RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000197580

Ensembl transcript IDs: ENST00000357685.11, ENST00000361053.8, ENST00000438022.5, ENST00000460924.6, ENST00000461480.1, ENST00000494860.5, ENST00000525175.1, ENST00000526088.5, ENST00000527198.1, ENST00000527939.1, ENST00000530677.1, ENST00000531003.1, ENST00000531169.5, ENST00000532593.5, ENST00000532612.5, ENST00000532716.1, ENST00000534122.5, ENST00000534550.5

Found 527 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTTATAGGAGAAACCTGCAGCTTTACC +
Preference number: 1 (lower is better)
Translates to: YHLDSMDCLPKVHLL*RNPNNLIGETCSFT
Trigger: GGTAAAGCTGCAGGTTTCTCCTATAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534550.5
3UTR CCA 90 bp TATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTTATAGGAGAAACCATATGGCCCAAA +
Preference number: 1 (lower is better)
Translates to: YHLDSMDCLPKVHLL*RNPNNLIGETIWPK
Trigger: TTTGGGCCATATGGTTTCTCCTATAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
3UTR GCA 90 bp TGGTGTATTAAGGGTAAAACCGAAGCTTGTATGCACTCGAGCCTCTaGCATGGCGTGACTTGGCAGTGGCAAGGAAATAGTGAATTCTGT +
Preference number: 1 (lower is better)
Translates to: WCIKGKTEACMHSSL*HGVTWQWQGNSEFC
Trigger: ACAGAATTCACTATTTCCTTGCCACTGCCAAGTCACGCCATGGCAGAGGCTCGAGTGCATACAAGCTTCGGTTTTACCCTTAATACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
3UTR CCA 90 bp TTCCCTTTCTCTGTAGAAGCAATAGAACATATCACCTGGACTCCATaGATTGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACCCGAATA +
Preference number: 1 (lower is better)
Translates to: FPFSVEAIEHITWTP*IVSPRSTFSGGTRI
Trigger: TATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
3UTR TCA 90 bp AGGGTAAAACCGAAGCTTGTATGCACTCGAGCCTCTGCCATGGCGTaGCTTGGCAGTGGCAAGGAAATAGTGAATTCTGTTTTTAACAGA +
Preference number: 1 (lower is better)
Translates to: RVKPKLVCTRASAMA*LGSGKEIVNSVFNR
Trigger: TCTGTTAAAAACAGAATTCACTATTTCCTTGCCACTGCCAAGTCACGCCATGGCAGAGGCTCGAGTGCATACAAGCTTCGGTTTTACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357685.11
3UTR TCA 90 bp GGCTGGCATTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATATaGGAAAAATCATCACTGTATATGATGAAAAGCAGGACAAGTCAC +
Preference number: 1 (lower is better)
Translates to: GWHCSRYWRGQLHSI*EKSSLYMMKSRTSH
Trigger: GTGACTTGTCCTGCTTTTCATCATATACAGTGATGATTTTTCTCATATAGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAATGCCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR GCA 90 bp CTTATAGGAGAAACCATATGGCCCAAAGGAGTTCCCCATATTGTATaGTGTTCCATCCAGGTCATAATGAGGATGTGCAGTTGCTCCATT +
Preference number: 1 (lower is better)
Translates to: LIGETIWPKGVPHIV*CSIQVIMRMCSCSI
Trigger: AATGGAGCAACTGCACATCCTCATTATGACCTGGATGGAACAGCATACAATATGGGGAACTCCTTTGGGCCATATGGTTTCTCCTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
3UTR GCA 90 bp GTTCCCCATATTGTATGCTGTTCCATCCAGGTCATAATGAGGATGTaGAGTTGCTCCATTCACAGCAATAAATTTGCTCCAATCTACCTT +
Preference number: 1 (lower is better)
Translates to: VPHIVCCSIQVIMRM*SCSIHSNKFAPIYL
Trigger: AAGGTAGATTGGAGCAAATTTATTGCTGTGAATGGAGCAACTGCACATCCTCATTATGACCTGGATGGAACAGCATACAATATGGGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
3UTR GCA 90 bp CATATTGTATGCTGTTCCATCCAGGTCATAATGAGGATGTGCAGTTaGTCCATTCACAGCAATAAATTTGCTCCAATCTACCTTTTCTGT +
Preference number: 1 (lower is better)
Translates to: HIVCCSIQVIMRMCS*SIHSNKFAPIYLFC
Trigger: ACAGAAAAGGTAGATTGGAGCAAATTTATTGCTGTGAATGGAGCAACTGCACATCCTCATTATGACCTGGATGGAACAGCATACAATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
3UTR CCA 90 bp CATTCTTATCCACAAGCATGTATGGACCCATTTATTACTCTGGGTTaGCATAGTGTGAATACAGACACCCCTAAACACATATTAGCAATT +
Preference number: 1 (lower is better)
Translates to: HSYPQACMDPFITLG*HSVNTDTPKHILAI
Trigger: AATTGCTAATATGTGTTTAGGGGTGTCTGTATTCACACTATGCCAACCCAGAGTAATAAATGGGTCCATACATGCTTGTGGATAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR-3UTR GCA 90 bp GAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGACCGGGAGAGCCAGTGTaGCAAATTCTGAGATCACAA +
Preference number: 2 (lower is better)
Translates to: EHITWTPWIVSPRSTFSGPGEPV*QILRSQ
Trigger: TTGTGATCTCAGAATTTGGCACACTGGCTCTCCCGG...TCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
3UTR-3UTR GCA 90 bp ACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACCCGAATAACCATGAGGATGTGCAGTTaGTCCATTCACAGCAATAAA +
Preference number: 2 (lower is better)
Translates to: TPWIVSPRSTFSGGTRITMRMCS*SIHSNK
Trigger: TTTATTGCTGTGAATGGAGCAACTGCACATCCTCAT...GGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
3UTR-3UTR CCA 90 bp TGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACCCGAATAACCTTATAGGAGAAAAAAACATTCTTGCATaGATCCGGGAGAGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: CLPKVHLLWRNPNNLIGEKNILA*IRESQC
Trigger: ACACTGGCTCTCCCGGATCCATGCAAGAATGTTTTT...TTCTCCTATAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
3UTR-3UTR GCA 90 bp AGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTGTTCAAAAACATTCTTaGATGGATCCGGGAGAGCCA +
Preference number: 2 (lower is better)
Translates to: SNRTYHLDSMDCLPKVHLVQKHS*MDPGEP
Trigger: TGGCTCTCCCGGATCCATGCAAGAATGTTTTTGAAC...AAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
3UTR-3UTR GCA 90 bp GTCCACCTTCTCTGGAGGAACCCGAATAACCTTATAGGAGAAACCTGCAGCTTTGTTCAAAAACATTCTTaGATGGATCCGGGAGAGCCA +
Preference number: 2 (lower is better)
Translates to: VHLLWRNPNNLIGETCSFVQKHS*MDPGEP
Trigger: TGGCTCTCCCGGATCCATGCAAGAATGTTTTTGAAC...AAAGCTGCAGGTTTCTCCTATAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534550.5
3UTR-3UTR GCA 90 bp TTTCCACCACATGAAACCGCGTATTACACTGGGGTTCCCAGCTTATCCCATCTGGTTCCCCATATTGTATaGTGTTCCATCCAGGTCATA +
Preference number: 2 (lower is better)
Translates to: FPPHETAYYTGVPSLSHLVPHIV*CSIQVI
Trigger: TATGACCTGGATGGAACAGCATACAATATGGGGAAC...CAGATGGGATAAGCTGGGAACCCCAGTGTAATACGCGGTTTCATGTGGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527939.1
3UTR-3UTR CCA 90 bp AATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCAAAAACATTCTTGCATaGATCCGGGAGAGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: NRTYHLDSMDCLPKVHLLKNILA*IRESQC
Trigger: ACACTGGCTCTCCCGGATCCATGCAAGAATGTTTTT...GAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
3UTR-3UTR GCA 90 bp TTCTCTGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCACTTATAGGAGAAACCTaGAGCTTTACCAGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: FSVEAIEHITWTPWIVSPLIGET*SFTRQL
Trigger: GAGCTGCCTGGTAAAGCTGCAGGTTTCTCCTATAAG...TGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534550.5
3UTR-3UTR CCA 90 bp CCTTTCTCTGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTT +
Preference number: 2 (lower is better)
Translates to: PFSVEAIEHITWTPWIVSKVHLL*RNPNNL
Trigger: AAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTT...GGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
3UTR CAA 90 bp CTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTaGTGGTTGTCCCATCAGATGGGTATGAAGGTACCATGGAACCCA +
Preference number: 2 (lower is better)
Translates to: LYVQVHTYFKPSFQT*WLSHQMGMKVPWNP
Trigger: TGGGTTCCATGGTACCTTCATACCCATCTGATGGGACAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525175.1
3UTR-3UTR CCA 90 bp TATCCACAAGCATGTATGGACCCATTTATTACTCTGGGTTGGCATAGTGTGAATCATCTACTATGTGGCTaGCATTGTTCCAGGTACTGG +
Preference number: 2 (lower is better)
Translates to: YPQACMDPFITLGWHSVNHLLCG*HCSRYW
Trigger: CCAGTACCTGGAACAATGCCAGCCACATAGTAGATG...ATTCACACTATGCCAACCCAGAGTAATAAATGGGTCCATACATGCTTGTGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR-3UTR TCA 90 bp TTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATATGAGAAAAATCATCACTAGCAGGACAAGTCACTaGTTAATAACAGGCTTGGAA +
Preference number: 2 (lower is better)
Translates to: LFQVLERTAPLYMRKIITSRTSH*LITGLE
Trigger: TTCCAAGCCTGTTATTAATCAGTGACTTGTCCTGCT...AGTGATGATTTTTCTCATATAGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR-3UTR TCA 90 bp CCTTATAGGAGAAACCATATGGCCCAAAGGAGTTCCCCATATTGTATGCTGTTCCAGTGTGCCAAATTCTaGGATCACAATTCGGTTTTT +
Preference number: 2 (lower is better)
Translates to: PYRRNHMAQRSSPYCMLFQCAKF*DHNSVF
Trigger: AAAAACCGAATTGTGATCTCAGAATTTGGCACACTG...GAACAGCATACAATATGGGGAACTCCTTTGGGCCATATGGTTTCTCCTATAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
3UTR-3UTR CCA 90 bp ACATTGAGAGTGAAAGGATCTTGTTTCCTCACATCTACTCACAAGAGTAACCAATGGGCATCTACTATGTaGCTGGCATTGTTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: TLRVKGSCFLTSTHKSNQWASTM*LALFQV
Trigger: TACCTGGAACAATGCCAGCCACATAGTAGATGCCCA...TTGGTTACTCTTGTGAGTAGATGTGAGGAAACAAGATCCTTTCACTCTCAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR CAA 90 bp AGCAAGAATTTGAGAGCACAAATAGGACCACGTGACAACAGTCCTTaGGACTGTTGTGTAATGATCCTTACTAAGGGAAATTCTAAAGCC +
Preference number: 2 (lower is better)
Translates to: SKNLRAQIGPRDNSP*DCCVMILTKGNSKA
Trigger: GGCTTTAGAATTTCCCTTAGTAAGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTATTTGTGCTCTCAAATTCTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR-3UTR GCA 90 bp ATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGATCCTTACTAAGAATCATGTCACCTCTTaGTTCCATTCACTCTTTCAC +
Preference number: 2 (lower is better)
Translates to: IGPRDNSPLDCCVMILTKNHVTS*FHSLFH
Trigger: GTGAAAGAGTGAATGGAAGCAAGAGGTGACATGATT...CTTAGTAAGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR-3UTR TCA 90 bp AAGGATCTTGTTTCCTCACATCTACTCACAAGAGTAACCAAACTACACACAGTTCAGCTCCACTCTATATaGGAAAAATCATCACTGTAT +
Preference number: 2 (lower is better)
Translates to: KDLVSSHLLTRVTKLHTVQLHSI*EKSSLY
Trigger: ATACAGTGATGATTTTTCTCATATAGAGTGGAGCTG...AACTGTGTGTAGTTTGGTTACTCTTGTGAGTAGATGTGAGGAAACAAGATCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR-3UTR CAA 90 bp AACCGAAGCTTGTATGCACTCGAGCCTCTGCCATGGCGTGACTTGGCAGTGGCAATTTGGGACATTGGTTaGGGAGGTACGGTGCCCTTT +
Preference number: 3 (lower is better)
Translates to: NRSLYALEPLPWRDLAVAIWDIG*GGTVPF
Trigger: AAAGGGCACCGTACCTCCCAAACCAATGTCCCAAAT...TGCCACTGCCAAGTCACGCCATGGCAGAGGCTCGAGTGCATACAAGCTTCGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357685.11
3UTR-3UTR CAA 90 bp TATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACAAGGAGTTCCCCATATaGTATGCTGTTCCATCCAGG +
Preference number: 3 (lower is better)
Translates to: YHLDSMDCLPKVHLLWRNKEFPI*YAVPSR
Trigger: CCTGGATGGAACAGCATACAATATGGGGAACTCCTT...GTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527939.1
3UTR TCA 72 bp CCGAAGCTTGTATGCACTCGAGCCTCTGCCATGGCGTaGCTTGGCAGTGGCAAGGAAATAGTGAATTCTGTT +
Preference number: 3 (lower is better)
Translates to: PKLVCTRASAMA*LGSGKEIVNSV
Trigger: AACAGAATTCACTATTTCCTTGCCACTGCCAAGTCACGCCATGGCAGAGGCTCGAGTGCATACAAGCTTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357685.11
3UTR GCA 72 bp AAGGGTAAAACCGAAGCTTGTATGCACTCGAGCCTCTaGCATGGCGTGACTTGGCAGTGGCAAGGAAATAGT +
Preference number: 3 (lower is better)
Translates to: KGKTEACMHSSL*HGVTWQWQGNS
Trigger: ACTATTTCCTTGCCACTGCCAAGTCACGCCATGGCAGAGGCTCGAGTGCATACAAGCTTCGGTTTTACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
3UTR TCA 72 bp GTTTCCAGACCTTGTGGTTGTCCCATCAGATGGGTATaGAGGTACCATGGAACCCATAAGGCATCTGCACAG +
Preference number: 3 (lower is better)
Translates to: VSRPCGCPIRWV*RYHGTHKASAQ
Trigger: CTGTGCAGATGCCTTATGGGTTCCATGGTACCTTCATACCCATCTGATGGGACAACCACAAGGTCTGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525175.1
3UTR CCA 72 bp GACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTTATAGGAGAAACCATA +
Preference number: 3 (lower is better)
Translates to: DSMDCLPKVHLL*RNPNNLIGETI
Trigger: TATGGTTTCTCCTATAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
3UTR CCA 72 bp TCTGTAGAAGCAATAGAACATATCACCTGGACTCCATaGATTGTCTCCCCAAGGTCCACCTTCTCTGGAGGA +
Preference number: 3 (lower is better)
Translates to: SVEAIEHITWTP*IVSPRSTFSGG
Trigger: TCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
3UTR-3UTR CAA 90 bp CCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACCCGAATAACCTTACGGTTTTTAGCACTGTaGGCCTTATATGTATCACTC +
Preference number: 3 (lower is better)
Translates to: PWIVSPRSTFSGGTRITLRFLAL*ALYVSL
Trigger: GAGTGATACATATAAGGCCAACAGTGCTAAAAACCG...TAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
3UTR-3UTR CAA 90 bp TTCTCTGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCACGTTCAAAAACATTCTaGCATGGATCCGGGAGAGCC +
Preference number: 3 (lower is better)
Translates to: FSVEAIEHITWTPWIVSPRSKTF*HGSGRA
Trigger: GGCTCTCCCGGATCCATGCAAGAATGTTTTTGAACG...TGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
3UTR CCA 72 bp TTCCCTTTCTCTGTAGAAGCAATAGAACATATCACCTaGACTCCATGGATTGTCTCCCCAAGGTCCACCTTC +
Preference number: 3 (lower is better)
Translates to: FPFSVEAIEHIT*TPWIVSPRSTF
Trigger: GAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAAAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
3UTR-3UTR CAA 90 bp AAGGATCTTGTTTCCTCACATCTACTCACAAGAGTAACCAAACTACACACAGTTACTATGTGGCTGGCATaGTTCCAGGTACTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: KDLVSSHLLTRVTKLHTVTMWLA*FQVLER
Trigger: CCTCTCCAGTACCTGGAACAATGCCAGCCACATAGT...AACTGTGTGTAGTTTGGTTACTCTTGTGAGTAGATGTGAGGAAACAAGATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR CCA 72 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTaGACTTCTAACGAACCCATCACCCAAATAGGGAAC +
Preference number: 3 (lower is better)
Translates to: ACYMSILCAAEV*TSNEPITQIGN
Trigger: GTTCCCTATTTGGGTGATGGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
3UTR CCA 72 bp GTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTaGTTGTCCCATCAGATGGGTATGAAGGTACCATGG +
Preference number: 3 (lower is better)
Translates to: VHTYFKPSFQTL*LSHQMGMKVPW
Trigger: CCATGGTACCTTCATACCCATCTGATGGGACAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525175.1
3UTR-3UTR CAA 90 bp TTGAGAGCACAAATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGGAGAGTGAAAGGATCTaGTTTCCTCACATCTACTCA +
Preference number: 3 (lower is better)
Translates to: LRAQIGPRDNSPLDCCVMESERI*FPHIYS
Trigger: TGAGTAGATGTGAGGAAACAAGATCCTTTCACTCTC...CATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTATTTGTGCTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR GCA 72 bp TGCTGTTCCATCCAGGTCATAATGAGGATGTGCAGTTaGTCCATTCACAGCAATAAATTTGCTCCAATCTAC +
Preference number: 3 (lower is better)
Translates to: CCSIQVIMRMCS*SIHSNKFAPIY
Trigger: GTAGATTGGAGCAAATTTATTGCTGTGAATGGAGCAACTGCACATCCTCATTATGACCTGGATGGAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527939.1
3UTR CCA 72 bp CCACAAGCATGTATGGACCCATTTATTACTCTGGGTTaGCATAGTGTGAATACAGACACCCCTAAACACATA +
Preference number: 3 (lower is better)
Translates to: PQACMDPFITLG*HSVNTDTPKHI
Trigger: TATGTGTTTAGGGGTGTCTGTATTCACACTATGCCAACCCAGAGTAATAAATGGGTCCATACATGCTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR TCA 72 bp TGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATATaGGAAAAATCATCACTGTATATGATGAAAAGCAGG +
Preference number: 3 (lower is better)
Translates to: CSRYWRGQLHSI*EKSSLYMMKSR
Trigger: CCTGCTTTTCATCATATACAGTGATGATTTTTCTCATATAGAGTGGAGCTGTCCTCTCCAGTACCTGGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR TCA 72 bp AAAGAGCAAGAATTTGAGAGCACAAATAGGACCACGTaGCAACAGTCCTTTGGACTGTTGTGTAATGATCCT +
Preference number: 3 (lower is better)
Translates to: KEQEFESTNRTT*QQSFGLLCNDP
Trigger: AGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTATTTGTGCTCTCAAATTCTTGCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR GCA 72 bp ATTGTATGCTGTTCCATCCAGGTCATAATGAGGATGTaGAGTTGCTCCATTCACAGCAATAAATTTGCTCCA +
Preference number: 3 (lower is better)
Translates to: IVCCSIQVIMRM*SCSIHSNKFAP
Trigger: TGGAGCAAATTTATTGCTGTGAATGGAGCAACTGCACATCCTCATTATGACCTGGATGGAACAGCATACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527939.1
3UTR CCA 72 bp TGTGGTGTTATTTCTGAGGCCTCTGTTGTGTTCCATTaGTGTATATATCTGTTTTGGTACCCATACCATGCT +
Preference number: 3 (lower is better)
Translates to: CGVISEASVVFH*CIYLFWYPYHA
Trigger: AGCATGGTATGGGTACCAAAACAGATATATACACCAATGGAACACAACAGAGGCCTCAGAAATAACACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp GGCATCTGCACAGGTACCTCTGCTCGGCCCAGCTCTTCAAAGTTCTTGGCATCCCTGCACAGGTACCTCTaGTCGGCCCAGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: GICTGTSARPSSSKFLASLHRYL*SAQLFK
Trigger: TTTGAAGAGCTGGGCCGAGCAGAGGTACCTGTGCAG...GGATGCCAAGAACTTTGAAGAGCTGGGCCGAGCAGAGGTACCTGTGCAGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525175.1
CDS-3UTR TCA 90 bp AGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGGCCATTCTGAACTGGTaGAGCAGCGCCATCCCATCA +
Preference number: 4 (lower is better)
Translates to: RTYHLDSMDCLPKVHLLWAILNW*SSAIPS
Trigger: TGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGC...CCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR CCA 90 bp GAACTGGTGAAGCAGCGCCATCCCATCAAACCAATGATTGTACCTCACAGAGGAGAGCCTCTTCCACTGTaGTCAGCAGCGGTGCAACAC +
Preference number: 4 (lower is better)
Translates to: ELVKQRHPIKPMIVPHRGEPLPL*SAAVQH
Trigger: GTGTTGCACCGCTGCTGACCACAGTGGAAGAGGCTC...TCCTCTGTGAGGTACAATCATTGGTTTGATGGGATGGCGCTGCTTCACCAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531003.1
CDS-3UTR CCA 90 bp AACCGAAGCTTGTATGCACTCGAGCCTCTGCCATGGCGTGACTTGGCAGTGGCAAGTTTCCAGACCTTGTaGTTGTCCCATCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: NRSLYALEPLPWRDLAVASFQTL*LSHQMG
Trigger: ACCCATCTGATGGGACAACCACAAGGTCTGGAAACT...TGCCACTGCCAAGTCACGCCATGGCAGAGGCTCGAGTGCATACAAGCTTCGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR TCA 90 bp CATCTACTATGTGGCTGGCATTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTCGAAGTCAGGTAGCGTaGTGCCTCCAGCTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: HLLCGWHCSRYWRGQLHSRSQVA*CLQLCS
Trigger: AGAACAAAGCTGGAGGCATCACGCTACCTGACTTCG...AGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAATGCCAGCCACATAGTAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp GAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGAACCAATGATTGTACCTaGGAGCCGGTGCACCATCAC +
Preference number: 4 (lower is better)
Translates to: EHITWTPWIVSPRSTFSGTNDCT*EPVHHH
Trigger: GTGATGGTGCACCGGCTCCCAGGTACAATCATTGGT...TCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR TCA 90 bp AGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTGCCATTCTGAACTGGTaGAGCAGCGCCATCCCATCA +
Preference number: 4 (lower is better)
Translates to: SNRTYHLDSMDCLPKVHLAILNW*SSAIPS
Trigger: TGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGC...AAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR TCA 90 bp TATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACCGTTTTTCCACCACATaGAACCGCGTATTACACTGG +
Preference number: 4 (lower is better)
Translates to: YHLDSMDCLPKVHLLWRNRFSTT*NRVLHW
Trigger: CCAGTGTAATACGCGGTTTCATGTGGTGGAAAAACG...GTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR TCA 90 bp GATGGGTATGAAGGTACCATGGAACCCATAAGGCATCTGCACAGGTACCTCTGCCCCATCAGATGGGTATaGAGGTACCATGGAACCCAT +
Preference number: 4 (lower is better)
Translates to: DGYEGTMEPIRHLHRYLCPIRWV*RYHGTH
Trigger: ATGGGTTCCATGGTACCTTCATACCCATCTGATGGG...GCAGAGGTACCTGTGCAGATGCCTTATGGGTTCCATGGTACCTTCATACCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525175.1
CDS-3UTR TCA 90 bp TCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACCCGAATAACCTTATCCCATCAAACCAATaGTTGTACCTGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: SMDCLPKVHLLWRNPNNLIPSNQ*LYLGAG
Trigger: ACCGGCTCCCAGGTACAATCATTGGTTTGATGGGAT...AAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR GCA 90 bp CCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACCCGAATAACCTTACCGGGAGAGCCAGTGTaGCAAATTCTGAGATCACAA +
Preference number: 4 (lower is better)
Translates to: PWIVSPRSTFSGGTRITLPGEPV*QILRSQ
Trigger: TTGTGATCTCAGAATTTGGCACACTGGCTCTCCCGG...TAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR CCA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACAGCAGAGATGCCCCGTaGAGCCTCTTCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHSRDAP*SLFHCG
