RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCL9 (Homo sapiens)

Ensembl gene IDs: ENSG00000116128

Ensembl transcript IDs: ENST00000234739.8, ENST00000497938.1, ENST00000683836.1, ENST00000684121.1

Found 417 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCCCTCCCCCAAAGCAGCCCTCGGGTCTCTGTTCTCCTATTGCATaGCCAATAGTAAGTACTCCTGGAACTCCCTCAAAGCAGCTCTCA +
Preference number: 1 (lower is better)
Translates to: PPPPKQPSGLCSPIA*PIVSTPGTPSKQLS
Trigger: TGAGAGCTGCTTTGAGGGAGTTCCAGGAGTACTTACTATTGGTCATGCAATAGGAGAACAGAGACCCGAGGGCTGCTTTGGGGGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR CCA 90 bp CTCGGGTCTCTGTTCTCCTATTGCATGACCAATAGTAAGTACTCCTaGAACTCCCTCAAAGCAGCTCTCAGGACCTGGAATCTCATCTTG +
Preference number: 1 (lower is better)
Translates to: LGSLFSYCMTNSKYS*NSLKAALRTWNLIL
Trigger: CAAGATGAGATTCCAGGTCCTGAGAGCTGCTTTGAGGGAGTTCCAGGAGTACTTACTATTGGTCATGCAATAGGAGAACAGAGACCCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR CCA 90 bp TCCAAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATaGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCC +
Preference number: 1 (lower is better)
Translates to: SKGRKHTENGATHDR*QFSKHSYRFPKVGA
Trigger: GGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR-3UTR TCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCCCTGGAATCTCATCTTaGCAAGGATCGGCACATCCC +
Preference number: 2 (lower is better)
Translates to: QSQEDARHGRRGFARFISPGISS*QGSAHP
Trigger: GGGATGTGCCGATCCTTGTCAAGATGAGATTCCAGG...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR CAA 90 bp TTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTaGCTAGATTTATTTCCCCAAAATAACACTGTGTATTGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: FPLRAKRTLGMEGEA*LDLFPQNNTVYCSC
Trigger: GCAGCTGCAATACACAGTGTTATTTTGGGGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCAATAGTAAGTACTCCTaGAACTCCCTCAAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: QSQEDARHGRRGFARFISNSKYS*NSLKAA
Trigger: AGCTGCTTTGAGGGAGTTCCAGGAGTACTTACTATT...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCAGAAAAATGTGCCAGTaGGTTGGTATATTGGGAGAC +
Preference number: 2 (lower is better)
Translates to: QSQEDARHGRRGFARFISRKMCQ*VGILGD
Trigger: GTCTCCCAATATACCAACCCACTGGCACATTTTTCT...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTGCAGCTCTCAGGACCTaGAATCTCATCTTGACAAGG +
Preference number: 2 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGAALRT*NLILTR
Trigger: CCTTGTCAAGATGAGATTCCAGGTCCTGAGAGCTGC...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR-3UTR TCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCGAACGGTGCAACACATaGCCGATGGCAATTCTCAAA +
Preference number: 2 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCERCNT*PMAILK
Trigger: TTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTC...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR-3UTR TCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCATTAATACTCTGCTCTaGGGTCGTAGTTTGGTTTTT +
Preference number: 2 (lower is better)
Translates to: QSQEDARHGRRGFARFISINTLL*GRSLVF
Trigger: AAAAACCAAACTACGACCTCAGAGCAGAGTATTAAT...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR-3UTR TCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTGTTCTCCTATTGCATaGCCAATAGTAAGTACTCCT +
Preference number: 2 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSCSPIA*PIVSTP
Trigger: AGGAGTACTTACTATTGGTCATGCAATAGGAGAACA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR-3UTR TCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAGTAGGTGCCATCATTaGTACCCAAGTCCACAAAAA +
Preference number: 2 (lower is better)
Translates to: KGRKHTENGATHDRWQFSSRCHH*YPSPQK
Trigger: TTTTTGTGGACTTGGGTATCAATGATGGCACCTACT...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR-3UTR GCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCATCTCTGTTCTCCTATTaGATGACCAATAGTAAGTAC +
Preference number: 2 (lower is better)
Translates to: KGRKHTENGATHDRWQFSSLFSY*MTNSKY
Trigger: GTACTTACTATTGGTCATGCAATAGGAGAACAGAGA...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR-3UTR CAA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGAAATGTGCCAGTGGGTaGGTATATTGGGAGACAAGA +
Preference number: 3 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARKCASG*VYWETR
Trigger: TCTTGTCTCCCAATATACCAACCCACTGGCACATTT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR GCA 72 bp TCCCCCAAAGCAGCCCTCGGGTCTCTGTTCTCCTATTaGATGACCAATAGTAAGTACTCCTGGAACTCCCTC +
Preference number: 3 (lower is better)
Translates to: SPKAALGSLFSY*MTNSKYSWNSL
Trigger: GAGGGAGTTCCAGGAGTACTTACTATTGGTCATGCAATAGGAGAACAGAGACCCGAGGGCTGCTTTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR-3UTR CAA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAACCTGGAATCTCATCTaGACAAGGATCGGCACATCC +
Preference number: 3 (lower is better)
Translates to: KGRKHTENGATHDRWQFSTWNLI*TRIGTS
Trigger: GGATGTGCCGATCCTTGTCAAGATGAGATTCCAGGT...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR CCA 72 bp CTGTTCTCCTATTGCATGACCAATAGTAAGTACTCCTaGAACTCCCTCAAAGCAGCTCTCAGGACCTGGAAT +
Preference number: 3 (lower is better)
Translates to: LFSYCMTNSKYS*NSLKAALRTWN
Trigger: ATTCCAGGTCCTGAGAGCTGCTTTGAGGGAGTTCCAGGAGTACTTACTATTGGTCATGCAATAGGAGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
3UTR CCA 72 bp CGTAAACATACAGAGAACGGTGCAACACATGACCGATaGCAATTCTCAAAGCACAGCTACAGATTCCCAAAA +
Preference number: 3 (lower is better)
Translates to: RKHTENGATHDR*QFSKHSYRFPK
Trigger: TTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTGGGCCCGCCAGCATaGCTGCCAGCTGCGATGGAG +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARLGPPA*LPAAME
Trigger: CTCCATCGCAGCTGGCAGGCATGCTGGCGGGCCCAG...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGGCCCGCCAGCATGCCTaGCAGCTGCGATGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARARQHA*QLRWSL
Trigger: CAGACTCCATCGCAGCTGGCAGGCATGCTGGCGGGC...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGTGTTCCCCAGGACAGTaGAGGAGTCAGGACCCCCGG +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARCSPGQ*RSQDPR
Trigger: CCGGGGGTCCTGACTCCTTCACTGTCCTGGGGAACA...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGTGGCCCACTGCTTGCTaGGTGCGTCCCTTAGCGCTC +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARWPTAC*VRPLAL
Trigger: GAGCGCTAAGGGACGCACCCAGCAAGCAGTGGGCCA...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGGGGCCCAGTACCATCTaGGGGCAGTGGAGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARGPSTI*GQWSGA
Trigger: AGCTCCACTCCACTGCCCCCAGATGGTACTGGGCCC...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGACTGGAGGGAAGCCCTaGGGGAAGCCCATCCGTCCT +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARTGGKP*GKPIRP
Trigger: AGGACGGATGGGCTTCCCCCAGGGCTTCCCTCCAGT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGACCATCTGGGGGCAGTaGAGTGGAGCTGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARTIWGQ*SGAGRT
Trigger: AGTCCTGCCAGCTCCACTCCACTGCCCCCAGATGGT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGAGGCTGGTGGTCTCATaGGGTTGTGGCCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARRLVVS*GCGLAW
Trigger: CCATGCCAGGCCACAACCCCATGAGACCACCAGCCT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTGAGGTGGACAGGTaGAGCAGCAGCAGACCCCAA +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARLEVDR*SSSRPQ
Trigger: TTGGGGTCTGCTGCTGCTTCACCTGTCCACCTCAAG...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGTGGGTGCGTGCCTCCTaGTGCCAGAGGAAAATCTCG +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARWVRAS*CQRKIS
Trigger: CGAGATTTTCCTCTGGCAGCAGGAGGCACGCACCCA...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTGGGGGTTTCCAGATaGGGACATCACTGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARLGVSR*GHHCRG
Trigger: CCCCCTACAGTGATGTCCCCATCTGGAAACCCCCAG...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCCCACGTCAGCAGCCATaGCCCGGGGCCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISPRQQP*PGASSV
Trigger: CACAGATGAGGCCCCGGGGCATGGCTGCTGACGTGG...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACCCGGTCCAGGGGACGTaGGGGTGCGGCAGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYPVQGT*GCGRLG
Trigger: CCCAAGCCTGCCGCACCCCCACGTCCCCTGGACCGG...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCGTCCGGAGTTCCCACTaGCCCTGGACCTCCCATGCC +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISVRSSH*PWTSHA
Trigger: GGCATGGGAGGTCCAGGGCCAGTGGGAACTCCGGAC...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGGGTTGTGGCCTGGCATaGATGGAGCTGTACCAAGAG +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARGCGLA*MELYQE
Trigger: CTCTTGGTACAGCTCCATCCATGCCAGGCCACAACC...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCCTATTGTTGGGAGTTaGGTTGGGCCCAGTACCATC +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARPIVGS*VGPSTI
Trigger: GATGGTACTGGGCCCAACTCAACTCCCAACAATAGG...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCGTGGCACTGGCCCACTaGTTGCTGGGTGCGTCCCTT +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISVALAH*LLGASL
Trigger: AAGGGACGCACCCAGCAAGCAGTGGGCCAGTGCCAC...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGAATACCCCAGGATTCTaGTGCGGTCCCCCACTTTGT +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARNTPGF*CGPPLC
Trigger: ACAAAGTGGGGGACCGCAGCAGAATCCTGGGGTATT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCAGAGGGCCCTCAACTaGTATTCGAGGGAAAATGGG +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARQRALN*YSRENG
Trigger: CCCATTTTCCCTCGAATACCAGTTGAGGGCCCTCTG...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCCCAGGTCCAGGACCCTaGGGCTGTTTACGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISPGPGP*GCLRPG
Trigger: TCCAGGCCGTAAACAGCCCCAGGGTCCTGGACCTGG...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGATGCTAGTCCCATTCTaGGGGCTTGTTCGCCCATCA +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARMLVPF*GLVRPS
Trigger: TGATGGGCGAACAAGCCCCCAGAATGGGACTAGCAT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCGCCCCAGGCCGCGCTaGACTGGAGGAGCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIRPRPR*TGGAVL
