTCCGCACAGGCAAAGGCCTCC +
Preference number: 1 (lower is better)
Translates to: RSPCPASNHQGMGLC*LESPDHRSAQAKAS
Trigger: GGAGGCCTTTGCCTGTGCGGACCTATGGTCTGGTGACTCCAGCCAGCACAAACCCATCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp TCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCATTaGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGGGAAGAGTCT +
Preference number: 1 (lower is better)
Translates to: SALPITAPEVPLYLH*NESPSVPPACREES
Trigger: AGACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp TGGTCCCCATTCACTCTCCCTGTCTCTACACATCTCCACAGATGCTaGGGCCGCCAGGGTAGGCCTCAGCCACAGCTCTCTCCACCCTCA +
Preference number: 1 (lower is better)
Translates to: WSPFTLPVSTHLHRC*GRQGRPQPQLSPPS
Trigger: TGAGGGTGGAGAGAGCTGTGGCTGAGGCCTACCCTGGCGGCCTCAGCATCTGTGGAGATGTGTAGAGACAGGGAGAGTGAATGGGGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp CACCGCCTGGTTTTCCATGGAAAGGAAGCCTCCCCAGTGGCCCTTTaGAAAGGCACTGTGGCGTGGCCCGCTAAGTCTCTGCAGAGGCAC +
Preference number: 1 (lower is better)
Translates to: HRLVFHGKEASPVAL*KGTVAWPAKSLQRH
Trigger: GTGCCTCTGCAGAGACTTAGCGGGCCACGCCACAGTGCCTTTTCAAAGGGCCACTGGGGAGGCTTCCTTTCCATGGAAAACCAGGCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 90 bp GGTGCCCCGAGTCTCCATAAGGCACAGGCTTCTCTCCCCGCACCATaGTCCCTGTTTCTTACGGCAGGTCCCACACCACTTTGTCCACCT +
Preference number: 1 (lower is better)
Translates to: GAPSLHKAQASLPAP*SLFLTAGPTPLCPP
Trigger: AGGTGGACAAAGTGGTGTGGGACCTGCCGTAAGAAACAGGGAGCATGGTGCGGGGAGAGAAGCCTGTGCCTTATGGAGACTCGGGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp CCATTGTACCTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTaGAGGGAAGAGTCTGATGCCCCTCGTGACATCACCGAGCTCTCC +
Preference number: 1 (lower is better)
Translates to: PLYLHWNESPSVPPA*REESDAPRDITELS
Trigger: GGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTACAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp AAGCAGCTCTCTCCACTGTCCACACAGGGCCAGGCAACTGTTTCCTaGCCAGGTAGAAGGATAGCCCTCTCCCGACCAGCTCTCCGTGCT +
Preference number: 1 (lower is better)
Translates to: KQLSPLSTQGQATVS*PGRRIALSRPALRA
Trigger: AGCACGGAGAGCTGGTCGGGAGAGGGCTATCCTTCTACCTGGGCAGGAAACAGTTGCCTGGCCCTGTGTGGACAGTGGAGAGAGCTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp TGCCTGGGTTGCTGTGAGAATCAGGTGAGAGGAAGCTGTGGTGGCTaGGTAGCAGGACCTGCACTTGGCCCCTGTGCCTGGTTGCTGTCT +
Preference number: 1 (lower is better)
Translates to: CLGCCENQVRGSCGG*VAGPALGPCAWLLS
Trigger: AGACAGCAACCAGGCACAGGGGCCAAGTGCAGGTCCTGCTACCCAGCCACCACAGCTTCCTCTCACCTGATTCTCACAGCAACCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp CTCGGGAATGGCCTTGACAGAGCCGACTTCCCGCTGGAAGGATACTaGGGGCTCCTCCAGCACATTCTCTCACAGGGGGCAGCACTTAGA +
Preference number: 1 (lower is better)
Translates to: LGNGLDRADFPLEGY*GLLQHILSQGAALR
Trigger: TCTAAGTGCTGCCCCCTGTGAGAGAATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAGGCCATTCCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp TCCATGGAAAGGAAGCCTCCCCAGTGGCCCTTTGAAAAGGCACTGTaGCGTGGCCCGCTAAGTCTCTGCAGAGGCACCAGGGATGCCTTC +
Preference number: 1 (lower is better)
Translates to: SMERKPPQWPFEKAL*RGPLSLCRGTRDAF
Trigger: GAAGGCATCCCTGGTGCCTCTGCAGAGACTTAGCGGGCCACGCCACAGTGCCTTTTCAAAGGGCCACTGGGGAGGCTTCCTTTCCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp CGTAGTCCTTGCGCACGACCTCAGGCAGCTCCTCCCACATCTTCTTaGCGATGGCCTGAATGCTCTCAGGGCTGTAAAGGCTGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: RSPCARPQAAPPTSS*RWPECSQGCKGWWQ
Trigger: CTGCCACCAGCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGGAGCTGCCTGAGGTCGTGCGCAAGGACTACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 90 bp GACACAGCAGCCAGGCCGGAGGCTCGATGGTCTAAAGTTTGGCTCTaGAATCCCCTAGGTGCGCCGACCTTCCCAAACAAGACGCAGGCA +
Preference number: 1 (lower is better)
Translates to: DTAARPEARWSKVWL*NPLGAPTFPNKTQA
Trigger: TGCCTGCGTCTTGTTTGGGAAGGTCGGCGCACCTAGGGGATTTCAGAGCCAAACTTTAGACCATCGAGCCTCCGGCCTGGCTGCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 90 bp AAAAGAGGCCGAGGCGAGGCGGGAATGAAGGCCACGCTGAAGCCCTaGAGAACAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: KRGRGEAGMKATLKP*RTGVCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATTCCCGCCTCGCCTCGGCCTCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 90 bp CAGCTCTTCCTTCTTGGGGTGCTTCTGTGGAGTCTACAAAGATTCTaGCACGGAGACCTCCGACTGCCACTCCAGACGCAGGGCAGCGTG +
Preference number: 1 (lower is better)
Translates to: QLFLLGVLLWSLQRF*HGDLRLPLQTQGSV
Trigger: CACGCTGCCCTGCGTCTGGAGTGGCAGTCGGAGGTCTCCGTGGCAGAATCTTTGTAGACTCCACAGAAGCACCCCAAGAAGGAAGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp GCCCCCAGTTATTCAGAGAAATCTTTCCAACCACCCTCAGCCTGCTaGCTGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTC +
Preference number: 1 (lower is better)
Translates to: APSYSEKSFQPPSAC*LQTLVACPPQGLPV
Trigger: GACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCAGCCAGCAGGCTGAGGGTGGTTGGAAAGATTTCTCTGAATAACTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 90 bp CTTACTCTGACAAGAAGGAGCGGCTCTCTGCCAGCAGACAAGCAGTaGGGGTCTAGGTGCCTGGTGACCCCAACTGGCTTTGCTTCCAGG +
Preference number: 1 (lower is better)
Translates to: LTLTRRSGSLPADKQ*GSRCLVTPTGFASR
Trigger: CCTGGAAGCAAAGCCAGTTGGGGTCACCAGGCACCTAGACCCTCACTGCTTGTCTGCTGGCAGAGAGCCGCTCCTTCTTGTCAGAGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp TCTGGCTCGAGTGGCAGGACCCCATGGTTGCTACTGTGCGTAGGCTaGGAGTCTCCTCGCTGTTACGTAACTGAGGACTTCTTCCCTCCC +
Preference number: 1 (lower is better)
Translates to: SGSSGRTPWLLLCVG*ESPRCYVTEDFFPP
Trigger: GGGAGGGAAGAAGTCCTCAGTTACGTAACAGCGAGGAGACTCTCAGCCTACGCACAGTAGCAACCATGGGGTCCTGCCACTCGAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp CTCACACAGCCTCTTGGCCCCGGGTGGAATGCTAAGCACAGCAGGTaGTCTGTAACAAGGCACTGTCAGGCGCATCTTGCAAGAAGCCCT +
Preference number: 1 (lower is better)
Translates to: LTQPLGPGWNAKHSR*SVTRHCQAHLARSP
Trigger: AGGGCTTCTTGCAAGATGCGCCTGACAGTGCCTTGTTACAGAGCACCTGCTGTGCTTAGCATTCCACCCGGGGCCAAGAGGCTGTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp TGTCTGGCCAACCCAACCTGGGGCTGCCTGAGCCAGGGGAGCCTCTaGTTGCTCATGTCGGCTCCTATATCAACACAGTTTGCACAGGTT +
Preference number: 1 (lower is better)
Translates to: CLANPTWGCLSQGSL*LLMSAPISTQFAQV
Trigger: AACCTGTGCAAACTGTGTTGATATAGGAGCCGACATGAGCAAGCAGAGGCTCCCCTGGCTCAGGCAGCCCCAGGTTGGGTTGGCCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp CTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACCAGTaGGCACTTGGTGTGTGCTGCCCAGATGAGGACACAGAGTTAGTC +
Preference number: 1 (lower is better)
Translates to: LAGQSHSTMDMQRYQ*ALGVCCPDEDTELV
Trigger: GACTAACTCTGTGTCCTCATCTGGGCAGCACACACCAAGTGCCCACTGGTACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CCA 90 bp CTTCCAGGCCCCAGGAACCACGGGCACTTCCTCCTGAAACTGGGGTaGCTACAGCTGAAGCTGAGAAGAGCAACCAGCCTGCTGCTATTT +
Preference number: 1 (lower is better)
Translates to: LPGPRNHGHFLLKLG*LQLKLRRATSLLLF
Trigger: AAATAGCAGCAGGCTGGTTGCTCTTCTCAGCTTCAGCTGTAGCCACCCCAGTTTCAGGAGGAAGTGCCCGTGGTTCCTGGGGCCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp CCAGCTGCTAGGAGAGCGAGAACACTGTTTCTGAAGGGTGCTGCTTaGTTCTTTGTTCCCGGTTTCCGAAGCGCGAATCCCGAACGCCGT +
Preference number: 1 (lower is better)
Translates to: PAARRARTLFLKGAA*FFVPGFRSANPERR
Trigger: ACGGCGTTCGGGATTCGCGCTTCGGAAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAGAAACAGTGTTCTCGCTCTCCTAGCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 90 bp TTTGCCCCCAGTTATTCAGAGAAATCTTTCCAACCACCCTCAGCCTaGTGGCTGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCT +
Preference number: 1 (lower is better)
Translates to: FAPSYSEKSFQPPSA*WLQTLVACPPQGLP
Trigger: AGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCAGCCAGCAGGCTGAGGGTGGTTGGAAAGATTTCTCTGAATAACTGGGGGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp CCTGGAGGACAGTGGTGTTTGGCTTCGGTCCCAACATACAGGCCCTaGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAG +
Preference number: 1 (lower is better)
Translates to: PGGQWCLASVPTYRP*AVAGMAAFKLKPKK
Trigger: CTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGCCTGTATGTTGGGACCGAAGCCAAACACCACTGTCCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CCA 90 bp AGCCAGGCCCTGTTCGAAATACAGGCAGTGAACAGACCTCACAAATaGGGAGTCTTTGTCAGACCCCCTGCCATGGGTGGCAAGGGTGCA +
Preference number: 1 (lower is better)
Translates to: SQALFEIQAVNRPHK*GVFVRPPAMGGKGA
Trigger: TGCACCCTTGCCACCCATGGCAGGGGGTCTGACAAAGACTCCCCATTTGTGAGGTCTGTTCACTGCCTGTATTTCGAACAGGGCCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp ACACTTCAGAGAGGAGCGAGCCTGGGCACTGTGATGTTCACAGGATaGGCAGGAGGAGGAGCTAGCAAGCAAGATGGGGAAGAACCCTTC +
Preference number: 1 (lower is better)
Translates to: TLQRGASLGTVMFTG*AGGGASKQDGEEPF
Trigger: GAAGGGTTCTTCCCCATCTTGCTTGCTAGCTCCTCCTCCTGCCCATCCTGTGAACATCACAGTGCCCAGGCTCGCTCCTCTCTGAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 90 bp ACTCCCAAACTTGTATGCGAGGTAAAGCTTTCCCCTGCCCAGCCCTaGGGGCTGTGGGAAGTAGGTGCTGGTGGAGGTTGTCTTTCTCAC +
Preference number: 1 (lower is better)
Translates to: TPKLVCEVKLSPAQP*GLWEVGAGGGCLSH
Trigger: GTGAGAAAGACAACCTCCACCAGCACCTACTTCCCACAGCCCTCAGGGCTGGGCAGGGGAAAGCTTTACCTCGCATACAAGTTTGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 90 bp GCTGGACGGTTCTCAATCGGTCACTGTTTAGGCTGTCCAGCTCCTTaGCCCCATCATGGCCTTTGTCCTAACACCGCTTCCGTTCCTGGA +
Preference number: 1 (lower is better)
Translates to: AGRFSIGHCLGCPAP*PHHGLCPNTASVPG
Trigger: TCCAGGAACGGAAGCGGTGTTAGGACAAAGGCCATGATGGGGTCAAGGAGCTGGACAGCCTAAACAGTGACCGATTGAGAACCGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 90 bp AGCGGATGTAGATCATGTCGGAGATGGCTCCAGGCAAGTGGGTCATaGTCTGCATTCGCAGCCACCAGTAGTAGTCCATGGGGTGGTAGC +
Preference number: 1 (lower is better)
Translates to: SGCRSCRRWLQASGS*SAFAATSSSPWGGS
Trigger: GCTACCACCCCATGGACTACTACTGGTGGCTGCGAATGCAGATCATGACCCACTTGCCTGGAGCCATCTCCGACATGATCTACATCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 90 bp CACAGCACCATGGACATGCAGAGGTACCAGTGGGCACTTGGTGTGTaGTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGC +
Preference number: 1 (lower is better)
Translates to: HSTMDMQRYQWALGV*CPDEDTELVRRFSG
Trigger: GCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACACACCAAGTGCCCACTGGTACCTCTGCATGTCCATGGTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 90 bp CTAGAACAAGGTCCACGGTACAAAAGCATCCTATGGTTATGTAACTaGAGCGGCCACCAAGCGTCCCCCTCTGGGCTCTGGAGGGTTTCG +
Preference number: 1 (lower is better)
Translates to: LEQGPRYKSILWLCN*SGHQASPSGLWRVS
Trigger: CGAAACCCTCCAGAGCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTTTGTACCGTGGACCTTGTTCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 90 bp GCTATCATTCAGCTCTTCTCAGACCCCTATACAAGACCTCTCTGGTaGCCCTACACAGCATCACGACAAGGTCCCTGCAGTCCTCAGGGG +
Preference number: 1 (lower is better)
Translates to: AIIQLFSDPYTRPLW*PYTASRQGPCSPQG
Trigger: CCCCTGAGGACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGAGCTGAATGATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp CTGATTTTCCGCATCACCAGCTCTGGGCTGGAGGTTAGATCTGGCTaGACACCCAGCTCTACCCCTCACTTGGTGACAGACTTGGGAAAG +
Preference number: 1 (lower is better)
Translates to: LIFRITSSGLEVRSG*TPSSTPHLVTDLGK
Trigger: CTTTCCCAAGTCTGTCACCAAGTGAGGGGTAGAGCTGGGTGTCCAGCCAGATCTAACCTCCAGCCCAGAGCTGGTGATGCGGAAAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp CAACATACAGGCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTaGAACCCAAGAAGTGATCATGCAGACCCTGCCTCAAGTGGCATC +
Preference number: 1 (lower is better)
Translates to: QHTGPGQSQGWQLSN*NPRSDHADPASSGI
Trigger: GATGCCACTTGAGGCAGGGTCTGCATGATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGCCTGTATGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR TCA 90 bp TCACCAAAGGAGAAGCACATGGTGCTTCTGGGACCCAGCATCTCCTaGGGTTGGTCCCCATTCACTCTCCCTGTCTCTACACATCTCCAC +
Preference number: 1 (lower is better)
Translates to: SPKEKHMVLLGPSIS*GWSPFTLPVSTHLH
Trigger: GTGGAGATGTGTAGAGACAGGGAGAGTGAATGGGGACCAACCTCAGGAGATGCTGGGTCCCAGAAGCACCATGTGCTTCTCCTTTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp CTTCCAGGGCTGTTGCGAGCCACAGTGTTATGTGATAGTGAAGAGTaGCACTCAGGAGACTTTTGTTCTGGCCCTGGTCCTGCCGTGGAT +
Preference number: 1 (lower is better)
Translates to: LPGLLRATVLCDSEE*HSGDFCSGPGPAVD
Trigger: ATCCACGGCAGGACCAGGGCCAGAACAAAAGTCTCCTGAGTGGCACTCTTCACTATCACATAACACTGTGGCTCGCAACAGCCCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp GAAAGGATCCTGCTAGAACAAGGTCCACGGTACAAAAGCATCCTATaGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCTC +
Preference number: 1 (lower is better)
Translates to: ERILLEQGPRYKSIL*LCNCSGHQASPSGL
Trigger: GAGCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTTTGTACCGTGGACCTTGTTCTAGCAGGATCCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR TCA 90 bp GGACATGCAGAGGTACCAGTGGGCACTTGGTGTGTGCTGCCCAGATaGGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCA +
Preference number: 1 (lower is better)
Translates to: GHAEVPVGTWCVLPR*GHRVSQKILGQMDP
Trigger: TGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACACACCAAGTGCCCACTGGTACCTCTGCATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR TCA 90 bp GGACAATCTCCACCACTTTCTCCACCTCTTCGCTGCTGCAGACATTaGGCTGGACGGTTCTCAATCGGTCACTGTTTAGGCTGTCCAGCT +
Preference number: 1 (lower is better)
Translates to: GQSPPLSPPLRCCRH*AGRFSIGHCLGCPA
Trigger: AGCTGGACAGCCTAAACAGTGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGAAGAGGTGGAGAAAGTGGTGGAGATTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 90 bp CGGAGAGATAGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTaGCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCAC +
Preference number: 1 (lower is better)
Translates to: RRDRFTMFALRFRGL*LPLHTLFVKAQVTH
Trigger: GTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCTATCTCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
3UTR GCA 90 bp AGCACCATGGACATGCAGAGGTACCAGTGGGCACTTGGTGTGTGCTaGCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAA +
Preference number: 1 (lower is better)
Translates to: STMDMQRYQWALGVC*PDEDTELVRRFSGK
Trigger: TTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACACACCAAGTGCCCACTGGTACCTCTGCATGTCCATGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 90 bp CTCTCTTCCACAGGCGGCACACAGGTACCAGGAAAACACGTGTCTTaGTTTAATGCAGTCTTCCACCTGGTGGCCCTTCAAATGCCCCTT +
Preference number: 1 (lower is better)
Translates to: LSSTGGTQVPGKHVS*FNAVFHLVALQMPL
Trigger: AAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTTTCCTGGTACCTGTGTGCCGCCTGTGGAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp GTTGCTATCATTCAGCTCTTCTCAGACCCCTATACAAGACCTCTCTaGTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCCTCAG +
Preference number: 1 (lower is better)
Translates to: VAIIQLFSDPYTRPL*CPYTASRQGPCSPQ
Trigger: CTGAGGACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGAGCTGAATGATAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp ATCTCCACCACTTTCTCCACCTCTTCGCTGCTGCAGACATTGAGCTaGACGGTTCTCAATCGGTCACTGTTTAGGCTGTCCAGCTCCTTG +
Preference number: 1 (lower is better)
Translates to: ISTTFSTSSLLQTLS*TVLNRSLFRLSSSL
Trigger: CAAGGAGCTGGACAGCCTAAACAGTGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGAAGAGGTGGAGAAAGTGGTGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 90 bp GATCTTGCGGGGTCTGGATCTTGGCTCTCTCGTTTCCTGGCTCTGTaGTTTTGGGCAAATGACTTCACCTCCCTGAGGCTCAGTTTCCTT +
Preference number: 1 (lower is better)
Translates to: DLAGSGSWLSRFLAL*FWANDFTSLRLSFL
Trigger: AAGGAAACTGAGCCTCAGGGAGGTGAAGTCATTTGCCCAAAATCACAGAGCCAGGAAACGAGAGAGCCAAGATCCAGACCCCGCAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp CCTGGTGGCCCTTCAAATGCCCCTTGGCGTGGAGCTCACATGATCTaGACCTCAGAAAGGTGGATTCTAGCTGACATGCACAAGAGGTAT +
Preference number: 1 (lower is better)
Translates to: PGGPSNAPWRGAHMI*TSERWILADMHKRY
Trigger: ATACCTCTTGTGCATGTCAGCTAGAATCCACCTTTCTGAGGTTCAGATCATGTGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 90 bp TTTCTGCAAAATAAGATAACCCCACCCTGCCTATCCTGCCTGGGTTaGTGTGAGAATCAGGTGAGAGGAAGCTGTGGTGGCTGGGTAGCA +
Preference number: 1 (lower is better)
Translates to: FLQNKITPPCLSCLG*CENQVRGSCGGWVA
Trigger: TGCTACCCAGCCACCACAGCTTCCTCTCACCTGATTCTCACAGCAACCCAGGCAGGATAGGCAGGGTGGGGTTATCTTATTTTGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp GAAAGCCTGTTTCTGCAAAATAAGATAACCCCACCCTGCCTATCCTaGCTGGGTTGCTGTGAGAATCAGGTGAGAGGAAGCTGTGGTGGC +
Preference number: 1 (lower is better)
Translates to: ESLFLQNKITPPCLS*LGCCENQVRGSCGG
Trigger: GCCACCACAGCTTCCTCTCACCTGATTCTCACAGCAACCCAGGCAGGATAGGCAGGGTGGGGTTATCTTATTTTGCAGAAACAGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp ACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTGGCCCTTCAAATaGCCCTTGGCGTGGAGCTCACATGATCTGAACCTCAGAAAGGTG +
Preference number: 1 (lower is better)
Translates to: TCLALMQSSTWWPFK*PLAWSSHDLNLRKV
Trigger: CACCTTTCTGAGGTTCAGATCATGTGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 90 bp TGCAGTAGGTCTCCATCTTGGCGATCTTTTCATCAAAGTACTTCTTaGCGTAGTCCTTGCGCACGACCTCAGGCAGCTCCTCCCACATCT +
Preference number: 1 (lower is better)
Translates to: CSRSPSWRSFHQSTS*RSPCARPQAAPPTS
Trigger: AGATGTGGGAGGAGCTGCCTGAGGTCGTGCGCAAGGACTACGGCAAGAAGTACTTTGATGAAAAGATCGCCAAGATGGAGACCTACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp AGTGTCAGCATCTCACCAAAGCTAGTAAACCTGTCTCAGAGCGCTTaGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCTGGTGTGTG +
Preference number: 1 (lower is better)
Translates to: SVSISPKLVNLSQSA*RLEGNSKDHSAWCV
Trigger: CACACACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTTTACTAGCTTTGGTGAGATGCTGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp AGGTACCAGGAAAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTaGTGGCCCTTCAAATGCCCCTTGGCGTGGAGCTCACATGATCTG +
Preference number: 1 (lower is better)
Translates to: RYQENTCLALMQSST*WPFKCPLAWSSHDL
Trigger: CAGATCATGTGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTTTCCTGGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 90 bp CCTGGGCTTTTCAATCACTGGAAACGATTAAAAGCCAGAACAACCTaGACAGGCCGGCCCAGCAGTTCTAGCTTACTCAGAAGATCCCAG +
Preference number: 1 (lower is better)
Translates to: PGLFNHWKRLKARTT*TGRPSSSSLLRRSQ
Trigger: CTGGGATCTTCTGAGTAAGCTAGAACTGCTGGGCCGGCCTGTGCAGGTTGTTCTGGCTTTTAATCGTTTCCAGTGATTGAAAAGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp CAGACTTGGGAAAGCCTGTTTCTGCAAAATAAGATAACCCCACCCTaGCTATCCTGCCTGGGTTGCTGTGAGAATCAGGTGAGAGGAAGC +
Preference number: 1 (lower is better)
Translates to: QTWESLFLQNKITPP*LSCLGCCENQVRGS
Trigger: GCTTCCTCTCACCTGATTCTCACAGCAACCCAGGCAGGATAGGCAGGGTGGGGTTATCTTATTTTGCAGAAACAGGCTTTCCCAAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp CAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCTaGTGTGTGTCATCAAGAATGAGGGATTGGATAACCACAGCTGAA +
Preference number: 1 (lower is better)
Translates to: QSAWRLEGNSKDHSA*CVSSRMRDWITTAE
Trigger: TTCAGCTGTGGTTATCCAATCCCTCATTCTTGATGACACACACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp TACCAGGAAAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTaGCCCTTCAAATGCCCCTTGGCGTGGAGCTCACATGATCTGAAC +
Preference number: 1 (lower is better)
Translates to: YQENTCLALMQSSTW*PFKCPLAWSSHDLN
Trigger: GTTCAGATCATGTGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTTTCCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp TATGCAGATCAGATGAGAGATTTGCCACGAACTCACTTGAGTAGTTaGGAGGGGCACGTGCATGTGAGGAGTGTCAGCATCTCACCAAAG +
Preference number: 1 (lower is better)
Translates to: YADQMRDLPRTHLSS*EGHVHVRSVSISPK
Trigger: CTTTGGTGAGATGCTGACACTCCTCACATGCACGTGCCCCTCCCAACTACTCAAGTGAGTTCGTGGCAAATCTCTCATCTGATCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp GCTCCCTGTTTCTTACGGCAGGTCCCACACCACTTTGTCCACCTCTaGTCGGACATTATGAGCCAAAACCTTTATCCAGAACACGATGTA +
Preference number: 1 (lower is better)
Translates to: APCFLRQVPHHFVHL*SDIMSQNLYPEHDV
Trigger: TACATCGTGTTCTGGATAAAGGTTTTGGCTCATAATGTCCGACCAGAGGTGGACAAAGTGGTGTGGGACCTGCCGTAAGAAACAGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp TGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTaGTCATGCAGACCCTGCCTCAAGTGGCATCACTTCTTAATTGAA +
Preference number: 1 (lower is better)
Translates to: WAVAGMAAFKLKPKK*SCRPCLKWHHFLIE
Trigger: TTCAATTAAGAAGTGATGCCACTTGAGGCAGGGTCTGCATGATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 90 bp CAAAACCTTTATCCAGAACACGATGTAGGTAGGAGAAAGAGAGGTTaGAGCAGAGTAAATGACCCAGTCACAGAACACGTGGCCAGATGG +
Preference number: 1 (lower is better)
Translates to: QNLYPEHDVGRRKRG*SRVNDPVTEHVARW
Trigger: CCATCTGGCCACGTGTTCTGTGACTGGGTCATTTACTCTGCTGCAACCTCTCTTTCTCCTACCTACATCGTGTTCTGGATAAAGGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 90 bp TGGCTGCTCAGGGACAAGCTTTTAGTTCCGCTGTGTTGGTGCGTGTaGAACTGGCTTATTGATAAACCCACTTCTTTATCTTACTGTCCC +
Preference number: 1 (lower is better)
Translates to: WLLRDKLLVPLCWCV*NWLIDKPTSLSYCP
Trigger: GGGACAGTAAGATAAAGAAGTGGGTTTATCAATAAGCCAGTTGCACACGCACCAACACAGCGGAACTAAAAGCTTGTCCCTGAGCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp ACCTCTGTCTGGCTGCTCAGGGACAAGCTTTTAGTTCCGCTGTGTTaGTGCGTGTGCAACTGGCTTATTGATAAACCCACTTCTTTATCT +
Preference number: 1 (lower is better)
Translates to: TSVWLLRDKLLVPLC*CVCNWLIDKPTSLS
Trigger: AGATAAAGAAGTGGGTTTATCAATAAGCCAGTTGCACACGCACCAACACAGCGGAACTAAAAGCTTGTCCCTGAGCAGCCAGACAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 90 bp CTGTTCAGACAGCGAGGAGATGGAAATCTTGTCAAATGGGAGACCTaGGCTCTTAAACCTGACTTGGCCACTTCCAAATATCTGGAAGTC +
Preference number: 1 (lower is better)
Translates to: LFRQRGDGNLVKWET*ALKPDLATSKYLEV
Trigger: GACTTCCAGATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAAGATTTCCATCTCCTCGCTGTCTGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp AGCCTGGTGTGTGTCATCAAGAATGAGGGATTGGATAACCACAGCTaGAACCTGTTCAGACAGCGAGGAGATGGAAATCTTGTCAAATGG +
Preference number: 1 (lower is better)
Translates to: SLVCVIKNEGLDNHS*NLFRQRGDGNLVKW
Trigger: CCATTTGACAAGATTTCCATCTCCTCGCTGTCTGAACAGGTTTCAGCTGTGGTTATCCAATCCCTCATTCTTGATGACACACACCAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp TCTAAAGACCATTCAGCCTGGTGTGTGTCATCAAGAATGAGGGATTaGATAACCACAGCTGAAACCTGTTCAGACAGCGAGGAGATGGAA +
Preference number: 1 (lower is better)
Translates to: SKDHSAWCVSSRMRD*ITTAETCSDSEEME
Trigger: TTCCATCTCCTCGCTGTCTGAACAGGTTTCAGCTGTGGTTATCCAATCCCTCATTCTTGATGACACACACCAGGCTGAATGGTCTTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 90 bp AGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATGTaGAGTATTTCCACAGCCGTGGCAGGAACACATAACTGGCACTAT +
Preference number: 1 (lower is better)
Translates to: RFSGKWIQNSPGMQM*SISTAVAGTHNWHY
Trigger: ATAGTGCCAGTTATGTGTTCCTGCCACGGCTGTGGAAATACTTCACATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CCA 90 bp GCTGACATGCACAAGAGGTATCTAAATGTCCTTCCTCTTGGGACTTaGTTAACCCTGTTGCTATCATTCAGCTCTTCTCAGACCCCTATA +
Preference number: 1 (lower is better)
Translates to: ADMHKRYLNVLPLGT*LTLLLSFSSSQTPI
Trigger: TATAGGGGTCTGAGAAGAGCTGAATGATAGCAACAGGGTTAACCAAGTCCCAAGAGGAAGGACATTTAGATACCTCTTGTGCATGTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 90 bp GTTCAAGAACTTGGAGAAGTCCAGAAGCTCTCCAAGGCATTCATATaGAGCCCACCTCATTTTACTTGCCATCAGAGGGAAAATATCAGC +
Preference number: 1 (lower is better)
Translates to: VQELGEVQKLSKAFI*SPPHFTCHQRENIS
Trigger: GCTGATATTTTCCCTCTGATGGCAAGTAAAATGAGGTGGGCTTCATATGAATGCCTTGGAGAGCTTCTGGACTTCTCCAAGTTCTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp ATGAGGTTTGAGTTAGCACTGGAGTTATTTGGAGGGATGGTAGCCTaGGCTTTTCAATCACTGGAAACGATTAAAAGCCAGAACAACCTG +
Preference number: 1 (lower is better)
Translates to: MRFELALELFGGMVA*AFQSLETIKSQNNL
Trigger: CAGGTTGTTCTGGCTTTTAATCGTTTCCAGTGATTGAAAAGCCCAGGCTACCATCCCTCCAAATAACTCCAGTGCTAACTCAAACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp ATGTCAGGAGATTTTGATGAAGTAAATTATGATCCGCCCACTCAGTaGGTGCTTCAAAGCTTCATCAAGCAGCCAGCAAACACAAGGAAG +
Preference number: 1 (lower is better)
Translates to: MSGDFDEVNYDPPTQ*VLQSFIKQPANTRK
Trigger: CTTCCTTGTGTTTGCTGGCTGCTTGATGAAGCTTTGAAGCACCCACTGAGTGGGCGGATCATAATTTACTTCATCAAAATCTCCTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp CTCAGGGACAAGCTTTTAGTTCCGCTGTGTTGGTGCGTGTGCAACTaGCTTATTGATAAACCCACTTCTTTATCTTACTGTCCCTTTCAA +
Preference number: 1 (lower is better)
Translates to: LRDKLLVPLCWCVCN*LIDKPTSLSYCPFQ
Trigger: TTGAAAGGGACAGTAAGATAAAGAAGTGGGTTTATCAATAAGCCAGTTGCACACGCACCAACACAGCGGAACTAAAAGCTTGTCCCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 90 bp GGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCTaGAAGTCTATTTCAGAAGAGTTAAATTATTCTGTGCAGGTCTGG +
Preference number: 1 (lower is better)
Translates to: GRPELLNLTWPLPNI*KSISEELNYSVQVW
Trigger: CCAGACCTGCACAGAATAATTTAACTCTTCTGAAATAGACTTCCAGATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 90 bp ATGGAAATCTTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTaGCCACTTCCAAATATCTGGAAGTCTATTTCAGAAGAGTTAAAT +
Preference number: 1 (lower is better)
Translates to: MEILSNGRPELLNLT*PLPNIWKSISEELN
Trigger: ATTTAACTCTTCTGAAATAGACTTCCAGATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAAGATTTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCCTGCCATGGCACCACTaGTCGTGCCAAGCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGLPWHH*SCQACP
Trigger: GGGGCAGGCTTGGCACGAGCAGTGGTGCCATGGCAG...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CAA 90 bp GCTGCTCCGCGAAACTGCGGACTAGGAGGAAGCTGGCTGTCCTGCTaGCCTGCCTGCCTGCCTGCCTGCCTGCCGCTCCTTCGCCACGTG +
Preference number: 2 (lower is better)
Translates to: AAPRNCGLGGSWLSC*PACLPACLPLLRHV
Trigger: CACGTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCAGTTTCGCGGAGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCTGGCACCACTGCTCGTaGCAAGCCTGCCCCATCGAC +
Preference number: 2 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGWHHCS*QACPID
Trigger: GTCGATGGGGCAGGCTTGGCACGAGCAGTGGTGCCA...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp GCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCGCTGAGTCCAGCCCAAGACCTAGCAGCTTGTaGCAGGCGGGGCCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: AAPSPRARRGSDCAESSPRPSSL*QAGPGW
Trigger: CCAGCCTGGCCCCGCCTGTCACAAGCTGCTAGGTCT...TGGGCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCGATGCCACAGTGCCCTaGCATGGCACCACTGCTCGT +
Preference number: 2 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGDATVP*HGTTAR
Trigger: ACGAGCAGTGGTGCCATGGCAGGGCACTGTGGCATC...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CAA 90 bp GCCTCTACCCCGAACTTGGTGATGCAGTACGGGGAGCGGGCCGGGTaGGCCATGCGGCCCAGCATGCTGCTGATATTGACGACGCGGCCT +
Preference number: 2 (lower is better)
Translates to: ASTPNLVMQYGERAG*AMRPSMLLILTTRP
Trigger: AGGCCGCGTCGTCAATATCAGCAGCATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCCGTACTGCATCACCAAGTTCGGGGTAGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAGGCCCGGGAGGCAGCTaGATTGCCCATTGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPGPGGS*IAHCEA
Trigger: GGCCTCACAATGGGCAATTCAGCTGCCTCCCGGGCC...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp GCTGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGCCTGCCTCAGCCTCCTaGGTAGCCGGGACTACAGGC +
Preference number: 2 (lower is better)
Translates to: AADSGGLSPSGSTCPQAKPASAS*VAGTTG
Trigger: GCCTGTAGTCCCGGCTACTCAGGAGGCTGAGGCAGG...CTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR GCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAAACCCAACCTGGGGCTaGCTGAGCCAGGGGAGCCTC +
Preference number: 2 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPNPTWG*LSQGSL
Trigger: GAGGCTCCCCTGGCTCAGGCAGCCCCAGGTTGGGTT...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 90 bp TGGCCGGTACAGCAGTGTACCCAGTGCAGTCCACCACGCCCGCACTaGTCTGGCAGCAGAGTTGAGCGGCACTTCCAGGCCCCAGGAACC +
Preference number: 2 (lower is better)
Translates to: WPVQQCTQCSPPRPH*SGSRVERHFQAPGT
Trigger: GGTTCCTGGGGCCTGGAAGTGCCGCTCAACTCTGCTGCCAGACAAGTGCGGGCGTGGTGGACTGCACTGGGTACACTGCTGTACCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCTCCAGCCTAGGGGACTaGGCAAGACTGTGTCTGGAA +
Preference number: 2 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGSSLGD*ARLCLE
Trigger: TTCCAGACACAGTCTTGCTCAGTCCCCTAGGCTGGA...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp GCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCGCTGAGTCCAGCCCATGCACTTGGCCCCTGTaGCTGGTTGCTGTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: AAPSPRARRGSDCAESSPCTWPL*LVAVWP
Trigger: TGGCCAGACAGCAACCAGGCACAGGGGCCAAGTGCA...TGGGCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGAGCTTGCCTGCCTGCCTaGCTGCCTGCCTGCCGCTCC +
Preference number: 2 (lower is better)
Translates to: TSRPLGDSTDTADTRATRACLPA*LPACRS
Trigger: GGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGC...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCACAGCAGTGTACCCAGTaGAGTCCACCACGCCCGCAC +
Preference number: 2 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPQQCTQ*SPPRPH
Trigger: GTGCGGGCGTGGTGGACTGCACTGGGTACACTGCTG...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCATGCAGAGGTACCAGTaGGCACTTGGTGTGTGCTGC +
Preference number: 2 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGMQRYQ*ALGVCC
Trigger: GCAGCACACACCAAGTGCCCACTGGTACCTCTGCAT...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp CACCGCGCCCGGCCACGCACTCTGGTAAAGACGAAAACTACGTCCTGCGCCCCGCACAGTGCCCTGCCATaGCACCACTGCTCGTGCCAA +
Preference number: 2 (lower is better)
Translates to: HRARPRTLVKTKTTSCAPHSALP*HHCSCQ
Trigger: TTGGCACGAGCAGTGGTGCCATGGCAGGGCACTGTG...CGGGGCGCAGGACGTAGTTTTCGTCTTTACCAGAGTGCGTGGCCGGGCGCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 90 bp ATCGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATaGTACCTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: IGSSSALPITAPEVP*YLHWNESPSVPPAC
Trigger: GCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCTCCACACCCTGTTTGTaGAGGCCCAAGTCACTCACT +
Preference number: 2 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGSTPCL*RPKSLT
Trigger: AGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGA...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp TGCGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTGCCTGCAAAGCCAGAACAACCTaGACAGGCCGGCCCAGCAGT +
Preference number: 2 (lower is better)
Translates to: CGLGGSWLSCLPACLPACKARTT*TGRPSS
Trigger: ACTGCTGGGCCGGCCTGTGCAGGTTGTTCTGGCTTT...GCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAAGCCAGGGGAGCCTCTaGTTGCTCATGTCGGCTCCT +
Preference number: 2 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPSQGSL*LLMSAP
Trigger: AGGAGCCGACATGAGCAAGCAGAGGCTCCCCTGGCT...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAAGGCGAGGTTCTGACTaGGCTGAGTCCAGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPRRGSD*AESSPA
Trigger: AGCTGGGCTGGACTCAGCGCAGTCAGAACCTCGCCT...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp AGGTGCTCTGTAACAAGGCACTGTCAGGCGCATCTTGCAAGAAGCCCTTGCCCATTCGAAGGCGGGCACTaGGGACCCTGCCCCGGGCCG +
Preference number: 2 (lower is better)
Translates to: RCSVTRHCQAHLARSPCPFEGGH*GPCPGP
Trigger: CGGCCCGGGGCAGGGTCCCCAGTGCCCGCCTTCGAA...TGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGTGCCTTGTTACAGAGCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 90 bp CTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCATaGGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGGGAAGAGTC +
Preference number: 2 (lower is better)
Translates to: LRPSHHSPGSPIVPP*EREPISPASLQGRV
Trigger: GACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp GTACCTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGGGAAGAGTCTCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 2 (lower is better)
Translates to: VPPLEREPISPASLQGRVSTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...GACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCGCATCACTTCTTAATTaGAAAGAGGCCGAGGCGAGG +
Preference number: 2 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGASLLN*KEAEAR
Trigger: CCTCGCCTCGGCCTCTTTTCAATTAAGAAGTGATGC...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp GCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCGCTGAGTCCAGCCCAACAGCACCATGGACATaGAGAGGTACCAGTGGGCAC +
Preference number: 2 (lower is better)
Translates to: AAPSPRARRGSDCAESSPTAPWT*RGTSGH
Trigger: GTGCCCACTGGTACCTCTGCATGTCCATGGTGCTGT...TGGGCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp GAACTTGGTGATGCAGTACGGGGAGCGGGCCGGGTTGGCCATGCGGCCCAGCATCCACGGCGCCCGGCCTaGCATTCAAATTTTGTACCA +
Preference number: 2 (lower is better)
Translates to: ELGDAVRGAGRVGHAAQHPRRPA*HSNFVP
Trigger: TGGTACAAAATTTGAATGGCAGGCCGGGCGCCGTGG...ATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCCGTACTGCATCACCAAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCGTATTTCCACAGCCGTaGCAGGAACACATAACTGGC +
Preference number: 2 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGVFPQP*QEHITG
Trigger: GCCAGTTATGTGTTCCTGCCACGGCTGTGGAAATAC...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp CCAGCCTGCAGGGAAGAGTCTGATGCCCCTCGTGACATCACCGAGCTCTCCCGACCCCCTGGAGGACAGTaGTGTTTGGCTTCGGTCCCA +
Preference number: 2 (lower is better)
Translates to: PACREESDAPRDITELSRPPGGQ*CLASVP
Trigger: TGGGACCGAAGCCAAACACCACTGTCCTCCAGGGGG...TCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGAGGCGATCCGACCGCCTaGGCCTCCCAAAATGCTGGG +
Preference number: 2 (lower is better)
Translates to: TSRPLGDSTDTADTRATRGDPTA*ASQNAG
Trigger: CCCAGCATTTTGGGAGGCCCAGGCGGTCGGATCGCC...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAAGTGGCAGGACCCCATaGTTGCTACTGTGCGTAGGC +
Preference number: 2 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPSGRTP*LLLCVG
Trigger: GCCTACGCACAGTAGCAACCATGGGGTCCTGCCACT...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp TGCGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTGCCTGCTCACCATGTTTGCCCTaGGATTTAGAGGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: CGLGGSWLSCLPACLPACSPCLP*DLEASA
Trigger: GGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGA...GCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp CCAGCCTGCAGGGAAGAGTCTGATGCCCCTCGTGACATCACCGAGCTCTCCCGAGTAATCCCAGCACTCTaGGAGGTCGAGGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: PACREESDAPRDITELSRVIPAL*EVEAGG
Trigger: TCCACCTGCCTCGACCTCTCAGAGTGCTGGGATTAC...TCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp GTACCTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGGGAAGAGTCCCCCAGTGTGGAGACTaGGGCAGCCTGAGGGTAAAG +
Preference number: 2 (lower is better)
Translates to: VPPLEREPISPASLQGRVPQCGD*GSLRVK
Trigger: CTTTACCCTCAGGCTGCCTCAGTCTCCACACTGGGG...GACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTTGCTCGTGCCAAGCCTaGCCCATCGACACCGGCCCC +
Preference number: 2 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCCSCQA*PIDTGP
Trigger: GGGGCCGGTGTCGATGGGGCAGGCTTGGCACGAGCA...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp GTACCTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGGGAAGAGTCAGGCTGGCTGTCACCTaGTCACACAGCCTCTTGGCC +
Preference number: 2 (lower is better)
Translates to: VPPLEREPISPASLQGRVRLAVT*SHSLLA
Trigger: GGCCAAGAGGCTGTGTGAGCAGGTGACAGCCAGCCT...GACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAGGGATGGGTTTGTGCTaGCTGGAGTCACCAGACCAT +
Preference number: 2 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPGMGLC*LESPDH
Trigger: ATGGTCTGGTGACTCCAGCCAGCACAAACCCATCCC...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp CTTGGTGATGCAGTACGGGGAGCGGGCCGGGTTGGCCATGCGGCCCAGCATGCTCTGCAGACATTGAGCTaGACGGTTCTCAATCGGTCA +
Preference number: 2 (lower is better)
Translates to: LGDAVRGAGRVGHAAQHALQTLS*TVLNRS
Trigger: TGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAG...AGCATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCCGTACTGCATCACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCCACACAAGTCTATCCTaGGTCCTAAAAGAGGATGGA +
Preference number: 2 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGHTSLS*VLKEDG
Trigger: TCCATCCTCTTTTAGGACTCAGGATAGACTTGTGTG...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp ACTGTCAGGCGCATCTTGCAAGAAGCCCTTGCCCAGCCTCCAACCATCAGGGGACTGGTCTTGAACTCCTaGCCTCAGGCGATCCGACCG +
Preference number: 2 (lower is better)
Translates to: TVRRILQEALAQPPTIRGLVLNS*PQAIRP
Trigger: CGGTCGGATCGCCTGAGGTCAGGAGTTCAAGACCAG...TCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp TGCGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTGCCTGCGCTAAGCACAGCAGGTaGTCTGTAACAAGGCACTGT +
Preference number: 2 (lower is better)
Translates to: CGLGGSWLSCLPACLPACAKHSR*SVTRHC
Trigger: ACAGTGCCTTGTTACAGAGCACCTGCTGTGCTTAGC...GCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp CTTGACAGAGCCGACTTCCCGCTGGAAGGATACTGGGGGCTCCTCCAGCACATTGAGAGGAAGCTGTGGTaGCTGGGTAGCAGGACCTGC +
Preference number: 2 (lower is better)
Translates to: LDRADFPLEGYWGLLQHIERKLW*LGSRTC
Trigger: GCAGGTCCTGCTACCCAGCCACCACAGCTTCCTCTC...AATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp ATGGAATCGAGCCTCTCACTTCCCGGCCCAAGTCATGCCCACGGTTACCCTGTGGGTGAGAGGAAGCTGTaGTGGCTGGGTAGCAGGACC +
Preference number: 2 (lower is better)
Translates to: MESSLSLPGPSHAHGYPVGERKL*WLGSRT
Trigger: GGTCCTGCTACCCAGCCACCACAGCTTCCTCTCACC...CACAGGGTAACCGTGGGCATGACTTGGGCCGGGAAGTGAGAGGCTCGATTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAGGATCTTGCGGGGTCTaGATCTTGGCTCTCTCGTTT +
Preference number: 2 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPGSCGV*ILALSF
Trigger: AAACGAGAGAGCCAAGATCCAGACCCCGCAAGATCC...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp GCTGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGGATCCGCCCACTCAGTaGGTGCTTCAAAGCTTCATC +
Preference number: 2 (lower is better)
Translates to: AADSGGLSPSGSTCPQAKDPPTQ*VLQSFI
Trigger: GATGAAGCTTTGAAGCACCCACTGAGTGGGCGGATC...CTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp CTCCTCCCACATCTTCTTGGCGATGGCCTGAATGCTCTCAGGGCTGTAAAGGCTGCTGGCTGCAGACTCTaGTGGCCTGTCCCCCTCAGG +
Preference number: 2 (lower is better)
Translates to: LLPHLLGDGLNALRAVKAAGCRL*WPVPLR
Trigger: CCTGAGGGGGACAGGCCACCAGAGTCTGCAGCCAGC...AGCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp GCCCAGCATGCTGCTGATATTGACGACGCGGCCTTTGGCCCTTCGGATGAGGGGCCGCCTGGTTTTCCATaGAAAGGAAGCCTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: AQHAADIDDAAFGPSDEGPPGFP*KGSLPS
Trigger: ACTGGGGAGGCTTCCTTTCCATGGAAAACCAGGCGG...CCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 90 bp CTTGCAAGAAGCCCTTGCCCAGCCTCCAACCATCAGGGGATGGGTTaGTGCTGGCTGGAGTCACCAGACCATAGGTCCGCACAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: LARSPCPASNHQGMG*CWLESPDHRSAQAK
Trigger: CTTTGCCTGTGCGGACCTATGGTCTGGTGACTCCAGCCAGCACAAACCCATCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 90 bp CTGGCCAACCCAACCTGGGGCTGCCTGAGCCAGGGGAGCCTCTGCTaGCTCATGTCGGCTCCTATATCAACACAGTTTGCACAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: LANPTWGCLSQGSLC*LMSAPISTQFAQVC
Trigger: GCAAACCTGTGCAAACTGTGTTGATATAGGAGCCGACATGAGCAAGCAGAGGCTCCCCTGGCTCAGGCAGCCCCAGGTTGGGTTGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCTGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp GAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGACCCACCCCAGGAACCCCAGAGTCACAGCCTGTaGCCAGGACAGCTTTGCTGC +
Preference number: 2 (lower is better)
Translates to: EESNATLLSSLTDPPQEPQSHSL*PGQLCC
Trigger: GCAGCAAAGCTGTCCTGGTCACAGGCTGTGACTCTG...GGGTTCCTGGGGTGGGTCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR GCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTTGGCACCACTGCTCGTaGCAAGCCTGCCCCATCGAC +
Preference number: 2 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCWHHCS*QACPID
Trigger: GTCGATGGGGCAGGCTTGGCACGAGCAGTGGTGCCA...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCACTGCCATGGCACCACTaGTCGTGCCAAGCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPLPWHH*SCQACP
Trigger: GGGGCAGGCTTGGCACGAGCAGTGGTGCCATGGCAG...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGAGAAGGAGCGGCTCTCTaGCAGCAGACAAGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: TSRPLGDSTDTADTRATREGAAL*QQTSSE
Trigger: CTCACTGCTTGTCTGCTGGCAGAGAGCCGCTCCTTC...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp ACGGCTTCAGGCTCCCGAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGACCAGGAACCCTCACCTaGCTTTGGGCAGCCTCCACA +
Preference number: 2 (lower is better)
Translates to: TASGSRGEQRYPPIFTDRPGTLT*LWAAST
Trigger: TGTGGAGGCTGCCCAAAGGCAGGTGAGGGTTCCTGG...TCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTCGGGAGCCTGAAGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAAGTCACACAGCACCATaGACATGCAGAGGTACCAGT +
Preference number: 2 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPSHTAP*TCRGTS
Trigger: ACTGGTACCTCTGCATGTCCATGGTGCTGTGTGACT...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp GCCCCTCAGAATGTGACACTAATATGGCACTGGGACCATCGGCAGCTCCTCCGCTCACTGGCTGCTGGCTaGCCAGTCACACAGCACCAT +
Preference number: 2 (lower is better)
Translates to: APQNVTLIWHWDHRQLLRSLAAG*PVTQHH
Trigger: ATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGA...GCGGAGGAGCTGCCGATGGTCCCAGTGCCATATTAGTGTCACATTCTGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCCCCCTGGAGGACAGTaGTGTTTGGCTTCGGTCCCA +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGPPGGQ*CLASVP
Trigger: TGGGACCGAAGCCAAACACCACTGTCCTCCAGGGGG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp AACCTGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCAAGGGAAGGAGGGTCTaGCTCGAGTGGCAGGACCCC +
Preference number: 2 (lower is better)
Translates to: NLSQSAWRLEGNSKDHSAKGRRV*LEWQDP
Trigger: GGGGTCCTGCCACTCGAGCCAGACCCTCCTTCCCTT...GGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 90 bp GTGCTCTGTAACAAGGCACTGTCAGGCGCATCTTGCAAGAAGCCCTaGCCCAGCCTCCAACCATCAGGGGATGGGTTTGTGCTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: VLCNKALSGASCKKP*PSLQPSGDGFVLAG
Trigger: TCCAGCCAGCACAAACCCATCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGTGCCTTGTTACAGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCTCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 2 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTSTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
3UTR-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCCCATACAGCCAGCTCTaGGTCACTGGCTGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIPYSQL*VTGCWL
Trigger: CAGCCAGCAGCCAGTGACTCAGAGCTGGCTGTATGG...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCTGTGTAAGCACCACGTaGGGCAAGCAGGGACCCCAA +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGCVSTT*GKQGPQ
Trigger: TTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACA...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp CCAGCCTGCAGGGAAGAGTCTGATGCCCCTCGTGACATCACCGAGCTCTCCCGACTGAAGGGTGCTGCTTaGTTCTTTGTTCCCGGTTTC +
Preference number: 2 (lower is better)
Translates to: PACREESDAPRDITELSRLKGAA*FFVPGF
Trigger: GAAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAG...TCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCTTCTTCCTTGGCACTaGCTGAACCCCGTAGCCCAC +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGLLPWH*LNPVAH
Trigger: GTGGGCTACGGGGTTCAGGCAGTGCCAAGGAAGAAG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp GTACCTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGGGAAGAGTCAGGGGAGCCTCTGCTTaGTCATGTCGGCTCCTATAT +
Preference number: 2 (lower is better)
Translates to: VPPLEREPISPASLQGRVRGASA*SCRLLY
Trigger: ATATAGGAGCCGACATGAGCAAGCAGAGGCTCCCCT...GACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp GCCCAGCATGCTGCTGATATTGACGACGCGGCCTTTGGCCCTTCGGATGAGGGGTTCACTAGGAAAACCTaGCAAGGTAACCCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: AQHAADIDDAAFGPSDEGFTRKT*QGNPLS
Trigger: GGACAGGGGGTTACCTTGGCAGGTTTTCCTAGTGAA...CCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR GCA 90 bp GCCCAGCATGCTGCTGATATTGACGACGCGGCCTTTGGCCCTTCGGATGAGGGGCCAAAGGTTCACTTCTaGCACCTGCTTGTAGGTCTC +
Preference number: 2 (lower is better)
Translates to: AQHAADIDDAAFGPSDEGPKVHF*HLLVGL
Trigger: GAGACCTACAAGCAGGTGGCAGAAGTGAACCTTTGG...CCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTTCGAAGGCGGGCACTaGGGACCCTGCCCCGGGCCG +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSFEGGH*GPCPGP
Trigger: CGGCCCGGGGCAGGGTCCCCAGTGCCCGCCTTCGAA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp CCAGCCTGCAGGGAAGAGTCTGATGCCCCTCGTGACATCACCGAGCTCTCCCGAGGAGGGATGGTAGCCTaGGCTTTTCAATCACTGGAA +
Preference number: 2 (lower is better)
Translates to: PACREESDAPRDITELSRGGMVA*AFQSLE
Trigger: TTCCAGTGATTGAAAAGCCCAGGCTACCATCCCTCC...TCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp GCCCCTCAGAATGTGACACTAATATGGCACTGGGACCATCGGCAGCTCCTCCGCGAGGTTAGATCTGGCTaGACACCCAGCTCTACCCCT +
Preference number: 2 (lower is better)
Translates to: APQNVTLIWHWDHRQLLREVRSG*TPSSTP
Trigger: AGGGGTAGAGCTGGGTGTCCAGCCAGATCTAACCTC...GCGGAGGAGCTGCCGATGGTCCCAGTGCCATATTAGTGTCACATTCTGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGAGGTATAGAAGTCAGATaGGGCTGGGTGCAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: TSRPLGDSTDTADTRATRGIEVR*GWVQWL
Trigger: GAGCCACTGCACCCAGCCCCATCTGACTTCTATACC...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp CAGGTACCAGGAAAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTGGCCCCGGCTCCGCCGCACTaGCATAAGTCCGACGGCCAA +
Preference number: 2 (lower is better)
Translates to: QVPGKHVSCFNAVFHLVAPAPPH*HKSDGQ
Trigger: TTGGCCGTCGGACTTATGCCAGTGCGGCGGAGCCGG...GGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTTTCCTGGTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp GTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCCTCAGGGGAAACCCCCGGGAAGAACCCTTCTTaGTGTGATCTTTCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: VPLHSITTRSLQSSGETPGKNPS*CDLSSL
Trigger: GAGGGAGGAAAGATCACACCAAGAAGGGTTCTTCCC...GGGGGTTTCCCCTGAGGACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 90 bp CCCTCAAGCCCTTTGAGGGCAGCTCCAGAATCCAGCTCTGCCTGCTaGGTCTTTGAATTCCTAGAGCCTGCTCTCGGGAATGGCCTTGAC +
Preference number: 2 (lower is better)
Translates to: PSSPLRAAPESSSAC*VFEFLEPALGNGLD
Trigger: GTCAAGGCCATTCCCGAGAGCAGGCTCTAGGAATTCAAAGACCAAGCAGGCAGAGCTGGATTCTGGAGCTGCCCTCAAAGGGCTTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp GAACTTGGTGATGCAGTACGGGGAGCGGGCCGGGTTGGCCATGCGGCCCAGCATTGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: ELGDAVRGAGRVGHAAQHWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...ATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCCGTACTGCATCACCAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp CTTGCGCACGACCTCAGGCAGCTCCTCCCACATCTTCTTGGCGATGGCCTGAATTCCACACCCTGTTTGTaGAGGCCCAAGTCACTCACT +
