Pregenerated sensors for BCS1L (Homo sapiens)
Ensembl gene IDs: ENSG00000074582Ensembl transcript IDs: ENST00000359273.8, ENST00000392109.5, ENST00000392110.6, ENST00000392111.7, ENST00000412366.5, ENST00000423377.5, ENST00000426649.5, ENST00000428880.5, ENST00000430322.5, ENST00000431802.5, ENST00000436603.1, ENST00000439945.5, ENST00000443791.5, ENST00000456050.5, ENST00000460579.5, ENST00000465706.1, ENST00000471576.5, ENST00000477422.5, ENST00000490188.1, ENST00000493376.1, ENST00000643945.1
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCCAGCCTGATCACCTCCTCAGAGACTCAGCATTGTGAATTGCCCCTACAGGGTGTGGCAGATGTTTATTaGGCTAGAGGAGGAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: PSLITSSETQHCELPLQGVADVY*ARGGEL Trigger: CAGCTCTCCTCCTCTAGCTCAATAAACATCTGCCAC...ACCCTGTAGGGGCAATTCACAATGCTGAGTCTCTGAGGAGGTGATCAGGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| 3UTR TCA 72 bp | GCCCAGCCTGATCACCTCCTCAGAGACTCAGCATTGTaGATTGCCCCTACAGGGTCATTTTTATACAGCATG | + |
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Preference number: 3 (lower is better) Translates to: AQPDHLLRDSAL*IAPTGSFLYSM Trigger: CATGCTGTATAAAAATGACCCTGTAGGGGCAATTCACAATGCTGAGTCTCTGAGGAGGTGATCAGGCTGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR TCA 90 bp | CCCAGCCTGATCACCTCCTCAGAGACTCAGCATTGTGAATTGCCCCTACAGGGTGGAGGAGAGCTGAGCTaGGCCCAGCCTGATCACCTC | + |
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Preference number: 4 (lower is better) Translates to: PSLITSSETQHCELPLQGGGELS*AQPDHL Trigger: GAGGTGATCAGGCTGGGCTCAGCTCAGCTCTCCTCC...ACCCTGTAGGGGCAATTCACAATGCTGAGTCTCTGAGGAGGTGATCAGGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR TCA 90 bp | GAAGTAGCCCTGCACCTGGGCAGGACTGATCTGGTTTGTAGCTCGAAGGACATGGAGCTGAGCCCAGCCTaGTCACCTCCTCAGAGACTC | + |
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Preference number: 4 (lower is better) Translates to: EVALHLGRTDLVCSSKDMELSPA*SPPQRL Trigger: GAGTCTCTGAGGAGGTGATCAGGCTGGGCTCAGCTC...CATGTCCTTCGAGCTACAAACCAGATCAGTCCTGCCCAGGTGCAGGGCTACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR GCA 90 bp | TGCACCTGGGCAGGACTGATCTGGTTTGTAGCTCGAAGGACATGTTCTGCAAAGAGTACCAGGCTCTGCTaGGGGGCCACGCTCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CTWAGLIWFVARRTCSAKSTRLC*GATLSR Trigger: CCTGCTGAGCGTGGCCCCGCAGCAGAGCCTGGTACT...CTTTGCAGAACATGTCCTTCGAGCTACAAACCAGATCAGTCCTGCCCAGGTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR GCA 90 bp | CTGATCACCTCCTCAGAGACTCAGCATTGTGAATTGCCCCTACAGGGTCATTTTAGGAGTACCAGGCTCTaGTGCGGGGCCACGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: LITSSETQHCELPLQGHFRSTRL*CGATLS Trigger: GCTGAGCGTGGCCCCGCAGCAGAGCCTGGTACTCCT...AAAATGACCCTGTAGGGGCAATTCACAATGCTGAGTCTCTGAGGAGGTGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR TCA 90 bp | TGGGCAGGACTGATCTGGTTTGTAGCTCGAAGGACATGTTCTGCAAAGTTCTCACGTGGTTGGTGGTCATaGACACGATGCGGGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: WAGLIWFVARRTCSAKFSRGWWS*TRCGPR Trigger: CCGAGGCCCGCATCGTGTTCATGACCACCAACCACG...TGAGAACTTTGCAGAACATGTCCTTCGAGCTACAAACCAGATCAGTCCTGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR CCA 90 bp | CCCAGCCTGATCACCTCCTCAGAGACTCAGCATTGTGAATTGCCCCTACAGGGTAGGCGACCTAGGCCTTaGTACTTTACTGGGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSLITSSETQHCELPLQGRRPRP*YFTGFS Trigger: GGAGAACCCAGTAAAGTACCAAGGCCTAGGTCGCCT...ACCCTGTAGGGGCAATTCACAATGCTGAGTCTCTGAGGAGGTGATCAGGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR CCA 90 bp | GTAGCCCTGCACCTGGGCAGGACTGATCTGGTTTGTAGCTCGAAGGACATGTTCAGGTGCCTGTCAACGTaGTTGGTGGTCATGAACACG | + |