Trigger: CAACACAGCTCCTCCAGTTCAGCGCGGCCTGGGGCG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCCCCATTGGGACCCCATaGGGAGGTATGTTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISPIGTP*GGMLGP
Trigger: GGGACCCAACATACCTCCTCATGGGGTCCCAATGGG...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGACCCAGCTGTTTCTCTaGCAGCTGCTGCTGAAACAT +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARTQLFL*QLLLKH
Trigger: ATGTTTCAGCAGCAGCTGGCAGAGAAACAGCTGGGT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGAATTTGGAATCCAGCTaGGGGTTTCCAGATGGGGAC +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARNLESS*GFPDGD
Trigger: GTCCCCATCTGGAAACCCCCAGCTGGATTCCAAATT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACGGGGTGCGGCAGGCTTaGGTGCTGGTGCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYGVRQA*VLVPEW
Trigger: CCATTCCGGCACCAGCACCCAAGCCTGCCGCACCCC...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCCTGGCATGTTGGGGTaGGGAGCCATGCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSPGMLG*GAMPLG
Trigger: CCCGAGGGGCATGGCTCCCCACCCCAACATGCCAGG...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCCCCGAGGCCCGTGCTaGTGGACCATCATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIPRGPC*WTIMSW
Trigger: CCAGGACATGATGGTCCATCAGCACGGGCCTCGGGG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCTCGGCCAGGACCGCTaGAAATGCCCTGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAILGQDR*KCPGQE
Trigger: CTCCTGGCCAGGGCATTTTCAGCGGTCCTGGCCGAG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCCCACTGGGGCCATTGTaGGGGAATGGAACCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISPLGPL*GNGTCC
Trigger: ACAGCAGGTTCCATTCCCTCACAATGGCCCCAGTGG...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTGGGGGCAGTGGCACTaGCCCACTGCTTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIWGQWH*PTACWV
Trigger: CACCCAGCAAGCAGTGGGCCAGTGCCACTGCCCCCA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCGCCACTGGACACTGGTaGAGGCGGAGGGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSATGHW*RRRGFG
Trigger: CCCAAAGCCCCTCCGCCTCCACCAGTGTCCAGTGGC...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCTCCTTGAGGGCCAAATaGAGCTCCCACGTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISSLRAK*SSHVCP
Trigger: CGGACAGACGTGGGAGCTCCATTTGGCCCTCAAGGA...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCGGCTCCCTGGCATGTTaGGGTGGGGAGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCGSLAC*GGEPCP
Trigger: GGGGCATGGCTCCCCACCCCAACATGCCAGGGAGCC...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCCAGGGAGGCGCATCTaGCTCCCTGGCATGTTGGGG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIPGRRI*LPGMLG
Trigger: CCCCAACATGCCAGGGAGCCAGATGCGCCTCCCTGG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTGGAAGCAGCAGCAGCTaGGCCCGCCAGCATGCCTGC +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGGSSSS*ARQHAC
Trigger: GCAGGCATGCTGGCGGGCCCAGCTGCTGCTGCTTCC...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGATAACGGGGTGGAACTaGGCATTGCAAACTTGGACA +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARITGWN*ALQTWT
Trigger: TGTCCAAGTTTGCAATGCCCAGTTCCACCCCGTTAT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCATGGTATAACGGGGTaGAACTGGGCATTGCAAACT +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARHGITG*NWALQT
Trigger: AGTTTGCAATGCCCAGTTCCACCCCGTTATACCATG...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCCTGGGTCATTCCCATTaGGCTGAGGGTTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISLGHSH*AEGWHR
Trigger: CCGATGCCAACCCTCAGCCCAATGGGAATGACCCAG...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACTTTGGGGCAGGTTGCTaGGGCGGCCAAGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYFGAGC*GGQGGL
Trigger: AAGGCCCCCTTGGCCGCCCCAGCAACCTGCCCCAAA...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCGGTCTCATGGGGTTGTaGCCTGGCATGGATGGAGCT +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISGLMGL*PGMDGA
Trigger: AGCTCCATCCATGCCAGGCCACAACCCCATGAGACC...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCGGGATCCCAGGACTCTaGAGGGGAGGTTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISGIPGL*RGGFGE
Trigger: TTCTCCAAAACCTCCCCTTCAGAGTCCTGGGATCCC...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCTCATTCCCATTGGGCTaGGGGTTGGCATCGGAACCA +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISSFPLG*GLASEP
Trigger: TGGTTCCGATGCCAACCCTCAGCCCAATGGGAATGA...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCTTAATGCCTGGGGAATaGACCTGGCTGCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISLMPGE*TWLPAT
Trigger: TGTGGCAGGCAGCCAGGTGCATTCCCCAGGCATTAA...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGTGCCACCCAATCAGATaGGAATGTTTAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARCHPIR*ECLGQS
Trigger: GCTTTGACCTAAACATTCCCATCTGATTGGGTGGCA...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTCACAGGGGGATGGCTaGGATTGGCTGGCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSSQGDG*DWLAEP
Trigger: GGGCTCAGCCAGCCAATCCCAGCCATCCCCCTGTGA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCTCGCCACTGGACACTaGTGGAGGCGGAGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAILATGH*WRRRGF
Trigger: AAAGCCCCTCCGCCTCCACCAGTGTCCAGTGGCGAG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTCTCCATGCTGGGCCTaGTGCCTTCCATGGCCATCC +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAISPCWA*CLPWPS
Trigger: GGATGGCCATGGAAGGCATCAGGCCCAGCATGGAGA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCGACATCATCCGATGGTaGGGTCCCATCATGCCTTGT +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISDIIRW*GPIMPC
Trigger: ACAAGGCATGATGGGACCTCACCATCGGATGATGTC...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCACCTGGGCCAGGGAGTaGTTTAGGGGTATGGCCCCC +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCTWARE*FRGMAP
Trigger: GGGGGCCATACCCCTAAAGCACTCCCTGGCCCAGGT...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCAGGCTTGGGTGCTGGTaGCGGAATGGGTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSRLGCW*RNGWSW
Trigger: CCAACTCCACCCATTCCGGCACCAGCACCCAAGCCT...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCATGCGGCAGGCTTGGGTaGTGGTGCCGGAATGGGTGG +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSCGRLG*WCRNGW
Trigger: CCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCA...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCTCTGTACCCCCAGGTaGCCAGCCTTCACTAGGGGT +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAILCTPR*PAFTRG
Trigger: ACCCCTAGTGAAGGCTGGGCACCTGGGGGTACAGAG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCGGGAATGCACCTGGCTaGCTGCCACAGATATATCCA +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISGNAPG*LPQIYP
Trigger: TGGATATATCTGTGGCAGGCAGCCAGGTGCATTCCC...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCGGTGAGGTCCCATCATaGCTTGTTGGAGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISGEVPS*LVGERL
Trigger: CAGCCTTTCTCCAACAAGGCATGATGGGACCTCACC...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCGGCAGCAGCTGGATTaGTCATCAGGGTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCRQQLD*SSGWAG
Trigger: GCCAGCCCACCCTGATGAGCAATCCAGCTGCTGCCG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCAGGCCCCCGATCCTTaGCAGGAATCATGCCCACGG +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCQAPDP*QESCPR
Trigger: CCGTGGGCATGATTCCTGGCAAGGATCGGGGGCCTG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCAGTGCTTTAGGGGTATaGCCCCCACTCTTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISSALGV*PPLLES
Trigger: TGACTCCAAGAGTGGGGGCCATACCCCTAAAGCACT...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCGAAGAATTCTGGTCCTaGTTGGCCGGAGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIEEFWS*LAGAGG
Trigger: GCCCCCAGCTCCGGCCAACCAGGACCAGAATTCTTC...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCTTCTGGGAAGAATTCTaGTCCTGGTTGGCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISFWEEF*SWLAGA
Trigger: AGCTCCGGCCAACCAGGACCAGAATTCTTCCCAGAA...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCGTGCTGGTGCCGGAATaGGTGGAGTTGGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIVLVPE*VELAAV
Trigger: GACTGCAGCCAACTCCACCCATTCCGGCACCAGCAC...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACGATTCTCTCCCAGTGTaGGGGGCTCGCCACTGGACA +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYDSLPV*GARHWT
Trigger: TGTCCAGTGGCGAGCCCCCCACACTGGGAGAGAATC...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCCTCACCAAATGGCAGTaGCACCATCTTCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISLTKWQ*HHLLLS
Trigger: GCTCAGCAGAAGATGGTGCCACTGCCATTTGGTGAG...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCGGGTGCTTTATGGTTTaGAGGGATCCCAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISGCFMV*RDPRTL
Trigger: CAGAGTCCTGGGATCCCTCCAAACCATAAAGCACCC...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTTGAGGTACCATCGGTaGCTCCTGGGACCCATGCCC +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAILRYHR*LLGPMP
Trigger: GGGCATGGGTCCCAGGAGCCACCGATGGTACCTCAA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTGGGGGAGACTGTACTaGAGGGAAGCCCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSWGRLY*REALGE
Trigger: TTCCCCCAGGGCTTCCCTCCAGTACAGTCTCCCCCA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAAGGGGGCCTTCTCCTaGGAAACCCATCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYKGAFS*ETHPSW
Trigger: CCAGGAGGGATGGGTTTCCCAGGAGAAGGCCCCCTT...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCCCCATCATGCCTTGTTaGAGAAAGGCTGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISPIMPC*RKAGGL
Trigger: GAGACCACCAGCCTTTCTCCAACAAGGCATGATGGG...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCGGACATCATCATGCCTaGAGAGCCCACAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIGHHHA*RAHRPR
Trigger: CCTGGGCCTGTGGGCTCTCCAGGCATGATGATGTCC...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGAGAAAAATGTGCCAGTaGGTTGGTATATTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARRKMCQ*VGILGD
Trigger: GTCTCCCAATATACCAACCCACTGGCACATTTTTCT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTTGCTCATCCTGGAGGTaGGGAGTCCAGGAACCCCCT +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGCSSWR*GVQEPP