Preference number: 2 (lower is better)
Translates to: LAHDLRQLLPHLLGDGLNSTPCL*RPKSLT
Trigger: AGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGA...ATTCAGGCCATCGCCAAGAAGATGTGGGAGGAGCTGCCTGAGGTCGTGCGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp CTTGACAGAGCCGACTTCCCGCTGGAAGGATACTGGGGGCTCCTCCAGCACATTTGTGTGCTGCCCAGATaGGGACACAGAGTTAGTCAG +
Preference number: 2 (lower is better)
Translates to: LDRADFPLEGYWGLLQHICVLPR*GHRVSQ
Trigger: CTGACTAACTCTGTGTCCTCATCTGGGCAGCACACA...AATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAAGGCGGAGGTTGCAGTaGGCGGAGATGGTGCCATTG +
Preference number: 2 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPRRRLQ*AEMVPL
Trigger: CAATGGCACCATCTCCGCTCACTGCAACCTCCGCCT...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTTGTGTAAGCACCACGTaGGGCAAGCAGGGACCCCAA +
Preference number: 2 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCCVSTT*GKQGPQ
Trigger: TTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACA...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp TGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCTGGTTGTGTAAGCACCACGTaGGGCAAGCAGGGACCCCAA +
Preference number: 2 (lower is better)
Translates to: CLRALGGLRGTLKTIQPGCVSTT*GKQGPQ
Trigger: TTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACA...ACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp TGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCTGGTGGTCTAGGTGCCTGGTaGCCCCAACTGGCTTTGCTT +
Preference number: 2 (lower is better)
Translates to: CLRALGGLRGTLKTIQPGGLGAW*PQLALL
Trigger: AAGCAAAGCCAGTTGGGGTCACCAGGCACCTAGACC...ACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp GCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCGCTGAGTCCAGCCCACTTGCTCTGTCTCTTTaGGCAGAAATCATCACTAAC +
Preference number: 2 (lower is better)
Translates to: AAPSPRARRGSDCAESSPLALSL*AEIITN
Trigger: GTTAGTGATGATTTCTGCTCAAAGAGACAGAGCAAG...TGGGCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp CTGTGGCCTCCAGACTCCAGGGCACACATGGTAAGCCAAGAAGCTCTCCGGGGACAGATGCTTGGCCAATaGGAACCCAAATCCAGAGTC +
Preference number: 2 (lower is better)
Translates to: LWPPDSRAHMVSQEALRGQMLGQ*EPKSRV
Trigger: GACTCTGGATTTGGGTTCTCATTGGCCAAGCATCTG...TCCCCGGAGAGCTTCTTGGCTTACCATGTGTGCCCTGGAGTCTGGAGGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp GTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCCTCAGGGGAAACCCCCGAACCCTTCTTGGTGTaGTCTTTCCTCCCTCTTGAA +
Preference number: 2 (lower is better)
Translates to: VPLHSITTRSLQSSGETPEPFLV*SFLPLE
Trigger: TTCAAGAGGGAGGAAAGATCACACCAAGAAGGGTTC...GGGGGTTTCCCCTGAGGACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp ATGCAGTCTTCCACCTGGTGGCCCTTCAAATGCCCCTTGGCGTGGAGCTCACATCAGCCCAGCCTGGTTTaGGAACCCAAACTCCCAAAC +
Preference number: 2 (lower is better)
Translates to: MQSSTWWPFKCPLAWSSHQPSLV*EPKLPN
Trigger: GTTTGGGAGTTTGGGTTCTCAAACCAGGCTGGGCTG...ATGTGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR GCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCGCACTTGGTGTGTGCTaGCCAGATGAGGACACAGAG +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGALGVC*PDEDTE
Trigger: CTCTGTGTCCTCATCTGGGCAGCACACACCAAGTGC...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp CTTGCGCACGACCTCAGGCAGCTCCTCCCACATCTTCTTGGCGATGGCCTGAATCAGGCAACTGTTTCCTaGCCAGGTAGAAGGATAGCC +
Preference number: 2 (lower is better)
Translates to: LAHDLRQLLPHLLGDGLNQATVS*PGRRIA
Trigger: GGCTATCCTTCTACCTGGGCAGGAAACAGTTGCCTG...ATTCAGGCCATCGCCAAGAAGATGTGGGAGGAGCTGCCTGAGGTCGTGCGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACAAGAGTTGACTATATaGGTTCCTCCCTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVQELTI*VPPSPP
Trigger: GGGAGGGGAGGGAGGAACCCATATAGTCAACTCTTG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTTCACTGGCTGCTGGCTaGCCAGTCACACAGCACCAT +
Preference number: 2 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCSLAAG*PVTQHH
Trigger: ATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGA...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCAGAGCCGACTTCCCGCTaGAAGGATACTGGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGAEPTSR*KDTGGS
Trigger: GGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTC...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCAGAACACGTGGCCAGATaGCCCCGCAGAGCACTCACC +
Preference number: 2 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGAEHVAR*PRRALT
Trigger: GGTGAGTGCTCTGCGGGGCCATCTGGCCACGTGTTC...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp GGTGCTGGTGGAGGTTGTCTTTCTCACTGTTTTCTAGCTCCTCTCCCCTCCTATCTGGCTGGGGCCACATaGATCCTCCCAGCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: GAGGGCLSHCFLAPLPSYLAGAT*ILPASS
Trigger: TGAGCTGGCTGGGAGGATCCATGTGGCCCCAGCCAG...ATAGGAGGGGAGAGGAGCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 90 bp CCCTGCCCAGCCCTGAGGGCTGTGGGAAGTAGGTGCTGGTGGAGGTaGTCTTTCTCACTGTTTTCTAGCTCCTCTCCCCTCCTATTCTTA +
Preference number: 2 (lower is better)
Translates to: PCPALRAVGSRCWWR*SFSLFSSSSPLLFL
Trigger: TAAGAATAGGAGGGGAGAGGAGCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACCTACTTCCCACAGCCCTCAGGGCTGGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCTCACCATGTTTGCCCTaGGATTTAGAGGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGSPCLP*DLEASA
Trigger: GGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGA...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCTGTGTGCTGCCCAGATaGGGACACAGAGTTAGTCAG +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGCVLPR*GHRVSQ
Trigger: CTGACTAACTCTGTGTCCTCATCTGGGCAGCACACA...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp TGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCTGGTCTACCCCTCACTTGGTaGCAGACTTGGGAAAGCCTG +
Preference number: 2 (lower is better)
Translates to: CLRALGGLRGTLKTIQPGLPLTW*QTWESL
Trigger: CAGGCTTTCCCAAGTCTGTCACCAAGTGAGGGGTAG...ACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGATCGCTGTTACGTAACTaGGGACTTCTTCCCTCCCTA +
Preference number: 2 (lower is better)
Translates to: TSRPLGDSTDTADTRATRSLLRN*GLLPSL
Trigger: TAGGGAGGGAAGAAGTCCTCAGTTACGTAACAGCGA...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGCTCGTGCCAAGCCTaGCCCATCGACACCGGCCCC +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSCSCQA*PIDTGP
Trigger: GGGGCCGGTGTCGATGGGGCAGGCTTGGCACGAGCA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp AACCTGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCCCACCCTGCCTATCCTaGCTGGGTTGCTGTGAGAAT +
Preference number: 2 (lower is better)
Translates to: NLSQSAWRLEGNSKDHSAPPCLS*LGCCEN
Trigger: ATTCTCACAGCAACCCAGGCAGGATAGGCAGGGTGG...GGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTCAGCTGCCCACCCCGTaGCTCCGAATGCGCCACTCG +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSQLPTP*LRMRHS
Trigger: CGAGTGGCGCATTCGGAGGCACGGGGTGGGCAGCTG...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp ATGCAGTCTTCCACCTGGTGGCCCTTCAAATGCCCCTTGGCGTGGAGCTCACATGCTGTGGGAAGTAGGTaGTGGTGGAGGTTGTCTTTC +
Preference number: 2 (lower is better)
Translates to: MQSSTWWPFKCPLAWSSHAVGSR*WWRLSF
Trigger: GAAAGACAACCTCCACCAGCACCTACTTCCCACAGC...ATGTGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCAAGAGTTGACTATATaGGTTCCTCCCTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGQELTI*VPPSPP
Trigger: GGGAGGGGAGGGAGGAACCCATATAGTCAACTCTTG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp AACCTGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCATGCAGAGGTACCAGTaGGCACTTGGTGTGTGCTGC +
Preference number: 2 (lower is better)
Translates to: NLSQSAWRLEGNSKDHSAMQRYQ*ALGVCC
Trigger: GCAGCACACACCAAGTGCCCACTGGTACCTCTGCAT...GGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp TGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCTGGTATTAGCCCGGCATGGTaGTGGGTGCCTATAACCCCA +
Preference number: 2 (lower is better)
Translates to: CLRALGGLRGTLKTIQPGISPAW*WVPITP
Trigger: TGGGGTTATAGGCACCCACCACCATGCCGGGCTAAT...ACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp GCCCCTCAGAATGTGACACTAATATGGCACTGGGACCATCGGCAGCTCCTCCGCGAGGACAGTGGTGTTTaGCTTCGGTCCCAACATACA +
Preference number: 2 (lower is better)
Translates to: APQNVTLIWHWDHRQLLREDSGV*LRSQHT
Trigger: TGTATGTTGGGACCGAAGCCAAACACCACTGTCCTC...GCGGAGGAGCTGCCGATGGTCCCAGTGCCATATTAGTGTCACATTCTGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCAAGCAGGACCTGCACTTaGCCCCTGTGCCTGGTTGCT +
Preference number: 2 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGASRTCT*PLCLVA
Trigger: AGCAACCAGGCACAGGGGCCAAGTGCAGGTCCTGCT...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp GCCTGCTTGGTCTTTGAATTCCTAGAGCCTGCTCTCGGGAATGGCCTTGACAGACCGCTGGAAGGATACTaGGGGCTCCTCCAGCACATT +
Preference number: 2 (lower is better)
Translates to: ACLVFEFLEPALGNGLDRPLEGY*GLLQHI
Trigger: AATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGG...TCTGTCAAGGCCATTCCCGAGAGCAGGCTCTAGGAATTCAAAGACCAAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp GCCCCTCAGAATGTGACACTAATATGGCACTGGGACCATCGGCAGCTCCTCCGCGGCTCTCTCGTTTCCTaGCTCTGTGATTTTGGGCAA +
Preference number: 2 (lower is better)
Translates to: APQNVTLIWHWDHRQLLRGSLVS*LCDFGQ
Trigger: TTGCCCAAAATCACAGAGCCAGGAAACGAGAGAGCC...GCGGAGGAGCTGCCGATGGTCCCAGTGCCATATTAGTGTCACATTCTGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp CTTGCGCACGACCTCAGGCAGCTCCTCCCACATCTTCTTGGCGATGGCCTGAATTTAGTTCCGCTGTGTTaGTGCGTGTGCAACTGGCTT +
Preference number: 2 (lower is better)
Translates to: LAHDLRQLLPHLLGDGLNLVPLC*CVCNWL
Trigger: AAGCCAGTTGCACACGCACCAACACAGCGGAACTAA...ATTCAGGCCATCGCCAAGAAGATGTGGGAGGAGCTGCCTGAGGTCGTGCGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 90 bp CGGACAATCTCCACCACTTTCTCCACCTCTTCGCTGCTGCAGACATaGAGCTGGACGGTTCTCAATCGGTCACTGTTTAGGCTGTCCAGC +
Preference number: 2 (lower is better)
Translates to: RTISTTFSTSSLLQT*SWTVLNRSLFRLSS
Trigger: GCTGGACAGCCTAAACAGTGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGAAGAGGTGGAGAAAGTGGTGGAGATTGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCATCCAGCCTAGGGGACTaGGCAAGACTGTGTCTGGAA +
Preference number: 2 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPSSLGD*ARLCLE
Trigger: TTCCAGACACAGTCTTGCTCAGTCCCCTAGGCTGGA...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCGAGAACACTGTTTCTaGAGGGTGCTGCTTGCTTCT +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGREHCF*RVLLAS
Trigger: AGAAGCAAGCAGCACCCTTCAGAAACAGTGTTCTCG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp AGGTGCTCTGTAACAAGGCACTGTCAGGCGCATCTTGCAAGAAGCCCTTGCCCACCTTCCTACTTACTCTaGCAAGAAGGAGCGGCTCTC +
Preference number: 2 (lower is better)
Translates to: RCSVTRHCQAHLARSPCPPSYLL*QEGAAL
Trigger: GAGAGCCGCTCCTTCTTGTCAGAGTAAGTAGGAAGG...TGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGTGCCTTGTTACAGAGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp TGCCTTCGGACACAGCAGCCAGGCCGGAGGCTCGATGGTCTAAAGTTTGGCTCTCACAAGGAAGCCTTTTaGATGCAGATGCTTGGCCAA +
Preference number: 2 (lower is better)
Translates to: CLRTQQPGRRLDGLKFGSHKEAF*MQMLGQ
Trigger: TTGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTG...AGAGCCAAACTTTAGACCATCGAGCCTCCGGCCTGGCTGCTGTGTCCGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR GCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAGCACTTGGTGTGTGCTaGCCAGATGAGGACACAGAG +
Preference number: 2 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPALGVC*PDEDTE
Trigger: CTCTGTGTCCTCATCTGGGCAGCACACACCAAGTGC...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCTGCTCGTGCCAAGCCTaGCCCATCGACACCGGCCCC +
Preference number: 2 (lower is better)
Translates to: LSNGRPELLNLTWPLPNICSCQA*PIDTGP
Trigger: GGGGCCGGTGTCGATGGGGCAGGCTTGGCACGAGCA...GATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTGTAGCCCACTCCGGCTaGCCGGGCTCTTCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSVAHSG*PGSSAF
Trigger: GAAGGCAGAAGAGCCCGGGCAGCCGGAGTGGGCTAC...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp GCCTGCTTGGTCTTTGAATTCCTAGAGCCTGCTCTCGGGAATGGCCTTGACAGACCCAGTAGACGCACATaGAGCTTCTCTGACGTTCGG +
Preference number: 2 (lower is better)
Translates to: ACLVFEFLEPALGNGLDRPSRRT*SFSDVR
Trigger: CCGAACGTCAGAGAAGCTGCATGTGCGTCTACTGGG...TCTGTCAAGGCCATTCCCGAGAGCAGGCTCTAGGAATTCAAAGACCAAGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCAGACCCCAACTGGCTTTaGTTCCAGGGCTGTTGCGAG +
Preference number: 2 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGADPNWL*FQGCCE
Trigger: CTCGCAACAGCCCTGGAAGCAAAGCCAGTTGGGGTC...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp ACGGCTTCAGGCTCCCGAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGAAGCACAGGTGATATCTaGAGAGGAAGCTTCTGGGTC +
Preference number: 2 (lower is better)
Translates to: TASGSRGEQRYPPIFTDRSTGDI*RGSFWV
Trigger: GACCCAGAAGCTTCCTCTGCAGATATCACCTGTGCT...TCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTCGGGAGCCTGAAGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR GCA 90 bp AAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTGGCCCTTCAAATGCCCCAACCACCCTCAGCCTaGTGGCTGCAGACTCTGGTG +
Preference number: 2 (lower is better)
Translates to: KHVSCFNAVFHLVALQMPQPPSA*WLQTLV
Trigger: CACCAGAGTCTGCAGCCAGCAGGCTGAGGGTGGTTG...GGGCATTTGAAGGGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTCAAGAGTTGACTATATaGGTTCCTCCCTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCQELTI*VPPSPP
Trigger: GGGAGGGGAGGGAGGAACCCATATAGTCAACTCTTG...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCATAACCCCAGCTACTTaGAAGGCTGAGGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGITPAT*KAEAGE
Trigger: TTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGGTTAT...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTCCAAGCGTCCCCCTCTaGGCTCTGGAGGGTTTCGGC +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSPSVPL*ALEGFG
Trigger: GCCGAAACCCTCCAGAGCCCAGAGGGGGACGCTTGG...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CAA 90 bp AAAGGAGAAGCACATGGTGCTTCTGGGACCCAGCATCTCCTGAGGTaGGTCCCCATTCACTCTCCCTGTCTCTACACATCTCCACAGATG +
Preference number: 2 (lower is better)
Translates to: KGEAHGASGTQHLLR*VPIHSPCLYTSPQM
Trigger: CATCTGTGGAGATGTGTAGAGACAGGGAGAGTGAATGGGGACCAACCTCAGGAGATGCTGGGTCCCAGAAGCACCATGTGCTTCTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTATCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 2 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLSTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
3UTR-3UTR TCA 90 bp GCCCAGCATGCTGCTGATATTGACGACGCGGCCTTTGGCCCTTCGGATGAGGGGTGTCCTTTTCATTCATaGGACTGGCTTAAGGATCAA +
Preference number: 2 (lower is better)
Translates to: AQHAADIDDAAFGPSDEGCPFHS*DWLKDQ
Trigger: TTGATCCTTAAGCCAGTCTCATGAATGAAAAGGACA...CCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCCTGGAATGCAAATGTaGAGTATTTCCACAGCCGTG +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGPGMQM*SISTAV
Trigger: CACGGCTGTGGAAATACTTCACATTTGCATTCCAGG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp CTCCTCCCACATCTTCTTGGCGATGGCCTGAATGCTCTCAGGGCTGTAAAGGCTCCTCAGGGAAGAACATaGGGACACTCGACACATGTT +
Preference number: 2 (lower is better)
Translates to: LLPHLLGDGLNALRAVKAPQGRT*GHSTHV
Trigger: AACATGTGTCGAGTGTCCTCATGTTCTTCCCTGAGG...AGCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp CTTGCGCACGACCTCAGGCAGCTCCTCCCACATCTTCTTGGCGATGGCCTGAATAAGGTGGATTCTAGCTaGCATGCACAAGAGGTATCT +
Preference number: 2 (lower is better)
Translates to: LAHDLRQLLPHLLGDGLNKVDSS*HAQEVS
Trigger: AGATACCTCTTGTGCATGTCAGCTAGAATCCACCTT...ATTCAGGCCATCGCCAAGAAGATGTGGGAGGAGCTGCCTGAGGTCGTGCGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR GCA 90 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCCTGCCATGGCACCACTaGTCGTGCCAAGCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: LSNGRPELLNLTWPLPNILPWHH*SCQACP
Trigger: GGGGCAGGCTTGGCACGAGCAGTGGTGCCATGGCAG...GATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp AAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTGGCCCTTCAAATGCCCTCTCCGTGCTCCCTCTaGAGGTCTCTGGAGTCTCTG +
Preference number: 2 (lower is better)
Translates to: KHVSCFNAVFHLVALQMPSPCSL*RSLESL
Trigger: CAGAGACTCCAGAGACCTGCAGAGGGAGCACGGAGA...GGGCATTTGAAGGGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGAAGATTCTCGGGCAAATaGATCCAAAACAGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: TSRPLGDSTDTADTRATRRFSGK*IQNSPG
Trigger: TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCT...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp GAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGACCCACCCCAGGAACCCTGCCACAGAGGAGTCTaGATTTTAAGTCCTTGTGCA +
Preference number: 2 (lower is better)
Translates to: EESNATLLSSLTDPPQEPCHRGV*ILSPCA
Trigger: TGCACAAGGACTTAAAATCCAGACTCCTCTGTGGCA...GGGTTCCTGGGGTGGGTCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp GAGCTAGCAAGCAAGATGGGGAAGAACCCTTCTTGGTGTGATCTTTCCTCCCTCGGGGGTTCACCATGTTaGCCACACTGGTCTCGAACT +
Preference number: 2 (lower is better)
Translates to: ELASKMGKNPSWCDLSSLGGSPC*PHWSRT
Trigger: AGTTCGAGACCAGTGTGGCCAACATGGTGAACCCCC...GAGGGAGGAAAGATCACACCAAGAAGGGTTCTTCCCCATCTTGCTTGCTAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR GCA 90 bp TCCCACAGAGGACTCCACCAAGAAAGAACTAATGCATCTTCAGGTCTAGGGTGTACGATCTCAGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: SHRGLHQERTNASSGLGCTISAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATCGT...ACACCCTAGACCTGAAGATGCATTAGTTCTTTCTTGGTGGAGTCCTCTGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR GCA 90 bp ACGGCTTCAGGCTCCCGAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGATCTTCCTTCTTGGGGTaGTTCTGTGGAGTCTACAAA +
Preference number: 2 (lower is better)
Translates to: TASGSRGEQRYPPIFTDRSSFLG*FCGVYK
Trigger: TTTGTAGACTCCACAGAAGCACCCCAAGAAGGAAGA...TCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTCGGGAGCCTGAAGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAGTATTTCCACAGCCGTaGCAGGAACACATAACTGGC +
Preference number: 2 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPVFPQP*QEHITG
Trigger: GCCAGTTATGTGTTCCTGCCACGGCTGTGGAAATAC...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCAGATTCTCGGGCAAATaGATCCAAAACAGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGRFSGK*IQNSPG
Trigger: TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCT...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGATCACTGGCTGCTGGCTaGCCAGTCACACAGCACCAT +
Preference number: 2 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRSLAAG*PVTQHH
Trigger: ATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGA...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGAGTCACTTTCCTTCTTTaGGCCTCAGTTATGTCATCT +
Preference number: 2 (lower is better)
Translates to: TSRPLGDSTDTADTRATRVTFLL*ASVMSS
Trigger: AGATGACATAACTGAGGCCCAAAGAAGGAAAGTGAC...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 90 bp CTGCTTGCTCATGTCGGCTCCTATATCAACACAGTTTGCACAGGTTaGCAGAGCCAGGCCCTGTTCGAAATACAGGCAGTGAACAGACCT +
Preference number: 2 (lower is better)
Translates to: LLAHVGSYINTVCTG*QSQALFEIQAVNRP
Trigger: AGGTCTGTTCACTGCCTGTATTTCGAACAGGGCCTGGCTCTGCAAACCTGTGCAAACTGTGTTGATATAGGAGCCGACATGAGCAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 90 bp CTTGCTTTAATGCAGTCTTCCACCTGGTGGCCCTTCAAATGCCCCTaGGCGTGGAGCTCACATGATCTGAACCTCAGAAAGGTGGATTCT +
Preference number: 2 (lower is better)
Translates to: LALMQSSTWWPFKCP*AWSSHDLNLRKVDS
Trigger: AGAATCCACCTTTCTGAGGTTCAGATCATGTGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCATTAAAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGATCCAGCCTAGGGGACTaGGCAAGACTGTGTCTGGAA +
Preference number: 2 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRSSLGD*ARLCLE
Trigger: TTCCAGACACAGTCTTGCTCAGTCCCCTAGGCTGGA...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGTGTAAGCACCACGTaGGGCAAGCAGGGACCCCAA +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSCVSTT*GKQGPQ
Trigger: TTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCCAAGTCACTCACTATaGAAAGAAGTCATTCCCTCT +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGPSHSL*KEVIPS
Trigger: AGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCAGGTAAAGGAAGGGGCTaGGGGTATAGAAGTCAGATG +
Preference number: 2 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGAGKGRG*GYRSQM
Trigger: CATCTGACTTCTATACCCGCAGCCCCTTCCTTTACC...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGATCCCCCTCTGGGCTCTaGAGGGTTTCGGCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRSPSGL*RVSALP
Trigger: AGGCAGGGCCGAAACCCTCCAGAGCCCAGAGGGGGA...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp TCCCACAGAGGACTCCACCAAGAAAGAACTAATGCATCTTCAGGTCTAGGGTGTGTGATGTTCACAGGATaGGCAGGAGGAGGAGCTAGC +
Preference number: 2 (lower is better)
Translates to: SHRGLHQERTNASSGLGCVMFTG*AGGGAS
Trigger: GCTAGCTCCTCCTCCTGCCCATCCTGTGAACATCAC...ACACCCTAGACCTGAAGATGCATTAGTTCTTTCTTGGTGGAGTCCTCTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp ATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCGCATATATGTTCAGGTaGTTTAGCACCTCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: IQDLSGAPTQHHDKVPAVAYMFR*FSTSGK
Trigger: CTTCCCTGAGGTGCTAAACCACCTGAACATATATGC...GACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp CAGGTACCAGGAAAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTGGCCAAATGCCCCTTGGCGTaGAGCTCACATGATCTGAAC +
Preference number: 2 (lower is better)
Translates to: QVPGKHVSCFNAVFHLVAKCPLA*SSHDLN
Trigger: GTTCAGATCATGTGAGCTCCACGCCAAGGGGCATTT...GGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTTTCCTGGTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 90 bp ACCCTGCTCCTGACAACCACGCCAATAGGGACAGAAACTACCAATTaGCCCCCAGTTATTCAGAGAAATCTTTCCAACCACCCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: TLLLTTTPIGTETTN*PPVIQRNLSNHPQP
Trigger: AGGCTGAGGGTGGTTGGAAAGATTTCTCTGAATAACTGGGGGCAAATTGGTAGTTTCTGTCCCTATTGGCGTGGTTGTCAGGAGCAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGATCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 2 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRSTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATTCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 2 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHSTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
3UTR-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCTGTCCTTTTCATTCATaGGACTGGCTTAAGGATCAA +
Preference number: 2 (lower is better)
Translates to: KASYGYVTAAATKRPPLGCPFHS*DWLKDQ
Trigger: TTGATCCTTAAGCCAGTCTCATGAATGAAAAGGACA...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGATGTGTGCTGCCCAGATaGGGACACAGAGTTAGTCAG +
Preference number: 2 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRCVLPR*GHRVSQ
Trigger: CTGACTAACTCTGTGTCCTCATCTGGGCAGCACACA...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp GGCTCCATCTATTTTCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACAGGCGGAGGTTGCAGTaGGCGGAGATGGTGCCATTG +
Preference number: 2 (lower is better)
Translates to: GSIYFPLINFSTDTNSPNRRRLQ*AEMVPL
Trigger: CAATGGCACCATCTCCGCTCACTGCAACCTCCGCCT...GTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGAAAATAGATGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCACACACAAGTCTATCCTaGGTCCTAAAAGAGGATGGA +
Preference number: 2 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPHTSLS*VLKEDG
Trigger: TCCATCCTCTTTTAGGACTCAGGATAGACTTGTGTG...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp CACACACCAGAGAGGCCTCATATACTGTGGGGTTGTTTCATCTCCCCCAGAGCACACACAAGTCTATCCTaGGTCCTAAAAGAGGATGGA +
Preference number: 2 (lower is better)
Translates to: HTPERPHILWGCFISPRAHTSLS*VLKEDG
Trigger: TCCATCCTCTTTTAGGACTCAGGATAGACTTGTGTG...TGCTCTGGGGGAGATGAAACAACCCCACAGTATATGAGGCCTCTCTGGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTGCACTTGGTGTGTGCTaGCCAGATGAGGACACAGAG +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSALGVC*PDEDTE
Trigger: CTCTGTGTCCTCATCTGGGCAGCACACACCAAGTGC...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAACTGCCATGGCACCACTaGTCGTGCCAAGCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQLPWHH*SCQACP
Trigger: GGGGCAGGCTTGGCACGAGCAGTGGTGCCATGGCAG...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAGGGGAGATGCCACAGTaGCCTGCCATGGCACCACTG +
Preference number: 2 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRGEMPQ*PAMAPL
Trigger: CAGTGGTGCCATGGCAGGGCACTGTGGCATCTCCCC...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp TCCCACAGAGGACTCCACCAAGAAAGAACTAATGCATCTTCAGGTCTAGGGTGTCGCCCACTCAGTGGGTaGTTCAAAGCTTCATCAAGC +
Preference number: 2 (lower is better)
Translates to: SHRGLHQERTNASSGLGCRPLSG*FKASSS
Trigger: GCTTGATGAAGCTTTGAAGCACCCACTGAGTGGGCG...ACACCCTAGACCTGAAGATGCATTAGTTCTTTCTTGGTGGAGTCCTCTGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCACCAGCTCTGGGCTaGAGGTTAGATCTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSSPALG*RLDLAG
Trigger: TCCAGCCAGATCTAACCTCCAGCCCAGAGCTGGTGA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGATCACCATGTTTGCCCTaGGATTTAGAGGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGSPCLP*DLEASA
Trigger: GGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGA...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCTGTCCTTTTCATTCATaGGACTGGCTTAAGGATCAA +
Preference number: 2 (lower is better)
Translates to: ALGSRRDGSFQTETQEVICPFHS*DWLKDQ
Trigger: TTGATCCTTAAGCCAGTCTCATGAATGAAAAGGACA...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTCCAGGTAAGGCCATGTaGCTAAGTTCTGGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSPGKAM*LSSGQE
Trigger: CTCTTGGCCAGAACTTAGTCACATGGCCTTACCTGG...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp CAGGTACCAGGAAAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTGGCCCCTATTCTTAACTTCTaGCCCTTCCAAGGTTGGATC +
Preference number: 2 (lower is better)
Translates to: QVPGKHVSCFNAVFHLVAPILNF*PFQGWI
Trigger: GATCCAACCTTGGAAGGGTCAGAAGTTAAGAATAGG...GGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTTTCCTGGTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTGGCGTGGAGCTCACATaGTCTGAACCTCAGAAAGGT +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSGVELT*SEPQKG
Trigger: ACCTTTCTGAGGTTCAGATCATGTGAGCTCCACGCC...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR GCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCACCAAGTCACTCACTATaGAAAGAAGTCATTCCCTCT +
Preference number: 2 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPPSHSL*KEVIPS
Trigger: AGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGG...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAGCATCCTCTTTAAGCTaGAAATGCTTCATTTACAAA +
Preference number: 2 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVASSLS*KCFIYK
Trigger: TTTGTAAATGAAGCATTTGCAGCTTAAAGAGGATGC...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATGGCACCACTGCTCGTaGCAAGCCTGCCCCATCGAC +
Preference number: 2 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQWHHCS*QACPID
Trigger: GTCGATGGGGCAGGCTTGGCACGAGCAGTGGTGCCA...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAGATGCCACAGTGCCCTaGCATGGCACCACTGCTCGT +
Preference number: 2 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRDATVP*HGTTAR
Trigger: ACGAGCAGTGGTGCCATGGCAGGGCACTGTGGCATC...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAGGGGAGATGCCACAGTaGCCTGCCATGGCACCACTG +
Preference number: 2 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQGEMPQ*PAMAPL
Trigger: CAGTGGTGCCATGGCAGGGCACTGTGGCATCTCCCC...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAGCCACGCTGAAGCCCTaGAGAACAGGGGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRATLKP*RTGVCV
Trigger: CACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGC...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGCTTCCAGGGCTGTTaGGAGCCACAGTGTTATGTG +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSCFQGC*EPQCYV
Trigger: CACATAACACTGTGGCTCGCAACAGCCCTGGAAGCA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCAAGATAACCCCACCCTaGCTATCCTGCCTGGGTTGC +
Preference number: 2 (lower is better)
Translates to: LSNGRPELLNLTWPLPNIKITPP*LSCLGC
Trigger: GCAACCCAGGCAGGATAGGCAGGGTGGGGTTATCTT...GATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTCAAGAGTTGACTATATaGGTTCCTCCCTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSQELTI*VPPSPP
Trigger: GGGAGGGGAGGGAGGAACCCATATAGTCAACTCTTG...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
3UTR-3UTR TCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGTGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCATGTCCTTTTCATTCATaGGACTGGCTTAAGGATCAA +
Preference number: 2 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPCPFHS*DWLKDQ
Trigger: TTGATCCTTAAGCCAGTCTCATGAATGAAAAGGACA...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGACCTGGAATGCAAATGTaGAGTATTTCCACAGCCGTG +
Preference number: 2 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRPGMQM*SISTAV
Trigger: CACGGCTGTGGAAATACTTCACATTTGCATTCCAGG...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAGTATTTCCACAGCCGTaGCAGGAACACATAACTGGC +
Preference number: 2 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGVFPQP*QEHITG
Trigger: GCCAGTTATGTGTTCCTGCCACGGCTGTGGAAATAC...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CAA 90 bp ATAACCACAGCTGAAACCTGTTCAGACAGCGAGGAGATGGAAATCTaGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTT +
Preference number: 2 (lower is better)
Translates to: ITTAETCSDSEEMEI*SNGRPELLNLTWPL
Trigger: AAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAAGATTTCCATCTCCTCGCTGTCTGAACAGGTTTCAGCTGTGGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATTCCACACCCTGTTTGTaGAGGCCCAAGTCACTCACT +
Preference number: 2 (lower is better)
Translates to: VSQKILGQMDPKQSWNANSTPCL*RPKSLT
Trigger: AGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGA...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTAGGCAGCCAATGAGCTaGTTCTGGCAGAAAGGTTTT +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSRQPMS*FWQKGF
Trigger: AAAACCTTTCTGCCAGAATCAGCTCATTGGCTGCCT...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR GCA 90 bp TCCCACAGAGGACTCCACCAAGAAAGAACTAATGCATCTTCAGGTCTAGGGTGTAGGAAGCCTTTTGAATaGAGATGCTTGGCCAATGAG +
Preference number: 2 (lower is better)
Translates to: SHRGLHQERTNASSGLGCRKPFE*RCLANE
Trigger: CTCATTGGCCAAGCATCTGCATTCAAAAGGCTTCCT...ACACCCTAGACCTGAAGATGCATTAGTTCTTTCTTGGTGGAGTCCTCTGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAGAGGCCCTTCTTCCTTaGCACTGCCTGAACCCCGTA +
Preference number: 2 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQEALLP*HCLNPV
Trigger: TACGGGGTTCAGGCAGTGCCAAGGAAGAAGGGCCTC...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp TCCCACAGAGGACTCCACCAAGAAAGAACTAATGCATCTTCAGGTCTAGGGTGTCTCATTCTCAGACAGTaGACAGAGAGCCTCTTTGTT +
Preference number: 2 (lower is better)
Translates to: SHRGLHQERTNASSGLGCLILRQ*TESLFV
Trigger: AACAAAGAGGCTCTCTGTCCACTGTCTGAGAATGAG...ACACCCTAGACCTGAAGATGCATTAGTTCTTTCTTGGTGGAGTCCTCTGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGATCCACACCCTGTTTGTaGAGGCCCAAGTCACTCACT +
Preference number: 2 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRSTPCL*RPKSLT
Trigger: AGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGA...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGATCACCATGTTTGCCCTaGGATTTAGAGGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRSPCLP*DLEASA
Trigger: GGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGA...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAAAAAGGGTTATTTCATaGATCCTCTTTAAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPKRVIS*ILFKLQ
Trigger: TTGCAGCTTAAAGAGGATGCATGAAATAACCCTTTT...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp CACACACCAGAGAGGCCTCATATACTGTGGGGTTGTTTCATCTCCCCCAGAGCAAAAAGGGTTATTTCATaGATCCTCTTTAAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: HTPERPHILWGCFISPRAKRVIS*ILFKLQ
Trigger: TTGCAGCTTAAAGAGGATGCATGAAATAACCCTTTT...TGCTCTGGGGGAGATGAAACAACCCCACAGTATATGAGGCCTCTCTGGTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR GCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGACTATGGTTATGTAACTaGAGCGGCCACCAAGCGTCC +
Preference number: 2 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRLWLCN*SGHQAS
Trigger: GGACGCTTGGTGGCCGCTGCAGTTACATAACCATAG...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCCTGTCCTTTTGTACTaGCACAGAGGAGTCTGGATT +
Preference number: 2 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVPVLLY*HRGVWI
Trigger: AATCCAGACTCCTCTGTGGCAGTACAAAAGGACAGG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCAAGAGTTGACTATATaGGTTCCTCCCTCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHQELTI*VPPSPP
Trigger: GGGAGGGGAGGGAGGAACCCATATAGTCAACTCTTG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
3UTR-3UTR CCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAATGCAGAGGTACCAGTaGGCACTTGGTGTGTGCTGC +
Preference number: 2 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQMQRYQ*ALGVCC
Trigger: GCAGCACACACCAAGTGCCCACTGGTACCTCTGCAT...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAATTAGCCCGGCATGGTaGTGGGTGCCTATAACCCCA +
Preference number: 2 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQISPAW*WVPITP
Trigger: TGGGGTTATAGGCACCCACCACCATGCCGGGCTAAT...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGGTGCGTGTGCAACTaGCTTATTGATAAACCCACT +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSWCVCN*LIDKPT
Trigger: AGTGGGTTTATCAATAAGCCAGTTGCACACGCACCA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 90 bp AAGAGGTATCTAAATGTCCTTCCTCTTGGGACTTGGTTAACCCTGTaGCTATCATTCAGCTCTTCTCAGACCCCTATACAAGACCTCTCT +
Preference number: 2 (lower is better)
Translates to: KRYLNVLPLGTWLTL*LSFSSSQTPIQDLS
Trigger: AGAGAGGTCTTGTATAGGGGTCTGAGAAGAGCTGAATGATAGCAACAGGGTTAACCAAGTCCCAAGAGGAAGGACATTTAGATACCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
3UTR-3UTR TCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTATGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
3UTR-3UTR TCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGATGTCCTTTTCATTCATaGGACTGGCTTAAGGATCAA +
Preference number: 2 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRCPFHS*DWLKDQ
Trigger: TTGATCCTTAAGCCAGTCTCATGAATGAAAAGGACA...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp GGCTCCATCTATTTTCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACCCTGGAATGCAAATGTaGAGTATTTCCACAGCCGTG +
Preference number: 2 (lower is better)
Translates to: GSIYFPLINFSTDTNSPNPGMQM*SISTAV
Trigger: CACGGCTGTGGAAATACTTCACATTTGCATTCCAGG...GTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGAAAATAGATGGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAACTGAAACCCAAGAAGTaGTCATGCAGACCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQLKPKK*SCRPCL
Trigger: GAGGCAGGGTCTGCATGATCACTTCTTGGGTTTCAG...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTCCAAGTCACTCACTATaGAAAGAAGTCATTCCCTCT +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSPSHSL*KEVIPS
Trigger: AGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGG...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
3UTR-3UTR CCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAGTATTTCCACAGCCGTaGCAGGAACACATAACTGGC +
Preference number: 2 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRVFPQP*QEHITG
Trigger: GCCAGTTATGTGTTCCTGCCACGGCTGTGGAAATAC...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAAGTCACACAGCACCATaGACATGCAGAGGTACCAGT +
Preference number: 2 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRSHTAP*TCRGTS
Trigger: ACTGGTACCTCTGCATGTCCATGGTGCTGTGTGACT...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTACAAAAGCATCCTATaGTTATGTAACTGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSYKSIL*LCNCSG
Trigger: GCCGCTGCAGTTACATAACCATAGGATGCTTTTGTA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CAA 90 bp TATAATACTGAGGCAGCCAATGAGCTGATTCTGGCAGAAAGGTTTTaGTCTCTAGCATATATGTTCAGGTGGTTTAGCACCTCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: YNTEAANELILAERF*SLAYMFRWFSTSGK
Trigger: CTTCCCTGAGGTGCTAAACCACCTGAACATATATGCTAGAGACAAAAACCTTTCTGCCAGAATCAGCTCATTGGCTGCCTCAGTATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR TCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGATGTCCTTTTCATTCATaGGACTGGCTTAAGGATCAA +
Preference number: 2 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGCPFHS*DWLKDQ
Trigger: TTGATCCTTAAGCCAGTCTCATGAATGAAAAGGACA...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp TCCCACAGAGGACTCCACCAAGAAAGAACTAATGCATCTTCAGGTCTAGGGTGTTTTATTTTTCTCTACTaGTTTTACCACCCGAGCAGA +
Preference number: 2 (lower is better)
Translates to: SHRGLHQERTNASSGLGCFIFLY*FYHPSR
Trigger: TCTGCTCGGGTGGTAAAAGCAGTAGAGAAAAATAAA...ACACCCTAGACCTGAAGATGCATTAGTTCTTTCTTGGTGGAGTCCTCTGTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAATAACCCCAGCTACTTaGAAGGCTGAGGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQITPAT*KAEAGE
Trigger: TTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGGTTAT...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCAGACCCTGCCTCAAGTaGCATCACTTCTTAATTGAA +
Preference number: 2 (lower is better)
Translates to: LSNGRPELLNLTWPLPNIRPCLK*HHFLIE
Trigger: TTCAATTAAGAAGTGATGCCACTTGAGGCAGGGTCT...GATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGACACACAAGTCTATCCTaGGTCCTAAAAGAGGATGGA +
Preference number: 2 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRHTSLS*VLKEDG
Trigger: TCCATCCTCTTTTAGGACTCAGGATAGACTTGTGTG...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCTTTCGGCTCAGTCTTTaGATAAACGTTTCTGAACCA +
Preference number: 2 (lower is better)
Translates to: LSNGRPELLNLTWPLPNIFRLSL*INVSEP
Trigger: TGGTTCAGAAACGTTTATCCAAAGACTGAGCCGAAA...GATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR TCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGATGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR TCA 90 bp ATTTTAGGCCGGGTACATATTGTCTCAGAATACTCACTACATTTTCCAGCCTTCTTCACTAGACAGAAATaGGGGTTCACTAGGAAAACC +
Preference number: 2 (lower is better)
Translates to: ILGRVHIVSEYSLHFPAFFTRQK*GFTRKT
Trigger: GGTTTTCCTAGTGAACCCTCATTTCTGTCTAGTGAA...GAAGGCTGGAAAATGTAGTGAGTATTCTGAGACAATATGTACCCGGCCTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR GCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAAAAAGGGTTATTTCATaGATCCTCTTTAAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGKRVIS*ILFKLQ
Trigger: TTGCAGCTTAAAGAGGATGCATGAAATAACCCTTTT...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAACTGTTTCTGAAGGGTaGTGCTTGCTTCTTTGTTCC +
Preference number: 2 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQTVSEG*CLLLCS
Trigger: GGAACAAAGAAGCAAGCAGCACCCTTCAGAAACAGT...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAAGATTCTCGGGCAAATaGATCCAAAACAGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQRFSGK*IQNSPG
Trigger: TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCT...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAACCAAGTCACTCACTATaGAAAGAAGTCATTCCCTCT +
Preference number: 2 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQPSHSL*KEVIPS
Trigger: AGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGG...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR GCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATAAAAGGGTTATTTCATaGATCCTCTTTAAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: VSQKILGQMDPKQSWNANKRVIS*ILFKLQ
Trigger: TTGCAGCTTAAAGAGGATGCATGAAATAACCCTTTT...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR TCA 72 bp GCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTaGTTCGAAGGCGGGCACTGGGGACCCTGCCCCGGG +
Preference number: 3 (lower is better)
Translates to: AGPPRERRKRGV*FEGGHWGPCPG
Trigger: CCCGGGGCAGGGTCCCCAGTGCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 72 bp GAGACCTCCGACTGCCACTCCAGACGCAGGGCAGCGTaGCTCCCCCAGCCGGGCATCTGCTCCCTCAGCCCC +
Preference number: 3 (lower is better)
Translates to: ETSDCHSRRRAA*LPQPGICSLSP
Trigger: GGGGCTGAGGGAGCAGATGCCCGGCTGGGGGAGGCACGCTGCCCTGCGTCTGGAGTGGCAGTCGGAGGTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 72 bp CACGTGGCCAGATGGCCCCGCAGAGCACTCACCGGCTaGGAGTGGCCGGAGGGTGGTGGCCGGTACAGCAGT +
Preference number: 3 (lower is better)
Translates to: HVARWPRRALTG*EWPEGGGRYSS
Trigger: ACTGCTGTACCGGCCACCACCCTCCGGCCACTCTCAGCCGGTGAGTGCTCTGCGGGGCCATCTGGCCACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp GTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGACTaGCCCGCAGGCCACACCACCTCCCTGGACCCAGGG +
Preference number: 3 (lower is better)
Translates to: VPLRVYLSSGQD*PAGHTTSLDPG
Trigger: CCCTGGGTCCAGGGAGGTGGTGTGGCCTGCGGGGCAGTCTTGGCCTGAGGACAGGTAGACCCTGAGGGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp AGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTGCCTaGCTGCCGCTCCTTCGCCACGTGCAAGGCGAGGTT +
Preference number: 3 (lower is better)
Translates to: SWLSCLPACLPA*LPLLRHVQGEV
Trigger: AACCTCGCCTTGCACGTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp AGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTaGCTGCCTGCCGCTCCTTCGCCACGTGCAAGGCGA +
Preference number: 3 (lower is better)
Translates to: RKLAVLLACLPA*LPAAPSPRARR
Trigger: TCGCCTTGCACGTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp GGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTaGCTGCCTGCCTGCCTGCCGCTCCTTCGCCACGTG +
Preference number: 3 (lower is better)
Translates to: GLGGSWLSCLPA*LPACLPLLRHV
Trigger: CACGTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp CTGCGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTaGCTGCCTGCCTGCCTGCCTGCCGCTCCTTCGCCA +
Preference number: 3 (lower is better)
Translates to: LRTRRKLAVLLA*LPACLPAAPSP
Trigger: TGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCAG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp CCGCGAAACTGCGGACTAGGAGGAAGCTGGCTGTCCTaGTTGCCTGCCTGCCTGCCTGCCTGCCTGCCGCTC +
Preference number: 3 (lower is better)
Translates to: PRNCGLGGSWLS*LPACLPACLPL
Trigger: GAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCAGTTTCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 72 bp CAGCCGGGCATCTGCTCCCTCAGCCCCTGGCCTCAGTaGTGTACCCGCTTCTGGCTGGGGCCACATGGATCC +
Preference number: 3 (lower is better)
Translates to: QPGICSLSPWPQ*CTRFWLGPHGS
Trigger: GGATCCATGTGGCCCCAGCCAGAAGCGGGTACATCACTGAGGCCAGGGGCTGAGGGAGCAGATGCCCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp AGTGCCCTGCCATGGCACCACTGCTCGTGCCAAGCCTaGCCCATCGACACCGGCCCCACCCAAGGCAAAACC +
Preference number: 3 (lower is better)
Translates to: SALPWHHCSCQA*PIDTGPTQGKT
Trigger: GGTTTTGCCTTGGGTGGGGCCGGTGTCGATGGGGCAGGCTTGGCACGAGCAGTGGTGCCATGGCAGGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 72 bp GCCGGAGGGTGGTGGCCGGTACAGCAGTGTACCCAGTaGAGTCCACCACGCCCGCACTTGTCTGGCAGCAGA +
Preference number: 3 (lower is better)
Translates to: AGGWWPVQQCTQ*SPPRPHLSGSR
Trigger: TCTGCTGCCAGACAAGTGCGGGCGTGGTGGACTGCACTGGGTACACTGCTGTACCGGCCACCACCCTCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp GCGTGGCCCGCTAAGTCTCTGCAGAGGCACCAGGGATaGCTTCGGACACAGCAGCCAGGCCGGAGGCTCGAT +
Preference number: 3 (lower is better)
Translates to: AWPAKSLQRHQG*LRTQQPGRRLD
Trigger: ATCGAGCCTCCGGCCTGGCTGCTGTGTCCGAAGGCATCCCTGGTGCCTCTGCAGAGACTTAGCGGGCCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp CCCCGGGCCGAAAGCCCCCTGGAGGACAGTGGTGTTTaGCTTCGGTCCCAACATACAGGCCCTGGGCAGTCG +
Preference number: 3 (lower is better)
Translates to: PRAESPLEDSGV*LRSQHTGPGQS
Trigger: CGACTGCCCAGGGCCTGTATGTTGGGACCGAAGCCAAACACCACTGTCCTCCAGGGGGCTTTCGGCCCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CCA 72 bp GACCCTGCCCCGGGCCGAAAGCCCCCTGGAGGACAGTaGTGTTTGGCTTCGGTCCCAACATACAGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: DPAPGRKPPGGQ*CLASVPTYRPW
Trigger: CCAGGGCCTGTATGTTGGGACCGAAGCCAAACACCACTGTCCTCCAGGGGGCTTTCGGCCCGGGGCAGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CCA 72 bp GGCGAGGTTCTGACTGCGCTGAGTCCAGCCCAGCTCTaGGCCCCAGTGTGGAGACTGAGGCAGCCTGAGGGT +
Preference number: 3 (lower is better)
Translates to: GEVLTALSPAQL*APVWRLRQPEG
Trigger: ACCCTCAGGCTGCCTCAGTCTCCACACTGGGGCCCAGAGCTGGGCTGGACTCAGCGCAGTCAGAACCTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp CCGCAGAGCACTCACCGGCTGAGAGTGGCCGGAGGGTaGTGGCCGGTACAGCAGTGTACCCAGTGCAGTCCA +
Preference number: 3 (lower is better)
Translates to: PQSTHRLRVAGG*WPVQQCTQCSP
Trigger: TGGACTGCACTGGGTACACTGCTGTACCGGCCACCACCCTCCGGCCACTCTCAGCCGGTGAGTGCTCTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 72 bp GCAGGCAGTCCGAGAAAGCCTCTACCCCGAACTTGGTaGTGCAGTACGGGGAGCGGGCCGGGTTGGCCATGC +
Preference number: 3 (lower is better)
Translates to: AGSPRKPLPRTW*CSTGSGPGWPC
Trigger: GCATGGCCAACCCGGCCCGCTCCCCGTACTGCATCACCAAGTTCGGGGTAGAGGCTTTCTCGGACTGCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp CAGCTTGTGACAGGCGGGGCCAGGCTGGCTGTCACCTaGTCACACAGCCTCTTGGCCCCGGGTGGAATGCTA +
Preference number: 3 (lower is better)
Translates to: QLVTGGARLAVT*SHSLLAPGGML
Trigger: TAGCATTCCACCCGGGGCCAAGAGGCTGTGTGAGCAGGTGACAGCCAGCCTGGCCCCGCCTGTCACAAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp TGGTGGCTGGGTAGCAGGACCTGCACTTGGCCCCTGTaGCTGGTTGCTGTCTGGCCAACCCAACCTGGGGCT +
Preference number: 3 (lower is better)
Translates to: WWLGSRTCTWPL*LVAVWPTQPGA
Trigger: AGCCCCAGGTTGGGTTGGCCAGACAGCAACCAGGCACAGGGGCCAAGTGCAGGTCCTGCTACCCAGCCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp CCCTTGCTCAACAGCTGCCCACCCCGTGCCTCCGAATaGGCCACTCGCAAGTCACCCTTCCTTAGTGCCCGC +
Preference number: 3 (lower is better)
Translates to: PLLNSCPPRASE*ATRKSPFLSAR
Trigger: GCGGGCACTAAGGAAGGGTGACTTGCGAGTGGCGCATTCGGAGGCACGGGGTGGGCAGCTGTTGAGCAAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp CAGCCCTGGTCCCTTGCTCAACAGCTGCCCACCCCGTaGCTCCGAATGCGCCACTCGCAAGTCACCCTTCCT +
Preference number: 3 (lower is better)
Translates to: QPWSLAQQLPTP*LRMRHSQVTLP
Trigger: AGGAAGGGTGACTTGCGAGTGGCGCATTCGGAGGCACGGGGTGGGCAGCTGTTGAGCAAGGGACCAGGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp CAGAGCACTCACCGGCTGAGAGTGGCCGGAGGGTGGTaGCCGGTACAGCAGTGTACCCAGTGCAGTCCACCA +
Preference number: 3 (lower is better)
Translates to: QSTHRLRVAGGW*PVQQCTQCSPP