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Preference number: 4 (lower is better) Translates to: VALHLGRTDLVCSSKDMFRCLST*LVVMNT Trigger: CGTGTTCATGACCACCAACCACGTTGACAGGCACCT...GAACATGTCCTTCGAGCTACAAACCAGATCAGTCCTGCCCAGGTGCAGGGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR TCA 90 bp | CCTCCTCAGAGACTCAGCATTGTGAATTGCCCCTACAGGGTCATTTTTATACAGCGCTCAGCAGGTGGTTaGGTCGGTCATCAGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PPQRLSIVNCPYRVIFIQRSAGG*VGHQRG Trigger: GCCTCTCTGATGACCGACTCAACCACCTGCTGAGCG...CTGTATAAAAATGACCCTGTAGGGGCAATTCACAATGCTGAGTCTCTGAGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR TCA 90 bp | GAAGTAGCCCTGCACCTGGGCAGGACTGATCTGGTTTGTAGCTCGAAGGACATGCATTTTTATACAGCATaGAGTAGCCCTGCACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EVALHLGRTDLVCSSKDMHFYTA*SSPAPG Trigger: CCCAGGTGCAGGGCTACTTCATGCTGTATAAAAATG...CATGTCCTTCGAGCTACAAACCAGATCAGTCCTGCCCAGGTGCAGGGCTACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR CCA 90 bp | CTCAGCATTGTGAATTGCCCCTACAGGGTCATTTTTATACAGCATGAAGTAGCCCGATGCGGGCCTCGGTaGAAGCCACACCATCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LSIVNCPYRVIFIQHEVARCGPR*KPHHPR Trigger: CCTTGGATGGTGTGGCTTCCACCGAGGCCCGCATCG...GGCTACTTCATGCTGTATAAAAATGACCCTGTAGGGGCAATTCACAATGCTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR GCA 90 bp | CTCAGCATTGTGAATTGCCCCTACAGGGTCATTTTTATACAGCATGAAGTAGCCGGCTCAGCAGGCAGATaGTGTGCTCCAGTTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSIVNCPYRVIFIQHEVAGSAGR*CAPVPQ Trigger: CTGGGGAACTGGAGCACAGCATCTGCCTGCTGAGCC...GGCTACTTCATGCTGTATAAAAATGACCCTGTAGGGGCAATTCACAATGCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR CCA 90 bp | CCTCAGAGACTCAGCATTGTGAATTGCCCCTACAGGGTCATTTTTATACAGCATGCCACGCTCAGCAGGTaGTTGAGTCGGTCATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PQRLSIVNCPYRVIFIQHATLSR*LSRSSE Trigger: CTCTGATGACCGACTCAACCACCTGCTGAGCGTGGC...ATGCTGTATAAAAATGACCCTGTAGGGGCAATTCACAATGCTGAGTCTCTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR TCA 90 bp | TGGGCAGGACTGATCTGGTTTGTAGCTCGAAGGACATGTTCTGCAAAGTTCTCAGTGGCAGATGTTTATTaGGCTAGAGGAGGAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: WAGLIWFVARRTCSAKFSVADVY*ARGGEL Trigger: CAGCTCTCCTCCTCTAGCTCAATAAACATCTGCCAC...TGAGAACTTTGCAGAACATGTCCTTCGAGCTACAAACCAGATCAGTCCTGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR TCA 90 bp | CCTCAGAGACTCAGCATTGTGAATTGCCCCTACAGGGTCATTTTTATACAGCATCAGCCAAGTCTCGACTaGGAAAAGCAGCATCCACAT | + |
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Preference number: 4 (lower is better) Translates to: PQRLSIVNCPYRVIFIQHQPSLD*EKQHPH Trigger: ATGTGGATGCTGCTTTTCTCAGTCGAGACTTGGCTG...ATGCTGTATAAAAATGACCCTGTAGGGGCAATTCACAATGCTGAGTCTCTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR TCA 90 bp | TCCTCAGAGACTCAGCATTGTGAATTGCCCCTACAGGGTCATTTTTATACAGCAAGAGACTCAGCATTGTaGATTGCCCCTACAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SSETQHCELPLQGHFYTARDSAL*IAPTGS Trigger: TGACCCTGTAGGGGCAATTCACAATGCTGAGTCTCT...TGCTGTATAAAAATGACCCTGTAGGGGCAATTCACAATGCTGAGTCTCTGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS-3UTR GCA 90 bp | TGGGCAGGACTGATCTGGTTTGTAGCTCGAAGGACATGTTCTGCAAAGTTCTCACTCAGCATTGTGAATTaGCCCTACAGGGTCATTTTT | + |
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Preference number: 4 (lower is better) Translates to: WAGLIWFVARRTCSAKFSLSIVN*PYRVIF Trigger: AAAAATGACCCTGTAGGGGCAATTCACAATGCTGAG...TGAGAACTTTGCAGAACATGTCCTTCGAGCTACAAACCAGATCAGTCCTGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS GCA 90 bp | GTCTCGAGCAGGGACTTCCAGTGTGATCATGTAATGGCGCCGGAATaGCACCAGGCCCAGTTGGACACCCTTCCGGGCCAGGGCCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: VSSRDFQCDHVMAPE*HQAQLDTLPGQGQG Trigger: GCCCTGGCCCTGGCCCGGAAGGGTGTCCAACTGGGCCTGGTGGCATTCCGGCGCCATTACATGATCACACTGGAAGTCCCTGCTCGAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000423377.5 ENST00000428880.5 ENST00000430322.5 ENST00000431802.5 ENST00000439945.5 ENST00000456050.5 ENST00000471576.5 ENST00000493376.1 ENST00000643945.1 |
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| CDS CCA 90 bp | TCCTCCAGGAGTACCAGGCTCTGCTGCGGGGCCACGCTCAGCAGGTaGTTGAGTCGGTCATCAGAGAGGCTGGAGTCCGTGAGGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SSRSTRLCCGATLSR*LSRSSERLESVRLS Trigger: GCTGAGCCTCACGGACTCCAGCCTCTCTGATGACCGACTCAACCACCTGCTGAGCGTGGCCCCGCAGCAGAGCCTGGTACTCCTGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000436603.1 ENST00000439945.5 ENST00000460579.5 ENST00000477422.5 |
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| CDS TCA 90 bp | CTGCCCTGGATAGAACCTCTGGAACATCTGGGTCAGCTGCCAGTGTaGGCAGTAGCCCACGTACTCCTTCAGGTCCACTCGCCCCGGGCG | + |