Trigger: AGGGGGTTCCTGGACTCCTCACCTCCAGGATGAGCA...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCGGGGGCTGTAGCATTTaGTGGGGTCATCGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSGGCSI*WGHRVW
Trigger: CCACACTCGATGACCCCATCAAATGCTACAGCCCCC...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCTGGAGGAGCTGTGTTaGGGCTGGTGGGGTTACTGG +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCLEELC*GWWGYW
Trigger: CCAGTAACCCCACCAGCCTCAACACAGCTCCTCCAG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCACACTGGCCCACTGCTTaGTGGGTGCGTCCCTTAGCG +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSHWPTA*WVRPLA
Trigger: CGCTAAGGGACGCACCCAGCAAGCAGTGGGCCAGTG...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCACCCCAGGATTCTGCTaGGGTCCCCCACTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSTPGFC*GPPLCA
Trigger: AGCACAAAGTGGGGGACCGCAGCAGAATCCTGGGGT...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCGCAAGCCACTGTTGCTaGCTGGACCCTGAGACATGG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSASHCC*LDPETW
Trigger: CCATGTCTCAGGGTCCAGGCAGCAACAGTGGCTTGC...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCGGGGCCTCCAGGCTTaGAAAGTGCTGCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCRGLQA*KVLHLL
Trigger: CAGCAGATGCAGCACTTTGCAAGCCTGGAGGCCCCG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCGCCCTGGACCTCCCATaGCAGGTAATGCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSALDLP*QVMLVP
Trigger: TGGGACTAGCATTACCTGGCATGGGAGGTCCAGGGC...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACGCATGGACATCATCATaGCTGGAGAGCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYAWTSS*LESPQA
Trigger: GGCCTGTGGGCTCTCCAGGCATGATGATGTCCATGC...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGAATAACACTGTGTATTaGAGCTGCCAAAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARNNTVY*SCQRER
Trigger: TCTTTCCCTTTGGCAGCTGCAATACACAGTGTTATT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCAGCTCCAGCATTCTCTaGGTGCGTGCCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCSSSIL*VRASCC
Trigger: GCAGCAGGAGGCACGCACCCAGAGAATGCTGGAGCT...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACTATGGCCCCCACTCTTaGAGTCACAGGGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYYGPHS*SHRGMA
Trigger: AGCCATCCCCCTGTGACTCCAAGAGTGGGGGCCATA...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGGCAGGCTTGGGTGCTaGTGCCGGAATGGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSGRLGC*CRNGWS
Trigger: ACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCGGTGGTCGGGTCCTATaGTCCCAGACTGGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIGGRVL*SQTGSS
Trigger: TGAACTCCCAGTCTGGGACCATAGGACCCGACCACC...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCAATCCTTGGGGGTTTaGGAAGCGTTCCCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCQSLGV*EAFPSA
Trigger: GGCCGAGGGGAACGCTTCCCAAACCCCCAAGGATTG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTTCCATGGCCATCCCTaGGGGGAGACCCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIFHGHP*GETQLF
Trigger: AAACAGCTGGGTCTCCCCCCAGGGATGGCCATGGAA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCAGGCCGCGCTGAACTaGAGGAGCTGTGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCQAALN*RSCVEA
Trigger: AGCCTCAACACAGCTCCTCCAGTTCAGCGCGGCCTG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACCAGAGGGTTAATGCCTaGGGAATGCACCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYQRVNA*GMHLAA
Trigger: GGCAGCCAGGTGCATTCCCCAGGCATTAACCCTCTG...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCATTTCCCAGCATGGCTaGGGAGGCCATGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCISQHG*GGHGEG
Trigger: CCCCTCACCATGGCCTCCCCAGCCATGCTGGGAAAT...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTTTCACAGAGGCAGGCTaGCTGGCTGTAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGFTEAG*LAVGGG
Trigger: CCCACCTCCTACAGCCAGCCAGCCTGCCTCTGTGAA...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACCATTGGGCTGAGGGTTaGCATCGGAACCACGGGGTT +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYHWAEG*HRNHGV
Trigger: AACCCCGTGGTTCCGATGCCAACCCTCAGCCCAATG...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCACCATCGGTGGCTCCTaGGACCCATGCCCCATGATA +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSTIGGS*DPCPMI
Trigger: TATCATGGGGCATGGGTCCCAGGAGCCACCGATGGT...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCGCATCTGCTGAACTTTaGGGCAGGTTGCTGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCASAEL*GRLLGR
Trigger: CCGCCCCAGCAACCTGCCCCAAAGTTCAGCAGATGC...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCCGGGGCCTCATCTGTaGGGGGATCATGATGTTCTG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSPGPHL*GDHDVL
Trigger: CAGAACATCATGATCCCCCCACAGATGAGGCCCCGG...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTTGCTGCCTGGACCCTaGGACATGGGAAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSLLPGP*DMGRNG
Trigger: ACCATTCCTTCCCATGTCTCAGGGTCCAGGCAGCAA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCAGGGGAGTCGTCATCTaGGCTGGCCACAGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIRGVVI*AGHSLD
Trigger: ATCAAGACTGTGGCCAGCTCAGATGACGACTCCCCT...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGATTAATACTCTGCTCTaGGGTCGTAGTTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARINTLL*GRSLVF
Trigger: AAAAACCAAACTACGACCTCAGAGCAGAGTATTAAT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACGTGCGTGCCTCCTGCTaGCAGAGGAAAATCTCGCAT +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYVRASC*QRKISH
Trigger: ATGCGAGATTTTCCTCTGGCAGCAGGAGGCACGCAC...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCATTCTCTGGGTGCGTaGCTCCTGCTGCCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCHSLGA*LLLPEE
Trigger: TTCCTCTGGCAGCAGGAGGCACGCACCCAGAGAATG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTGGGTCCTTTCCCCTTaGAGCTCCAGCATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSWVLSP*SSSILW
Trigger: CCAGAGAATGCTGGAGCTGCAAGGGGAAAGGACCCA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACGAGTTCCTCTCGGGTTaGAGCAGAAACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYEFLSG*SRNSCW
Trigger: CCAGCAGCTGTTTCTGCTGCAACCCGAGAGGAACTC...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCTGTTCAGAGGCGCTGTaGTTCTCTCTGTCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISCSEAL*FSLSCC
Trigger: ACAACAAGACAGAGAGAAGCACAGCGCCTCTGAACA...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTTACTCCTGCTGGGGGTaGTCACCAAATGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGYSCWG*SPNGSG
Trigger: GCCACTGCCATTTGGTGAGCACCCCCAGCAGGAGTA...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTCTCTGCTGTGGAAGTaGGTCCTTTCCCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSSLLWK*VLSPCS
Trigger: GCTGCAAGGGGAAAGGACCCACTTCCACAGCAGAGA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACGCAGTAGTTTGGCCATaGGAGGGGGTAGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYAVVWP*EGVEDL
Trigger: CAGGTCTTCTACCCCCTCCCATGGCCAAACTACTGC...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTTGGTGCCGGAATGGGTaGAGTTGGCTGCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGWCRNG*SWLQSG
Trigger: ACCAGACTGCAGCCAACTCCACCCATTCCGGCACCA...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTGTTGGGAGTTGAGTTaGGCCCAGTACCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAICWELS*AQYHLG
Trigger: CCCCAGATGGTACTGGGCCCAACTCAACTCCCAACA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACGGGATTGGGCCATCATaGCCTGTATTGGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYGIGPS*PVLALL
Trigger: CAGAAGGGCCAATACAGGCCATGATGGCCCAATCCC...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTGCTCGGGAGTCATATaGTCAAGGTGGTCGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSCSGVI*SRWSGP
Trigger: AGGACCCGACCACCTTGACCATATGACTCCCGAGCA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGGCTCCATGTGGCGCTaGGAGCCTGGAATCATCCTG +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSGSMWR*EPGIIL
Trigger: CAGGATGATTCCAGGCTCCCAGCGCCACATGGAGCC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTGGGAAGGAATGGTCTaGGGCCCATGCCATACTCCT +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSWEGMV*GPCHTP
Trigger: AGGAGTATGGCATGGGCCCCAGACCATTCCTTCCCA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTCTGGACCCTGAGACATaGGAAGGAATGGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGLDPET*EGMVWG
Trigger: GCCCCAGACCATTCCTTCCCATGTCTCAGGGTCCAG...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCCCAGCATTGGTGACTaGACTTGGTGCATCGTGGGA +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIPSIGD*TWCIVG
Trigger: TCCCACGATGCACCAAGTCCAGTCACCAATGCTGGG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTGGGCTGTTTACGGCCTaGAACTTCCCCTCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGGLFTA*NFPSRE
Trigger: TTCCCTCGAGGGGAAGTTCCAGGCCGTAAACAGCCC...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTCATGGGGTTGTGGCCTaGCATGGATGGAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGHGVVA*HGWSCT
Trigger: GGTACAGCTCCATCCATGCCAGGCCACAACCCCATG...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCTCATCAGGGTGGGCTaGCCGGGCATTGTAGATTGT +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAILIRVG*PGIVDC
Trigger: ACAATCTACAATGCCCGGCCAGCCCACCCTGATGAG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTGGGTTGCCAGGTCCTTaGCTAAATCCACCCATGCCC +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGGLPGP*LNPPMP
Trigger: GGGCATGGGTGGATTTAGCCAAGGACCTGGCAACCC...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCGTCCCAGGATCTCTCTaGTCAAAGGAGTCGGCGGAA +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCVPGSL*SKESAE
Trigger: TTCCGCCGACTCCTTTGATCAGAGAGATCCTGGGAC...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTGGCTTTGGGATCTGCTaGAGAGCTATTGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGGFGIC*RAIAPL
Trigger: CAGGGGAGCAATAGCTCTTCAGCAGATCCCAAAGCC...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCATGCTCCAGCTGCTCCTaGGATAGGCCATCGGGATTC +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSCSSCS*DRPSGF