Trigger: TGGTGGACTGCACTGGGTACACTGCTGTACCGGCCACCACCCTCCGGCCACTCTCAGCCGGTGAGTGCTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp TCCAACCACCCTCAGCCTGCTGGCTGCAGACTCTGGTaGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGC +
Preference number: 3 (lower is better)
Translates to: SNHPQPAGCRLW*PVPLRVYLSSG
Trigger: GCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCAGCCAGCAGGCTGAGGGTGGTTGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CAA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCGGAGGACAGTGGTGTTaGGCTTCGGTCCCAACATAC +
Preference number: 3 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGGGQWC*ASVPTY
Trigger: GTATGTTGGGACCGAAGCCAAACACCACTGTCCTCC...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 72 bp CCCAAATCCACTGCTAGGGGAGATGCCACAGTGCCCTaGCATGGCACCACTGCTCGTGCCAAGCCTGCCCCA +
Preference number: 3 (lower is better)
Translates to: PKSTARGDATVP*HGTTARAKPAP
Trigger: TGGGGCAGGCTTGGCACGAGCAGTGGTGCCATGGCAGGGCACTGTGGCATCTCCCCTAGCAGTGGATTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 72 bp GGGACCCCAAATCCACTGCTAGGGGAGATGCCACAGTaGCCTGCCATGGCACCACTGCTCGTGCCAAGCCTG +
Preference number: 3 (lower is better)
Translates to: GTPNPLLGEMPQ*PAMAPLLVPSL
Trigger: CAGGCTTGGCACGAGCAGTGGTGCCATGGCAGGGCACTGTGGCATCTCCCCTAGCAGTGGATTTGGGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CCA 72 bp GTAATGCACCCCCTGTCACTGGAGGGCTTCAAGCCCTaGCTAGCAGGCTCCTCATCCGGGAGCCTGGGAGTC +
Preference number: 3 (lower is better)
Translates to: VMHPLSLEGFKP*LAGSSSGSLGV
Trigger: GACTCCCAGGCTCCCGGATGAGGAGCCTGCTAGCCAGGGCTTGAAGCCCTCCAGTGACAGGGGGTGCATTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp ACACTGCAGACACACGTGCGACGAGACAGGGAAGCCTaGGCCTCCCTTTCCAGGCTGCTCCGCGAAACTGCG +
Preference number: 3 (lower is better)
Translates to: TLQTHVRRDREA*ASLSRLLRETA
Trigger: CGCAGTTTCGCGGAGCAGCCTGGAAAGGGAGGCCCAGGCTTCCCTGTCTCGTCGCACGTGTGTCTGCAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp TCAGCCCCTGGCCTCAGTGATGTACCCGCTTCTGGCTaGGGCCACATGGATCCTCCCAGCCAGCTCACTGGA +
Preference number: 3 (lower is better)
Translates to: SAPGLSDVPASG*GHMDPPSQLTG
Trigger: TCCAGTGAGCTGGCTGGGAGGATCCATGTGGCCCCAGCCAGAAGCGGGTACATCACTGAGGCCAGGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 72 bp GGACAACGGCCCGGGAGGCAGCTGAATTGCCCATTGTaGGGCCCTTCTTCCTTGGCACTGCCTGAACCCCGT +
Preference number: 3 (lower is better)
Translates to: GQRPGRQLNCPL*GPSSLALPEPR
Trigger: ACGGGGTTCAGGCAGTGCCAAGGAAGAAGGGCCTCACAATGGGCAATTCAGCTGCCTCCCGGGCCGTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR TCA 72 bp CTAGGTGCGCCGACCTTCCCAAACAAGACGCAGGCATaGGATGCACGGGACAGATGGGCCTGGAGCTCAGGC +
Preference number: 3 (lower is better)
Translates to: LGAPTFPNKTQA*DARDRWAWSSG
Trigger: GCCTGAGCTCCAGGCCCATCTGTCCCGTGCATCTCATGCCTGCGTCTTGTTTGGGAAGGTCGGCGCACCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp GGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATaGAGAGGTACCAGTGGGCACTTGGTGTGTGCTGCC +
Preference number: 3 (lower is better)
Translates to: GCWLASHTAPWT*RGTSGHLVCAA
Trigger: GGCAGCACACACCAAGTGCCCACTGGTACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CCA 72 bp GGCCTTGACAGAGCCGACTTCCCGCTGGAAGGATACTaGGGGCTCCTCCAGCACATTCTCTCACAGGGGGCA +
Preference number: 3 (lower is better)
Translates to: GLDRADFPLEGY*GLLQHILSQGA
Trigger: TGCCCCCTGTGAGAGAATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp CCCATCACAGCCCCGGAAGTCCCATTGTACCTCCATTaGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: PITAPEVPLYLH*NESPSVPPACR
Trigger: CCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTACAATGGGACTTCCGGGGCTGTGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp CGGCACAGGGCTGCCCCTCAGAATGTGACACTAATATaGCACTGGGACCATCGGCAGCTCCTCCGCCCTTCC +
Preference number: 3 (lower is better)
Translates to: RHRAAPQNVTLI*HWDHRQLLRPS
Trigger: GGAAGGGCGGAGGAGCTGCCGATGGTCCCAGTGCCATATTAGTGTCACATTCTGAGGGGCAGCCCTGTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp AGGAAGCCTCCCCAGTGGCCCTTTGAAAAGGCACTGTaGCGTGGCCCGCTAAGTCTCTGCAGAGGCACCAGG +
Preference number: 3 (lower is better)
Translates to: RKPPQWPFEKAL*RGPLSLCRGTR
Trigger: CCTGGTGCCTCTGCAGAGACTTAGCGGGCCACGCCACAGTGCCTTTTCAAAGGGCCACTGGGGAGGCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp CGAGGCGAGGCGGGAATGAAGGCCACGCTGAAGCCCTaGAGAACAGGGGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: RGEAGMKATLKP*RTGVCVCVCVC
Trigger: ACACACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATTCCCGCCTCGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 72 bp CCTTGCCCAGCCTCCAACCATCAGGGGATGGGTTTGTaGTGGCTGGAGTCACCAGACCATAGGTCCGCACAG +
Preference number: 3 (lower is better)
Translates to: PCPASNHQGMGL*WLESPDHRSAQ
Trigger: CTGTGCGGACCTATGGTCTGGTGACTCCAGCCAGCACAAACCCATCCCCTGATGGTTGGAGGCTGGGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp CTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTaGAGGGAAGAGTCTGATGCCCCTCGTGACATCACC +
Preference number: 3 (lower is better)
Translates to: LHWNESPSVPPA*REESDAPRDIT
Trigger: GGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp TGCCCAGCCTCCAACCATCAGGGGATGGGTTTGTGCTaGCTGGAGTCACCAGACCATAGGTCCGCACAGGCA +
Preference number: 3 (lower is better)
Translates to: CPASNHQGMGLC*LESPDHRSAQA
Trigger: TGCCTGTGCGGACCTATGGTCTGGTGACTCCAGCCAGCACAAACCCATCCCCTGATGGTTGGAGGCTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp GCCTCAGTGATGTACCCGCTTCTGGCTGGGGCCACATaGATCCTCCCAGCCAGCTCACTGGATGGTTACCCT +
Preference number: 3 (lower is better)
Translates to: ASVMYPLLAGAT*ILPASSLDGYP
Trigger: AGGGTAACCATCCAGTGAGCTGGCTGGGAGGATCCATGTGGCCCCAGCCAGAAGCGGGTACATCACTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp CACCGCTTCCGTTCCTGGACTGTCGTCTTCACCGCCTaGTTTTCCATGGAAAGGAAGCCTCCCCAGTGGCCC +
Preference number: 3 (lower is better)
Translates to: HRFRSWTVVFTA*FSMERKPPQWP
Trigger: GGGCCACTGGGGAGGCTTCCTTTCCATGGAAAACCAGGCGGTGAAGACGACAGTCCAGGAACGGAAGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CAA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCAGGCAGGAGAACCGCTaGAACCAGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: KASYGYVTAAATKRPPLGRQENR*NQGGGG
Trigger: ACCTCCGCCTCCCTGGTTCAAGCGGTTCTCCTGCCT...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CAA 90 bp GCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCGCTGAGTCCAGCCCATCATATACTGTGGGGTaGTTTCATCTCCCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: AAPSPRARRGSDCAESSPSYTVG*FHLPQS
Trigger: GCTCTGGGGGAGATGAAACAACCCCACAGTATATGA...TGGGCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 72 bp TTTGAAGACAGCGGGGACAACGGCCCGGGAGGCAGCTaGATTGCCCATTGTGAGGCCCTTCTTCCTTGGCAC +
Preference number: 3 (lower is better)
Translates to: FEDSGDNGPGGS*IAHCEALLPWH
Trigger: GTGCCAAGGAAGAAGGGCCTCACAATGGGCAATTCAGCTGCCTCCCGGGCCGTTGTCCCCGCTGTCTTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR TCA 72 bp TGCCAGCAGACAAGCAGTGAGGGTCTAGGTGCCTGGTaGCCCCAACTGGCTTTGCTTCCAGGGCTGTTGCGA +
Preference number: 3 (lower is better)
Translates to: CQQTSSEGLGAW*PQLALLPGLLR
Trigger: TCGCAACAGCCCTGGAAGCAAAGCCAGTTGGGGTCACCAGGCACCTAGACCCTCACTGCTTGTCTGCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp AGAGGGAGAGGTAGCAGCTGCCGTCCGGCACAGGGCTaGCCCTCAGAATGTGACACTAATATGGCACTGGGA +
Preference number: 3 (lower is better)
Translates to: RGRGSSCRPAQG*PSECDTNMALG
Trigger: TCCCAGTGCCATATTAGTGTCACATTCTGAGGGGCAGCCCTGTGCCGGACGGCAGCTGCTACCTCTCCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp TCTCCACTGTCCACACAGGGCCAGGCAACTGTTTCCTaGCCAGGTAGAAGGATAGCCCTCTCCCGACCAGCT +
Preference number: 3 (lower is better)
Translates to: SPLSTQGQATVS*PGRRIALSRPA
Trigger: AGCTGGTCGGGAGAGGGCTATCCTTCTACCTGGGCAGGAAACAGTTGCCTGGCCCTGTGTGGACAGTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp TTTGAAAAGGCACTGTGGCGTGGCCCGCTAAGTCTCTaGAGAGGCACCAGGGATGCCTTCGGACACAGCAGC +
Preference number: 3 (lower is better)
Translates to: FEKALWRGPLSL*RGTRDAFGHSS
Trigger: GCTGCTGTGTCCGAAGGCATCCCTGGTGCCTCTGCAGAGACTTAGCGGGCCACGCCACAGTGCCTTTTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp GTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATaGACATGCAGAGGTACCAGTGGGCACTTGGTGTGT +
Preference number: 3 (lower is better)
Translates to: VTGCWLASHTAP*TCRGTSGHLVC
Trigger: ACACACCAAGTGCCCACTGGTACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CCA 72 bp CAGCCTCCAACCATCAGGGGATGGGTTTGTGCTGGCTaGAGTCACCAGACCATAGGTCCGCACAGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: QPPTIRGWVCAG*SHQTIGPHRQR
Trigger: CCTTTGCCTGTGCGGACCTATGGTCTGGTGACTCCAGCCAGCACAAACCCATCCCCTGATGGTTGGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp CGCATCACCAGCTCTGGGCTGGAGGTTAGATCTGGCTaGACACCCAGCTCTACCCCTCACTTGGTGACAGAC +
Preference number: 3 (lower is better)
Translates to: RITSSGLEVRSG*TPSSTPHLVTD
Trigger: GTCTGTCACCAAGTGAGGGGTAGAGCTGGGTGTCCAGCCAGATCTAACCTCCAGCCCAGAGCTGGTGATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp CTCTCGGGAATGGCCTTGACAGAGCCGACTTCCCGCTaGAAGGATACTGGGGGCTCCTCCAGCACATTCTCT +
Preference number: 3 (lower is better)
Translates to: LSGMALTEPTSR*KDTGGSSSTFS
Trigger: AGAGAATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAGGCCATTCCCGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp AGGGCTGCCCCTCAGAATGTGACACTAATATGGCACTaGGACCATCGGCAGCTCCTCCGCCCTTCCCATCAC +
Preference number: 3 (lower is better)
Translates to: RAAPQNVTLIWH*DHRQLLRPSHH
Trigger: GTGATGGGAAGGGCGGAGGAGCTGCCGATGGTCCCAGTGCCATATTAGTGTCACATTCTGAGGGGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp CGACCTCAGGCAGCTCCTCCCACATCTTCTTGGCGATaGCCTGAATGCTCTCAGGGCTGTAAAGGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: RPQAAPPTSSWR*PECSQGCKGWW
Trigger: CCACCAGCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGGAGCTGCCTGAGGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp TGCGCACGACCTCAGGCAGCTCCTCCCACATCTTCTTaGCGATGGCCTGAATGCTCTCAGGGCTGTAAAGGC +
Preference number: 3 (lower is better)
Translates to: CARPQAAPPTSS*RWPECSQGCKG
Trigger: GCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGGAGCTGCCTGAGGTCGTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CAA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGAAGAGCGCTTGGCGGCTaGAGGGGAACTCTAAAGACC +
Preference number: 3 (lower is better)
Translates to: TSRPLGDSTDTADTRATRRALGG*RGTLKT
Trigger: GGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCT...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CAA 90 bp GCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCGCTGAGTCCAGCCCAGTGGATAATCAAGAGTaGACTATATGGGTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: AAPSPRARRGSDCAESSPVDNQE*TIWVPP
Trigger: GGGAGGAACCCATATAGTCAACTCTTGATTATCCAC...TGGGCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CAA 90 bp ATGGAATCGAGCCTCTCACTTCCCGGCCCAAGTCATGCCCACGGTTACCCTGTGTTGCCACGAACTCACTaGAGTAGTTGGGAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: MESSLSLPGPSHAHGYPVLPRTH*SSWEGH
Trigger: GTGCCCCTCCCAACTACTCAAGTGAGTTCGTGGCAA...CACAGGGTAACCGTGGGCATGACTTGGGCCGGGAAGTGAGAGGCTCGATTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 72 bp ACAAGAAGGAGCGGCTCTCTGCCAGCAGACAAGCAGTaGGGGTCTAGGTGCCTGGTGACCCCAACTGGCTTT +
Preference number: 3 (lower is better)
Translates to: TRRSGSLPADKQ*GSRCLVTPTGF
Trigger: AAAGCCAGTTGGGGTCACCAGGCACCTAGACCCTCACTGCTTGTCTGCTGGCAGAGAGCCGCTCCTTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 72 bp GATAACCCCACCCTGCCTATCCTGCCTGGGTTGCTGTaGGAATCAGGTGAGAGGAAGCTGTGGTGGCTGGGT +
Preference number: 3 (lower is better)
Translates to: DNPTLPILPGLL*ESGERKLWWLG
Trigger: ACCCAGCCACCACAGCTTCCTCTCACCTGATTCTCACAGCAACCCAGGCAGGATAGGCAGGGTGGGGTTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 72 bp GCCAGGCCGGAGGCTCGATGGTCTAAAGTTTGGCTCTaGAATCCCCTAGGTGCGCCGACCTTCCCAAACAAG +
Preference number: 3 (lower is better)
Translates to: ARPEARWSKVWL*NPLGAPTFPNK
Trigger: CTTGTTTGGGAAGGTCGGCGCACCTAGGGGATTTCAGAGCCAAACTTTAGACCATCGAGCCTCCGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp GGTCCACGGTACAAAAGCATCCTATGGTTATGTAACTaGAGCGGCCACCAAGCGTCCCCCTCTGGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: GPRYKSILWLCN*SGHQASPSGLW
Trigger: CCAGAGCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTTTGTACCGTGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 72 bp CAGGTGCTCTGTAACAAGGCACTGTCAGGCGCATCTTaGAAGAAGCCCTTGCCCAGCCTCCAACCATCAGGG +
Preference number: 3 (lower is better)
Translates to: QVLCNKALSGAS*KKPLPSLQPSG
Trigger: CCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGTGCCTTGTTACAGAGCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp CCTCTTGGCCCCGGGTGGAATGCTAAGCACAGCAGGTaGTCTGTAACAAGGCACTGTCAGGCGCATCTTGCA +
Preference number: 3 (lower is better)
Translates to: PLGPGWNAKHSR*SVTRHCQAHLA
Trigger: TGCAAGATGCGCCTGACAGTGCCTTGTTACAGAGCACCTGCTGTGCTTAGCATTCCACCCGGGGCCAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp CAGACCTCACAAATGGGGAGTCTTTGTCAGACCCCCTaGCATGGGTGGCAAGGGTGCAGACCTAGCAGCTTG +
Preference number: 3 (lower is better)
Translates to: QTSQMGSLCQTP*HGWQGCRPSSL
Trigger: CAAGCTGCTAGGTCTGCACCCTTGCCACCCATGGCAGGGGGTCTGACAAAGACTCCCCATTTGTGAGGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp AGAGGAGCGAGCCTGGGCACTGTGATGTTCACAGGATaGGCAGGAGGAGGAGCTAGCAAGCAAGATGGGGAA +
Preference number: 3 (lower is better)
Translates to: RGASLGTVMFTG*AGGGASKQDGE
Trigger: TTCCCCATCTTGCTTGCTAGCTCCTCCTCCTGCCCATCCTGTGAACATCACAGTGCCCAGGCTCGCTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp TGGCTGGGGCCACATGGATCCTCCCAGCCAGCTCACTaGATGGTTACCCTTAAGGTGACTCCAAGCAGCTCT +
Preference number: 3 (lower is better)
Translates to: WLGPHGSSQPAH*MVTLKVTPSSS
Trigger: AGAGCTGCTTGGAGTCACCTTAAGGGTAACCATCCAGTGAGCTGGCTGGGAGGATCCATGTGGCCCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp CCCTGCCCAGCCCTGAGGGCTGTGGGAAGTAGGTGCTaGTGGAGGTTGTCTTTCTCACTGTTTTCTAGCTCC +
Preference number: 3 (lower is better)
Translates to: PCPALRAVGSRC*WRLSFSLFSSS
Trigger: GGAGCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACCTACTTCCCACAGCCCTCAGGGCTGGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CAA 90 bp AGGTGCTCTGTAACAAGGCACTGTCAGGCGCATCTTGCAAGAAGCCCTTGCCCACCACTCAGGAGACTTTaGTTCTGGCCCTGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: RCSVTRHCQAHLARSPCPPLRRL*FWPWSC
Trigger: GCAGGACCAGGGCCAGAACAAAAGTCTCCTGAGTGG...TGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGTGCCTTGTTACAGAGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 72 bp GGCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTaGAACCCAAGAAGTGATCATGCAGACCCTGCCTCA +
Preference number: 3 (lower is better)
Translates to: GPGQSQGWQLSN*NPRSDHADPAS
Trigger: TGAGGCAGGGTCTGCATGATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR TCA 72 bp CGTCTGAGGCTGGCTAATGTCTGCTGTTGCTGCCCCTaGGAGAGCAGGTGCACAAAAGCCAGCTCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: RLRLANVCCCCP*ESRCTKASSSF
Trigger: GAAGGAAGAGCTGGCTTTTGTGCACCTGCTCTCTCAGGGGCAGCAACAGCAGACATTAGCCAGCCTCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp CGGCCACGCACTCTGGTAAAGACGAAAACTACGTCCTaGGCCCCGGTAGGTTCTAAGCTGCCGGAAAGTGAA +
Preference number: 3 (lower is better)
Translates to: RPRTLVKTKTTS*APVGSKLPESE
Trigger: TTCACTTTCCGGCAGCTTAGAACCTACCGGGGCGCAGGACGTAGTTTTCGTCTTTACCAGAGTGCGTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp AACCCAACCTGGGGCTGCCTGAGCCAGGGGAGCCTCTaGTTGCTCATGTCGGCTCCTATATCAACACAGTTT +
Preference number: 3 (lower is better)
Translates to: NPTWGCLSQGSL*LLMSAPISTQF
Trigger: AAACTGTGTTGATATAGGAGCCGACATGAGCAAGCAGAGGCTCCCCTGGCTCAGGCAGCCCCAGGTTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp TTCCCCTGCCCAGCCCTGAGGGCTGTGGGAAGTAGGTaGTGGTGGAGGTTGTCTTTCTCACTGTTTTCTAGC +
Preference number: 3 (lower is better)
Translates to: FPCPALRAVGSR*WWRLSFSLFSS
Trigger: GCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACCTACTTCCCACAGCCCTCAGGGCTGGGCAGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp AACTCCCAAACTTGTATGCGAGGTAAAGCTTTCCCCTaGCCAGCCCTGAGGGCTGTGGGAAGTAGGTGCTGG +
Preference number: 3 (lower is better)
Translates to: NSQTCMRGKAFP*PALRAVGSRCW
Trigger: CCAGCACCTACTTCCCACAGCCCTCAGGGCTGGGCAGGGGAAAGCTTTACCTCGCATACAAGTTTGGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp TATTCAGAGAAATCTTTCCAACCACCCTCAGCCTGCTaGCTGCAGACTCTGGTGGCCTGTCCCCCTCAGGGT +
Preference number: 3 (lower is better)
Translates to: YSEKSFQPPSAC*LQTLVACPPQG
Trigger: ACCCTGAGGGGGACAGGCCACCAGAGTCTGCAGCCAGCAGGCTGAGGGTGGTTGGAAAGATTTCTCTGAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 72 bp AGTGGCAGGACCCCATGGTTGCTACTGTGCGTAGGCTaGGAGTCTCCTCGCTGTTACGTAACTGAGGACTTC +
Preference number: 3 (lower is better)
Translates to: SGRTPWLLLCVG*ESPRCYVTEDF
Trigger: GAAGTCCTCAGTTACGTAACAGCGAGGAGACTCTCAGCCTACGCACAGTAGCAACCATGGGGTCCTGCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp CAGCTCTTCTCAGACCCCTATACAAGACCTCTCTGGTaGCCCTACACAGCATCACGACAAGGTCCCTGCAGT +
Preference number: 3 (lower is better)
Translates to: QLFSDPYTRPLW*PYTASRQGPCS
Trigger: ACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp TTTCGTCATCCGCACTGTGCCCCAAAGGTTCACTTCTaGCACCTGCTTGTAGGTCTCCAGGCTGGTGAACTC +
Preference number: 3 (lower is better)
Translates to: FRHPHCAPKVHF*HLLVGLQAGEL
Trigger: GAGTTCACCAGCCTGGAGACCTACAAGCAGGTGGCAGAAGTGAACCTTTGGGGCACAGTGCGGATGACGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp CAGTGGTGTTTGGCTTCGGTCCCAACATACAGGCCCTaGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAA +
Preference number: 3 (lower is better)
Translates to: QWCLASVPTYRP*AVAGMAAFKLK
Trigger: TTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGCCTGTATGTTGGGACCGAAGCCAAACACCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CAA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGAAGGCAGGAGAACCGCTaGAACCAGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRRQENR*NQGGGG
Trigger: ACCTCCGCCTCCCTGGTTCAAGCGGTTCTCCTGCCT...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CAA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCACAGGGGAGCCTCTGCTaGCTCATGTCGGCTCCTATA +
Preference number: 3 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGAQGSLC*LMSAPI
Trigger: TATAGGAGCCGACATGAGCAAGCAGAGGCTCCCCTG...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CAA 90 bp TTCCCCTGCCCAGCCCTGAGGGCTGTGGGAAGTAGGTGCTGGTGGAGGTTGTCTTTTGAATGCAGATGCTaGGCCAATGAGAACCCAAAT +
Preference number: 3 (lower is better)
Translates to: FPCPALRAVGSRCWWRLSFECRC*ANENPN
Trigger: ATTTGGGTTCTCATTGGCCAAGCATCTGCATTCAAA...AGACAACCTCCACCAGCACCTACTTCCCACAGCCCTCAGGGCTGGGCAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 72 bp GGGTCTGGATCTTGGCTCTCTCGTTTCCTGGCTCTGTaGTTTTGGGCAAATGACTTCACCTCCCTGAGGCTC +
Preference number: 3 (lower is better)
Translates to: GSGSWLSRFLAL*FWANDFTSLRL
Trigger: GAGCCTCAGGGAGGTGAAGTCATTTGCCCAAAATCACAGAGCCAGGAAACGAGAGAGCCAAGATCCAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 72 bp CCACCACTTTCTCCACCTCTTCGCTGCTGCAGACATTaGGCTGGACGGTTCTCAATCGGTCACTGTTTAGGC +
Preference number: 3 (lower is better)
Translates to: PPLSPPLRCCRH*AGRFSIGHCLG
Trigger: GCCTAAACAGTGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGAAGAGGTGGAGAAAGTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 72 bp AGATCATGTCGGAGATGGCTCCAGGCAAGTGGGTCATaGTCTGCATTCGCAGCCACCAGTAGTAGTCCATGG +
Preference number: 3 (lower is better)
Translates to: RSCRRWLQASGS*SAFAATSSSPW
Trigger: CCATGGACTACTACTGGTGGCTGCGAATGCAGATCATGACCCACTTGCCTGGAGCCATCTCCGACATGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp AGGAGAGCGAGAACACTGTTTCTGAAGGGTGCTGCTTaGTTCTTTGTTCCCGGTTTCCGAAGCGCGAATCCC +
Preference number: 3 (lower is better)
Translates to: RRARTLFLKGAA*FFVPGFRSANP
Trigger: GGGATTCGCGCTTCGGAAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAGAAACAGTGTTCTCGCTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 72 bp AATAAGATAACCCCACCCTGCCTATCCTGCCTGGGTTaGTGTGAGAATCAGGTGAGAGGAAGCTGTGGTGGC +
Preference number: 3 (lower is better)
Translates to: NKITPPCLSCLG*CENQVRGSCGG
Trigger: GCCACCACAGCTTCCTCTCACCTGATTCTCACAGCAACCCAGGCAGGATAGGCAGGGTGGGGTTATCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp GCTTTAATGCAGTCTTCCACCTGGTGGCCCTTCAAATaGCCCTTGGCGTGGAGCTCACATGATCTGAACCTC +
Preference number: 3 (lower is better)
Translates to: ALMQSSTWWPFK*PLAWSSHDLNL
Trigger: GAGGTTCAGATCATGTGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCATTAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp CTGTTCGAAATACAGGCAGTGAACAGACCTCACAAATaGGGAGTCTTTGTCAGACCCCCTGCCATGGGTGGC +
Preference number: 3 (lower is better)
Translates to: LFEIQAVNRPHK*GVFVRPPAMGG
Trigger: GCCACCCATGGCAGGGGGTCTGACAAAGACTCCCCATTTGTGAGGTCTGTTCACTGCCTGTATTTCGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp ATTCAGCTCTTCTCAGACCCCTATACAAGACCTCTCTaGTGCCCCTACACAGCATCACGACAAGGTCCCTGC +
Preference number: 3 (lower is better)
Translates to: IQLFSDPYTRPL*CPYTASRQGPC
Trigger: GCAGGGACCTTGTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGAGCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp TCTTCCACCTGGTGGCCCTTCAAATGCCCCTTGGCGTaGAGCTCACATGATCTGAACCTCAGAAAGGTGGAT +
Preference number: 3 (lower is better)
Translates to: SSTWWPFKCPLA*SSHDLNLRKVD
Trigger: ATCCACCTTTCTGAGGTTCAGATCATGTGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGGTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CAA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTCTCTCGGGAATGGCCTaGACAGAGCCGACTTCCCGC +
Preference number: 3 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSLSGMA*TEPTSR
Trigger: GCGGGAAGTCGGCTCTGTCAAGGCCATTCCCGAGAG...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CAA 90 bp ATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCGGACAGAGAGCCTCTTaGTTTTGGCATGAAGAGTCC +
Preference number: 3 (lower is better)
Translates to: IQDLSGAPTQHHDKVPAVGQRAS*FWHEES
Trigger: GGACTCTTCATGCCAAAACAAAGAGGCTCTCTGTCC...GACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 72 bp TTCTCAATCGGTCACTGTTTAGGCTGTCCAGCTCCTTaGCCCCATCATGGCCTTTGTCCTAACACCGCTTCC +
Preference number: 3 (lower is better)
Translates to: FSIGHCLGCPAP*PHHGLCPNTAS
Trigger: GGAAGCGGTGTTAGGACAAAGGCCATGATGGGGTCAAGGAGCTGGACAGCCTAAACAGTGACCGATTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp GACATGCAGAGGTACCAGTGGGCACTTGGTGTGTGCTaGCCAGATGAGGACACAGAGTTAGTCAGAAGATTC +
Preference number: 3 (lower is better)
Translates to: DMQRYQWALGVC*PDEDTELVRRF
Trigger: GAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACACACCAAGTGCCCACTGGTACCTCTGCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 72 bp AGCAGGTGCACAAAAGCCAGCTCTTCCTTCTTGGGGTaGTTCTGTGGAGTCTACAAAGATTCTGCCACGGAG +
Preference number: 3 (lower is better)
Translates to: SRCTKASSSFLG*FCGVYKDSATE
Trigger: CTCCGTGGCAGAATCTTTGTAGACTCCACAGAAGCACCCCAAGAAGGAAGAGCTGGCTTTTGTGCACCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp CACAAAAGCCAGCTCTTCCTTCTTGGGGTGCTTCTGTaGAGTCTACAAAGATTCTGCCACGGAGACCTCCGA +
Preference number: 3 (lower is better)
Translates to: HKSQLFLLGVLL*SLQRFCHGDLR
Trigger: TCGGAGGTCTCCGTGGCAGAATCTTTGTAGACTCCACAGAAGCACCCCAAGAAGGAAGAGCTGGCTTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp AACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTaGCCCTTCAAATGCCCCTTGGCGTGGAGCTCACAT +
Preference number: 3 (lower is better)
Translates to: NTCLALMQSSTW*PFKCPLAWSSH
Trigger: ATGTGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp GAAAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTaGTGGCCCTTCAAATGCCCCTTGGCGTGGAGCTCA +
Preference number: 3 (lower is better)
Translates to: ENTCLALMQSST*WPFKCPLAWSS
Trigger: TGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp ACTTTCTCCACCTCTTCGCTGCTGCAGACATTGAGCTaGACGGTTCTCAATCGGTCACTGTTTAGGCTGTCC +
Preference number: 3 (lower is better)
Translates to: TFSTSSLLQTLS*TVLNRSLFRLS
Trigger: GGACAGCCTAAACAGTGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGAAGAGGTGGAGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CAA 90 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCGCGGAGATGGTGCCATaGCACTCCAGCCTAGGGGAC +
Preference number: 3 (lower is better)
Translates to: LSNGRPELLNLTWPLPNIAEMVP*HSSLGD
Trigger: GTCCCCTAGGCTGGAGTGCAATGGCACCATCTCCGC...GATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 72 bp GCCCTGGTCCTGCCGTGGATTTACTGTGACACTGAGTaGGTCACTTTCCTTCTTTGGGCCTCAGTTATGTCA +
Preference number: 3 (lower is better)
Translates to: ALVLPWIYCDTE*VTFLLWASVMS
Trigger: TGACATAACTGAGGCCCAAAGAAGGAAAGTGACTCACTCAGTGTCACAGTAAATCCACGGCAGGACCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 72 bp CCTTCAAATGCCCCTTGGCGTGGAGCTCACATGATCTaGACCTCAGAAAGGTGGATTCTAGCTGACATGCAC +
Preference number: 3 (lower is better)
Translates to: PSNAPWRGAHMI*TSERWILADMH
Trigger: GTGCATGTCAGCTAGAATCCACCTTTCTGAGGTTCAGATCATGTGAGCTCCACGCCAAGGGGCATTTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp AGAGTAATTAAGTCTCACCAAAGGAGAAGCACATGGTaGTTCTGGGACCCAGCATCTCCTGAGGTTGGTCCC +
Preference number: 3 (lower is better)
Translates to: RVIKSHQRRSTW*FWDPASPEVGP
Trigger: GGGACCAACCTCAGGAGATGCTGGGTCCCAGAAGCACCATGTGCTTCTCCTTTGGTGAGACTTAATTACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp TCTCCATCTTGGCGATCTTTTCATCAAAGTACTTCTTaGCGTAGTCCTTGCGCACGACCTCAGGCAGCTCCT +
Preference number: 3 (lower is better)
Translates to: SPSWRSFHQSTS*RSPCARPQAAP
Trigger: AGGAGCTGCCTGAGGTCGTGCGCAAGGACTACGGCAAGAAGTACTTTGATGAAAAGATCGCCAAGATGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp ATCTCACCAAAGCTAGTAAACCTGTCTCAGAGCGCTTaGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCC +
Preference number: 3 (lower is better)
Translates to: ISPKLVNLSQSA*RLEGNSKDHSA
Trigger: GGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTTTACTAGCTTTGGTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp TCCTGTCTCAATCTCGGGCCTTTAGACTTCTTCTGGTaGACATTAGCATCACACTCTGTGGCCTCCAGACTC +
Preference number: 3 (lower is better)
Translates to: SCLNLGPLDFFW*TLASHSVASRL
Trigger: GAGTCTGGAGGCCACAGAGTGTGATGCTAATGTCCACCAGAAGAAGTCTAAAGGCCCGAGATTGAGACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp CACTCCTGTCTCAATCTCGGGCCTTTAGACTTCTTCTaGTGGACATTAGCATCACACTCTGTGGCCTCCAGA +
Preference number: 3 (lower is better)
Translates to: HSCLNLGPLDFF*WTLASHSVASR
Trigger: TCTGGAGGCCACAGAGTGTGATGCTAATGTCCACCAGAAGAAGTCTAAAGGCCCGAGATTGAGACAGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp GAGAGAGCAGGTGCACAAAAGCCAGCTCTTCCTTCTTaGGGTGCTTCTGTGGAGTCTACAAAGATTCTGCCA +
Preference number: 3 (lower is better)
Translates to: ERAGAQKPALPS*GASVESTKILP
Trigger: TGGCAGAATCTTTGTAGACTCCACAGAAGCACCCCAAGAAGGAAGAGCTGGCTTTTGTGCACCTGCTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CAA 90 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCCATCAGGGGATGGGTTaGTGCTGGCTGGAGTCACCA +
Preference number: 3 (lower is better)
Translates to: LSNGRPELLNLTWPLPNIHQGMG*CWLESP
Trigger: TGGTGACTCCAGCCAGCACAAACCCATCCCCTGATG...GATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CAA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCAGAGGAGATGGAAATCTaGTCAAATGGGAGACCTGAG +
Preference number: 3 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGAEEMEI*SNGRPE
Trigger: CTCAGGTCTCCCATTTGACAAGATTTCCATCTCCTC...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp CTGCTTGCTCATGTCGGCTCCTATATCAACACAGTTTaGACAGGTTTGCAGAGCCAGGCCCTGTTCGAAATA +
Preference number: 3 (lower is better)
Translates to: LLAHVGSYINTV*TGLQSQALFEI
Trigger: TATTTCGAACAGGGCCTGGCTCTGCAAACCTGTGCAAACTGTGTTGATATAGGAGCCGACATGAGCAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp TGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCTaGTGTGTGTCATCAAGAATGAGGGATTGGATAACC +
Preference number: 3 (lower is better)
Translates to: WRLEGNSKDHSA*CVSSRMRDWIT
Trigger: GGTTATCCAATCCCTCATTCTTGATGACACACACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp TGGCTGCTCAGGGACAAGCTTTTAGTTCCGCTGTGTTaGTGCGTGTGCAACTGGCTTATTGATAAACCCACT +
Preference number: 3 (lower is better)
Translates to: WLLRDKLLVPLC*CVCNWLIDKPT
Trigger: AGTGGGTTTATCAATAAGCCAGTTGCACACGCACCAACACAGCGGAACTAAAAGCTTGTCCCTGAGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CAA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAGCGGAGATGGTGCCATaGCACTCCAGCCTAGGGGAC +
Preference number: 3 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQAEMVP*HSSLGD
Trigger: GTCCCCTAGGCTGGAGTGCAATGGCACCATCTCCGC...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CAA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAAGGCAGGAGAACCGCTaGAACCAGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQRQENR*NQGGGG
Trigger: ACCTCCGCCTCCCTGGTTCAAGCGGTTCTCCTGCCT...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR GCA 72 bp TTCAATCACTGGAAACGATTAAAAGCCAGAACAACCTaGACAGGCCGGCCCAGCAGTTCTAGCTTACTCAGA +
Preference number: 3 (lower is better)
Translates to: FNHWKRLKARTT*TGRPSSSSLLR
Trigger: TCTGAGTAAGCTAGAACTGCTGGGCCGGCCTGTGCAGGTTGTTCTGGCTTTTAATCGTTTCCAGTGATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR GCA 72 bp CTGCTCAGGGACAAGCTTTTAGTTCCGCTGTGTTGGTaGGTGTGCAACTGGCTTATTGATAAACCCACTTCT +
Preference number: 3 (lower is better)
Translates to: LLRDKLLVPLCW*VCNWLIDKPTS
Trigger: AGAAGTGGGTTTATCAATAAGCCAGTTGCACACGCACCAACACAGCGGAACTAAAAGCTTGTCCCTGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp CATTCAGCCTGGTGTGTGTCATCAAGAATGAGGGATTaGATAACCACAGCTGAAACCTGTTCAGACAGCGAG +
Preference number: 3 (lower is better)
Translates to: HSAWCVSSRMRD*ITTAETCSDSE
Trigger: CTCGCTGTCTGAACAGGTTTCAGCTGTGGTTATCCAATCCCTCATTCTTGATGACACACACCAGGCTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CAA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAGGAGGACAGTGGTGTTaGGCTTCGGTCCCAACATAC +
Preference number: 3 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRGGQWC*ASVPTY
Trigger: GTATGTTGGGACCGAAGCCAAACACCACTGTCCTCC...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CAA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAGTGCTGCTTGCTTCTTaGTTCCCGGTTTCCGAAGCG +
Preference number: 3 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRVLLAS*FPVSEA
Trigger: CGCTTCGGAAACCGGGAACAAAGAAGCAAGCAGCAC...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CAA 90 bp TCTTCTCAGACCCCTATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACTGTGCAACTGGCTTATaGATAAACCCACTTCTTTAT +
Preference number: 3 (lower is better)
Translates to: SSQTPIQDLSGAPTQHHDCATGL*INPLLY
Trigger: ATAAAGAAGTGGGTTTATCAATAAGCCAGTTGCACA...GTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR TCA 72 bp CTTGGAGAAGTCCAGAAGCTCTCCAAGGCATTCATATaGAGCCCACCTCATTTTACTTGCCATCAGAGGGAA +
Preference number: 3 (lower is better)
Translates to: LGEVQKLSKAFI*SPPHFTCHQRE
Trigger: TTCCCTCTGATGGCAAGTAAAATGAGGTGGGCTTCATATGAATGCCTTGGAGAGCTTCTGGACTTCTCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp AGTTCTGGCCAAGAGAATGAGAGCACAGGTGATATCTaGAGAGGAAGCTTCTGGGTCATGTCAGGAGATTTT +
Preference number: 3 (lower is better)
Translates to: SSGQENESTGDI*RGSFWVMSGDF
Trigger: AAAATCTCCTGACATGACCCAGAAGCTTCCTCTGCAGATATCACCTGTGCTCTCATTCTCTTGGCCAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp TTTACCACCCGAGCAGAGAAAGCAAGTTGTCCTGAATaGCCACTCTTCCCTTCATCCTTCTTCTATAGCAGT +
Preference number: 3 (lower is better)
Translates to: FTTRAEKASCPE*PLFPSSFFYSS
Trigger: ACTGCTATAGAAGAAGGATGAAGGGAAGAGTGGGCATTCAGGACAACTTGCTTTCTCTGCTCGGGTGGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CAA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTGGATAATCAAGAGTaGACTATATGGGTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLVDNQE*TIWVPP
Trigger: GGGAGGAACCCATATAGTCAACTCTTGATTATCCAC...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
3UTR TCA 72 bp GGCAAATGGATCCAAAACAGTCCTGGAATGCAAATGTaGAGTATTTCCACAGCCGTGGCAGGAACACATAAC +
Preference number: 3 (lower is better)
Translates to: GKWIQNSPGMQM*SISTAVAGTHN
Trigger: GTTATGTGTTCCTGCCACGGCTGTGGAAATACTTCACATTTGCATTCCAGGACTGTTTTGGATCCATTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR TCA 72 bp CTAAGCTGCCGGAAAGTGAATGGTGAATATGAGGTTTaGGTTAGCACTGGAGTTATTTGGAGGGATGGTAGC +
Preference number: 3 (lower is better)
Translates to: LSCRKVNGEYEV*VSTGVIWRDGS
Trigger: GCTACCATCCCTCCAAATAACTCCAGTGCTAACTCAAACCTCATATTCACCATTCACTTTCCGGCAGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR TCA 72 bp CAGCGAGGAGATGGAAATCTTGTCAAATGGGAGACCTaGGCTCTTAAACCTGACTTGGCCACTTCCAAATAT +
Preference number: 3 (lower is better)
Translates to: QRGDGNLVKWET*ALKPDLATSKY
Trigger: ATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAAGATTTCCATCTCCTCGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR-3UTR CAA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGTGGATAATCAAGAGTaGACTATATGGGTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVVDNQE*TIWVPP
Trigger: GGGAGGAACCCATATAGTCAACTCTTGATTATCCAC...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
3UTR TCA 72 bp ATATGTTCAGGTGGTTTAGCACCTCAGGGAAGAACATaGGGACACTCGACACATGTTATACGTCAGCATCTT +
Preference number: 3 (lower is better)
Translates to: ICSGGLAPQGRT*GHSTHVIRQHL
Trigger: AAGATGCTGACGTATAACATGTGTCGAGTGTCCTCATGTTCTTCCCTGAGGTGCTAAACCACCTGAACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR GCA 72 bp AGGGACAAGCTTTTAGTTCCGCTGTGTTGGTGCGTGTaGAACTGGCTTATTGATAAACCCACTTCTTTATCT +
Preference number: 3 (lower is better)
Translates to: RDKLLVPLCWCV*NWLIDKPTSLS
Trigger: AGATAAAGAAGTGGGTTTATCAATAAGCCAGTTGCACACGCACCAACACAGCGGAACTAAAAGCTTGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp GTCCTGGAATGCAAATGTGAAGTATTTCCACAGCCGTaGCAGGAACACATAACTGGCACTATTTATAAGCGA +
Preference number: 3 (lower is better)
Translates to: VLECKCEVFPQP*QEHITGTIYKR
Trigger: TCGCTTATAAATAGTGCCAGTTATGTGTTCCTGCCACGGCTGTGGAAATACTTCACATTTGCATTCCAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CCA 72 bp GATTTTGATGAAGTAAATTATGATCCGCCCACTCAGTaGGTGCTTCAAAGCTTCATCAAGCAGCCAGCAAAC +
Preference number: 3 (lower is better)
Translates to: DFDEVNYDPPTQ*VLQSFIKQPAN
Trigger: GTTTGCTGGCTGCTTGATGAAGCTTTGAAGCACCCACTGAGTGGGCGGATCATAATTTACTTCATCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CCA 72 bp CACAAGAGGTATCTAAATGTCCTTCCTCTTGGGACTTaGTTAACCCTGTTGCTATCATTCAGCTCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: HKRYLNVLPLGT*LTLLLSFSSSQ
Trigger: CTGAGAAGAGCTGAATGATAGCAACAGGGTTAACCAAGTCCCAAGAGGAAGGACATTTAGATACCTCTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CAA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATCTGAAGGGTGCTGCTaGCTTCTTTGTTCCCGGTTT +
Preference number: 3 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQSEGCC*LLCSRF
Trigger: AAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAGA...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR-3UTR CAA 90 bp ATTTTAGGCCGGGTACATATTGTCTCAGAATACTCACTACATTTTCCAGCCTTCACACAAGGAAGCCTTTaGAATGCAGATGCTTGGCCA +
Preference number: 3 (lower is better)
Translates to: ILGRVHIVSEYSLHFPAFTQGSL*NADAWP
Trigger: TGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTGT...GAAGGCTGGAAAATGTAGTGAGTATTCTGAGACAATATGTACCCGGCCTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CAA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAGTGGATAATCAAGAGTaGACTATATGGGTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRVDNQE*TIWVPP
Trigger: GGGAGGAACCCATATAGTCAACTCTTGATTATCCAC...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CCA 72 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTaGCCACTTCCAAATATCTGGAAGTCTATTTCAGAA +
Preference number: 3 (lower is better)
Translates to: LSNGRPELLNLT*PLPNIWKSISE
Trigger: TTCTGAAATAGACTTCCAGATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CCA 72 bp AAGCTTTTAGTTCCGCTGTGTTGGTGCGTGTGCAACTaGCTTATTGATAAACCCACTTCTTTATCTTACTGT +
Preference number: 3 (lower is better)
Translates to: KLLVPLCWCVCN*LIDKPTSLSYC
Trigger: ACAGTAAGATAAAGAAGTGGGTTTATCAATAAGCCAGTTGCACACGCACCAACACAGCGGAACTAAAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR-3UTR CAA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAGTGGATAATCAAGAGTaGACTATATGGGTTCCTCCC +
Preference number: 3 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQVDNQE*TIWVPP
Trigger: GGGAGGAACCCATATAGTCAACTCTTGATTATCCAC...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR TCA 72 bp ATGTTCTTAAAGAACATTAAATTCACTAGACAGAAATaGGGGTTCACTAGGAAAACCTGCCAAGGTAACCCC +
Preference number: 3 (lower is better)
Translates to: MFLKNIKFTRQK*GFTRKTCQGNP
Trigger: GGGGTTACCTTGGCAGGTTTTCCTAGTGAACCCTCATTTCTGTCTAGTGAATTTAATGTTCTTTAAGAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCAGCACTCCTGCGGCCTaGGGCCTCCGCCACCCGGAC +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGSTPAA*GLRHPD
Trigger: GTCCGGGTGGCGGAGGCCGCAGGCCGCAGGAGTGCT...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCGGCTGGTGGCAGCGATaGAGTTGCCGGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGGWWQR*SCRAPP
Trigger: TGGTGGAGCCCGGCAACTTCATCGCTGCCACCAGCC...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCGGCCCGGGAGGCAGCTaGATTGCCCATTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGGPGGS*IAHCEA
Trigger: GGCCTCACAATGGGCAATTCAGCTGCCTCCCGGGCC...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCCCGGCTCCGCCGCACTaGCATAAGTCCGACGGCCAA +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGPAPPH*HKSDGQ
Trigger: TTGGCCGTCGGACTTATGCCAGTGCGGCGGAGCCGG...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCCCAAGCGTCCCCCTCTaGGCTCTGGAGGGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGPSVPL*ALEGFG
Trigger: GCCGAAACCCTCCAGAGCCCAGAGGGGGACGCTTGG...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp TGCGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTGCCTGCGGCTGGTGGCAGCGATaGAGTTGCCGGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: CGLGGSWLSCLPACLPACGWWQR*SCRAPP
Trigger: TGGTGGAGCCCGGCAACTTCATCGCTGCCACCAGCC...GCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCGCTGAGTCCAGCCCACTGCCATGGCACCACTaGTCGTGCCAAGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AAPSPRARRGSDCAESSPLPWHH*SCQACP
Trigger: GGGGCAGGCTTGGCACGAGCAGTGGTGCCATGGCAG...TGGGCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCGCTGAGTCCAGCCCATCCCCCTCTGGGCTCTaGAGGGTTTCGGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: AAPSPRARRGSDCAESSPSPSGL*RVSALP
Trigger: AGGCAGGGCCGAAACCCTCCAGAGCCCAGAGGGGGA...TGGGCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 72 bp GCCGGGTTGGCCATGCGGCCCAGCATGCTGCTGATATaGACGACGCGGCCTTTGGCCCTTCGGATGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AGLAMRPSMLLI*TTRPLALRMRG
Trigger: CCCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCTGGGCCGCATGGCCAACCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCCAGGCAAGTGGGTCATaGTCTGCATTCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGQASGS*SAFAAT
Trigger: GGTGGCTGCGAATGCAGATCATGACCCACTTGCCTG...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCCTTCTTCCTTGGCACTaGCTGAACCCCGTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGLLPWH*LNPVAH
Trigger: GTGGGCTACGGGGTTCAGGCAGTGCCAAGGAAGAAG...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVGRGLR*RGLAEA
Trigger: AGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCC...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCGACCCCAACTGGCTTTaGTTCCAGGGCTGTTGCGAG +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGDPNWL*FQGCCE
Trigger: CTCGCAACAGCCCTGGAAGCAAAGCCAGTTGGGGTC...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CACCGCGCCCGGCCACGCACTCTGGTAAAGACGAAAACTACGTCCTGCGCCCCGCTGGGTAGCAGGACCTaGACTTGGCCCCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: HRARPRTLVKTKTTSCAPLGSRT*TWPLCL
Trigger: CAGGCACAGGGGCCAAGTGCAGGTCCTGCTACCCAG...CGGGGCGCAGGACGTAGTTTTCGTCTTTACCAGAGTGCGTGGCCGGGCGCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GCCCAGCATGCTGCTGATATTGACGACGCGGCCTTTGGCCCTTCGGATGAGGGGGCCGTGACAGGGGTCTaGAGAGGCGGGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: AQHAADIDDAAFGPSDEGAVTGV*RGGWPA
Trigger: TGCTGGCCACCCGCCTCTCCAGACCCCTGTCACGGC...CCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp GCTGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGCCGGCTCCGCCGCACTaGCATAAGTCCGACGGCCAA +
Preference number: 4 (lower is better)
Translates to: AADSGGLSPSGSTCPQAKPAPPH*HKSDGQ
Trigger: TTGGCCGTCGGACTTATGCCAGTGCGGCGGAGCCGG...CTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAGGGAGCGGGCCGGGTTaGCCATGCGGCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVGSGPG*PCGPAC
Trigger: GCATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCC...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCCCCTCAGAATGTGACACTAATATGGCACTGGGACCATCGGCAGCTCCTCCGCGGGAGCGGGCCGGGTTaGCCATGCGGCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: APQNVTLIWHWDHRQLLRGSGPG*PCGPAC
Trigger: GCATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCC...GCGGAGGAGCTGCCGATGGTCCCAGTGCCATATTAGTGTCACATTCTGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCTCACTGGCTGCTGGCTaGCCAGTCACACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGSLAAG*PVTQHH
Trigger: ATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGA...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCTGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGGGCTGCAGACTCTGGTaGCCTGTCCCCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: AADSGGLSPSGSTCPQAKGCRLW*PVPLRV
Trigger: GACCCTGAGGGGGACAGGCCACCAGAGTCTGCAGCC...CTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 72 bp CGAAACTGCGGACTAGGAGGAAGCTGGCTGTCCTGCTaGCCTGCCTGCCTGCCTGCCTGCCTGCCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RNCGLGGSWLSC*PACLPACLPLL
Trigger: AAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCAGTTTCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp CTTGCGCACGACCTCAGGCAGCTCCTCCCACATCTTCTTGGCGATGGCCTGAATCGGGCTCCACCACGCTaGCCTTCACGCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LAHDLRQLLPHLLGDGLNRAPPR*PSRPGG
Trigger: ACCCCCTGGGCGTGAAGGTCAGCGTGGTGGAGCCCG...ATTCAGGCCATCGCCAAGAAGATGTGGGAGGAGCTGCCTGAGGTCGTGCGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGAGCCTGCCTGCCTGCCTaGCTGCCGCTCCTTCGCCAC +
Preference number: 4 (lower is better)
Translates to: TSRPLGDSTDTADTRATRACLPA*LPLLRH
Trigger: GTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGC...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCCTCAGGGGAAACCCCCTCCTCAGGCCAAGACTaGCCCGCAGGCCACACCACC +
Preference number: 4 (lower is better)
Translates to: VPLHSITTRSLQSSGETPSSGQD*PAGHTT
Trigger: GGTGGTGTGGCCTGCGGGGCAGTCTTGGCCTGAGGA...GGGGGTTTCCCCTGAGGACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCTTCGAAGGCGGGCACTaGGGACCCTGCCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGFEGGH*GPCPGP
Trigger: CGGCCCGGGGCAGGGTCCCCAGTGCCCGCCTTCGAA...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CCAGCCTGCAGGGAAGAGTCTGATGCCCCTCGTGACATCACCGAGCTCTCCCGACCAAGCGTCCCCCTCTaGGCTCTGGAGGGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: PACREESDAPRDITELSRPSVPL*ALEGFG
Trigger: GCCGAAACCCTCCAGAGCCCAGAGGGGGACGCTTGG...TCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp TGCGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTGCCTGCGAGAGGAAGCTGTGGTaGCTGGGTAGCAGGACCTGC +
Preference number: 4 (lower is better)
Translates to: CGLGGSWLSCLPACLPACERKLW*LGSRTC
Trigger: GCAGGTCCTGCTACCCAGCCACCACAGCTTCCTCTC...GCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 72 bp CCGAACTTGGTGATGCAGTACGGGGAGCGGGCCGGGTaGGCCATGCGGCCCAGCATGCTGCTGATATTGACG +
Preference number: 4 (lower is better)
Translates to: PNLVMQYGERAG*AMRPSMLLILT
Trigger: CGTCAATATCAGCAGCATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCCGTACTGCATCACCAAGTTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCCTGAAACCCAAGAAGTaGTCATGCAGACCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGLKPKK*SCRPCL
Trigger: GAGGCAGGGTCTGCATGATCACTTCTTGGGTTTCAG...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp TGCGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTGCCTGCAGGCATGATGATGGCTaGGTCCCCTTTCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: CGLGGSWLSCLPACLPACRHDDG*VPFPPL
Trigger: CAGGGGAGGAAAGGGGACTCAGCCATCATCATGCCT...GCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCTGTCTGTGGAGCCACTaGTGCAGTAGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGCLWSH*CSRSPS
Trigger: AGATGGAGACCTACTGCAGCAGTGGCTCCACAGACA...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAGCACTCCTGCGGCCTaGGGCCTCCGCCACCCGGAC +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYASTPAA*GLRHPD
Trigger: GTCCGGGTGGCGGAGGCCGCAGGCCGCAGGAGTGCT...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAGRGLR*RGLAEA
Trigger: AGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCC...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCAGGGGAGCCTCTGCTTaGTCATGTCGGCTCCTATAT +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGRGASA*SCRLLY
Trigger: ATATAGGAGCCGACATGAGCAAGCAGAGGCTCCCCT...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGACAGCTGCCCACCCCGTaGCTCCGAATGCGCCACTCG +
Preference number: 4 (lower is better)
Translates to: TSRPLGDSTDTADTRATRQLPTP*LRMRHS
Trigger: CGAGTGGCGCATTCGGAGGCACGGGGTGGGCAGCTG...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAGCCGTGACAGGGGTCTaGAGAGGCGGGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVAVTGV*RGGWPA
Trigger: TGCTGGCCACCCGCCTCTCCAGACCCCTGTCACGGC...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTGGGAGCGGGCCGGGTTaGCCATGCGGCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCGSGPG*PCGPAC
Trigger: GCATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCC...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GACCCACCCCAGGAACCCTCACCTGCCTTTGGGCAGCCTCCACACCCTGCTCCTGGTTCCAAAACCAAATaGGCAGGGGGCTCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: DPPQEPSPAFGQPPHPAPGSKTK*AGGSAA
Trigger: TGCAGCGGAGCCCCCTGCCCATTTGGTTTTGGAACC...AGGAGCAGGGTGTGGAGGCTGCCCAAAGGCAGGTGAGGGTTCCTGGGGTGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp TGCGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTGCCTGCCCTGGTGACCCCAACTaGCTTTGCTTCCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CGLGGSWLSCLPACLPACPGDPN*LCFQGC