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Preference number: 5 (lower is better) Translates to: LPWIEPLEHLGQLPV*AVAHVLLQVHSPRA Trigger: CGCCCGGGGCGAGTGGACCTGAAGGAGTACGTGGGCTACTGCTCACACTGGCAGCTGACCCAGATGTTCCAGAGGTTCTATCCAGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000439945.5 ENST00000460579.5 ENST00000465706.1 ENST00000477422.5 |
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| CDS GCA 90 bp | TTGTTTCTAGTACACCTCTCCTCCAACCCCGAACCCCGGCCACTTTaGCCTGCGCCTGGCATGCAGGGAGGTGAGCTGACAGCAGTGACC | + |
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Preference number: 5 (lower is better) Translates to: LFLVHLSSNPEPRPL*PAPGMQGGELTAVT Trigger: GGTCACTGCTGTCAGCTCACCTCCCTGCATGCCAGGCGCAGGGCAAAGTGGCCGGGGTTCGGGGTTGGAGGAGAGGTGTACTAGAAACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431802.5 |
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| CDS GCA 90 bp | CGACTGAGAAAAGCAGCATCCACATCCTCCAGGAGTACCAGGCTCTaGTGCGGGGCCACGCTCAGCAGGTGGTTGAGTCGGTCATCAGAG | + |
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Preference number: 5 (lower is better) Translates to: RLRKAASTSSRSTRL*CGATLSRWLSRSSE Trigger: CTCTGATGACCGACTCAACCACCTGCTGAGCGTGGCCCCGCAGCAGAGCCTGGTACTCCTGGAGGATGTGGATGCTGCTTTTCTCAGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000436603.1 ENST00000439945.5 ENST00000460579.5 ENST00000477422.5 |
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| CDS CCA 90 bp | AGCAGGCAGATGCTGTGCTCCAGTTCCCCAGCCAGGGCTGTGCTATaGAGCATGGGATGGCAGGAGGTAGCAGGCAACCTGGAAATGCTT | + |
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Preference number: 5 (lower is better) Translates to: SRQMLCSSSPARAVL*SMGWQEVAGNLEML Trigger: AAGCATTTCCAGGTTGCCTGCTACCTCCTGCCATCCCATGCTCCATAGCACAGCCCTGGCTGGGGAACTGGAGCACAGCATCTGCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460579.5 |
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| CDS-3UTR CAA 90 bp | GTAGCCCTGCACCTGGGCAGGACTGATCTGGTTTGTAGCTCGAAGGACATGTTCACGCTCAGCAGGTGGTaGAGTCGGTCATCAGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: VALHLGRTDLVCSSKDMFTLSRW*SRSSER Trigger: CCTCTCTGATGACCGACTCAACCACCTGCTGAGCGT...GAACATGTCCTTCGAGCTACAAACCAGATCAGTCCTGCCCAGGTGCAGGGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS GCA 90 bp | GTGCCCAGGGCCGTGAAGGTGACAGATTCCCAAGGAGTCCCCGTCTaGAAGTCTATCATCTGCATCTCTCGACTTCGTTCTACCCGAATC | + |
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Preference number: 5 (lower is better) Translates to: VPRAVKVTDSQGVPV*KSIICISRLRSTRI Trigger: GATTCGGGTAGAACGAAGTCGAGAGATGCAGATGATAGACTTGCAGACGGGGACTCCTTGGGAATCTGTCACCTTCACGGCCCTGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000430322.5 ENST00000431802.5 ENST00000439945.5 ENST00000443791.5 ENST00000456050.5 ENST00000471576.5 ENST00000493376.1 ENST00000643945.1 |
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| CDS CCA 90 bp | CAGGGAGGTGAGCTGACAGCAGTGACCTCGGCTGAGCCTCAGAACTaGGATCCAGAATTCCAAAACACCTATGCATGGAAGGCCACAGAC | + |
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Preference number: 5 (lower is better) Translates to: QGGELTAVTSAEPQN*DPEFQNTYAWKATD Trigger: GTCTGTGGCCTTCCATGCATAGGTGTTTTGGAATTCTGGATCCCAGTTCTGAGGCTCAGCCGAGGTCACTGCTGTCAGCTCACCTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431802.5 |
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| CDS GCA 90 bp | CAGATCTTTCATCATAGGGATCAGCTCCAATACCATATCTCTCTCTaGTCCAGCACCTTCAATGGCTGGCTCCCAGCAGACCCCGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: QIFHHRDQLQYHISL*SSTFNGWLPADPAV Trigger: CACGGCGGGGTCTGCTGGGAGCCAGCCATTGAAGGTGCTGGAGCAGAGAGAGATATGGTATTGGAGCTGATCCCTATGATGAAAGATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423377.5 |
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| CDS TCA 90 bp | CTAGGCCTTGGTACTTTACTGGGTTCTCCACAGCCAAGTCTCGACTaGGAAAAGCAGCATCCACATCCTCCAGGAGTACCAGGCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LGLGTLLGSPQPSLD*EKQHPHPPGVPGSA Trigger: AGCAGAGCCTGGTACTCCTGGAGGATGTGGATGCTGCTTTTCTCAGTCGAGACTTGGCTGTGGAGAACCCAGTAAAGTACCAAGGCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000436603.1 ENST00000439945.5 ENST00000460579.5 ENST00000477422.5 |