Trigger: ACCACAGTGGAAGAGGCTCCACGGGGCATCTCTGCT...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp TGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACCCGAATAACCTTATAGGAGAAATCACCTGGACTCCATaGATTGTCTCCCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: CLPKVHLLWRNPNNLIGEITWTP*IVSPRS
Trigger: GGACCTTGGGGAGACAATCCATGGAGTCCAGGTGAT...TTCTCCTATAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR CCA 90 bp CCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACCCGAATAACCTTAAACCGCGTATTACACTaGGGTTCCCAGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: PWIVSPRSTFSGGTRITLNRVLH*GSQLIP
Trigger: TGGGATAAGCTGGGAACCCCAGTGTAATACGCGGTT...TAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR TCA 90 bp TGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCTGCCCTTTGCCATTCTaGACTGGTGAAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: CRSNRTYHLDSMDCLPKVCPLPF*TGEAAP
Trigger: TGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGGCA...GACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR TCA 90 bp CATCTACTATGTGGCTGGCATTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTACAAATAGGACCACGTaGCAACAGTCCTTTGGACTG +
Preference number: 4 (lower is better)
Translates to: HLLCGWHCSRYWRGQLHSTNRTT*QQSFGL
Trigger: CAGTCCAAAGGACTGTTGTCACGTGGTCCTATTTGT...AGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAATGCCAGCCACATAGTAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp GAACTGGTGAAGCAGCGCCATCCCATCAAACCAATGATTGTACCTCACAGAGGAGTACCTTTTGAAAACTaGGAGCCGGTGCACCATCAC +
Preference number: 4 (lower is better)
Translates to: ELVKQRHPIKPMIVPHRGVPFEN*EPVHHH
Trigger: GTGATGGTGCACCGGCTCCCAGTTTTCAAAAGGTAC...TCCTCTGTGAGGTACAATCATTGGTTTGATGGGATGGCGCTGCTTCACCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531003.1
CDS-3UTR CCA 90 bp CTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTCAGCGGTGCAACACATaGCAGACCCCGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: LLESSVFISPVFMSKCTLQRCNT*QTPTLP
Trigger: GGGCAGTGTCGGGGTCTGCCATGTGTTGCACCGCTG...AAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp CCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACAGAGCCTCTTCCACTGTaGTCAGCAGCGGTGCAACAC +
Preference number: 4 (lower is better)
Translates to: PLLESSVFISPVFMSKCTEPLPL*SAAVQH
Trigger: GTGTTGCACCGCTGCTGACCACAGTGGAAGAGGCTC...TGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp GTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCATCACCTGGACTCCATaGATTGTCTCCCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VEAIEHITWTPWIVSPRSITWTP*IVSPRS
Trigger: GGACCTTGGGGAGACAATCCATGGAGTCCAGGTGAT...GGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR TCA 90 bp AAGAGCAAGAATTTGAGAGCACAAATAGGACCACGTGACAACAGTCCTTTGGACGCCATTCTGAACTGGTaGAGCAGCGCCATCCCATCA +
Preference number: 4 (lower is better)
Translates to: KSKNLRAQIGPRDNSPLDAILNW*SSAIPS
Trigger: TGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGC...GTCCAAAGGACTGTTGTCACGTGGTCCTATTTGTGCTCTCAAATTCTTGCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCTGCCCTTTGCCATTCTaGACTGGTGAAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPCPLPF*TGEAAP
Trigger: TGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGGCA...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR TCA 90 bp TTGAGAGCACAAATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGTGCCCTTTGCCATTCTaGACTGGTGAAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: LRAQIGPRDNSPLDCCVMCPLPF*TGEAAP
Trigger: TGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGGCA...CATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTATTTGTGCTCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp AACCGAAGCTTGTATGCACTCGAGCCTCTGCCATGGCGTGACTTGGCAGTGGCAGATACTTTTTGCCACTaGATCGATCATAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: NRSLYALEPLPWRDLAVADTFCH*IDHSRS
Trigger: AGATCTACTATGATCGATTCAGTGGCAAAAAGTATC...TGCCACTGCCAAGTCACGCCATGGCAGAGGCTCGAGTGCATACAAGCTTCGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR GCA 90 bp ACTGGTGAAGCAGCGCCATCCCATCAAACCAATGATTGTACCTCACAGAGGAAGAGGAAGGAAATCCACTaGAGTGGCAGAATGACTCCT +
Preference number: 4 (lower is better)
Translates to: TGEAAPSHQTNDCTSQRKRKEIH*SGRMTP
Trigger: AGGAGTCATTCTGCCACTGCAGTGGATTTCCTTCCT...CTTCCTCTGTGAGGTACAATCATTGGTTTGATGGGATGGCGCTGCTTCACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531003.1
CDS-3UTR GCA 90 bp TATCCACAAGCATGTATGGACCCATTTATTACTCTGGGTTGGCATAGTGTGAATTGTGGTCAGCAGCGGTaGAACACATGGCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: YPQACMDPFITLGWHSVNCGQQR*NTWQTP
Trigger: CGGGGTCTGCCATGTGTTGCACCGCTGCTGACCACA...ATTCACACTATGCCAACCCAGAGTAATAAATGGGTCCATACATGCTTGTGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp TGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACCCGAATAACCTTATAGGAGAATGTCACTGTGCCCTTTaGCATTCTGAACTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CLPKVHLLWRNPNNLIGECHCAL*HSELVK
Trigger: CTTCACCAGTTCAGAATGGCAAAGGGCACAGTGACA...TTCTCCTATAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR GCA 90 bp AGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGCACTCTGTAGAAACTTaGTCCTGTATGTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: RTYHLDSMDCLPKVHLLWHSVET*SCMSLC
Trigger: GCACAGTGACATACAGGAGCAAGTTTCTACAGAGTG...CCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR GCA 90 bp AGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCCGGGAGAGCCAGTGTaGCAAATTCTGAGATCACAA +
Preference number: 4 (lower is better)
Translates to: SNRTYHLDSMDCLPKVHLPGEPV*QILRSQ
Trigger: TTGTGATCTCAGAATTTGGCACACTGGCTCTCCCGG...AAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR GCA 90 bp TACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATCACCCTGCACAGGTACCTCTaGTCGGCCCAGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: YMSILCAAEVWTSNEPITLHRYL*SAQLFK
Trigger: TTTGAAGAGCTGGGCCGAGCAGAGGTACCTGTGCAG...GGTGATGGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
CDS-3UTR GCA 90 bp CAGGCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAAATGCACTCGAGCCTCTaGCATGGCGTGACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QACYMSILCAAEVWTSNEMHSSL*HGVTWQ
Trigger: CTGCCAAGTCACGCCATGGCAGAGGCTCGAGTGCAT...TTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR GCA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACCTCATTGCAGTTGGGTaGAGGCAGACAAAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHLIAVG*RQTKVG
Trigger: GCCCACTTTTGTCTGCCTGCACCCAACTGCAATGAG...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCCAGCGGTGCAACACATaGCAGACCCCGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTQRCNT*QTPTLP
Trigger: GGGCAGTGTCGGGGTCTGCCATGTGTTGCACCGCTG...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTGAGCCTCTTCCACTGTaGTCAGCAGCGGTGCAACAC +
Preference number: 4 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTEPLPL*SAAVQH
Trigger: GTGTTGCACCGCTGCTGACCACAGTGGAAGAGGCTC...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTAGCAGAGATGCCCCGTaGAGCCTCTTCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTSRDAP*SLFHCG
Trigger: ACCACAGTGGAAGAGGCTCCACGGGGCATCTCTGCT...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp TTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATATGAGAAAAATCATCACTAGCAGAGATGCCCCGTaGAGCCTCTTCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: LFQVLERTAPLYMRKIITSRDAP*SLFHCG
Trigger: ACCACAGTGGAAGAGGCTCCACGGGGCATCTCTGCT...AGTGATGATTTTTCTCATATAGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp GAACCCATAAGGCATCTGCACAGGTACCTCTGCTCGGCCCAGCTCTTCAAAGTTTTCTTCATTGGTTCCTaGTGCTGGAACAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: EPIRHLHRYLCSAQLFKVFFIGS*CWNKNR
Trigger: CCTGTTTTTGTTCCAGCACCAGGAACCAATGAAGAA...AACTTTGAAGAGCTGGGCCGAGCAGAGGTACCTGTGCAGATGCCTTATGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525175.1
CDS-3UTR TCA 90 bp TATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACTCACACTGGCAGTTTTaGGTACTACTAAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: YHLDSMDCLPKVHLLWRNSHWQF*VLLNSE
Trigger: TTCACTGTTTAGTAGTACTCAAAACTGCCAGTGTGA...GTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534550.5
CDS-3UTR TCA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTGCCATTCTGAACTGGTaGAGCAGCGCCATCCCATCA +
Preference number: 4 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTAILNW*SSAIPS
Trigger: TGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGC...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACCCAGCTTATCCCATCTaGAAAGGCCTTTCCCCGAAT +
Preference number: 4 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHPAYPI*KGLSPN
Trigger: ATTCGGGGAAAGGCCTTTTCAGATGGGATAAGCTGG...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTGCTGAATTATGGACCTaGTCAAGCCCTTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTAELWT*SSPSPA
Trigger: GGCTGGGGAAGGGCTTGATCAGGTCCATAATTCAGC...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTGCCTCTGCCATGGCGTaGCTTGGCAGTGGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFASAMA*LGSGKE
Trigger: TTCCTTGCCACTGCCAAGTCACGCCATGGCAGAGGC...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR TCA 90 bp CTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTCTAGGCCATGATGAGTaGGGGCAGTCTTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: LLESSVFISPVFMSKCTLLGHDE*GQSSAP
Trigger: AGGTGCGGAAGACTGCCCTCACTCATCATGGCCTAG...AAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR TCA 90 bp CATCTACTATGTGGCTGGCATTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTAGCAGGACAAGTCACTaGTTAATAACAGGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: HLLCGWHCSRYWRGQLHSSRTSH*LITGLE
Trigger: TTCCAAGCCTGTTATTAATCAGTGACTTGTCCTGCT...AGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAATGCCAGCCACATAGTAGATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp GTCCACCTTCTCTGGAGGAACCCGAATAACCTTATAGGAGAAACCTGCAGCTTTAGGAAGGAAATCCACTaGAGTGGCAGAATGACTCCT +
Preference number: 4 (lower is better)
Translates to: VHLLWRNPNNLIGETCSFRKEIH*SGRMTP
Trigger: AGGAGTCATTCTGCCACTGCAGTGGATTTCCTTCCT...AAAGCTGCAGGTTTCTCCTATAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534550.5
CDS-3UTR GCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTGTGGTCAGCAGCGGTaGAACACATGGCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTCGQQR*NTWQTP
Trigger: CGGGGTCTGCCATGTGTTGCACCGCTGCTGACCACA...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR GCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTGTGGTCAGCAGCGGTaGAACACATGGCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFCGQQR*NTWQTP
Trigger: CGGGGTCTGCCATGTGTTGCACCGCTGCTGACCACA...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR GCA 90 bp GTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGTGGTCAGCAGCGGTaGAACACATGGCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: VFMSKCTLILNLVSRPCGCGQQR*NTWQTP
Trigger: CGGGGTCTGCCATGTGTTGCACCGCTGCTGACCACA...ACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR GCA 90 bp CAAACCAATGATTGTACCTCACAGAGGAAGCAGATATTAATGCATATTCCACAGTGTGGTCAGCAGCGGTaGAACACATGGCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: QTNDCTSQRKQILMHIPQCGQQR*NTWQTP
Trigger: CGGGGTCTGCCATGTGTTGCACCGCTGCTGACCACA...CTGTGGAATATGCATTAATATCTGCTTCCTCTGTGAGGTACAATCATTGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531003.1
CDS-3UTR GCA 90 bp AGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTTGTCACTGTGCCCTTTaGCATTCTGAACTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SNRTYHLDSMDCLPKVHLCHCAL*HSELVK
Trigger: CTTCACCAGTTCAGAATGGCAAAGGGCACAGTGACA...AAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR GCA 90 bp CAGGCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACTGCACAGGTACCTCTaGTCGGCCCAGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: QACYMSILCAAEVWTSNELHRYL*SAQLFK
Trigger: TTTGAAGAGCTGGGCCGAGCAGAGGTACCTGTGCAG...TTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
CDS-3UTR GCA 90 bp ATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGATCCTTACTAAGCTGCACAGGTACCTCTaGTCGGCCCAGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: IGPRDNSPLDCCVMILTKLHRYL*SAQLFK
Trigger: TTTGAAGAGCTGGGCCGAGCAGAGGTACCTGTGCAG...CTTAGTAAGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp GAACTGGTGAAGCAGCGCCATCCCATCAAACCAATGATTGTACCTCACAGAGGACACAGAACCAGCCCATaGCAAGAAATCCAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: ELVKQRHPIKPMIVPHRGHRTSP*QEIQVV
Trigger: AACAACTTGGATTTCTTGGCATGGGCTGGTTCTGTG...TCCTCTGTGAGGTACAATCATTGGTTTGATGGGATGGCGCTGCTTCACCAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531003.1
CDS-3UTR CCA 90 bp ATTGGTCATGATGGTGTATTAAGGGTAAAACCGAAGCTTGTATGCACTCGAGCCATCACCTGGACTCCATaGATTGTCTCCCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: IGHDGVLRVKPKLVCTRAITWTP*IVSPRS
Trigger: GGACCTTGGGGAGACAATCCATGGAGTCCAGGTGAT...GGCTCGAGTGCATACAAGCTTCGGTTTTACCCTTAATACACCATCATGACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CCA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACAACCGCGTATTACACTaGGGTTCCCAGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHNRVLH*GSQLIP
Trigger: TGGGATAAGCTGGGAACCCCAGTGTAATACGCGGTT...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTGCTGTAGTATCTCCCTaGAAGGAGCTGTCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTAVVSP*KELSSA
Trigger: CGCACTGGACAGCTCCTTCCAGGGAGATACTACAGC...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTCTCGAGCCTCTGCCATaGCGTGACTTGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LESSVFISPVFMSKCTLILEPLP*RDLAVA
Trigger: TGCCACTGCCAAGTCACGCCATGGCAGAGGCTCGAG...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CCA 90 bp TTCTCTGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCAACCAATGATTGTACCTaGGAGCCGGTGCACCATCAC +
Preference number: 4 (lower is better)
Translates to: FSVEAIEHITWTPWIVSPTNDCT*EPVHHH
Trigger: GTGATGGTGCACCGGCTCCCAGGTACAATCATTGGT...TGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR TCA 90 bp GAGGTAGTAATCACCCTTGTACCGCACATAGTTGACATTAGTATTGTCAGTCATTGCCCTTTGCCATTCTaGACTGGTGAAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: EVVITLVPHIVDISIVSHCPLPF*TGEAAP
Trigger: TGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGGCA...ATGACTGACAATACTAATGTCAACTATGTGCGGTACAAGGGTGATTACTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR TCA 90 bp GAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTGGACAGTGTGCCAAATTCTaGGATCACAATTCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: EHITWTPWIVSPRSTFSGQCAKF*DHNSVF
Trigger: AAAAACCGAATTGTGATCTCAGAATTTGGCACACTG...TCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR TCA 90 bp CCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACCAGCTTATCCCATCTaGAAAGGCCTTTCCCCGAAT +
Preference number: 4 (lower is better)
Translates to: PLLESSVFISPVFMSKCTPAYPI*KGLSPN
Trigger: ATTCGGGGAAAGGCCTTTTCAGATGGGATAAGCTGG...TGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATCACCCCCATCAGATGGGTATaGAGGTACCATGGAACCCAT +
Preference number: 4 (lower is better)
Translates to: YMSILCAAEVWTSNEPITPIRWV*RYHGTH
Trigger: ATGGGTTCCATGGTACCTTCATACCCATCTGATGGG...GGTGATGGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
CDS-3UTR TCA 90 bp CCTTATAGGAGAAACCATATGGCCCAAAGGAGTTCCCCATATTGTATGCTGTTCATCCCATCAAACCAATaGTTGTACCTGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: PYRRNHMAQRSSPYCMLFIPSNQ*LYLGAG
Trigger: ACCGGCTCCCAGGTACAATCATTGGTTTGATGGGAT...GAACAGCATACAATATGGGGAACTCCTTTGGGCCATATGGTTTCTCCTATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR GCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATAGACTCGAGCAGAGATaGCCCGTGGAGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYRLEQR*PVEPLP
Trigger: TGGAAGAGGCTCCACGGGGCATCTCTGCTCGAGTCT...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR GCA 90 bp ATTAGCAATTCTTCTGCCAGTGTAGACACATTGAGAGTGAAAGGATCTTGTTTCAGACTCGAGCAGAGATaGCCCGTGGAGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ISNSSASVDTLRVKGSCFRLEQR*PVEPLP
Trigger: TGGAAGAGGCTCCACGGGGCATCTCTGCTCGAGTCT...GAAACAAGATCCTTTCACTCTCAATGTGTCTACACTGGCAGAAGAATTGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACTGTCACTGTGCCCTTTaGCATTCTGAACTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHCHCAL*HSELVK
Trigger: CTTCACCAGTTCAGAATGGCAAAGGGCACAGTGACA...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCCCGGGAGAGCCAGTGTaGCAAATTCTGAGATCACAA +
Preference number: 4 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPPGEPV*QILRSQ
Trigger: TTGTGATCTCAGAATTTGGCACACTGGCTCTCCCGG...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR GCA 90 bp CCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACCGGGAGAGCCAGTGTaGCAAATTCTGAGATCACAA +
Preference number: 4 (lower is better)
Translates to: PLLESSVFISPVFMSKCTPGEPV*QILRSQ
Trigger: TTGTGATCTCAGAATTTGGCACACTGGCTCTCCCGG...TGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TACTATGTGGCTGGCATTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATATGTTCAAAAACATTCTTaGATGGATCCGGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: YYVAGIVPGTGEDSSTLYVQKHS*MDPGEP
Trigger: TGGCTCTCCCGGATCCATGCAAGAATGTTTTTGAAC...ATATAGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAATGCCAGCCACATAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp CATCTACTATGTGGCTGGCATTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATGAGGATGTGCAGTTaGTCCATTCACAGCAATAAA +
Preference number: 4 (lower is better)
Translates to: HLLCGWHCSRYWRGQLHSMRMCS*SIHSNK
Trigger: TTTATTGCTGTGAATGGAGCAACTGCACATCCTCAT...AGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAATGCCAGCCACATAGTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp CTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTCTGCACAGGTACCTCTaGTCGGCCCAGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: LLESSVFISPVFMSKCTLLHRYL*SAQLFK
Trigger: TTTGAAGAGCTGGGCCGAGCAGAGGTACCTGTGCAG...AAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTGAGCCTCTTCCACTGTaGTCAGCAGCGGTGCAACAC +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFEPLPL*SAAVQH
Trigger: GTGTTGCACCGCTGCTGACCACAGTGGAAGAGGCTC...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATGAGCCTCTTCCACTGTaGTCAGCAGCGGTGCAACAC +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYEPLPL*SAAVQH
Trigger: GTGTTGCACCGCTGCTGACCACAGTGGAAGAGGCTC...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp ACATTGAGAGTGAAAGGATCTTGTTTCCTCACATCTACTCACAAGAGTAACCAAGAGCCTCTTCCACTGTaGTCAGCAGCGGTGCAACAC +
Preference number: 4 (lower is better)
Translates to: TLRVKGSCFLTSTHKSNQEPLPL*SAAVQH
Trigger: GTGTTGCACCGCTGCTGACCACAGTGGAAGAGGCTC...TTGGTTACTCTTGTGAGTAGATGTGAGGAAACAAGATCCTTTCACTCTCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTAGCAGAGATGCCCCGTaGAGCCTCTTCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFSRDAP*SLFHCG
Trigger: ACCACAGTGGAAGAGGCTCCACGGGGCATCTCTGCT...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAGCAGAGATGCCCCGTaGAGCCTCTTCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFSRDAP*SLFHCG
Trigger: ACCACAGTGGAAGAGGCTCCACGGGGCATCTCTGCT...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp CCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACAAACCGCGTATTACACTaGGGTTCCCAGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: PLLESSVFISPVFMSKCTNRVLH*GSQLIP
Trigger: TGGGATAAGCTGGGAACCCCAGTGTAATACGCGGTT...TGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCTGCCATGGCGTGACTTaGCAGTGGCAAGGAAATAGT +
Preference number: 4 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPCHGVT*QWQGNS
Trigger: ACTATTTCCTTGCCACTGCCAAGTCACGCCATGGCA...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CCA 90 bp CCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTGAGTACAGGGTCTaGTGTTTGTCTCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PLLESSVFISPVFMSKCTLEYRV*CLSPLS