Trigger: GAATCCCGATGGCCTATCTCAGGAGCAGCTGGAGCA...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCACATCTCTATGTCCTTaGGGGCCAAATGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAITSLCP*GPNGAP
Trigger: GGGAGCTCCATTTGGCCCTCAAGGACATAGAGATGT...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGGCACCATCTTCTGCTaGGCAGGCAGCATGTCTGAG +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSGTIFC*AGSMSE
Trigger: CTCAGACATGCTGCCTGCTCAGCAGAAGATGGTGCC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCGCCCAATTGGTTCTCTaGGATTCCGCAAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIAQLVL*DSASHC
Trigger: ACAGTGGCTTGCGGAATCTCAGAGAACCAATTGGGC...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCACGAGCCCAGCATTGGTaGCTGGACTTGGTGCATCGT +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSRAQHW*LDLVHR
Trigger: ACGATGCACCAAGTCCAGTCACCAATGCTGGGCTCG...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCAAGGGTCACGACACTaGAGTGCTCATCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCQGSRH*SAHPGG
Trigger: ACCTCCAGGATGAGCACTGCAGTGTCGTGACCCTTG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCGCTCCCTTTTCCCCTTaGCCTTGGCACCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCAPFSP*PWHHFQ
Trigger: CTGGAAATGGTGCCAAGGGCAAGGGGAAAAGGGAGC...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTCCTGGAGGGAACACTaGTGGACAACCACTTGTTCC +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAISWREH*WTTTCS
Trigger: GGAACAAGTGGTTGTCCAGCAGTGTTCCCTCCAGGA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAAGACCTGGTCTAGATaGAGGGTTGGGGACATTCGG +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYKTWSR*RVGDIR
Trigger: CCGAATGTCCCCAACCCTGCATCTAGACCAGGTCTT...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCCCATGCCATACTCCTaGTGGGGGTGCTCACCAAAT +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCPMPYS*WGCSPN
Trigger: ATTTGGTGAGCACCCCCAGCAGGAGTATGGCATGGG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCATCCGCAAGCCACTGTTaGTGCCTGGACCCTGAGACA +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSSASHC*CLDPET
Trigger: TGTCTCAGGGTCCAGGCAGCAACAGTGGCTTGCGGA...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCATGCACCTGGCTGCCTaGCACAGATATATCCAAGGG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIMHLAA*HRYIQG
Trigger: CCCTTGGATATATCTGTGGCAGGCAGCCAGGTGCAT...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCGGCCATGGTGAGGGGTaGTTTATGGTTTGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIGHGEG*FMVWRD
Trigger: ATCCCTCCAAACCATAAAGCACCCCTCACCATGGCC...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTCGCCCATCATCCCCTaGATGTGTGAAAACCCAGGT +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAISPIIP*MCENPG
Trigger: ACCTGGGTTTTCACACATGCAGGGGATGATGGGCGA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACGGTCCCATCATGCCCTaGATGGACATCATCATGCCT +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYGPIMP*MDIIMP
Trigger: AGGCATGATGATGTCCATGCAGGGCATGATGGGACC...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTCCCTTACCTAGGCTTTaGGATTGGGCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGPLPRL*DWAIMA
Trigger: GGCCATGATGGCCCAATCCCAAAGCCTAGGTAAGGG...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACGTCATATGGTCAAGGTaGTCGGGTCCTATGGTCCCA +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYVIWSR*SGPMVP
Trigger: TGGGACCATAGGACCCGACCACCTTGACCATATGAC...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACTGGACCATCATGTCCTaGAGGGAACACTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYWTIMS*REHCWT
Trigger: TGTCCAGCAGTGTTCCCTCCAGGACATGATGGTCCA...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCTGGTCGGGCCCAATTaGTTCTCTGAGATTCCGCAA +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSLVGPN*FSEIPQ
Trigger: TTGCGGAATCTCAGAGAACCAATTGGGCCCGACCAG...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACCTGAAGGGGAGGTTTTaGAGAAGAGGTCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYLKGRF*RRGPSR
Trigger: CCTGGATGGACCTCTTCTCCAAAACCTCCCCTTCAG...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACTCATTGATGGCAAGTTaGGAGAACGAGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYSLMAS*ENELEG
Trigger: CCCCTCCAGCTCGTTCTCCCAACTTGCCATCAATGA...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCGGGTCCCACGGCATTTaGAGAGGGCATCTGATTGGA +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCGSHGI*RGHLIG
Trigger: TCCAATCAGATGCCCTCTCCAAATGCCGTGGGACCC...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCATGAGGAGGTATGTTaGGTCCCACGGCATTTGGAG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSHEEVC*VPRHLE
Trigger: CTCCAAATGCCGTGGGACCCAACATACCTCCTCATG...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCACAAGCCAGGCCCCATTaGGACCCCATGAGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSQARPH*DPMRRY
Trigger: ATACCTCCTCATGGGGTCCCAATGGGGCCTGGCTTG...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTGCCATTGTGAGGGAATaGAACCTGCTGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGAIVRE*NLLWGR
Trigger: TCTCCCCCACAGCAGGTTCCATTCCCTCACAATGGC...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCGACCTCCTGCAGATCTaGGTCTGTAAACACCGAAGG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIDLLQI*VCKHRR
Trigger: CCTTCGGTGTTTACAGACCCAGATCTGCAGGAGGTC...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCCATCATGCCCTGCATaGACATCATCATGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIPSCPA*TSSCLE
Trigger: CTCCAGGCATGATGATGTCCATGCAGGGCATGATGG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCAGAACGTCTTACGCATaGGAGGGGGAGGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIRTSYA*EGEERE
Trigger: TTCCCTTTCCTCCCCCTCCCATGCGTAAGACGTTCT...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTGCGCTGGATATCTCTaGGAGTTTGTAAGGAGCGCT +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSCAGYL*EFVRSA
Trigger: AGCGCTCCTTACAAACTCTCAGAGATATCCAGCGCA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCGAGAATGTGGCATGTTaGTACCATCAGAAAATGGCT +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISENVAC*YHQKMA
Trigger: AGCCATTTTCTGATGGTATCAACATGCCACATTCTC...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTGAAGTGATGGAGACTTaGGGTGGACAGGTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGEVMET*GGQVKQ
Trigger: CTGCTTCACCTGTCCACCTCAAGTCTCCATCACTTC...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCACGGGGTTTGGACCTaGAATTCGAGGATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSHGVWT*NSRILC
Trigger: ACACAGAATCCTCGAATTTCAGGTCCAAACCCCGTG...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCCTGGAATCTCATCTTaGCAAGGATCGGCACATCCC +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCPGISS*QGSAHP
Trigger: GGGATGTGCCGATCCTTGTCAAGATGAGATTCCAGG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCCTCTTTGTTTTTCTCTaGTGTGGAAGTGGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISLFVFL*CGSGSF
Trigger: AAAGGACCCACTTCCACAGCAGAGAAAAACAAAGAG...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCATGGGTGGAGTTGGCTaGAGTCTGGTATTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSMGGVG*SLVFWE
Trigger: TTCCCAGAATACCAGACTGCAGCCAACTCCACCCAT...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTGGTGACTGGACTTGGTaGATCGTGGGAGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGGDWTW*IVGDFR
Trigger: TCTGAAGTCTCCCACGATGCACCAAGTCCAGTCACC...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTTTTCCCGCAATCCCTaGCCTCCTGGTATCAAGACA +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSFSRNP*PPGIKT
Trigger: TGTCTTGATACCAGGAGGCCAGGGATTGCGGGAAAA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCGAGTGTGGTGTGTGCTaGGAATCCTGGGACTTTATG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSECGVC*ESWDFM
Trigger: CATAAAGTCCCAGGATTCCCAGCACACACCACACTC...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCTCACTGCCCTATTGTTaGGAGTTGAGTTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCSLPYC*ELSWAQ
Trigger: CTGGGCCCAACTCAACTCCCAACAATAGGGCAGTGA...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCCTATGGTCCCAGACTaGGAGTTCATAGAAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSPMVPD*EFIEGG
Trigger: TCCACCTTCTATGAACTCCCAGTCTGGGACCATAGG...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTTGGAGGGAACACTGCTaGACAACCACTTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGWREHC*TTTCSC
Trigger: GCAGGAACAAGTGGTTGTCCAGCAGTGTTCCCTCCA...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCGGGGGCAGAGAATGTaGCATGTTGATACCATCAGA +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIRGQRM*HVDTIR
Trigger: TCTGATGGTATCAACATGCCACATTCTCTGCCCCCG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCCGCTGAAAATGCCCTaGCCAGGAGGAAAATTTCGA +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIPLKMP*PGGKFR
Trigger: TCGAAATTTTCCTCCTGGCCAGGGCATTTTCAGCGG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACTCTTCAGACAATCCTTaGGGGTTTGGGAAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYSSDNP*GFGKRS
Trigger: GGAACGCTTCCCAAACCCCCAAGGATTGTCTGAAGA...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCACGGCTGTTAGTCCTCTaGTCGGGCCCAATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSRLLVL*SGPIGS
Trigger: AGAACCAATTGGGCCCGACCAGAGGACTAACAGCCG...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCACCTGGGGAATGCACCTaGCTGCCTGCCACAGATATA +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSPGECT*LPATDI
Trigger: TATATCTGTGGCAGGCAGCCAGGTGCATTCCCCAGG...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACATTGGTGACTGGACTTaGTGCATCGTGGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYIGDWT*CIVGDF
Trigger: GAAGTCTCCCACGATGCACCAAGTCCAGTCACCAAT...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGAATGGAACCTGCTGTaGGGGAGACTGTACTGGAGG +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSEWNLL*GRLYWR
Trigger: CCTCCAGTACAGTCTCCCCCACAGCAGGTTCCATTC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGTGGCCTGGCATGGATaGAGCTGTACCAAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSVAWHG*SCTKRD
Trigger: ATCCCTCTTGGTACAGCTCCATCCATGCCAGGCCAC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACACTCTGTGTGTTTCCTaGTGGAGAGCTCCTCACTTT +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYTLCVS*WRAPHF