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| CDS TCA 90 bp | CCCAGCTACTCTCCTCACCGCCTGGGGACATGTGTCTCAGAGGCCTaGCTTCTACCTCACACCCTGATGTTCCACACGTTTCATGTTTAT | + |
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Preference number: 5 (lower is better) Translates to: PSYSPHRLGTCVSEA*LLPHTLMFHTFHVY Trigger: ATAAACATGAAACGTGTGGAACATCAGGGTGTGAGGTAGAAGTCAGGCCTCTGAGACACATGTCCCCAGGCGGTGAGGAGAGTAGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460579.5 |
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| CDS GCA 90 bp | AAGGTGACAGATTCCCAAGGAGTCCCCGTCTGCAAGTCTATCATCTaGATCTCTCGACTTCGTTCTACCCGAATCCATTTCCCCCGATAC | + |
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Preference number: 5 (lower is better) Translates to: KVTDSQGVPVCKSII*ISRLRSTRIHFPRY Trigger: GTATCGGGGGAAATGGATTCGGGTAGAACGAAGTCGAGAGATGCAGATGATAGACTTGCAGACGGGGACTCCTTGGGAATCTGTCACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000430322.5 ENST00000431802.5 ENST00000439945.5 ENST00000443791.5 ENST00000456050.5 ENST00000471576.5 ENST00000493376.1 ENST00000643945.1 |
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| CDS CCA 90 bp | GGAATGCCTCTGTCAGTGTACCACTTGGGGTTATCGATGAATTCCTaGACGTCTCTGACAATTCGGTCAGCCAGACCCTGTTGTAGAACC | + |
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Preference number: 5 (lower is better) Translates to: GMPLSVYHLGLSMNS*TSLTIRSARPCCRT Trigger: GGTTCTACAACAGGGTCTGGCTGACCGAATTGTCAGAGACGTCCAGGAATTCATCGATAACCCCAAGTGGTACACTGACAGAGGCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000431802.5 ENST00000439945.5 ENST00000443791.5 ENST00000460579.5 ENST00000471576.5 ENST00000477422.5 |
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| CDS-3UTR CAA 90 bp | AATTGCCCCTACAGGGTCATTTTTATACAGCATGAAGTAGCCCTGCACCTGGGCACACCATCCAAGGCATaGAGCAGTCCACTGAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: NCPYRVIFIQHEVALHLGTPSKA*SSPLKV Trigger: CACCTTCAGTGGACTGCTCAATGCCTTGGATGGTGT...GCCCAGGTGCAGGGCTACTTCATGCTGTATAAAAATGACCCTGTAGGGGCAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS GCA 90 bp | ATATGTTCAACAAGTAAGCAACCTCCCAACTCCTTGCTCATGCAGTaGTCTTGGCTCGGAATGCCCGTTCTTTTCTCCCTCATTCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: ICSTSKQPPNSLLMQ*SWLGMPVLFSLILP Trigger: GGGGAGAATGAGGGAGAAAAGAACGGGCATTCCGAGCCAAGAGCACTGCATGAGCAAGGAGTTGGGAGGTTGCTTACTTGTTGAACATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000392109.5 ENST00000392111.7 ENST00000431802.5 ENST00000490188.1 ENST00000643945.1 |
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| CDS-3UTR CAA 90 bp | TGCCCCTACAGGGTCATTTTTATACAGCATGAAGTAGCCCTGCACCTGGGCAGGACTCAGCATTGTGAATaGCCCCTACAGGGTCATTTT | + |
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Preference number: 5 (lower is better) Translates to: CPYRVIFIQHEVALHLGRTQHCE*PLQGHF Trigger: AAAATGACCCTGTAGGGGCAATTCACAATGCTGAGT...CCTGCCCAGGTGCAGGGCTACTTCATGCTGTATAAAAATGACCCTGTAGGGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS TCA 90 bp | TCCAGCCCCAAAGTAGGGATTGTCCTTCAGAGCCAGAATAAAGTCTaGAAGTGGCATCTTGAAAGGGAAACACCAAACCTTACAGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: SSPKVGIVLQSQNKV*KWHLERETPNLTGP Trigger: AGGGCCTGTAAGGTTTGGTGTTTCCCTTTCAAGATGCCACTTTCAGACTTTATTCTGGCTCTGAAGGACAATCCCTACTTTGGGGCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000423377.5 ENST00000428880.5 ENST00000430322.5 ENST00000431802.5 ENST00000439945.5 ENST00000456050.5 ENST00000493376.1 ENST00000643945.1 |
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| CDS GCA 90 bp | ATACGCAACAAATATGTTCAACAAGTAAGCAACCTCCCAACTCCTTaGTCATGCAGTGCTCTTGGCTCGGAATGCCCGTTCTTTTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: IRNKYVQQVSNLPTP*SCSALGSECPFFSP Trigger: GGGAGAAAAGAACGGGCATTCCGAGCCAAGAGCACTGCATGAGCAAGGAGTTGGGAGGTTGCTTACTTGTTGAACATATTTGTTGCGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000392109.5 ENST00000392111.7 ENST00000431802.5 ENST00000490188.1 ENST00000643945.1 |
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| CDS-3UTR CAA 90 bp | CCTCAGAGACTCAGCATTGTGAATTGCCCCTACAGGGTCATTTTTATACAGCATTGCCTGTCAACGTGGTaGGTGGTCATGAACACGATG | + |