Trigger: GGAGAGAGGAGACAAACACCAGACCCTGTACTCAAG...TGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438022.5
3UTR CAA 72 bp TCTGGGGTACATGTGCAGGCTTGTTACATGAGTATATaGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCC +
Preference number: 4 (lower is better)
Translates to: SGVHVQACYMSI*CAAEVWTSNEP
Trigger: GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGCCTGCACATGTACCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
CDS-3UTR TCA 90 bp TTGTACCTCACAGAGGAAGCAGATATTAATGCATATTCCACAGAACCAGCCCATTTCCCATGTACCTTTTaGAAACTGGGAGCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: LYLTEEADINAYSTEPAHFPCTF*KLGAGA
Trigger: TGCACCGGCTCCCAGTTTTCAAAAGGTACATGGGAA...ATGGGCTGGTTCTGTGGAATATGCATTAATATCTGCTTCCTCTGTGAGGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531003.1
CDS-3UTR TCA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTGCCATTCTGAACTGGTaGAGCAGCGCCATCCCATCA +
Preference number: 4 (lower is better)
Translates to: LESSVFISPVFMSKCTLIAILNW*SSAIPS
Trigger: TGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGC...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCGCCATTCTGAACTGGTaGAGCAGCGCCATCCCATCA +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTAILNW*SSAIPS
Trigger: TGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGC...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTGCCCTTTGCCATTCTaGACTGGTGAAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTCPLPF*TGEAAP
Trigger: TGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGGCA...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTGCCCTTTGCCATTCTaGACTGGTGAAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFCPLPF*TGEAAP
Trigger: TGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGGCA...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTGCCCTTTGCCATTCTaGACTGGTGAAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWCPLPF*TGEAAP
Trigger: TGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGGCA...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTCCAGCTTATCCCATCTaGAAAGGCCTTTCCCCGAAT +
Preference number: 4 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTPAYPI*KGLSPN
Trigger: ATTCGGGGAAAGGCCTTTTCAGATGGGATAAGCTGG...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp CTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGGCTGAATTATGGACCTaGTCAAGCCCTTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LYVQVHTYFKPSFQTLWLAELWT*SSPSPA
Trigger: GGCTGGGGAAGGGCTTGATCAGGTCCATAATTCAGC...CAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTGCTGAATTATGGACCTaGTCAAGCCCTTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPAELWT*SSPSPA
Trigger: GGCTGGGGAAGGGCTTGATCAGGTCCATAATTCAGC...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATGCTGAATTATGGACCTaGTCAAGCCCTTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYAELWT*SSPSPA
Trigger: GGCTGGGGAAGGGCTTGATCAGGTCCATAATTCAGC...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp AAGGATCTTGTTTCCTCACATCTACTCACAAGAGTAACCAAACTACACACAGTTGCTGAATTATGGACCTaGTCAAGCCCTTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KDLVSSHLLTRVTKLHTVAELWT*SSPSPA
Trigger: GGCTGGGGAAGGGCTTGATCAGGTCCATAATTCAGC...AACTGTGTGTAGTTTGGTTACTCTTGTGAGTAGATGTGAGGAAACAAGATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGGCTGAATTATGGACCTaGTCAAGCCCTTCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWAELWT*SSPSPA
Trigger: GGCTGGGGAAGGGCTTGATCAGGTCCATAATTCAGC...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTCCCATCAGATGGGTATaGAGGTACCATGGAACCCAT +
Preference number: 4 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTPIRWV*RYHGTH
Trigger: ATGGGTTCCATGGTACCTTCATACCCATCTGATGGG...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp CAAAGGAGTTCCCCATATTGTATGCTGTTCCATCCAGGTCATAATGAGGATGTGAGGAAGGAAATCCACTaGAGTGGCAGAATGACTCCT +
Preference number: 4 (lower is better)
Translates to: QRSSPYCMLFHPGHNEDVRKEIH*SGRMTP
Trigger: AGGAGTCATTCTGCCACTGCAGTGGATTTCCTTCCT...CACATCCTCATTATGACCTGGATGGAACAGCATACAATATGGGGAACTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR GCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACTGTGGTCAGCAGCGGTaGAACACATGGCAGACCCCG +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNCGQQR*NTWQTP
Trigger: CGGGGTCTGCCATGTGTTGCACCGCTGCTGACCACA...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR GCA 90 bp TCCCATCAAACCAATGATTGTACCTCACAGAGGAAGCAGATATTAATGCATATTAGACTCGAGCAGAGATaGCCCGTGGAGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SHQTNDCTSQRKQILMHIRLEQR*PVEPLP
Trigger: TGGAAGAGGCTCCACGGGGCATCTCTGCTCGAGTCT...AATATGCATTAATATCTGCTTCCTCTGTGAGGTACAATCATTGGTTTGATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531003.1
CDS-3UTR GCA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCTGTCACTGTGCCCTTTaGCATTCTGAACTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPCHCAL*HSELVK
Trigger: CTTCACCAGTTCAGAATGGCAAAGGGCACAGTGACA...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR GCA 90 bp TATTTGGGACATTGGTTTGGGAGGTACGGTGCCCTTTATGCTCTGTCTTTTGTAGAAGGAGCTGTCCAGTaGGTTTTTCCACCACATGAA +
Preference number: 4 (lower is better)
Translates to: YLGHWFGRYGALYALSFVEGAVQ*VFPPHE
Trigger: TTCATGTGGTGGAAAAACGCACTGGACAGCTCCTTC...TACAAAAGACAGAGCATAAAGGGCACCGTACCTCCCAAACCAATGTCCCAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR GCA 90 bp AAGAGCAAGAATTTGAGAGCACAAATAGGACCACGTGACAACAGTCCTTTGGACGAAGGAGCTGTCCAGTaGGTTTTTCCACCACATGAA +
Preference number: 4 (lower is better)
Translates to: KSKNLRAQIGPRDNSPLDEGAVQ*VFPPHE
Trigger: TTCATGTGGTGGAAAAACGCACTGGACAGCTCCTTC...GTCCAAAGGACTGTTGTCACGTGGTCCTATTTGTGCTCTCAAATTCTTGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTCTGCACAGGTACCTCTaGTCGGCCCAGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFLHRYL*SAQLFK
Trigger: TTTGAAGAGCTGGGCCGAGCAGAGGTACCTGTGCAG...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TATTTGGGACATTGGTTTGGGAGGTACGGTGCCCTTTATGCTCTGTCTTTTGTAGTTTGGGAGGTACGGTaGCCTTTATGCTCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: YLGHWFGRYGALYALSFVVWEVR*PLCSVF
Trigger: AAAGACAGAGCATAAAGGGCACCGTACCTCCCAAAC...TACAAAAGACAGAGCATAAAGGGCACCGTACCTCCCAAACCAATGTCCCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR GCA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTAAACCGAAGCTTGTATaGACTCGAGCCTCTGCCATG +
Preference number: 4 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTKPKLV*TRASAM
Trigger: CATGGCAGAGGCTCGAGTGCATACAAGCTTCGGTTT...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CCA 90 bp TCCCATCAAACCAATGATTGTACCTCACAGAGGAAGCAGATATTAATGCATATTAGCAGAGATGCCCCGTaGAGCCTCTTCCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: SHQTNDCTSQRKQILMHISRDAP*SLFHCG
Trigger: ACCACAGTGGAAGAGGCTCCACGGGGCATCTCTGCT...AATATGCATTAATATCTGCTTCCTCTGTGAGGTACAATCATTGGTTTGATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531003.1
CDS-3UTR CCA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACATAGGAGAAACCATATaGCCCAAAGGAGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHIGETI*PKGVPH
Trigger: ATGGGGAACTCCTTTGGGCCATATGGTTTCTCCTAT...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TATTTGGGACATTGGTTTGGGAGGTACGGTGCCCTTTATGCTCTGTCTTTTGTAAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTT +
Preference number: 4 (lower is better)
Translates to: YLGHWFGRYGALYALSFVKVHLL*RNPNNL
Trigger: AAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTT...TACAAAAGACAGAGCATAAAGGGCACCGTACCTCCCAAACCAATGTCCCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CCA 90 bp CCTTATAGGAGAAACCATATGGCCCAAAGGAGTTCCCCATATTGTATGCTGTTCAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTT +
Preference number: 4 (lower is better)
Translates to: PYRRNHMAQRSSPYCMLFKVHLL*RNPNNL
Trigger: AAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTT...GAACAGCATACAATATGGGGAACTCCTTTGGGCCATATGGTTTCTCCTATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR CCA 90 bp AGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTATAGAACATATCACCTaGACTCCATGGATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SNRTYHLDSMDCLPKVHLIEHIT*TPWIVS
Trigger: GGAGACAATCCATGGAGTCCAGGTGATATGTTCTAT...AAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR CCA 90 bp AGCAATGCCTCCATTGGTCATGATGGTGTATTAAGGGTAAAACCGAAGCTTGTAAACCGCGTATTACACTaGGGTTCCCAGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: SNASIGHDGVLRVKPKLVNRVLH*GSQLIP
Trigger: TGGGATAAGCTGGGAACCCCAGTGTAATACGCGGTT...TACAAGCTTCGGTTTTACCCTTAATACACCATCATGACCAATGGAGGCATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTGCTGTAGTATCTCCCTaGAAGGAGCTGTCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPAVVSP*KELSSA
Trigger: CGCACTGGACAGCTCCTTCCAGGGAGATACTACAGC...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATGCTGTAGTATCTCCCTaGAAGGAGCTGTCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYAVVSP*KELSSA
Trigger: CGCACTGGACAGCTCCTTCCAGGGAGATACTACAGC...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTGCTGTAGTATCTCCCTaGAAGGAGCTGTCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: LESSVFISPVFMSKCTLIAVVSP*KELSSA
Trigger: CGCACTGGACAGCTCCTTCCAGGGAGATACTACAGC...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACCCTGTTTCACAGCACTaGCTGAAGTATAGGACAATG +
Preference number: 4 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHPVSQH*LKYRTM
Trigger: CATTGTCCTATACTTCAGCCAGTGCTGTGAAACAGG...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TACTATGTGGCTGGCATTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATATTTCTTCATTGGTTCCTaGTGCTGGAACAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: YYVAGIVPGTGEDSSTLYFFIGS*CWNKNR
Trigger: CCTGTTTTTGTTCCAGCACCAGGAACCAATGAAGAA...ATATAGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAATGCCAGCCACATAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp GACATTGGTTTGGGAGGTACGGTGCCCTTTATGCTCTGTCTTTTGTATAGAGTAGGCGTGACTTGGCAGTaGCAAGGAAATAGTGAATTC +
Preference number: 4 (lower is better)
Translates to: DIGLGGTVPFMLCLLYRVGVTWQ*QGNSEF
Trigger: GAATTCACTATTTCCTTGCCACTGCCAAGTCACGCC...TACTCTATACAAAAGACAGAGCATAAAGGGCACCGTACCTCCCAAACCAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR TCA 90 bp CTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTCCAGCTTATCCCATCTaGAAAGGCCTTTCCCCGAAT +
Preference number: 4 (lower is better)
Translates to: LLESSVFISPVFMSKCTLPAYPI*KGLSPN
Trigger: ATTCGGGGAAAGGCCTTTTCAGATGGGATAAGCTGG...AAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp AGCAATGCCTCCATTGGTCATGATGGTGTATTAAGGGTAAAACCGAAGCTTGTACGTTTTTCCACCACATaGAACCGCGTATTACACTGG +
Preference number: 4 (lower is better)
Translates to: SNASIGHDGVLRVKPKLVRFSTT*NRVLHW
Trigger: CCAGTGTAATACGCGGTTTCATGTGGTGGAAAAACG...TACAAGCTTCGGTTTTACCCTTAATACACCATCATGACCAATGGAGGCATTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR TCA 90 bp ATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGATCCTTACTAAGCGTTTTTCCACCACATaGAACCGCGTATTACACTGG +
Preference number: 4 (lower is better)
Translates to: IGPRDNSPLDCCVMILTKRFSTT*NRVLHW
Trigger: CCAGTGTAATACGCGGTTTCATGTGGTGGAAAAACG...CTTAGTAAGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCTGCAGGCTTGTTACATaGGTATATTGTGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPCRLVT*VYCVLL
Trigger: CAGCAGCACACAATATACTCATGTAACAAGCCTGCA...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
CDS-3UTR TCA 90 bp CCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACAAAACCACATCAACCTTaGTCAGAGAATCCCCCACTA +
Preference number: 4 (lower is better)
Translates to: PLLESSVFISPVFMSKCTKPHQP*SENPPL
Trigger: TAGTGGGGGATTCTCTGATCAAGGTTGATGTGGTTT...TGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000526088.5
CDS-3UTR TCA 90 bp ATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGATCCTTACTAAGGTGTGGTGTTATTTCTaGGGCCTCTGTTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: IGPRDNSPLDCCVMILTKVWCYF*GLCCVP
Trigger: TGGAACACAACAGAGGCCTCAGAAATAACACCACAC...CTTAGTAAGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp CAGGCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAAAGGAAGGAAATCCACTaGAGTGGCAGAATGACTCCT +
Preference number: 4 (lower is better)
Translates to: QACYMSILCAAEVWTSNERKEIH*SGRMTP
Trigger: AGGAGTCATTCTGCCACTGCAGTGGATTTCCTTCCT...TTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357685.11
ENST00000361053.8
CDS-3UTR GCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAAAGACTCGAGCAGAGATaGCCCGTGGAGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKRLEQR*PVEPLP
Trigger: TGGAAGAGGCTCCACGGGGCATCTCTGCTCGAGTCT...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR GCA 90 bp TATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGAGACTCGAGCAGAGATaGCCCGTGGAGCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: YFSSLYVQVHTYFKPSFQRLEQR*PVEPLP
Trigger: TGGAAGAGGCTCCACGGGGCATCTCTGCTCGAGTCT...CTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR GCA 90 bp ATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGATCCTTACTAAGTGTCACTGTGCCCTTTaGCATTCTGAACTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: IGPRDNSPLDCCVMILTKCHCAL*HSELVK
Trigger: CTTCACCAGTTCAGAATGGCAAAGGGCACAGTGACA...CTTAGTAAGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp CCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACAGTTCAAAAACATTCTTaGATGGATCCGGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: PLLESSVFISPVFMSKCTVQKHS*MDPGEP
Trigger: TGGCTCTCCCGGATCCATGCAAGAATGTTTTTGAAC...TGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCGTCATAATGAGGATGTaGAGTTGCTCCATTCACAGC +
Preference number: 4 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPVIMRM*SCSIHS
Trigger: GCTGTGAATGGAGCAACTGCACATCCTCATTATGAC...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
CDS-3UTR GCA 90 bp CCTTATAGGAGAAACCATATGGCCCAAAGGAGTTCCCCATATTGTATGCTGTTCGTCATAATGAGGATGTaGAGTTGCTCCATTCACAGC +
Preference number: 4 (lower is better)
Translates to: PYRRNHMAQRSSPYCMLFVIMRM*SCSIHS
Trigger: GCTGTGAATGGAGCAACTGCACATCCTCATTATGAC...GAACAGCATACAATATGGGGAACTCCTTTGGGCCATATGGTTTCTCCTATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR GCA 90 bp AAGAGCAAGAATTTGAGAGCACAAATAGGACCACGTGACAACAGTCCTTTGGACGTCATAATGAGGATGTaGAGTTGCTCCATTCACAGC +
Preference number: 4 (lower is better)
Translates to: KSKNLRAQIGPRDNSPLDVIMRM*SCSIHS
Trigger: GCTGTGAATGGAGCAACTGCACATCCTCATTATGAC...GTCCAAAGGACTGTTGTCACGTGGTCCTATTTGTGCTCTCAAATTCTTGCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp AGAAACCATATGGCCCAAAGGAGTTCCCCATATTGTATGCTGTTCCATCCAGGTGTTCCCCATATTGTATaGTGTTCCATCCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: RNHMAQRSSPYCMLFHPGVPHIV*CSIQVI
Trigger: TATGACCTGGATGGAACAGCATACAATATGGGGAAC...ACCTGGATGGAACAGCATACAATATGGGGAACTCCTTTGGGCCATATGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR GCA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACTTCATTGGTTCCTGGTaGTGGAACAAAAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHFIGSW*WNKNRF
Trigger: GAACCTGTTTTTGTTCCAGCACCAGGAACCAATGAA...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GACATTGGTTTGGGAGGTACGGTGCCCTTTATGCTCTGTCTTTTGTATAGAGTAAAAAACATTCTTGCATaGATCCGGGAGAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: DIGLGGTVPFMLCLLYRVKNILA*IRESQC
Trigger: ACACTGGCTCTCCCGGATCCATGCAAGAATGTTTTT...TACTCTATACAAAAGACAGAGCATAAAGGGCACCGTACCTCCCAAACCAATGTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CCA 90 bp CAAAGGAGTTCCCCATATTGTATGCTGTTCCATCCAGGTCATAATGAGGATGTGAAAAACATTCTTGCATaGATCCGGGAGAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QRSSPYCMLFHPGHNEDVKNILA*IRESQC
Trigger: ACACTGGCTCTCCCGGATCCATGCAAGAATGTTTTT...CACATCCTCATTATGACCTGGATGGAACAGCATACAATATGGGGAACTCCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR CCA 90 bp GAAGGTTTCCCTTTCTCTGTAGAAGCAATAGAACATATCACCTGGACTCCATGGAAAAACATTCTTGCATaGATCCGGGAGAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: EGFPFSVEAIEHITWTPWKNILA*IRESQC
Trigger: ACACTGGCTCTCCCGGATCCATGCAAGAATGTTTTT...CCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAAAGGGAAACCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR CCA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATAGGAGAAACCATATaGCCCAAAGGAGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPIGETI*PKGVPH
Trigger: ATGGGGAACTCCTTTGGGCCATATGGTTTCTCCTAT...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTATCACCTGGACTCCATaGATTGTCTCCCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPITWTP*IVSPRS
Trigger: GGACCTTGGGGAGACAATCCATGGAGTCCAGGTGAT...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp CTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGATCACCTGGACTCCATaGATTGTCTCCCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LYVQVHTYFKPSFQTLWLITWTP*IVSPRS
Trigger: GGACCTTGGGGAGACAATCCATGGAGTCCAGGTGAT...CAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp ACATTGAGAGTGAAAGGATCTTGTTTCCTCACATCTACTCACAAGAGTAACCAAATCACCTGGACTCCATaGATTGTCTCCCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: TLRVKGSCFLTSTHKSNQITWTP*IVSPRS
Trigger: GGACCTTGGGGAGACAATCCATGGAGTCCAGGTGAT...TTGGTTACTCTTGTGAGTAGATGTGAGGAAACAAGATCCTTTCACTCTCAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTATCACCTGGACTCCATaGATTGTCTCCCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFITWTP*IVSPRS
Trigger: GGACCTTGGGGAGACAATCCATGGAGTCCAGGTGAT...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCATAGAACATATCACCTaGACTCCATGGATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CRSNRTYHLDSMDCLPKVIEHIT*TPWIVS
Trigger: GGAGACAATCCATGGAGTCCAGGTGATATGTTCTAT...GACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR CCA 90 bp GTTCCATTGGTGTATATATCTGTTTTGGTACCCATACCATGCTGTTTTTGTTACGCTGTAGTATCTCCCTaGAAGGAGCTGTCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: VPLVYISVLVPIPCCFCYAVVSP*KELSSA
Trigger: CGCACTGGACAGCTCCTTCCAGGGAGATACTACAGC...GTAACAAAAACAGCATGGTATGGGTACCAAAACAGATATATACACCAATGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp TACTATGTGGCTGGCATTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATATATTATAACACAGCCCTaGTCCTCAAAGGCATTGATT +
Preference number: 4 (lower is better)
Translates to: YYVAGIVPGTGEDSSTLYIITQP*SSKALI
Trigger: AATCAATGCCTTTGAGGACCAGGGCTGTGTTATAAT...ATATAGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAATGCCAGCCACATAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACTTCTTCATTGGTTCCTaGTGCTGGAACAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHFFIGS*CWNKNR
Trigger: CCTGTTTTTGTTCCAGCACCAGGAACCAATGAAGAA...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp AAGAGCAAGAATTTGAGAGCACAAATAGGACCACGTGACAACAGTCCTTTGGACGGAAAAGTTTCCTTGTaGTTGTCCCATCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: KSKNLRAQIGPRDNSPLDGKVSL*LSHQMG
Trigger: ACCCATCTGATGGGACAACCACAAGGAAACTTTTCC...GTCCAAAGGACTGTTGTCACGTGGTCCTATTTGTGCTCTCAAATTCTTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp CATCTACTATGTGGCTGGCATTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTTGTATATATCTGTTTTaGTACCCATACCATGCTGTT +
Preference number: 4 (lower is better)
Translates to: HLLCGWHCSRYWRGQLHSCIYLF*YPYHAV
Trigger: AACAGCATGGTATGGGTACCAAAACAGATATATACA...AGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAATGCCAGCCACATAGTAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp AGCAATGCCTCCATTGGTCATGATGGTGTATTAAGGGTAAAACCGAAGCTTGTAAGTACTACTAAACAGTaGACACGCACAGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: SNASIGHDGVLRVKPKLVSTTKQ*TRTELP
Trigger: AGGCAGTTCTGTGCGTGTTCACTGTTTAGTAGTACT...TACAAGCTTCGGTTTTACCCTTAATACACCATCATGACCAATGGAGGCATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR TCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTTCCCATGTACCTTTTaGAAACTGGGAGCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFFPCTF*KLGAGA