Trigger: AAAGTGAGGAGCTCTCCATCAGGAAACACACAGAGT...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGTGCTGCATCTGCTaGACTTTGGGGCAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSKCCIC*TLGQVA
Trigger: AGCAACCTGCCCCAAAGTTCAGCAGATGCAGCACTT...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCTGTAGATTGTGCTGGTaGCATCATCCGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCCRLCW*HHPMVR
Trigger: CCTCACCATCGGATGATGTCACCAGCACAATCTACA...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCTGTTCTCCTATTGCATaGCCAATAGTAAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISCSPIA*PIVSTP
Trigger: AGGAGTACTTACTATTGGTCATGCAATAGGAGAACA...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCATCCCTTAGCGCTCGCTaGCTGTATGCCTTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSSLSAR*LYAFFL
Trigger: GAGGAAAAAGGCATACAGGCAGCGAGCGCTAAGGGA...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCTTCAGCCACGCTATCTaGTCGGGAGTCATATGGTCA +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCFSHAI*SGVIWS
Trigger: TGACCATATGACTCCCGAGCAGATAGCGTGGCTGAA...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGTTGGGGTCCCATCATaGCCTGCATGGACATCATCA +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSVGVPS*PAWTSS
Trigger: TGATGATGTCCATGCAGGGCATGATGGGACCCCAAC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCACAATCCCTGGCCTCCTaGTATCAAGACACCAGGACA +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSQSLAS*YQDTRT
Trigger: TGTCCTGGTGTCTTGATACCAGGAGGCCAGGGATTG...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTGTTTTTCTCTGCTGTaGAAGTGGGTCCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSCFSLL*KWVLSP
Trigger: AGGGGAAAGGACCCACTTCCACAGCAGAGAAAAACA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCGTCAGAGTCATCGTTTaGAGTCCCAGGATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCVRVIV*SPRISL
Trigger: CAGAGAGATCCTGGGACTCCAAACGATGACTCTGAC...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCATCTGTGGCAGTAGTTTaGCCATGGGAGGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSSVAVV*PWEGVE
Trigger: TTCTACCCCCTCCCATGGCCAAACTACTGCCACAGA...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACGTATTCGAGGGAAAATaGGGTTATTCCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYVFEGK*GYSQAP
Trigger: TGGAGCCTGGGAATAACCCCATTTTCCCTCGAATAC...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCACCAGGGCCCATCTGTaGGGGAATTCCTTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCTRAHL*GNSFWK
Trigger: TTTCCAAAAGGAATTCCCCCACAGATGGGCCCTGGT...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGTGAGGGGTGCTTTATaGTTTGGAGGGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSVRGAL*FGGIPG
Trigger: TCCTGGGATCCCTCCAAACCATAAAGCACCCCTCAC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTTTGTTGGAGAAAGGCTaGTGGTCTCATGGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGLLEKG*WSHGVV
Trigger: CACAACCCCATGAGACCACCAGCCTTTCTCCAACAA...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTCTGACACCACAGCTCTaGCGAGTGGTTTTGTACCAA +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGLTPQL*RVVLYQ
Trigger: TTGGTACAAAACCACTCGCCAGAGCTGTGGTGTCAG...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCTGGAATGCATTGATTaGAATCCTGAGCTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSLECID*NPELAV
Trigger: GACTGCAAGCTCAGGATTTCAATCAATGCATTCCAG...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACGAGACAAGACAGTGCTaGAGAGCACTTGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYETRQC*RALELK
Trigger: TTTCAGTTCAAGTGCTCTTCAGCACTGTCTTGTCTC...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCGCTCGCTGCCTGTATaGCTTTTTCCTCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSRSLPV*LFPLCF
Trigger: AAAACAAAGAGGAAAAAGGCATACAGGCAGCGAGCG...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTAGAGTTTATCATGCCTaGAAATCCAGGGAGGCGCAT +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGRVYHA*KSREAH
Trigger: ATGCGCCTCCCTGGATTTGCAGGCATGATAAACTCT...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCGGTGGAACTGGGCATTaGAAACTTGGACATTCGAGA +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCGGTGH*KLGHSR
Trigger: TCTCGAATGTCCAAGTTTGCAATGCCCAGTTCCACC...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCACAGAATGACGCCAACTaGGCCCACATTCAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSQNDAN*AHIQSF
Trigger: AAAGGACTGAATGTGGGCCCAGTTGGCGTCATTCTG...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCCTGATTGGAGAATTTaGAATCCAGCTGGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCPDWRI*NPAGGF
Trigger: GAAACCCCCAGCTGGATTCCAAATTCTCCAATCAGG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGTACACCACTTTGGCTaGAGTCTTCTGAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSVHHFG*SLLSRC
Trigger: ACACCTGCTCAGAAGACTCCAGCCAAAGTGGTGTAC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAACACGTACACCACTTTaGCTGGAGTCTTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSTRTPL*LESSEQ
Trigger: CTGCTCAGAAGACTCCAGCCAAAGTGGTGTACGTGT...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCGAAATGTTCTGGATGTaGAAAGAGACGATAGTTTCA +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISEMFWM*KETIVS
Trigger: TGAAACTATCGTCTCTTTCCACATCCAGAACATTTC...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGTTCTGGGAAAGGGTTaGCTCTGGAGGCATGGTATA +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSVLGKG*LWRHGI
Trigger: TATACCATGCCTCCAGAGCCAACCCTTTCCCAGAAC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCATCATAATAGAGAGTaGGTTCTGGGAAAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSHHNRE*VLGKGW
Trigger: CCAACCCTTTCCCAGAACCCACTCTCTATTATGATG...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTAAATATTGCAGCGTCTaGCTGGGCTTCTCAGATGGA +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGKYCSV*LGFSDG
Trigger: TCCATCTGAGAAGCCCAGCCAGACGCTGCAATATTT...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCAAACATCATGTTTCCTaGGTTGCCAGGTCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCKHHVS*VARSLA
Trigger: AGCCAAGGACCTGGCAACCCAGGAAACATGATGTTT...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCAACAGAAAAGAATCCTaGGAGAAGCCAGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSNRKES*EKPVQR
Trigger: CCTTTGGACTGGCTTCTCCCAGGATTCTTTTCTGTT...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCCCCCTTCTCAAAGATaGCCCTTGTCTTTCAATATG +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCPPSQR*PLSFNM
Trigger: CATATTGAAAGACAAGGGTCATCTTTGAGAAGGGGG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACCACTTTGTGCTCCTGTaGATTCTTTCTCATCAGGAA +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYHFVLL*ILSHQE
Trigger: TTCCTGATGAGAAAGAATTCACAGGAGCACAAAGTG...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTGGCATATTATTCATTaGTGGCAAGTTGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSWHIIH*WQVGRT
Trigger: CGTTCTCCCAACTTGCCATCAATGAATAATATGCCA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGTAGGTGCCATCATTaGTACCCAAGTCCACAAAAA +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYSRCHH*YPSPQK
Trigger: TTTTTGTGGACTTGGGTATCAATGATGGCACCTACT...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAATAGTCCAAAGGTCTaGAGATGGATTCTCCACCTA +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYNSPKV*RWILHL
Trigger: TAGGTGGAGAATCCATCTTCAGACCTTTGGACTATT...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCAAGGAAACACTTAACTaGGGAGACAGAGCAAAATCG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIKETLN*GDRAKS
Trigger: CGATTTTGCTCTGTCTCCTCAGTTAAGTGTTTCCTT...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCTTCAAAACAGCTTCTaGAGCTTTATTGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAILQNSF*SFIGHL
Trigger: GAGATGGCCAATAAAGCTGCAGAAGCTGTTTTGAAG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCCTGTTTACCCTGATTaGAGAATTTGGAATCCAGCT +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIPVYPD*RIWNPA
Trigger: AGCTGGATTCCAAATTCTCCAATCAGGGTAAACAGG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCTTGTTAGAAATGTTCTaGATGTGGAAAGAGACGATA +
Preference number: 4 (lower is better)
Translates to: QSQEDARHGRRGFARFISLLEMF*MWKETI
Trigger: TATCGTCTCTTTCCACATCCAGAACATTTCTAACAA...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTGAGTTGGCTGCAGTCTaGTATTCTGGGAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGELAAV*YSGKNS
Trigger: AGAATTCTTCCCAGAATACCAGACTGCAGCCAACTC...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGCAACACATGACCGATaGCAATTCTCAAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSATHDR*QFSKHS
Trigger: GCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTAGAACTTTCCAAAAATaGTCTCTGCCACCCAATCAG +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGRTFQK*SLPPNQ
Trigger: CTGATTGGGTGGCAGAGATCATTTTTGGAAAGTTCT...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGTCTTGATAGCATCATaGTATAACGGGGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSVLIAS*YNGVEL
Trigger: CAGTTCCACCCCGTTATACCATGATGCTATCAAGAC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTCTGAGGTCGTAGTTTaGTTTTTCTATACACTGCAG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAISEVVV*FFYTLQ
Trigger: CTGCAGTGTATAGAAAAACCAAACTACGACCTCAGA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCATCCAAAAATGATCTCTaGCACCCAATCAGATGGGAA +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSSKNDL*HPIRWE
Trigger: TTCCCATCTGATTGGGTGGCAGAGATCATTTTTGGA...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACTCTCTGTTCTCCTATTaGATGACCAATAGTAAGTAC +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYSLFSY*MTNSKY
Trigger: GTACTTACTATTGGTCATGCAATAGGAGAACAGAGA...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTTTTCATTAATACTCTaGTCTGAGGTCGTAGTTTGG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIFSLIL*SEVVVW
Trigger: CCAAACTACGACCTCAGAGCAGAGTATTAATGAAAA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCAACAAGAGAAAAATGTaGCAGTGGGTTGGTATATTG +
Preference number: 4 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAINKRKM*QWVGIL