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Preference number: 5 (lower is better) Translates to: PQRLSIVNCPYRVIFIQHCLSTW*VVMNTM Trigger: CATCGTGTTCATGACCACCAACCACGTTGACAGGCA...ATGCTGTATAAAAATGACCCTGTAGGGGCAATTCACAATGCTGAGTCTCTGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS GCA 90 bp | AACAAATATGTTCAACAAGTAAGCAACCTCCCAACTCCTTGCTCATaGAGTGCTCTTGGCTCGGAATGCCCGTTCTTTTCTCCCTCATTC | + |
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Preference number: 5 (lower is better) Translates to: NKYVQQVSNLPTPCS*SALGSECPFFSPSF Trigger: GAATGAGGGAGAAAAGAACGGGCATTCCGAGCCAAGAGCACTGCATGAGCAAGGAGTTGGGAGGTTGCTTACTTGTTGAACATATTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000392109.5 ENST00000392111.7 ENST00000431802.5 ENST00000490188.1 ENST00000643945.1 |
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| CDS CCA 72 bp | GCCCTCCGTCTCGATGGTTTCACCGCGCCTGCACCTTaGGGAAGCTGCGTTCGGCCCCGCCCCGGGTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ALRLDGFTAPAP*GSCVRPRPGSF Trigger: AAAGGACCCGGGGCGGGGCCGAACGCAGCTTCCCCAAGGTGCAGGCGCGGTGAAACCATCGAGACGGAGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443791.5 |
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| CDS TCA 72 bp | GAGTGGCTTCCACATCCCCAATATCCTAGAGGCGGCTaGGCCGGAGGCGGTCGCACAAAGCGGGCCCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: EWLPHPQYPRGG*AGGGRTKRAPG Trigger: CCCCGGGGCCCGCTTTGTGCGACCGCCTCCGGCTCAGCCGCCTCTAGGATATTGGGGATGTGGAAGCCACTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456050.5 |
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| CDS CCA 72 bp | CACGCGGTGAGTCAGAGCCAGAGGCAGGTGGGAACCTaGGTCGCTAGGCCGGGGCCCGTTGTTTCTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HAVSQSQRQVGT*VARPGPVVSPG Trigger: GCCTGGAGAAACAACGGGCCCCGGCCTAGCGACCCAGGTTCCCACCTGCCTCTGGCTCTGACTCACCGCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000428880.5 ENST00000430322.5 |
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| CDS GCA 72 bp | GTACACCTCTCCTCCAACCCCGAACCCCGGCCACTTTaGCCTGCGCCTGGCATGCAGGGAGGTGAGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: VHLSSNPEPRPL*PAPGMQGGELT Trigger: TGTCAGCTCACCTCCCTGCATGCCAGGCGCAGGGCAAAGTGGCCGGGGTTCGGGGTTGGAGGAGAGGTGTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431802.5 |
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| CDS CAA 72 bp | ACCAGGCTCTGCTGCGGGGCCACGCTCAGCAGGTGGTaGAGTCGGTCATCAGAGAGGCTGGAGTCCGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TRLCCGATLSRW*SRSSERLESVR Trigger: CCTCACGGACTCCAGCCTCTCTGATGACCGACTCAACCACCTGCTGAGCGTGGCCCCGCAGCAGAGCCTGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000436603.1 ENST00000439945.5 ENST00000460579.5 ENST00000477422.5 |
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| CDS CAA 90 bp | TCCAGGAGTACCAGGCTCTGCTGCGGGGCCACGCTCAGCAGGTGGTaGAGTCGGTCATCAGAGAGGCTGGAGTCCGTGAGGCTCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSTRLCCGATLSRW*SRSSERLESVRLSR Trigger: CCTGCTGAGCCTCACGGACTCCAGCCTCTCTGATGACCGACTCAACCACCTGCTGAGCGTGGCCCCGCAGCAGAGCCTGGTACTCCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000436603.1 ENST00000439945.5 ENST00000460579.5 ENST00000477422.5 |
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| CDS CCA 72 bp | AGGCCCTGGGGTGTTACGAAAACCGCCGTGACTCTCTaGCCCTCCGTCTCGATGGTTTCACCGCGCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RPWGVTKTAVTL*PSVSMVSPRLH Trigger: GTGCAGGCGCGGTGAAACCATCGAGACGGAGGGCCAGAGAGTCACGGCGGTTTTCGTAACACCCCAGGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000359273.8 |
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| CDS CCA 72 bp | AGTACCAGGCTCTGCTGCGGGGCCACGCTCAGCAGGTaGTTGAGTCGGTCATCAGAGAGGCTGGAGTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: STRLCCGATLSR*LSRSSERLESV Trigger: CACGGACTCCAGCCTCTCTGATGACCGACTCAACCACCTGCTGAGCGTGGCCCCGCAGCAGAGCCTGGTACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000436603.1 ENST00000439945.5 ENST00000460579.5 ENST00000477422.5 |
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| CDS CCA 72 bp | ACGAAAACCCCAGCTCGCGCCTCCAGCCACATGGTTTaGGGTAACCCGTCACTCAGCCCTCTCACCGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: TKTPARASSHMV*GNPSLSPLTAV Trigger: CACGGCGGTGAGAGGGCTGAGTGACGGGTTACCCCAAACCATGTGGCTGGAGGCGCGAGCTGGGGTTTTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412366.5 |