Trigger: ACAGCCCTGGAAGCAAAGCCAGTTGGGGTCACCAGG...GCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCATGCCTGGTTGCTGTCTaGCCAACCCAACCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPCLVAV*PTQPGA
Trigger: AGCCCCAGGTTGGGTTGGCCAGACAGCAACCAGGCA...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp CTTGGTGATGCAGTACGGGGAGCGGGCCGGGTTGGCCATGCGGCCCAGCATGCTATGCAGTCTTCCACCTaGTGGCCCTTCAAATGCCCC +
Preference number: 4 (lower is better)
Translates to: LGDAVRGAGRVGHAAQHAMQSST*WPFKCP
Trigger: GGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCAT...AGCATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCCGTACTGCATCACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp GAACTTGGTGATGCAGTACGGGGAGCGGGCCGGGTTGGCCATGCGGCCCAGCATAAAGGCACTGTGGCGTaGCCCGCTAAGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ELGDAVRGAGRVGHAAQHKGTVA*PAKSLQ
Trigger: CTGCAGAGACTTAGCGGGCCACGCCACAGTGCCTTT...ATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCCGTACTGCATCACCAAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCACGGGCTCCACCACGCTaGCCTTCACGCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYARAPPR*PSRPGG
Trigger: ACCCCCTGGGCGTGAAGGTCAGCGTGGTGGAGCCCG...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCCTCAGGGGAAACCCCCCGAGCCTGGGCACTGTaGTGTTCACAGGATGGGCAG +
Preference number: 4 (lower is better)
Translates to: VPLHSITTRSLQSSGETPRAWAL*CSQDGQ
Trigger: CTGCCCATCCTGTGAACATCACAGTGCCCAGGCTCG...GGGGGTTTCCCCTGAGGACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GCCCAGCATGCTGCTGATATTGACGACGCGGCCTTTGGCCCTTCGGATGAGGGGTCCCCAGTGGCCCTTTaGAAAGGCACTGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: AQHAADIDDAAFGPSDEGSPVAL*KGTVAW
Trigger: CCACGCCACAGTGCCTTTTCAAAGGGCCACTGGGGA...CCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGAGTAGCCCACTCCGGCTaGCCGGGCTCTTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: TSRPLGDSTDTADTRATRVAHSG*PGSSAF
Trigger: GAAGGCAGAAGAGCCCGGGCAGCCGGAGTGGGCTAC...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTGRGLR*RGLAEA
Trigger: AGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCC...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAAACCCAACCTGGGGCTaGCTGAGCCAGGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVNPTWG*LSQGSL
Trigger: GAGGCTCCCCTGGCTCAGGCAGCCCCAGGTTGGGTT...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGACCAGCCCTGGTCCCTTaGTCAACAGCTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: TSRPLGDSTDTADTRATRPALVP*STAAHP
Trigger: GGGGTGGGCAGCTGTTGAGCAAGGGACCAGGGCTGG...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCGCCTGCCTGCCTGCCTaGCTGCCTGCCGCTCCTTCG +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIACLPA*LPAAPS
Trigger: CGAAGGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGC...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp ATGGAATCGAGCCTCTCACTTCCCGGCCCAAGTCATGCCCACGGTTACCCTGTGCCGGCTCCGCCGCACTaGCATAAGTCCGACGGCCAA +
Preference number: 4 (lower is better)
Translates to: MESSLSLPGPSHAHGYPVPAPPH*HKSDGQ
Trigger: TTGGCCGTCGGACTTATGCCAGTGCGGCGGAGCCGG...CACAGGGTAACCGTGGGCATGACTTGGGCCGGGAAGTGAGAGGCTCGATTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACCGGCTCCGCCGCACTaGCATAAGTCCGACGGCCAA +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVPAPPH*HKSDGQ
Trigger: TTGGCCGTCGGACTTATGCCAGTGCGGCGGAGCCGG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCATTCGAAGGCGGGCACTaGGGACCCTGCCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPFEGGH*GPCPGP
Trigger: CGGCCCGGGGCAGGGTCCCCAGTGCCCGCCTTCGAA...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCGGAGGGATGGTAGCCTaGGCTTTTCAATCACTGGAA +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGGGMVA*AFQSLE
Trigger: TTCCAGTGATTGAAAAGCCCAGGCTACCATCCCTCC...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GAACTTGGTGATGCAGTACGGGGAGCGGGCCGGGTTGGCCATGCGGCCCAGCATGGGGGTTCACCATGTTaGCCACACTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: ELGDAVRGAGRVGHAAQHGGSPC*PHWSRT
Trigger: AGTTCGAGACCAGTGTGGCCAACATGGTGAACCCCC...ATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCCGTACTGCATCACCAAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp CTGTGGCCTCCAGACTCCAGGGCACACATGGTAAGCCAAGAAGCTCTCCGGGGACTGGCTGGGGCCACATaGATCCTCCCAGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LWPPDSRAHMVSQEALRGLAGAT*ILPASS
Trigger: TGAGCTGGCTGGGAGGATCCATGTGGCCCCAGCCAG...TCCCCGGAGAGCTTCTTGGCTTACCATGTGTGCCCTGGAGTCTGGAGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp CTTGACAGAGCCGACTTCCCGCTGGAAGGATACTGGGGGCTCCTCCAGCACATTCTACCCCGAACTTGGTaGTGCAGTACGGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LDRADFPLEGYWGLLQHILPRTW*CSTGSG
Trigger: CCCGCTCCCCGTACTGCATCACCAAGTTCGGGGTAG...AATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp CACACACCAGAGAGGCCTCATATACTGTGGGGTTGTTTCATCTCCCCCAGAGCACGGGCTCCACCACGCTaGCCTTCACGCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: HTPERPHILWGCFISPRARAPPR*PSRPGG
Trigger: ACCCCCTGGGCGTGAAGGTCAGCGTGGTGGAGCCCG...TGCTCTGGGGGAGATGAAACAACCCCACAGTATATGAGGCCTCTCTGGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTATCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVSTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGATCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: TSRPLGDSTDTADTRATRSTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCCCTGGAATGCAAATGTaGAGTATTTCCACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGPGMQM*SISTAV
Trigger: CACGGCTGTGGAAATACTTCACATTTGCATTCCAGG...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GTACCTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGGGAAGAGTCAGGCGGAGGTTGCAGTaGGCGGAGATGGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: VPPLEREPISPASLQGRVRRRLQ*AEMVPL
Trigger: CAATGGCACCATCTCCGCTCACTGCAACCTCCGCCT...GACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCGGCCCGGGAGGCAGCTaGATTGCCCATTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGGPGGS*IAHCEA
Trigger: GGCCTCACAATGGGCAATTCAGCTGCCTCCCGGGCC...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GACCCACCCCAGGAACCCTCACCTGCCTTTGGGCAGCCTCCACACCCTGCTCCTCAGTCTGTATTCCCATaGCCCCCAGTGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: DPPQEPSPAFGQPPHPAPQSVFP*PPVLLL
Trigger: CAAGAGCAACACTGGGGGTCATGGGAATACAGACTG...AGGAGCAGGGTGTGGAGGCTGCCCAAAGGCAGGTGAGGGTTCCTGGGGTGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCCTCAGGGGAAACCCCCCCCTCCTATCTTCACTaGCAGACCCACCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VPLHSITTRSLQSSGETPPSYLH*QTHPRN
Trigger: GTTCCTGGGGTGGGTCTGTCAGTGAAGATAGGAGGG...GGGGGTTTCCCCTGAGGACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCAC
61% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCCATCAAAGTACTTCTTaGCGTAGTCCTTGCGCACGA +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGHQSTS*RSPCAR
Trigger: TCGTGCGCAAGGACTACGGCAAGAAGTACTTTGATG...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAGCACTTGGTGTGTGCTaGCCAGATGAGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPALGVC*PDEDTE
Trigger: CTCTGTGTCCTCATCTGGGCAGCACACACCAAGTGC...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CAGGTACCAGGAAAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTGGCCAGCACTCCTGCGGCCTaGGGCCTCCGCCACCCGGAC +
Preference number: 4 (lower is better)
Translates to: QVPGKHVSCFNAVFHLVASTPAA*GLRHPD
Trigger: GTCCGGGTGGCGGAGGCCGCAGGCCGCAGGAGTGCT...GGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTTTCCTGGTACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp CAGGTACCAGGAAAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTGGCCGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: QVPGKHVSCFNAVFHLVAGRGLR*RGLAEA
Trigger: AGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCC...GGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTTTCCTGGTACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp CCAGCCTGCAGGGAAGAGTCTGATGCCCCTCGTGACATCACCGAGCTCTCCCGACTGTCAGGCGCATCTTaGAAGAAGCCCTTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PACREESDAPRDITELSRLSGAS*KKPLPS
Trigger: GCTGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAG...TCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAGGGCAGTGGGCTGCCTaGTGTCGGACGACCGTGCCT +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAGQWAA*CRTTVP
Trigger: AGGCACGGTCGTCCGACAGCAGGCAGCCCACTGCCC...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CTTGCGCACGACCTCAGGCAGCTCCTCCCACATCTTCTTGGCGATGGCCTGAATGGCCCGCTAAGTCTCTaGAGAGGCACCAGGGATGCC +
Preference number: 4 (lower is better)
Translates to: LAHDLRQLLPHLLGDGLNGPLSL*RGTRDA
Trigger: GGCATCCCTGGTGCCTCTGCAGAGACTTAGCGGGCC...ATTCAGGCCATCGCCAAGAAGATGTGGGAGGAGCTGCCTGAGGTCGTGCGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGGGAGCGGGCCGGGTTaGCCATGCGGCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEGSGPG*PCGPAC
Trigger: GCATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCC...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCTCCCCCTCTGGGCTCTaGAGGGTTTCGGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGSPSGL*RVSALP
Trigger: AGGCAGGGCCGAAACCCTCCAGAGCCCAGAGGGGGA...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CTTGACAGAGCCGACTTCCCGCTGGAAGGATACTGGGGGCTCCTCCAGCACATTTCAGACCCCCTGCCATaGGTGGCAAGGGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: LDRADFPLEGYWGLLQHISDPLP*VARVQT
Trigger: GGTCTGCACCCTTGCCACCCATGGCAGGGGGTCTGA...AATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGACTTGGCCCCTGTGCCTaGTTGCTGTCTGGCCAACCC +
Preference number: 4 (lower is better)
Translates to: TSRPLGDSTDTADTRATRLGPCA*LLSGQP
Trigger: GGGTTGGCCAGACAGCAACCAGGCACAGGGGCCAAG...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp CTTGACAGAGCCGACTTCCCGCTGGAAGGATACTGGGGGCTCCTCCAGCACATTGAGCCGACTTCCCGCTaGAAGGATACTGGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LDRADFPLEGYWGLLQHIEPTSR*KDTGGS
Trigger: GGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTC...AATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp CCAGCCTGCAGGGAAGAGTCTGATGCCCCTCGTGACATCACCGAGCTCTCCCGACTGTCTCAGAGCGCTTaGCGGCTTGAGGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: PACREESDAPRDITELSRLSQSA*RLEGNS
Trigger: AGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAG...TCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GCTGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGCAGTCTTCCACCTGGTaGCCCTTCAAATGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: AADSGGLSPSGSTCPQAKQSSTW*PFKCPL
Trigger: CAAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTG...CTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 72 bp AGCCCTTGCCCAGCCTCCAACCATCAGGGGATGGGTTaGTGCTGGCTGGAGTCACCAGACCATAGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: SPCPASNHQGMG*CWLESPDHRSA
Trigger: TGCGGACCTATGGTCTGGTGACTCCAGCCAGCACAAACCCATCCCCTGATGGTTGGAGGCTGGGCAAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 72 bp TCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCATaGGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SHHSPGSPIVPP*EREPISPASLQ
Trigger: CTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 72 bp TCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATaGTACCTCCATTGGAACGAGAGCCCATCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: SSALPITAPEVP*YLHWNESPSVP
Trigger: CGGGACTGATGGGCTCTCGTTCCAATGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAACGGGCTCCACCACGCTaGCCTTCACGCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKERAPPR*PSRPGG
Trigger: ACCCCCTGGGCGTGAAGGTCAGCGTGGTGGAGCCCG...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCGGCTGGTGGCAGCGATaGAGTTGCCGGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIGWWQR*SCRAPP
Trigger: TGGTGGAGCCCGGCAACTTCATCGCTGCCACCAGCC...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCGGAAACGCGGAGTCTaGTTCGAAGGCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGRKRGV*FEGGHW
Trigger: CCAGTGCCCGCCTTCGAATCAGACTCCGCGTTTCCG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CTTGACAGAGCCGACTTCCCGCTGGAAGGATACTGGGGGCTCCTCCAGCACATTCTGGTCTTGAACTCCTaGCCTCAGGCGATCCGACCG +
Preference number: 4 (lower is better)
Translates to: LDRADFPLEGYWGLLQHILVLNS*PQAIRP
Trigger: CGGTCGGATCGCCTGAGGTCAGGAGTTCAAGACCAG...AATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCATGACTTCACCTCCCTaGGGCTCAGTTTCCTTATTT +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGMTSPP*GSVSLF
Trigger: AAATAAGGAAACTGAGCCTCAGGGAGGTGAAGTCAT...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCTGGCACCACTGCTCGTaGCAAGCCTGCCCCATCGAC +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGWHHCS*QACPID
Trigger: GTCGATGGGGCAGGCTTGGCACGAGCAGTGGTGCCA...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp ACTGTCAGGCGCATCTTGCAAGAAGCCCTTGCCCAGCCTCCAACCATCAGGGGAGATGCCACAGTGCCCTaGCATGGCACCACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: TVRRILQEALAQPPTIRGDATVP*HGTTAR
Trigger: ACGAGCAGTGGTGCCATGGCAGGGCACTGTGGCATC...TCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCATGCTTCCAGGGCTGTTaGGAGCCACAGTGTTATGTG +
Preference number: 4 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPCFQGC*EPQCYV
Trigger: CACATAACACTGTGGCTCGCAACAGCCCTGGAAGCA...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGGCTTGCCTGCCTGCCTaGCTGCCTGCCTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWACLPA*LPACRS
Trigger: GGAGCGGCAGGCAGGCAGGCAGGCAGGCAGGCAAGC...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp ACTGTCAGGCGCATCTTGCAAGAAGCCCTTGCCCAGCCTCCAACCATCAGGGGATCAGTCCCGCCAGCCTaGAGGGAAGAGTCTGATGCC +
Preference number: 4 (lower is better)
Translates to: TVRRILQEALAQPPTIRGSVPPA*REESDA
Trigger: GGCATCAGACTCTTCCCTGCAGGCTGGCGGGACTGA...TCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGACCCACCCCAGGAACCCGACCCAGGGTTTCTGTaGTCCCTCTGCAGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: EESNATLLSSLTDPPQEPDPGFL*SLCRSP
Trigger: CGGAGACCTGCAGAGGGAGCACAGAAACCCTGGGTC...GGGTTCCTGGGGTGGGTCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp CCCGAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGACCCACCCCAGGAACAACCACCCTCAGCCTaGTGGCTGCAGACTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PEESNATLLSSLTDPPQEQPPSA*WLQTLV
Trigger: CACCAGAGTCTGCAGCCAGCAGGCTGAGGGTGGTTG...TTCCTGGGGTGGGTCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp TGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGACACCAGTAGTAGTCCATaGGGTGGTAGCGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: CRLWWPVPLRVYLSSGQDTSSSP*GGSGCR
Trigger: CCTACACCCGCTACCACCCCATGGACTACTACTGGT...GTCTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp ATGGAATCGAGCCTCTCACTTCCCGGCCCAAGTCATGCCCACGGTTACCCTGTGCACAGTGCCCTGCCATaGCACCACTGCTCGTGCCAA +
Preference number: 4 (lower is better)
Translates to: MESSLSLPGPSHAHGYPVHSALP*HHCSCQ
Trigger: TTGGCACGAGCAGTGGTGCCATGGCAGGGCACTGTG...CACAGGGTAACCGTGGGCATGACTTGGGCCGGGAAGTGAGAGGCTCGATTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCTCCCCCTCTGGGCTCTaGAGGGTTTCGGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVISPSGL*RVSALP
Trigger: AGGCAGGGCCGAAACCCTCCAGAGCCCAGAGGGGGA...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTCCAAGCGTCCCCCTCTaGGCTCTGGAGGGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCPSVPL*ALEGFG
Trigger: GCCGAAACCCTCCAGAGCCCAGAGGGGGACGCTTGG...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCGCCGCAGGGTCTTTCTaGAAGCCCCTCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGAAGSF*KPLHQH
Trigger: GTGCTGGTGGAGGGGCTTCCAGAAAGACCCTGCGGC...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCATGGGTTTGTGCTGGCTaGAGTCACCAGACCATAGGT +
Preference number: 4 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPWVCAG*SHQTIG
Trigger: ACCTATGGTCTGGTGACTCCAGCCAGCACAAACCCA...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGAAGCAGGACCTGCACTTaGCCCCTGTGCCTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: TSRPLGDSTDTADTRATRSRTCT*PLCLVA
Trigger: AGCAACCAGGCACAGGGGCCAAGTGCAGGTCCTGCT...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GACCCACCCCAGGAACCCTCACCTGCCTTTGGGCAGCCTCCACACCCTGCTCCTAATTCCAGCCCAGCCTaGTTTGAGAACCCAAACTCC +
Preference number: 4 (lower is better)
Translates to: DPPQEPSPAFGQPPHPAPNSSPA*FENPNS
Trigger: GGAGTTTGGGTTCTCAAACCAGGCTGGGCTGGAATT...AGGAGCAGGGTGTGGAGGCTGCCCAAAGGCAGGTGAGGGTTCCTGGGGTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACAGAGTCACAGCCTGTaGCCAGGACAGCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVQSHSL*PGQLCC
Trigger: GCAGCAAAGCTGTCCTGGTCACAGGCTGTGACTCTG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAGGTCTCCAGGCTGGTaGACTCCACCTCCCCGAACG +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYARSPGW*TPPPRT
Trigger: CGTTCGGGGAGGTGGAGTTCACCAGCCTGGAGACCT...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCAGGTCTCCAGGCTGGTaGACTCCACCTCCCCGAACG +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIRSPGW*TPPPRT
Trigger: CGTTCGGGGAGGTGGAGTTCACCAGCCTGGAGACCT...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp ATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCCTACCCCGAACTTGGTaGTGCAGTACGGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: IQDLSGAPTQHHDKVPAVLPRTW*CSTGSG
Trigger: CCCGCTCCCCGTACTGCATCACCAAGTTCGGGGTAG...GACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCGCTGAGTCCAGCCCACCTGGAATGCAAATGTaGAGTATTTCCACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: AAPSPRARRGSDCAESSPPGMQM*SISTAV
Trigger: CACGGCTGTGGAAATACTTCACATTTGCATTCCAGG...TGGGCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCCGGAAACGCGGAGTCTaGTTCGAAGGCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIRKRGV*FEGGHW
Trigger: CCAGTGCCCGCCTTCGAATCAGACTCCGCGTTTCCG...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp TCTTCTCAGACCCCTATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACCCTGCCTCAGCCTCCTaGGTAGCCGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: SSQTPIQDLSGAPTQHHDPASAS*VAGTTG
Trigger: GCCTGTAGTCCCGGCTACTCAGGAGGCTGAGGCAGG...GTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GCTGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGCCTCAGGGAAGAACATaGGGACACTCGACACATGTT +
Preference number: 4 (lower is better)
Translates to: AADSGGLSPSGSTCPQAKPQGRT*GHSTHV
Trigger: AACATGTGTCGAGTGTCCTCATGTTCTTCCCTGAGG...CTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCCCAAGTCACTCACTATaGAAAGAAGTCATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGPSHSL*KEVIPS
Trigger: AGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGG...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAATGCTCGTGCCAAGCCTaGCCCATCGACACCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKECSCQA*PIDTGP
Trigger: GGGGCCGGTGTCGATGGGGCAGGCTTGGCACGAGCA...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCGGGGAGATGCCACAGTaGCCTGCCATGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIGEMPQ*PAMAPL
Trigger: CAGTGGTGCCATGGCAGGGCACTGTGGCATCTCCCC...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCGTAGCCCACTCCGGCTaGCCGGGCTCTTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTVAHSG*PGSSAF
Trigger: GAAGGCAGAAGAGCCCGGGCAGCCGGAGTGGGCTAC...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GACCCACCCCAGGAACCCTCACCTGCCTTTGGGCAGCCTCCACACCCTGCTCCTCCTGTCCTTTTGTACTaGCACAGAGGAGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: DPPQEPSPAFGQPPHPAPPVLLY*HRGVWI
Trigger: AATCCAGACTCCTCTGTGGCAGTACAAAAGGACAGG...AGGAGCAGGGTGTGGAGGCTGCCCAAAGGCAGGTGAGGGTTCCTGGGGTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCAGGCTGGCTGTCACCTaGTCACACAGCCTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGRLAVT*SHSLLA
Trigger: GGCCAAGAGGCTGTGTGAGCAGGTGACAGCCAGCCT...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCTGCACTTGGCCCCTGTaGCTGGTTGCTGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGCTWPL*LVAVWP
Trigger: TGGCCAGACAGCAACCAGGCACAGGGGCCAAGTGCA...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AACCTGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCCAGCAGTGTACCCAGTaGAGTCCACCACGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: NLSQSAWRLEGNSKDHSAQQCTQ*SPPRPH
Trigger: GTGCGGGCGTGGTGGACTGCACTGGGTACACTGCTG...GGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CCCGAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGACCCACCCCAGGAATCTCCGTGCTCCCTCTaGAGGTCTCTGGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PEESNATLLSSLTDPPQESPCSL*RSLESL
Trigger: CAGAGACTCCAGAGACCTGCAGAGGGAGCACGGAGA...TTCCTGGGGTGGGTCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp GAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGACCCACCCCAGGAACCCTGGTGGCCCTTCAAATaGCCCTTGGCGTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: EESNATLLSSLTDPPQEPWWPFK*PLAWSS
Trigger: TGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCA...GGGTTCCTGGGGTGGGTCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGCCGTGACAGGGGTCTaGAGAGGCGGGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEAVTGV*RGGWPA
Trigger: TGCTGGCCACCCGCCTCTCCAGACCCCTGTCACGGC...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR CCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCCCGGCTCCGCCGCACTaGCATAAGTCCGACGGCCAA +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTPAPPH*HKSDGQ
Trigger: TTGGCCGTCGGACTTATGCCAGTGCGGCGGAGCCGG...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTGCCGCAGGGTCTTTCTaGAAGCCCCTCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCAAGSF*KPLHQH
Trigger: GTGCTGGTGGAGGGGCTTCCAGAAAGACCCTGCGGC...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CTTGGTGATGCAGTACGGGGAGCGGGCCGGGTTGGCCATGCGGCCCAGCATGCTTGCCACAGAGGAGTCTaGATTTTAAGTCCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LGDAVRGAGRVGHAAQHACHRGV*ILSPCA
Trigger: TGCACAAGGACTTAAAATCCAGACTCCTCTGTGGCA...AGCATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCCGTACTGCATCACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp CCAGCCTGCAGGGAAGAGTCTGATGCCCCTCGTGACATCACCGAGCTCTCCCGAAGCACTGGAGTTATTTaGAGGGATGGTAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PACREESDAPRDITELSRSTGVI*RDGSLG
Trigger: GCCCAGGCTACCATCCCTCCAAATAACTCCAGTGCT...TCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAGGCGATCCGACCGCCTaGGCCTCCCAAAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPGDPTA*ASQNAG
Trigger: CCCAGCATTTTGGGAGGCCCAGGCGGTCGGATCGCC...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCGCTGAGTCCAGCCCATATTCTGTGCAGGTCTaGGTCATAACCAGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: AAPSPRARRGSDCAESSPYSVQV*VITRCQ
Trigger: TTGGCACCTGGTTATGACCCAGACCTGCACAGAATA...TGGGCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp TTCCGTTCCTGGACTGTCGTCTTCACCGCCTGGTTTTCCATGGAAAGGAAGCCTGCTGGCTGCAGACTCTaGTGGCCTGTCCCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FRSWTVVFTAWFSMERKPAGCRL*WPVPLR
Trigger: CCTGAGGGGGACAGGCCACCAGAGTCTGCAGCCAGC...AGGCTTCCTTTCCATGGAAAACCAGGCGGTGAAGACGACAGTCCAGGAACGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp TCTTCTCAGACCCCTATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACCCACCCTCAGCCTGCTaGCTGCAGACTCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SSQTPIQDLSGAPTQHHDPPSAC*LQTLVA
Trigger: GGCCACCAGAGTCTGCAGCCAGCAGGCTGAGGGTGG...GTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCTTTTCCTGGGAGCCGTaGCAGGGGTCTGGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTFSWEP*QGSGEA
Trigger: CGCCTCTCCAGACCCCTGTCACGGCTCCCAGGAAAA...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACGCTGCTGCAGACATTaGGCTGGACGGTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVRCCRH*AGRFSI
Trigger: GATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCACTACCCCGAACTTGGTaGTGCAGTACGGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPLPRTW*CSTGSG
Trigger: CCCGCTCCCCGTACTGCATCACCAAGTTCGGGGTAG...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCCTACCCCGAACTTGGTaGTGCAGTACGGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTLPRTW*CSTGSG
Trigger: CCCGCTCCCCGTACTGCATCACCAAGTTCGGGGTAG...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGACGGGCTCCACCACGCTaGCCTTCACGCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRRAPPR*PSRPGG
Trigger: ACCCCCTGGGCGTGAAGGTCAGCGTGGTGGAGCCCG...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTAGGCGGAGGTTGCAGTaGGCGGAGATGGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCRRRLQ*AEMVPL
Trigger: CAATGGCACCATCTCCGCTCACTGCAACCTCCGCCT...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCAGGCGGAGGTTGCAGTaGGCGGAGATGGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIRRRLQ*AEMVPL
Trigger: CAATGGCACCATCTCCGCTCACTGCAACCTCCGCCT...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCGACGTTCGGGTCTGCTaGTGGGGACCCAGAGTATGT +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGDVRVC*WGPRVC
Trigger: ACATACTCTGGGTCCCCATCAGCAGACCCGAACGTC...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp CCCGAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGACCCACCCCAGGAAAACAAGACGCAGGCATaGGATGCACGGGACAGATGG +
Preference number: 4 (lower is better)
Translates to: PEESNATLLSSLTDPPQENKTQA*DARDRW
Trigger: CCATCTGTCCCGTGCATCTCATGCCTGCGTCTTGTT...TTCCTGGGGTGGGTCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp CTGTGGCCTCCAGACTCCAGGGCACACATGGTAAGCCAAGAAGCTCTCCGGGGATCTAAAGTTTGGCTCTaGAATCCCCTAGGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: LWPPDSRAHMVSQEALRGSKVWL*NPLGAP
Trigger: CGGCGCACCTAGGGGATTTCAGAGCCAAACTTTAGA...TCCCCGGAGAGCTTCTTGGCTTACCATGTGTGCCCTGGAGTCTGGAGGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp GACCCACCCCAGGAACCCTCACCTGCCTTTGGGCAGCCTCCACACCCTGCTCCTAGGAAGCCTTTTGAATaGAGATGCTTGGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: DPPQEPSPAFGQPPHPAPRKPFE*RCLANE
Trigger: CTCATTGGCCAAGCATCTGCATTCAAAAGGCTTCCT...AGGAGCAGGGTGTGGAGGCTGCCCAAAGGCAGGTGAGGGTTCCTGGGGTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCTGGCACCACTGCTCGTaGCAAGCCTGCCCCATCGAC +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTWHHCS*QACPID
Trigger: GTCGATGGGGCAGGCTTGGCACGAGCAGTGGTGCCA...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AACCTGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCGCCACGCTGAAGCCCTaGAGAACAGGGGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: NLSQSAWRLEGNSKDHSAATLKP*RTGVCV
Trigger: CACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGC...GGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTAGCCCACTCCGGCTaGCCGGGCTCTTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEVAHSG*PGSSAF
Trigger: GAAGGCAGAAGAGCCCGGGCAGCCGGAGTGGGCTAC...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAAGCACTCCTGCGGCCTaGGGCCTCCGCCACCCGGAC +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLSTPAA*GLRHPD
Trigger: GTCCGGGTGGCGGAGGCCGCAGGCCGCAGGAGTGCT...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTAGCACTCCTGCGGCCTaGGGCCTCCGCCACCCGGAC +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSSTPAA*GLRHPD
Trigger: GTCCGGGTGGCGGAGGCCGCAGGCCGCAGGAGTGCT...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAATGTCAGCGCGAGGCCTaGAGGCGGCCCTCCATAGTG +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKECQREA*RRPSIV
Trigger: CACTATGGAGGGCCGCCTGCAGGCCTCGCGCTGACA...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392379.6
ENST00000441275.5
ENST00000617317.2
ENST00000631323.2
CDS-3UTR GCA 90 bp TTCCCCTGCCCAGCCCTGAGGGCTGTGGGAAGTAGGTGCTGGTGGAGGTTGTCTTTCACTAGGAAAACCTaGCAAGGTAACCCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FPCPALRAVGSRCWWRLSFTRKT*QGNPLS
Trigger: GGACAGGGGGTTACCTTGGCAGGTTTTCCTAGTGAA...AGACAACCTCCACCAGCACCTACTTCCCACAGCCCTCAGGGCTGGGCAGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACCCAGTAGACGCACATaGAGCTTCTCTGACGTTCGG +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVPSRRT*SFSDVR
Trigger: CCGAACGTCAGAGAAGCTGCATGTGCGTCTACTGGG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AACCTGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCAGCCAGGGGAGCCTCTaGTTGCTCATGTCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NLSQSAWRLEGNSKDHSASQGSL*LLMSAP
Trigger: AGGAGCCGACATGAGCAAGCAGAGGCTCCCCTGGCT...GGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GCCCCTCAGAATGTGACACTAATATGGCACTGGGACCATCGGCAGCTCCTCCGCCCACCCTGCCTATCCTaGCTGGGTTGCTGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: APQNVTLIWHWDHRQLLRPPCLS*LGCCEN
Trigger: ATTCTCACAGCAACCCAGGCAGGATAGGCAGGGTGG...GCGGAGGAGCTGCCGATGGTCCCAGTGCCATATTAGTGTCACATTCTGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCACCCCGTGCCTCCGAATaGGCCACTCGCAAGTCACCC +
Preference number: 4 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGAPRASE*ATRKSP
Trigger: GGGTGACTTGCGAGTGGCGCATTCGGAGGCACGGGG...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACCGGTGGTTCTTAGCTaGCAGGTGCCTCAGCACTAT +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVPVVLS*QVPQHY
Trigger: ATAGTGCTGAGGCACCTGCCAGCTAAGAACCACCGG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358186.6
CDS-3UTR CCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTGGGAGCGGGCCGGGTTaGCCATGCGGCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSGSGPG*PCGPAC
Trigger: GCATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCC...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTCAGGGGACGTGTCTGTaGAGCCACTGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCQGTCL*SHCCSR
Trigger: CCTACTGCAGCAGTGGCTCCACAGACACGTCCCCTG...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCCAGGGGACGTGTCTGTaGAGCCACTGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIQGTCL*SHCCSR
Trigger: CCTACTGCAGCAGTGGCTCCACAGACACGTCCCCTG...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAATGCAGAGGTACCAGTaGGCACTTGGTGTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVMQRYQ*ALGVCC
Trigger: GCAGCACACACCAAGTGCCCACTGGTACCTCTGCAT...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCCCCCCTGGAGGACAGTaGTGTTTGGCTTCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIPPGGQ*CLASVP
Trigger: TGGGACCGAAGCCAAACACCACTGTCCTCCAGGGGG...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAATCTTCTGCCTTCTCCTaGCACCAGCCTCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKESSAFS*HQPPGP
Trigger: CGGGCCCGGAGGCTGGTGCCAGGAGAAGGCAGAAGA...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACCCAGTTCCTCCCGGTaGTTCCAAAACCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVPSSSR*FQNQMG
Trigger: GCCCATTTGGTTTTGGAACCACCGGGAGGAACTGGG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392378.6
ENST00000612690.3
CDS-3UTR CCA 90 bp CCCGAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGACCCACCCCAGGAAGTGATGTTCACAGGATaGGCAGGAGGAGGAGCTAGC +
Preference number: 4 (lower is better)
Translates to: PEESNATLLSSLTDPPQEVMFTG*AGGGAS
Trigger: GCTAGCTCCTCCTCCTGCCCATCCTGTGAACATCAC...TTCCTGGGGTGGGTCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp TGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGACGTCGTCTTCACCGCCTaGTTTTCCATGGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: CRLWWPVPLRVYLSSGQDVVFTA*FSMERK
Trigger: CTTCCTTTCCATGGAAAACCAGGCGGTGAAGACGAC...GTCTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp TGGTGGACATTAGCATCACACTCTGTGGCCTCCAGACTCCAGGGCACACATGGTCACCGCTTCCGTTCCTaGACTGTCGTCTTCACCGCC +
Preference number: 4 (lower is better)
Translates to: WWTLASHSVASRLQGTHGHRFRS*TVVFTA
Trigger: GGCGGTGAAGACGACAGTCCAGGAACGGAAGCGGTG...ACCATGTGTGCCCTGGAGTCTGGAGGCCACAGAGTGTGATGCTAATGTCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCACCTCCCCGAACGTTaGGATGCCGGCATTGTTAAC +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGHLPER*DAGIVN
Trigger: GTTAACAATGCCGGCATCTCAACGTTCGGGGAGGTG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGAGGTCTCCAGGCTGGTaGACTCCACCTCCCCGAACG +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWRSPGW*TPPPRT
Trigger: CGTTCGGGGAGGTGGAGTTCACCAGCCTGGAGACCT...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTCAGGCAAGTGGGTCATaGTCTGCATTCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCQASGS*SAFAAT
Trigger: GGTGGCTGCGAATGCAGATCATGACCCACTTGCCTG...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAATCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKESTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GAGCTAGCAAGCAAGATGGGGAAGAACCCTTCTTGGTGTGATCTTTCCTCCCTCTCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: ELASKMGKNPSWCDLSSLSTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...GAGGGAGGAAAGATCACACCAAGAAGGGTTCTTCCCCATCTTGCTTGCTAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTATCCACACCCTGTTTGTaGAGGCCCAAGTCACTCACT +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVSTPCL*RPKSLT
Trigger: AGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGA...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTATGTGTGCTGCCCAGATaGGGACACAGAGTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVCVLPR*GHRVSQ
Trigger: CTGACTAACTCTGTGTCCTCATCTGGGCAGCACACA...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCACCATACAGCCAGCTCTaGGTCACTGGCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPPYSQL*VTGCWL
Trigger: CAGCCAGCAGCCAGTGACTCAGAGCTGGCTGTATGG...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCACCAGCAGACAAGCAGTaGGGGTCTAGGTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPPADKQ*GSRCLV
Trigger: CACCAGGCACCTAGACCCTCACTGCTTGTCTGCTGG...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp TGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCTGGTTGCCACGAACTCACTTaGGTAGTTGGGAGGGGCACG +
Preference number: 4 (lower is better)
Translates to: CLRALGGLRGTLKTIQPGCHELT*VVGRGT
Trigger: CGTGCCCCTCCCAACTACTCAAGTGAGTTCGTGGCA...ACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCTGGCGATGGCCTGAATaGTCTCAGGGCTGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGWRWPE*SQGCKG
Trigger: GCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCA...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTTCTTGCCGTAGTCCTTaGGCACGACCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCSCRSP*ARPQAA
Trigger: AGCTGCCTGAGGTCGTGCGCAAGGACTACGGCAAGA...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AGGTGCTCTGTAACAAGGCACTGTCAGGCGCATCTTGCAAGAAGCCCTTGCCCATCTTGCCGTAGTCCTTaGGCACGACCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RCSVTRHCQAHLARSPCPSCRSP*ARPQAA
Trigger: AGCTGCCTGAGGTCGTGCGCAAGGACTACGGCAAGA...TGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGTGCCTTGTTACAGAGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp TGGTGGACATTAGCATCACACTCTGTGGCCTCCAGACTCCAGGGCACACATGGTTCTTGCCGTAGTCCTTaGGCACGACCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: WWTLASHSVASRLQGTHGSCRSP*ARPQAA
Trigger: AGCTGCCTGAGGTCGTGCGCAAGGACTACGGCAAGA...ACCATGTGTGCCCTGGAGTCTGGAGGCCACAGAGTGTGATGCTAATGTCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp CCAGCCTGCAGGGAAGAGTCTGATGCCCCTCGTGACATCACCGAGCTCTCCCGACATCAAAGTACTTCTTaGCGTAGTCCTTGCGCACGA +
Preference number: 4 (lower is better)
Translates to: PACREESDAPRDITELSRHQSTS*RSPCAR
Trigger: TCGTGCGCAAGGACTACGGCAAGAAGTACTTTGATG...TCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGGGGGAGATGCCACAGTaGCCTGCCATGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWGEMPQ*PAMAPL
Trigger: CAGTGGTGCCATGGCAGGGCACTGTGGCATCTCCCC...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCGCCACGCTGAAGCCCTaGAGAACAGGGGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTATLKP*RTGVCV
Trigger: CACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGC...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAGCCACGCTGAAGCCCTaGAGAACAGGGGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPATLKP*RTGVCV
Trigger: CACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGC...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTCTTCTTCCTTGGCACTaGCTGAACCCCGTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCLLPWH*LNPVAH
Trigger: GTGGGCTACGGGGTTCAGGCAGTGCCAAGGAAGAAG...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACTATGGTTATGTAACTaGAGCGGCCACCAAGCGTCC +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVLWLCN*SGHQAS
Trigger: GGACGCTTGGTGGCCGCTGCAGTTACATAACCATAG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp TGGTGGACATTAGCATCACACTCTGTGGCCTCCAGACTCCAGGGCACACATGGTACGATCTCAGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WWTLASHSVASRLQGTHGTISAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATCGT...ACCATGTGTGCCCTGGAGTCTGGAGGCCACAGAGTGTGATGCTAATGTCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp ACGGCTTCAGGCTCCCGAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGATTGCCCAGGCTGGAGTaGAGTGACACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TASGSRGEQRYPPIFTDRLPRLE*SDTISA
Trigger: AGCTGAGATCGTGTCACTGCACTCCAGCCTGGGCAA...TCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTCGGGAGCCTGAAGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp ACTGTCAGGCGCATCTTGCAAGAAGCCCTTGCCCAGCCTCCAACCATCAGGGGAACGAAAACTACGTCCTaGGCCCCGGTAGGTTCTAAG +
Preference number: 4 (lower is better)
Translates to: TVRRILQEALAQPPTIRGTKTTS*APVGSK
Trigger: CTTAGAACCTACCGGGGCGCAGGACGTAGTTTTCGT...TCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCACCCTTGCTCAACAGCTaGCCACCCCGTGCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGAPLLNS*PPRASE
Trigger: TTCGGAGGCACGGGGTGGGCAGCTGTTGAGCAAGGG...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCAGGAAGCTGGCTGTCCTaGTTGCCTGCCTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGAGSWLS*LPACLP
Trigger: AGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCC...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CTTGCGCACGACCTCAGGCAGCTCCTCCCACATCTTCTTGGCGATGGCCTGAATCTGAAATCCCCTAGGTaGGCCGACCTTCCCAAACAA +
Preference number: 4 (lower is better)
Translates to: LAHDLRQLLPHLLGDGLNLKSPR*ADLPKQ
Trigger: TTGTTTGGGAAGGTCGGCGCACCTAGGGGATTTCAG...ATTCAGGCCATCGCCAAGAAGATGTGGGAGGAGCTGCCTGAGGTCGTGCGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCACAACGGGTGTTAGAATaGCCCAGTTCCTCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAQRVLE*PSSSRW
Trigger: CCACCGGGAGGAACTGGGCCATTCTAACACCCGTTG...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACCTCCCACATCTTCTTaGCGATGGCCTGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVPPTSS*RWPECS
Trigger: AGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAATGGCTCCAGGCAAGTaGGTCATGATCTGCATTCGC +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVMAPGK*VMICIR
Trigger: GCGAATGCAGATCATGACCCACTTGCCTGGAGCCAT...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCATGCAGAGGTACCAGTaGGCACTTGGTGTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGMQRYQ*ALGVCC
Trigger: GCAGCACACACCAAGTGCCCACTGGTACCTCTGCAT...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCCCAACATACAGGCCCTaGGCAGTCGCAGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTPTYRP*AVAGMA
Trigger: TGCCATCCCTGCGACTGCCCAGGGCCTGTATGTTGG...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GTACCTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGGGAAGAGTCGAGGACAGTGGTGTTTaGCTTCGGTCCCAACATACA +
Preference number: 4 (lower is better)
Translates to: VPPLEREPISPASLQGRVEDSGV*LRSQHT
Trigger: TGTATGTTGGGACCGAAGCCAAACACCACTGTCCTC...GACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTTTCGAAGGCGGGCACTaGGGACCCTGCCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVFEGGH*GPCPGP
Trigger: CGGCCCGGGGCAGGGTCCCCAGTGCCCGCCTTCGAA...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCGAGGCCCTTCTTCCTTaGCACTGCCTGAACCCCGTA +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIEALLP*HCLNPV
Trigger: TACGGGGTTCAGGCAGTGCCAAGGAAGAAGGGCCTC...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTGAGGCCCTTCTTCCTTaGCACTGCCTGAACCCCGTA +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCEALLP*HCLNPV
Trigger: TACGGGGTTCAGGCAGTGCCAAGGAAGAAGGGCCTC...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCGGTTCCAAAACCAAATaGGCAGGGGGCTCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIGSKTK*AGGSAA
Trigger: TGCAGCGGAGCCCCCTGCCCATTTGGTTTTGGAACC...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392378.6
ENST00000612690.3
CDS-3UTR CCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCCCAGTTCCTCCCGGTaGTTCCAAAACCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGPSSSR*FQNQMG
Trigger: GCCCATTTGGTTTTGGAACCACCGGGAGGAACTGGG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392378.6
ENST00000612690.3
CDS-3UTR CCA 90 bp TGCCTTCGGACACAGCAGCCAGGCCGGAGGCTCGATGGTCTAAAGTTTGGCTCTGATCCGCCCACTCAGTaGGTGCTTCAAAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: CLRTQQPGRRLDGLKFGSDPPTQ*VLQSFI
Trigger: GATGAAGCTTTGAAGCACCCACTGAGTGGGCGGATC...AGAGCCAAACTTTAGACCATCGAGCCTCCGGCCTGGCTGCTGTGTCCGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp GCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCGCTGAGTCCAGCCCAGTCACTTTCCTTCTTTaGGCCTCAGTTATGTCATCT +
Preference number: 4 (lower is better)
Translates to: AAPSPRARRGSDCAESSPVTFLL*ASVMSS
Trigger: AGATGACATAACTGAGGCCCAAAGAAGGAAAGTGAC...TGGGCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp AACCTGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCCCGCTGGAAGGATACTaGGGGCTCCTCCAGCACATT +
Preference number: 4 (lower is better)
Translates to: NLSQSAWRLEGNSKDHSAPLEGY*GLLQHI
Trigger: AATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGG...GGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GCCTGCTTGGTCTTTGAATTCCTAGAGCCTGCTCTCGGGAATGGCCTTGACAGAAGCCTGTCCCAGCCCTaGTCCCTTGCTCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: ACLVFEFLEPALGNGLDRSLSQP*SLAQQL
Trigger: CAGCTGTTGAGCAAGGGACCAGGGCTGGGACAGGCT...TCTGTCAAGGCCATTCCCGAGAGCAGGCTCTAGGAATTCAAAGACCAAGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GTACCTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGGGAAGAGTCGGCTCTCTCGTTTCCTaGCTCTGTGATTTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VPPLEREPISPASLQGRVGSLVS*LCDFGQ
Trigger: TTGCCCAAAATCACAGAGCCAGGAAACGAGAGAGCC...GACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 72 bp AACAAGGCACTGTCAGGCGCATCTTGCAAGAAGCCCTaGCCCAGCCTCCAACCATCAGGGGATGGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: NKALSGASCKKP*PSLQPSGDGFV
Trigger: CACAAACCCATCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGTGCCTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 72 bp GCCCTGAGGGCTGTGGGAAGTAGGTGCTGGTGGAGGTaGTCTTTCTCACTGTTTTCTAGCTCCTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ALRAVGSRCWWR*SFSLFSSSSPL
Trigger: GAGGGGAGAGGAGCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACCTACTTCCCACAGCCCTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCCACCTCCCCGAACGTTaGGATGCCGGCATTGTTAAC +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIHLPER*DAGIVN
Trigger: GTTAACAATGCCGGCATCTCAACGTTCGGGGAGGTG...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCACACCTCCCCGAACGTTaGGATGCCGGCATTGTTAAC +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAHLPER*DAGIVN
Trigger: GTTAACAATGCCGGCATCTCAACGTTCGGGGAGGTG...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCGGGCTCCACCACGCTaGCCTTCACGCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVRAPPR*PSRPGG
Trigger: ACCCCCTGGGCGTGAAGGTCAGCGTGGTGGAGCCCG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGAGGCTGGTGGCAGCGATaGAGTTGCCGGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRGWWQR*SCRAPP
Trigger: TGGTGGAGCCCGGCAACTTCATCGCTGCCACCAGCC...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp TCCCACAGAGGACTCCACCAAGAAAGAACTAATGCATCTTCAGGTCTAGGGTGTGGCTGGTGGCAGCGATaGAGTTGCCGGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SHRGLHQERTNASSGLGCGWWQR*SCRAPP
Trigger: TGGTGGAGCCCGGCAACTTCATCGCTGCCACCAGCC...ACACCCTAGACCTGAAGATGCATTAGTTCTTTCTTGGTGGAGTCCTCTGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCCAGGCAAGTGGGTCATaGTCTGCATTCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTQASGS*SAFAAT
Trigger: GGTGGCTGCGAATGCAGATCATGACCCACTTGCCTG...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCACAGGCAAGTGGGTCATaGTCTGCATTCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPQASGS*SAFAAT
Trigger: GGTGGCTGCGAATGCAGATCATGACCCACTTGCCTG...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp TTCCGTTCCTGGACTGTCGTCTTCACCGCCTGGTTTTCCATGGAAAGGAAGCCTCAGGCAAGTGGGTCATaGTCTGCATTCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: FRSWTVVFTAWFSMERKPQASGS*SAFAAT
Trigger: GGTGGCTGCGAATGCAGATCATGACCCACTTGCCTG...AGGCTTCCTTTCCATGGAAAACCAGGCGGTGAAGACGACAGTCCAGGAACGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp ACGGCTTCAGGCTCCCGAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGATCACCATGTTTGCCCTaGGATTTAGAGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TASGSRGEQRYPPIFTDRSPCLP*DLEASA
Trigger: GGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGA...TCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTCGGGAGCCTGAAGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAACCATACAGCCAGCTCTaGGTCACTGGCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEPYSQL*VTGCWL
Trigger: CAGCCAGCAGCCAGTGACTCAGAGCTGGCTGTATGG...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp TGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCTGGTTCCAGCCTAGGGGACTaGGCAAGACTGTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: CLRALGGLRGTLKTIQPGSSLGD*ARLCLE
Trigger: TTCCAGACACAGTCTTGCTCAGTCCCCTAGGCTGGA...ACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCATCCAGCCTAGGGGACTaGGCAAGACTGTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYASSLGD*ARLCLE
Trigger: TTCCAGACACAGTCTTGCTCAGTCCCCTAGGCTGGA...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCTGTGTAAGCACCACGTaGGGCAAGCAGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTCVSTT*GKQGPQ
Trigger: TTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACA...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAGCATCACTTCTTAATTaGAAAGAGGCCGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVASLLN*KEAEAR
Trigger: CCTCGCCTCGGCCTCTTTTCAATTAAGAAGTGATGC...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCTGAAACCCAAGAAGTaGTCATGCAGACCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGLKPKK*SCRPCL
Trigger: GAGGCAGGGTCTGCATGATCACTTCTTGGGTTTCAG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACGAGAACACTGTTTCTaGAGGGTGCTGCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVREHCF*RVLLAS