Trigger: TGCACCGGCTCCCAGTTTTCAAAAGGTACATGGGAA...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357685.11
ENST00000361053.8
CDS-3UTR TCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTTCCCATGTACCTTTTaGAAACTGGGAGCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPFPCTF*KLGAGA
Trigger: TGCACCGGCTCCCAGTTTTCAAAAGGTACATGGGAA...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357685.11
ENST00000361053.8
CDS-3UTR TCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAAGCCATTCTGAACTGGTaGAGCAGCGCCATCCCATCA +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKAILNW*SSAIPS
Trigger: TGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGC...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGGCCATTCTGAACTGGTaGAGCAGCGCCATCCCATCA +
Preference number: 4 (lower is better)
Translates to: YFSSLYVQVHTYFKPSFQAILNW*SSAIPS
Trigger: TGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGC...CTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAATGCCCTTTGCCATTCTaGACTGGTGAAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKCPLPF*TGEAAP
Trigger: TGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGGCA...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACCAGTGTGCCAAATTCTaGGATCACAATTCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHQCAKF*DHNSVF
Trigger: AAAAACCGAATTGTGATCTCAGAATTTGGCACACTG...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp GTTCCCCATATTGTATGCTGTTCCATCCAGGTCATAATGAGGATGTGCAGTTGCCAGTGTGCCAAATTCTaGGATCACAATTCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: VPHIVCCSIQVIMRMCSCQCAKF*DHNSVF
Trigger: AAAAACCGAATTGTGATCTCAGAATTTGGCACACTG...GCAACTGCACATCCTCATTATGACCTGGATGGAACAGCATACAATATGGGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR TCA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTCCAGCTTATCCCATCTaGAAAGGCCTTTCCCCGAAT +
Preference number: 4 (lower is better)
Translates to: LESSVFISPVFMSKCTLIPAYPI*KGLSPN
Trigger: ATTCGGGGAAAGGCCTTTTCAGATGGGATAAGCTGG...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TCCAAAGCTATGGTAGTAAGAAGGTTTCCCTTTCTCTGTAGAAGCAATAGAACACCAGCTTATCCCATCTaGAAAGGCCTTTCCCCGAAT +
Preference number: 4 (lower is better)
Translates to: SKAMVVRRFPFLCRSNRTPAYPI*KGLSPN
Trigger: ATTCGGGGAAAGGCCTTTTCAGATGGGATAAGCTGG...TGTTCTATTGCTTCTACAGAGAAAGGGAAACCTTCTTACTACCATAGCTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR TCA 90 bp ATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGATCCTTACTAAGTTTCACAGCACTGGCTaGAGTATAGGACAATGGACT +
Preference number: 4 (lower is better)
Translates to: IGPRDNSPLDCCVMILTKFHSTG*SIGQWT
Trigger: AGTCCATTGTCCTATACTTCAGCCAGTGCTGTGAAA...CTTAGTAAGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATCCCATCAGATGGGTATaGAGGTACCATGGAACCCAT +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYPIRWV*RYHGTH
Trigger: ATGGGTTCCATGGTACCTTCATACCCATCTGATGGG...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTCCCATCAGATGGGTATaGAGGTACCATGGAACCCAT +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPPIRWV*RYHGTH
Trigger: ATGGGTTCCATGGTACCTTCATACCCATCTGATGGG...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp CAGGCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACACTCTGTAGAAACTTaGTCCTGTATGTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: QACYMSILCAAEVWTSNEHSVET*SCMSLC
Trigger: GCACAGTGACATACAGGAGCAAGTTTCTACAGAGTG...TTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR GCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTCCGGGAGAGCCAGTGTaGCAAATTCTGAGATCACAA +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFPGEPV*QILRSQ
Trigger: TTGTGATCTCAGAATTTGGCACACTGGCTCTCCCGG...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTCCGGGAGAGCCAGTGTaGCAAATTCTGAGATCACAA +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPPGEPV*QILRSQ
Trigger: TTGTGATCTCAGAATTTGGCACACTGGCTCTCCCGG...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp AAGGATCTTGTTTCCTCACATCTACTCACAAGAGTAACCAAACTACACACAGTTCCGGGAGAGCCAGTGTaGCAAATTCTGAGATCACAA +
Preference number: 4 (lower is better)
Translates to: KDLVSSHLLTRVTKLHTVPGEPV*QILRSQ
Trigger: TTGTGATCTCAGAATTTGGCACACTGGCTCTCCCGG...AACTGTGTGTAGTTTGGTTACTCTTGTGAGTAGATGTGAGGAAACAAGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp TACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATCACCGTTCCCCATATTGTATaGTGTTCCATCCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: YMSILCAAEVWTSNEPITVPHIV*CSIQVI
Trigger: TATGACCTGGATGGAACAGCATACAATATGGGGAAC...GGTGATGGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
CDS-3UTR GCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACTGCACAGGTACCTCTaGTCGGCCCAGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKLHRYL*SAQLFK
Trigger: TTTGAAGAGCTGGGCCGAGCAGAGGTACCTGTGCAG...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TTTCCCTTTCTCTGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTGTCTTATAGGAGAAACCTaGAGCTTTACCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FPFLCRSNRTYHLDSMDCLIGET*SFTRQL
Trigger: GAGCTGCCTGGTAAAGCTGCAGGTTTCTCCTATAAG...ACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAAAGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534550.5
CDS-3UTR CCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGGTACCTTTTGAAAACTaGGAGCCGGTGCACCATCAC +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWVPFEN*EPVHHH
Trigger: GTGATGGTGCACCGGCTCCCAGTTTTCAAAAGGTAC...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357685.11
ENST00000361053.8
CDS-3UTR CCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTGTACCTTTTGAAAACTaGGAGCCGGTGCACCATCAC +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFVPFEN*EPVHHH
Trigger: GTGATGGTGCACCGGCTCCCAGTTTTCAAAAGGTAC...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357685.11
ENST00000361053.8
CDS-3UTR CCA 90 bp CAGGCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAAAAAAACATTCTTGCATaGATCCGGGAGAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QACYMSILCAAEVWTSNEKNILA*IRESQC
Trigger: ACACTGGCTCTCCCGGATCCATGCAAGAATGTTTTT...TTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGCCTG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTAAAAACATTCTTGCATaGATCCGGGAGAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTKNILA*IRESQC
Trigger: ACACTGGCTCTCCCGGATCCATGCAAGAATGTTTTT...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp CCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACAATAGAACATATCACCTaGACTCCATGGATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLLESSVFISPVFMSKCTIEHIT*TPWIVS
Trigger: GGAGACAATCCATGGAGTCCAGGTGATATGTTCTAT...TGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATAGAACATATCACCTaGACTCCATGGATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPIEHIT*TPWIVS
Trigger: GGAGACAATCCATGGAGTCCAGGTGATATGTTCTAT...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGAACCGCGTATTACACTaGGGTTCCCAGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWNRVLH*GSQLIP
Trigger: TGGGATAAGCTGGGAACCCCAGTGTAATACGCGGTT...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp AAGGATCTTGTTTCCTCACATCTACTCACAAGAGTAACCAAACTACACACAGTTAACCGCGTATTACACTaGGGTTCCCAGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: KDLVSSHLLTRVTKLHTVNRVLH*GSQLIP
Trigger: TGGGATAAGCTGGGAACCCCAGTGTAATACGCGGTT...AACTGTGTGTAGTTTGGTTACTCTTGTGAGTAGATGTGAGGAAACAAGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp GTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTAACCGCGTATTACACTaGGGTTCCCAGCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: VFMSKCTLILNLVSRPCGNRVLH*GSQLIP
Trigger: TGGGATAAGCTGGGAACCCCAGTGTAATACGCGGTT...ACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAAGCTGTAGTATCTCCCTaGAAGGAGCTGTCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKAVVSP*KELSSA
Trigger: CGCACTGGACAGCTCCTTCCAGGGAGATACTACAGC...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCTTCGAGGGAAAGATTTaGCTGCTGAATTATGGACCT +
Preference number: 4 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPFEGKI*LLNYGP
Trigger: AGGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAA...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp TACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATCACCTTCTTCATTGGTTCCTaGTGCTGGAACAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: YMSILCAAEVWTSNEPITFFIGS*CWNKNR
Trigger: CCTGTTTTTGTTCCAGCACCAGGAACCAATGAAGAA...GGTGATGGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
CDS-3UTR CCA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACAAATTGCTTTCATTCTaGTTGGGAGTGATCACCACA +
Preference number: 4 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHKLLSF*LGVITT
Trigger: TGTGGTGATCACTCCCAACCAGAATGAAAGCAATTT...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTGTCTATTTGGGACATTaGTTTGGGAGGTACGGTGCC +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFVYLGH*FGRYGA
Trigger: GGCACCGTACCTCCCAAACCAATGTCCCAAATAGAC...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
3UTR CAA 72 bp CAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTaGTGGTTGTCCCATCAGATGGGTATGAAGGTACCA +
Preference number: 4 (lower is better)
Translates to: QVHTYFKPSFQT*WLSHQMGMKVP
Trigger: TGGTACCTTCATACCCATCTGATGGGACAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525175.1
CDS-3UTR TCA 90 bp CAGGCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAAATTGAGCAGATCCAGTaGTTTCCAAATCCTCTCACA +
Preference number: 4 (lower is better)
Translates to: QACYMSILCAAEVWTSNEIEQIQ*FPNPLT
Trigger: TGTGAGAGGATTTGGAAATCACTGGATCTGCTCAAT...TTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357685.11
ENST00000361053.8
CDS-3UTR TCA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATCCCATCAAACCAATaGTTGTACTTATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPIPSNQ*LYLSFP
Trigger: TGGGAAGGATAAGTACAATCATTGGTTTGATGGGAT...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR TCA 90 bp TTGAGAGCACAAATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGATCCCATCAAACCAATaGTTGTACTTATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LRAQIGPRDNSPLDCCVMIPSNQ*LYLSFP
Trigger: TGGGAAGGATAAGTACAATCATTGGTTTGATGGGAT...CATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTATTTGTGCTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp GTTCCATTGGTGTATATATCTGTTTTGGTACCCATACCATGCTGTTTTTGTTACCCAGCTTATCCCATCTaGAAAGGCCTTTCCCCGAAT +
Preference number: 4 (lower is better)
Translates to: VPLVYISVLVPIPCCFCYPAYPI*KGLSPN
Trigger: ATTCGGGGAAAGGCCTTTTCAGATGGGATAAGCTGG...GTAACAAAAACAGCATGGTATGGGTACCAAAACAGATATATACACCAATGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTCGTTTTTCCACCACATaGAACCGCGTATTACACTGG +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFRFSTT*NRVLHW
Trigger: CCAGTGTAATACGCGGTTTCATGTGGTGGAAAAACG...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGCGTTTTTCCACCACATaGAACCGCGTATTACACTGG +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWRFSTT*NRVLHW
Trigger: CCAGTGTAATACGCGGTTTCATGTGGTGGAAAAACG...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTCGTTTTTCCACCACATaGAACCGCGTATTACACTGG +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPRFSTT*NRVLHW
Trigger: CCAGTGTAATACGCGGTTTCATGTGGTGGAAAAACG...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp ATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGATCCTTACTAAGGAAAGATTTGGCTGCTaGATTATGGACCTGATCAAG +
Preference number: 4 (lower is better)
Translates to: IGPRDNSPLDCCVMILTKERFGC*IMDLIK
Trigger: CTTGATCAGGTCCATAATTCAGCAGCCAAATCTTTC...CTTAGTAAGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTCACCACATCAACCTTaGTCAGAGAATCCCCCACTA +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTSPHQP*SENPPL
Trigger: TAGTGGGGGATTCTCTGATCAAGGTTGATGTGGTGA...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000532593.5
CDS-3UTR TCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTCACCACATCAACCTTaGTCAGAGAATCCCCCACTA +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWSPHQP*SENPPL
Trigger: TAGTGGGGGATTCTCTGATCAAGGTTGATGTGGTGA...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000532593.5
CDS-3UTR TCA 90 bp ACATTGAGAGTGAAAGGATCTTGTTTCCTCACATCTACTCACAAGAGTAACCAATCACCACATCAACCTTaGTCAGAGAATCCCCCACTA +
Preference number: 4 (lower is better)
Translates to: TLRVKGSCFLTSTHKSNQSPHQP*SENPPL
Trigger: TAGTGGGGGATTCTCTGATCAAGGTTGATGTGGTGA...TTGGTTACTCTTGTGAGTAGATGTGAGGAAACAAGATCCTTTCACTCTCAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp TTACTAAGGGAAATTCTAAAGCCATTCTTATCCACAAGCATGTATGGACCCATTCCCATCAGATGGGTATaGAGGTACCATGGAACCCAT +
Preference number: 4 (lower is better)
Translates to: LLREILKPFLSTSMYGPIPIRWV*RYHGTH
Trigger: ATGGGTTCCATGGTACCTTCATACCCATCTGATGGG...AATGGGTCCATACATGCTTGTGGATAAGAATGGCTTTAGAATTTCCCTTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTACTACCAGTACTCCTTaGGTACAGGGTCTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFTTSTP*VQGLVF
Trigger: AAACACCAGACCCTGTACTCAAGGAGTACTGGTAGT...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438022.5
CDS-3UTR TCA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACCAAACTTTTTGCCACTaGATCGATCATAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHQTFCH*IDHSRS
Trigger: AGATCTACTATGATCGATTCAGTGGCAAAAAGTTTG...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525175.1
CDS-3UTR GCA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTGTCACTGTGCCCTTTaGCATTCTGAACTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LESSVFISPVFMSKCTLICHCAL*HSELVK
Trigger: CTTCACCAGTTCAGAATGGCAAAGGGCACAGTGACA...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTGTCACTGTGCCCTTTaGCATTCTGAACTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFCHCAL*HSELVK
Trigger: CTTCACCAGTTCAGAATGGCAAAGGGCACAGTGACA...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp CTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTGTTCAAAAACATTCTTaGATGGATCCGGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLESSVFISPVFMSKCTLVQKHS*MDPGEP
Trigger: TGGCTCTCCCGGATCCATGCAAGAATGTTTTTGAAC...AAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TTTCCCTTTCTCTGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTGTGTTCAAAAACATTCTTaGATGGATCCGGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FPFLCRSNRTYHLDSMDCVQKHS*MDPGEP
Trigger: TGGCTCTCCCGGATCCATGCAAGAATGTTTTTGAAC...ACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAAAGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR GCA 90 bp GAAGGTTTCCCTTTCTCTGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATGAGGATGTGCAGTTaGTCCATTCACAGCAATAAA +
Preference number: 4 (lower is better)
Translates to: EGFPFSVEAIEHITWTPWMRMCS*SIHSNK
Trigger: TTTATTGCTGTGAATGGAGCAACTGCACATCCTCAT...CCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAAAGGGAAACCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR GCA 90 bp CTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTGTCATAATGAGGATGTaGAGTTGCTCCATTCACAGC +
Preference number: 4 (lower is better)
Translates to: LLESSVFISPVFMSKCTLVIMRM*SCSIHS
Trigger: GCTGTGAATGGAGCAACTGCACATCCTCATTATGAC...AAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp ATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGATCCTTACTAAGGTTCCCCATATTGTATaGTGTTCCATCCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: IGPRDNSPLDCCVMILTKVPHIV*CSIQVI
Trigger: TATGACCTGGATGGAACAGCATACAATATGGGGAAC...CTTAGTAAGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTGAAGGAGCTGTCCAGTaGGTTTTTCCACCACATGAA +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPEGAVQ*VFPPHE
Trigger: TTCATGTGGTGGAAAAACGCACTGGACAGCTCCTTC...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTGAAGGAGCTGTCCAGTaGGTTTTTCCACCACATGAA +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFEGAVQ*VFPPHE
Trigger: TTCATGTGGTGGAAAAACGCACTGGACAGCTCCTTC...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTTCATTGGTTCCTGGTaGTGGAACAAAAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTFIGSW*WNKNRF
Trigger: GAACCTGTTTTTGTTCCAGCACCAGGAACCAATGAA...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCCTTATAGGAGAAACCTaGAGCTTTACCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTLIGET*SFTRQL
Trigger: GAGCTGCCTGGTAAAGCTGCAGGTTTCTCCTATAAG...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361053.8
CDS-3UTR CCA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTT +
Preference number: 4 (lower is better)
Translates to: LESSVFISPVFMSKCTLIKVHLL*RNPNNL
Trigger: AAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTT...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTT +
Preference number: 4 (lower is better)
Translates to: VFMSKCTLILNLVSRPCGKVHLL*RNPNNL
Trigger: AAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTT...ACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTT +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFKVHLL*RNPNNL
Trigger: AAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTT...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GCTATGGTAGTAAGAAGGTTTCCCTTTCTCTGTAGAAGCAATAGAACATATCACAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTT +
Preference number: 4 (lower is better)
Translates to: AMVVRRFPFLCRSNRTYHKVHLL*RNPNNL
Trigger: AAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTT...GTGATATGTTCTATTGCTTCTACAGAGAAAGGGAAACCTTCTTACTACCATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR CCA 90 bp TACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATCACCATTATAACACAGCCCTaGTCCTCAAAGGCATTGATT +
Preference number: 4 (lower is better)
Translates to: YMSILCAAEVWTSNEPITIITQP*SSKALI
Trigger: AATCAATGCCTTTGAGGACCAGGGCTGTGTTATAAT...GGTGATGGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CCA 90 bp ATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGATCCTTACTAAGTTCGAGGGAAAGATTTaGCTGCTGAATTATGGACCT +
Preference number: 4 (lower is better)
Translates to: IGPRDNSPLDCCVMILTKFEGKI*LLNYGP
Trigger: AGGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAA...CTTAGTAAGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp CTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTCCTGTTTCACAGCACTaGCTGAAGTATAGGACAATG +
Preference number: 4 (lower is better)
Translates to: LLESSVFISPVFMSKCTLPVSQH*LKYRTM
Trigger: CATTGTCCTATACTTCAGCCAGTGCTGTGAAACAGG...AAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp CCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACAAAATTGCTTTCATTCTaGTTGGGAGTGATCACCACA +
Preference number: 4 (lower is better)
Translates to: PLLESSVFISPVFMSKCTKLLSF*LGVITT
Trigger: TGTGGTGATCACTCCCAACCAGAATGAAAGCAATTT...TGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTAGTTTCCAGACCTTGTaGTTGTCCCATCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFSFQTL*LSHQMG
Trigger: ACCCATCTGATGGGACAACCACAAGGTCTGGAAACT...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATAGTTTCCAGACCTTGTaGTTGTCCCATCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYSFQTL*LSHQMG
Trigger: ACCCATCTGATGGGACAACCACAAGGTCTGGAAACT...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTAGTTTCCAGACCTTGTaGTTGTCCCATCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: LESSVFISPVFMSKCTLISFQTL*LSHQMG
Trigger: ACCCATCTGATGGGACAACCACAAGGTCTGGAAACT...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTAGTTTCCAGACCTTGTaGTTGTCCCATCAGATGGGT +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPSFQTL*LSHQMG
Trigger: ACCCATCTGATGGGACAACCACAAGGTCTGGAAACT...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTTGGGACATTGGTTTaGGAGGTACGGTGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWFGTLV*EVRCPL