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| CDS CCA 72 bp | CCCGAATCCATTTCCCCCGATACCGCCGTGACTCTCTaGCCCTCCGTCTCGATGGTTTCACCGCGCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PESISPDTAVTL*PSVSMVSPRLH Trigger: GTGCAGGCGCGGTGAAACCATCGAGACGGAGGGCCAGAGAGTCACGGCGGTATCGGGGGAAATGGATTCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443791.5 |
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| CDS TCA 72 bp | GGGCAGGGTCCAGCCTGTCAACGTGGTTGGTGGTCATaGACACGATGCGGGCCTCGGTGGAAGCCACACCAT | + |
|
Preference number: 6 (lower is better) Translates to: GQGPACQRGWWS*TRCGPRWKPHH Trigger: ATGGTGTGGCTTCCACCGAGGCCCGCATCGTGTTCATGACCACCAACCACGTTGACAGGCTGGACCCTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000439945.5 ENST00000460579.5 ENST00000465706.1 ENST00000477422.5 |
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| CDS GCA 72 bp | AAAGCAGCATCCACATCCTCCAGGAGTACCAGGCTCTaGTGCGGGGCCACGCTCAGCAGGTGGTTGAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: KAASTSSRSTRL*CGATLSRWLSR Trigger: CCGACTCAACCACCTGCTGAGCGTGGCCCCGCAGCAGAGCCTGGTACTCCTGGAGGATGTGGATGCTGCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000436603.1 ENST00000439945.5 ENST00000460579.5 ENST00000477422.5 |
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| CDS GCA 72 bp | AGGGACTTCCAGTGTGATCATGTAATGGCGCCGGAATaGCACCAGGCCCAGTTGGACACCCTTCCGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RDFQCDHVMAPE*HQAQLDTLPGQ Trigger: CTGGCCCGGAAGGGTGTCCAACTGGGCCTGGTGGCATTCCGGCGCCATTACATGATCACACTGGAAGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000423377.5 ENST00000428880.5 ENST00000430322.5 ENST00000431802.5 ENST00000439945.5 ENST00000456050.5 ENST00000471576.5 ENST00000493376.1 ENST00000643945.1 |
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| CDS CAA 72 bp | ATGCGGGCCTCGGTGGAAGCCACACCATCCAAGGCATaGAGCAGTCCACTGAAGGTGAGGCGACCTAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: MRASVEATPSKA*SSPLKVRRPRP Trigger: AGGCCTAGGTCGCCTCACCTTCAGTGGACTGCTCAATGCCTTGGATGGTGTGGCTTCCACCGAGGCCCGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000436603.1 ENST00000439945.5 ENST00000460579.5 ENST00000465706.1 ENST00000477422.5 |
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| CDS TCA 72 bp | AGGCATAGCTCCTGTCTCGAGCAGGGACTTCCAGTGTaGTCATGTAATGGCGCCGGAATGCCACCAGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RHSSCLEQGLPV*SCNGAGMPPGP Trigger: TGGGCCTGGTGGCATTCCGGCGCCATTACATGATCACACTGGAAGTCCCTGCTCGAGACAGGAGCTATGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000423377.5 ENST00000428880.5 ENST00000430322.5 ENST00000431802.5 ENST00000439945.5 ENST00000456050.5 ENST00000471576.5 ENST00000493376.1 ENST00000643945.1 |
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| CDS TCA 72 bp | GCTAAGGAAGGTGCCTGTCAACGTGGTTGGTGGTCATaGACACGATGCGGGCCTCGGTGGAAGCCACACCAT | + |
|
Preference number: 6 (lower is better) Translates to: AKEGACQRGWWS*TRCGPRWKPHH Trigger: ATGGTGTGGCTTCCACCGAGGCCCGCATCGTGTTCATGACCACCAACCACGTTGACAGGCACCTTCCTTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436603.1 |
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| CDS CAA 90 bp | ATGAACACGATGCGGGCCTCGGTGGAAGCCACACCATCCAAGGCATaGAGCAGTCCACTGAAGGTGAGGCGACCTAGGCCTTGGTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: MNTMRASVEATPSKA*SSPLKVRRPRPWYF Trigger: AAAGTACCAAGGCCTAGGTCGCCTCACCTTCAGTGGACTGCTCAATGCCTTGGATGGTGTGGCTTCCACCGAGGCCCGCATCGTGTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000436603.1 ENST00000439945.5 ENST00000460579.5 ENST00000465706.1 ENST00000477422.5 |
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| CDS GCA 72 bp | ACAGCTGTGTACATCACGGTCTTCCCTTCCTCCTGCTaGAAGGCTAGCTCTCGAGCTTTCGGTCAGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TAVYITVFPSSC*KASSRAFGQCP Trigger: TGGGCACTGACCGAAAGCTCGAGAGCTAGCCTTGCAGCAGGAGGAAGGGAAGACCGTGATGTACACAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471576.5 |