Trigger: AGAAGCAAGCAGCACCCTTCAGAAACAGTGTTCTCG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCACAGAGTCACAGCCTGTaGCCAGGACAGCTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAQSHSL*PGQLCH
Trigger: GTGACAAAGCTGTCCTGGTCACAGGCTGTGACTCTG...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441275.5
ENST00000631323.2
CDS-3UTR TCA 90 bp AACCTGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCCACATGCAGCTTCTCTaGCGTTCGGGTCTGCTGATG +
Preference number: 4 (lower is better)
Translates to: NLSQSAWRLEGNSKDHSAHMQLL*RSGLLM
Trigger: CATCAGCAGACCCGAACGTCAGAGAAGCTGCATGTG...GGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCATGGCCAGGCTGGTCTTaGACTCCTGACCTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGAWPGWS*TPDLRR
Trigger: TCGCCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCA...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTCTGCCTGGGTTGCTGTaGGAATCAGGTGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCLPGLL*ESGERK
Trigger: CTTCCTCTCACCTGATTCTCACAGCAACCCAGGCAG...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp GTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCCTCAGGGGAAACCCCCCCTATTCTTAACTTCTaGCCCTTCCAAGGTTGGATC +
Preference number: 4 (lower is better)
Translates to: VPLHSITTRSLQSSGETPPILNF*PFQGWI
Trigger: GATCCAACCTTGGAAGGGTCAGAAGTTAAGAATAGG...GGGGGTTTCCCCTGAGGACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCAC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTTGGCGATGGCCTGAATaGTCTCAGGGCTGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCWRWPE*SQGCKG
Trigger: GCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCA...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCTCTTGCCGTAGTCCTTaGGCACGACCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTSCRSP*ARPQAA
Trigger: AGCTGCCTGAGGTCGTGCGCAAGGACTACGGCAAGA...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCAAAAGGGTTATTTCATaGATCCTCTTTAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGKRVIS*ILFKLQ
Trigger: TTGCAGCTTAAAGAGGATGCATGAAATAACCCTTTT...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAACAGCACCATGGACATaGAGAGGTACCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYATAPWT*RGTSGH
Trigger: GTGCCCACTGGTACCTCTGCATGTCCATGGTGCTGT...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGACTGCCATGGCACCACTaGTCGTGCCAAGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRLPWHH*SCQACP
Trigger: GGGGCAGGCTTGGCACGAGCAGTGGTGCCATGGCAG...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACTGAAGGGTGCTGCTTaGTTCTTTGTTCCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVLKGAA*FFVPGF
Trigger: GAAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANGRGLR*RGLAEA
Trigger: AGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCC...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAGAAGGAGCGGCTCTCTaGCAGCAGACAAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPEGAAL*QQTSSE
Trigger: CTCACTGCTTGTCTGCTGGCAGAGAGCCGCTCCTTC...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAACCTCCCTTTCCAGGCTaGTCCGCGAAACTGCGGACT +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEPPFPG*SAKLRT
Trigger: AGTCCGCAGTTTCGCGGAGCAGCCTGGAAAGGGAGG...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCAGGAGAAGCACATGGTaGTTCTGGGACCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGRRSTW*FWDPAS
Trigger: AGATGCTGGGTCCCAGAAGCACCATGTGCTTCTCCT...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GGTGCTGGTGGAGGTTGTCTTTCTCACTGTTTTCTAGCTCCTCTCCCCTCCTATCCAGGAACCCTCACCTaGCTTTGGGCAGCCTCCACA +
Preference number: 4 (lower is better)
Translates to: GAGGGCLSHCFLAPLPSYPGTLT*LWAAST
Trigger: TGTGGAGGCTGCCCAAAGGCAGGTGAGGGTTCCTGG...ATAGGAGGGGAGAGGAGCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAACCCAGTTCCTCCCGGTaGTTCTTAGCTGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEPSSSR*FLAGRC
Trigger: GCACCTGCCAGCTAAGAACCACCGGGAGGAACTGGG...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358186.6
CDS-3UTR CCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGGGAGCGGGCCGGGTTaGCCATGCGGCCCAGCATGC +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWGSGPG*PCGPAC
Trigger: GCATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GAACTTGGTGATGCAGTACGGGGAGCGGGCCGGGTTGGCCATGCGGCCCAGCATAGTAGGTCTCCATCTTaGCGATCTTTTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: ELGDAVRGAGRVGHAAQHSRSPS*RSFHQS
Trigger: ACTTTGATGAAAAGATCGCCAAGATGGAGACCTACT...ATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCCGTACTGCATCACCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAACAGGGGACGTGTCTGTaGAGCCACTGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEQGTCL*SHCCSR
Trigger: CCTACTGCAGCAGTGGCTCCACAGACACGTCCCCTG...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GGTGCTGGTGGAGGTTGTCTTTCTCACTGTTTTCTAGCTCCTCTCCCCTCCTATCAGGGGACGTGTCTGTaGAGCCACTGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GAGGGCLSHCFLAPLPSYQGTCL*SHCCSR
Trigger: CCTACTGCAGCAGTGGCTCCACAGACACGTCCCCTG...ATAGGAGGGGAGAGGAGCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCAGATCATGTCGGAGATaGCTCCAGGCAAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGRSCRR*LQASGS
Trigger: TGACCCACTTGCCTGGAGCCATCTCCGACATGATCT...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAATGCAGAGGTACCAGTaGGCACTTGGTGTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAMQRYQ*ALGVCC
Trigger: GCAGCACACACCAAGTGCCCACTGGTACCTCTGCAT...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAAGTCACACAGCACCATaGACATGCAGAGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVSHTAP*TCRGTS
Trigger: ACTGGTACCTCTGCATGTCCATGGTGCTGTGTGACT...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCCTGCTTGGTCTTTGAATTCCTAGAGCCTGCTCTCGGGAATGGCCTTGACAGATCACTGGCTGCTGGCTaGCCAGTCACACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: ACLVFEFLEPALGNGLDRSLAAG*PVTQHH
Trigger: ATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGA...TCTGTCAAGGCCATTCCCGAGAGCAGGCTCTAGGAATTCAAAGACCAAGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTATTAGCCCGGCATGGTaGTGGGTGCCTATAACCCCA +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCISPAW*WVPITP
Trigger: TGGGGTTATAGGCACCCACCACCATGCCGGGCTAAT...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCATTAGCCCGGCATGGTaGTGGGTGCCTATAACCCCA +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIISPAW*WVPITP
Trigger: TGGGGTTATAGGCACCCACCACCATGCCGGGCTAAT...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAACCAACATACAGGCCCTaGGCAGTCGCAGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEPTYRP*AVAGMA
Trigger: TGCCATCCCTGCGACTGCCCAGGGCCTGTATGTTGG...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCACCCCCTGGAGGACAGTaGTGTTTGGCTTCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGAPPGGQ*CLASVP
Trigger: TGGGACCGAAGCCAAACACCACTGTCCTCCAGGGGG...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGACTTTTGTTCTGGCCCTaGTCCTGCCGTGGATTTACT +
Preference number: 4 (lower is better)
Translates to: TSRPLGDSTDTADTRATRLLFWP*SCRGFT
Trigger: AGTAAATCCACGGCAGGACCAGGGCCAGAACAAAAG...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGCCTCTTGGCCCCGGGTaGAATGCTAAGCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWPLGPG*NAKHSR
Trigger: CCTGCTGTGCTTAGCATTCCACCCGGGGCCAAGAGG...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp CACACACCAGAGAGGCCTCATATACTGTGGGGTTGTTTCATCTCCCCCAGAGCACCTCATCCGGGAGCCTaGGAGTCAGGCATGATGATG +
Preference number: 4 (lower is better)
Translates to: HTPERPHILWGCFISPRAPHPGA*ESGMMM
Trigger: CATCATCATGCCTGACTCCCAGGCTCCCGGATGAGG...TGCTCTGGGGGAGATGAAACAACCCCACAGTATATGAGGCCTCTCTGGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp TGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGACGCATATATGTTCAGGTaGTTTAGCACCTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: CRLWWPVPLRVYLSSGQDAYMFR*FSTSGK
Trigger: CTTCCCTGAGGTGCTAAACCACCTGAACATATATGC...GTCTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp GTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCCTCAGGGGAAACCCCCCTTCCTCTTGGGACTTaGTTAACCCTGTTGCTATCA +
Preference number: 4 (lower is better)
Translates to: VPLHSITTRSLQSSGETPLPLGT*LTLLLS
Trigger: TGATAGCAACAGGGTTAACCAAGTCCCAAGAGGAAG...GGGGGTTTCCCCTGAGGACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp GGTGCTGGTGGAGGTTGTCTTTCTCACTGTTTTCTAGCTCCTCTCCCCTCCTATCGGGACAGATGGGCCTaGAGCTCAGGCTGTCATTCC +
Preference number: 4 (lower is better)
Translates to: GAGGGCLSHCFLAPLPSYRDRWA*SSGCHS
Trigger: GGAATGACAGCCTGAGCTCCAGGCCCATCTGTCCCG...ATAGGAGGGGAGAGGAGCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp CAGGTACCAGGAAAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTGGCCGATGCACGGGACAGATaGGCCTGGAGCTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QVPGKHVSCFNAVFHLVADARDR*AWSSGC
Trigger: ACAGCCTGAGCTCCAGGCCCATCTGTCCCGTGCATC...GGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTTTCCTGGTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 72 bp GCACATGGTGCTTCTGGGACCCAGCATCTCCTGAGGTaGGTCCCCATTCACTCTCCCTGTCTCTACACATCT +
Preference number: 4 (lower is better)
Translates to: AHGASGTQHLLR*VPIHSPCLYTS
Trigger: AGATGTGTAGAGACAGGGAGAGTGAATGGGGACCAACCTCAGGAGATGCTGGGTCCCAGAAGCACCATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCAGATGCTTGGCCAATaGGAACCCAAATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGQMLGQ*EPKSRV
Trigger: GACTCTGGATTTGGGTTCTCATTGGCCAAGCATCTG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACACAAGGAAGCCTTTTaGATGCAGATGCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVHKEAF*MQMLGQ
Trigger: TTGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CTTGCGCACGACCTCAGGCAGCTCCTCCCACATCTTCTTGGCGATGGCCTGAATCACAAGGAAGCCTTTTaGATGCAGATGCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LAHDLRQLLPHLLGDGLNHKEAF*MQMLGQ
Trigger: TTGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTG...ATTCAGGCCATCGCCAAGAAGATGTGGGAGGAGCTGCCTGAGGTCGTGCGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCACGCTGCTGCAGACATTaGGCTGGACGGTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPRCCRH*AGRFSI
Trigger: GATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCG...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp TCTTCTCAGACCCCTATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACCGCTGCTGCAGACATTaGGCTGGACGGTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: SSQTPIQDLSGAPTQHHDRCCRH*AGRFSI
Trigger: GATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCG...GTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GCAAGCAAGATGGGGAAGAACCCTTCTTGGTGTGATCTTTCCTCCCTCTTGAAAAGGTCTCCAGGCTGGTaGACTCCACCTCCCCGAACG +
Preference number: 4 (lower is better)
Translates to: ASKMGKNPSWCDLSSLLKRSPGW*TPPPRT
Trigger: CGTTCGGGGAGGTGGAGTTCACCAGCCTGGAGACCT...TTTCAAGAGGGAGGAAAGATCACACCAAGAAGGGTTCTTCCCCATCTTGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTCGGGCTCCACCACGCTaGCCTTCACGCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGRAPPR*PSRPGG
Trigger: ACCCCCTGGGCGTGAAGGTCAGCGTGGTGGAGCCCG...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAGGCTGGTGGCAGCGATaGAGTTGCCGGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGGWWQR*SCRAPP
Trigger: TGGTGGAGCCCGGCAACTTCATCGCTGCCACCAGCC...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGCAGGCAAGTGGGTCATaGTCTGCATTCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWQASGS*SAFAAT
Trigger: GGTGGCTGCGAATGCAGATCATGACCCACTTGCCTG...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAACAGGCAAGTGGGTCATaGTCTGCATTCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEQASGS*SAFAAT
Trigger: GGTGGCTGCGAATGCAGATCATGACCCACTTGCCTG...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGATCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRSTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTTCCACACCCTGTTTGTaGAGGCCCAAGTCACTCACT +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCSTPCL*RPKSLT
Trigger: AGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGA...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCATCCACACCCTGTTTGTaGAGGCCCAAGTCACTCACT +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYASTPCL*RPKSLT
Trigger: AGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGA...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCATCACCATGTTTGCCCTaGGATTTAGAGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYASPCLP*DLEASA
Trigger: GGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGA...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCTCCAGCCTAGGGGACTaGGCAAGACTGTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTSSLGD*ARLCLE
Trigger: TTCCAGACACAGTCTTGCTCAGTCCCCTAGGCTGGA...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAATGTGTAAGCACCACGTaGGGCAAGCAGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKECVSTT*GKQGPQ
Trigger: TTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACA...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCCTGAAACCCAAGAAGTaGTCATGCAGACCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVILKPKK*SCRPCL
Trigger: GAGGCAGGGTCTGCATGATCACTTCTTGGGTTTCAG...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp ATGGAATCGAGCCTCTCACTTCCCGGCCCAAGTCATGCCCACGGTTACCCTGTGGTCAAATGGGAGACCTaGGCTCTTAAACCTGACTTG +
Preference number: 4 (lower is better)
Translates to: MESSLSLPGPSHAHGYPVVKWET*ALKPDL
Trigger: CAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGAC...CACAGGGTAACCGTGGGCATGACTTGGGCCGGGAAGTGAGAGGCTCGATTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp TCTTCTCAGACCCCTATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACTGCTGTTGCTGCCCCTaGGAGAGCAGGTGCACAAAA +
Preference number: 4 (lower is better)
Translates to: SSQTPIQDLSGAPTQHHDCCCCP*ESRCTK
Trigger: TTTTGTGCACCTGCTCTCTCAGGGGCAGCAACAGCA...GTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp TGCCTTCGGACACAGCAGCCAGGCCGGAGGCTCGATGGTCTAAAGTTTGGCTCTGGAGCTCACATGATCTaGACCTCAGAAAGGTGGATT +
Preference number: 4 (lower is better)
Translates to: CLRTQQPGRRLDGLKFGSGAHMI*TSERWI
Trigger: AATCCACCTTTCTGAGGTTCAGATCATGTGAGCTCC...AGAGCCAAACTTTAGACCATCGAGCCTCCGGCCTGGCTGCTGTGTCCGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp TGGTGGACATTAGCATCACACTCTGTGGCCTCCAGACTCCAGGGCACACATGGTGGCGTGGAGCTCACATaGTCTGAACCTCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: WWTLASHSVASRLQGTHGGVELT*SEPQKG
Trigger: ACCTTTCTGAGGTTCAGATCATGTGAGCTCCACGCC...ACCATGTGTGCCCTGGAGTCTGGAGGCCACAGAGTGTGATGCTAATGTCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTACATCAAAGTACTTCTTaGCGTAGTCCTTGCGCACGA +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVHQSTS*RSPCAR
Trigger: TCGTGCGCAAGGACTACGGCAAGAAGTACTTTGATG...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCATGTCTGTGGAGCCACTaGTGCAGTAGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYACLWSH*CSRSPS
Trigger: AGATGGAGACCTACTGCAGCAGTGGCTCCACAGACA...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTTGTCTGTGGAGCCACTaGTGCAGTAGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCCLWSH*CSRSPS
Trigger: AGATGGAGACCTACTGCAGCAGTGGCTCCACAGACA...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp TGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGACCCAAGTCACTCACTATaGAAAGAAGTCATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CRLWWPVPLRVYLSSGQDPSHSL*KEVIPS
Trigger: AGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGG...GTCTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCGCACTTGGTGTGTGCTaGCCAGATGAGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTALGVC*PDEDTE
Trigger: CTCTGTGTCCTCATCTGGGCAGCACACACCAAGTGC...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGCTTCTTCCTTGGCACTaGCTGAACCCCGTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWLLPWH*LNPVAH
Trigger: GTGGGCTACGGGGTTCAGGCAGTGCCAAGGAAGAAG...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATAGCACTCCTGCGGCCTaGGGCCTCCGCCACCCGGAC +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHSTPAA*GLRHPD
Trigger: GTCCGGGTGGCGGAGGCCGCAGGCCGCAGGAGTGCT...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRGRGLR*RGLAEA
Trigger: AGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCC...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGTCAGCGCGAGGCCTaGAGGCGGCCCTCCATAGTG +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSCQREA*RRPSIV
Trigger: CACTATGGAGGGCCGCCTGCAGGCCTCGCGCTGACA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392379.6
ENST00000441275.5
ENST00000617317.2
ENST00000631323.2
CDS-3UTR GCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTATGTCAGCGCGAGGCCTaGAGGCGGCCCTCCATAGTG +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLCQREA*RRPSIV
Trigger: CACTATGGAGGGCCGCCTGCAGGCCTCGCGCTGACA...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392379.6
ENST00000441275.5
ENST00000617317.2
ENST00000631323.2
CDS-3UTR GCA 90 bp CACACACCAGAGAGGCCTCATATACTGTGGGGTTGTTTCATCTCCCCCAGAGCAAAGATAACCCCACCCTaGCTATCCTGCCTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: HTPERPHILWGCFISPRAKITPP*LSCLGC
Trigger: GCAACCCAGGCAGGATAGGCAGGGTGGGGTTATCTT...TGCTCTGGGGGAGATGAAACAACCCCACAGTATATGAGGCCTCTCTGGTGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCATCCTTATTTGTAAAATaGAGACAATGGCACCGCCTA +
Preference number: 4 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPSLFVK*RQWHRL
Trigger: TAGGCGGTGCCATTGTCTGCATTTTACAAATAAGGA...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CTCCTCCCACATCTTCTTGGCGATGGCCTGAATGCTCTCAGGGCTGTAAAGGCTCAGGCAACTGTTTCCTaGCCAGGTAGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: LLPHLLGDGLNALRAVKAQATVS*PGRRIA
Trigger: GGCTATCCTTCTACCTGGGCAGGAAACAGTTGCCTG...AGCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp TGGTGGACATTAGCATCACACTCTGTGGCCTCCAGACTCCAGGGCACACATGGTGCTGTGGGAAGTAGGTaGTGGTGGAGGTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: WWTLASHSVASRLQGTHGAVGSR*WWRLSF
Trigger: GAAAGACAACCTCCACCAGCACCTACTTCCCACAGC...ACCATGTGTGCCCTGGAGTCTGGAGGCCACAGAGTGTGATGCTAATGTCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp TGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGACGGAAAACACGTGTCTTaGTTTAATGCAGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CRLWWPVPLRVYLSSGQDGKHVS*FNAVFH
Trigger: GTGGAAGACTGCATTAAAGCAAGACACGTGTTTTCC...GTCTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp GGTGCTGGTGGAGGTTGTCTTTCTCACTGTTTTCTAGCTCCTCTCCCCTCCTATGGTGTGATGACGTGGTaGCTGCAGACCCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GAGGGCLSHCFLAPLPSYGVMTW*LQTPLF
Trigger: GAAGAGAGGGGTCTGCAGGCACCACGTCATCACACC...ATAGGAGGGGAGAGGAGCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCGCCGTGACAGGGGTCTaGAGAGGCGGGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSNGRPELLNLTWPLPNIAVTGV*RGGWPA
Trigger: TGCTGGCCACCCGCCTCTCCAGACCCCTGTCACGGC...GATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTACCGGCTCCGCCGCACTaGCATAAGTCCGACGGCCAA +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLPAPPH*HKSDGQ
Trigger: TTGGCCGTCGGACTTATGCCAGTGCGGCGGAGCCGG...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCTGCAGACATTGAGCTaGACGGTTCTCAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGLQTLS*TVLNRS
Trigger: TGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCACATCTTCTTGGCGATaGCCTGAATGCTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVITSSWR*PECSQG
Trigger: GCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGT...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCACCAGTAGTAGTCCATaGGGTGGTAGCGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTTSSSP*GGSGCR
Trigger: CCTACACCCGCTACCACCCCATGGACTACTACTGGT...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCAGATCATGTCGGAGATaGCTCCAGGCAAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIRSCRR*LQASGS
Trigger: TGACCCACTTGCCTGGAGCCATCTCCGACATGATCT...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAGATCATGTCGGAGATaGCTCCAGGCAAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYARSCRR*LQASGS
Trigger: TGACCCACTTGCCTGGAGCCATCTCCGACATGATCT...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp ATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCAGATCATGTCGGAGATaGCTCCAGGCAAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: IQDLSGAPTQHHDKVPAVRSCRR*LQASGS
Trigger: TGACCCACTTGCCTGGAGCCATCTCCGACATGATCT...GACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCGAGGACAGTGGTGTTTaGCTTCGGTCCCAACATACA +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGEDSGV*LRSQHT
Trigger: TGTATGTTGGGACCGAAGCCAAACACCACTGTCCTC...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGATTCGAAGGCGGGCACTaGGGACCCTGCCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRFEGGH*GPCPGP
Trigger: CGGCCCGGGGCAGGGTCCCCAGTGCCCGCCTTCGAA...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGAGGCCCTTCTTCCTTaGCACTGCCTGAACCCCGTA +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEEALLP*HCLNPV
Trigger: TACGGGGTTCAGGCAGTGCCAAGGAAGAAGGGCCTC...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGACCAAGCGTCCCCCTCTaGGCTCTGGAGGGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGPSVPL*ALEGFG
Trigger: GCCGAAACCCTCCAGAGCCCAGAGGGGGACGCTTGG...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCCTGCTTGGTCTTTGAATTCCTAGAGCCTGCTCTCGGGAATGGCCTTGACAGAGGGATGGGTTTGTGCTaGCTGGAGTCACCAGACCAT +
Preference number: 4 (lower is better)
Translates to: ACLVFEFLEPALGNGLDRGMGLC*LESPDH
Trigger: ATGGTCTGGTGACTCCAGCCAGCACAAACCCATCCC...TCTGTCAAGGCCATTCCCGAGAGCAGGCTCTAGGAATTCAAAGACCAAGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GCCTGCTTGGTCTTTGAATTCCTAGAGCCTGCTCTCGGGAATGGCCTTGACAGAGAGGTTAGATCTGGCTaGACACCCAGCTCTACCCCT +
Preference number: 4 (lower is better)
Translates to: ACLVFEFLEPALGNGLDREVRSG*TPSSTP
Trigger: AGGGGTAGAGCTGGGTGTCCAGCCAGATCTAACCTC...TCTGTCAAGGCCATTCCCGAGAGCAGGCTCTAGGAATTCAAAGACCAAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp ATGCAGTCTTCCACCTGGTGGCCCTTCAAATGCCCCTTGGCGTGGAGCTCACATGTGGGAAGTAGGTGCTaGTGGAGGTTGTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: MQSSTWWPFKCPLAWSSHVGSRC*WRLSFS
Trigger: TGAGAAAGACAACCTCCACCAGCACCTACTTCCCAC...ATGTGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp GCCCAGCATGCTGCTGATATTGACGACGCGGCCTTTGGCCCTTCGGATGAGGGGAGAGCCTCTTTGTTTTaGCATGAAGAGTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: AQHAADIDDAAFGPSDEGRASLF*HEESCS
Trigger: TGAACAGGACTCTTCATGCCAAAACAAAGAGGCTCT...CCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 72 bp ATGCAGTCTTCCACCTGGTGGCCCTTCAAATGCCCCTaGGCGTGGAGCTCACATGATCTGAACCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: MQSSTWWPFKCP*AWSSHDLNLRK
Trigger: CTTTCTGAGGTTCAGATCATGTGAGCTCCACGCCAAGGGGCATTTGAAGGGCCACCAGGTGGAAGACTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTTTTCCTGGGAGCCGTaGCAGGGGTCTGGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSFSWEP*QGSGEA
Trigger: CGCCTCTCCAGACCCCTGTCACGGCTCCCAGGAAAA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR TCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCACAGATGCTTGGCCAATaGGAACCCAAATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAQMLGQ*EPKSRV
Trigger: GACTCTGGATTTGGGTTCTCATTGGCCAAGCATCTG...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAACGCTGCTGCAGACATTaGGCTGGACGGTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKERCCRH*AGRFSI
Trigger: GATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCG...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTACTACCCCGAACTTGGTaGTGCAGTACGGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLLPRTW*CSTGSG
Trigger: CCCGCTCCCCGTACTGCATCACCAAGTTCGGGGTAG...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTCTACCCCGAACTTGGTaGTGCAGTACGGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSLPRTW*CSTGSG
Trigger: CCCGCTCCCCGTACTGCATCACCAAGTTCGGGGTAG...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCGGGCTCCACCACGCTaGCCTTCACGCCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHRAPPR*PSRPGG
Trigger: ACCCCCTGGGCGTGAAGGTCAGCGTGGTGGAGCCCG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGGCTGGTGGCAGCGATaGAGTTGCCGGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVGWWQR*SCRAPP
Trigger: TGGTGGAGCCCGGCAACTTCATCGCTGCCACCAGCC...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCTCCACACCCTGTTTGTaGAGGCCCAAGTCACTCACT +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTSTPCL*RPKSLT
Trigger: AGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGA...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCTCACCATGTTTGCCCTaGGATTTAGAGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTSPCLP*DLEASA
Trigger: GGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGA...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAATCCAGCCTAGGGGACTaGGCAAGACTGTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKESSLGD*ARLCLE
Trigger: TTCCAGACACAGTCTTGCTCAGTCCCCTAGGCTGGA...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CTTGACAGAGCCGACTTCCCGCTGGAAGGATACTGGGGGCTCCTCCAGCACATTCACACAAGTCTATCCTaGGTCCTAAAAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: LDRADFPLEGYWGLLQHIHTSLS*VLKEDG
Trigger: TCCATCCTCTTTTAGGACTCAGGATAGACTTGTGTG...AATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCGCATCACTTCTTAATTaGAAAGAGGCCGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIASLLN*KEAEAR
Trigger: CCTCGCCTCGGCCTCTTTTCAATTAAGAAGTGATGC...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCCGAGAACACTGTTTCTaGAGGGTGCTGCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIREHCF*RVLLAS
Trigger: AGAAGCAAGCAGCACCCTTCAGAAACAGTGTTCTCG...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGGCCCGGGAGGCAGCTaGATTGCCCATTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVGPGGS*IAHCEA
Trigger: GGCCTCACAATGGGCAATTCAGCTGCCTCCCGGGCC...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGGCTGTGAGAATCAGGTaGGAGGAAGCTGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWAVRIR*EEAVVA
Trigger: AGCCACCACAGCTTCCTCTCACCTGATTCTCACAGC...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp AACCTGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCTCGCTGTTACGTAACTaGGGACTTCTTCCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: NLSQSAWRLEGNSKDHSASLLRN*GLLPSL
Trigger: TAGGGAGGGAAGAAGTCCTCAGTTACGTAACAGCGA...GGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp ACGGCTTCAGGCTCCCGAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGAAGGCAGCCAATGAGCTaGTTCTGGCAGAAAGGTTTT +
Preference number: 4 (lower is better)
Translates to: TASGSRGEQRYPPIFTDRRQPMS*FWQKGF
Trigger: AAAACCTTTCTGCCAGAATCAGCTCATTGGCTGCCT...TCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTCGGGAGCCTGAAGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGACCCACCCCAGGAACCCCTCTTTGTTTTGGCATaGAGAGTCCTGTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: EESNATLLSSLTDPPQEPLFVLA*RVLFSL
Trigger: GAGACTGAACAGGACTCTTCATGCCAAAACAAAGAG...GGGTTCCTGGGGTGGGTCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp ATGGAATCGAGCCTCTCACTTCCCGGCCCAAGTCATGCCCACGGTTACCCTGTGAGGAAGCCTTTTGAATaGAGATGCTTGGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: MESSLSLPGPSHAHGYPVRKPFE*RCLANE
Trigger: CTCATTGGCCAAGCATCTGCATTCAAAAGGCTTCCT...CACAGGGTAACCGTGGGCATGACTTGGGCCGGGAAGTGAGAGGCTCGATTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTCCAAAGGTTCACTTCTaGCACCTGCTTGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCPKVHF*HLLVGL
Trigger: GAGACCTACAAGCAGGTGGCAGAAGTGAACCTTTGG...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCTGTCTGTGGAGCCACTaGTGCAGTAGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTCLWSH*CSRSPS
Trigger: AGATGGAGACCTACTGCAGCAGTGGCTCCACAGACA...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGACAGCACCATGGACATaGAGAGGTACCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWTAPWT*RGTSGH
Trigger: GTGCCCACTGGTACCTCTGCATGTCCATGGTGCTGT...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTGCTCGTGCCAAGCCTaGCCCATCGACACCGGCCCC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGCSCQA*PIDTGP
Trigger: GGGGCCGGTGTCGATGGGGCAGGCTTGGCACGAGCA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTATGGCACCACTGCTCGTaGCAAGCCTGCCCCATCGAC +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLWHHCS*QACPID
Trigger: GTCGATGGGGCAGGCTTGGCACGAGCAGTGGTGCCA...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGGCACCACTGCTCGTaGCAAGCCTGCCCCATCGAC +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSWHHCS*QACPID
Trigger: GTCGATGGGGCAGGCTTGGCACGAGCAGTGGTGCCA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGATGGCACCACTGCTCGTaGCAAGCCTGCCCCATCGAC +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGWHHCS*QACPID
Trigger: GTCGATGGGGCAGGCTTGGCACGAGCAGTGGTGCCA...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAACTGTTTCTGAAGGGTaGTGCTTGCTTCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVTVSEG*CLLLCS
Trigger: GGAACAAAGAAGCAAGCAGCACCCTTCAGAAACAGT...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCCTATGGTTATGTAACTaGAGCGGCCACCAAGCGTCC +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTLWLCN*SGHQAS
Trigger: GGACGCTTGGTGGCCGCTGCAGTTACATAACCATAG...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCACCTCAAAGTAGGAACTaGAGGGTGACTCTGCATCAG +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAPQSRN*RVTLHQ
Trigger: CTGATGCAGAGTCACCCTGCAGTTCCTACTTTGAGG...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392379.6
ENST00000441275.5
ENST00000617317.2
ENST00000631323.2
CDS-3UTR GCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAGGGCGTCAGGACATTTaGAGCGTCACAAAAGATCCT +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAGRQDI*SVTKDP
Trigger: AGGATCTTTTGTGACGCTGCAAATGTCCTGACGCCC...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441275.5
ENST00000631323.2
CDS-3UTR GCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAGCCTGCCTGCCTGCCTaGCGCTCCTTCGCCACGTGC +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRACLPA*RSFATC
Trigger: GCACGTGGCGAAGGAGCGGCAGGCAGGCAGGCAGGC...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CTGTGGCCTCCAGACTCCAGGGCACACATGGTAAGCCAAGAAGCTCTCCGGGGACTGTGTTGGTGCGTGTaGAACTGGCTTATTGATAAA +
Preference number: 4 (lower is better)
Translates to: LWPPDSRAHMVSQEALRGLCWCV*NWLIDK
Trigger: TTTATCAATAAGCCAGTTGCACACGCACCAACACAG...TCCCCGGAGAGCTTCTTGGCTTACCATGTGTGCCCTGGAGTCTGGAGGCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp TTCCGTTCCTGGACTGTCGTCTTCACCGCCTGGTTTTCCATGGAAAGGAAGCCTACAAGACCTCTCTGGTaGCCCTACACAGCATCACGA +
Preference number: 4 (lower is better)
Translates to: FRSWTVVFTAWFSMERKPTRPLW*PYTASR
Trigger: TCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGT...AGGCTTCCTTTCCATGGAAAACCAGGCGGTGAAGACGACAGTCCAGGAACGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp GCAAGCAAGATGGGGAAGAACCCTTCTTGGTGTGATCTTTCCTCCCTCTTGAAAGACGCAGGCATGAGATaGACGGGACAGATGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ASKMGKNPSWCDLSSLLKDAGMR*TGQMGL
Trigger: CAGGCCCATCTGTCCCGTGCATCTCATGCCTGCGTC...TTTCAAGAGGGAGGAAAGATCACACCAAGAAGGGTTCTTCCCCATCTTGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCCGGCTCCGCCGCACTaGCATAAGTCCGACGGCCAA +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVPAPPH*HKSDGQ
Trigger: TTGGCCGTCGGACTTATGCCAGTGCGGCGGAGCCGG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCACTGCAGACATTGAGCTaGACGGTTCTCAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYALQTLS*TVLNRS
Trigger: TGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAG...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCACATCTTCTTGGCGATaGCCTGAATGCTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTTSSWR*PECSQG
Trigger: GCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGT...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGACAGGGGACGTGTCTGTaGAGCCACTGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRQGTCL*SHCCSR
Trigger: CCTACTGCAGCAGTGGCTCCACAGACACGTCCCCTG...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGACCAGTAGTAGTCCATaGGGTGGTAGCGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWTSSSP*GGSGCR
Trigger: CCTACACCCGCTACCACCCCATGGACTACTACTGGT...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAATGGCTCCAGGCAAGTaGGTCATGATCTGCATTCGC +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPMAPGK*VMICIR
Trigger: GCGAATGCAGATCATGACCCACTTGCCTGGAGCCAT...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAAGATCATGTCGGAGATaGCTCCAGGCAAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPRSCRR*LQASGS
Trigger: TGACCCACTTGCCTGGAGCCATCTCCGACATGATCT...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTGTATTTCCACAGCCGTaGCAGGAACACATAACTGGC +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCVFPQP*QEHITG
Trigger: GCCAGTTATGTGTTCCTGCCACGGCTGTGGAAATAC...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CTTGACAGAGCCGACTTCCCGCTGGAAGGATACTGGGGGCTCCTCCAGCACATTAGATTCTCGGGCAAATaGATCCAAAACAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LDRADFPLEGYWGLLQHIRFSGK*IQNSPG
Trigger: TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCT...AATGTGCTGGAGGAGCCCCCAGTATCCTTCCAGCGGGAAGTCGGCTCTGTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCATAACCCCAGCTACTTaGAAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIITPAT*KAEAGE
Trigger: TTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGGTTAT...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AACCTGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCATAACCCCAGCTACTTaGAAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: NLSQSAWRLEGNSKDHSAITPAT*KAEAGE
Trigger: TTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGGTTAT...GGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGACCAACATACAGGCCCTaGGCAGTCGCAGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRPTYRP*AVAGMA
Trigger: TGCCATCCCTGCGACTGCCCAGGGCCTGTATGTTGG...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAGAGGACAGTGGTGTTTaGCTTCGGTCCCAACATACA +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAEDSGV*LRSQHT
Trigger: TGTATGTTGGGACCGAAGCCAAACACCACTGTCCTC...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCCAAGCGTCCCCCTCTaGGCTCTGGAGGGTTTCGGC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVPSVPL*ALEGFG
Trigger: GCCGAAACCCTCCAGAGCCCAGAGGGGGACGCTTGG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGCCGCAGGGTCTTTCTaGAAGCCCCTCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLAAGSF*KPLHQH
Trigger: GTGCTGGTGGAGGGGCTTCCAGAAAGACCCTGCGGC...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GAGCTAGCAAGCAAGATGGGGAAGAACCCTTCTTGGTGTGATCTTTCCTCCCTCCCCAGTTCCTCCCGGTaGTTCCAAAACCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: ELASKMGKNPSWCDLSSLPSSSR*FQNQMG
Trigger: GCCCATTTGGTTTTGGAACCACCGGGAGGAACTGGG...GAGGGAGGAAAGATCACACCAAGAAGGGTTCTTCCCCATCTTGCTTGCTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCACCAACCATCAGGGGATaGGTTTGTGCTGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGAPTIRG*VCAGWS
Trigger: ACTCCAGCCAGCACAAACCCATCCCCTGATGGTTGG...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GGTGCTGGTGGAGGTTGTCTTTCTCACTGTTTTCTAGCTCCTCTCCCCTCCTATCCGCCTGGTTTTCCATaGAAAGGAAGCCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GAGGGCLSHCFLAPLPSYPPGFP*KGSLPS
Trigger: ACTGGGGAGGCTTCCTTTCCATGGAAAACCAGGCGG...ATAGGAGGGGAGAGGAGCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 72 bp TCCACCACTTTCTCCACCTCTTCGCTGCTGCAGACATaGAGCTGGACGGTTCTCAATCGGTCACTGTTTAGG +
Preference number: 4 (lower is better)
Translates to: STTFSTSSLLQT*SWTVLNRSLFR
Trigger: CCTAAACAGTGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGAAGAGGTGGAGAAAGTGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGACAGAGTCACAGCCTGTaGCCAGGACAGCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRQSHSL*PGQLCC
Trigger: GCAGCAAAGCTGTCCTGGTCACAGGCTGTGACTCTG...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp ACCAATTTGCCCCCAGTTATTCAGAGAAATCTTTCCAACCACCCTCAGCCTGCTCAGAGTCACAGCCTGTaGCCAGGACAGCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TNLPPVIQRNLSNHPQPAQSHSL*PGQLCC
Trigger: GCAGCAAAGCTGTCCTGGTCACAGGCTGTGACTCTG...AGCAGGCTGAGGGTGGTTGGAAAGATTTCTCTGAATAACTGGGGGCAAATTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCTACCCCGAACTTGGTaGTGCAGTACGGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVLPRTW*CSTGSG
Trigger: CCCGCTCCCCGTACTGCATCACCAAGTTCGGGGTAG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGGCTGGTGGCAGCGATaGAGTTGCCGGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWGWWQR*SCRAPP
Trigger: TGGTGGAGCCCGGCAACTTCATCGCTGCCACCAGCC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTTCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVSTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTATGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CAGGTACCAGGAAAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTGGCCTCCACACCCTGTTTGTaGAGGCCCAAGTCACTCACT +
Preference number: 4 (lower is better)
Translates to: QVPGKHVSCFNAVFHLVASTPCL*RPKSLT
Trigger: AGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGA...GGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTTTCCTGGTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAATCACCATGTTTGCCCTaGGATTTAGAGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKESPCLP*DLEASA
Trigger: GGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGA...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GTACCTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGGGAAGAGTCTGTCCTTTTCATTCATaGGACTGGCTTAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: VPPLEREPISPASLQGRVCPFHS*DWLKDQ
Trigger: TTGATCCTTAAGCCAGTCTCATGAATGAAAAGGACA...GACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp CTGTGGCCTCCAGACTCCAGGGCACACATGGTAAGCCAAGAAGCTCTCCGGGGATGTCCTTTTCATTCATaGGACTGGCTTAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: LWPPDSRAHMVSQEALRGCPFHS*DWLKDQ
Trigger: TTGATCCTTAAGCCAGTCTCATGAATGAAAAGGACA...TCCCCGGAGAGCTTCTTGGCTTACCATGTGTGCCCTGGAGTCTGGAGGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCCCTGGAATGCAAATGTaGAGTATTTCCACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIPGMQM*SISTAV
Trigger: CACGGCTGTGGAAATACTTCACATTTGCATTCCAGG...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCACCTGGAATGCAAATGTaGAGTATTTCCACAGCCGTG +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAPGMQM*SISTAV
Trigger: CACGGCTGTGGAAATACTTCACATTTGCATTCCAGG...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GGACGACCGTGCCTAGACAGGGCACAACGAAGAGATTCAAGTAATAAAGGGGCATGTGTGCTGCCCAGATaGGGACACAGAGTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: GRPCLDRAQRRDSSNKGACVLPR*GHRVSQ
Trigger: CTGACTAACTCTGTGTCCTCATCTGGGCAGCACACA...TGCCCCTTTATTACTTGAATCTCTTCGTTGTGCCCTGTCTAGGCACGGTCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTACCATACAGCCAGCTCTaGGTCACTGGCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLPYSQL*VTGCWL
Trigger: CAGCCAGCAGCCAGTGACTCAGAGCTGGCTGTATGG...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTAGGCGGAGGTTGCAGTaGGCGGAGATGGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSRRRLQ*AEMVPL
Trigger: CAATGGCACCATCTCCGCTCACTGCAACCTCCGCCT...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp ACTGTCAGGCGCATCTTGCAAGAAGCCCTTGCCCAGCCTCCAACCATCAGGGGATGGCAGCTTTCAAACTaGAACCCAAGAAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: TVRRILQEALAQPPTIRGWQLSN*NPRSDH
Trigger: ATGATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCA...TCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGCCTTCCTACTTACTCTaGCAAGAAGGAGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWPSYLL*QEGAAL
Trigger: GAGAGCCGCTCCTTCTTGTCAGAGTAAGTAGGAAGG...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp GGCTCCATCTATTTTCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACAGACCTAGCAGCTTGTaGCAGGCGGGGCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSIYFPLINFSTDTNSPNRPSSL*QAGPGW
Trigger: CCAGCCTGGCCCCGCCTGTCACAAGCTGCTAGGTCT...GTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGAAAATAGATGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTATCTCGGGAATGGCCTTaGCAGAGCCGACTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLSREWP*QSRLPA
Trigger: AGCGGGAAGTCGGCTCTGTCAAGGCCATTCCCGAGA...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp ATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCGAACCCTTCTTGGTGTaGTCTTTCCTCCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: IQDLSGAPTQHHDKVPAVEPFLV*SFLPLE
Trigger: TTCAAGAGGGAGGAAAGATCACACCAAGAAGGGTTC...GACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCCCAAAGGTTCACTTCTaGCACCTGCTTGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTPKVHF*HLLVGL
Trigger: GAGACCTACAAGCAGGTGGCAGAAGTGAACCTTTGG...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCACATCAAAGTACTTCTTaGCGTAGTCCTTGCGCACGA +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAHQSTS*RSPCAR
Trigger: TCGTGCGCAAGGACTACGGCAAGAAGTACTTTGATG...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp ACTGTCAGGCGCATCTTGCAAGAAGCCCTTGCCCAGCCTCCAACCATCAGGGGACCAAGTCACTCACTATaGAAAGAAGTCATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TVRRILQEALAQPPTIRGPSHSL*KEVIPS
Trigger: AGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGG...TCCCCTGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGATGCTCGTGCCAAGCCTaGCCCATCGACACCGGCCCC +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRCSCQA*PIDTGP
Trigger: GGGGCCGGTGTCGATGGGGCAGGCTTGGCACGAGCA...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATTGCTCGTGCCAAGCCTaGCCCATCGACACCGGCCCC +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHCSCQA*PIDTGP
Trigger: GGGGCCGGTGTCGATGGGGCAGGCTTGGCACGAGCA...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCGGGGAGATGCCACAGTaGCCTGCCATGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: LSNGRPELLNLTWPLPNIGEMPQ*PAMAPL
Trigger: CAGTGGTGCCATGGCAGGGCACTGTGGCATCTCCCC...GATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCACTGTTTCTGAAGGGTaGTGCTTGCTTCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGTVSEG*CLLLCS
Trigger: GGAACAAAGAAGCAAGCAGCACCCTTCAGAAACAGT...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGCTATGGTTATGTAACTaGAGCGGCCACCAAGCGTCC +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWLWLCN*SGHQAS
Trigger: GGACGCTTGGTGGCCGCTGCAGTTACATAACCATAG...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGTGTCAGCGCGAGGCCTaGAGGCGGCCCTCCATAGTG +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWCQREA*RRPSIV
Trigger: CACTATGGAGGGCCGCCTGCAGGCCTCGCGCTGACA...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392379.6
ENST00000441275.5
ENST00000617317.2
ENST00000631323.2
CDS-3UTR GCA 90 bp CACACACCAGAGAGGCCTCATATACTGTGGGGTTGTTTCATCTCCCCCAGAGCAGCTAAGCACAGCAGGTaGTCTGTAACAAGGCACTGT +
Preference number: 4 (lower is better)
Translates to: HTPERPHILWGCFISPRAAKHSR*SVTRHC
Trigger: ACAGTGCCTTGTTACAGAGCACCTGCTGTGCTTAGC...TGCTCTGGGGGAGATGAAACAACCCCACAGTATATGAGGCCTCTCTGGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGACTTTGTCAGACCCCCTaGCATGGGTGGCAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGLCQTP*HGWQGC
Trigger: GCACCCTTGCCACCCATGGCAGGGGGTCTGACAAAG...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGGAGAGGTAGCAGCTaGCGTCCGGCACAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHGRGSS*RPAQGC
Trigger: GCAGCCCTGTGCCGGACGGCAGCTGCTACCTCTCCC...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGCCGTGACAGGGGTCTaGAGAGGCGGGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHAVTGV*RGGWPA
Trigger: TGCTGGCCACCCGCCTCTCCAGACCCCTGTCACGGC...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCCGGCTCCGCCGCACTaGCATAAGTCCGACGGCCAA +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWPAPPH*HKSDGQ
Trigger: TTGGCCGTCGGACTTATGCCAGTGCGGCGGAGCCGG...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCCTGCAGACATTGAGCTaGACGGTTCTCAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTLQTLS*TVLNRS
Trigger: TGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAG...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp CACACACCAGAGAGGCCTCATATACTGTGGGGTTGTTTCATCTCCCCCAGAGCACTGCAGACATTGAGCTaGACGGTTCTCAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: HTPERPHILWGCFISPRALQTLS*TVLNRS
Trigger: TGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAG...TGCTCTGGGGGAGATGAAACAACCCCACAGTATATGAGGCCTCTCTGGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp TCTTCTCAGACCCCTATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACCTGCAGACATTGAGCTaGACGGTTCTCAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: SSQTPIQDLSGAPTQHHDLQTLS*TVLNRS
Trigger: TGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAG...GTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp GGTGCTGGTGGAGGTTGTCTTTCTCACTGTTTTCTAGCTCCTCTCCCCTCCTATCCTCCCACATCTTCTTaGCGATGGCCTGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: GAGGGCLSHCFLAPLPSYPPTSS*RWPECS
Trigger: AGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGG...ATAGGAGGGGAGAGGAGCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTACAGGGGACGTGTCTGTaGAGCCACTGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLQGTCL*SHCCSR
Trigger: CCTACTGCAGCAGTGGCTCCACAGACACGTCCCCTG...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGCAAGAGTTGACTATATaGGTTCCTCCCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWQELTI*VPPSPP
Trigger: GGGAGGGGAGGGAGGAACCCATATAGTCAACTCTTG...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCAGTCACACAGCACCATaGACATGCAGAGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTSHTAP*TCRGTS
Trigger: ACTGGTACCTCTGCATGTCCATGGTGCTGTGTGACT...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAATAACCCCAGCTACTTaGAAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPITPAT*KAEAGE
Trigger: TTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGGTTAT...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTCACAGTGCCCTGCCATaGCACCACTGCTCGTGCCAA +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSHSALP*HHCSCQ
Trigger: TTGGCACGAGCAGTGGTGCCATGGCAGGGCACTGTG...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp ACATCCAGGCCCCTGGGAGATAGCACAGACACTGCAGACACACGTGCGACGAGAAGACCCTGCCTCAAGTaGCATCACTTCTTAATTGAA +
Preference number: 4 (lower is better)