Trigger: TAAAGGGCACCGTACCTCCCAAACCAATGTCCCAAA...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CCA 90 bp ATTAGCAATTCTTCTGCCAGTGTAGACACATTGAGAGTGAAAGGATCTTGTTTCCATCTACTATGTGGCTaGCATTGTTCCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: ISNSSASVDTLRVKGSCFHLLCG*HCSRYW
Trigger: CCAGTACCTGGAACAATGCCAGCCACATAGTAGATG...GAAACAAGATCCTTTCACTCTCAATGTGTCTACACTGGCAGAAGAATTGCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp CAGGCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAAATCCCATCAAACCAATaGTTGTACTTATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: QACYMSILCAAEVWTSNEIPSNQ*LYLSFP
Trigger: TGGGAAGGATAAGTACAATCATTGGTTTGATGGGAT...TTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR TCA 90 bp AAACTAAATGTCTATTTGGGACATTGGTTTGGGAGGTACGGTGCCCTTTATGCTCAGTGTGCCAAATTCTaGGATCACAATTCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: KLNVYLGHWFGRYGALYAQCAKF*DHNSVF
Trigger: AAAAACCGAATTGTGATCTCAGAATTTGGCACACTG...AGCATAAAGGGCACCGTACCTCCCAAACCAATGTCCCAAATAGACATTTAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR TCA 90 bp ATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGATCCTTACTAAGCAGTGTGCCAAATTCTaGGATCACAATTCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: IGPRDNSPLDCCVMILTKQCAKF*DHNSVF
Trigger: AAAAACCGAATTGTGATCTCAGAATTTGGCACACTG...CTTAGTAAGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp TTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATATGAGAAAAATCATCACTCAGGGGCATTCAAACTaGCATTTAAAGGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: LFQVLERTAPLYMRKIITQGHSN*HLKAKQ
Trigger: TTGTTTTGCCTTTAAATGTCAGTTTGAATGCCCCTG...AGTGATGATTTTTCTCATATAGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTTTCACAGCACTGGCTaGAGTATAGGACAATGGACT +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFFHSTG*SIGQWT
Trigger: AGTCCATTGTCCTATACTTCAGCCAGTGCTGTGAAA...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTCACAGCACTGGCTaGAGTATAGGACAATGGACT +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYFHSTG*SIGQWT
Trigger: AGTCCATTGTCCTATACTTCAGCCAGTGCTGTGAAA...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTTCACAGCACTGGCTaGAGTATAGGACAATGGACT +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTFHSTG*SIGQWT
Trigger: AGTCCATTGTCCTATACTTCAGCCAGTGCTGTGAAA...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCGATACTTTTTGCCACTaGATCGATCATAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPDTFCH*IDHSRS
Trigger: AGATCTACTATGATCGATTCAGTGGCAAAAAGTATC...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR TCA 90 bp TATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGCCCATCAGATGGGTATaGAGGTACCATGGAACCCAT +
Preference number: 4 (lower is better)
Translates to: YFSSLYVQVHTYFKPSFQPIRWV*RYHGTH
Trigger: ATGGGTTCCATGGTACCTTCATACCCATCTGATGGG...CTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp GTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGCAGGCTTGTTACATaGGTATATTGTGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VFMSKCTLILNLVSRPCGCRLVT*VYCVLL
Trigger: CAGCAGCACACAATATACTCATGTAACAAGCCTGCA...ACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
CDS-3UTR TCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTGCAGGCTTGTTACATaGGTATATTGTGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWCRLVT*VYCVLL
Trigger: CAGCAGCACACAATATACTCATGTAACAAGCCTGCA...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
CDS-3UTR TCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTGCAGGCTTGTTACATaGGTATATTGTGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTCRLVT*VYCVLL
Trigger: CAGCAGCACACAATATACTCATGTAACAAGCCTGCA...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
CDS-3UTR TCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCAATTGCTATCTCATCTaGGCCACACAGGACACAAAG +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTNCYLI*ATQDTK
Trigger: CTTTGTGTCCTGTGTGGCTCAGATGAGATAGCAATT...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438022.5
CDS-3UTR GCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGCACTCTGTAGAAACTTaGTCCTGTATGTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWHSVET*SCMSLC
Trigger: GCACAGTGACATACAGGAGCAAGTTTCTACAGAGTG...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTCACTCTGTAGAAACTTaGTCCTGTATGTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFHSVET*SCMSLC
Trigger: GCACAGTGACATACAGGAGCAAGTTTCTACAGAGTG...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp GTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTCACTCTGTAGAAACTTaGTCCTGTATGTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: VFMSKCTLILNLVSRPCGHSVET*SCMSLC
Trigger: GCACAGTGACATACAGGAGCAAGTTTCTACAGAGTG...ACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCGGGAGAGCCAGTGTaGCAAATTCTGAGATCACAA +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKPGEPV*QILRSQ
Trigger: TTGTGATCTCAGAATTTGGCACACTGGCTCTCCCGG...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGGTTCAAAAACATTCTTaGATGGATCCGGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWVQKHS*MDPGEP
Trigger: TGGCTCTCCCGGATCCATGCAAGAATGTTTTTGAAC...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCGTCATAATGAGGATGTaGAGTTGCTCCATTCACAGC +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTVIMRM*SCSIHS
Trigger: GCTGTGAATGGAGCAACTGCACATCCTCATTATGAC...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp CTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTGTACGGTGCCCTTTATaGTCTGTCTTTTGTATAGAG +
Preference number: 4 (lower is better)
Translates to: LLESSVFISPVFMSKCTLVRCPL*SVFCIE
Trigger: CTCTATACAAAAGACAGAGCATAAAGGGCACCGTAC...AAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR GCA 90 bp TTGAGAGCACAAATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGCCTTCAAGATCCAGTTaGCATGTCATTTGCTTTATA +
Preference number: 4 (lower is better)
Translates to: LRAQIGPRDNSPLDCCVMPSRSS*HVICFI
Trigger: TATAAAGCAAATGACATGGCAACTGGATCTTGAAGG...CATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTATTTGTGCTCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTAAAAACATTCTTGCATaGATCCGGGAGAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LESSVFISPVFMSKCTLIKNILA*IRESQC
Trigger: ACACTGGCTCTCCCGGATCCATGCAAGAATGTTTTT...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCAAAAACATTCTTGCATaGATCCGGGAGAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTKNILA*IRESQC
Trigger: ACACTGGCTCTCCCGGATCCATGCAAGAATGTTTTT...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCATAGGAGAAACCATATaGCCCAAAGGAGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTIGETI*PKGVPH
Trigger: ATGGGGAACTCCTTTGGGCCATATGGTTTCTCCTAT...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GCTATGGTAGTAAGAAGGTTTCCCTTTCTCTGTAGAAGCAATAGAACATATCACATAGGAGAAACCATATaGCCCAAAGGAGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: AMVVRRFPFLCRSNRTYHIGETI*PKGVPH
Trigger: ATGGGGAACTCCTTTGGGCCATATGGTTTCTCCTAT...GTGATATGTTCTATTGCTTCTACAGAGAAAGGGAAACCTTCTTACTACCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR CCA 90 bp GTTCCATTGGTGTATATATCTGTTTTGGTACCCATACCATGCTGTTTTTGTTACAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTT +
Preference number: 4 (lower is better)
Translates to: VPLVYISVLVPIPCCFCYKVHLL*RNPNNL
Trigger: AAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTT...GTAACAAAAACAGCATGGTATGGGTACCAAAACAGATATATACACCAATGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTCCTGTTTCACAGCACTaGCTGAAGTATAGGACAATG +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFPVSQH*LKYRTM
Trigger: CATTGTCCTATACTTCAGCCAGTGCTGTGAAACAGG...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp CTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGCCTGTTTCACAGCACTaGCTGAAGTATAGGACAATG +
Preference number: 4 (lower is better)
Translates to: LYVQVHTYFKPSFQTLWLPVSQH*LKYRTM
Trigger: CATTGTCCTATACTTCAGCCAGTGCTGTGAAACAGG...CAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp ATTAGCAATTCTTCTGCCAGTGTAGACACATTGAGAGTGAAAGGATCTTGTTTCCCTGTTTCACAGCACTaGCTGAAGTATAGGACAATG +
Preference number: 4 (lower is better)
Translates to: ISNSSASVDTLRVKGSCFPVSQH*LKYRTM
Trigger: CATTGTCCTATACTTCAGCCAGTGCTGTGAAACAGG...GAAACAAGATCCTTTCACTCTCAATGTGTCTACACTGGCAGAAGAATTGCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp AGGGAAATTCTAAAGCCATTCTTATCCACAAGCATGTATGGACCCATTTATTACTGGGCATCTACTATGTaGCTGGCATTGTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: REILKPFLSTSMYGPIYYWASTM*LALFQV
Trigger: TACCTGGAACAATGCCAGCCACATAGTAGATGCCCA...GTAATAAATGGGTCCATACATGCTTGTGGATAAGAATGGCTTTAGAATTTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp CTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTCAGTGTGCCAAATTCTaGGATCACAATTCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LLESSVFISPVFMSKCTLQCAKF*DHNSVF
Trigger: AAAAACCGAATTGTGATCTCAGAATTTGGCACACTG...AAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCGTTTTTCCACCACATaGAACCGCGTATTACACTGG +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNRFSTT*NRVLHW
Trigger: CCAGTGTAATACGCGGTTTCATGTGGTGGAAAAACG...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTGAAAGATTTGGCTGCTaGATTATGGACCTGATCAAG +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFERFGC*IMDLIK
Trigger: CTTGATCAGGTCCATAATTCAGCAGCCAAATCTTTC...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCGAAAGATTTGGCTGCTaGATTATGGACCTGATCAAG +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTERFGC*IMDLIK
Trigger: CTTGATCAGGTCCATAATTCAGCAGCCAAATCTTTC...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTGAAAGATTTGGCTGCTaGATTATGGACCTGATCAAG +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPERFGC*IMDLIK
Trigger: CTTGATCAGGTCCATAATTCAGCAGCCAAATCTTTC...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATATGAGAAAAATCATCACTGATACTTTTTGCCACTaGATCGATCATAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: LFQVLERTAPLYMRKIITDTFCH*IDHSRS
Trigger: AGATCTACTATGATCGATTCAGTGGCAAAAAGTATC...AGTGATGATTTTTCTCATATAGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTGCCTCCATTGGTCATaGTGGTGTATTAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWCLHWS*WCIKGK
Trigger: TTTACCCTTAATACACCATCATGACCAATGGAGGCA...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR GCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAAAGGAAGGAAATCCACTaGAGTGGCAGAATGACTCCT +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKRKEIH*SGRMTP
Trigger: AGGAGTCATTCTGCCACTGCAGTGGATTTCCTTCCT...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357685.11
ENST00000361053.8
CDS-3UTR GCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACTGTCACTGTGCCCTTTaGCATTCTGAACTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNCHCAL*HSELVK
Trigger: CTTCACCAGTTCAGAATGGCAAAGGGCACAGTGACA...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp ATCACAATTCGGTTTTTAGCACTGTTGGCCTTATATGTATCACTCTGTAGAAACCACTCTGTAGAAACTTaGTCCTGTATGTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: ITIRFLALLALYVSLCRNHSVET*SCMSLC
Trigger: GCACAGTGACATACAGGAGCAAGTTTCTACAGAGTG...GTTTCTACAGAGTGATACATATAAGGCCAACAGTGCTAAAAACCGAATTGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR GCA 90 bp GTTCCATTGGTGTATATATCTGTTTTGGTACCCATACCATGCTGTTTTTGTTACCACTCTGTAGAAACTTaGTCCTGTATGTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: VPLVYISVLVPIPCCFCYHSVET*SCMSLC
Trigger: GCACAGTGACATACAGGAGCAAGTTTCTACAGAGTG...GTAACAAAAACAGCATGGTATGGGTACCAAAACAGATATATACACCAATGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTGTTCCCCATATTGTATaGTGTTCCATCCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPVPHIV*CSIQVI
Trigger: TATGACCTGGATGGAACAGCATACAATATGGGGAAC...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTGTTCCCCATATTGTATaGTGTTCCATCCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFVPHIV*CSIQVI
Trigger: TATGACCTGGATGGAACAGCATACAATATGGGGAAC...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAAGAAGGAGCTGTCCAGTaGGTTTTTCCACCACATGAA +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKEGAVQ*VFPPHE
Trigger: TTCATGTGGTGGAAAAACGCACTGGACAGCTCCTTC...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACGAAGGAGCTGTCCAGTaGGTTTTTCCACCACATGAA +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNEGAVQ*VFPPHE
Trigger: TTCATGTGGTGGAAAAACGCACTGGACAGCTCCTTC...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTTCATTGGTTCCTGGTaGTGGAACAAAAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPFIGSW*WNKNRF
Trigger: GAACCTGTTTTTGTTCCAGCACCAGGAACCAATGAA...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTCATTGGTTCCTGGTaGTGGAACAAAAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: LESSVFISPVFMSKCTLIFIGSW*WNKNRF
Trigger: GAACCTGTTTTTGTTCCAGCACCAGGAACCAATGAA...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp CTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGTTCATTGGTTCCTGGTaGTGGAACAAAAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: LYVQVHTYFKPSFQTLWLFIGSW*WNKNRF
Trigger: GAACCTGTTTTTGTTCCAGCACCAGGAACCAATGAA...CAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp CCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACAAGTTGCCATGTCATTTaGTTTATAAACACAGCATTC +
Preference number: 4 (lower is better)
Translates to: PLLESSVFISPVFMSKCTSCHVI*FINTAF
Trigger: GAATGCTGTGTTTATAAAGCAAATGACATGGCAACT...TGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TTACTAAGGGAAATTCTAAAGCCATTCTTATCCACAAGCATGTATGGACCCATTAAAAACATTCTTGCATaGATCCGGGAGAGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LLREILKPFLSTSMYGPIKNILA*IRESQC
Trigger: ACACTGGCTCTCCCGGATCCATGCAAGAATGTTTTT...AATGGGTCCATACATGCTTGTGGATAAGAATGGCTTTAGAATTTCCCTTAGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp GTTCCATTGGTGTATATATCTGTTTTGGTACCCATACCATGCTGTTTTTGTTACATAGGAGAAACCATATaGCCCAAAGGAGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: VPLVYISVLVPIPCCFCYIGETI*PKGVPH
Trigger: ATGGGGAACTCCTTTGGGCCATATGGTTTCTCCTAT...GTAACAAAAACAGCATGGTATGGGTACCAAAACAGATATATACACCAATGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTT +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNKVHLL*RNPNNL
Trigger: AAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTT...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATATAGAACATATCACCTaGACTCCATGGATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYIEHIT*TPWIVS
Trigger: GGAGACAATCCATGGAGTCCAGGTGATATGTTCTAT...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp CTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGATAGAACATATCACCTaGACTCCATGGATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LYVQVHTYFKPSFQTLWLIEHIT*TPWIVS
Trigger: GGAGACAATCCATGGAGTCCAGGTGATATGTTCTAT...CAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTTTCGAGGGAAAGATTTaGCTGCTGAATTATGGACCT +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFFEGKI*LLNYGP
Trigger: AGGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAA...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp CTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGTTCGAGGGAAAGATTTaGCTGCTGAATTATGGACCT +
Preference number: 4 (lower is better)
Translates to: LYVQVHTYFKPSFQTLWLFEGKI*LLNYGP
Trigger: AGGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAA...CAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTTTCTTCATTGGTTCCTaGTGCTGGAACAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFFFIGS*CWNKNR
Trigger: CCTGTTTTTGTTCCAGCACCAGGAACCAATGAAGAA...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp AAGAGCAAGAATTTGAGAGCACAAATAGGACCACGTGACAACAGTCCTTTGGACTCTGTTGTGTTCCATTaGTGTATATATCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: KSKNLRAQIGPRDNSPLDSVVFH*CIYLFW
Trigger: CCAAAACAGATATATACACCAATGGAACACAACAGA...GTCCAAAGGACTGTTGTCACGTGGTCCTATTTGTGCTCTCAAATTCTTGCTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTCACACTGGCAGTTTTaGGTACTACTAAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: LESSVFISPVFMSKCTLISHWQF*VLLNSE
Trigger: TTCACTGTTTAGTAGTACTCAAAACTGCCAGTGTGA...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357685.11
ENST00000361053.8
CDS-3UTR TCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTCACACTGGCAGTTTTaGGTACTACTAAACAGTGAA +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYSHWQF*VLLNSE
Trigger: TTCACTGTTTAGTAGTACTCAAAACTGCCAGTGTGA...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357685.11
ENST00000361053.8
CDS-3UTR TCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATCAGTGTGCCAAATTCTaGGATCACAATTCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYQCAKF*DHNSVF
Trigger: AAAAACCGAATTGTGATCTCAGAATTTGGCACACTG...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp GTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTCAGTGTGCCAAATTCTaGGATCACAATTCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: VFMSKCTLILNLVSRPCGQCAKF*DHNSVF
Trigger: AAAAACCGAATTGTGATCTCAGAATTTGGCACACTG...ACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTCAGGGGCATTCAAACTaGCATTTAAAGGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPQGHSN*HLKAKQ
Trigger: TTGTTTTGCCTTTAAATGTCAGTTTGAATGCCCCTG...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGCAGGGGCATTCAAACTaGCATTTAAAGGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWQGHSN*HLKAKQ
Trigger: TTGTTTTGCCTTTAAATGTCAGTTTGAATGCCCCTG...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATCAGGGGCATTCAAACTaGCATTTAAAGGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYQGHSN*HLKAKQ
Trigger: TTGTTTTGCCTTTAAATGTCAGTTTGAATGCCCCTG...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACTTTCACAGCACTGGCTaGAGTATAGGACAATGGACT +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNFHSTG*SIGQWT
Trigger: AGTCCATTGTCCTATACTTCAGCCAGTGCTGTGAAA...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGTTTCACAGCACTGGCTaGAGTATAGGACAATGGACT +
Preference number: 4 (lower is better)
Translates to: YFSSLYVQVHTYFKPSFQFHSTG*SIGQWT
Trigger: AGTCCATTGTCCTATACTTCAGCCAGTGCTGTGAAA...CTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACTGCAGGCTTGTTACATaGGTATATTGTGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNCRLVT*VYCVLL
Trigger: CAGCAGCACACAATATACTCATGTAACAAGCCTGCA...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
CDS-3UTR TCA 90 bp CTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTGTCTTGTATGATAAATaGTACTACCAGTACTCCTTG +
Preference number: 4 (lower is better)
Translates to: LLESSVFISPVFMSKCTLVLYDK*YYQYSL
Trigger: CAAGGAGTACTGGTAGTATCATTTATCATACAAGAC...AAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438022.5
CDS-3UTR TCA 90 bp TCCCATCAAACCAATGATTGTACCTCACAGAGGAAGCAGATATTAATGCATATTATCCCATCAAACCAATaGTTGTACCTCACAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SHQTNDCTSQRKQILMHIIPSNQ*LYLTEE
Trigger: TTCCTCTGTGAGGTACAATCATTGGTTTGATGGGAT...AATATGCATTAATATCTGCTTCCTCTGTGAGGTACAATCATTGGTTTGATGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531003.1
CDS-3UTR GCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACACTCTGTAGAAACTTaGTCCTGTATGTCACTGTGC +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKHSVET*SCMSLC
Trigger: GCACAGTGACATACAGGAGCAAGTTTCTACAGAGTG...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAAGTTCAAAAACATTCTTaGATGGATCCGGGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKVQKHS*MDPGEP
Trigger: TGGCTCTCCCGGATCCATGCAAGAATGTTTTTGAAC...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTATGAGGATGTGCAGTTaGTCCATTCACAGCAATAAA +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPMRMCS*SIHSNK
Trigger: TTTATTGCTGTGAATGGAGCAACTGCACATCCTCAT...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATATGAGGATGTGCAGTTaGTCCATTCACAGCAATAAA +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYMRMCS*SIHSNK