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| CDS CAA 72 bp | TGCTGCAAGGCTAGCTCTCGAGCTTCCTCCAGGATGTaGAAGAAAACCTTTCGGTCAGTGCCCAGGGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: CCKASSRASSRM*KKTFRSVPRAV Trigger: CACGGCCCTGGGCACTGACCGAAAGGTTTTCTTCAACATCCTGGAGGAAGCTCGAGAGCTAGCCTTGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000430322.5 ENST00000431802.5 ENST00000439945.5 ENST00000443791.5 ENST00000456050.5 |
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| CDS TCA 72 bp | ATAGAACCTCTGGAACATCTGGGTCAGCTGCCAGTGTaGGCAGTAGCCCACGTACTCCTTCAGGTCCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: IEPLEHLGQLPV*AVAHVLLQVHS Trigger: CGAGTGGACCTGAAGGAGTACGTGGGCTACTGCTCACACTGGCAGCTGACCCAGATGTTCCAGAGGTTCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000439945.5 ENST00000460579.5 ENST00000465706.1 ENST00000477422.5 |
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| CDS GCA 72 bp | ACAGCTGTGTACATCACGGTCTTCCCTTCCTCCTGCTaGAAGGCTAGCTCTCGAGCTTCCTCCAGGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TAVYITVFPSSC*KASSRASSRML Trigger: CAACATCCTGGAGGAAGCTCGAGAGCTAGCCTTGCAGCAGGAGGAAGGGAAGACCGTGATGTACACAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000430322.5 ENST00000431802.5 ENST00000439945.5 ENST00000443791.5 ENST00000456050.5 |
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| CDS GCA 72 bp | ACAGCTGTGTACATCACGGTCTTCCCTTCCTCCTGCTaGAAGGCTAGCTCTCGAGCTGGGAAGGAGAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: TAVYITVFPSSC*KASSRAGKEKM Trigger: CATCTTCTCCTTCCCAGCTCGAGAGCTAGCCTTGCAGCAGGAGGAAGGGAAGACCGTGATGTACACAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477422.5 |
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| CDS CCA 72 bp | CAGAACTGGGATCCAGAATTCCAAAACACCTATGCATaGAAGGCCACAGACAAAGCTCTCCCGTCCCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QNWDPEFQNTYA*KATDKALPSPA Trigger: GGCCGGGGACGGGAGAGCTTTGTCTGTGGCCTTCCATGCATAGGTGTTTTGGAATTCTGGATCCCAGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431802.5 |
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| CDS CCA 72 bp | TTGAGCAGTCCACTGAAGGTGAGGCGACCTAGGCCTTaGTACTTTACTGGGTTCTCCACAGCCAAGTCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: LSSPLKVRRPRP*YFTGFSTAKSR Trigger: TCGAGACTTGGCTGTGGAGAACCCAGTAAAGTACCAAGGCCTAGGTCGCCTCACCTTCAGTGGACTGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000436603.1 ENST00000439945.5 ENST00000460579.5 ENST00000477422.5 |
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| CDS GCA 72 bp | GCCGTGAAGGTGACAGATTCCCAAGGAGTCCCCGTCTaGAAGTCTATCATCTGCATCTCTCGACTTCGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AVKVTDSQGVPV*KSIICISRLRS Trigger: AGAACGAAGTCGAGAGATGCAGATGATAGACTTGCAGACGGGGACTCCTTGGGAATCTGTCACCTTCACGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000430322.5 ENST00000431802.5 ENST00000439945.5 ENST00000443791.5 ENST00000456050.5 ENST00000471576.5 ENST00000493376.1 ENST00000643945.1 |
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| CDS GCA 72 bp | ACAAGTAAGCAACCTCCCAACTCCTTGCTCATGCAGTaGTCTTGGCTCGGAATGCCCGTTCTTTTCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TSKQPPNSLLMQ*SWLGMPVLFSL Trigger: GAGGGAGAAAAGAACGGGCATTCCGAGCCAAGAGCACTGCATGAGCAAGGAGTTGGGAGGTTGCTTACTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000392109.5 ENST00000392111.7 ENST00000431802.5 ENST00000490188.1 ENST00000643945.1 |
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| CDS GCA 72 bp | CATCATAGGGATCAGCTCCAATACCATATCTCTCTCTaGTCCAGCACCTTCAATGGCTGGCTCCCAGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HHRDQLQYHISL*SSTFNGWLPAD Trigger: GTCTGCTGGGAGCCAGCCATTGAAGGTGCTGGAGCAGAGAGAGATATGGTATTGGAGCTGATCCCTATGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000423377.5 ENST00000428880.5 ENST00000431802.5 ENST00000439945.5 ENST00000490188.1 ENST00000643945.1 |
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| CDS TCA 72 bp | GGTACTTTACTGGGTTCTCCACAGCCAAGTCTCGACTaGGAAAAGCAGCATCCACATCCTCCAGGAGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: GTLLGSPQPSLD*EKQHPHPPGVP Trigger: TGGTACTCCTGGAGGATGTGGATGCTGCTTTTCTCAGTCGAGACTTGGCTGTGGAGAACCCAGTAAAGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000426649.5 ENST00000431802.5 ENST00000436603.1 ENST00000439945.5 ENST00000460579.5 ENST00000477422.5 |