Translates to: TSRPLGDSTDTADTRATRRPCLK*HHFLIE
Trigger: TTCAATTAAGAAGTGATGCCACTTGAGGCAGGGTCT...TCTCGTCGCACGTGTGTCTGCAGTGTCTGTGCTATCTCCCAGGGGCCTGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAGAGGACAGTGGTGTTTaGCTTCGGTCCCAACATACA +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPEDSGV*LRSQHT
Trigger: TGTATGTTGGGACCGAAGCCAAACACCACTGTCCTC...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTACCCCCTGGAGGACAGTaGTGTTTGGCTTCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLPPGGQ*CLASVP
Trigger: TGGGACCGAAGCCAAACACCACTGTCCTCCAGGGGG...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTCTTCTGCCTTCTCCTaGCACCAGCCTCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGSSAFS*HQPPGP
Trigger: CGGGCCCGGAGGCTGGTGCCAGGAGAAGGCAGAAGA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGTCTTCTGCCTTCTCCTaGCACCAGCCTCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWSSAFS*HQPPGP
Trigger: CGGGCCCGGAGGCTGGTGCCAGGAGAAGGCAGAAGA...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGTCCCCCTCTGGGCTCTaGAGGGTTTCGGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWSPSGL*RVSALP
Trigger: AGGCAGGGCCGAAACCCTCCAGAGCCCAGAGGGGGA...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTCCCCCTCTGGGCTCTaGAGGGTTTCGGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGSPSGL*RVSALP
Trigger: AGGCAGGGCCGAAACCCTCCAGAGCCCAGAGGGGGA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GTACCTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGGGAAGAGTCGGGCTTTTCAATCACTaGAAACGATTAAAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VPPLEREPISPASLQGRVGLFNH*KRLKAR
Trigger: TCTGGCTTTTAATCGTTTCCAGTGATTGAAAAGCCC...GACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp TCTTCTCAGACCCCTATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACTTAGTTCCGCTGTGTTaGTGCGTGTGCAACTGGCTT +
Preference number: 4 (lower is better)
Translates to: SSQTPIQDLSGAPTQHHDLVPLC*CVCNWL
Trigger: AAGCCAGTTGCACACGCACCAACACAGCGGAACTAA...GTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp ATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCTATACAAGACCTCTCTaGTGCCCCTACACAGCATCA +
Preference number: 4 (lower is better)
Translates to: IQDLSGAPTQHHDKVPAVYTRPL*CPYTAS
Trigger: TGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATA...GACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp TCTTCTCAGACCCCTATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACAAATGCCCCTTGGCGTaGAGCTCACATGATCTGAAC +
Preference number: 4 (lower is better)
Translates to: SSQTPIQDLSGAPTQHHDKCPLA*SSHDLN
Trigger: GTTCAGATCATGTGAGCTCCACGCCAAGGGGCATTT...GTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp CAGGTACCAGGAAAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTGGCCTTTGAAAAGGCACTGTaGCGTGGCCCGCTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: QVPGKHVSCFNAVFHLVAFEKAL*RGPLSL
Trigger: GAGACTTAGCGGGCCACGCCACAGTGCCTTTTCAAA...GGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTTTCCTGGTACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTTTTCCTGGGAGCCGTaGCAGGGGTCTGGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGFSWEP*QGSGEA
Trigger: CGCCTCTCCAGACCCCTGTCACGGCTCCCAGGAAAA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR TCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTACAGAGTCACAGCCTGTaGCCAGGACAGCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLQSHSL*PGQLCC
Trigger: GCAGCAAAGCTGTCCTGGTCACAGGCTGTGACTCTG...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR TCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAACAGATGCTTGGCCAATaGGAACCCAAATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEQMLGQ*EPKSRV
Trigger: GACTCTGGATTTGGGTTCTCATTGGCCAAGCATCTG...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGSTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGATGTGTAAGCACCACGTaGGGCAAGCAGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGCVSTT*GKQGPQ
Trigger: TTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACA...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCTGGCAGCTTTCAAACTaGAACCCAAGAAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: KASYGYVTAAATKRPPLGWQLSN*NPRSDH
Trigger: ATGATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCA...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCGGAAACGCGGAGTCTaGTTCGAAGGCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWRKRGV*FEGGHW
Trigger: CCAGTGCCCGCCTTCGAATCAGACTCCGCGTTTCCG...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATCGGAAACGCGGAGTCTaGTTCGAAGGCGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANRKRGV*FEGGHW
Trigger: CCAGTGCCCGCCTTCGAATCAGACTCCGCGTTTCCG...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGCCCGGGAGGCAGCTaGATTGCCCATTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHGPGGS*IAHCEA
Trigger: GGCCTCACAATGGGCAATTCAGCTGCCTCCCGGGCC...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AACCTGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCGCCAAAAACATTAAGTaGGGTGGTAGATTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: NLSQSAWRLEGNSKDHSAAKNIK*GGRFRL
Trigger: GAGCCGAAATCTACCACCTCACTTAATGTTTTTGGC...GGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp TCCCACAGAGGACTCCACCAAGAAAGAACTAATGCATCTTCAGGTCTAGGGTGTCAGCCCAGCCTGGTTTaGGAACCCAAACTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SHRGLHQERTNASSGLGCQPSLV*EPKLPN
Trigger: GTTTGGGAGTTTGGGTTCTCAAACCAGGCTGGGCTG...ACACCCTAGACCTGAAGATGCATTAGTTCTTTCTTGGTGGAGTCCTCTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTCCTTTTGAATGCAGATaGTTGGCCAATGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCPFECR*LANENP
Trigger: TGGGTTCTCATTGGCCAAGCATCTGCATTCAAAAGG...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGATGGCGATGGCCTGAATaGTCTCAGGGCTGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRWRWPE*SQGCKG
Trigger: GCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCA...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGATGCCACAGTGCCCTaGCATGGCACCACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVDATVP*HGTTAR
Trigger: ACGAGCAGTGGTGCCATGGCAGGGCACTGTGGCATC...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGGGGAGATGCCACAGTaGCCTGCCATGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWGEMPQ*PAMAPL
Trigger: CAGTGGTGCCATGGCAGGGCACTGTGGCATCTCCCC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAACCTCAAAGTAGGAACTaGAGGGTGACTCTGCATCAG +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEPQSRN*RVTLHQ
Trigger: CTGATGCAGAGTCACCCTGCAGTTCCTACTTTGAGG...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392379.6
ENST00000441275.5
ENST00000617317.2
ENST00000631323.2
CDS-3UTR GCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGGGCGTCAGGACATTTaGAGCGTCACAAAAGATCCT +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEGRQDI*SVTKDP
Trigger: AGGATCTTTTGTGACGCTGCAAATGTCCTGACGCCC...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441275.5
ENST00000631323.2
CDS-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTAAAGCCAGAACAACCTaGACAGGCCGGCCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSKARTT*TGRPSS
Trigger: ACTGCTGGGCCGGCCTGTGCAGGTTGTTCTGGCTTT...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTAGGCGAGGTTCTGACTaGGCTGAGTCCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVRRGSD*AESSPA
Trigger: AGCTGGGCTGGACTCAGCGCAGTCAGAACCTCGCCT...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGCTGCAGACATTGAGCTaGACGGTTCTCAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWLQTLS*TVLNRS
Trigger: TGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAG...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAAGTCACACAGCACCATaGACATGCAGAGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKESHTAP*TCRGTS
Trigger: ACTGGTACCTCTGCATGTCCATGGTGCTGTGTGACT...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTATCACTGGCTGCTGGCTaGCCAGTCACACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLSLAAG*PVTQHH
Trigger: ATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGA...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCACTGGCTGCTGGCTaGCCAGTCACACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSSLAAG*PVTQHH
Trigger: ATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATAACCCCAGCTACTTaGAAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWITPAT*KAEAGE
Trigger: TTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGGTTAT...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGAGGACAGTGGTGTTTaGCTTCGGTCCCAACATACA +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEEDSGV*LRSQHT
Trigger: TGTATGTTGGGACCGAAGCCAAACACCACTGTCCTC...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGCCGCAGGGTCTTTCTaGAAGCCCCTCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWAAGSF*KPLHQH
Trigger: GTGCTGGTGGAGGGGCTTCCAGAAAGACCCTGCGGC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTGCCGCAGGGTCTTTCTaGAAGCCCCTCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGAAGSF*KPLHQH
Trigger: GTGCTGGTGGAGGGGCTTCCAGAAAGACCCTGCGGC...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATGCCGCAGGGTCTTTCTaGAAGCCCCTCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANAAGSF*KPLHQH
Trigger: GTGCTGGTGGAGGGGCTTCCAGAAAGACCCTGCGGC...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp TTCCGTTCCTGGACTGTCGTCTTCACCGCCTGGTTTTCCATGGAAAGGAAGCCTGTCCTTGTGCACGGATaGTCTCAAGTGATCAGGATA +
Preference number: 4 (lower is better)
Translates to: FRSWTVVFTAWFSMERKPVLVHG*SQVIRI
Trigger: TATCCTGATCACTTGAGACCATCCGTGCACAAGGAC...AGGCTTCCTTTCCATGGAAAACCAGGCGGTGAAGACGACAGTCCAGGAACGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAAACAGACCTCACAAATaGGGAGTCTTTGTCAGACCC +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPNRPHK*GVFVRP
Trigger: GGGTCTGACAAAGACTCCCCATTTGTGAGGTCTGTT...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTAGTGGCAGGACCCCATaGTTGCTACTGTGCGTAGGC +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSSGRTP*LLLCVG
Trigger: GCCTACGCACAGTAGCAACCATGGGGTCCTGCCACT...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GGCTCCATCTATTTTCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACAAGGGAAGGAGGGTCTaGCTCGAGTGGCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: GSIYFPLINFSTDTNSPNKGRRV*LEWQDP
Trigger: GGGGTCCTGCCACTCGAGCCAGACCCTCCTTCCCTT...GTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGAAAATAGATGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAAGGTCTCCAGGCTGGTaGACTCCACCTCCCCGAACG +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRRSPGW*TPPPRT
Trigger: CGTTCGGGGAGGTGGAGTTCACCAGCCTGGAGACCT...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATAGGTCTCCAGGCTGGTaGACTCCACCTCCCCGAACG +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHRSPGW*TPPPRT
Trigger: CGTTCGGGGAGGTGGAGTTCACCAGCCTGGAGACCT...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCAGGCAAGTGGGTCATaGTCTGCATTCGCAGCCACC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVQASGS*SAFAAT
Trigger: GGTGGCTGCGAATGCAGATCATGACCCACTTGCCTG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCTGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp ATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCTGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: IQDLSGAPTQHHDKVPAVWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...GACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGATCCACACCCTGTTTGTaGAGGCCCAAGTCACTCACT +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRSTPCL*RPKSLT
Trigger: AGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGA...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCTGGCAGCTTTCAAACTaGAACCCAAGAAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIWQLSN*NPRSDH
Trigger: ATGATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCA...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp TCTTCTCAGACCCCTATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACTACACCCAAAGCTTGTaGATGACTCCATCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: SSQTPIQDLSGAPTQHHDYTQSL*MTPSKE
Trigger: CTCTTTGGATGGAGTCATTCACAAGCTTTGGGTGTA...GTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGACTACCCCTCACTTGGTaGCAGACTTGGGAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGLPLTW*QTWESL
Trigger: CAGGCTTTCCCAAGTCTGTCACCAAGTGAGGGGTAG...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTTCTTGCCGTAGTCCTTaGGCACGACCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVSCRSP*ARPQAA
Trigger: AGCTGCCTGAGGTCGTGCGCAAGGACTACGGCAAGA...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp GCAAGCAAGATGGGGAAGAACCCTTCTTGGTGTGATCTTTCCTCCCTCTTGAAATGTCTGTGGAGCCACTaGTGCAGTAGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: ASKMGKNPSWCDLSSLLKCLWSH*CSRSPS
Trigger: AGATGGAGACCTACTGCAGCAGTGGCTCCACAGACA...TTTCAAGAGGGAGGAAAGATCACACCAAGAAGGGTTCTTCCCCATCTTGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCACCAAGTCACTCACTATaGAAAGAAGTCATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAPSHSL*KEVIPS
Trigger: AGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGG...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGATGCCACAGTGCCCTaGCATGGCACCACTGCTCGT +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWDATVP*HGTTAR
Trigger: ACGAGCAGTGGTGCCATGGCAGGGCACTGTGGCATC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGCCACGCTGAAGCCCTaGAGAACAGGGGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWATLKP*RTGVCV
Trigger: CACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAGAATCCAGCTCTGCCTaGTTGGTCTTTGAATTCCTA +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPESSSA*LVFEFL
Trigger: TAGGAATTCAAAGACCAAGCAGGCAGAGCTGGATTC...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTGAGGTCTGGATCTTaGAGGGTCTATATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEVRSGS*RVYILR
Trigger: CCTCAAGATATAGACCCTGCAAGATCCAGACCTCAC...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATGCTGCTCCGCGAAACTaGGGACTAGGAGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANAAPRN*GLGGSW
Trigger: CCAGCTTCCTCCTAGTCCGCAGTTTCGCGGAGCAGC...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCGTCCGGCACAGGGCTaGCCCTCAGAATGTGACACT +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWRPAQG*PSECDT
Trigger: AGTGTCACATTCTGAGGGGCAGCCCTGTGCCGGACG...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGCTGTCGGACGACCGTaGCTAGACAGGGCACAACGA +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWAVGRP*LDRAQR
Trigger: TCGTTGTGCCCTGTCTAGGCACGGTCGTCCGACAGC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTCCCGGCCCAAGTCATaGCCACGGTTACCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGSRPKS*PRLPCV
Trigger: GACACAGGGTAACCGTGGGCATGACTTGGGCCGGGA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCAACGGGTGTTAGAATaGCCCAGTTCCTCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVQRVLE*PSSSRW
Trigger: CCACCGGGAGGAACTGGGCCATTCTAACACCCGTTG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR CCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGAACATCTTCTTGGCGATaGCCTGAATGCTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRTSSWR*PECSQG
Trigger: GCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGT...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCAGGGGACGTGTCTGTaGAGCCACTGCTGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWQGTCL*SHCCSR
Trigger: CCTACTGCAGCAGTGGCTCCACAGACACGTCCCCTG...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAACCAGTAGTAGTCCATaGGGTGGTAGCGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLTSSSP*GGSGCR
Trigger: CCTACACCCGCTACCACCCCATGGACTACTACTGGT...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGAAGATCATGTCGGAGATaGCTCCAGGCAAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRRSCRR*LQASGS
Trigger: TGACCCACTTGCCTGGAGCCATCTCCGACATGATCT...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGACAAGAGTTGACTATATaGGTTCCTCCCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRQELTI*VPPSPP
Trigger: GGGAGGGGAGGGAGGAACCCATATAGTCAACTCTTG...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATTAGCCCGGCATGGTaGTGGGTGCCTATAACCCCA +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGISPAW*WVPITP
Trigger: TGGGGTTATAGGCACCCACCACCATGCCGGGCTAAT...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTCACAGTGCCCTGCCATaGCACCACTGCTCGTGCCAA +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGHSALP*HHCSCQ
Trigger: TTGGCACGAGCAGTGGTGCCATGGCAGGGCACTGTG...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTCCAACATACAGGCCCTaGGCAGTCGCAGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGPTYRP*AVAGMA
Trigger: TGCCATCCCTGCGACTGCCCAGGGCCTGTATGTTGG...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATCTTCTGCCTTCTCCTaGCACCAGCCTCCGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQSSAFS*HQPPGP
Trigger: CGGGCCCGGAGGCTGGTGCCAGGAGAAGGCAGAAGA...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCATACAAAAGCATCCTATaGTTATGTAACTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAYKSIL*LCNCSG
Trigger: GCCGCTGCAGTTACATAACCATAGGATGCTTTTGTA...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGCCGCAGGGTCTTTCTaGAAGCCCCTCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHAAGSF*KPLHQH
Trigger: GTGCTGGTGGAGGGGCTTCCAGAAAGACCCTGCGGC...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGGTTCCAAAACCAAATaGGCAGGGGGCTCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVGSKTK*AGGSAA
Trigger: TGCAGCGGAGCCCCCTGCCCATTTGGTTTTGGAACC...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392378.6
ENST00000612690.3
ENST00000651856.1
CDS-3UTR CCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAACCCCCTGCCATGGGTaGCAAGGGTGCAGACCTAGC +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRTPCHG*QGCRPS
Trigger: GCTAGGTCTGCACCCTTGCCACCCATGGCAGGGGGT...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 72 bp TCTGCTTGCTCATGTCGGCTCCTATATCAACACAGTTaGCACAGGTTTGCAGAGCCAGGCCCTGTTCGAAAT +
Preference number: 4 (lower is better)
Translates to: SACSCRLLYQHS*HRFAEPGPVRN
Trigger: ATTTCGAACAGGGCCTGGCTCTGCAAACCTGTGCAAACTGTGTTGATATAGGAGCCGACATGAGCAAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
3UTR CAA 72 bp TATGCAGATCAGATGAGAGATTTGCCACGAACTCACTaGAGTAGTTGGGAGGGGCACGTGCATGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: YADQMRDLPRTH*SSWEGHVHVRS
Trigger: ACTCCTCACATGCACGTGCCCCTCCCAACTACTCAAGTGAGTTCGTGGCAAATCTCTCATCTGATCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCAGAGTCACAGCCTGTaGCCAGGACAGCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWQSHSL*PGQLCC
Trigger: GCAGCAAAGCTGTCCTGGTCACAGGCTGTGACTCTG...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTCAGAGTCACAGCCTGTaGCCAGGACAGCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGQSHSL*PGQLCC
Trigger: GCAGCAAAGCTGTCCTGGTCACAGGCTGTGACTCTG...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR TCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCACCTCCCCGAACGTTaGGATGCCGGCATTGTTAAC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVHLPER*DAGIVN
Trigger: GTTAACAATGCCGGCATCTCAACGTTCGGGGAGGTG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAACTACCCCGAACTTGGTaGTGCAGTACGGGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQLPRTW*CSTGSG
Trigger: CCCGCTCCCCGTACTGCATCACCAAGTTCGGGGTAG...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATCCACCAGGGATCCCTaGCAGAGGCCACAGCGAGAC +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQSTRDP*QRPQRD
Trigger: GTCTCGCTGTGGCCTCTGTCAGGGATCCCTGGTGGA...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCATGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCACCATGTTTGCCCTaGGATTTAGAGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSSPCLP*DLEASA
Trigger: GGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGACCATACAGCCAGCTCTaGGTCACTGGCTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRPYSQL*VTGCWL
Trigger: CAGCCAGCAGCCAGTGACTCAGAGCTGGCTGTATGG...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTGTGTAAGCACCACGTaGGGCAAGCAGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGCVSTT*GKQGPQ
Trigger: TTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTACTGAAACCCAAGAAGTaGTCATGCAGACCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLLKPKK*SCRPCL
Trigger: GAGGCAGGGTCTGCATGATCACTTCTTGGGTTTCAG...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGACTGAAACCCAAGAAGTaGTCATGCAGACCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGLKPKK*SCRPCL
Trigger: GAGGCAGGGTCTGCATGATCACTTCTTGGGTTTCAG...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCATGGCAGCTTTCAAACTaGAACCCAAGAAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPWQLSN*NPRSDH
Trigger: ATGATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCA...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp TCTTCTCAGACCCCTATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACTTCACTAGACAGAAATaGGGGTTCACTAGGAAAACC +
Preference number: 4 (lower is better)
Translates to: SSQTPIQDLSGAPTQHHDFTRQK*GFTRKT
Trigger: GGTTTTCCTAGTGAACCCTCATTTCTGTCTAGTGAA...GTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GGCTCCATCTATTTTCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACGGTCTAGGTGCCTGGTaGCCCCAACTGGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GSIYFPLINFSTDTNSPNGLGAW*PQLALL
Trigger: AAGCAAAGCCAGTTGGGGTCACCAGGCACCTAGACC...GTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGAAAATAGATGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTTGCTGCCATCTGCCCTaGTTTTCCGCATCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVCCHLP*FSASPA
Trigger: AGCTGGTGATGCGGAAAATCAGGGCAGATGGCAGCA...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp CACACACCAGAGAGGCCTCATATACTGTGGGGTTGTTTCATCTCCCCCAGAGCACTTGCTCTGTCTCTTTaGGCAGAAATCATCACTAAC +
Preference number: 4 (lower is better)
Translates to: HTPERPHILWGCFISPRALALSL*AEIITN
Trigger: GTTAGTGATGATTTCTGCTCAAAGAGACAGAGCAAG...TGCTCTGGGGGAGATGAAACAACCCCACAGTATATGAGGCCTCTCTGGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAACCTTTTGAATGCAGATaGTTGGCCAATGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEPFECR*LANENP
Trigger: TGGGTTCTCATTGGCCAAGCATCTGCATTCAAAAGG...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAAGGAAGCCTTTTGAATaGAGATGCTTGGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKERKPFE*RCLANE
Trigger: CTCATTGGCCAAGCATCTGCATTCAAAAGGCTTCCT...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGACCAAAGGTTCACTTCTaGCACCTGCTTGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRPKVHF*HLLVGL
Trigger: GAGACCTACAAGCAGGTGGCAGAAGTGAACCTTTGG...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTTGGCGATGGCCTGAATaGTCTCAGGGCTGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVWRWPE*SQGCKG
Trigger: GCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCA...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTCTTGCCGTAGTCCTTaGGCACGACCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGSCRSP*ARPQAA
Trigger: AGCTGCCTGAGGTCGTGCGCAAGGACTACGGCAAGA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGATGTCTGTGGAGCCACTaGTGCAGTAGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGCLWSH*CSRSPS
Trigger: AGATGGAGACCTACTGCAGCAGTGGCTCCACAGACA...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCACAGCACCATGGACATaGAGAGGTACCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LSNGRPELLNLTWPLPNITAPWT*RGTSGH
Trigger: GTGCCCACTGGTACCTCTGCATGTCCATGGTGCTGT...GATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GGCTCCATCTATTTTCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACCAGGGGATGGGTTTGTaGTGGCTGGAGTCACCAGAC +
Preference number: 4 (lower is better)
Translates to: GSIYFPLINFSTDTNSPNQGMGL*WLESPD
Trigger: GTCTGGTGACTCCAGCCAGCACAAACCCATCCCCTG...GTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGAAAATAGATGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATCACTGCAGACACACGTaGGACGAGACAGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANHCRHT*DETGKP
Trigger: AGGCTTCCCTGTCTCGTCGCACGTGTGTCTGCAGTG...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTCACGACAAGGTCCCTaGAGTCCTCAGGGGAAACCC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGSRQGP*SPQGKP
Trigger: GGGTTTCCCCTGAGGACTGCAGGGACCTTGTCGTGA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAACATCTTCTTGGCGATaGCCTGAATGCTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLTSSWR*PECSQG
Trigger: GCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGT...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTACATCTTCTTGGCGATaGCCTGAATGCTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSTSSWR*PECSQG
Trigger: GCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGT...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTACCTCCCACATCTTCTTaGCGATGGCCTGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLPPTSS*RWPECS
Trigger: AGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGG...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAGTAGGTCTCCATCTTaGCGATCTTTTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYASRSPS*RSFHQS
Trigger: ACTTTGATGAAAAGATCGCCAAGATGGAGACCTACT...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTATGGCTCCAGGCAAGTaGGTCATGATCTGCATTCGC +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSMAPGK*VMICIR
Trigger: GCGAATGCAGATCATGACCCACTTGCCTGGAGCCAT...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCATTAGCCCGGCATGGTaGTGGGTGCCTATAACCCCA +
Preference number: 4 (lower is better)
Translates to: LSNGRPELLNLTWPLPNIISPAW*WVPITP
Trigger: TGGGGTTATAGGCACCCACCACCATGCCGGGCTAAT...GATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGACACAGTGCCCTGCCATaGCACCACTGCTCGTGCCAA +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRHSALP*HHCSCQ
Trigger: TTGGCACGAGCAGTGGTGCCATGGCAGGGCACTGTG...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCCCCCTGGAGGACAGTaGTGTTTGGCTTCGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHPPGGQ*CLASVP
Trigger: TGGGACCGAAGCCAAACACCACTGTCCTCCAGGGGG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTGAGGCCCTTCTTCCTTaGCACTGCCTGAACCCCGTA +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGEALLP*HCLNPV
Trigger: TACGGGGTTCAGGCAGTGCCAAGGAAGAAGGGCCTC...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AGGTGCTCTGTAACAAGGCACTGTCAGGCGCATCTTGCAAGAAGCCCTTGCCCATTTCGGCTCAGTCTTTaGATAAACGTTTCTGAACCA +
Preference number: 4 (lower is better)
Translates to: RCSVTRHCQAHLARSPCPFRLSL*INVSEP
Trigger: TGGTTCAGAAACGTTTATCCAAAGACTGAGCCGAAA...TGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGTGCCTTGTTACAGAGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCATCAAGAATGAGGGATTaGATAACCACAGCTGAAACC +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPSRMRD*ITTAET
Trigger: GGTTTCAGCTGTGGTTATCCAATCCCTCATTCTTGA...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp ATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCTTAGACTTCTTCTGGTaGACATTAGCATCACACTCT +
Preference number: 4 (lower is better)
Translates to: IQDLSGAPTQHHDKVPAVLDFFW*TLASHS
Trigger: AGAGTGTGATGCTAATGTCCACCAGAAGAAGTCTAA...GACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp TGCCTTCGGACACAGCAGCCAGGCCGGAGGCTCGATGGTCTAAAGTTTGGCTCTAGTAAACTCTTAATTTaGCAGTTTGACAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: CLRTQQPGRRLDGLKFGSSKLLI*QFDSEE
Trigger: CTCTTCACTGTCAAACTGCCAAATTAAGAGTTTACT...AGAGCCAAACTTTAGACCATCGAGCCTCCGGCCTGGCTGCTGTGTCCGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAGTTGACAGGGCGTATTaGCACCCCTGGAAACCTTTT +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGVDRAY*HPWKPF
Trigger: AAAAGGTTTCCAGGGGTGTCAATACGCCCTGTCAAC...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358186.6
CDS-3UTR TCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTACAGATGCTTGGCCAATaGGAACCCAAATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLQMLGQ*EPKSRV
Trigger: GACTCTGGATTTGGGTTCTCATTGGCCAAGCATCTG...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTCAGATGCTTGGCCAATaGGAACCCAAATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSQMLGQ*EPKSRV
Trigger: GACTCTGGATTTGGGTTCTCATTGGCCAAGCATCTG...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCGCTGCTGCAGACATTaGGCTGGACGGTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWRCCRH*AGRFSI
Trigger: GATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCG...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTCACCTCCCCGAACGTTaGGATGCCGGCATTGTTAAC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGHLPER*DAGIVN
Trigger: GTTAACAATGCCGGCATCTCAACGTTCGGGGAGGTG...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCACCTCCCCGAACGTTaGGATGCCGGCATTGTTAAC +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWHLPER*DAGIVN
Trigger: GTTAACAATGCCGGCATCTCAACGTTCGGGGAGGTG...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATCACCTCCCCGAACGTTaGGATGCCGGCATTGTTAAC +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANHLPER*DAGIVN
Trigger: GTTAACAATGCCGGCATCTCAACGTTCGGGGAGGTG...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAATGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGATGTGTAAGCACCACGTaGGGCAAGCAGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRCVSTT*GKQGPQ
Trigger: TTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACA...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAGCATCACTTCTTAATTaGAAAGAGGCCGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGASLLN*KEAEAR
Trigger: CCTCGCCTCGGCCTCTTTTCAATTAAGAAGTGATGC...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGACGAGAACACTGTTTCTaGAGGGTGCTGCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGREHCF*RVLLAS
Trigger: AGAAGCAAGCAGCACCCTTCAGAAACAGTGTTCTCG...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CACACACCAGAGAGGCCTCATATACTGTGGGGTTGTTTCATCTCCCCCAGAGCAGGTGAATATGAGGTTTaGGTTAGCACTGGAGTTATT +
Preference number: 4 (lower is better)
Translates to: HTPERPHILWGCFISPRAGEYEV*VSTGVI
Trigger: AATAACTCCAGTGCTAACTCAAACCTCATATTCACC...TGCTCTGGGGGAGATGAAACAACCCCACAGTATATGAGGCCTCTCTGGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTCCAAAGGTTCACTTCTaGCACCTGCTTGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSPKVHF*HLLVGL
Trigger: GAGACCTACAAGCAGGTGGCAGAAGTGAACCTTTGG...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTGGCGATGGCCTGAATaGTCTCAGGGCTGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGWRWPE*SQGCKG
Trigger: GCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGTGGCGATGGCCTGAATaGTCTCAGGGCTGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWWRWPE*SQGCKG
Trigger: GCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCA...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAACCAAGTCACTCACTATaGAAAGAAGTCATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEPSHSL*KEVIPS
Trigger: AGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGG...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGACTTCTTCCTTGGCACTaGCTGAACCCCGTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRLLPWH*LNPVAH
Trigger: GTGGGCTACGGGGTTCAGGCAGTGCCAAGGAAGAAG...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTCCTCAAAGTAGGAACTaGAGGGTGACTCTGCATCAG +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSPQSRN*RVTLHQ
Trigger: CTGATGCAGAGTCACCCTGCAGTTCCTACTTTGAGG...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392379.6
ENST00000441275.5
ENST00000617317.2
ENST00000631323.2
CDS-3UTR GCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCGCCCACTCAGTGGGTaGTTCAAAGCTTCATCAAGC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVRPLSG*FKASSS
Trigger: GCTTGATGAAGCTTTGAAGCACCCACTGAGTGGGCG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTAGCACAGGTGATATCTaGAGAGGAAGCTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSSTGDI*RGSFWV
Trigger: GACCCAGAAGCTTCCTCTGCAGATATCACCTGTGCT...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGGTAAAGGAAGGGGCTaGGGGTATAGAAGTCAGATG +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLGKGRG*GYRSQM
Trigger: CATCTGACTTCTATACCCGCAGCCCCTTCCTTTACC...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTCCACGGCGCCCGGCCTaGCATTCAAATTTTGTACCA +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGPRRPA*HSNFVP
Trigger: TGGTACAAAATTTGAATGGCAGGCCGGGCGCCGTGG...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCATTTATTTTTCTCTACTaGTTTTACCACCCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAFIFLY*FYHPSR
Trigger: TCTGCTCGGGTGGTAAAAGCAGTAGAGAAAAATAAA...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCAGTAGGTCTCCATCTTaGCGATCTTTTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTSRSPS*RSFHQS
Trigger: ACTTTGATGAAAAGATCGCCAAGATGGAGACCTACT...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAAGTAGGTCTCCATCTTaGCGATCTTTTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPSRSPS*RSFHQS
Trigger: ACTTTGATGAAAAGATCGCCAAGATGGAGACCTACT...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTATGGCTCCAGGCAAGTaGGTCATGATCTGCATTCGC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVMAPGK*VMICIR
Trigger: GCGAATGCAGATCATGACCCACTTGCCTGGAGCCAT...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCAAGAGTTGACTATATaGGTTCCTCCCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVQELTI*VPPSPP
Trigger: GGGAGGGGAGGGAGGAACCCATATAGTCAACTCTTG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAAGACCCTGCCTCAAGTaGCATCACTTCTTAATTGAA +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKERPCLK*HHFLIE
Trigger: TTCAATTAAGAAGTGATGCCACTTGAGGCAGGGTCT...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAACCAACATACAGGCCCTaGGCAGTCGCAGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQPTYRP*AVAGMA
Trigger: TGCCATCCCTGCGACTGCCCAGGGCCTGTATGTTGG...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAGGTGAGAGGAAGCTGTaGTGGCTGGGTAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQGERKL*WLGSRT
Trigger: GGTCCTGCTACCCAGCCACCACAGCTTCCTCTCACC...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTACACAAGGAAGCCTTTTaGATGCAGATGCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLHKEAF*MQMLGQ
Trigger: TTGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTG...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCGCTGCTGCAGACATTaGGCTGGACGGTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHRCCRH*AGRFSI
Trigger: GATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTCACCATGTTTGCCCTaGGATTTAGAGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGSPCLP*DLEASA
Trigger: GGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGTCACCATGTTTGCCCTaGGATTTAGAGGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWSPCLP*DLEASA
Trigger: GGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGA...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATTCCAGCCTAGGGGACTaGGCAAGACTGTGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHSSLGD*ARLCLE
Trigger: TTCCAGACACAGTCTTGCTCAGTCCCCTAGGCTGGA...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGACACACAAGTCTATCCTaGGTCCTAAAAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRHTSLS*VLKEDG
Trigger: TCCATCCTCTTTTAGGACTCAGGATAGACTTGTGTG...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCAGAGTCACAGCCTGTaGCCAGGACAGCTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHQSHSL*PGQLCH
Trigger: GTGACAAAGCTGTCCTGGTCACAGGCTGTGACTCTG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441275.5
ENST00000631323.2
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCTACTGTGCGTAGGCTaGGAGTCTCCTCGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHLLCVG*ESPRCY
Trigger: GTAACAGCGAGGAGACTCTCAGCCTACGCACAGTAG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp ACCAATTTGCCCCCAGTTATTCAGAGAAATCTTTCCAACCACCCTCAGCCTGCTAAGGTGGATTCTAGCTaGCATGCACAAGAGGTATCT +
Preference number: 4 (lower is better)
Translates to: TNLPPVIQRNLSNHPQPAKVDSS*HAQEVS
Trigger: AGATACCTCTTGTGCATGTCAGCTAGAATCCACCTT...AGCAGGCTGAGGGTGGTTGGAAAGATTTCTCTGAATAACTGGGGGCAAATTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGACCTTTTGAATGCAGATaGTTGGCCAATGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRPFECR*LANENP
Trigger: TGGGTTCTCATTGGCCAAGCATCTGCATTCAAAAGG...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCCAAAGGTTCACTTCTaGCACCTGCTTGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVPKVHF*HLLVGL
Trigger: GAGACCTACAAGCAGGTGGCAGAAGTGAACCTTTGG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATCTTGCCGTAGTCCTTaGGCACGACCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQSCRSP*ARPQAA
Trigger: AGCTGCCTGAGGTCGTGCGCAAGGACTACGGCAAGA...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAGCACTTGGTGTGTGCTaGCCAGATGAGGACACAGAG +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRALGVC*PDEDTE
Trigger: CTCTGTGTCCTCATCTGGGCAGCACACACCAAGTGC...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATACAGCACCATGGACATaGAGAGGTACCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHTAPWT*RGTSGH
Trigger: GTGCCCACTGGTACCTCTGCATGTCCATGGTGCTGT...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAACTTCTTCCTTGGCACTaGCTGAACCCCGTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQLLPWH*LNPVAH
Trigger: GTGGGCTACGGGGTTCAGGCAGTGCCAAGGAAGAAG...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCTATGGTTATGTAACTaGAGCGGCCACCAAGCGTCC +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWLWLCN*SGHQAS
Trigger: GGACGCTTGGTGGCCGCTGCAGTTACATAACCATAG...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GCAAGCAAGATGGGGAAGAACCCTTCTTGGTGTGATCTTTCCTCCCTCTTGAAACCCCAGTGTTGCTCTTaGTCCATTTTCTCTATCACA +
Preference number: 4 (lower is better)
Translates to: ASKMGKNPSWCDLSSLLKPQCCS*SIFSIT
Trigger: TGTGATAGAGAAAATGGAGCAAGAGCAACACTGGGG...TTTCAAGAGGGAGGAAAGATCACACCAAGAAGGGTTCTTCCCCATCTTGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTTTTTCCAGCCTTCCTTaGAGCCAGGTAAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVFSSLP*SQVRPC
Trigger: ACATGGCCTTACCTGGCTGCAAGGAAGGCTGGAAAA...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAGCAGGGACGCACACGTaGAACTCCAAGGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQAGTHT*NSKAPS
Trigger: AGATGGAGCCTTGGAGTTGCACGTGTGCGTCCCTGC...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAACAACGGGTGTTAGAATaGCCCAGTTCCTCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQQRVLE*PSSSRW
Trigger: CCACCGGGAGGAACTGGGCCATTCTAACACCCGTTG...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCTGCAGACATTGAGCTaGACGGTTCTCAATCGGTCA +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVLQTLS*TVLNRS
Trigger: TGACCGATTGAGAACCGTCCAGCTCAATGTCTGCAG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGACATCTTCTTGGCGATaGCCTGAATGCTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWTSSWR*PECSQG
Trigger: GCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGT...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTCCTCCCACATCTTCTTaGCGATGGCCTGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGPPTSS*RWPECS
Trigger: AGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGG...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATCCTCCCACATCTTCTTaGCGATGGCCTGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANPPTSS*RWPECS
Trigger: AGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGG...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCCTCCCACATCTTCTTaGCGATGGCCTGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWPPTSS*RWPECS
Trigger: AGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGG...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAAGTAGGTCTCCATCTTaGCGATCTTTTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKESRSPS*RSFHQS
Trigger: ACTTTGATGAAAAGATCGCCAAGATGGAGACCTACT...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAACCAGTAGTAGTCCATaGGGTGGTAGCGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRTSSSP*GGSGCR
Trigger: CCTACACCCGCTACCACCCCATGGACTACTACTGGT...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTATGGCTCCAGGCAAGTaGGTCATGATCTGCATTCGC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGMAPGK*VMICIR
Trigger: GCGAATGCAGATCATGACCCACTTGCCTGGAGCCAT...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATAGATCATGTCGGAGATaGCTCCAGGCAAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANRSCRR*LQASGS
Trigger: TGACCCACTTGCCTGGAGCCATCTCCGACATGATCT...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTCAAGAGTTGACTATATaGGTTCCTCCCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGQELTI*VPPSPP
Trigger: GGGAGGGGAGGGAGGAACCCATATAGTCAACTCTTG...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGTATTTCCACAGCCGTaGCAGGAACACATAACTGGC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVVFPQP*QEHITG
Trigger: GCCAGTTATGTGTTCCTGCCACGGCTGTGGAAATAC...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGAAGATTCTCGGGCAAATaGATCCAAAACAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRRFSGK*IQNSPG
Trigger: TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCT...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTAGTCACACAGCACCATaGACATGCAGAGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVSHTAP*TCRGTS
Trigger: ACTGGTACCTCTGCATGTCCATGGTGCTGTGTGACT...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATATTAGCCCGGCATGGTaGTGGGTGCCTATAACCCCA +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHISPAW*WVPITP
Trigger: TGGGGTTATAGGCACCCACCACCATGCCGGGCTAAT...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp TTGTCAAATGGGAGACCTGAGCTCTTAAACCTGACTTGGCCACTTCCAAATATCAGGCCTCATATACTGTaGGGTTGTTTCATCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LSNGRPELLNLTWPLPNIRPHIL*GCFISP
Trigger: GGGGGAGATGAAACAACCCCACAGTATATGAGGCCT...GATATTTGGAAGTGGCCAAGTCAGGTTTAAGAGCTCAGGTCTCCCATTTGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp GGCTCCATCTATTTTCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACGGATCTTGCGGGGTCTaGATCTTGGCTCTCTCGTTT +
Preference number: 4 (lower is better)
Translates to: GSIYFPLINFSTDTNSPNGSCGV*ILALSF
Trigger: AAACGAGAGAGCCAAGATCCAGACCCCGCAAGATCC...GTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGAAAATAGATGGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGGGAAGAACCCTTCTTaGTGTGATCTTTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVGKNPS*CDLSSL
Trigger: GAGGGAGGAAAGATCACACCAAGAAGGGTTCTTCCC...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTCAGATGCTTGGCCAATaGGAACCCAAATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGQMLGQ*EPKSRV
Trigger: GACTCTGGATTTGGGTTCTCATTGGCCAAGCATCTG...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGATGTGTGCTGCCCAGATaGGGACACAGAGTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRCVLPR*GHRVSQ
Trigger: CTGACTAACTCTGTGTCCTCATCTGGGCAGCACACA...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATTGTGTGCTGCCCAGATaGGGACACAGAGTTAGTCAG +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHCVLPR*GHRVSQ
Trigger: CTGACTAACTCTGTGTCCTCATCTGGGCAGCACACA...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTACACACAAGTCTATCCTaGGTCCTAAAAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLHTSLS*VLKEDG
Trigger: TCCATCCTCTTTTAGGACTCAGGATAGACTTGTGTG...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGCATCACTTCTTAATTaGAAAGAGGCCGAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWASLLN*KEAEAR
Trigger: CCTCGCCTCGGCCTCTTTTCAATTAAGAAGTGATGC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCCAGGTAAGGCCATGTaGCTAAGTTCTGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHPGKAM*LSSGQE
Trigger: CTCTTGGCCAGAACTTAGTCACATGGCCTTACCTGG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTGCCTGCTTGGTCTTTaGATTCCTAGAGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGCLLGL*IPRACS
Trigger: AGAGCAGGCTCTAGGAATTCAAAGACCAAGCAGGCA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCCAAAGGTTCACTTCTaGCACCTGCTTGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWPKVHF*HLLVGL
Trigger: GAGACCTACAAGCAGGTGGCAGAAGTGAACCTTTGG...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAGCATCCTCTTTAAGCTaGAAATGCTTCATTTACAAA +
Preference number: 4 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPASSLS*KCFIYK
Trigger: TTTGTAAATGAAGCATTTGCAGCTTAAAGAGGATGC...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAACAGCACCATGGACATaGAGAGGTACCAGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQTAPWT*RGTSGH
Trigger: GTGCCCACTGGTACCTCTGCATGTCCATGGTGCTGT...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATCTGAAGGGTGCTGCTTaGTTCTTTGTTCCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANLKGAA*FFVPGF
Trigger: GAAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAG...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTCTGAAGGGTGCTGCTTaGTTCTTTGTTCCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGLKGAA*FFVPGF
Trigger: GAAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAG...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp GGCTCCATCTATTTTCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACCTGAAGGGTGCTGCTTaGTTCTTTGTTCCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: GSIYFPLINFSTDTNSPNLKGAA*FFVPGF
Trigger: GAAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAG...GTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGAAAATAGATGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCTATGGTTATGTAACTaGAGCGGCCACCAAGCGTCC +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHLWLCN*SGHQAS
Trigger: GGACGCTTGGTGGCCGCTGCAGTTACATAACCATAG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTGGTTCAGGACATTTaGAGCGTCACAAAAGATCCT +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLVVQDI*SVTKDP
Trigger: AGGATCTTTTGTGACGCTGCAAATGTCCTGAACCAC...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392379.6
ENST00000617317.2
CDS-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCTTCCTTCTTGGGGTaGTTCTGTGGAGTCTACAAA +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSSSFLG*FCGVYK
Trigger: TTTGTAGACTCCACAGAAGCACCCCAAGAAGGAAGA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCCTCCCACATCTTCTTaGCGATGGCCTGAATGCTCT +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHPPTSS*RWPECS
Trigger: AGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAATGGCTCCAGGCAAGTaGGTCATGATCTGCATTCGC +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRMAPGK*VMICIR