Trigger: TTTATTGCTGTGAATGGAGCAACTGCACATCCTCAT...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAAGTCATAATGAGGATGTaGAGTTGCTCCATTCACAGC +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKVIMRM*SCSIHS
Trigger: GCTGTGAATGGAGCAACTGCACATCCTCATTATGAC...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp AGGGAAATTCTAAAGCCATTCTTATCCACAAGCATGTATGGACCCATTTATTACTTCATTGGTTCCTGGTaGTGGAACAAAAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: REILKPFLSTSMYGPIYYFIGSW*WNKNRF
Trigger: GAACCTGTTTTTGTTCCAGCACCAGGAACCAATGAA...GTAATAAATGGGTCCATACATGCTTGTGGATAAGAATGGCTTTAGAATTTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAAATAGGAGAAACCATATaGCCCAAAGGAGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKIGETI*PKGVPH
Trigger: ATGGGGAACTCCTTTGGGCCATATGGTTTCTCCTAT...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp AGGGAAATTCTAAAGCCATTCTTATCCACAAGCATGTATGGACCCATTTATTACATAGAACATATCACCTaGACTCCATGGATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: REILKPFLSTSMYGPIYYIEHIT*TPWIVS
Trigger: GGAGACAATCCATGGAGTCCAGGTGATATGTTCTAT...GTAATAAATGGGTCCATACATGCTTGTGGATAAGAATGGCTTTAGAATTTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCATTATAACACAGCCCTaGTCCTCAAAGGCATTGATT +
Preference number: 4 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTIITQP*SSKALI
Trigger: AATCAATGCCTTTGAGGACCAGGGCTGTGTTATAAT...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTATTATAACACAGCCCTaGTCCTCAAAGGCATTGATT +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFIITQP*SSKALI
Trigger: AATCAATGCCTTTGAGGACCAGGGCTGTGTTATAAT...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTAAATTGCTTTCATTCTaGTTGGGAGTGATCACCACA +
Preference number: 4 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPKLLSF*LGVITT
Trigger: TGTGGTGATCACTCCCAACCAGAATGAAAGCAATTT...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTAAATTGCTTTCATTCTaGTTGGGAGTGATCACCACA +
Preference number: 4 (lower is better)
Translates to: LESSVFISPVFMSKCTLIKLLSF*LGVITT
Trigger: TGTGGTGATCACTCCCAACCAGAATGAAAGCAATTT...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATAAATTGCTTTCATTCTaGTTGGGAGTGATCACCACA +
Preference number: 4 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYKLLSF*LGVITT
Trigger: TGTGGTGATCACTCCCAACCAGAATGAAAGCAATTT...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TATCCACAAGCATGTATGGACCCATTTATTACTCTGGGTTGGCATAGTGTGAATTTTATTACTCTGGGTTaGCATAGTGTGAATACAGAC +
Preference number: 4 (lower is better)
Translates to: YPQACMDPFITLGWHSVNFITLG*HSVNTD
Trigger: GTCTGTATTCACACTATGCCAACCCAGAGTAATAAA...ATTCACACTATGCCAACCCAGAGTAATAAATGGGTCCATACATGCTTGTGGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR CAA 72 bp ACACATATTAGCAATTCTTCTGCCAGTGTAGACACATaGAGAGTGAAAGGATCTTGTTTCCTCACATCTACT +
Preference number: 4 (lower is better)
Translates to: THISNSSASVDT*RVKGSCFLTST
Trigger: AGTAGATGTGAGGAAACAAGATCCTTTCACTCTCAATGTGTCTACACTGGCAGAAGAATTGCTAATATGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
3UTR CAA 72 bp CCAAATTCTGAGATCACAATTCGGTTTTTAGCACTGTaGGCCTTATATGTATCACTCTGTAGAAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: PNSEITIRFLAL*ALYVSLCRNLL
Trigger: GAGCAAGTTTCTACAGAGTGATACATATAAGGCCAACAGTGCTAAAAACCGAATTGTGATCTCAGAATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR TCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAAGAAAGATTTGGCTGCTaGATTATGGACCTGATCAAG +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKERFGC*IMDLIK
Trigger: CTTGATCAGGTCCATAATTCAGCAGCCAAATCTTTC...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGGATACTTTTTGCCACTaGATCGATCATAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWDTFCH*IDHSRS
Trigger: AGATCTACTATGATCGATTCAGTGGCAAAAAGTATC...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGGTTCCCCATATTGTATaGTGTTCCATCCAGGTCATA +
Preference number: 4 (lower is better)
Translates to: YFSSLYVQVHTYFKPSFQVPHIV*CSIQVI
Trigger: TATGACCTGGATGGAACAGCATACAATATGGGGAAC...CTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACTTCATTGGTTCCTGGTaGTGGAACAAAAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNFIGSW*WNKNRF
Trigger: GAACCTGTTTTTGTTCCAGCACCAGGAACCAATGAA...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTCCTTCAAGATCCAGTTaGCATGTCATTTGCTTTATA +
Preference number: 4 (lower is better)
Translates to: LESSVFISPVFMSKCTLIPSRSS*HVICFI
Trigger: TATAAAGCAAATGACATGGCAACTGGATCTTGAAGG...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGCCTTCAAGATCCAGTTaGCATGTCATTTGCTTTATA +
Preference number: 4 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWPSRSS*HVICFI
Trigger: TATAAAGCAAATGACATGGCAACTGGATCTTGAAGG...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp AGGGAAATTCTAAAGCCATTCTTATCCACAAGCATGTATGGACCCATTTATTACAATCATGTCACCTCTTaGTTCCATTCACTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: REILKPFLSTSMYGPIYYNHVTS*FHSLFH
Trigger: GTGAAAGAGTGAATGGAAGCAAGAGGTGACATGATT...GTAATAAATGGGTCCATACATGCTTGTGGATAAGAATGGCTTTAGAATTTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp AGGGAAATTCTAAAGCCATTCTTATCCACAAGCATGTATGGACCCATTTATTACTTGGTACCCATACCATaGTGTTTTTGTTACTGTAGG +
Preference number: 4 (lower is better)
Translates to: REILKPFLSTSMYGPIYYLVPIP*CFCYCR
Trigger: CCTACAGTAACAAAAACAGCATGGTATGGGTACCAA...GTAATAAATGGGTCCATACATGCTTGTGGATAAGAATGGCTTTAGAATTTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACATAGAACATATCACCTaGACTCCATGGATTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNIEHIT*TPWIVS
Trigger: GGAGACAATCCATGGAGTCCAGGTGATATGTTCTAT...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGTTCGAGGGAAAGATTTaGCTGCTGAATTATGGACCT +
Preference number: 4 (lower is better)
Translates to: YFSSLYVQVHTYFKPSFQFEGKI*LLNYGP
Trigger: AGGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAA...CTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAATTCGAGGGAAAGATTTaGCTGCTGAATTATGGACCT +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKFEGKI*LLNYGP
Trigger: AGGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAA...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAATTCTTCATTGGTTCCTaGTGCTGGAACAAAAACAGG +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKFFIGS*CWNKNR
Trigger: CCTGTTTTTGTTCCAGCACCAGGAACCAATGAAGAA...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TTACTAAGGGAAATTCTAAAGCCATTCTTATCCACAAGCATGTATGGACCCATTAAATTGCTTTCATTCTaGTTGGGAGTGATCACCACA +
Preference number: 4 (lower is better)
Translates to: LLREILKPFLSTSMYGPIKLLSF*LGVITT
Trigger: TGTGGTGATCACTCCCAACCAGAATGAAAGCAATTT...AATGGGTCCATACATGCTTGTGGATAAGAATGGCTTTAGAATTTCCCTTAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR TCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAAATCCCATCAAACCAATaGTTGTACTTATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKIPSNQ*LYLSFP
Trigger: TGGGAAGGATAAGTACAATCATTGGTTTGATGGGAT...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR TCA 90 bp TATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGATCCCATCAAACCAATaGTTGTACTTATCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: YFSSLYVQVHTYFKPSFQIPSNQ*LYLSFP
Trigger: TGGGAAGGATAAGTACAATCATTGGTTTGATGGGAT...CTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR TCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCAGGGGCATTCAAACTaGCATTTAAAGGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNQGHSN*HLKAKQ
Trigger: TTGTTTTGCCTTTAAATGTCAGTTTGAATGCCCCTG...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACAGGGGCATTCAAACTaGCATTTAAAGGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKQGHSN*HLKAKQ
Trigger: TTGTTTTGCCTTTAAATGTCAGTTTGAATGCCCCTG...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACATCCCATCAAACCAATaGTTGTACCTAACTCATCCT +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNIPSNQ*LYLTHP
Trigger: AGGATGAGTTAGGTACAATCATTGGTTTGATGGGAT...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532593.5
CDS-3UTR TCA 90 bp TTACTAAGGGAAATTCTAAAGCCATTCTTATCCACAAGCATGTATGGACCCATTCAGCTCCACTCTATATaGGAAAAATCATCACTGTAT +
Preference number: 4 (lower is better)
Translates to: LLREILKPFLSTSMYGPIQLHSI*EKSSLY
Trigger: ATACAGTGATGATTTTTCTCATATAGAGTGGAGCTG...AATGGGTCCATACATGCTTGTGGATAAGAATGGCTTTAGAATTTCCCTTAGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR GCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACATGAGGATGTGCAGTTaGTCCATTCACAGCAATAAA +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNMRMCS*SIHSNK
Trigger: TTTATTGCTGTGAATGGAGCAACTGCACATCCTCAT...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTCAAGTCCCTGAATCCTaGCTTAAATATTGCATAAAA +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFQVPES*LKYCIK
Trigger: TTTTATGCAATATTTAAGGCAGGATTCAGGGACTTG...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438022.5
CDS-3UTR GCA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTAGTTGCCATGTCATTTaGTTTATAAACACAGCATTC +
Preference number: 4 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFSCHVI*FINTAF
Trigger: GAATGCTGTGTTTATAAAGCAAATGACATGGCAACT...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAGTTGCCATGTCATTTaGTTTATAAACACAGCATTC +
Preference number: 4 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFSCHVI*FINTAF
Trigger: GAATGCTGTGTTTATAAAGCAAATGACATGGCAACT...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGATTATAACACAGCCCTaGTCCTCAAAGGCATTGATT +
Preference number: 4 (lower is better)
Translates to: YFSSLYVQVHTYFKPSFQIITQP*SSKALI
Trigger: AATCAATGCCTTTGAGGACCAGGGCTGTGTTATAAT...CTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CCA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACAAATTGCTTTCATTCTaGTTGGGAGTGATCACCACA +
Preference number: 4 (lower is better)
Translates to: SSVFISPVFMSKCTLILNKLLSF*LGVITT
Trigger: TGTGGTGATCACTCCCAACCAGAATGAAAGCAATTT...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR TCA 90 bp TATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGGATACTTTTTGCCACTaGATCGATCATAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: YFSSLYVQVHTYFKPSFQDTFCH*IDHSRS
Trigger: AGATCTACTATGATCGATTCAGTGGCAAAAAGTATC...CTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR GCA 90 bp GTTCCATTGGTGTATATATCTGTTTTGGTACCCATACCATGCTGTTTTTGTTACAGTTGCCATGTCATTTaGTTTATAAACACAGCATTC +
Preference number: 4 (lower is better)
Translates to: VPLVYISVLVPIPCCFCYSCHVI*FINTAF
Trigger: GAATGCTGTGTTTATAAAGCAAATGACATGGCAACT...GTAACAAAAACAGCATGGTATGGGTACCAAAACAGATATATACACCAATGGAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS GCA 90 bp GTCTGGCAAGTGCTGGGTGAGGGAGAGAGTGGTATGAGGAGACATTaGCCTTCCTTCAGGAACTTGTGGGGAAACAGCTCAGTCACCACA +
Preference number: 5 (lower is better)
Translates to: VWQVLGEGESGMRRH*PSFRNLWGNSSVTT
Trigger: TGTGGTGACTGAGCTGTTTCCCCACAAGTTCCTGAAGGAAGGGCAATGTCTCCTCATACCACTCTCTCCCTCACCCAGCACTTGCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461480.1
CDS-3UTR CAA 90 bp TGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACCCGAATAACCTTATAGGAGAACCTGGACTCCATGGATaGTCTCCCCAAGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: CLPKVHLLWRNPNNLIGEPGLHG*SPQGPP
Trigger: AGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGG...TTCTCCTATAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR CAA 90 bp CATGGAACCCATAAGGCATCTGCACAGGTACCTCTGCTCGGCCCAGCTCTTCAACCTAGTTTCCAGACCTaGTGGTTGTCCCATCAGATG +
Preference number: 5 (lower is better)
Translates to: HGTHKASAQVPLLGPALQPSFQT*WLSHQM
Trigger: CATCTGATGGGACAACCACAAGGTCTGGAAACTAGG...TTGAAGAGCTGGGCCGAGCAGAGGTACCTGTGCAGATGCCTTATGGGTTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525175.1
CDS-3UTR CAA 90 bp AACCGAAGCTTGTATGCACTCGAGCCTCTGCCATGGCGTGACTTGGCAGTGGCACGAAGTAGAGAGCCATaGAGCCACTTAGGAAAATGT +
Preference number: 5 (lower is better)
Translates to: NRSLYALEPLPWRDLAVARSREP*SHLGKC
Trigger: ACATTTTCCTAAGTGGCTCAATGGCTCTCTACTTCG...TGCCACTGCCAAGTCACGCCATGGCAGAGGCTCGAGTGCATACAAGCTTCGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CAA 90 bp ACCCATAAGGCATCTGCACAGGTACCTCTGCTCGGCCCAGCTCTTCAAAGTTCTTTCCAGACCTTGTGGTaGTCCCATCAGATGGGTATG +
Preference number: 5 (lower is better)
Translates to: THKASAQVPLLGPALQSSFQTLW*SHQMGM
Trigger: CATACCCATCTGATGGGACAACCACAAGGTCTGGAA...AGAACTTTGAAGAGCTGGGCCGAGCAGAGGTACCTGTGCAGATGCCTTATGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525175.1
CDS TCA 90 bp ATGAGAGCACCAGATCGTTCCATCAGCCTGTTTCACAGCACTGGCTaGAGTATAGGACAATGGACTCAGGTTGTCTCCCTCAGGGGCATT +
Preference number: 5 (lower is better)
Translates to: MRAPDRSISLFHSTG*SIGQWTQVVSLRGI
Trigger: AATGCCCCTGAGGGAGACAACCTGAGTCCATTGTCCTATACTTCAGCCAGTGCTGTGAAACAGGCTGATGGAACGATCTGGTGCTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000494860.5
ENST00000526088.5
ENST00000530677.1
ENST00000531169.5
ENST00000532593.5
CDS TCA 90 bp GCCCTTCCTTCAGGAACTTGTGGGGAAACAGCTCAGTCACCACACTaGCAGCTTCTGACACCTCTCTTCTTTTGGTACAAACCACAGAGG +
Preference number: 5 (lower is better)
Translates to: ALPSGTCGETAQSPH*QLLTPLFFWYKPQR
Trigger: CCTCTGTGGTTTGTACCAAAAGAAGAGAGGTGTCAGAAGCTGTCAGTGTGGTGACTGAGCTGTTTCCCCACAAGTTCCTGAAGGAAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461480.1
CDS CCA 90 bp TTTCATGAGAGCACCAGATCGTTCCATCAGCCTGTTTCACAGCACTaGCTGAAGTATAGGACAATGGACTCAGGTTGTCTCCCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: FHESTRSFHQPVSQH*LKYRTMDSGCLPQG
Trigger: CCCCTGAGGGAGACAACCTGAGTCCATTGTCCTATACTTCAGCCAGTGCTGTGAAACAGGCTGATGGAACGATCTGGTGCTCTCATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000494860.5
ENST00000526088.5
ENST00000530677.1
ENST00000531169.5
ENST00000532593.5
CDS TCA 90 bp CAGCCTTCTTTAACTTCCAGGACTCTGCGGAATTGCTATCTCATCTaGGCCACACAGGACACAAAGCTTCAGAAGCTCCCAGCAACCTTC +
Preference number: 5 (lower is better)
Translates to: QPSLTSRTLRNCYLI*ATQDTKLQKLPATF
Trigger: GAAGGTTGCTGGGAGCTTCTGAAGCTTTGTGTCCTGTGTGGCTCAGATGAGATAGCAATTCCGCAGAGTCCTGGAAGTTAAAGAAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438022.5
ENST00000534122.5
CDS-3UTR CAA 90 bp ATTGGTCATGATGGTGTATTAAGGGTAAAACCGAAGCTTGTATGCACTCGAGCCCCTGGACTCCATGGATaGTCTCCCCAAGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: IGHDGVLRVKPKLVCTRAPGLHG*SPQGPP
Trigger: AGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGG...GGCTCGAGTGCATACAAGCTTCGGTTTTACCCTTAATACACCATCATGACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CAA 90 bp CCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACCTGGACTCCATGGATaGTCTCCCCAAGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: PLLESSVFISPVFMSKCTPGLHG*SPQGPP
Trigger: AGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGG...TGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp CCTTTCTCTGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCTGGACTCCATGGATaGTCTCCCCAAGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: PFSVEAIEHITWTPWIVSPGLHG*SPQGPP
Trigger: AGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGG...GGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS TCA 90 bp ACAGGCTTGGAAAAGTTTCCTTGTGGTTGTCCCATCAGATGGGTATaGAGGTACCATGGAACCCATAAGGCATCTGCACAGGTACCTCTG +
Preference number: 5 (lower is better)
Translates to: TGLEKFPCGCPIRWV*RYHGTHKASAQVPL
Trigger: CAGAGGTACCTGTGCAGATGCCTTATGGGTTCCATGGTACCTTCATACCCATCTGATGGGACAACCACAAGGAAACTTTTCCAAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS CCA 90 bp TCATTCCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCTaGAGGAACCCGAATAACCTTATAGGAGAAACCATATGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: SFLDSMDCLPKVHLL*RNPNNLIGETIWPK
Trigger: TTTGGGCCATATGGTTTCTCCTATAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460924.6
CDS TCA 90 bp CAGGAACTTGTGGGGAAACAGCTCAGTCACCACACTGACAGCTTCTaGCACCTCTCTTCTTTTGGTACAAACCACAGAGGGCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: QELVGKQLSHHTDSF*HLSSFGTNHRGLQI
Trigger: AATTTGAAGCCCTCTGTGGTTTGTACCAAAAGAAGAGAGGTGTCAGAAGCTGTCAGTGTGGTGACTGAGCTGTTTCCCCACAAGTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461480.1
CDS TCA 90 bp TCTGTAGAAACTTGCTCCTGTATGTCACTGTGCCCTTTGCCATTCTaGACTGGTGAAGCAGCGCCATCCCATCAAACCAATGATTGTACC +
Preference number: 5 (lower is better)
Translates to: SVETCSCMSLCPLPF*TGEAAPSHQTNDCT
Trigger: GGTACAATCATTGGTTTGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGGCACAGTGACATACAGGAGCAAGTTTCTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000494860.5
ENST00000527939.1
ENST00000532593.5
ENST00000534550.5
CDS TCA 90 bp GGCAAACTAGAGTTGTCTGAAATGTGCCAGTTATGGGGACTTGTCTaGATGCCTGGACACGTTACTGATGCCCTAAACAAATGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: GKLELSEMCQLWGLV*MPGHVTDALNKCQP
Trigger: TGGCTGGCATTTGTTTAGGGCATCAGTAACGTGTCCAGGCATTCAGACAAGTCCCCATAACTGGCACATTTCAGACAACTCTAGTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527198.1
CDS-3UTR CAA 90 bp AAGCAGCGCCATCCCATCAAACCAATGATTGTACCTCACAGAGGAAGCAGATATTTTCCCATGTACCTTTaGAAAACTGGGAGCCGGTGC +
Preference number: 5 (lower is better)
Translates to: KQRHPIKPMIVPHRGSRYFPMYL*KTGSRC
Trigger: GCACCGGCTCCCAGTTTTCAAAAGGTACATGGGAAA...ATATCTGCTTCCTCTGTGAGGTACAATCATTGGTTTGATGGGATGGCGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531003.1
CDS-3UTR CAA 90 bp GTTCCCCATATTGTATGCTGTTCCATCCAGGTCATAATGAGGATGTGCAGTTGCCGTTCAAAAACATTCTaGCATGGATCCGGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: VPHIVCCSIQVIMRMCSCRSKTF*HGSGRA
Trigger: GGCTCTCCCGGATCCATGCAAGAATGTTTTTGAACG...GCAACTGCACATCCTCATTATGACCTGGATGGAACAGCATACAATATGGGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR CAA 90 bp AATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCACCTTCTCAAGGAGTTCCCCATATaGTATGCTGTTCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: NRTYHLDSMDCLPKVHLLKEFPI*YAVPSR
Trigger: CCTGGATGGAACAGCATACAATATGGGGAACTCCTT...GAGAAGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR CAA 90 bp TATCCACAAGCATGTATGGACCCATTTATTACTCTGGGTTGGCATAGTGTGAATCCTGGACTCCATGGATaGTCTCCCCAAGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: YPQACMDPFITLGWHSVNPGLHG*SPQGPP
Trigger: AGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGG...ATTCACACTATGCCAACCCAGAGTAATAAATGGGTCCATACATGCTTGTGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp ATAGGACCACGTGACAACAGTCCTTTGGACTGTTGTGTAATGATCCTTACTAAGGACAATGGACTCAGGTaGTCTCCCTCAGGGGCATTC +
Preference number: 5 (lower is better)
Translates to: IGPRDNSPLDCCVMILTKDNGLR*SPSGAF
Trigger: GAATGCCCCTGAGGGAGACAACCTGAGTCCATTGTC...CTTAGTAAGGATCATTACACAACAGTCCAAAGGACTGTTGTCACGTGGTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp TACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATCACCCAGGACTCTGCGGAATaGCTATCTCATCTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: YMSILCAAEVWTSNEPITQDSAE*LSHLSH
Trigger: GTGGCTCAGATGAGATAGCAATTCCGCAGAGTCCTG...GGTGATGGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438022.5
CDS TCA 90 bp TCTGTAGAAACTTGCTCCTGTATGTCACTGTGCCCTTTGCCATTCTaGACTGGTGAAGCAGCGCCATCCCATCAAACCAATGATTGTACT +
Preference number: 5 (lower is better)
Translates to: SVETCSCMSLCPLPF*TGEAAPSHQTNDCT
Trigger: AGTACAATCATTGGTTTGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGGCACAGTGACATACAGGAGCAAGTTTCTACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000526088.5
ENST00000531169.5
ENST00000532612.5
ENST00000534122.5
CDS-3UTR CAA 90 bp TGTCTCCCCAAGGTCCACCTTCTCTGGAGGAACCCGAATAACCTTATAGGAGAACGGTTTTTAGCACTGTaGGCCTTATATGTATCACTC +
Preference number: 5 (lower is better)
Translates to: CLPKVHLLWRNPNNLIGERFLAL*ALYVSL
Trigger: GAGTGATACATATAAGGCCAACAGTGCTAAAAACCG...TTCTCCTATAAGGTTATTCGGGTTCCTCCAGAGAAGGTGGACCTTGGGGAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR CAA 90 bp TACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATCACCCGTTCAAAAACATTCTaGCATGGATCCGGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: YMSILCAAEVWTSNEPITRSKTF*HGSGRA