Trigger: CAATATACCAACCCACTGGCACATTTTTCTCTTGTT...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCTGGAACCATTTCATCTaGAGAAAAGGGTACATCTCT +
Preference number: 4 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCWNHFI*RKGYIS
Trigger: AGAGATGTACCCTTTTCTCCAGATGAAATGGTTCCA...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAAAATTTCGACCATCTaGGATTTTTGGCACATCATC +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYKISTI*DFWHII
Trigger: GATGATGTGCCAAAAATCCCAGATGGTCGAAATTTT...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAATAGTAAGTACTCCTaGAACTCCCTCAAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KGRKHTENGATHDRWQFSNSKYS*NSLKAA
Trigger: AGCTGCTTTGAGGGAGTTCCAGGAGTACTTACTATT...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR TCA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTTCTATACACTGCAGTTaGAAGAAAATAGTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGSIHCS*KKIVQR
Trigger: CCTTTGGACTATTTTCTTTCAACTGCAGTGTATAGA...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR GCA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTCAATATGTCCAATTTaGTATTTCTTCTACATCGGG +
Preference number: 4 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSSICPI*YFFYIG
Trigger: CCCGATGTAGAAGAAATAGCAAATTGGACATATTGA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CCA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACACAGAAACAAAATCCTaGATAGCTTTTAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: HTENGATHDRWQFSKHSYTETKS*IAFSIC
Trigger: ACAGATGCTAAAAGCTATCCAGGATTTTGTTTCTGT...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS GCA 90 bp CCACAGGCCCAGGGTGGGTGTAGAGCCCGGCAGGCCCCCGATCCTTaGCAGGAATCATGCCCACGGCAGCAGCTGGATTGCTCATCAGGG +
Preference number: 5 (lower is better)
Translates to: PQAQGGCRARQAPDP*QESCPRQQLDCSSG
Trigger: CCCTGATGAGCAATCCAGCTGCTGCCGTGGGCATGATTCCTGGCAAGGATCGGGGGCCTGCCGGGCTCTACACCCACCCTGGGCCTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 90 bp CTCCCGGTCCAGGGGACGTGGGGGTGCGGCAGGCTTGGGTGCTGGTaGCGGAATGGGTGGAGTTGGCTGCAGTCTGGTATTCTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: LPVQGTWGCGRLGCW*RNGWSWLQSGILGR
Trigger: TCTTCCCAGAATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCACCCCCACGTCCCCTGGACCGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 90 bp AGGACTCTCCCGGTCCAGGGGACGTGGGGGTGCGGCAGGCTTGGGTaGTGGTGCCGGAATGGGTGGAGTTGGCTGCAGTCTGGTATTCTG +
Preference number: 5 (lower is better)
Translates to: RTLPVQGTWGCGRLG*WCRNGWSWLQSGIL
Trigger: CAGAATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCACCCCCACGTCCCCTGGACCGGGAGAGTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp ACTCTCCCGGTCCAGGGGACGTGGGGGTGCGGCAGGCTTGGGTGCTaGTGCCGGAATGGGTGGAGTTGGCTGCAGTCTGGTATTCTGGGA +
Preference number: 5 (lower is better)
Translates to: TLPVQGTWGCGRLGC*CRNGWSWLQSGILG
Trigger: TCCCAGAATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCACCCCCACGTCCCCTGGACCGGGAGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp GCTCCAGCTGCTCCTGAGATAGGCCATCGGGATTCTCTCCCAGTGTaGGGGGCTCGCCACTGGACACTGGTGGAGGCGGAGGGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: APAAPEIGHRDSLPV*GARHWTLVEAEGLW
Trigger: CCAAAGCCCCTCCGCCTCCACCAGTGTCCAGTGGCGAGCCCCCCACACTGGGAGAGAATCCCGATGGCCTATCTCAGGAGCAGCTGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp GTTCTGTTGGGGTCCCATCATGCCCTGCATGGACATCATCATGCCTaGAGAGCCCACAGGCCCAGGGTGGGTGTAGAGCCCGGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VLLGSHHALHGHHHA*RAHRPRVGVEPGRP
Trigger: GGGCCTGCCGGGCTCTACACCCACCCTGGGCCTGTGGGCTCTCCAGGCATGATGATGTCCATGCAGGGCATGATGGGACCCCAACAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp GACAGGCTCACCGAGTTCCTCTCGGGTTGCAGCAGAAACAGCTGCTaGGGGCAGTGGCACTGGCCCACTGCTTGCTGGGTGCGTCCCTTA +
Preference number: 5 (lower is better)
Translates to: DRLTEFLSGCSRNSC*GQWHWPTACWVRPL
Trigger: TAAGGGACGCACCCAGCAAGCAGTGGGCCAGTGCCACTGCCCCCAGCAGCTGTTTCTGCTGCAACCCGAGAGGAACTCGGTGAGCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp GGCAGGCCCCCGATCCTTGCCAGGAATCATGCCCACGGCAGCAGCTaGATTGCTCATCAGGGTGGGCTGGCCGGGCATTGTAGATTGTGC +
Preference number: 5 (lower is better)
Translates to: GRPPILARNHAHGSS*IAHQGGLAGHCRLC
Trigger: GCACAATCTACAATGCCCGGCCAGCCCACCCTGATGAGCAATCCAGCTGCTGCCGTGGGCATGATTCCTGGCAAGGATCGGGGGCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS-3UTR CAA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGGCAGGCCCCCGATCCTaGCCAGGAATCATGCCCACG +
Preference number: 5 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARAGPRS*PGIMPT
Trigger: CGTGGGCATGATTCCTGGCAAGGATCGGGGGCCTGC...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS CCA 90 bp GGGACGTGGGGGTGCGGCAGGCTTGGGTGCTGGTGCCGGAATGGGTaGAGTTGGCTGCAGTCTGGTATTCTGGGAAGAATTCTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: GTWGCGRLGCWCRNG*SWLQSGILGRILVL
Trigger: CAGGACCAGAATTCTTCCCAGAATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCACCCCCACGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp CCAGGGGACGTGGGGGTGCGGCAGGCTTGGGTGCTGGTGCCGGAATaGGTGGAGTTGGCTGCAGTCTGGTATTCTGGGAAGAATTCTGGT +
Preference number: 5 (lower is better)
Translates to: PGDVGVRQAWVLVPE*VELAAVWYSGKNSG
Trigger: ACCAGAATTCTTCCCAGAATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCACCCCCACGTCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 90 bp GGTGCGGCAGGCTTGGGTGCTGGTGCCGGAATGGGTGGAGTTGGCTaGAGTCTGGTATTCTGGGAAGAATTCTGGTCCTGGTTGGCCGGA +
Preference number: 5 (lower is better)
Translates to: GAAGLGAGAGMGGVG*SLVFWEEFWSWLAG
Trigger: TCCGGCCAACCAGGACCAGAATTCTTCCCAGAATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp CAGGCTTGGGTGCTGGTGCCGGAATGGGTGGAGTTGGCTGCAGTCTaGTATTCTGGGAAGAATTCTGGTCCTGGTTGGCCGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QAWVLVPEWVELAAV*YSGKNSGPGWPELG
Trigger: CCCCAGCTCCGGCCAACCAGGACCAGAATTCTTCCCAGAATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCACCCAAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp TGGGGGTGCGGCAGGCTTGGGTGCTGGTGCCGGAATGGGTGGAGTTaGCTGCAGTCTGGTATTCTGGGAAGAATTCTGGTCCTGGTTGGC +
Preference number: 5 (lower is better)
Translates to: WGCGRLGCWCRNGWS*LQSGILGRILVLVG
Trigger: GCCAACCAGGACCAGAATTCTTCCCAGAATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS-3UTR CAA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGGGAGGCGGAGGGGCTTaGGGATCTGCTGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARGGGGA*GSAEEL
Trigger: TAGCTCTTCAGCAGATCCCAAAGCCCCTCCGCCTCC...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGTCCCATTCTGGGGGCTaGTTCGCCCATCATCCCCTG +
Preference number: 5 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARSHSGG*FAHHPL
Trigger: CAGGGGATGATGGGCGAACAAGCCCCCAGAATGGGA...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS CCA 90 bp TGCATCGTGGGAGACTTCAGAGGGTTAATGCCTGGGGAATGCACCTaGCTGCCTGCCACAGATATATCCAAGGGCTTCCGCCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: CIVGDFRGLMPGECT*LPATDISKGFRPRP
Trigger: CGGCCTGGGGCGGAAGCCCTTGGATATATCTGTGGCAGGCAGCCAGGTGCATTCCCCAGGCATTAACCCTCTGAAGTCTCCCACGATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS TCA 90 bp GGCCACCTGACTCTACATTTCCCAGCATGGCTGGGGAGGCCATGGTaGGGGGTGCTTTATGGTTTGGAGGGATCCCAGGACTCTGAAGGG +
Preference number: 5 (lower is better)
Translates to: GHLTLHFPAWLGRPW*GVLYGLEGSQDSEG
Trigger: CCCTTCAGAGTCCTGGGATCCCTCCAAACCATAAAGCACCCCTCACCATGGCCTCCCCAGCCATGCTGGGAAATGTAGAGTCAGGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 90 bp TTGAGGTTCCCCGAGGGCGAGCCCAGCATTGGTGACTGGACTTGGTaGATCGTGGGAGACTTCAGAGGGTTAATGCCTGGGGAATGCACC +
Preference number: 5 (lower is better)
Translates to: LRFPEGEPSIGDWTW*IVGDFRGLMPGECT
Trigger: GGTGCATTCCCCAGGCATTAACCCTCTGAAGTCTCCCACGATGCACCAAGTCCAGTCACCAATGCTGGGCTCGCCCTCGGGGAACCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 90 bp TACCAAGAGGGATGTCCGGAGTTCCCACTGGCCCTGGACCTCCCATaGCAGGTAATGCTAGTCCCATTCTGGGGGCTTGTTCGCCCATCA +
Preference number: 5 (lower is better)
Translates to: YQEGCPEFPLALDLP*QVMLVPFWGLVRPS
Trigger: TGATGGGCGAACAAGCCCCCAGAATGGGACTAGCATTACCTGGCATGGGAGGTCCAGGGCCAGTGGGAACTCCGGACATCCCTCTTGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp GACTTGAGGTTCCCCGAGGGCGAGCCCAGCATTGGTGACTGGACTTaGTGCATCGTGGGAGACTTCAGAGGGTTAATGCCTGGGGAATGC +
Preference number: 5 (lower is better)
Translates to: DLRFPEGEPSIGDWT*CIVGDFRGLMPGEC
Trigger: GCATTCCCCAGGCATTAACCCTCTGAAGTCTCCCACGATGCACCAAGTCCAGTCACCAATGCTGGGCTCGCCCTCGGGGAACCTCAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS-3UTR CAA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGGGGGTGCTTTATGGTTaGGAGGGATCCCAGGACTCT +
Preference number: 5 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARGVLYG*EGSQDS
Trigger: AGAGTCCTGGGATCCCTCCAAACCATAAAGCACCCC...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS GCA 90 bp ACTTGGTGCATCGTGGGAGACTTCAGAGGGTTAATGCCTGGGGAATaGACCTGGCTGCCTGCCACAGATATATCCAAGGGCTTCCGCCCC +
Preference number: 5 (lower is better)
Translates to: TWCIVGDFRGLMPGE*TWLPATDISKGFRP
Trigger: GGGGCGGAAGCCCTTGGATATATCTGTGGCAGGCAGCCAGGTGCATTCCCCAGGCATTAACCCTCTGAAGTCTCCCACGATGCACCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS-3UTR CAA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCGGGGGTGCGGCAGGCTaGGGTGCTGGTGCCGGAATG +
Preference number: 5 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSGGAAG*GAGAGM
Trigger: CATTCCGGCACCAGCACCCAAGCCTGCCGCACCCCC...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS GCA 90 bp AGGGTTGGGGACATTCGGCCCTTCCATTTCAGAGTTTATCATGCCTaGAAATCCAGGGAGGCGCATCTGGCTCCCTGGCATGTTGGGGTG +
Preference number: 5 (lower is better)
Translates to: RVGDIRPFHFRVYHA*KSREAHLAPWHVGV
Trigger: CACCCCAACATGCCAGGGAGCCAGATGCGCCTCCCTGGATTTGCAGGCATGATAAACTCTGAAATGGAAGGGCCGAATGTCCCCAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp CTCAGGTATTCCGGTGGCTCCAGGTCGGATGACCTCCTGCAGATCTaGGTCTGTAAACACCGAAGGCATGCTGTTCCCCAGGACAGTGAA +
Preference number: 5 (lower is better)
Translates to: LRYSGGSRSDDLLQI*VCKHRRHAVPQDSE
Trigger: TTCACTGTCCTGGGGAACAGCATGCCTTCGGTGTTTACAGACCCAGATCTGCAGGAGGTCATCCGACCTGGAGCCACCGGAATACCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp GGTGAGGTCCCATCATGCCTTGTTGGAGAAAGGCTGGTGGTCTCATaGGGTTGTGGCCTGGCATGGATGGAGCTGTACCAAGAGGGATGT +