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| CDS CCA 72 bp | CTGTCAGTGTACCACTTGGGGTTATCGATGAATTCCTaGACGTCTCTGACAATTCGGTCAGCCAGACCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSVYHLGLSMNS*TSLTIRSARPC Trigger: ACAGGGTCTGGCTGACCGAATTGTCAGAGACGTCCAGGAATTCATCGATAACCCCAAGTGGTACACTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000431802.5 ENST00000439945.5 ENST00000443791.5 ENST00000460579.5 ENST00000471576.5 ENST00000477422.5 |
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| CDS GCA 72 bp | GATTCCCAAGGAGTCCCCGTCTGCAAGTCTATCATCTaGATCTCTCGACTTCGTTCTACCCGAATCCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: DSQGVPVCKSII*ISRLRSTRIHF Trigger: GAAATGGATTCGGGTAGAACGAAGTCGAGAGATGCAGATGATAGACTTGCAGACGGGGACTCCTTGGGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000430322.5 ENST00000431802.5 ENST00000439945.5 ENST00000443791.5 ENST00000456050.5 ENST00000471576.5 ENST00000493376.1 ENST00000643945.1 |
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| CDS GCA 72 bp | GTTCAACAAGTAAGCAACCTCCCAACTCCTTGCTCATaGAGTGCTCTTGGCTCGGAATGCCCGTTCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VQQVSNLPTPCS*SALGSECPFFS Trigger: AGAAAAGAACGGGCATTCCGAGCCAAGAGCACTGCATGAGCAAGGAGTTGGGAGGTTGCTTACTTGTTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000392109.5 ENST00000392111.7 ENST00000431802.5 ENST00000490188.1 ENST00000643945.1 |
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| CDS CCA 72 bp | TTGAGCAGTCCACTGAAGGTGAGGCGACCTAGGCCTTaGTACTTTACTGGGTATAAAACTGCTCTTTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSPLKVRRPRP*YFTGYKTALSA Trigger: TGCGGAAAGAGCAGTTTTATACCCAGTAAAGTACCAAGGCCTAGGTCGCCTCACCTTCAGTGGACTGCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465706.1 |
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| CDS CAA 72 bp | CAAATATGTTCAACAAGTAAGCAACCTCCCAACTCCTaGCTCATGCAGTGCTCTTGGCTCGGAATGCCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: QICSTSKQPPNS*LMQCSWLGMPV Trigger: AACGGGCATTCCGAGCCAAGAGCACTGCATGAGCAAGGAGTTGGGAGGTTGCTTACTTGTTGAACATATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000392109.5 ENST00000392111.7 ENST00000431802.5 ENST00000490188.1 ENST00000643945.1 |
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| CDS CAA 90 bp | AATACGCAACAAATATGTTCAACAAGTAAGCAACCTCCCAACTCCTaGCTCATGCAGTGCTCTTGGCTCGGAATGCCCGTTCTTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NTQQICSTSKQPPNS*LMQCSWLGMPVLFS Trigger: GGAGAAAAGAACGGGCATTCCGAGCCAAGAGCACTGCATGAGCAAGGAGTTGGGAGGTTGCTTACTTGTTGAACATATTTGTTGCGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000392109.5 ENST00000392111.7 ENST00000431802.5 ENST00000490188.1 ENST00000643945.1 |
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| CDS TCA 72 bp | GTGTTACGAAAACCTGCTGCTCTCAGGACAAAATCATaGCGATGCTCCATCCCAAGCCTTCCAGGTTACAAA | + |
|
Preference number: 6 (lower is better) Translates to: VLRKPAALRTKS*RCSIPSLPGYK Trigger: TTTGTAACCTGGAAGGCTTGGGATGGAGCATCGTCATGATTTTGTCCTGAGAGCAGCAGGTTTTCGTAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430322.5 |
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| CDS TCA 72 bp | AAAGTAGGGATTGTCCTTCAGAGCCAGAATAAAGTCTaGAAGTGGCATCTTGAAAGGGAAACACCAAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: KVGIVLQSQNKV*KWHLERETPNL Trigger: AAGGTTTGGTGTTTCCCTTTCAAGATGCCACTTTCAGACTTTATTCTGGCTCTGAAGGACAATCCCTACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000359273.8 ENST00000392109.5 ENST00000392110.6 ENST00000392111.7 ENST00000412366.5 ENST00000423377.5 ENST00000428880.5 ENST00000430322.5 ENST00000431802.5 ENST00000439945.5 ENST00000456050.5 ENST00000493376.1 ENST00000643945.1 |
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| CDS GCA 72 bp | CCCTATCAGCCTAGTGTTTCCACAAAGGCTTCGTTTTaGCAAGTTGAGAGAAATTTTGAATACTCACATAAA | + |
|
Preference number: 6 (lower is better) Translates to: PYQPSVSTKASF*QVERNFEYSHK Trigger: TTTATGTGAGTATTCAAAATTTCTCTCAACTTGGCAAAACGAAGCCTTTGTGGAAACACTAGGCTGATAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460579.5 |
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