Trigger: GGCTCTCCCGGATCCATGCAAGAATGTTTTTGAACG...GGTGATGGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CAA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGCCTGGACTCCATGGATaGTCTCCCCAAGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWPGLHG*SPQGPP
Trigger: AGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGG...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp GTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTCCTGGACTCCATGGATaGTCTCCCCAAGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: VFMSKCTLILNLVSRPCGPGLHG*SPQGPP
Trigger: AGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGG...ACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACCTTCGAGGGAAAGATTaGGCTGCTGAATTATGGACC +
Preference number: 5 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHLRGKD*AAELWT
Trigger: GGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAAG...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp CTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTGACAATGGACTCAGGTaGTCTCCCTCAGGGGCATTC +
Preference number: 5 (lower is better)
Translates to: LLESSVFISPVFMSKCTLDNGLR*SPSGAF
Trigger: GAATGCCCCTGAGGGAGACAACCTGAGTCCATTGTC...AAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACTTCACCACATCAACCTaGATCAGAGAATCCCCCACT +
Preference number: 5 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHFTTST*IRESPT
Trigger: AGTGGGGGATTCTCTGATCAAGGTTGATGTGGTGAA...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000532593.5
CDS-3UTR CAA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACTCACTCTGTAGAAACTaGCTCCTGTATGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHSLCRN*LLYVTV
Trigger: CACAGTGACATACAGGAGCAAGTTTCTACAGAGTGA...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp AGAAACCATATGGCCCAAAGGAGTTCCCCATATTGTATGCTGTTCCATCCAGGTTCACTCTGTAGAAACTaGCTCCTGTATGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: RNHMAQRSSPYCMLFHPGSLCRN*LLYVTV
Trigger: CACAGTGACATACAGGAGCAAGTTTCTACAGAGTGA...ACCTGGATGGAACAGCATACAATATGGGGAACTCCTTTGGGCCATATGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527939.1
CDS-3UTR CAA 90 bp GGTTTCCCTTTCTCTGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTCGTTCAAAAACATTCTaGCATGGATCCGGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: GFPFSVEAIEHITWTPWIRSKTF*HGSGRA
Trigger: GGCTCTCCCGGATCCATGCAAGAATGTTTTTGAACG...AATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAAAGGGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR CAA 90 bp TATTTGGGACATTGGTTTGGGAGGTACGGTGCCCTTTATGCTCTGTCTTTTGTACTTCGAGGGAAAGATTaGGCTGCTGAATTATGGACC +
Preference number: 5 (lower is better)
Translates to: YLGHWFGRYGALYALSFVLRGKD*AAELWT
Trigger: GGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAAG...TACAAAAGACAGAGCATAAAGGGCACCGTACCTCCCAAACCAATGTCCCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CAA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCCTTCGAGGGAAAGATTaGGCTGCTGAATTATGGACC +
Preference number: 5 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPLRGKD*AAELWT
Trigger: GGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAAG...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CAA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGGACAATGGACTCAGGTaGTCTCCCTCAGGGGCATTC +
Preference number: 5 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWDNGLR*SPSGAF
Trigger: GAATGCCCCTGAGGGAGACAACCTGAGTCCATTGTC...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp GGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTGACAATGGACTCAGGTaGTCTCCCTCAGGGGCATTC +
Preference number: 5 (lower is better)
Translates to: GVLSVYFSSLYVQVHTYFDNGLR*SPSGAF
Trigger: GAATGCCCCTGAGGGAGACAACCTGAGTCCATTGTC...AAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp CTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGGACAATGGACTCAGGTaGTCTCCCTCAGGGGCATTC +
Preference number: 5 (lower is better)
Translates to: LYVQVHTYFKPSFQTLWLDNGLR*SPSGAF
Trigger: GAATGCCCCTGAGGGAGACAACCTGAGTCCATTGTC...CAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATCACCTTCACCACATCAACCTaGATCAGAGAATCCCCCACT +
Preference number: 5 (lower is better)
Translates to: YMSILCAAEVWTSNEPITFTTST*IRESPT
Trigger: AGTGGGGGATTCTCTGATCAAGGTTGATGTGGTGAA...GGTGATGGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
CDS-3UTR CAA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTTCCAGACCTTGTGGTaGTCCCATCAGATGGGTATG +
Preference number: 5 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTFQTLW*SHQMGM
Trigger: CATACCCATCTGATGGGACAACCACAAGGTCTGGAA...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATCACCTACTACCAGTACTCCTaGAGTACAGGGTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: YMSILCAAEVWTSNEPITYYQYS*STGSGV
Trigger: AACACCAGACCCTGTACTCAAGGAGTACTGGTAGTA...GGTGATGGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438022.5
CDS-3UTR CAA 90 bp TACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATCACCCAAACCACATCAACCTaGATCAGAGAATCCCCCACT +
Preference number: 5 (lower is better)
Translates to: YMSILCAAEVWTSNEPITQTTST*IRESPT
Trigger: AGTGGGGGATTCTCTGATCAAGGTTGATGTGGTTTG...GGTGATGGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526088.5
CDS TCA 90 bp TATAGGACAATGGACTCAGGTTGTCTCCCTCAGGGGCATTCAAACTaGCATTTAAAGGCAAAACAAACCTTCGAGGGAAAGATTTGGCTG +
Preference number: 5 (lower is better)
Translates to: YRTMDSGCLPQGHSN*HLKAKQTFEGKIWL
Trigger: CAGCCAAATCTTTCCCTCGAAGGTTTGTTTTGCCTTTAAATGTCAGTTTGAATGCCCCTGAGGGAGACAACCTGAGTCCATTGTCCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000494860.5
ENST00000526088.5
ENST00000530677.1
ENST00000531169.5
ENST00000532593.5
CDS TCA 90 bp CATCTTCTCTCCAAACCTTCAGTGTCTTATTCACCACATCAACCTTaGTCAGAGAATCCCCCACTAAATGCCGAAAGCCACAGCCATAAA +
Preference number: 5 (lower is better)
Translates to: HLLSKPSVSYSPHQP*SENPPLNAESHSHK
Trigger: TTTATGGCTGTGGCTTTCGGCATTTAGTGGGGGATTCTCTGATCAAGGTTGATGTGGTGAATAAGACACTGAAGGTTTGGAGAGAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000531169.5
ENST00000532593.5
ENST00000532716.1
CDS TCA 90 bp AATGTGCCAGTTATGGGGACTTGTCTGAATGCCTGGACACGTTACTaGTGCCCTAAACAAATGCCAGCCAGAAATACATGTTTACTGTCT +
Preference number: 5 (lower is better)
Translates to: NVPVMGTCLNAWTRY*CPKQMPARNTCLLS
Trigger: AGACAGTAAACATGTATTTCTGGCTGGCATTTGTTTAGGGCATCAGTAACGTGTCCAGGCATTCAGACAAGTCCCCATAACTGGCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527198.1
CDS-3UTR CAA 90 bp CCTTTCTCTGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCTCACTCTGTAGAAACTaGCTCCTGTATGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: PFSVEAIEHITWTPWIVSSLCRN*LLYVTV
Trigger: CACAGTGACATACAGGAGCAAGTTTCTACAGAGTGA...GGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACAGAGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR CAA 90 bp TGTAGAAGCAATAGAACATATCACCTGGACTCCATGGATTGTCTCCCCAAGGTCCGGTTTTTAGCACTGTaGGCCTTATATGTATCACTC +
Preference number: 5 (lower is better)
Translates to: CRSNRTYHLDSMDCLPKVRFLAL*ALYVSL
Trigger: GAGTGATACATATAAGGCCAACAGTGCTAAAAACCG...GACCTTGGGGAGACAATCCATGGAGTCCAGGTGATATGTTCTATTGCTTCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527939.1
ENST00000534550.5
CDS-3UTR CAA 90 bp TTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATATGAGAAAAATCATCACTAAGGAGTTCCCCATATaGTATGCTGTTCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: LFQVLERTAPLYMRKIITKEFPI*YAVPSR
Trigger: CCTGGATGGAACAGCATACAATATGGGGAACTCCTT...AGTGATGATTTTTCTCATATAGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCCTGGACTCCATGGATaGTCTCCCCAAGGTCCACCT +
Preference number: 5 (lower is better)
Translates to: SSVFISPVFMSKCTLILNPGLHG*SPQGPP
Trigger: AGGTGGACCTTGGGGAGACAATCCATGGAGTCCAGG...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCATCACCTTGCTTTCATTCTGGTaGGGAGTGATCACCACAGAA +
Preference number: 5 (lower is better)
Translates to: YMSILCAAEVWTSNEPITLLSFW*GVITTE
Trigger: TTCTGTGGTGATCACTCCCAACCAGAATGAAAGCAA...GGTGATGGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
CDS-3UTR CAA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCTTGCTTTCATTCTGGTaGGGAGTGATCACCACAGAA +
Preference number: 5 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPLLSFW*GVITTE
Trigger: TTCTGTGGTGATCACTCCCAACCAGAATGAAAGCAA...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
CDS GCA 90 bp GTTCCCCATATTGTATGCTGTTCCATCCAGGTCATAATGAGGATGTaGAGTTGCTCCATTCACAGCAATAAATTTGCTCCAATCTACCTG +
Preference number: 5 (lower is better)
Translates to: VPHIVCCSIQVIMRM*SCSIHSNKFAPIYL
Trigger: CAGGTAGATTGGAGCAAATTTATTGCTGTGAATGGAGCAACTGCACATCCTCATTATGACCTGGATGGAACAGCATACAATATGGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460924.6
CDS-3UTR CAA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTTCCCATGTACCTTTaGAAAACTGGGAGCCGGTGC +
Preference number: 5 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTFPMYL*KTGSRC
Trigger: GCACCGGCTCCCAGTTTTCAAAAGGTACATGGGAAA...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357685.11
ENST00000361053.8
CDS-3UTR CAA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTCCCATGTACCTTTaGAAAACTGGGAGCCGGTGC +
Preference number: 5 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYFPMYL*KTGSRC
Trigger: GCACCGGCTCCCAGTTTTCAAAAGGTACATGGGAAA...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357685.11
ENST00000361053.8
CDS-3UTR CAA 90 bp AGCAATGCCTCCATTGGTCATGATGGTGTATTAAGGGTAAAACCGAAGCTTGTATCACTCTGTAGAAACTaGCTCCTGTATGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: SNASIGHDGVLRVKPKLVSLCRN*LLYVTV
Trigger: CACAGTGACATACAGGAGCAAGTTTCTACAGAGTGA...TACAAGCTTCGGTTTTACCCTTAATACACCATCATGACCAATGGAGGCATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CAA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTCACTCTGTAGAAACTaGCTCCTGTATGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTSLCRN*LLYVTV
Trigger: CACAGTGACATACAGGAGCAAGTTTCTACAGAGTGA...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp GACATTGGTTTGGGAGGTACGGTGCCCTTTATGCTCTGTCTTTTGTATAGAGTACGGTTTTTAGCACTGTaGGCCTTATATGTATCACTC +
Preference number: 5 (lower is better)
Translates to: DIGLGGTVPFMLCLLYRVRFLAL*ALYVSL
Trigger: GAGTGATACATATAAGGCCAACAGTGCTAAAAACCG...TACTCTATACAAAAGACAGAGCATAAAGGGCACCGTACCTCCCAAACCAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CAA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTCGTTCAAAAACATTCTaGCATGGATCCGGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: LESSVFISPVFMSKCTLIRSKTF*HGSGRA
Trigger: GGCTCTCCCGGATCCATGCAAGAATGTTTTTGAACG...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTCGTTCAAAAACATTCTaGCATGGATCCGGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFRSKTF*HGSGRA
Trigger: GGCTCTCCCGGATCCATGCAAGAATGTTTTTGAACG...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp ACATTGAGAGTGAAAGGATCTTGTTTCCTCACATCTACTCACAAGAGTAACCAACGTTCAAAAACATTCTaGCATGGATCCGGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: TLRVKGSCFLTSTHKSNQRSKTF*HGSGRA
Trigger: GGCTCTCCCGGATCCATGCAAGAATGTTTTTGAACG...TTGGTTACTCTTGTGAGTAGATGTGAGGAAACAAGATCCTTTCACTCTCAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp TATCCACAAGCATGTATGGACCCATTTATTACTCTGGGTTGGCATAGTGTGAATTTCACCACATCAACCTaGATCAGAGAATCCCCCACT +
Preference number: 5 (lower is better)
Translates to: YPQACMDPFITLGWHSVNFTTST*IRESPT
Trigger: AGTGGGGGATTCTCTGATCAAGGTTGATGTGGTGAA...ATTCACACTATGCCAACCCAGAGTAATAAATGGGTCCATACATGCTTGTGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp CCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTTGCTTTCATTCTGGTaGGGAGTGATCACCACAGAA +
Preference number: 5 (lower is better)
Translates to: PFGVLSVYFSSLYVQVHTLLSFW*GVITTE
Trigger: TTCTGTGGTGATCACTCCCAACCAGAATGAAAGCAA...AGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTCCAGACCTTGTGGTaGTCCCATCAGATGGGTATG +
Preference number: 5 (lower is better)
Translates to: LESSVFISPVFMSKCTLIFQTLW*SHQMGM
Trigger: CATACCCATCTGATGGGACAACCACAAGGTCTGGAA...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp CTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGTTCCAGACCTTGTGGTaGTCCCATCAGATGGGTATG +
Preference number: 5 (lower is better)
Translates to: LYVQVHTYFKPSFQTLWLFQTLW*SHQMGM
Trigger: CATACCCATCTGATGGGACAACCACAAGGTCTGGAA...CAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTCCTAGTTTCCAGACCTaGTGGTTGTCCCATCAGATG +
Preference number: 5 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPPSFQT*WLSHQM
Trigger: CATCTGATGGGACAACCACAAGGTCTGGAAACTAGG...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTCCTAGTTTCCAGACCTaGTGGTTGTCCCATCAGATG +
Preference number: 5 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFPSFQT*WLSHQM
Trigger: CATCTGATGGGACAACCACAAGGTCTGGAAACTAGG...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp CTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGCCTAGTTTCCAGACCTaGTGGTTGTCCCATCAGATG +
Preference number: 5 (lower is better)
Translates to: LYVQVHTYFKPSFQTLWLPSFQT*WLSHQM
Trigger: CATCTGATGGGACAACCACAAGGTCTGGAAACTAGG...CAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTATTTGGGACATTGGTTaGGGAGGTACGGTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPIWDIG*GGTVPF
Trigger: AAAGGGCACCGTACCTCCCAAACCAATGTCCCAAAT...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CAA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATATAGGCTCATTGCAGTaGGGTGCAGGCAGACAAAAG +
Preference number: 5 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYIGSLQ*GAGRQK
Trigger: CTTTTGTCTGCCTGCACCCAACTGCAATGAGCCTAT...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CAA 90 bp TACTATGTGGCTGGCATTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATATTTTCCCATGTACCTTTaGAAAACTAACTCATCCTTC +
Preference number: 5 (lower is better)
Translates to: YYVAGIVPGTGEDSSTLYFPMYL*KTNSSF
Trigger: GAAGGATGAGTTAGTTTTCAAAAGGTACATGGGAAA...ATATAGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAATGCCAGCCACATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp AAGAGCAAGAATTTGAGAGCACAAATAGGACCACGTGACAACAGTCCTTTGGACGAGAGTGAAAGGATCTaGTTTCCTCACATCTACTCA +
Preference number: 5 (lower is better)
Translates to: KSKNLRAQIGPRDNSPLDESERI*FPHIYS
Trigger: TGAGTAGATGTGAGGAAACAAGATCCTTTCACTCTC...GTCCAAAGGACTGTTGTCACGTGGTCCTATTTGTGCTCTCAAATTCTTGCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS TCA 90 bp AAGAGTTTTTCATCACCTTCAGTGTCTTATTCACCACATCAACCTTaGTCAGAGAATCCCCCACTAAATGCCGAAAGCCACAGCCATAAA +
Preference number: 5 (lower is better)
Translates to: KSFSSPSVSYSPHQP*SENPPLNAESHSHK
Trigger: TTTATGGCTGTGGCTTTCGGCATTTAGTGGGGGATTCTCTGATCAAGGTTGATGTGGTGAATAAGACACTGAAGGTGATGAAAAACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000494860.5
CDS-3UTR CAA 90 bp TATCCACAAGCATGTATGGACCCATTTATTACTCTGGGTTGGCATAGTGTGAATTCACTCTGTAGAAACTaGCTCCTGTATGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: YPQACMDPFITLGWHSVNSLCRN*LLYVTV
Trigger: CACAGTGACATACAGGAGCAAGTTTCTACAGAGTGA...ATTCACACTATGCCAACCCAGAGTAATAAATGGGTCCATACATGCTTGTGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTAAGGAGTTCCCCATATaGTATGCTGTTCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFKEFPI*YAVPSR
Trigger: CCTGGATGGAACAGCATACAATATGGGGAACTCCTT...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATAAGGAGTTCCCCATATaGTATGCTGTTCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYKEFPI*YAVPSR
Trigger: CCTGGATGGAACAGCATACAATATGGGGAACTCCTT...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTCTTCGAGGGAAAGATTaGGCTGCTGAATTATGGACC +
Preference number: 5 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFLRGKD*AAELWT
Trigger: GGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAAG...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp GTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTTCACCACATCAACCTaGATCAGAGAATCCCCCACT +
Preference number: 5 (lower is better)
Translates to: VFMSKCTLILNLVSRPCGFTTST*IRESPT
Trigger: AGTGGGGGATTCTCTGATCAAGGTTGATGTGGTGAA...ACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TATCCACAAGCATGTATGGACCCATTTATTACTCTGGGTTGGCATAGTGTGAATTTGCTTTCATTCTGGTaGGGAGTGATCACCACAGAA +
Preference number: 5 (lower is better)
Translates to: YPQACMDPFITLGWHSVNLLSFW*GVITTE
Trigger: TTCTGTGGTGATCACTCCCAACCAGAATGAAAGCAA...ATTCACACTATGCCAACCCAGAGTAATAAATGGGTCCATACATGCTTGTGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp CCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACAAGCTCTTCAAAGTTCTaGGCATCCAAAACTAGGATA +
Preference number: 5 (lower is better)
Translates to: PLLESSVFISPVFMSKCTSSSKF*ASKTRI
Trigger: TATCCTAGTTTTGGATGCCAAGAACTTTGAAGAGCT...TGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp CCCCCTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACCAGTTGCCATGTCATTaGCTTTATAAACACAGCATT +
Preference number: 5 (lower is better)
Translates to: PPFGVLSVYFSSLYVQVHQLPCH*LYKHSI
Trigger: AATGCTGTGTTTATAAAGCAAATGACATGGCAACTG...GTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TATCCACAAGCATGTATGGACCCATTTATTACTCTGGGTTGGCATAGTGTGAATGCCAGTGTAGACACATaGAGAGTGAAAGGATCTTGT +
Preference number: 5 (lower is better)
Translates to: YPQACMDPFITLGWHSVNASVDT*RVKGSC
Trigger: ACAAGATCCTTTCACTCTCAATGTGTCTACACTGGC...ATTCACACTATGCCAACCCAGAGTAATAAATGGGTCCATACATGCTTGTGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS TCA 90 bp TTATCTTATCTGTCTTGTATGATAAATGATACTACCAGTACTCCTTaGGTACAGGGTCTGGTGTTTGTCTCCTCTCTCCTTCCAGTACGT +
Preference number: 5 (lower is better)
Translates to: LSYLSCMINDTTSTP*VQGLVFVSSLLPVR
Trigger: ACGTACTGGAAGGAGAGAGGAGACAAACACCAGACCCTGTACTCAAGGAGTACTGGTAGTATCATTTATCATACAAGACAGATAAGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438022.5
ENST00000534122.5
CDS-3UTR CAA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATCGAAGTAGAGAGCCATaGAGCCACTTAGGAAAATGT +
Preference number: 5 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYRSREP*SHLGKC
Trigger: ACATTTTCCTAAGTGGCTCAATGGCTCTCTACTTCG...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CAA 90 bp CTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGTCACTCTGTAGAAACTaGCTCCTGTATGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: LYVQVHTYFKPSFQTLWLSLCRN*LLYVTV
Trigger: CACAGTGACATACAGGAGCAAGTTTCTACAGAGTGA...CAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTCACTCTGTAGAAACTaGCTCCTGTATGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWSLCRN*LLYVTV
Trigger: CACAGTGACATACAGGAGCAAGTTTCTACAGAGTGA...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TATCCACAAGCATGTATGGACCCATTTATTACTCTGGGTTGGCATAGTGTGAATCGGTTTTTAGCACTGTaGGCCTTATATGTATCACTC +
Preference number: 5 (lower is better)
Translates to: YPQACMDPFITLGWHSVNRFLAL*ALYVSL
Trigger: GAGTGATACATATAAGGCCAACAGTGCTAAAAACCG...ATTCACACTATGCCAACCCAGAGTAATAAATGGGTCCATACATGCTTGTGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp TATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGCGTTCAAAAACATTCTaGCATGGATCCGGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: YFSSLYVQVHTYFKPSFQRSKTF*HGSGRA
Trigger: GGCTCTCCCGGATCCATGCAAGAATGTTTTTGAACG...CTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCGTTCAAAAACATTCTaGCATGGATCCGGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SSVFISPVFMSKCTLILNRSKTF*HGSGRA
Trigger: GGCTCTCCCGGATCCATGCAAGAATGTTTTTGAACG...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp AGGGAAATTCTAAAGCCATTCTTATCCACAAGCATGTATGGACCCATTTATTACCTTCGAGGGAAAGATTaGGCTGCTGAATTATGGACC +
Preference number: 5 (lower is better)
Translates to: REILKPFLSTSMYGPIYYLRGKD*AAELWT
Trigger: GGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAAG...GTAATAAATGGGTCCATACATGCTTGTGGATAAGAATGGCTTTAGAATTTCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTGCTTTCATTCTGGTaGGGAGTGATCACCACAGAA +
Preference number: 5 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYLLSFW*GVITTE