Preference number: 5 (lower is better)
Translates to: GEVPSCLVGERLVVS*GCGLAWMELYQEGC
Trigger: ACATCCCTCTTGGTACAGCTCCATCCATGCCAGGCCACAACCCCATGAGACCACCAGCCTTTCTCCAACAAGGCATGATGGGACCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp CATCCGATGGTGAGGTCCCATCATGCCTTGTTGGAGAAAGGCTGGTaGTCTCATGGGGTTGTGGCCTGGCATGGATGGAGCTGTACCAAG +
Preference number: 5 (lower is better)
Translates to: HPMVRSHHALLEKGW*SHGVVAWHGWSCTK
Trigger: CTTGGTACAGCTCCATCCATGCCAGGCCACAACCCCATGAGACCACCAGCCTTTCTCCAACAAGGCATGATGGGACCTCACCATCGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp CATCATCCGATGGTGAGGTCCCATCATGCCTTGTTGGAGAAAGGCTaGTGGTCTCATGGGGTTGTGGCCTGGCATGGATGGAGCTGTACC +
Preference number: 5 (lower is better)
Translates to: HHPMVRSHHALLEKG*WSHGVVAWHGWSCT
Trigger: GGTACAGCTCCATCCATGCCAGGCCACAACCCCATGAGACCACCAGCCTTTCTCCAACAAGGCATGATGGGACCTCACCATCGGATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp AGAGGGCATCTGATTGGAGTGAGAAAGTGGCTGGGTCATTCCCATTaGGCTGAGGGTTGGCATCGGAACCACGGGGTTTGGACCTGGCAT +
Preference number: 5 (lower is better)
Translates to: RGHLIGVRKWLGHSH*AEGWHRNHGVWTWH
Trigger: ATGCCAGGTCCAAACCCCGTGGTTCCGATGCCAACCCTCAGCCCAATGGGAATGACCCAGCCACTTTCTCACTCCAATCAGATGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683836.1
CDS-3UTR CAA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTGGCTCCCTGGCATGTaGGGGTGGGGAGCCATGCCC +
Preference number: 5 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIWLPGM*GWGAMP
Trigger: GGGCATGGCTCCCCACCCCAACATGCCAGGGAGCCA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCGAAGCCCATCCGTCCTaGAGGTACCATCGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: QSQEDARHGRRGFARFISEAHPS*RYHRWL
Trigger: GAGCCACCGATGGTACCTCAAGGACGGATGGGCTTC...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGACCTGGAATCTCATCTaGACAAGGATCGGCACATCC +
Preference number: 5 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARTWNLI*TRIGTS
Trigger: GGATGTGCCGATCCTTGTCAAGATGAGATTCCAGGT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS TCA 90 bp GCCATCTCAGTAGAAAACACGTACACCACTTTGGCTGGAGTCTTCTaGGCAGGTGTGGGCTCTGTGGCAGTAGTTTGGCCATGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: AISVENTYTTLAGVF*AGVGSVAVVWPWEG
Trigger: CCCCTCCCATGGCCAAACTACTGCCACAGAGCCCACACCTGCTCAGAAGACTCCAGCCAAAGTGGTGTACGTGTTTTCTACTGAGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS TCA 90 bp GGCTGGCCGGGCATTGTAGATTGTGCTGGTGACATCATCCGATGGTaGGGTCCCATCATGCCTTGTTGGAGAAAGGCTGGTGGTCTCATG +
Preference number: 5 (lower is better)
Translates to: GWPGIVDCAGDIIRW*GPIMPCWRKAGGLM
Trigger: CATGAGACCACCAGCCTTTCTCCAACAAGGCATGATGGGACCTCACCATCGGATGATGTCACCAGCACAATCTACAATGCCCGGCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 90 bp CCCTGGGGCTGTTTACGGCCTGGAACTTCCCCTCGAGGGAAATATTaGAGCGTCTGGCTGGGCTTCTCAGATGGAATAATGCGGGATAGA +
Preference number: 5 (lower is better)
Translates to: PWGCLRPGTSPRGKY*SVWLGFSDGIMRDR
Trigger: TCTATCCCGCATTATTCCATCTGAGAAGCCCAGCCAGACGCTGCAATATTTCCCTCGAGGGGAAGTTCCAGGCCGTAAACAGCCCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS-3UTR CAA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGATTGAAATCCTGAGCTaGCAGTCACAAACGGGACAG +
Preference number: 5 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARIEILS*QSQTGQ
Trigger: CTGTCCCGTTTGTGACTGCAAGCTCAGGATTTCAAT...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS TCA 90 bp GCATCTGATTGGAGTGAGAAAGTGGCTGGGTCATTCCCATTGGGCTaGGGGTTGGCATCGGAACCACGGGGTTTGGACCTGAAATTCGAG +
Preference number: 5 (lower is better)
Translates to: ASDWSEKVAGSFPLG*GLASEPRGLDLKFE
Trigger: CTCGAATTTCAGGTCCAAACCCCGTGGTTCCGATGCCAACCCTCAGCCCAATGGGAATGACCCAGCCACTTTCTCACTCCAATCAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234739.8
ENST00000684121.1
CDS CCA 90 bp TGCAGTTTCAGCCACGCTATCTGCTCGGGAGTCATATGGTCAAGGTaGTCGGGTCCTATGGTCCCAGACTGGGAGTTCATAGAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: CSFSHAICSGVIWSR*SGPMVPDWEFIEGG
Trigger: TCCACCTTCTATGAACTCCCAGTCTGGGACCATAGGACCCGACCACCTTGACCATATGACTCCCGAGCAGATAGCGTGGCTGAAACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp AACTCCTGCTGCAGTTTCAGCCACGCTATCTGCTCGGGAGTCATATaGTCAAGGTGGTCGGGTCCTATGGTCCCAGACTGGGAGTTCATA +
Preference number: 5 (lower is better)
Translates to: NSCCSFSHAICSGVI*SRWSGPMVPDWEFI
Trigger: TATGAACTCCCAGTCTGGGACCATAGGACCCGACCACCTTGACCATATGACTCCCGAGCAGATAGCGTGGCTGAAACTGCAGCAGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp TCAACTGGTATTCGAGGGAAAATGGGGTTATTCCCAGGCTCCATGTaGCGCTGGGAGCCTGGAATCATCCTGTTCATCTCCATGCTGGGC +
Preference number: 5 (lower is better)
Translates to: STGIRGKMGLFPGSM*RWEPGIILFISMLG
Trigger: GCCCAGCATGGAGATGAACAGGATGATTCCAGGCTCCCAGCGCCACATGGAGCCTGGGAATAACCCCATTTTCCCTCGAATACCAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp GAACCACGGGGTTTGGACCTGGCATATTATTCATTGATGGCAAGTTaGGAGAACGAGCTGGAGGGGAGTCGTCATCTGAGCTGGCCACAG +
Preference number: 5 (lower is better)
Translates to: EPRGLDLAYYSLMAS*ENELEGSRHLSWPQ
Trigger: CTGTGGCCAGCTCAGATGACGACTCCCCTCCAGCTCGTTCTCCCAACTTGCCATCAATGAATAATATGCCAGGTCCAAACCCCGTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683836.1
CDS-3UTR CAA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTGCACTGGCCCACTGCTaGCTGGGTGCGTCCCTTAGC +
Preference number: 5 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGALAHC*LGASLS
Trigger: GCTAAGGGACGCACCCAGCAAGCAGTGGGCCAGTGC...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGGCTTCTGCAGCTTTATaGGCCATCTCAGTAGAAAAC +
Preference number: 5 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARASAAL*AISVEN
Trigger: GTTTTCTACTGAGATGGCCAATAAAGCTGCAGAAGC...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCCCGGAATGGGTGGAGTaGGCTGCAGTCTGGTATTCT +
Preference number: 5 (lower is better)
Translates to: QSQEDARHGRRGFARFISPEWVE*AAVWYS
Trigger: AGAATACCAGACTGCAGCCAACTCCACCCATTCCGG...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS TCA 90 bp ATTGCTCATCAGGGTGGGCTGGCCGGGCATTGTAGATTGTGCTGGTaGCATCATCCGATGGTGAGGTCCCATCATGCCTTGTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: IAHQGGLAGHCRLCW*HHPMVRSHHALLEK
Trigger: TTTCTCCAACAAGGCATGATGGGACCTCACCATCGGATGATGTCACCAGCACAATCTACAATGCCCGGCCAGCCCACCCTGATGAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS TCA 90 bp GCATCTGATTGGAGTGAGAAAGTGGCTGGGTCATTCCCATTGGGCTaGGGGTTGGCATCGGAACCACGGGGTTTGGACCTGGCATATTAT +
Preference number: 5 (lower is better)
Translates to: ASDWSEKVAGSFPLG*GLASEPRGLDLAYY
Trigger: ATAATATGCCAGGTCCAAACCCCGTGGTTCCGATGCCAACCCTCAGCCCAATGGGAATGACCCAGCCACTTTCTCACTCCAATCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683836.1
CDS-3UTR CAA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACGGTCTAGATGCAGGGTaGGGGACATTCGGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: HTENGATHDRWQFSKHSYGLDAG*GTFGPS
Trigger: GGAAGGGCCGAATGTCCCCAACCCTGCATCTAGACC...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCACAATCCTTGGGGGTTaGGGAAGCGTTCCCCTCGGC +
Preference number: 5 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAITILGG*GSVPLG
Trigger: GCCGAGGGGAACGCTTCCCAAACCCCCAAGGATTGT...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCGGAAGTGATGGAGACTaGAGGTGGACAGGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: QSQEDARHGRRGFARFISGSDGD*RWTGEA
Trigger: TGCTTCACCTGTCCACCTCAAGTCTCCATCACTTCC...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS CCA 90 bp TGTTGGGAGTTGAGTTGGGCCCAGTACCATCTGGGGGCAGTGGAGTaGAGCTGGCAGGACTTCCTACAGAAGGAATCAGTTTGTTTTCTA +
Preference number: 5 (lower is better)
Translates to: CWELSWAQYHLGAVE*SWQDFLQKESVCFL
Trigger: TAGAAAACAAACTGATTCCTTCTGTAGGAAGTCCTGCCAGCTCCACTCCACTGCCCCCAGATGGTACTGGGCCCAACTCAACTCCCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp GGAGGGGAGTCGTCATCTGAGCTGGCCACAGTCTTGATAGCATCATaGTATAACGGGGTGGAACTGGGCATTGCAAACTTGGACATTCGA +
Preference number: 5 (lower is better)
Translates to: GGESSSELATVLIAS*YNGVELGIANLDIR
Trigger: TCGAATGTCCAAGTTTGCAATGCCCAGTTCCACCCCGTTATACCATGATGCTATCAAGACTGTGGCCAGCTCAGATGACGACTCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 90 bp AGGATCGGCACATCCCATCTTAGCAGCTTAAAACATCATGTTTCCTaGGTTGCCAGGTCCTTGGCTAAATCCACCCATGCCCACGTCAGC +
Preference number: 5 (lower is better)
Translates to: RIGTSHLSSLKHHVS*VARSLAKSTHAHVS
Trigger: GCTGACGTGGGCATGGGTGGATTTAGCCAAGGACCTGGCAACCCAGGAAACATGATGTTTTAAGCTGCTAAGATGGGATGTGCCGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS-3UTR CAA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCGTGGGTCCTTTCCCCTaGCAGCTCCAGCATTCTCTG +
Preference number: 5 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIVGPFP*QLQHSL
Trigger: CAGAGAATGCTGGAGCTGCAAGGGGAAAGGACCCAC...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGTATGGCCCCCACTCTaGGAGTCACAGGGGGATGGC +
Preference number: 5 (lower is better)
Translates to: KGRKHTENGATHDRWQFSVWPPL*ESQGDG
Trigger: GCCATCCCCCTGTGACTCCAAGAGTGGGGGCCATAC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCGCTCCCTTTTCCCCTaGCCCTTGGCACCATTTCCA +
Preference number: 5 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIRSLFP*PLAPFP
Trigger: TGGAAATGGTGCCAAGGGCAAGGGGAAAAGGGAGCG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp CAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGCTTTGCTAGATTTATTTCCTGTCAGAGTCATCGTTaGGAGTCCCAGGATCTCTCT +
Preference number: 5 (lower is better)
Translates to: QSQEDARHGRRGFARFISCQSHR*ESQDLS
Trigger: AGAGAGATCCTGGGACTCCAAACGATGACTCTGACA...GGAAATAAATCTAGCAAAGCCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AGGACAGACCTTTCCCTCTCAGAGCCAAGAGGACGCTCGGCATGGAAGGCGAGGGAGTTGGATCCCATGTaGACATTTAGATTGACATCT +
Preference number: 5 (lower is better)
Translates to: RTDLSLSEPRGRSAWKARELDPM*TFRLTS
Trigger: AGATGTCAATCTAAATGTCAACATGGGATCCAACTC...CCTCGCCTTCCATGCCGAGCGTCCTCTTGGCTCTGAGAGGGAAAGGTCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCACTGGAGGAGCTGTGTaGAGGCTGGTGGGGTTACTG +
Preference number: 5 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAITGGAV*RLVGLL