Trigger: GCGAATGCAGATCATGACCCACTTGCCTGGAGCCAT...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATAGATCATGTCGGAGATaGCTCCAGGCAAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHRSCRR*LQASGS
Trigger: TGACCCACTTGCCTGGAGCCATCTCCGACATGATCT...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGTATTTCCACAGCCGTaGCAGGAACACATAACTGGC +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWVFPQP*QEHITG
Trigger: GCCAGTTATGTGTTCCTGCCACGGCTGTGGAAATAC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAAGATTCTCGGGCAAATaGATCCAAAACAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLRFSGK*IQNSPG
Trigger: TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCT...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTATAACCCCAGCTACTTaGAAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGITPAT*KAEAGE
Trigger: TTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGGTTAT...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGACAGACAGCGAGGAGATaGAAATCTTGTCAAATGGGA +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGQTARR*KSCQMG
Trigger: TCCCATTTGACAAGATTTCCATCTCCTCGCTGTCTG...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGAAAAGACCATTCAGCCTaGTGTGTGTCATCAAGAATG +
Preference number: 4 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRKDHSA*CVSSRM
Trigger: CATTCTTGATGACACACACCAGGCTGAATGGTCTTT...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTATGGTGCGTGTGCAACTaGCTTATTGATAAACCCACT +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLWCVCN*LIDKPT
Trigger: AGTGGGTTTATCAATAAGCCAGTTGCACACGCACCA...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp GCAAGCAAGATGGGGAAGAACCCTTCTTGGTGTGATCTTTCCTCCCTCTTGAAAAAATGTCCTTCCTCTTaGGACTTGGTTAACCCTGTT +
Preference number: 4 (lower is better)
Translates to: ASKMGKNPSWCDLSSLLKKCPSS*DLVNPV
Trigger: AACAGGGTTAACCAAGTCCCAAGAGGAAGGACATTT...TTTCAAGAGGGAGGAAAGATCACACCAAGAAGGGTTCTTCCCCATCTTGCTTGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp ATTTTAGGCCGGGTACATATTGTCTCAGAATACTCACTACATTTTCCAGCCTTCCCTTCAAATGCCCCTTaGCGTGGAGCTCACATGATC +
Preference number: 4 (lower is better)
Translates to: ILGRVHIVSEYSLHFPAFPSNAP*RGAHMI
Trigger: GATCATGTGAGCTCCACGCCAAGGGGCATTTGAAGG...GAAGGCTGGAAAATGTAGTGAGTATTCTGAGACAATATGTACCCGGCCTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 72 bp GAGGCAGCCAATGAGCTGATTCTGGCAGAAAGGTTTTaGTCTCTAGCATATATGTTCAGGTGGTTTAGCACC +
Preference number: 4 (lower is better)
Translates to: EAANELILAERF*SLAYMFRWFST
Trigger: GGTGCTAAACCACCTGAACATATATGCTAGAGACAAAAACCTTTCTGCCAGAATCAGCTCATTGGCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
3UTR CAA 72 bp CTGACAACCACGCCAATAGGGACAGAAACTACCAATTaGCCCCCAGTTATTCAGAGAAATCTTTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: LTTTPIGTETTN*PPVIQRNLSNH
Trigger: GTGGTTGGAAAGATTTCTCTGAATAACTGGGGGCAAATTGGTAGTTTCTGTCCCTATTGGCGTGGTTGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCAGATGCTTGGCCAATaGGAACCCAAATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHQMLGQ*EPKSRV
Trigger: GACTCTGGATTTGGGTTCTCATTGGCCAAGCATCTG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATCACAAGGAAGCCTTTTaGATGCAGATGCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANHKEAF*MQMLGQ
Trigger: TTGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTG...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTCACAAGGAAGCCTTTTaGATGCAGATGCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGHKEAF*MQMLGQ
Trigger: TTGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTG...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCGAGAACACTGTTTCTaGAGGGTGCTGCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHREHCF*RVLLAS
Trigger: AGAAGCAAGCAGCACCCTTCAGAAACAGTGTTCTCG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATCGTTTCCTGGCTCTGTaGTTTTGGGCAAATGACTTC +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANRFLAL*FWANDF
Trigger: GAAGTCATTTGCCCAAAATCACAGAGCCAGGAAACG...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR GCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGATTCTTAGCTGGCAGGTaGCTCAGCACTATCAGCATG +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRFLAGR*LSTISM
Trigger: CATGCTGATAGTGCTGAGGCACCTGCCAGCTAAGAA...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358186.6
CDS-3UTR GCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCCTTTTGAATGCAGATaGTTGGCCAATGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVPFECR*LANENP
Trigger: TGGGTTCTCATTGGCCAAGCATCTGCATTCAAAAGG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTCATCAAAGTACTTCTTaGCGTAGTCCTTGCGCACGA +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGHQSTS*RSPCAR
Trigger: TCGTGCGCAAGGACTACGGCAAGAAGTACTTTGATG...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCAAAGTACTTCTTaGCGTAGTCCTTGCGCACGA +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWHQSTS*RSPCAR
Trigger: TCGTGCGCAAGGACTACGGCAAGAAGTACTTTGATG...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGACCAAGTCACTCACTATaGAAAGAAGTCATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGPSHSL*KEVIPS
Trigger: AGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGG...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAAAAAGGGTTATTTCATaGATCCTCTTTAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEKRVIS*ILFKLQ
Trigger: TTGCAGCTTAAAGAGGATGCATGAAATAACCCTTTT...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR GCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTACTGTTTCTGAAGGGTaGTGCTTGCTTCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVTVSEG*CLLLCS
Trigger: GGAACAAAGAAGCAAGCAGCACCCTTCAGAAACAGT...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGTGGTTCAGGACATTTaGAGCGTCACAAAAGATCCT +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVVVQDI*SVTKDP
Trigger: AGGATCTTTTGTGACGCTGCAAATGTCCTGAACCAC...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392379.6
ENST00000617317.2
CDS-3UTR CCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAAGACCCTGCCTCAAGTaGCATCACTTCTTAATTGAA +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGRPCLK*HHFLIE
Trigger: TTCAATTAAGAAGTGATGCCACTTGAGGCAGGGTCT...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
3UTR CAA 72 bp GCACAAGAGGTATCTAAATGTCCTTCCTCTTGGGACTaGGTTAACCCTGTTGCTATCATTCAGCTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: AQEVSKCPSSWD*VNPVAIIQLFS
Trigger: TGAGAAGAGCTGAATGATAGCAACAGGGTTAACCAAGTCCCAAGAGGAAGGACATTTAGATACCTCTTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAACAGATGCTTGGCCAATaGGAACCCAAATCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQQMLGQ*EPKSRV
Trigger: GACTCTGGATTTGGGTTCTCATTGGCCAAGCATCTG...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCACAAGGAAGCCTTTTaGATGCAGATGCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHHKEAF*MQMLGQ
Trigger: TTGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGACACAAGGAAGCCTTTTaGATGCAGATGCTTGGCCAA +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRHKEAF*MQMLGQ
Trigger: TTGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTG...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTTGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCACACAAGTCTATCCTaGGTCCTAAAAGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWHTSLS*VLKEDG
Trigger: TCCATCCTCTTTTAGGACTCAGGATAGACTTGTGTG...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp ATTTTAGGCCGGGTACATATTGTCTCAGAATACTCACTACATTTTCCAGCCTTCCCCAAAGCTTGTGAATaGCTCCATCCAAAGAGCATC +
Preference number: 4 (lower is better)
Translates to: ILGRVHIVSEYSLHFPAFPKACE*LHPKSI
Trigger: GATGCTCTTTGGATGGAGTCATTCACAAGCTTTGGG...GAAGGCTGGAAAATGTAGTGAGTATTCTGAGACAATATGTACCCGGCCTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR GCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTAGGAAGCCTTTTGAATaGAGATGCTTGGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGRKPFE*RCLANE
Trigger: CTCATTGGCCAAGCATCTGCATTCAAAAGGCTTCCT...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATAGGAAGCCTTTTGAATaGAGATGCTTGGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANRKPFE*RCLANE
Trigger: CTCATTGGCCAAGCATCTGCATTCAAAAGGCTTCCT...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAACCAAAGGTTCACTTCTaGCACCTGCTTGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQPKVHF*HLLVGL
Trigger: GAGACCTACAAGCAGGTGGCAGAAGTGAACCTTTGG...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCATCAAAGTACTTCTTaGCGTAGTCCTTGCGCACGA +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHHQSTS*RSPCAR
Trigger: TCGTGCGCAAGGACTACGGCAAGAAGTACTTTGATG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCCAAGTCACTCACTATaGAAAGAAGTCATTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVPSHSL*KEVIPS
Trigger: AGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGG...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp AAACACGTGTCTTGCTTTAATGCAGTCTTCCACCTGGTGGCCCTTCAAATGCCCGCATCCTCTTTAAGCTaGAAATGCTTCATTTACAAA +
Preference number: 4 (lower is better)
Translates to: KHVSCFNAVFHLVALQMPASSLS*KCFIYK
Trigger: TTTGTAAATGAAGCATTTGCAGCTTAAAGAGGATGC...GGGCATTTGAAGGGCCACCAGGTGGAAGACTGCATTAAAGCAAGACACGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAAGTAGGTCTCCATCTTaGCGATCTTTTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLSRSPS*RSFHQS
Trigger: ACTTTGATGAAAAGATCGCCAAGATGGAGACCTACT...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTAGACCCTGCCTCAAGTaGCATCACTTCTTAATTGAA +
Preference number: 4 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVRPCLK*HHFLIE
Trigger: TTCAATTAAGAAGTGATGCCACTTGAGGCAGGGTCT...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATGGATCTTGTGAGGTCTaGATCTTGCAGGGTCTATAT +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANGSCEV*ILQGLY
Trigger: ATATAGACCCTGCAAGATCCAGACCTCACAAGATCC...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR TCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAACTCTTAATTCTCAGTTaGCAGGGCGTATTGACACCC +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQLLILS*QGVLTP
Trigger: GGGTGTCAATACGCCCTGTCAACTGAGAATTAAGAG...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358186.6
CDS-3UTR GCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATAGGAAGCCTTTTGAATaGAGATGCTTGGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHRKPFE*RCLANE
Trigger: CTCATTGGCCAAGCATCTGCATTCAAAAGGCTTCCT...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR GCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAACTGTTTCTGAAGGGTaGTGCTTGCTTCTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRTVSEG*CLLLCS
Trigger: GGAACAAAGAAGCAAGCAGCACCCTTCAGAAACAGT...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAAGATTCTCGGGCAAATaGATCCAAAACAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRRFSGK*IQNSPG
Trigger: TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCT...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATAGACCCTGCCTCAAGTaGCATCACTTCTTAATTGAA +
Preference number: 4 (lower is better)
Translates to: VSQKILGQMDPKQSWNANRPCLK*HHFLIE
Trigger: TTCAATTAAGAAGTGATGCCACTTGAGGCAGGGTCT...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTACAAAAGCATCCTATaGTTATGTAACTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGYKSIL*LCNCSG
Trigger: GCCGCTGCAGTTACATAACCATAGGATGCTTTTGTA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGTACAAAAGCATCCTATaGTTATGTAACTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWYKSIL*LCNCSG
Trigger: GCCGCTGCAGTTACATAACCATAGGATGCTTTTGTA...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATCTCATTCTCAGACAGTaGACAGAGAGCCTCTTTGTT +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHLILRQ*TESLFV
Trigger: AACAAAGAGGCTCTCTGTCCACTGTCTGAGAATGAG...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR TCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATTGGATAATCAAGAGTTaGCTATATGGGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHWIIKS*LYGFLP
Trigger: AGGGAGGAACCCATATAGTCAACTCTTGATTATCCA...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR TCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGTGTCCTTTTCATTCATaGGACTGGCTTAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWCPFHS*DWLKDQ
Trigger: TTGATCCTTAAGCCAGTCTCATGAATGAAAAGGACA...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR TCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGATGGCAGCTTTCAAACTaGAACCCAAGAAGTGATCAT +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRWQLSN*NPRSDH
Trigger: ATGATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCA...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGCATCCTCTTTAAGCTaGAAATGCTTCATTTACAAA +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLASSLS*KCFIYK
Trigger: TTTGTAAATGAAGCATTTGCAGCTTAAAGAGGATGC...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR GCA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAGCATCCTCTTTAAGCTaGAAATGCTTCATTTACAAA +
Preference number: 4 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGASSLS*KCFIYK
Trigger: TTTGTAAATGAAGCATTTGCAGCTTAAAGAGGATGC...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTAAAAGGGTTATTTCATaGATCCTCTTTAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSKRVIS*ILFKLQ
Trigger: TTGCAGCTTAAAGAGGATGCATGAAATAACCCTTTT...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR GCA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAAAAAGGGTTATTTCATaGATCCTCTTTAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLKRVIS*ILFKLQ
Trigger: TTGCAGCTTAAAGAGGATGCATGAAATAACCCTTTT...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS-3UTR CCA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGAGTAGGTCTCCATCTTaGCGATCTTTTCATCAAAGT +
Preference number: 4 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWSRSPS*RSFHQS
Trigger: ACTTTGATGAAAAGATCGCCAAGATGGAGACCTACT...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATTACAAAAGCATCCTATaGTTATGTAACTGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHYKSIL*LCNCSG
Trigger: GCCGCTGCAGTTACATAACCATAGGATGCTTTTGTA...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR TCA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATGTCCTTTTCATTCATaGGACTGGCTTAAGGATCAA +
Preference number: 4 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQCPFHS*DWLKDQ
Trigger: TTGATCCTTAAGCCAGTCTCATGAATGAAAAGGACA...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATTCCGAGCATCCTCTTTAAGCTaGAAATGCTTCATTTACAAA +
Preference number: 4 (lower is better)
Translates to: NKLQHGHKFAQHVKVQFRASSLS*KCFIYK
Trigger: TTTGTAAATGAAGCATTTGCAGCTTAAAGAGGATGC...TCGGAATTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR GCA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGCATCCTCTTTAAGCTaGAAATGCTTCATTTACAAA +
Preference number: 4 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHASSLS*KCFIYK
Trigger: TTTGTAAATGAAGCATTTGCAGCTTAAAGAGGATGC...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
ENST00000651856.1
CDS GCA 90 bp CCAGGGCCTCCTCCTGCCCAAAACCAAATGGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCTCTCGCCTTCACCCGGCGCCGCGCA +
Preference number: 5 (lower is better)
Translates to: PGPPPAQNQMGRGLR*RGLAEALAFTRRRA
Trigger: TGCGCGGCGCCGGGTGAAGGCGAGAGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCCCATTTGGTTTTGGGCAGGAGGAGGCCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445160.2
ENST00000626799.2
CDS GCA 90 bp CCGCAGGGTCTTTCTGGAAGCCCCTCCACCAGCACTCCTGCGGCCTaGGGCCTCCGCCACCCGGACGCTTCTACACGCGAAGCGCGCGCT +
Preference number: 5 (lower is better)
Translates to: PQGLSGSPSTSTPAA*GLRHPDASTREARA
Trigger: AGCGCGCGCTTCGCGTGTAGAAGCGTCCGGGTGGCGGAGGCCGCAGGCCGCAGGAGTGCTGGTGGAGGGGCTTCCAGAAAGACCCTGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392378.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS GCA 90 bp GGCGCTGCCGCAGGGTCTTTCTGGAAGCCCCTCCACCAGCACTCCTaGGGCCTGCGGCCTCCGCCACCCGGACGCTTCTACACGCGAAGC +
Preference number: 5 (lower is better)
Translates to: GAAAGSFWKPLHQHS*GLRPPPPGRFYTRS
Trigger: GCTTCGCGTGTAGAAGCGTCCGGGTGGCGGAGGCCGCAGGCCGCAGGAGTGCTGGTGGAGGGGCTTCCAGAAAGACCCTGCGGCAGCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000392378.6
ENST00000432819.5
ENST00000441275.5
ENST00000468710.1
ENST00000612690.3
ENST00000617317.2
ENST00000626468.2
ENST00000629914.1
ENST00000631323.2
ENST00000651856.1
CDS GCA 90 bp AGTTCCTCCCGGTGGTTCCAAAACCAAATGGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCTCTCGCCTTCACCCGGCGCCGCGCA +
Preference number: 5 (lower is better)
Translates to: SSSRWFQNQMGRGLR*RGLAEALAFTRRRA
Trigger: TGCGCGGCGCCGGGTGAAGGCGAGAGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCCCATTTGGTTTTGGAACCACCGGGAGGAACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000392378.6
ENST00000468710.1
ENST00000492681.1
ENST00000612690.3
ENST00000626925.1
ENST00000629914.1
ENST00000651856.1
CDS-3UTR CAA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCGTGACCAGGACAGCTTaGCTGCCAACCGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGVTRTA*LPTGSA
Trigger: GGCGGAGCCGGTTGGCAGCAAAGCTGTCCTGGTCAC...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS GCA 90 bp ATTTCCAGGCTGACTGGCCAAAACCAAATGGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCTCTCGCCTTCACCCGGCGCCGCGCA +
Preference number: 5 (lower is better)
Translates to: ISRLTGQNQMGRGLR*RGLAEALAFTRRRA
Trigger: TGCGCGGCGCCGGGTGAAGGCGAGAGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCCCATTTGGTTTTGGCCAGTCAGCCTGGAAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000392379.6
ENST00000432819.5
ENST00000441275.5
ENST00000617317.2
ENST00000626468.2
ENST00000630698.2
ENST00000631323.2
CDS GCA 90 bp CAAGCAATAGTGGGCGTCCAAAACCAAATGGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCTCTCGCCTTCACCCGGCGCCGCGCA +
Preference number: 5 (lower is better)
Translates to: QAIVGVQNQMGRGLR*RGLAEALAFTRRRA
Trigger: TGCGCGGCGCCGGGTGAAGGCGAGAGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCCCATTTGGTTTTGGACGCCCACTATTGCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446746.5
ENST00000625957.2
CDS CCA 90 bp CATGCTGCTGGAGACGCCGGCAGAAAAGCCGAGAGGGAGACTCCCTaGGGTCTGGGCGCGATCGGCCATCCTACCCTTACCCCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: HAAGDAGRKAERETP*GLGAIGHPTLTPLR
Trigger: CCGCAGCGGGGTAAGGGTAGGATGGCCGATCGCGCCCAGACCCCAGGGAGTCTCCCTCTCGGCTTTTCTGCCGGCGTCTCCAGCAGCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS-3UTR CAA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCGCGGAGATGGTGCCATaGCACTCCAGCCTAGGGGAC +
Preference number: 5 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGAEMVP*HSSLGD
Trigger: GTCCCCTAGGCTGGAGTGCAATGGCACCATCTCCGC...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCAGGCTGTCCAGCTCCTaGACCCCATCATGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGRLSSS*TPSWPL
Trigger: CAAAGGCCATGATGGGGTCAAGGAGCTGGACAGCCT...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCATTGACGACGCGGCCTTaGGCCCTTCGGATGAGGGGG +
Preference number: 5 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPLTTRP*ALRMRG
Trigger: CCCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAA...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp CACCGCGCCCGGCCACGCACTCTGGTAAAGACGAAAACTACGTCCTGCGCCCCGCTCTCGGGAATGGCCTaGACAGAGCCGACTTCCCGC +
Preference number: 5 (lower is better)
Translates to: HRARPRTLVKTKTTSCAPLSGMA*TEPTSR
Trigger: GCGGGAAGTCGGCTCTGTCAAGGCCATTCCCGAGAG...CGGGGCGCAGGACGTAGTTTTCGTCTTTACCAGAGTGCGTGGCCGGGCGCGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAAGGCAGGAGAACCGCTaGAACCAGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPRQENR*NQGGGG
Trigger: ACCTCCGCCTCCCTGGTTCAAGCGGTTCTCCTGCCT...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS TCA 90 bp CCCAGTTCCTCCCGGTGGTTCTGGCTTCGGTCTGGGCTCGGCCTTTaGCTACGACGTGACCTTGAGGACGGTTCCTTCCCTTCGTGGGGC +
Preference number: 5 (lower is better)
Translates to: PSSSRWFWLRSGLGL*LRRDLEDGSFPSWG
Trigger: GCCCCACGAAGGGAAGGAACCGTCCTCAAGGTCACGTCGTAGTCAAAGGCCGAGCCCAGACCGAAGCCAGAACCACCGGGAGGAACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445160.2
ENST00000626799.2
CDS-3UTR CAA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCACCCCATCATGGCCTTaGTCCTTCATCAAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGTPSWP*SFIKQP
Trigger: TGGCTGCTTGATGAAGGACAAAGGCCATGATGGGGT...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GCCGCTCCTTCGCCACGTGCAAGGCGAGGTTCTGACTGCGCTGAGTCCAGCCCAAGCATGCTGCTGATATaGACGACGCGGCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: AAPSPRARRGSDCAESSPSMLLI*TTRPLA
Trigger: GGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCT...TGGGCTGGACTCAGCGCAGTCAGAACCTCGCCTTGCACGTGGCGAAGGAGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCGGGGAGCGGGCCGGGTaGGCCATGCGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTGERAG*AMRPSM
Trigger: CATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCC...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCACGGGAGGCAGCTGAATaGCCCATTGTGAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPREAAE*PIVRPF
Trigger: GAAGGGCCTCACAATGGGCAATTCAGCTGCCTCCCG...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp GTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCCTCAGGGGAAACCCCCAACCCTCACCTGCCTTaGGGCAGCCTCCACACCCTG +
Preference number: 5 (lower is better)
Translates to: VPLHSITTRSLQSSGETPNPHLP*GSLHTL
Trigger: CAGGGTGTGGAGGCTGCCCAAAGGCAGGTGAGGGTT...GGGGGTTTCCCCTGAGGACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS TCA 90 bp GTGGGGCCTGGGTCCCCTTCAGTAAGATGCGCCGGCAGGAAACGATaGGTCGTTTCACCTGGGAGCTGCAGGGCCGCGTGTTTAACCCAG +
Preference number: 5 (lower is better)
Translates to: VGPGSPSVRCAGRKR*VVSPGSCRAACLTQ
Trigger: CTGGGTTAAACACGCGGCCCTGCAGCTCCCAGGTGAAACGACTCATCGTTTCCTGCCGGCGCATCTTACTGAAGGGGACCCAGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000445160.2
ENST00000476764.2
ENST00000626799.2
ENST00000627844.1
CDS CCA 90 bp CCCTTCAGTAAGATGCGCCGGCAGGAAACGATGAGTCGTTTCACCTaGGAGCTGCAGGGCCGCGTGTTTAACCCAGGGCCTCCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: PFSKMRRQETMSRFT*ELQGRVFNPGPPPA
Trigger: GGCAGGAGGAGGCCCTGGGTTAAACACGCGGCCCTGCAGCTCCCAGGTGAAACGACTCATCGTTTCCTGCCGGCGCATCTTACTGAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445160.2
ENST00000476764.2
ENST00000626799.2
ENST00000627844.1
CDS CCA 90 bp TCCCACCCTGAGGCAGACCCTGAGGACTCCTGTCAAGGCAGGAGCTaGCCTCAAGTCCCAGCCAAAGCCTCAGGCATACTGGCAACTGCC +
Preference number: 5 (lower is better)
Translates to: SHPEADPEDSCQGRS*PQVPAKASGILATA
Trigger: GGCAGTTGCCAGTATGCCTGAGGCTTTGGCTGGGACTTGAGGCCAGCTCCTGCCTTGACAGGAGTCCTCAGGGTCTGCCTCAGGGTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS-3UTR CAA 90 bp TGCCTTCGGACACAGCAGCCAGGCCGGAGGCTCGATGGTCTAAAGTTTGGCTCTTTGACGACGCGGCCTTaGGCCCTTCGGATGAGGGGG +
Preference number: 5 (lower is better)
Translates to: CLRTQQPGRRLDGLKFGSLTTRP*ALRMRG
Trigger: CCCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAA...AGAGCCAAACTTTAGACCATCGAGCCTCCGGCCTGGCTGCTGTGTCCGAAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp TTCCCCTGCCCAGCCCTGAGGGCTGTGGGAAGTAGGTGCTGGTGGAGGTTGTCTGCCTCTACCCCGAACTaGGTGATGCAGTACGGGGAG +
Preference number: 5 (lower is better)
Translates to: FPCPALRAVGSRCWWRLSASTPN*VMQYGE
Trigger: CTCCCCGTACTGCATCACCAAGTTCGGGGTAGAGGC...AGACAACCTCCACCAGCACCTACTTCCCACAGCCCTCAGGGCTGGGCAGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp GCCCCTCAGAATGTGACACTAATATGGCACTGGGACCATCGGCAGCTCCTCCGCGGCCCCTGTGCCTGGTaGCTGTCTGGCCAACCCAAC +
Preference number: 5 (lower is better)
Translates to: APQNVTLIWHWDHRQLLRGPCAW*LSGQPN
Trigger: GTTGGGTTGGCCAGACAGCAACCAGGCACAGGGGCC...GCGGAGGAGCTGCCGATGGTCCCAGTGCCATATTAGTGTCACATTCTGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS TCA 90 bp CAGATTTCCAGGCTGACTGGCTGGCTTCGGTCTGGGCTCGGCCTTTaGCTACGACGTGACCTTGAGGACGGTTCCTTCCCTTCGTGGGGC +
Preference number: 5 (lower is better)
Translates to: QISRLTGWLRSGLGL*LRRDLEDGSFPSWG
Trigger: GCCCCACGAAGGGAAGGAACCGTCCTCAAGGTCACGTCGTAGTCAAAGGCCGAGCCCAGACCGAAGCCAGCCAGTCAGCCTGGAAATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS-3UTR CAA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCGCAATAGTGGGCGTCTaGCTCCATTTTCTCTATCAC +
Preference number: 5 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGAIVGV*LHFLYH
Trigger: GTGATAGAGAAAATGGAGCAAGACGCCCACTATTGC...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCGTGACCAGGACAGCTTaGCTGCCAACCGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: KASYGYVTAAATKRPPLGVTRTA*LPTGSA
Trigger: GGCGGAGCCGGTTGGCAGCAAAGCTGTCCTGGTCAC...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp ACGGCTTCAGGCTCCCGAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGAGTGACCAGGACAGCTTaGCTGCCAACCGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: TASGSRGEQRYPPIFTDRVTRTA*LPTGSA
Trigger: GGCGGAGCCGGTTGGCAGCAAAGCTGTCCTGGTCAC...TCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTCGGGAGCCTGAAGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp CGGCAGGTCCGCCCAGGGAGAGGCGGAAACGCGGAGTCTGATTCGAAGGCGGGCACACAAGGAAGCCTTTaGAATGCAGATGCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: RQVRPGRGGNAESDSKAGTQGSL*NADAWP
Trigger: TGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTGT...GCCCGCCTTCGAATCAGACTCCGCGTTTCCGCCTCTCCCTGGGCGGACCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GTACCTCCATTGGAACGAGAGCCCATCAGTCCCGCCAGCCTGCAGGGAAGAGTCGCCTCTACCCCGAACTaGGTGATGCAGTACGGGGAG +
Preference number: 5 (lower is better)
Translates to: VPPLEREPISPASLQGRVASTPN*VMQYGE
Trigger: CTCCCCGTACTGCATCACCAAGTTCGGGGTAGAGGC...GACTCTTCCCTGCAGGCTGGCGGGACTGATGGGCTCTCGTTCCAATGGAGGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAGTGCTGCTTGCTTCTTaGTTCCCGGTTTCCGAAGCG +
Preference number: 5 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPVLLAS*FPVSEA
Trigger: CGCTTCGGAAACCGGGAACAAAGAAGCAAGCAGCAC...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAACAGTTTGCACAGGTTaGCAGAGCCAGGCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPTVCTG*QSQALF
Trigger: GAACAGGGCCTGGCTCTGCAAACCTGTGCAAACTGT...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTATGTCTGGCAGCAGAGTaGAGCGGCACTTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVCLAAE*SGTSRP
Trigger: GGGCCTGGAAGTGCCGCTCAACTCTGCTGCCAGACA...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp ATGGAATCGAGCCTCTCACTTCCCGGCCCAAGTCATGCCCACGGTTACCCTGTGCCACCACGCCCGCACTaGTCTGGCAGCAGAGTTGAG +
Preference number: 5 (lower is better)
Translates to: MESSLSLPGPSHAHGYPVPPRPH*SGSRVE
Trigger: CTCAACTCTGCTGCCAGACAAGTGCGGGCGTGGTGG...CACAGGGTAACCGTGGGCATGACTTGGGCCGGGAAGTGAGAGGCTCGATTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS CCA 90 bp AAGGCAGGAGCTGGCCTCAAGTCCCAGCCAAAGCCTCAGGCATACTaGCAACTGCCCATGGGCCTGGCCCACCAGCATGCGGTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: KAGAGLKSQPKPQAY*QLPMGLAHQHAVLF
Trigger: AAAAAGAACCGCATGCTGGTGGGCCAGGCCCATGGGCAGTTGCCAGTATGCCTGAGGCTTTGGCTGGGACTTGAGGCCAGCTCCTGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS-3UTR CAA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCGTGACCAGGACAGCTTaGCTGCCAACCGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIVTRTA*LPTGSA
Trigger: GGCGGAGCCGGTTGGCAGCAAAGCTGTCCTGGTCAC...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAGCCTCTACCCCGAACTaGGTGATGCAGTACGGGGAG +
Preference number: 5 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVASTPN*VMQYGE
Trigger: CTCCCCGTACTGCATCACCAAGTTCGGGGTAGAGGC...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAGTGACCAGGACAGCTTaGTCACCGGCTCCGCCGCAC +
Preference number: 5 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAVTRTA*SPAPPH
Trigger: GTGCGGCGGAGCCGGTGACAAAGCTGTCCTGGTCAC...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441275.5
ENST00000631323.2
CDS TCA 90 bp TGCAGGGTGACTCTGCATCAGCTGACTACAGGCAGATTTCCAGGCTaGCTGGCTGGCTTCGGTCTGGGCTCGGCCTTTGACTACGACGTG +
Preference number: 5 (lower is better)
Translates to: CRVTLHQLTTGRFPG*LAGFGLGSAFDYDV
Trigger: CACGTCGTAGTCAAAGGCCGAGCCCAGACCGAAGCCAGCCAGTCAGCCTGGAAATCTGCCTGTAGTCAGCTGATGCAGAGTCACCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS GCA 90 bp GAGCTGGCCTCAAGTCCCAGCCAAAGCCTCAGGCATACTGGCAACTaGCCATGGGCCTGGCCCACCAGCATGCGGTTCTTTTTAATCCTG +
Preference number: 5 (lower is better)
Translates to: ELASSPSQSLRHTGN*PWAWPTSMRFFLIL
Trigger: CAGGATTAAAAAGAACCGCATGCTGGTGGGCCAGGCCCATGGGCAGTTGCCAGTATGCCTGAGGCTTTGGCTGGGACTTGAGGCCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS-3UTR CAA 90 bp TGCGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTGCCTGCGCAATAGTGGGCGTCTaGCTCCATTTTCTCTATCAC +
Preference number: 5 (lower is better)
Translates to: CGLGGSWLSCLPACLPACAIVGV*LHFLYH
Trigger: GTGATAGAGAAAATGGAGCAAGACGCCCACTATTGC...GCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAAGGCTGTCCAGCTCCTaGACCCCATCATGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVRLSSS*TPSWPL
Trigger: CAAAGGCCATGATGGGGTCAAGGAGCTGGACAGCCT...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTGGGGAGCGGGCCGGGTaGGCCATGCGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSGERAG*AMRPSM
Trigger: CATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCC...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAGCGGAGATGGTGCCATaGCACTCCAGCCTAGGGGAC +
Preference number: 5 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAAEMVP*HSSLGD
Trigger: GTCCCCTAGGCTGGAGTGCAATGGCACCATCTCCGC...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCGCGGAGATGGTGCCATaGCACTCCAGCCTAGGGGAC +
Preference number: 5 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIAEMVP*HSSLGD
Trigger: GTCCCCTAGGCTGGAGTGCAATGGCACCATCTCCGC...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCAGGCAGGAGAACCGCTaGAACCAGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIRQENR*NQGGGG
Trigger: ACCTCCGCCTCCCTGGTTCAAGCGGTTCTCCTGCCT...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCCGGGAGGCAGCTGAATaGCCCATTGTGAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: KASYGYVTAAATKRPPLGREAAE*PIVRPF
Trigger: GAAGGGCCTCACAATGGGCAATTCAGCTGCCTCCCG...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GTGCCCCTACACAGCATCACGACAAGGTCCCTGCAGTCCTCAGGGGAAACCCCCATTTTCCAGCCTTCCTaGCAGCCAGGTAAGGCCATG +
Preference number: 5 (lower is better)
Translates to: VPLHSITTRSLQSSGETPIFQPS*QPGKAM
Trigger: CATGGCCTTACCTGGCTGCAAGGAAGGCTGGAAAAT...GGGGGTTTCCCCTGAGGACTGCAGGGACCTTGTCGTGATGCTGTGTAGGGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp ATGGAATCGAGCCTCTCACTTCCCGGCCCAAGTCATGCCCACGGTTACCCTGTGCAGGGGAGCCTCTGCTaGCTCATGTCGGCTCCTATA +
Preference number: 5 (lower is better)
Translates to: MESSLSLPGPSHAHGYPVQGSLC*LMSAPI
Trigger: TATAGGAGCCGACATGAGCAAGCAGAGGCTCCCCTG...CACAGGGTAACCGTGGGCATGACTTGGGCCGGGAAGTGAGAGGCTCGATTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp TGCGGACTAGGAGGAAGCTGGCTGTCCTGCTTGCCTGCCTGCCTGCCTGCCTGCGAGGAGATGGAAATCTaGTCAAATGGGAGACCTGAG +
Preference number: 5 (lower is better)
Translates to: CGLGGSWLSCLPACLPACEEMEI*SNGRPE
Trigger: CTCAGGTCTCCCATTTGACAAGATTTCCATCTCCTC...GCAGGCAGGCAGGCAGGCAGGCAAGCAGGACAGCCAGCTTCCTCCTAGTCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp CCAGCCTGCAGGGAAGAGTCTGATGCCCCTCGTGACATCACCGAGCTCTCCCGACCCATTGTACCTCCATaGGAACGAGAGCCCATCAGT +
Preference number: 5 (lower is better)
Translates to: PACREESDAPRDITELSRPIVPP*EREPIS
Trigger: ACTGATGGGCTCTCGTTCCAATGGAGGTACAATGGG...TCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS TCA 90 bp TCTCTTCCCAGGAGGAGCAGCAGGCCACTCCCCACCCGTCATGGCTaGCACTTCCACGTCATCTTCGAGACCATAGCCACTGATCCTTCT +
Preference number: 5 (lower is better)
Translates to: SLPRRSSRPLPTRHG*HFHVIFETIATDPS
Trigger: AGAAGGATCAGTGGCTATGGTCTCGAAGATGACGTGGAAGTGTCAGCCATGACGGGTGGGGAGTGGCCTGCTGCTCCTCCTGGGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483920.1
ENST00000626126.1
CDS CCA 90 bp GCCTCAAGTCCCAGCCAAAGCCTCAGGCATACTGGCAACTGCCCATaGGCCTGGCCCACCAGCATGCGGTTCTTTTTAATCCTGAGCACT +
Preference number: 5 (lower is better)
Translates to: ASSPSQSLRHTGNCP*AWPTSMRFFLILST
Trigger: AGTGCTCAGGATTAAAAAGAACCGCATGCTGGTGGGCCAGGCCCATGGGCAGTTGCCAGTATGCCTGAGGCTTTGGCTGGGACTTGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS-3UTR CAA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCAGCATGCTGCTGATATaGACGACGCGGCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: KASYGYVTAAATKRPPLGSMLLI*TTRPLA
Trigger: GGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCT...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGGGGAGCGGGCCGGGTaGGCCATGCGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVGERAG*AMRPSM
Trigger: CATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCC...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTGCCTCTACCCCGAACTaGGTGATGCAGTACGGGGAG +
Preference number: 5 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCASTPN*VMQYGE
Trigger: CTCCCCGTACTGCATCACCAAGTTCGGGGTAGAGGC...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GAGTCACTGGCTGCTGGCTGGCCAGTCACACAGCACCATGGACATGCAGAGGTAGGAGGACAGTGGTGTTaGGCTTCGGTCCCAACATAC +
Preference number: 5 (lower is better)
Translates to: ESLAAGWPVTQHHGHAEVGGQWC*ASVPTY
Trigger: GTATGTTGGGACCGAAGCCAAACACCACTGTCCTCC...TACCTCTGCATGTCCATGGTGCTGTGTGACTGGCCAGCCAGCAGCCAGTGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCACGGGAGGCAGCTGAATaGCCCATTGTGAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAREAAE*PIVRPF
Trigger: GAAGGGCCTCACAATGGGCAATTCAGCTGCCTCCCG...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTCGGGAGGCAGCTGAATaGCCCATTGTGAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCREAAE*PIVRPF
Trigger: GAAGGGCCTCACAATGGGCAATTCAGCTGCCTCCCG...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCACGGGGGTTCACCATGTaGGCCACACTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYARGFTM*ATLVSN
Trigger: GTTCGAGACCAGTGTGGCCAACATGGTGAACCCCCG...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS TCA 90 bp GGACATTGGAGCTGCTGGGACAGGTATTTCCATTCTGAGCAAAGATaGACACGTGGGGCAGGTTCAGGGGCAGGAGGGAGCTCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: GHWSCWDRYFHSEQR*TRGAGSGAGGSSLS
Trigger: GGAAAGGGAGCTCCCTCCTGCCCCTGAACCTGCCCCACGTGTTCATCTTTGCTCAGAATGGAAATACCTGTCCCAGCAGCTCCAATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455876.1
CDS TCA 90 bp GCTGGACGGTTCTCAATCGGTCACTGTTTAGGCTGTCCAGCTCCTTaGCCCCATCATGGCCTTTGTCCTGGGGAGGAGAGAAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: AGRFSIGHCLGCPAP*PHHGLCPGEERRAA
Trigger: AGCAGCTCTTCTCTCCTCCCCAGGACAAAGGCCATGATGGGGTCAAGGAGCTGGACAGCCTAAACAGTGACCGATTGAGAACCGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS TCA 90 bp AGTCTTCTGCAGCATCGAGCAGCCTCTGCCCTGTGCTGTGGAATCTaGCTGTGGCTCCCTGTGTCACTGGATAAGCCAGCACAATGGCAC +
Preference number: 5 (lower is better)
Translates to: SLLQHRAASALCCGI*LWLPVSLDKPAQWH
Trigger: GTGCCATTGTGCTGGCTTATCCAGTGACACAGGGAGCCACAGTCAGATTCCACAGCACAGGGCAGAGGCTGCTCGATGCTGCAGAAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS GCA 90 bp CCAGGACATTTGCAGCGTCACAAAAGATCCTGTCAGCGCGAGGCCTaGAGGCGGCCCTCCATAGTGAAATATGTGCTTCTGCAACCCCTC +
Preference number: 5 (lower is better)
Translates to: PGHLQRHKRSCQREA*RRPSIVKYVLLQPL
Trigger: GAGGGGTTGCAGAAGCACATATTTCACTATGGAGGGCCGCCTGCAGGCCTCGCGCTGACAGGATCTTTTGTGACGCTGCAAATGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS GCA 90 bp AGGCCTCATCACCGCCTACACTGTCCATGTGTGAAAACCTCTGCCTaGTCAGAAAGTGTCCCCTCAAGGCCACCACCACCTCTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: RPHHRLHCPCVKTSA*SESVPSRPPPPLVA
Trigger: AGCAACCAGAGGTGGTGGTGGCCTTGAGGGGACACTTTCTGAGCAGGCAGAGGTTTTCACACATGGACAGTGTAGGCGGTGATGAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492681.1
ENST00000626925.1
CDS CCA 90 bp AGTCCCAGCCAAAGCCTCAGGCATACTGGCAACTGCCCATGGGCCTaGCCCACCAGCATGCGGTTCTTTTTAATCCTGAGCACTGATGAC +
Preference number: 5 (lower is better)
Translates to: SPSQSLRHTGNCPWA*PTSMRFFLILSTDD
Trigger: GTCATCAGTGCTCAGGATTAAAAAGAACCGCATGCTGGTGGGCCAGGCCCATGGGCAGTTGCCAGTATGCCTGAGGCTTTGGCTGGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS-3UTR CAA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATGGGGAGCGGGCCGGGTaGGCCATGCGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: VSQKILGQMDPKQSWNANGERAG*AMRPSM
Trigger: CATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCC...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGGGGAGCGGGCCGGGTaGGCCATGCGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWGERAG*AMRPSM
Trigger: CATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp CGGCAGCTCCTCCGCCCTTCCCATCACAGCCCCGGAAGTCCCATTGTACCTCCAGTGGATAATCAAGAGTaGACTATATGGGTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: RQLLRPSHHSPGSPIVPPVDNQE*TIWVPP
Trigger: GGGAGGAACCCATATAGTCAACTCTTGATTATCCAC...TGGAGGTACAATGGGACTTCCGGGGCTGTGATGGGAAGGGCGGAGGAGCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGGCGGAGATGGTGCCATaGCACTCCAGCCTAGGGGAC +
Preference number: 5 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWAEMVP*HSSLGD
Trigger: GTCCCCTAGGCTGGAGTGCAATGGCACCATCTCCGC...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS GCA 90 bp TCAGGACATTTGCAGCGTCACAAAAGATCCTGTCAGCGCGAGGCCTaGAGGCGGCCCTCCATAGTGAAATATGTGCTTCTGCAACCCCTC +
Preference number: 5 (lower is better)
Translates to: SGHLQRHKRSCQREA*RRPSIVKYVLLQPL
Trigger: GAGGGGTTGCAGAAGCACATATTTCACTATGGAGGGCCGCCTGCAGGCCTCGCGCTGACAGGATCTTTTGTGACGCTGCAAATGTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000392379.6
ENST00000432819.5
ENST00000441275.5
ENST00000617317.2
ENST00000626468.2
ENST00000630698.2
ENST00000631323.2
CDS GCA 90 bp CTCCTGCCTGGCACATTATTCCGAATAATAAATGCCAGATCATGCTaGTGGAGACGCCGGCAGAAAAGCCGAGAGGGAGACTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: LLPGTLFRIINARSC*WRRRQKSREGDSLG
Trigger: CCCCAGGGAGTCTCCCTCTCGGCTTTTCTGCCGGCGTCTCCAGCAGCATGATCTGGCATTTATTATTCGGAATAATGTGCCAGGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS GCA 90 bp AACCCAGGGCCTCCTCCTGCCTGGCACATTATTCCGAATAATAAATaGCAGATCATGCTGCTGGAGACGCCGGCAGAAAAGCCGAGAGGG +
Preference number: 5 (lower is better)
Translates to: NPGPPPAWHIIPNNK*QIMLLETPAEKPRG
Trigger: CCCTCTCGGCTTTTCTGCCGGCGTCTCCAGCAGCATGATCTGGCATTTATTATTCGGAATAATGTGCCAGGCAGGAGGAGGCCCTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS GCA 90 bp AATCAGGCCTCATCACCGCCTACACTGTCCATGTGTGAAAACCTCTaGCTGCTCAGAAAGTGTCCCCTCAAGGCCACCACCACCTCTGGT +
Preference number: 5 (lower is better)
Translates to: NQASSPPTLSMCENL*LLRKCPLKATTTSG
Trigger: ACCAGAGGTGGTGGTGGCCTTGAGGGGACACTTTCTGAGCAGGCAGAGGTTTTCACACATGGACAGTGTAGGCGGTGATGAGGCCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492681.1
ENST00000626925.1
CDS CCA 90 bp TGGGAGCTGCAGGGCCGCGTGTTTAACCCAGGGCCTCCTCCTGCCTaGCACATTATTCCGAATAATAAATGCCAGATCATGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: WELQGRVFNPGPPPA*HIIPNNKCQIMLLE
Trigger: CTCCAGCAGCATGATCTGGCATTTATTATTCGGAATAATGTGCCAGGCAGGAGGAGGCCCTGGGTTAAACACGCGGCCCTGCAGCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS-3UTR CAA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGAGTGACCAGGACAGCTTaGCTGCCAACCGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRVTRTA*LPTGSA
Trigger: GGCGGAGCCGGTTGGCAGCAAAGCTGTCCTGGTCAC...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCACCCCATCATGGCCTTaGTCCTTCATCAAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: KASYGYVTAAATKRPPLGTPSWP*SFIKQP
Trigger: TGGCTGCTTGATGAAGGACAAAGGCCATGATGGGGT...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAAGGCTGTCCAGCTCCTaGACCCCATCATGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPRLSSS*TPSWPL
Trigger: CAAAGGCCATGATGGGGTCAAGGAGCTGGACAGCCT...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGCCTCTACCCCGAACTaGGTGATGCAGTACGGGGAG +
Preference number: 5 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEASTPN*VMQYGE
Trigger: CTCCCCGTACTGCATCACCAAGTTCGGGGTAGAGGC...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCGGAGGACAGTGGTGTTaGGCTTCGGTCCCAACATAC +
Preference number: 5 (lower is better)
Translates to: ALGSRRDGSFQTETQEVIGGQWC*ASVPTY
Trigger: GTATGTTGGGACCGAAGCCAAACACCACTGTCCTCC...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTGGAGGACAGTGGTGTTaGGCTTCGGTCCCAACATAC +
Preference number: 5 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCGGQWC*ASVPTY
Trigger: GTATGTTGGGACCGAAGCCAAACACCACTGTCCTCC...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAGTGCTGCTTGCTTCTTaGTTCCCGGTTTCCGAAGCG +
Preference number: 5 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAVLLAS*FPVSEA
Trigger: CGCTTCGGAAACCGGGAACAAAGAAGCAAGCAGCAC...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CCAGCCTGCAGGGAAGAGTCTGATGCCCCTCGTGACATCACCGAGCTCTCCCGACTATATCAACACAGTTaGCACAGGTTTGCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: PACREESDAPRDITELSRLYQHS*HRFAEP
Trigger: TGGCTCTGCAAACCTGTGCAAACTGTGTTGATATAG...TCGGGAGAGCTCGGTGATGTCACGAGGGGCATCAGACTCTTCCCTGCAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp GCTGCAGACTCTGGTGGCCTGTCCCCCTCAGGGTCTACCTGTCCTCAGGCCAAGACTTGGTTAACCCTGTaGCTATCATTCAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: AADSGGLSPSGSTCPQAKTWLTL*LSFSSS
Trigger: AGAAGAGCTGAATGATAGCAACAGGGTTAACCAAGT...CTTGGCCTGAGGACAGGTAGACCCTGAGGGGGACAGGCCACCAGAGTCTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp CTCCTCCCACATCTTCTTGGCGATGGCCTGAATGCTCTCAGGGCTGTAAAGGCTCCCTTCAAATGCCCCTaGGCGTGGAGCTCACATGAT +
Preference number: 5 (lower is better)
Translates to: LLPHLLGDGLNALRAVKAPFKCP*AWSSHD
Trigger: ATCATGTGAGCTCCACGCCAAGGGGCATTTGAAGGG...AGCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS CCA 90 bp CTGCCTGGCACATTATTCCGAATAATAAATGCCAGATCATGCTGCTaGAGACGCCGGCAGAAAAGCCGAGAGGGAGACTCCCTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: LPGTLFRIINARSCC*RRRQKSREGDSLGS
Trigger: AGACCCCAGGGAGTCTCCCTCTCGGCTTTTCTGCCGGCGTCTCCAGCAGCATGATCTGGCATTTATTATTCGGAATAATGTGCCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS-3UTR CAA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAGTGACCAGGACAGCTTaGCTGCCAACCGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGVTRTA*LPTGSA
Trigger: GGCGGAGCCGGTTGGCAGCAAAGCTGTCCTGGTCAC...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp ATGGAATCGAGCCTCTCACTTCCCGGCCCAAGTCATGCCCACGGTTACCCTGTGACACAAGGAAGCCTTTaGAATGCAGATGCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: MESSLSLPGPSHAHGYPVTQGSL*NADAWP
Trigger: TGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTGT...CACAGGGTAACCGTGGGCATGACTTGGGCCGGGAAGTGAGAGGCTCGATTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp TGTCTCAGAGCGCTTGGCGGCTTGAGGGGAACTCTAAAGACCATTCAGCCTGGTACCCCATCATGGCCTTaGTCCTTCATCAAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: CLRALGGLRGTLKTIQPGTPSWP*SFIKQP
Trigger: TGGCTGCTTGATGAAGGACAAAGGCCATGATGGGGT...ACCAGGCTGAATGGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCTGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGAGGCTGTCCAGCTCCTaGACCCCATCATGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWRLSSS*TPSWPL
Trigger: CAAAGGCCATGATGGGGTCAAGGAGCTGGACAGCCT...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AGGTGCTCTGTAACAAGGCACTGTCAGGCGCATCTTGCAAGAAGCCCTTGCCCATCGCTGCTGCAGACATaGAGCTGGACGGTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: RCSVTRHCQAHLARSPCPSLLQT*SWTVLN
Trigger: ATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGA...TGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGTGCCTTGTTACAGAGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp CTCCTCCCACATCTTCTTGGCGATGGCCTGAATGCTCTCAGGGCTGTAAAGGCTTCGCTGCTGCAGACATaGAGCTGGACGGTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: LLPHLLGDGLNALRAVKASLLQT*SWTVLN
Trigger: ATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGA...AGCCTTTACAGCCCTGAGAGCATTCAGGCCATCGCCAAGAAGATGTGGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGATTGACGACGCGGCCTTaGGCCCTTCGGATGAGGGGG +
Preference number: 5 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGLTTRP*ALRMRG
Trigger: CCCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAA...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTATTGACGACGCGGCCTTaGGCCCTTCGGATGAGGGGG +
Preference number: 5 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLLTTRP*ALRMRG
Trigger: CCCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAA...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAAGCATGCTGCTGATATaGACGACGCGGCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: PATPHPVCEGPSHSLCKESMLLI*TTRPLA
Trigger: GGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCT...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAGGGGAGCGGGCCGGGTaGGCCATGCGGCCCAGCATG +
Preference number: 5 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQGERAG*AMRPSM
Trigger: CATGCTGGGCCGCATGGCCAACCCGGCCCGCTCCCC...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAGGAGGACAGTGGTGTTaGGCTTCGGTCCCAACATAC +
Preference number: 5 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPGGQWC*ASVPTY
Trigger: GTATGTTGGGACCGAAGCCAAACACCACTGTCCTCC...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAGTGCTGCTTGCTTCTTaGTTCCCGGTTTCCGAAGCG +
Preference number: 5 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPVLLAS*FPVSEA
Trigger: CGCTTCGGAAACCGGGAACAAAGAAGCAAGCAGCAC...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AAAGCATCCTATGGTTATGTAACTGCAGCGGCCACCAAGCGTCCCCCTCTGGGCTCTGAAGGGTGCTGCTaGCTTCTTTGTTCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: KASYGYVTAAATKRPPLGSEGCC*LLCSRF
Trigger: AAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAGA...GCCCAGAGGGGGACGCTTGGTGGCCGCTGCAGTTACATAACCATAGGATGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCAACCCCATCATGGCCTTaGTCCTTCATCAAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPTPSWP*SFIKQP
Trigger: TGGCTGCTTGATGAAGGACAAAGGCCATGATGGGGT...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCATCGCTGCTGCAGACATaGAGCTGGACGGTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPSLLQT*SWTVLN
Trigger: ATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGA...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCTCGCTGCTGCAGACATaGAGCTGGACGGTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTSLLQT*SWTVLN