Trigger: TTCTGTGGTGATCACTCCCAACCAGAATGAAAGCAA...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAATTCCAGACCTTGTGGTaGTCCCATCAGATGGGTATG +
Preference number: 5 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKFQTLW*SHQMGM
Trigger: CATACCCATCTGATGGGACAACCACAAGGTCTGGAA...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACTTCCAGACCTTGTGGTaGTCCCATCAGATGGGTATG +
Preference number: 5 (lower is better)
Translates to: SSVFISPVFMSKCTLILNFQTLW*SHQMGM
Trigger: CATACCCATCTGATGGGACAACCACAAGGTCTGGAA...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTaGTGGTTGTCCCATCAGATG +
Preference number: 5 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKPSFQT*WLSHQM
Trigger: CATCTGATGGGACAACCACAAGGTCTGGAAACTAGG...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAATGTCTATTTGGGACATaGGTTTGGGAGGTACGGTGC +
Preference number: 5 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKCLFGT*VWEVRC
Trigger: GCACCGTACCTCCCAAACCAATGTCCCAAATAGACA...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357685.11
CDS-3UTR CAA 90 bp GCTTGTTACATGAGTATATTGTGTGCTGCTGAGGTTTGGACTTCTAACGAACCCCAGTTGCCATGTCATTaGCTTTATAAACACAGCATT +
Preference number: 5 (lower is better)
Translates to: ACYMSILCAAEVWTSNEPQLPCH*LYKHSI
Trigger: AATGCTGTGTTTATAAAGCAAATGACATGGCAACTG...GGGTTCGTTAGAAGTCCAAACCTCAGCAGCACACAATATACTCATGTAACAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CAA 90 bp TTGTTCCAGGTACTGGAGAGGACAGCTCCACTCTATATGAGAAAAATCATCACTTCCTTCAAGATCCAGTaGCCATGTCATTTGCTTTAT +
Preference number: 5 (lower is better)
Translates to: LFQVLERTAPLYMRKIITSFKIQ*PCHLLY
Trigger: ATAAAGCAAATGACATGGCAACTGGATCTTGAAGGA...AGTGATGATTTTTCTCATATAGAGTGGAGCTGTCCTCTCCAGTACCTGGAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS TCA 90 bp TGCTCCATTCACAGCAATAAATTTGCTCCAATCTACCTGCAAATTTaGGACCACTGGAGATTTTTAATGGGCAGATCTCTATTCACATGC +
Preference number: 5 (lower is better)
Translates to: CSIHSNKFAPIYLQI*DHWRFLMGRSLFTC
Trigger: GCATGTGAATAGAGATCTGCCCATTAAAAATCTCCAGTGGTCTCAAATTTGCAGGTAGATTGGAGCAAATTTATTGCTGTGAATGGAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460924.6
CDS GCA 90 bp CATATTGTATGCTGTTCCATCCAGGTCATAATGAGGATGTGCAGTTaGTCCATTCACAGCAATAAATTTGCTCCAATCTACCTGCAAATT +
Preference number: 5 (lower is better)
Translates to: HIVCCSIQVIMRMCS*SIHSNKFAPIYLQI
Trigger: AATTTGCAGGTAGATTGGAGCAAATTTATTGCTGTGAATGGAGCAACTGCACATCCTCATTATGACCTGGATGGAACAGCATACAATATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460924.6
CDS-3UTR CAA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTCGGTTTTTAGCACTGTaGGCCTTATATGTATCACTC +
Preference number: 5 (lower is better)
Translates to: LESSVFISPVFMSKCTLIRFLAL*ALYVSL
Trigger: GAGTGATACATATAAGGCCAACAGTGCTAAAAACCG...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGCGGTTTTTAGCACTGTaGGCCTTATATGTATCACTC +
Preference number: 5 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWRFLAL*ALYVSL
Trigger: GAGTGATACATATAAGGCCAACAGTGCTAAAAACCG...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTCGGTTTTTAGCACTGTaGGCCTTATATGTATCACTC +
Preference number: 5 (lower is better)
Translates to: WSPQCLFLQSLCPSAHLFRFLAL*ALYVSL
Trigger: GAGTGATACATATAAGGCCAACAGTGCTAAAAACCG...AAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGAAGGAGTTCCCCATATaGTATGCTGTTCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: YFSSLYVQVHTYFKPSFQKEFPI*YAVPSR
Trigger: CCTGGATGGAACAGCATACAATATGGGGAACTCCTT...CTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTTCGAGGGAAAGATTaGGCTGCTGAATTATGGACC +
Preference number: 5 (lower is better)
Translates to: SSVFISPVFMSKCTLILNLRGKD*AAELWT
Trigger: GGTCCATAATTCAGCAGCCAAATCTTTCCCTCGAAG...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACTTCACCACATCAACCTaGATCAGAGAATCCCCCACT +
Preference number: 5 (lower is better)
Translates to: SSVFISPVFMSKCTLILNFTTST*IRESPT
Trigger: AGTGGGGGATTCTCTGATCAAGGTTGATGTGGTGAA...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000532593.5
CDS-3UTR CAA 90 bp CTTTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTTCCTTCAAGATCCAGTaGCCATGTCATTTGCTTTAT +
Preference number: 5 (lower is better)
Translates to: LLESSVFISPVFMSKCTLSFKIQ*PCHLLY
Trigger: ATAAAGCAAATGACATGGCAACTGGATCTTGAAGGA...AAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TTACTAAGGGAAATTCTAAAGCCATTCTTATCCACAAGCATGTATGGACCCATTCTTGGAAAAGTTTCCTaGTGGTTGTCCCATCAGATG +
Preference number: 5 (lower is better)
Translates to: LLREILKPFLSTSMYGPILGKVS*WLSHQM
Trigger: CATCTGATGGGACAACCACAAGGAAACTTTTCCAAG...AATGGGTCCATACATGCTTGTGGATAAGAATGGCTTTAGAATTTCCCTTAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp ATTAGCAATTCTTCTGCCAGTGTAGACACATTGAGAGTGAAAGGATCTTGTTTCGTGATGCCTCCAGCTTaGTTCTTTTTGCTTAGGATT +
Preference number: 5 (lower is better)
Translates to: ISNSSASVDTLRVKGSCFVMPPA*FFLLRI
Trigger: AATCCTAAGCAAAAAGAACAAAGCTGGAGGCATCAC...GAAACAAGATCCTTTCACTCTCAATGTGTCTACACTGGCAGAAGAATTGCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAATTGCTTTCATTCTGGTaGGGAGTGATCACCACAGAA +
Preference number: 5 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKLLSFW*GVITTE
Trigger: TTCTGTGGTGATCACTCCCAACCAGAATGAAAGCAA...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTAGCTCTTCAAAGTTCTaGGCATCCAAAACTAGGATA +
Preference number: 5 (lower is better)
Translates to: LESSVFISPVFMSKCTLISSSKF*ASKTRI
Trigger: TATCCTAGTTTTGGATGCCAAGAACTTTGAAGAGCT...AATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCAGCTCTTCAAAGTTCTaGGCATCCAAAACTAGGATA +
Preference number: 5 (lower is better)
Translates to: FSSLYVQVHTYFKPSFQTSSSKF*ASKTRI
Trigger: TATCCTAGTTTTGGATGCCAAGAACTTTGAAGAGCT...GGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp ATTAGCAATTCTTCTGCCAGTGTAGACACATTGAGAGTGAAAGGATCTTGTTTCAGCTCTTCAAAGTTCTaGGCATCCAAAACTAGGATA +
Preference number: 5 (lower is better)
Translates to: ISNSSASVDTLRVKGSCFSSSKF*ASKTRI
Trigger: TATCCTAGTTTTGGATGCCAAGAACTTTGAAGAGCT...GAAACAAGATCCTTTCACTCTCAATGTGTCTACACTGGCAGAAGAATTGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATAGCTCTTCAAAGTTCTaGGCATCCAAAACTAGGATA +
Preference number: 5 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYSSSKF*ASKTRI
Trigger: TATCCTAGTTTTGGATGCCAAGAACTTTGAAGAGCT...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TTTGGAGTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTCCTTCAAGATCCAGTaGCCATGTCATTTGCTTTAT +
Preference number: 5 (lower is better)
Translates to: FGVLSVYFSSLYVQVHTYSFKIQ*PCHLLY
Trigger: ATAAAGCAAATGACATGGCAACTGGATCTTGAAGGA...ATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGACTCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp AGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTCCTTCAAGATCCAGTaGCCATGTCATTTGCTTTAT +
Preference number: 5 (lower is better)
Translates to: SLYVQVHTYFKPSFQTLWSFKIQ*PCHLLY
Trigger: ATAAAGCAAATGACATGGCAACTGGATCTTGAAGGA...CCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp TCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTTTCCCATGTACCTTTaGAAAACTAACTCATCCTTC +
Preference number: 5 (lower is better)
Translates to: SPVFMSKCTLILNLVSRPFPMYL*KTNSSF
Trigger: GAAGGATGAGTTAGTTTTCAAAAGGTACATGGGAAA...AGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CAA 90 bp CTTTATGTCCAAGTGCACACTTATTTTAAACCTAGTTTCCAGACCTTGTGGTTGTTTCCCATGTACCTTTaGAAAACTAACTCATCCTTC +
Preference number: 5 (lower is better)
Translates to: LYVQVHTYFKPSFQTLWLFPMYL*KTNSSF
Trigger: GAAGGATGAGTTAGTTTTCAAAAGGTACATGGGAAA...CAACCACAAGGTCTGGAAACTAGGTTTAAAATAAGTGTGCACTTGGACATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438022.5
ENST00000526088.5
CDS-3UTR CAA 90 bp ATTAGCAATTCTTCTGCCAGTGTAGACACATTGAGAGTGAAAGGATCTTGTTTCCCAGCTTTGTTCTTTTaGCTTAGGATTAATACCGTT +
Preference number: 5 (lower is better)
Translates to: ISNSSASVDTLRVKGSCFPALFF*LRINTV
Trigger: AACGGTATTAATCCTAAGCAAAAAGAACAAAGCTGG...GAAACAAGATCCTTTCACTCTCAATGTGTCTACACTGGCAGAAGAATTGCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp ATTAGCAATTCTTCTGCCAGTGTAGACACATTGAGAGTGAAAGGATCTTGTTTCCTCTGTTGTGTTCCATaGGTGTATATATCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: ISNSSASVDTLRVKGSCFLCCVP*VYISVL
Trigger: CAAAACAGATATATACACCAATGGAACACAACAGAG...GAAACAAGATCCTTTCACTCTCAATGTGTCTACACTGGCAGAAGAATTGCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp TCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACAGCTCTTCAAAGTTCTaGGCATCCAAAACTAGGATA +
Preference number: 5 (lower is better)
Translates to: SSVFISPVFMSKCTLILNSSSKF*ASKTRI
Trigger: TATCCTAGTTTTGGATGCCAAGAACTTTGAAGAGCT...GTTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000525175.1
ENST00000526088.5
ENST00000532593.5
CDS-3UTR CAA 90 bp GTTCCATTGGTGTATATATCTGTTTTGGTACCCATACCATGCTGTTTTTGTTACCAGTTGCCATGTCATTaGCTTTATAAACACAGCATT +
Preference number: 5 (lower is better)
Translates to: VPLVYISVLVPIPCCFCYQLPCH*LYKHSI
Trigger: AATGCTGTGTTTATAAAGCAAATGACATGGCAACTG...GTAACAAAAACAGCATGGTATGGGTACCAAAACAGATATATACACCAATGGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS-3UTR CAA 90 bp GTCCTCAGTGTTTATTTCTCCAGTCTTTATGTCCAAGTGCACACTTATTTTAAACAGTTGCCATGTCATTaGCTTTATAAACACAGCATT +
Preference number: 5 (lower is better)
Translates to: VLSVYFSSLYVQVHTYFKQLPCH*LYKHSI
Trigger: AATGCTGTGTTTATAAAGCAAATGACATGGCAACTG...TTTAAAATAAGTGTGCACTTGGACATAAAGACTGGAGAAATAAACACTGAGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
CDS CCA 72 bp CTCGAGCAGAGATGCCCCGTGGAGCCTCTTCCACTGTaGTCAGCAGCGGTGCAACACATGGCAGACCCCGAC +
Preference number: 6 (lower is better)
Translates to: LEQRCPVEPLPL*SAAVQHMADPD
Trigger: GTCGGGGTCTGCCATGTGTTGCACCGCTGCTGACCACAGTGGAAGAGGCTCCACGGGGCATCTCTGCTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000461480.1
ENST00000526088.5
ENST00000531003.1
ENST00000531169.5
ENST00000532612.5
ENST00000534122.5
CDS TCA 72 bp CCTGGAAGGAGCTGTCCAGTGCGTTTTTCCACCACATaGAACCGCGTATTACACTGGGGTTCCCAGCTTATC +
Preference number: 6 (lower is better)
Translates to: PGRSCPVRFSTT*NRVLHWGSQLI
Trigger: GATAAGCTGGGAACCCCAGTGTAATACGCGGTTTCATGTGGTGGAAAAACGCACTGGACAGCTCCTTCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000494860.5
ENST00000526088.5
ENST00000527198.1
ENST00000531169.5
ENST00000532593.5
CDS CAA 90 bp TTCCCAAACTCGAATTTCCCAGGTCCAATTCGAAGTAGAGAGCCATaGAGCCACTTAGGAAAATGTCCCCAGACTCGAGCAGAGATGCCC +
Preference number: 6 (lower is better)
Translates to: FPNSNFPGPIRSREP*SHLGKCPQTRAEMP
Trigger: GGGCATCTCTGCTCGAGTCTGGGGACATTTTCCTAAGTGGCTCAATGGCTCTCTACTTCGAATTGGACCTGGGAAATTCGAGTTTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000461480.1
ENST00000526088.5
ENST00000531003.1
ENST00000531169.5
ENST00000532612.5
ENST00000534122.5
CDS TCA 72 bp ACTTGCTCCTGTATGTCACTGTGCCCTTTGCCATTCTaGACTGGTGAAGCAGCGCCATCCCATCAAACCAAT +
Preference number: 6 (lower is better)
Translates to: TCSCMSLCPLPF*TGEAAPSHQTN
Trigger: ATTGGTTTGATGGGATGGCGCTGCTTCACCAGTTCAGAATGGCAAAGGGCACAGTGACATACAGGAGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000494860.5
ENST00000526088.5
ENST00000527939.1
ENST00000530677.1
ENST00000531169.5
ENST00000532593.5
ENST00000532612.5
ENST00000534122.5
ENST00000534550.5
CDS CCA 72 bp AGCACCAGATCGTTCCATCAGCCTGTTTCACAGCACTaGCTGAAGTATAGGACAATGGACTCAGGTTGTCTC +
Preference number: 6 (lower is better)
Translates to: STRSFHQPVSQH*LKYRTMDSGCL
Trigger: GAGACAACCTGAGTCCATTGTCCTATACTTCAGCCAGTGCTGTGAAACAGGCTGATGGAACGATCTGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000494860.5
ENST00000526088.5
ENST00000530677.1
ENST00000531169.5
ENST00000532593.5
CDS CAA 72 bp TCGAATTTCCCAGGTCCAATTCGAAGTAGAGAGCCATaGAGCCACTTAGGAAAATGTCCCCAGACTCGAGCA +
Preference number: 6 (lower is better)
Translates to: SNFPGPIRSREP*SHLGKCPQTRA
Trigger: TGCTCGAGTCTGGGGACATTTTCCTAAGTGGCTCAATGGCTCTCTACTTCGAATTGGACCTGGGAAATTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000461480.1
ENST00000526088.5
ENST00000531003.1
ENST00000531169.5
ENST00000532612.5
ENST00000534122.5
CDS TCA 72 bp GAAAAGTTTCCTTGTGGTTGTCCCATCAGATGGGTATaGAGGTACCATGGAACCCATAAGGCATCTGCACAG +
Preference number: 6 (lower is better)
Translates to: EKFPCGCPIRWV*RYHGTHKASAQ
Trigger: CTGTGCAGATGCCTTATGGGTTCCATGGTACCTTCATACCCATCTGATGGGACAACCACAAGGAAACTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531169.5
CDS CAA 72 bp AACTCAGCCTTCTTTAACTTCCAGGACTCTGCGGAATaGCTATCTCATCTGAGCCACACAGGACACAAAGCT +
Preference number: 6 (lower is better)
Translates to: NSAFFNFQDSAE*LSHLSHTGHKA
Trigger: AGCTTTGTGTCCTGTGTGGCTCAGATGAGATAGCAATTCCGCAGAGTCCTGGAAGTTAAAGAAGGCTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438022.5
ENST00000534122.5
CDS CAA 90 bp AACAATCCTAACTCAGCCTTCTTTAACTTCCAGGACTCTGCGGAATaGCTATCTCATCTGAGCCACACAGGACACAAAGCTTCAGAAGCT +
Preference number: 6 (lower is better)
Translates to: NNPNSAFFNFQDSAE*LSHLSHTGHKASEA
Trigger: AGCTTCTGAAGCTTTGTGTCCTGTGTGGCTCAGATGAGATAGCAATTCCGCAGAGTCCTGGAAGTTAAAGAAGGCTGAGTTAGGATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438022.5
ENST00000534122.5
CDS TCA 72 bp ATGGACTCAGGTTGTCTCCCTCAGGGGCATTCAAACTaGCATTTAAAGGCAAAACAAACCTTCGAGGGAAAG +
Preference number: 6 (lower is better)
Translates to: MDSGCLPQGHSN*HLKAKQTFEGK
Trigger: CTTTCCCTCGAAGGTTTGTTTTGCCTTTAAATGTCAGTTTGAATGCCCCTGAGGGAGACAACCTGAGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000494860.5
ENST00000526088.5
ENST00000530677.1
ENST00000531169.5
ENST00000532593.5
CDS TCA 72 bp TCCAAACCTTCAGTGTCTTATTCACCACATCAACCTTaGTCAGAGAATCCCCCACTAAATGCCGAAAGCCAC +
Preference number: 6 (lower is better)
Translates to: SKPSVSYSPHQP*SENPPLNAESH
Trigger: GTGGCTTTCGGCATTTAGTGGGGGATTCTCTGATCAAGGTTGATGTGGTGAATAAGACACTGAAGGTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000531169.5
ENST00000532593.5
ENST00000532716.1
CDS TCA 72 bp TCATCACCTTCAGTGTCTTATTCACCACATCAACCTTaGTCAGAGAATCCCCCACTAAATGCCGAAAGCCAC +
Preference number: 6 (lower is better)
Translates to: SSPSVSYSPHQP*SENPPLNAESH
Trigger: GTGGCTTTCGGCATTTAGTGGGGGATTCTCTGATCAAGGTTGATGTGGTGAATAAGACACTGAAGGTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494860.5
CDS TCA 72 bp GAGTTGTCTGAAATGTGCCAGTTATGGGGACTTGTCTaGATGCCTGGACACGTTACTGATGCCCTAAACAAA +
Preference number: 6 (lower is better)
Translates to: ELSEMCQLWGLV*MPGHVTDALNK
Trigger: TTTGTTTAGGGCATCAGTAACGTGTCCAGGCATTCAGACAAGTCCCCATAACTGGCACATTTCAGACAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527198.1
CDS CAA 72 bp GCACTGTTGGCCTTATATGTATCACTCTGTAGAAACTaGCTCCTGTATGTCACTGTGCCCTTTGCCATTCTG +
Preference number: 6 (lower is better)
Translates to: ALLALYVSLCRN*LLYVTVPFAIL
Trigger: CAGAATGGCAAAGGGCACAGTGACATACAGGAGCAAGTTTCTACAGAGTGATACATATAAGGCCAACAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000494860.5
ENST00000526088.5
ENST00000527939.1
ENST00000530677.1
ENST00000531169.5
ENST00000532593.5
ENST00000532612.5
ENST00000534122.5
ENST00000534550.5
CDS TCA 72 bp CTGTCTTGTATGATAAATGATACTACCAGTACTCCTTaGGTACAGGGTCTGGTGTTTGTCTCCTCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: LSCMINDTTSTP*VQGLVFVSSLL
Trigger: AAGGAGAGAGGAGACAAACACCAGACCCTGTACTCAAGGAGTACTGGTAGTATCATTTATCATACAAGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438022.5
ENST00000534122.5
CDS CAA 72 bp GTCACCACACTGACAGCTTCTGACACCTCTCTTCTTTaGGTACAAACCACAGAGGGCTTCAAATTTACAATA +
Preference number: 6 (lower is better)
Translates to: VTTLTASDTSLL*VQTTEGFKFTI
Trigger: TATTGTAAATTTGAAGCCCTCTGTGGTTTGTACCAAAAGAAGAGAGGTGTCAGAAGCTGTCAGTGTGGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461480.1
CDS CAA 90 bp GCCAGTGTGCCAAATTCTGAGATCACAATTCGGTTTTTAGCACTGTaGGCCTTATATGTATCACTCTGTAGAAACTTGCTCCTGTATGTC +
Preference number: 6 (lower is better)
Translates to: ASVPNSEITIRFLAL*ALYVSLCRNLLLYV
Trigger: GACATACAGGAGCAAGTTTCTACAGAGTGATACATATAAGGCCAACAGTGCTAAAAACCGAATTGTGATCTCAGAATTTGGCACACTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000494860.5
ENST00000526088.5
ENST00000527939.1
ENST00000530677.1
ENST00000531169.5
ENST00000532593.5
ENST00000532612.5
ENST00000534122.5
ENST00000534550.5
CDS GCA 72 bp CTAACTCATCCTTCAAGATCCAGTTGCCATGTCATTTaGTTTATAAACACAGCATTCCCCTTACCTACAGCA +
Preference number: 6 (lower is better)
Translates to: LTHPSRSSCHVI*FINTAFPLPTA
Trigger: TGCTGTAGGTAAGGGGAATGCTGTGTTTATAAAGCAAATGACATGGCAACTGGATCTTGAAGGATGAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000438022.5
ENST00000526088.5
ENST00000532593.5
ENST00000534122.5
CDS CAA 90 bp CCCATCAAACCAATGATTGTACCTAACTCATCCTTCAAGATCCAGTaGCCATGTCATTTGCTTTATAAACACAGCATTCCCCTTACCTAC +
Preference number: 6 (lower is better)
Translates to: PIKPMIVPNSSFKIQ*PCHLLYKHSIPLTY
Trigger: GTAGGTAAGGGGAATGCTGTGTTTATAAAGCAAATGACATGGCAACTGGATCTTGAAGGATGAGTTAGGTACAATCATTGGTTTGATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532593.5
CDS CAA 90 bp GCACAAATCAATTATAACACAGCCCTGGTCCTCAAAGGCATTGATTaGATGAAATGTAACAAAAGGTTTGCTGTAGTATCTCCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: AQINYNTALVLKGID*MKCNKRFAVVSPWK
Trigger: CTTCCAGGGAGATACTACAGCAAACCTTTTGTTACATTTCATCAAATCAATGCCTTTGAGGACCAGGGCTGTGTTATAATTGATTTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000494860.5
ENST00000526088.5
ENST00000527198.1
ENST00000530677.1
ENST00000531169.5
ENST00000532593.5
CDS TCA 72 bp AATATTCCAAAAGTAAAAGAATCAGGCCTACTGAGTTaGATATGGGAGAAAGAGAGGGAGTCTTTGCAGTCC +
Preference number: 6 (lower is better)
Translates to: NIPKVKESGLLS*IWEKERESLQS
Trigger: GGACTGCAAAGACTCCCTCTCTTTCTCCCATATTCAACTCAGTAGGCCTGATTCTTTTACTTTTGGAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494860.5
CDS CAA 72 bp CCAATGATTGTACCTAACTCATCCTTCAAGATCCAGTaGCCATGTCATTTGCTTTATAAACACAGCATTCCC +
Preference number: 6 (lower is better)
Translates to: PMIVPNSSFKIQ*PCHLLYKHSIP
Trigger: GGGAATGCTGTGTTTATAAAGCAAATGACATGGCAACTGGATCTTGAAGGATGAGTTAGGTACAATCATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532593.5
CDS TCA 72 bp CACAGCAATAAATTTGCTCCAATCTACCTGCAAATTTaGGACCACTGGAGATTTTTAATGGGCAGATCTCTA +
Preference number: 6 (lower is better)
Translates to: HSNKFAPIYLQI*DHWRFLMGRSL
Trigger: TAGAGATCTGCCCATTAAAAATCTCCAGTGGTCTCAAATTTGCAGGTAGATTGGAGCAAATTTATTGCTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460924.6
CDS CAA 90 bp GTCCCAGATTCCATCACCATCAAACACAATTTGTGTAACTATAATTaGCCATCAACTTTAAATATAGGTGTCCTAACAACCCTAACCCCA +
Preference number: 6 (lower is better)
Translates to: VPDSITIKHNLCNYN*PSTLNIGVLTTLTP
Trigger: TGGGGTTAGGGTTGTTAGGACACCTATATTTAAAGTTGATGGCAAATTATAGTTACACAAATTGTGTTTGATGGTGATGGAATCTGGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494860.5
CDS TCA 72 bp AGCCACAGCCATAAAAGAAATGATACTTTTTGCCACTaGATCGATCATAGTAGATCTGAGGAAATTCAATGC +
Preference number: 6 (lower is better)
Translates to: SHSHKRNDTFCH*IDHSRSEEIQC
Trigger: GCATTGAATTTCCTCAGATCTACTATGATCGATTCAGTGGCAAAAAGTATCATTTCTTTTATGGCTGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000494860.5
ENST00000526088.5
ENST00000530677.1
ENST00000531169.5
ENST00000532593.5
ENST00000532716.1
CDS CAA 72 bp TACCTTTTGAAAACTAACTCATCCTTCAAGATCCAGTaGCCATGTCATTTGCTTTATAAACACAGCATTCCC +
Preference number: 6 (lower is better)
Translates to: YLLKTNSSFKIQ*PCHLLYKHSIP
Trigger: GGGAATGCTGTGTTTATAAAGCAAATGACATGGCAACTGGATCTTGAAGGATGAGTTAGTTTTCAAAAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000438022.5
ENST00000526088.5
ENST00000531169.5
ENST00000534122.5
CDS CAA 72 bp AATTATAACACAGCCCTGGTCCTCAAAGGCATTGATTaGATGAAATGTAACAAAAGGTTTGCTGTAGTATCT +
Preference number: 6 (lower is better)
Translates to: NYNTALVLKGID*MKCNKRFAVVS
Trigger: AGATACTACAGCAAACCTTTTGTTACATTTCATCAAATCAATGCCTTTGAGGACCAGGGCTGTGTTATAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000357685.11
ENST00000361053.8
ENST00000438022.5
ENST00000460924.6
ENST00000494860.5
ENST00000526088.5
ENST00000527198.1
ENST00000530677.1
ENST00000531169.5
ENST00000532593.5