Trigger: ATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGA...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGAGCCTCTACCCCGAACTaGGTGATGCAGTACGGGGAG +
Preference number: 5 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRASTPN*VMQYGE
Trigger: CTCCCCGTACTGCATCACCAAGTTCGGGGTAGAGGC...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GCCCTGGGCAGTCGCAGGGATGGCAGCTTTCAAACTGAAACCCAAGAAGTGATCTCTGAAGGGTGCTGCTaGCTTCTTTGTTCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: ALGSRRDGSFQTETQEVISEGCC*LLCSRF
Trigger: AAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAGA...GATCACTTCTTGGGTTTCAGTTTGAAAGCTGCCATCCCTGCGACTGCCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTTCTGAAGGGTGCTGCTaGCTTCTTTGTTCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCSEGCC*LLCSRF
Trigger: AAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAGA...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp ACGGCTTCAGGCTCCCGAGGAGAGCAACGCTACCCTCCTATCTTCACTGACAGACTGGATTTTAAGTCCTaGTGCACGGATGGTCTCAAG +
Preference number: 5 (lower is better)
Translates to: TASGSRGEQRYPPIFTDRLDFKS*CTDGLK
Trigger: CTTGAGACCATCCGTGCACAAGGACTTAAAATCCAG...TCTGTCAGTGAAGATAGGAGGGTAGCGTTGCTCTCCTCGGGAGCCTGAAGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAATTGCCACGAACTCACTaGAGTAGTTGGGAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: PATPHPVCEGPSHSLCKELPRTH*SSWEGH
Trigger: GTGCCCCTCCCAACTACTCAAGTGAGTTCGTGGCAA...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS TCA 90 bp GTAGAACCAAGCAATAGTGGGCGTCTGCAAGAGAAAAGGAAGCCGTaGGTACAAGGACAGACTAGACAGACCCTCAGCCACACTGGCCTA +
Preference number: 5 (lower is better)
Translates to: VEPSNSGRLQEKRKP*VQGQTRQTLSHTGL
Trigger: TAGGCCAGTGTGGCTGAGGGTCTGTCTAGTCTGTCCTTGTACTCACGGCTTCCTTTTCTCTTGCAGACGCCCACTATTGCTTGGTTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477015.5
ENST00000495285.1
ENST00000625648.2
ENST00000627756.2
CDS GCA 90 bp TACCGCATTTCCATATCCCGAAGATCCTTCTGTAACTGTGCTACCTaGTCTCCCTCCCTCCACGCCAGGCTTCCAAGAACTCTATCCTGT +
Preference number: 5 (lower is better)
Translates to: YRISISRRSFCNCAT*SPSLHARLPRTLSC
Trigger: ACAGGATAGAGTTCTTGGAAGCCTGGCGTGGAGGGAGGGAGAGCAGGTAGCACAGTTACAGAAGGATCTTCGGGATATGGAAATGCGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483920.1
ENST00000626126.1
CDS-3UTR CAA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTCCTCTTAATTCTCAGTaGACAGGGCGTATTGACACC +
Preference number: 5 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCPLNSQ*TGRIDT
Trigger: GGTGTCAATACGCCCTGTCAACTGAGAATTAAGAGG...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358186.6
CDS-3UTR CAA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAACACAAGGAAGCCTTTaGAATGCAGATGCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYATQGSL*NADAWP
Trigger: TGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTGT...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAACCCCATCATGGCCTTaGTCCTTCATCAAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: PATPHPVCEGPSHSLCKETPSWP*SFIKQP
Trigger: TGGCTGCTTGATGAAGGACAAAGGCCATGATGGGGT...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
CDS-3UTR CAA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGTCGCTGCTGCAGACATaGAGCTGGACGGTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWSLLQT*SWTVLN
Trigger: ATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGA...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATTTGACGACGCGGCCTTaGGCCCTTCGGATGAGGGGG +
Preference number: 5 (lower is better)
Translates to: VSQKILGQMDPKQSWNANLTTRP*ALRMRG
Trigger: CCCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAA...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTTGACGACGCGGCCTTaGGCCCTTCGGATGAGGGGG +
Preference number: 5 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGLTTRP*ALRMRG
Trigger: CCCCCTCATCCGAAGGGCCAAAGGCCGCGTCGTCAA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp ACCAATTTGCCCCCAGTTATTCAGAGAAATCTTTCCAACCACCCTCAGCCTGCTAGCATGCTGCTGATATaGACGACGCGGCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: TNLPPVIQRNLSNHPQPASMLLI*TTRPLA
Trigger: GGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCT...AGCAGGCTGAGGGTGGTTGGAAAGATTTCTCTGAATAACTGGGGGCAAATTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTAGGCAGGAGAACCGCTaGAACCAGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVRQENR*NQGGGG
Trigger: ACCTCCGCCTCCCTGGTTCAAGCGGTTCTCCTGCCT...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GTGTGTGTACATGTGTGTAAGCACCACGTGAGGCAAGCAGGGACCCCAAATCCATCTGAAGGGTGCTGCTaGCTTCTTTGTTCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: VCVHVCKHHVRQAGTPNPSEGCC*LLCSRF
Trigger: AAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAGA...TGGATTTGGGGTCCCTGCTTGCCTCACGTGGTGCTTACACACATGTACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGACGGGAGGCAGCTGAATaGCCCATTGTGAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGREAAE*PIVRPF
Trigger: GAAGGGCCTCACAATGGGCAATTCAGCTGCCTCCCG...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAATGGGCGTCAGGACATTaGCAGCGTCACAAAAGATCC +
Preference number: 5 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEWASGH*QRHKRS
Trigger: GGATCTTTTGTGACGCTGCAAATGTCCTGACGCCCA...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441275.5
ENST00000631323.2
CDS-3UTR CAA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGTGACCAGGACAGCTTaGTCACCGGCTCCGCCGCAC +
Preference number: 5 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWVTRTA*SPAPPH
Trigger: GTGCGGCGGAGCCGGTGACAAAGCTGTCCTGGTCAC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441275.5
ENST00000631323.2
CDS-3UTR CAA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGAGCTCTACCCCTCACTaGGTGACAGACTTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWSSTPH*VTDLGK
Trigger: CTTTCCCAAGTCTGTCACCAAGTGAGGGGTAGAGCT...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp TATCCCCTTAGCCAGAGAGCACCTCCACACAAGTCTATCCTGAGTCCTAAAAGACAGCATCTCCTGAGGTaGGTCCCCATTCACTCTCCC +
Preference number: 5 (lower is better)
Translates to: YPLSQRAPPHKSILSPKRQHLLR*VPIHSP
Trigger: GGGAGAGTGAATGGGGACCAACCTCAGGAGATGCTG...TCTTTTAGGACTCAGGATAGACTTGTGTGGAGGTGCTCTCTGGCTAAGGGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp TTCCCCTGCCCAGCCCTGAGGGCTGTGGGAAGTAGGTGCTGGTGGAGGTTGTCTTGTGCAACTGGCTTATaGATAAACCCACTTCTTTAT +
Preference number: 5 (lower is better)
Translates to: FPCPALRAVGSRCWWRLSCATGL*INPLLY
Trigger: ATAAAGAAGTGGGTTTATCAATAAGCCAGTTGCACA...AGACAACCTCCACCAGCACCTACTTCCCACAGCCCTCAGGGCTGGGCAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp GGTGCTGGTGGAGGTTGTCTTTCTCACTGTTTTCTAGCTCCTCTCCCCTCCTATTTTAGTTCCGCTGTGTaGGTGCGTGTGCAACTGGCT +
Preference number: 5 (lower is better)
Translates to: GAGGGCLSHCFLAPLPSYFSSAV*VRVQLA
Trigger: AGCCAGTTGCACACGCACCAACACAGCGGAACTAAA...ATAGGAGGGGAGAGGAGCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS TCA 90 bp ATCCTCTCCAGGCAAGTGACCAGCCGGATCCTCTTAATTCTCAGTTaGCAGGGCGTATTGACACCCCTGGAAACCTTTTCCAGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: ILSRQVTSRILLILS*QGVLTPLETFSRLS
Trigger: AGAAAGCCTGGAAAAGGTTTCCAGGGGTGTCAATACGCCCTGTCAACTGAGAATTAAGAGGATCCGGCTGGTCACTTGCCTGGAGAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358186.6
ENST00000431056.5
CDS GCA 90 bp TGTGCCCTGGGAAAATGTCTTCCCAGGACACCTCTGAGTTTCCTCTaGTGGGAGACAAAGGTATTGAGAGACATCTCTGAGAATCAGGCC +
Preference number: 5 (lower is better)
Translates to: CALGKCLPRTPLSFL*WETKVLRDISENQA
Trigger: GGCCTGATTCTCAGAGATGTCTCTCAATACCTTTGTCTCCCAGCAGAGGAAACTCAGAGGTGTCCTGGGAAGACATTTTCCCAGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492681.1
ENST00000626925.1
CDS CCA 90 bp GCCCTGGGAAAATGTCTTCCCAGGACACCTCTGAGTTTCCTCTGCTaGGAGACAAAGGTATTGAGAGACATCTCTGAGAATCAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: ALGKCLPRTPLSFLC*ETKVLRDISENQAS
Trigger: TGAGGCCTGATTCTCAGAGATGTCTCTCAATACCTTTGTCTCCCAGCAGAGGAAACTCAGAGGTGTCCTGGGAAGACATTTTCCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492681.1
ENST00000626925.1
CDS-3UTR CAA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCACACAAGGAAGCCTTTaGAATGCAGATGCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTTQGSL*NADAWP
Trigger: TGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTGT...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTAGGCTGTCCAGCTCCTaGACCCCATCATGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSRLSSS*TPSWPL
Trigger: CAAAGGCCATGATGGGGTCAAGGAGCTGGACAGCCT...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAAGCATGCTGCTGATATaGACGACGCGGCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGSMLLI*TTRPLA
Trigger: GGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCT...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAAGCATGCTGCTGATATaGACGACGCGGCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLSMLLI*TTRPLA
Trigger: GGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCT...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAGTGGATAATCAAGAGTaGACTATATGGGTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAVDNQE*TIWVPP
Trigger: GGGAGGAACCCATATAGTCAACTCTTGATTATCCAC...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATGCGGAGATGGTGCCATaGCACTCCAGCCTAGGGGAC +
Preference number: 5 (lower is better)
Translates to: VSQKILGQMDPKQSWNANAEMVP*HSSLGD
Trigger: GTCCCCTAGGCTGGAGTGCAATGGCACCATCTCCGC...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATAGGCAGGAGAACCGCTaGAACCAGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: VSQKILGQMDPKQSWNANRQENR*NQGGGG
Trigger: ACCTCCGCCTCCCTGGTTCAAGCGGTTCTCCTGCCT...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GTGTGCTGCCCAGATGAGGACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGGGTGGTTCAGGACATTaGCAGCGTCACAAAAGATCC +
Preference number: 5 (lower is better)
Translates to: VCCPDEDTELVRRFSGKWGGSGH*QRHKRS
Trigger: GGATCTTTTGTGACGCTGCAAATGTCCTGAACCACC...CCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTCCTCATCTGGGCAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392379.6
ENST00000617317.2
CDS-3UTR CAA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGACATCAGGGGATGGGTTaGTGCTGGCTGGAGTCACCA +
Preference number: 5 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGHQGMG*CWLESP
Trigger: TGGTGACTCCAGCCAGCACAAACCCATCCCCTGATG...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAAGCCCCTCAGCCCTCTaGCTCTGTCTCTTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGSPSAL*LCLFEQ
Trigger: CTGCTCAAAGAGACAGAGCAAGAGGGCTGAGGGGCT...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAAGAGCGCTTGGCGGCTaGAGGGGAACTCTAAAGACC +
Preference number: 5 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLRALGG*RGTLKT
Trigger: GGTCTTTAGAGTTCCCCTCAAGCCGCCAAGCGCTCT...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp CTCTGCCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCATTTGAATGCAGATGCTaGGCCAATGAGAACCCAAAT +
Preference number: 5 (lower is better)
Translates to: LCLPLHTLFVKAQVTHYAFECRC*ANENPN
Trigger: ATTTGGGTTCTCATTGGCCAAGCATCTGCATTCAAA...TGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp AATGAAGGCCACGCTGAAGCCCTGCAGAACAGGGGTGTGTGTGTGTGTGTGTGTTTTGAATGCAGATGCTaGGCCAATGAGAACCCAAAT +
Preference number: 5 (lower is better)
Translates to: NEGHAEALQNRGVCVCVCFECRC*ANENPN
Trigger: ATTTGGGTTCTCATTGGCCAAGCATCTGCATTCAAA...ACACACACACACACACACACCCCTGTTCTGCAGGGCTTCAGCGTGGCCTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTAGGCTGTCCAGCTCCTaGACCCCATCATGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVRLSSS*TPSWPL
Trigger: CAAAGGCCATGATGGGGTCAAGGAGCTGGACAGCCT...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTAGCATGCTGCTGATATaGACGACGCGGCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVSMLLI*TTRPLA
Trigger: GGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCT...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTGCCTCTACCCCGAACTaGGTGATGCAGTACGGGGAG +
Preference number: 5 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGASTPN*VMQYGE
Trigger: CTCCCCGTACTGCATCACCAAGTTCGGGGTAGAGGC...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp AGATTCACCATGTTTGCCCTGAGATTTAGAGGCCTCTGCCTGCCACTCCACACCGTGGATAATCAAGAGTaGACTATATGGGTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: RFTMFALRFRGLCLPLHTVDNQE*TIWVPP
Trigger: GGGAGGAACCCATATAGTCAACTCTTGATTATCCAC...GGTGTGGAGTGGCAGGCAGAGGCCTCTAAATCTCAGGGCAAACATGGTGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCTTGCAAGAAGCCCTaGCCCAGCCTCCAACCATCA +
Preference number: 5 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSSCKKP*PSLQPS
Trigger: TGATGGTTGGAGGCTGGGCAAGGGCTTCTTGCAAGA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp GCCTGCTTGGTCTTTGAATTCCTAGAGCCTGCTCTCGGGAATGGCCTTGACAGAGATCAGATGAGAGATTaGCCACGAACTCACTTGAGT +
Preference number: 5 (lower is better)
Translates to: ACLVFEFLEPALGNGLDRDQMRD*PRTHLS
Trigger: ACTCAAGTGAGTTCGTGGCAAATCTCTCATCTGATC...TCTGTCAAGGCCATTCCCGAGAGCAGGCTCTAGGAATTCAAAGACCAAGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp GGTGCTGGTGGAGGTTGTCTTTCTCACTGTTTTCTAGCTCCTCTCCCCTCCTATAGGTGCTGGTGGAGGTaGTCTTTCTCACTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: GAGGGCLSHCFLAPLPSYRCWWR*SFSLFS
Trigger: AGAAAACAGTGAGAAAGACAACCTCCACCAGCACCT...ATAGGAGGGGAGAGGAGCTAGAAAACAGTGAGAAAGACAACCTCCACCAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS TCA 90 bp TCAAGTGATCAGGATAGTGTGGTCGGTACACCCAAAGCTTGTGAATaGCTCCATCCAAAGAGCATCAGTCTGTATTCCCATGACCCCCAG +
Preference number: 5 (lower is better)
Translates to: SSDQDSVVGTPKACE*LHPKSISLYSHDPQ
Trigger: CTGGGGGTCATGGGAATACAGACTGATGCTCTTTGGATGGAGTCATTCACAAGCTTTGGGTGTACCGACCACACTATCCTGATCACTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000468710.1
ENST00000629914.1
ENST00000651856.1
CDS-3UTR CAA 90 bp TCTTCTCAGACCCCTATACAAGACCTCTCTGGTGCCCCTACACAGCATCACGACTTTGAATGCAGATGCTaGGCCAATGAGAACCCAAAT +
Preference number: 5 (lower is better)
Translates to: SSQTPIQDLSGAPTQHHDFECRC*ANENPN
Trigger: ATTTGGGTTCTCATTGGCCAAGCATCTGCATTCAAA...GTCGTGATGCTGTGTAGGGGCACCAGAGAGGTCTTGTATAGGGGTCTGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTACCCCATCATGGCCTTaGTCCTTCATCAAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSTPSWP*SFIKQP
Trigger: TGGCTGCTTGATGAAGGACAAAGGCCATGATGGGGT...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
CDS-3UTR CAA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAACCCCATCATGGCCTTaGTCCTTCATCAAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLTPSWP*SFIKQP
Trigger: TGGCTGCTTGATGAAGGACAAAGGCCATGATGGGGT...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
CDS-3UTR CAA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGAGGCTGTCCAGCTCCTaGACCCCATCATGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWRLSSS*TPSWPL
Trigger: CAAAGGCCATGATGGGGTCAAGGAGCTGGACAGCCT...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTCGCTGCTGCAGACATaGAGCTGGACGGTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSSLLQT*SWTVLN
Trigger: ATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTAGCATGCTGCTGATATaGACGACGCGGCCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGSMLLI*TTRPLA
Trigger: GGCCAAAGGCCGCGTCGTCAATATCAGCAGCATGCT...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp ACCAATTTGCCCCCAGTTATTCAGAGAAATCTTTCCAACCACCCTCAGCCTGCTCCTTCCTCTTGGGACTaGGTTAACCCTGTTGCTATC +
Preference number: 5 (lower is better)
Translates to: TNLPPVIQRNLSNHPQPAPSSWD*VNPVAI
Trigger: GATAGCAACAGGGTTAACCAAGTCCCAAGAGGAAGG...AGCAGGCTGAGGGTGGTTGGAAAGATTTCTCTGAATAACTGGGGGCAAATTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS GCA 90 bp AGCTTGCTGGTACAACTGAGTAAGAGGCCCTCTTTCCACCAGGGTTaGTGGCTGATAGAAAGTGAGCCAGTATTTGCTATGGCTATGTTT +
Preference number: 5 (lower is better)
Translates to: SLLVQLSKRPSFHQG*WLIESEPVFAMAMF
Trigger: AAACATAGCCATAGCAAATACTGGCTCACTTTCTATCAGCCAGCAACCCTGGTGGAAAGAGGGCCTCTTACTCAGTTGTACCAGCAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS GCA 90 bp GAAAAATGTCTCACCCACCGAGCAGAGAAAGCAAGTTGTCCTGAATaGCCACTCTTCCCTTCATCCTTCTTCTATAGCAGTAGAACGCCT +
Preference number: 5 (lower is better)
Translates to: EKCLTHRAEKASCPE*PLFPSSFFYSSRTP
Trigger: AGGCGTTCTACTGCTATAGAAGAAGGATGAAGGGAAGAGTGGGCATTCAGGACAACTTGCTTTCTCTGCTCGGTGGGTGAGACATTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS-3UTR CAA 90 bp CCTGCCACTCCACACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAATTTGAATGCAGATGCTaGGCCAATGAGAACCCAAAT +
Preference number: 5 (lower is better)
Translates to: PATPHPVCEGPSHSLCKEFECRC*ANENPN
Trigger: ATTTGGGTTCTCATTGGCCAAGCATCTGCATTCAAA...TTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGTGTGGAGTGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAGCCTCTACCCCGAACTaGGTGATGCAGTACGGGGAG +
Preference number: 5 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQASTPN*VMQYGE
Trigger: CTCCCCGTACTGCATCACCAAGTTCGGGGTAGAGGC...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGGAGGACAGTGGTGTTaGGCTTCGGTCCCAACATAC +
Preference number: 5 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWGGQWC*ASVPTY
Trigger: GTATGTTGGGACCGAAGCCAAACACCACTGTCCTCC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTGTGCTGCTTGCTTCTTaGTTCCCGGTTTCCGAAGCG +
Preference number: 5 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGVLLAS*FPVSEA
Trigger: CGCTTCGGAAACCGGGAACAAAGAAGCAAGCAGCAC...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp ACCCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGGTGGTTCAGGACATTaGCAGCGTCACAAAAGATCC +
Preference number: 5 (lower is better)
Translates to: TLFVKAQVTHYAKKSFPLGGSGH*QRHKRS
Trigger: GGATCTTTTGTGACGCTGCAAATGTCCTGAACCACC...TAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392379.6
ENST00000617317.2
CDS-3UTR CAA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTCCCCCAGTGTTGCTCTaGCTCCATTTTCTCTATCAC +
Preference number: 5 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSPPVLL*LHFLYH
Trigger: GTGATAGAGAAAATGGAGCAAGAGCAACACTGGGGG...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTTTGCTTCCAGGGCTGTaGCGAGCCACAGTGTTATGT +
Preference number: 5 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVLLPGL*RATVLC
Trigger: ACATAACACTGTGGCTCGCAACAGCCCTGGAAGCAA...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTGCAATAGTGGGCGTCTaGCTCCATTTTCTCTATCAC +
Preference number: 5 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSAIVGV*LHFLYH
Trigger: GTGATAGAGAAAATGGAGCAAGACGCCCACTATTGC...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTGGGCGTCAGGACATTaGCAGCGTCACAAAAGATCC +
Preference number: 5 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGWASGH*QRHKRS
Trigger: GGATCTTTTGTGACGCTGCAAATGTCCTGACGCCCA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441275.5
ENST00000631323.2
CDS-3UTR CAA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAACTGTCAGGCGCATCTaGCAAGAAGCCCTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQTVRRI*QEALAQ
Trigger: CTGGGCAAGGGCTTCTTGCAAGATGCGCCTGACAGT...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAGCCCCGGAAGTCCCATaGTACCTCCATTGGAACGAG +
Preference number: 5 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQAPEVP*YLHWNE
Trigger: CTCGTTCCAATGGAGGTACAATGGGACTTCCGGGGC...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS CCA 90 bp CAACTTGCACTTTCACATCTACGAAATGTTCCTAAGAATCGCCAGTaGAAGGAGGCAAAGATATATGTGCAAGATGGCTCACCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: QLALSHLRNVPKNRQ*KEAKIYVQDGSPRL
Trigger: AAGCCTGGGTGAGCCATCTTGCACATATATCTTTGCCTCCTTCCACTGGCGATTCTTAGGAACATTTCGTAGATGTGAAAGTGCAAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS-3UTR CAA 90 bp CTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTGCAATAGTGGGCGTCTaGCTCCATTTTCTCTATCAC +
Preference number: 5 (lower is better)
Translates to: LFVKAQVTHYAKKSFPLVAIVGV*LHFLYH
Trigger: GTGATAGAGAAAATGGAGCAAGACGCCCACTATTGC...AACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATTCGCTGCTGCAGACATaGAGCTGGACGGTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHSLLQT*SWTVLN
Trigger: ATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGA...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTGTGGATAATCAAGAGTaGACTATATGGGTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSVDNQE*TIWVPP
Trigger: GGGAGGAACCCATATAGTCAACTCTTGATTATCCAC...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAGTGCTGCTTGCTTCTTaGTTCCCGGTTTCCGAAGCG +
Preference number: 5 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQVLLAS*FPVSEA
Trigger: CGCTTCGGAAACCGGGAACAAAGAAGCAAGCAGCAC...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGTCTGAAGGGTGCTGCTaGCTTCTTTGTTCCCGGTTT +
Preference number: 5 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWSEGCC*LLCSRF
Trigger: AAACCGGGAACAAAGAAGCAAGCAGCACCCTTCAGA...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTTCATATACTGTGGGGTaGTTTCATCTCCCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGSYTVG*FHLPQS
Trigger: GCTCTGGGGGAGATGAAACAACCCCACAGTATATGA...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS-3UTR CAA 90 bp AAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATGGTGGACAGAGAGCCTCTTaGTTTTGGCATGAAGAGTCC +
Preference number: 5 (lower is better)
Translates to: KSFPLVSVKTSYGSSWHGGQRAS*FWHEES
Trigger: GGACTCTTCATGCCAAAACAAAGAGGCTCTCTGTCC...ACCATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp TCCCACAGAGGACTCCACCAAGAAAGAACTAATGCATCTTCAGGTCTAGGGTGTACAGAAACTACCAATTaGCCCCCAGTTATTCAGAGA +
Preference number: 5 (lower is better)
Translates to: SHRGLHQERTNASSGLGCTETTN*PPVIQR
Trigger: TCTCTGAATAACTGGGGGCAAATTGGTAGTTTCTGT...ACACCCTAGACCTGAAGATGCATTAGTTCTTTCTTGGTGGAGTCCTCTGTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651856.1
CDS-3UTR CAA 90 bp GACACAGAGTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGATTTGAATGCAGATGCTaGGCCAATGAGAACCCAAAT +
Preference number: 5 (lower is better)
Translates to: DTELVRRFSGKWIQNSPGFECRC*ANENPN
Trigger: ATTTGGGTTCTCATTGGCCAAGCATCTGCATTCAAA...TCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAACTCTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp CCTGTTTGTGAAGGCCCAAGTCACTCACTATGCAAAGAAGTCATTCCCTCTAGTTTTGAATGCAGATGCTaGGCCAATGAGAACCCAAAT +
Preference number: 5 (lower is better)
Translates to: PVCEGPSHSLCKEVIPSSFECRC*ANENPN
Trigger: ATTTGGGTTCTCATTGGCCAAGCATCTGCATTCAAA...ACTAGAGGGAATGACTTCTTTGCATAGTGAGTGACTTGGGCCTTCACAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAATCGCTGCTGCAGACATaGAGCTGGACGGTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQSLLQT*SWTVLN
Trigger: ATTGAGAACCGTCCAGCTCAATGTCTGCAGCAGCGA...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS CCA 90 bp TTTACAGGAGATTTTGATGAAGTAAATTATGATCCGCCCACTCAGTaGGTGCTTCAAAGCTTCATCAAGCAGCCAGCAAACACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: FTGDFDEVNYDPPTQ*VLQSFIKQPANTRK
Trigger: CTTCCTTGTGTTTGCTGGCTGCTTGATGAAGCTTTGAAGCACCCACTGAGTGGGCGGATCATAATTTACTTCATCAAAATCTCCTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000495285.1
ENST00000626468.2
ENST00000627756.2
CDS-3UTR CAA 90 bp AAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGCATACACAAGGAAGCCTTTaGAATGCAGATGCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: KKSFPLVSVKTSYGSSWHTQGSL*NADAWP
Trigger: TGGCCAAGCATCTGCATTCAAAAGGCTTCCTTGTGT...ATGCCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp GTTAGTCAGAAGATTCTCGGGCAAATGGATCCAAAACAGTCCTGGAATGCAAATGTGGATAATCAAGAGTaGACTATATGGGTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: VSQKILGQMDPKQSWNANVDNQE*TIWVPP
Trigger: GGGAGGAACCCATATAGTCAACTCTTGATTATCCAC...ATTTGCATTCCAGGACTGTTTTGGATCCATTTGCCCGAGAATCTTCTGACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000612690.3
ENST00000617317.2
CDS-3UTR CAA 90 bp GCAAAGAAGTCATTCCCTCTAGTTAGTGTTAAAACCAGTTATGGGTCTTCCTGGGTGGATAATCAAGAGTaGACTATATGGGTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: AKKSFPLVSVKTSYGSSWVDNQE*TIWVPP
Trigger: GGGAGGAACCCATATAGTCAACTCTTGATTATCCAC...CCAGGAAGACCCATAACTGGTTTTAACACTAACTAGAGGGAATGACTTCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000358186.6
ENST00000392378.6
ENST00000392379.6
ENST00000441275.5
ENST00000612690.3
ENST00000617317.2
ENST00000631323.2
ENST00000651856.1
CDS-3UTR CAA 90 bp TCCTTTAATAAACTTCAGCACGGACACAAATTCGCCCAACATGTAAAAGTGCAAAGTCACTTTCCTTCTTaGGGCCTCAGTTATGTCATC +
Preference number: 5 (lower is better)
Translates to: SFNKLQHGHKFAQHVKVQSHFPS*GLSYVI
Trigger: GATGACATAACTGAGGCCCAAAGAAGGAAAGTGACT...TTGCACTTTTACATGTTGGGCGAATTTGTGTCCGTGCTGAAGTTTATTAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612690.3
CDS TCA 90 bp AGCATCCCTAATCCAATAATCCCAAATCTGAAATGTTCCAAAATCTaGATTTTGAGTGCTGACATGATGCTCCAGGGAAATACTCATTGG +
Preference number: 5 (lower is better)
Translates to: SIPNPIIPNLKCSKI*ILSADMMLQGNTHW
Trigger: CCAATGAGTATTTCCCTGGAGCATCATGTCAGCACTCAAAATTCAGATTTTGGAACATTTCAGATTTGGGATTATTGGATTAGGGATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS TCA 90 bp AATAATCCCAAATCTGAAATGTTCCAAAATCTGAATTTTGAGTGCTaGCATGATGCTCCAGGGAAATACTCATTGGAGCACTTTGGATTT +
Preference number: 5 (lower is better)
Translates to: NNPKSEMFQNLNFEC*HDAPGKYSLEHFGF
Trigger: AAATCCAAAGTGCTCCAATGAGTATTTCCCTGGAGCATCATGTCAGCACTCAAAATTCAGATTTTGGAACATTTCAGATTTGGGATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS CCA 72 bp CCGCCACCCGGACGCTTCTACACGCGAAGCGCGCGCTaGGGCTACGCTGGGCGGGGCTCACGGCGGCGTGGC +
Preference number: 6 (lower is better)
Translates to: PPPGRFYTRSAR*GYAGRGSRRRG
Trigger: GCCACGCCGCCGTGAGCCCCGCCCAGCGTAGCCCCAGCGCGCGCTTCGCGTGTAGAAGCGTCCGGGTGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392378.6
ENST00000612690.3
CDS GCA 72 bp GTCTGGGCGCGATCGGCCATCCTACCCTTACCCCGCTaGGGCCGCAGGGCTCGGCCTGTAGGGCGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: VWARSAILPLPR*GRRARPVGREP
Trigger: GGGCTCGCGCCCTACAGGCCGAGCCCTGCGGCCGCAGCGGGGTAAGGGTAGGATGGCCGATCGCGCCCAGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS GCA 72 bp CCTCCTGCCCAAAACCAAATGGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCTCTCGCCTTCACCCGG +
Preference number: 6 (lower is better)
Translates to: PPAQNQMGRGLR*RGLAEALAFTR
Trigger: CCGGGTGAAGGCGAGAGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCCCATTTGGTTTTGGGCAGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445160.2
ENST00000626799.2
CDS GCA 72 bp GTGGGCGTCCAAAACCAAATGGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCTCTCGCCTTCACCCGG +
Preference number: 6 (lower is better)
Translates to: VGVQNQMGRGLR*RGLAEALAFTR
Trigger: CCGGGTGAAGGCGAGAGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCCCATTTGGTTTTGGACGCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000446746.5
ENST00000625957.2
CDS GCA 72 bp CGGTGGTTCCAAAACCAAATGGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCTCTCGCCTTCACCCGG +
Preference number: 6 (lower is better)
Translates to: RWFQNQMGRGLR*RGLAEALAFTR
Trigger: CCGGGTGAAGGCGAGAGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCCCATTTGGTTTTGGAACCACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000392378.6
ENST00000468710.1
ENST00000492681.1
ENST00000612690.3
ENST00000626925.1
ENST00000629914.1
ENST00000651856.1
CDS GCA 72 bp CTGACTGGCCAAAACCAAATGGGCAGGGGGCTCCGCTaGAGAGGGCTCGCCGAGGCTCTCGCCTTCACCCGG +
Preference number: 6 (lower is better)
Translates to: LTGQNQMGRGLR*RGLAEALAFTR
Trigger: CCGGGTGAAGGCGAGAGCCTCGGCGAGCCCTCTGCAGCGGAGCCCCCTGCCCATTTGGTTTTGGCCAGTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000392379.6
ENST00000432819.5
ENST00000441275.5
ENST00000617317.2
ENST00000626468.2
ENST00000630698.2
ENST00000631323.2
CDS CCA 72 bp GGAGACGCCGGCAGAAAAGCCGAGAGGGAGACTCCCTaGGGTCTGGGCGCGATCGGCCATCCTACCCTTACC +
Preference number: 6 (lower is better)
Translates to: GDAGRKAERETP*GLGAIGHPTLT
Trigger: GGTAAGGGTAGGATGGCCGATCGCGCCCAGACCCCAGGGAGTCTCCCTCTCGGCTTTTCTGCCGGCGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS CCA 72 bp GCTGGCCTCAAGTCCCAGCCAAAGCCTCAGGCATACTaGCAACTGCCCATGGGCCTGGCCCACCAGCATGCG +
Preference number: 6 (lower is better)
Translates to: AGLKSQPKPQAY*QLPMGLAHQHA
Trigger: CGCATGCTGGTGGGCCAGGCCCATGGGCAGTTGCCAGTATGCCTGAGGCTTTGGCTGGGACTTGAGGCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS CAA 90 bp CTGGCTGGCTTCGGTCTGGGCTCGGCCTTTGACTACGACGTGACCTaGAGGACGGTTCCTTCCCTTCGTGGGGCCTGGGTCCCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: LAGFGLGSAFDYDVT*RTVPSLRGAWVPFS
Trigger: ACTGAAGGGGACCCAGGCCCCACGAAGGGAAGGAACCGTCCTCAAGGTCACGTCGTAGTCAAAGGCCGAGCCCAGACCGAAGCCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS CAA 90 bp GGTTCTGGCTTCGGTCTGGGCTCGGCCTTTGACTACGACGTGACCTaGAGGACGGTTCCTTCCCTTCGTGGGGCCTGGGTCCCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: GSGFGLGSAFDYDVT*RTVPSLRGAWVPFS
Trigger: ACTGAAGGGGACCCAGGCCCCACGAAGGGAAGGAACCGTCCTCAAGGTCACGTCGTAGTCAAAGGCCGAGCCCAGACCGAAGCCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445160.2
ENST00000626799.2
CDS TCA 72 bp GGGTCCCCTTCAGTAAGATGCGCCGGCAGGAAACGATaGGTCGTTTCACCTGGGAGCTGCAGGGCCGCGTGT +
Preference number: 6 (lower is better)
Translates to: GSPSVRCAGRKR*VVSPGSCRAAC
Trigger: ACACGCGGCCCTGCAGCTCCCAGGTGAAACGACTCATCGTTTCCTGCCGGCGCATCTTACTGAAGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000445160.2
ENST00000476764.2
ENST00000626799.2
ENST00000627844.1
CDS CAA 72 bp GCCGGGTTGGCCATGCGGCCCAGCATGCTGCTGATATaGACGACGCGGCCTCTGCTGAGTTGTGGACATTGG +
Preference number: 6 (lower is better)
Translates to: AGLAMRPSMLLI*TTRPLLSCGHW
Trigger: CCAATGTCCACAACTCAGCAGAGGCCGCGTCGTCAATATCAGCAGCATGCTGGGCCGCATGGCCAACCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455876.1
CDS TCA 72 bp TCCCGGTGGTTCTGGCTTCGGTCTGGGCTCGGCCTTTaGCTACGACGTGACCTTGAGGACGGTTCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: SRWFWLRSGLGL*LRRDLEDGSFP
Trigger: AGGGAAGGAACCGTCCTCAAGGTCACGTCGTAGTCAAAGGCCGAGCCCAGACCGAAGCCAGAACCACCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445160.2
ENST00000626799.2
CDS TCA 72 bp CAGCCCCGGCTCCTGGAGACAGCTTGCTGGTACAACTaGGTAAGAGGCCCTCTTTCCACCAGGGTTGCTGGC +
Preference number: 6 (lower is better)
Translates to: QPRLLETACWYN*VRGPLSTRVAG
Trigger: GCCAGCAACCCTGGTGGAAAGAGGGCCTCTTACTCAGTTGTACCAGCAAGCTGTCTCCAGGAGCCGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS GCA 72 bp GCGTCATCCACGACCCCACAGCTCCCACTGTCTCCCTaGAGACGCGCCCTGAGTCTTCACCTTCTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: ASSTTPQLPLSP*RRALSLHLLLF
Trigger: GAAGAGAAGAAGGTGAAGACTCAGGGCGCGTCTGCAGGGAGACAGTGGGAGCTGTGGGGTCGTGGATGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483920.1
ENST00000626126.1
CDS CCA 72 bp AAGATGCGCCGGCAGGAAACGATGAGTCGTTTCACCTaGGAGCTGCAGGGCCGCGTGTTTAACCCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: KMRRQETMSRFT*ELQGRVFNPGP
Trigger: AGGCCCTGGGTTAAACACGCGGCCCTGCAGCTCCCAGGTGAAACGACTCATCGTTTCCTGCCGGCGCATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000445160.2
ENST00000476764.2
ENST00000626799.2
ENST00000627844.1
CDS CCA 72 bp GAGGCAGACCCTGAGGACTCCTGTCAAGGCAGGAGCTaGCCTCAAGTCCCAGCCAAAGCCTCAGGCATACTG +
Preference number: 6 (lower is better)
Translates to: EADPEDSCQGRS*PQVPAKASGIL
Trigger: CAGTATGCCTGAGGCTTTGGCTGGGACTTGAGGCCAGCTCCTGCCTTGACAGGAGTCCTCAGGGTCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS TCA 72 bp AGGAGGAGCAGCAGGCCACTCCCCACCCGTCATGGCTaGCACTTCCACGTCATCTTCGAGACCATAGCCACT +
Preference number: 6 (lower is better)
Translates to: RRSSRPLPTRHG*HFHVIFETIAT
Trigger: AGTGGCTATGGTCTCGAAGATGACGTGGAAGTGTCAGCCATGACGGGTGGGGAGTGGCCTGCTGCTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483920.1
ENST00000626126.1
CDS GCA 72 bp TCAAGTCCCAGCCAAAGCCTCAGGCATACTGGCAACTaGCCATGGGCCTGGCCCACCAGCATGCGGTTCTTT +
Preference number: 6 (lower is better)
Translates to: SSPSQSLRHTGN*PWAWPTSMRFF
Trigger: AAAGAACCGCATGCTGGTGGGCCAGGCCCATGGGCAGTTGCCAGTATGCCTGAGGCTTTGGCTGGGACTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS CAA 90 bp GGGATGCCACACCCATTCCCCAGAACCCTCCCCAGACGGGTTCTCTaGAGCACTGTCAGGAGAGCGACAGCCTTTCAGGAAAGCAGTTTG +
Preference number: 6 (lower is better)
Translates to: GMPHPFPRTLPRRVL*STVRRATAFQESSL
Trigger: CAAACTGCTTTCCTGAAAGGCTGTCGCTCTCCTGACAGTGCTCAAGAGAACCCGTCTGGGGAGGGTTCTGGGGAATGGGTGTGGCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS TCA 72 bp ACTCTGCATCAGCTGACTACAGGCAGATTTCCAGGCTaGCTGGCTGGCTTCGGTCTGGGCTCGGCCTTTGAC +
Preference number: 6 (lower is better)
Translates to: TLHQLTTGRFPG*LAGFGLGSAFD
Trigger: GTCAAAGGCCGAGCCCAGACCGAAGCCAGCCAGTCAGCCTGGAAATCTGCCTGTAGTCAGCTGATGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS CCA 72 bp CCCAGCCAAAGCCTCAGGCATACTGGCAACTGCCCATaGGCCTGGCCCACCAGCATGCGGTTCTTTTTAATC +
Preference number: 6 (lower is better)
Translates to: PSQSLRHTGNCP*AWPTSMRFFLI
Trigger: GATTAAAAAGAACCGCATGCTGGTGGGCCAGGCCCATGGGCAGTTGCCAGTATGCCTGAGGCTTTGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS CAA 90 bp AGCTGGACGGTTCTCAATCGGTCACTGTTTAGGCTGTCCAGCTCCTaGACCCCATCATGGCCTTTGTCCTGGGGAGGAGAGAAGAGCTGC +
Preference number: 6 (lower is better)
Translates to: SWTVLNRSLFRLSSS*TPSWPLSWGGEKSC
Trigger: GCAGCTCTTCTCTCCTCCCCAGGACAAAGGCCATGATGGGGTCAAGGAGCTGGACAGCCTAAACAGTGACCGATTGAGAACCGTCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS TCA 72 bp TGTGCTGAAATGACCCAGGAGAGAGCGTGGAGCCAGTaGCGTAGGAGGTGGCAGACATCTGCTGGAGCTAAG +
Preference number: 6 (lower is better)
Translates to: CAEMTQERAWSQ*RRRWQTSAGAK
Trigger: CTTAGCTCCAGCAGATGTCTGCCACCTCCTACGTCACTGGCTCCACGCTCTCTCCTGGGTCATTTCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS GCA 72 bp CACCGCCTACACTGTCCATGTGTGAAAACCTCTGCCTaGTCAGAAAGTGTCCCCTCAAGGCCACCACCACCT +
Preference number: 6 (lower is better)
Translates to: HRLHCPCVKTSA*SESVPSRPPPP
Trigger: AGGTGGTGGTGGCCTTGAGGGGACACTTTCTGAGCAGGCAGAGGTTTTCACACATGGACAGTGTAGGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492681.1
ENST00000626925.1
CDS CCA 72 bp CAAAGCCTCAGGCATACTGGCAACTGCCCATGGGCCTaGCCCACCAGCATGCGGTTCTTTTTAATCCTGAGC +
Preference number: 6 (lower is better)
Translates to: QSLRHTGNCPWA*PTSMRFFLILS
Trigger: GCTCAGGATTAAAAAGAACCGCATGCTGGTGGGCCAGGCCCATGGGCAGTTGCCAGTATGCCTGAGGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS CAA 90 bp CTTCCGGGGTTAGTGGTCAGTCTAGGACTAGAACCGAAGGCCCTTTaGAAGAGTCTTCTGCAGCATCGAGCAGCCTCTGCCCTGTGCTGT +
Preference number: 6 (lower is better)
Translates to: LPGLVVSLGLEPKAL*KSLLQHRAASALCC
Trigger: ACAGCACAGGGCAGAGGCTGCTCGATGCTGCAGAAGACTCTTCAAAAGGGCCTTCGGTTCTAGTCCTAGACTGACCACTAACCCCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS GCA 72 bp TTGCAGCGTCACAAAAGATCCTGTCAGCGCGAGGCCTaGAGGCGGCCCTCCATAGTGAAATATGTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: LQRHKRSCQREA*RRPSIVKYVLL
Trigger: CAGAAGCACATATTTCACTATGGAGGGCCGCCTGCAGGCCTCGCGCTGACAGGATCTTTTGTGACGCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000392379.6
ENST00000432819.5
ENST00000441275.5
ENST00000476764.2
ENST00000617317.2
ENST00000626468.2
ENST00000627844.1
ENST00000630698.2
ENST00000631323.2
CDS GCA 72 bp TCATCACCGCCTACACTGTCCATGTGTGAAAACCTCTaGCTGCTCAGAAAGTGTCCCCTCAAGGCCACCACC +
Preference number: 6 (lower is better)
Translates to: SSPPTLSMCENL*LLRKCPLKATT
Trigger: GGTGGTGGCCTTGAGGGGACACTTTCTGAGCAGGCAGAGGTTTTCACACATGGACAGTGTAGGCGGTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492681.1
ENST00000626925.1
CDS TCA 72 bp TTCTCAATCGGTCACTGTTTAGGCTGTCCAGCTCCTTaGCCCCATCATGGCCTTTGTCCTGGGGAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: FSIGHCLGCPAP*PHHGLCPGEER
Trigger: TCTCTCCTCCCCAGGACAAAGGCCATGATGGGGTCAAGGAGCTGGACAGCCTAAACAGTGACCGATTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS GCA 72 bp TCCATATCCCGAAGATCCTTCTGTAACTGTGCTACCTaGTCTCCCTCCCTCCACGCCAGGCTTCCAAGAACT +
Preference number: 6 (lower is better)
Translates to: SISRRSFCNCAT*SPSLHARLPRT
Trigger: AGTTCTTGGAAGCCTGGCGTGGAGGGAGGGAGAGCAGGTAGCACAGTTACAGAAGGATCTTCGGGATATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483920.1
ENST00000626126.1
CDS CCA 72 bp CCCTGGGGAGTACAGGACATGTCAGGAATTACCACGTaGGGATGGAAACCCAGGGTTGCCAGATGCTTACAT +
Preference number: 6 (lower is better)
Translates to: PWGVQDMSGITT*GWKPRVARCLH
Trigger: ATGTAAGCATCTGGCAACCCTGGGTTTCCATCCCCACGTGGTAATTCCTGACATGTCCTGTACTCCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS TCA 72 bp AGCAATAGTGGGCGTCTGCAAGAGAAAAGGAAGCCGTaGGTACAAGGACAGACTAGACAGACCCTCAGCCAC +
Preference number: 6 (lower is better)
Translates to: SNSGRLQEKRKP*VQGQTRQTLSH
Trigger: GTGGCTGAGGGTCTGTCTAGTCTGTCCTTGTACTCACGGCTTCCTTTTCTCTTGCAGACGCCCACTATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000477015.5
ENST00000495285.1
ENST00000625648.2
ENST00000627756.2
CDS CAA 72 bp CAGAAAGTGTCCCCTCAAGGCCACCACCACCTCTGGTaGCTTACCTTGCTCCATTTTCTCTATCACAGGCAC +
Preference number: 6 (lower is better)
Translates to: QKVSPQGHHHLW*LTLLHFLYHRH
Trigger: GTGCCTGTGATAGAGAAAATGGAGCAAGGTAAGCAACCAGAGGTGGTGGTGGCCTTGAGGGGACACTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492681.1
ENST00000626925.1
CDS CAA 72 bp TTAGTGGTCAGTCTAGGACTAGAACCGAAGGCCCTTTaGAAGAGTCTTCTGCAGCATCGAGCAGCCTCTGCC +
Preference number: 6 (lower is better)
Translates to: LVVSLGLEPKAL*KSLLQHRAASA
Trigger: GGCAGAGGCTGCTCGATGCTGCAGAAGACTCTTCAAAAGGGCCTTCGGTTCTAGTCCTAGACTGACCACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS CAA 90 bp GATCCTCTCCAGGCAAGTGACCAGCCGGATCCTCTTAATTCTCAGTaGACAGGGCGTATTGACACCCCTGGAAACCTTTTCCAGGCTTTC +
Preference number: 6 (lower is better)
Translates to: DPLQASDQPDPLNSQ*TGRIDTPGNLFQAF
Trigger: GAAAGCCTGGAAAAGGTTTCCAGGGGTGTCAATACGCCCTGTCAACTGAGAATTAAGAGGATCCGGCTGGTCACTTGCCTGGAGAGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358186.6
ENST00000431056.5
CDS TCA 72 bp CCTCTGCTGGGAGACAAAGGTATTGAGAGACATCTCTaGGAATCAGGCCTCATCACCGCCTACACTGTCCAT +
Preference number: 6 (lower is better)
Translates to: PLLGDKGIERHL*ESGLITAYTVH
Trigger: ATGGACAGTGTAGGCGGTGATGAGGCCTGATTCTCAGAGATGTCTCTCAATACCTTTGTCTCCCAGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492681.1
ENST00000626925.1
CDS GCA 72 bp GGCACATTATTCCGAATAATAAATGCCAGATCATGCTaGTGGAGACGCCGGCAGAAAAGCCGAGAGGGAGAC +
Preference number: 6 (lower is better)
Translates to: GTLFRIINARSC*WRRRQKSREGD
Trigger: GTCTCCCTCTCGGCTTTTCTGCCGGCGTCTCCAGCAGCATGATCTGGCATTTATTATTCGGAATAATGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS GCA 72 bp CCTCCTCCTGCCTGGCACATTATTCCGAATAATAAATaGCAGATCATGCTGCTGGAGACGCCGGCAGAAAAG +
Preference number: 6 (lower is better)
Translates to: PPPAWHIIPNNK*QIMLLETPAEK
Trigger: CTTTTCTGCCGGCGTCTCCAGCAGCATGATCTGGCATTTATTATTCGGAATAATGTGCCAGGCAGGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS CCA 72 bp ATATTGACGACGCGGCCTCTGCTGAGTTGTGGACATTaGAGCTGCTGGGACAGGTATTTCCATTCTGAGCAA +
Preference number: 6 (lower is better)
Translates to: ILTTRPLLSCGH*SCWDRYFHSEQ
Trigger: TTGCTCAGAATGGAAATACCTGTCCCAGCAGCTCCAATGTCCACAACTCAGCAGAGGCCGCGTCGTCAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455876.1
CDS CAA 72 bp CAGGCAAGTGACCAGCCGGATCCTCTTAATTCTCAGTaGACAGGGCGTATTGACACCCCTGGAAACCTTTTC +
Preference number: 6 (lower is better)
Translates to: QASDQPDPLNSQ*TGRIDTPGNLF
Trigger: GAAAAGGTTTCCAGGGGTGTCAATACGCCCTGTCAACTGAGAATTAAGAGGATCCGGCTGGTCACTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358186.6
ENST00000431056.5
CDS TCA 72 bp GCCCTCTTTCCACCAGGGTTGCTGGCTGATAGAAAGTaGGCCAGTATTTGCTATGGCTATGTTTGCCACTGT +
Preference number: 6 (lower is better)
Translates to: ALFPPGLLADRK*ASICYGYVCHC
Trigger: ACAGTGGCAAACATAGCCATAGCAAATACTGGCTCACTTTCTATCAGCCAGCAACCCTGGTGGAAAGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS TCA 72 bp CATTTTTATGGCATCATGGTTCTTGCTGGGACCCGCTaGGGTAGGTCCACATTCTGCAGAAGAATCCAGCAC +
Preference number: 6 (lower is better)
Translates to: HFYGIMVLAGTR*GRSTFCRRIQH
Trigger: GTGCTGGATTCTTCTGCAGAATGTGGACCTACCTCAGCGGGTCCCAGCAAGAACCATGATGCCATAAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS GCA 72 bp CTCACCCACCGAGCAGAGAAAGCAAGTTGTCCTGAATaGCCACTCTTCCCTTCATCCTTCTTCTATAGCAGT +
Preference number: 6 (lower is better)
Translates to: LTHRAEKASCPE*PLFPSSFFYSS
Trigger: ACTGCTATAGAAGAAGGATGAAGGGAAGAGTGGGCATTCAGGACAACTTGCTTTCTCTGCTCGGTGGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS CCA 72 bp ACATTATTCCGAATAATAAATGCCAGATCATGCTGCTaGAGACGCCGGCAGAAAAGCCGAGAGGGAGACTCC +
Preference number: 6 (lower is better)
Translates to: TLFRIINARSCC*RRRQKSREGDS
Trigger: GGAGTCTCCCTCTCGGCTTTTCTGCCGGCGTCTCCAGCAGCATGATCTGGCATTTATTATTCGGAATAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS GCA 72 bp GGAAAATGTCTTCCCAGGACACCTCTGAGTTTCCTCTaGTGGGAGACAAAGGTATTGAGAGACATCTCTGAG +
Preference number: 6 (lower is better)
Translates to: GKCLPRTPLSFL*WETKVLRDISE
Trigger: CTCAGAGATGTCTCTCAATACCTTTGTCTCCCAGCAGAGGAAACTCAGAGGTGTCCTGGGAAGACATTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492681.1
ENST00000626925.1
CDS CCA 72 bp TCGCCAGTGGAAGGAGGCAAAGATATATGTGCAAGATaGCTCACCCAGGCTTTGTTAATACCGGTTGAGCAT +
Preference number: 6 (lower is better)
Translates to: SPVEGGKDICAR*LTQALLIPVEH
Trigger: ATGCTCAACCGGTATTAACAAAGCCTGGGTGAGCCATCTTGCACATATATCTTTGCCTCCTTCCACTGGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS TCA 72 bp CAGGATAGTGTGGTCGGTACACCCAAAGCTTGTGAATaGCTCCATCCAAAGAGCATCAGTCTGTATTCCCAT +
Preference number: 6 (lower is better)
Translates to: QDSVVGTPKACE*LHPKSISLYSH
Trigger: ATGGGAATACAGACTGATGCTCTTTGGATGGAGTCATTCACAAGCTTTGGGTGTACCGACCACACTATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468710.1
ENST00000629914.1
ENST00000651856.1
CDS GCA 72 bp AGTTCTGGCCAAGAGAATGAGAGCACAGGTGATATCTaGAGAGGAAGCTTCTGGGTCATGTCCTTAAAGAAC +
Preference number: 6 (lower is better)
Translates to: SSGQENESTGDI*RGSFWVMSLKN
Trigger: GTTCTTTAAGGACATGACCCAGAAGCTTCCTCTGCAGATATCACCTGTGCTCTCATTCTCTTGGCCAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS TCA 72 bp ATGACTCCATCCAAAGAGCATCAGTCTGTATTCCCATaGCCCCCAGTGTTGCTCTTGCTCCATTTTCTCTAT +
Preference number: 6 (lower is better)
Translates to: MTPSKEHQSVFP*PPVLLLLHFLY
Trigger: ATAGAGAAAATGGAGCAAGAGCAACACTGGGGGTCATGGGAATACAGACTGATGCTCTTTGGATGGAGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468710.1
ENST00000629914.1
ENST00000651856.1
CDS CAA 72 bp TGTCAGGAATTACCACGTGGGGATGGAAACCCAGGGTaGCCAGATGCTTACATTTTTAAGCTAGTAATTGGG +
Preference number: 6 (lower is better)
Translates to: CQELPRGDGNPG*PDAYIFKLVIG
Trigger: CCCAATTACTAGCTTAAAAATGTAAGCATCTGGCAACCCTGGGTTTCCATCCCCACGTGGTAATTCCTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS TCA 72 bp ATCACTCTCTTCTTGCTCCTCCGAATATTTATTGTGTaGCGCCTGACAGGAAGTAGAGGCTCTGTAAATGTG +
Preference number: 6 (lower is better)
Translates to: ITLFLLLRIFIV*RLTGSRGSVNV
Trigger: CACATTTACAGAGCCTCTACTTCCTGTCAGGCGTCACACAATAAATATTCGGAGGAGCAAGAAGAGAGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476764.2
ENST00000627844.1
CDS CAA 90 bp TACAGGACATGTCAGGAATTACCACGTGGGGATGGAAACCCAGGGTaGCCAGATGCTTACATTTTTAAGCTAGTAATTGGGAAATCTCTT +
Preference number: 6 (lower is better)
Translates to: YRTCQELPRGDGNPG*PDAYIFKLVIGKSL
Trigger: AAGAGATTTCCCAATTACTAGCTTAAAAATGTAAGCATCTGGCAACCCTGGGTTTCCATCCCCACGTGGTAATTCCTGACATGTCCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479425.5
ENST00000626785.1
CDS CAA 72 bp GCCAGGTCTTACCTCATTTCCCCTAAGGGTAGTATCTaGCAAAACTGTATTACCATATCACAACCAGGATAC +
Preference number: 6 (lower is better)
Translates to: ARSYLISPKGSI*QNCITISQPGY
Trigger: GTATCCTGGTTGTGATATGGTAATACAGTTTTGCAAGATACTACCCTTAGGGGAAATGAGGTAAGACCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS CAA 90 bp AGACTGGCAAAAACCAAAAGCTTGATGCATACTCTGTTGGTGAAATaGTGTGGAAATAGGCACTCATGCACTCCTGGAGGGAATGTAAAA +
Preference number: 6 (lower is better)
Translates to: RLAKTKSLMHTLLVK*CGNRHSCTPGGNVK
Trigger: TTTTACATTCCCTCCAGGAGTGCATGAGTGCCTATTTCCACACAATTTCACCAACAGAGTATGCATCAAGCTTTTGGTTTTTGCCAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS GCA 72 bp CCAGGTCTTACCTCATTTCCCCTAAGGGTAGTATCTTaGAAAACTGTATTACCATATCACAACCAGGATACT +
Preference number: 6 (lower is better)
Translates to: PGLTSFPLRVVS*KTVLPYHNQDT
Trigger: AGTATCCTGGTTGTGATATGGTAATACAGTTTTGCAAGATACTACCCTTAGGGGAAATGAGGTAAGACCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS CCA 72 bp TTGAGTGCTGACATGATGCTCCAGGGAAATACTCATTaGAGCACTTTGGATTTTGGATTTTCAGATCAGAGA +
Preference number: 6 (lower is better)
Translates to: LSADMMLQGNTH*STLDFGFSDQR
Trigger: TCTCTGATCTGAAAATCCAAAATCCAAAGTGCTCCAATGAGTATTTCCCTGGAGCATCATGTCAGCACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS CAA 72 bp AGACTGGCAAAAACCAAAAGCTTGATGCATACTCTGTaGGTGAAATTGTGTGGAAATAGGCACTCATGCACT +
Preference number: 6 (lower is better)
Translates to: RLAKTKSLMHTL*VKLCGNRHSCT
Trigger: AGTGCATGAGTGCCTATTTCCACACAATTTCACCAACAGAGTATGCATCAAGCTTTTGGTTTTTGCCAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS CAA 72 bp CTTCAAAATACCAGTCAACCAATTCTAGAATCACTGTaGCAGGAGTGGAAGGATCTAAGATCACCAGTCCAA +
Preference number: 6 (lower is better)
Translates to: LQNTSQPILESL*QEWKDLRSPVQ
Trigger: TTGGACTGGTGATCTTAGATCCTTCCACTCCTGCAACAGTGATTCTAGAATTGGTTGACTGGTATTTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS CCA 72 bp GCTCCAGGGAAATACTCATTGGAGCACTTTGGATTTTaGATTTTCAGATCAGAGATGCTGAGCAAGTATAAT +
Preference number: 6 (lower is better)
Translates to: APGKYSLEHFGF*IFRSEMLSKYN
Trigger: ATTATACTTGCTCAGCATCTCTGATCTGAAAATCCAAAATCCAAAGTGCTCCAATGAGTATTTCCCTGGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS CAA 72 bp CATTTCCCACCTATCAGACTGGCAAAAACCAAAAGCTaGATGCATACTCTGTTGGTGAAATTGTGTGGAAAT +
Preference number: 6 (lower is better)
Translates to: HFPPIRLAKTKS*MHTLLVKLCGN
Trigger: ATTTCCACACAATTTCACCAACAGAGTATGCATCAAGCTTTTGGTTTTTGCCAGTCTGATAGGTGGGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS CAA 72 bp GAGGTAGATACCAACAGATATAACCTGCCAATGAGCTaGTCTGGTACTTTCTTCAAAATACCAGTCAACCAA +
Preference number: 6 (lower is better)
Translates to: EVDTNRYNLPMS*SGTFFKIPVNQ
Trigger: TTGGTTGACTGGTATTTTGAAGAAAGTACCAGACAAGCTCATTGGCAGGTTATATCTGTTGGTATCTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2
CDS TCA 72 bp AATCCAATAATCCCAAATCTGAAATGTTCCAAAATCTaGATTTTGAGTGCTGACATGATGCTCCAGGGAAAT +
Preference number: 6 (lower is better)
Translates to: NPIIPNLKCSKI*ILSADMMLQGN
Trigger: ATTTCCCTGGAGCATCATGTCAGCACTCAAAATTCAGATTTTGGAACATTTCAGATTTGGGATTATTGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495285.1
ENST00000627756.2