Trigger: CAGTAACCCCACCAGCCTCAACACAGCTCCTCCAGT...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCTGGGTTGCCAGGTCCTaGGCTAAATCCACCCATGCC +
Preference number: 5 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSWVARS*AKSTHA
Trigger: GGCATGGGTGGATTTAGCCAAGGACCTGGCAACCCA...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS CCA 90 bp AGCTTTATTGGCCATCTCAGTAGAAAACACGTACACCACTTTGGCTaGAGTCTTCTGAGCAGGTGTGGGCTCTGTGGCAGTAGTTTGGCC +
Preference number: 5 (lower is better)
Translates to: SFIGHLSRKHVHHFG*SLLSRCGLCGSSLA
Trigger: GGCCAAACTACTGCCACAGAGCCCACACCTGCTCAGAAGACTCCAGCCAAAGTGGTGTACGTGTTTTCTACTGAGATGGCCAATAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS-3UTR CAA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCCGAGTTCCTCTCGGGTaGCAGCAGAAACAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCRVPLG*QQKQLL
Trigger: CAGCAGCTGTTTCTGCTGCAACCCGAGAGGAACTCG...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTTGTTGGGAGTTGAGTaGGGCCCAGTACCATCTGGG +
Preference number: 5 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAILLGVE*GPVPSG
Trigger: CCCAGATGGTACTGGGCCCAACTCAACTCCCAACAA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTTGGGTCCCACGGCATTaGGAGAGGGCATCTGATTGG +
Preference number: 5 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGWVPRH*ERASDW
Trigger: CCAATCAGATGCCCTCTCCAAATGCCGTGGGACCCA...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTCCCTCGAGGGAAATATaGCAGCGTCTGGCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGPSREI*QRLAGL
Trigger: AAGCCCAGCCAGACGCTGCAATATTTCCCTCGAGGG...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGGTGGTCTCATGGGGTaGTGGCCTGGCATGGATGGA +
Preference number: 5 (lower is better)
Translates to: KGRKHTENGATHDRWQFSGGLMG*WPGMDG
Trigger: TCCATCCATGCCAGGCCACAACCCCATGAGACCACC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGGTCCCATCATGCCTaGTTGGAGAAAGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: HTENGATHDRWQFSKHSYRSHHA*LEKGWW
Trigger: CCACCAGCCTTTCTCCAACAAGGCATGATGGGACCT...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS CCA 90 bp CTTTGTGCTCCTGTGAATTCTTTCTCATCAGGAAAAAGCATGCGCTaGATATCTCTGAGAGTTTGTAAGGAGCGCTCCCGGTGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LCAPVNSFSSGKSMR*ISLRVCKERSRCSS
Trigger: GCTGGAGCACCGGGAGCGCTCCTTACAAACTCTCAGAGATATCCAGCGCATGCTTTTTCCTGATGAGAAAGAATTCACAGGAGCACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS-3UTR CAA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCCCCTATTGTTGGGAGTaGAGTTGGGCCCAGTACCAT +
Preference number: 5 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIPYCWE*SWAQYH
Trigger: ATGGTACTGGGCCCAACTCAACTCCCAACAATAGGG...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTGTCACTGCCCTATTGTaGGGAGTTGAGTTGGGCCCA +
Preference number: 5 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGVTALL*GVELGP
Trigger: TGGGCCCAACTCAACTCCCAACAATAGGGCAGTGAC...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGGGGTCACTGCCCTATaGTTGGGAGTTGAGTTGGGC +
Preference number: 5 (lower is better)
Translates to: KGRKHTENGATHDRWQFSGVTAL*LGVELG
Trigger: GCCCAACTCAACTCCCAACAATAGGGCAGTGACCCC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCATCTGCTGAAGAGCTATaGCTCCCCTGGGAGACAGGG +
Preference number: 5 (lower is better)
Translates to: KGRKHTENGATHDRWQFSSAEEL*LPWETG
Trigger: CCCTGTCTCCCAGGGGAGCAATAGCTCTTCAGCAGA...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACCTGCGGTCCCCCACTTaGTGCTCCTGTGAATTCTTT +
Preference number: 5 (lower is better)
Translates to: HTENGATHDRWQFSKHSYLRSPT*CSCEFF
Trigger: AAAGAATTCACAGGAGCACAAAGTGGGGGACCGCAG...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCTCTTCAGACAATCCTaGGGGGTTTGGGAAGCGTTC +
Preference number: 5 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSLFRQS*GVWEAF
Trigger: GAACGCTTCCCAAACCCCCAAGGATTGTCTGAAGAG...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCGGGTGGAACTGGGCATaGCAAACTTGGACATTCGAG +
Preference number: 5 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSGWNWA*QTWTFE
Trigger: CTCGAATGTCCAAGTTTGCAATGCCCAGTTCCACCC...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTTCATTGATGGCAAGTaGGGAGAACGAGCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAIFIDGK*GERAGG
Trigger: CCCTCCAGCTCGTTCTCCCAACTTGCCATCAATGAA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCAAAAGTAGGTGCCATCTCCCATCATGCCTTGTaGGAGAAAGGCTGGTGGTCT +
Preference number: 5 (lower is better)
Translates to: DRWQFSKHSYRFPKVGAISHHAL*EKGWWS
Trigger: AGACCACCAGCCTTTCTCCAACAAGGCATGATGGGA...GATGGCACCTACTTTTGGGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS CCA 90 bp AAGGTGGTCGGGTCCTATGGTCCCAGACTGGGAGTTCATAGAAGGTaGAACCATTTCATCTGGAGAAAAGGGTACATCTCTATGTCCTTG +
Preference number: 5 (lower is better)
Translates to: KVVGSYGPRLGVHRR*NHFIWRKGYISMSL
Trigger: CAAGGACATAGAGATGTACCCTTTTCTCCAGATGAAATGGTTCCACCTTCTATGAACTCCCAGTCTGGGACCATAGGACCCGACCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS-3UTR CAA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACTACATCTCTATGTCCTaGAGGGCCAAATGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: HTENGATHDRWQFSKHSYYISMS*RAKWSS
Trigger: GGAGCTCCATTTGGCCCTCAAGGACATAGAGATGTA...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTTCTGAAGGGGAGGTTTaGGAGAAGAGGTCCATCCAG +
Preference number: 5 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGSEGEV*EKRSIQ
Trigger: CTGGATGGACCTCTTCTCCAAAACCTCCCCTTCAGA...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCTCGGAACCACGGGGTTaGGACCTGAAATTCGAGGAT +
Preference number: 5 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCSEPRG*DLKFED
Trigger: ATCCTCGAATTTCAGGTCCAAACCCCGTGGTTCCGA...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTGATCATGATGTTCTGTaGGGGTCCCATCATGCCCTG +
Preference number: 5 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGDHDVL*GSHHAL
Trigger: CAGGGCATGATGGGACCCCAACAGAACATCATGATC...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS TCA 90 bp CATTCTTTAATGTCAGAGTCATCGTTTGGAGTCCCAGGATCTCTCTaGTCAAAGGAGTCGGCGGAAATACTTCGCTCCCTTTTCCCCTTG +
Preference number: 5 (lower is better)
Translates to: HSLMSESSFGVPGSL*SKESAEILRSLFPL
Trigger: CAAGGGGAAAAGGGAGCGAAGTATTTCCGCCGACTCCTTTGATCAGAGAGATCCTGGGACTCCAAACGATGACTCTGACATTAAAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234739.8
ENST00000683836.1
CDS CCA 90 bp GACACGGAAGAACTTTCCAAAAATGATCTCTGCCACCCAATCAGATaGGAATGTTTAGGTCAAAGCAGAATGACGCCAACTGGGCCCACA +
Preference number: 5 (lower is better)
Translates to: DTEELSKNDLCHPIR*ECLGQSRMTPTGPT
Trigger: TGTGGGCCCAGTTGGCGTCATTCTGCTTTGACCTAAACATTCCCATCTGATTGGGTGGCAGAGATCATTTTTGGAAAGTTCTTCCGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000497938.1
ENST00000683836.1
CDS CCA 90 bp TATGGTCCCAGACTGGGAGTTCATAGAAGGTGGAACCATTTCATCTaGAGAAAAGGGTACATCTCTATGTCCTTGAGGGCCAAATGGAGC +
Preference number: 5 (lower is better)
Translates to: YGPRLGVHRRWNHFI*RKGYISMSLRAKWS
Trigger: GCTCCATTTGGCCCTCAAGGACATAGAGATGTACCCTTTTCTCCAGATGAAATGGTTCCACCTTCTATGAACTCCCAGTCTGGGACCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS-3UTR CAA 90 bp AAGATGGATTCTCCACCTAAAGTAAACAGCCCAGCATTCCTGTTCTCCTCTTGCGACCATCTGGGATTTTaGGCACATCATCTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: KMDSPPKVNSPAFLFSSCDHLGF*AHHLAN
Trigger: GTTGGCCAGATGATGTGCCAAAAATCCCAGATGGTC...GCAAGAGGAGAACAGGAATGCTGGGCTGTTTACTTTAGGTGGAGAATCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTCAGTGGGTTGGTATATaGGGAGACAAGACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGQWVGI*GDKTVL
Trigger: CAGCACTGTCTTGTCTCCCAATATACCAACCCACTG...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCCTGGGCATTGCAAACTaGGACATTCGAGACATCATA +
Preference number: 5 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSLGIAN*DIRDII
Trigger: TATGATGTCTCGAATGTCCAAGTTTGCAATGCCCAG...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTATCATGTTTCCTGGGTaGCCAGGTCCTTGGCTAAAT +
Preference number: 5 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGIMFPG*PGPWLN
Trigger: ATTTAGCCAAGGACCTGGCAACCCAGGAAACATGAT...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACAGATTCCGGTTACTGGAATGCATaGATTGAAATCCTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: RTVQHMTDGNSQSTATDSGYWNA*IEILSL
Trigger: CAAGCTCAGGATTTCAATCAATGCATTCCAGTAACC...GGAATCTGTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAGAGCTGGCCACAGTCTaGATAGCATCATGGTATAAC +
Preference number: 5 (lower is better)
Translates to: KGRKHTENGATHDRWQFSELATV*IASWYN
Trigger: GTTATACCATGATGCTATCAAGACTGTGGCCAGCTC...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACCTGGCATATTATTCATaGATGGCAAGTTGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: HTENGATHDRWQFSKHSYLAYYS*MASWEN
Trigger: GTTCTCCCAACTTGCCATCAATGAATAATATGCCAG...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp GAAAAGAATCCTGGGAGAAGCCAGTCCAAAGGACGTAAACATACAGAGAACGGTATGGAAGGCGAGGCTTaGCTAGATTTATTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: EKNPGRSQSKGRKHTENGMEGEA*LDLFPQ
Trigger: TTGGGGAAATAAATCTAGCAAAGCCTCGCCTTCCAT...ACCGTTCTCTGTATGTTTACGTCCTTTGGACTGGCTTCTCCCAGGATTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp CATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAGCACAGCTACCTTCTCTCTGTCTTGTaGTTAGAAATGTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: HTENGATHDRWQFSKHSYLLSVL*LEMFWM
Trigger: CATCCAGAACATTTCTAACAACAAGACAGAGAGAAG...GTAGCTGTGCTTTGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS-3UTR CAA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAAAATGTGCCAGTGGGTaGGTATATTGGGAGACAAGA +
Preference number: 5 (lower is better)
Translates to: KGRKHTENGATHDRWQFSKCASG*VYWETR
Trigger: TCTTGTCTCCCAATATACCAACCCACTGGCACATTT...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS GCA 90 bp TTTCTTCTACATCGGGACACGGAAGAACTTTCCAAAAATGATCTCTaGCACCCAATCAGATGGGAATGTTTAGGTCAAAGCAGAATGACG +
Preference number: 5 (lower is better)
Translates to: FLLHRDTEELSKNDL*HPIRWECLGQSRMT
Trigger: CGTCATTCTGCTTTGACCTAAACATTCCCATCTGATTGGGTGGCAGAGATCATTTTTGGAAAGTTCTTCCGTGTCCCGATGTAGAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000497938.1
ENST00000683836.1
CDS TCA 90 bp TTTGCTATTTCTTCTACATCGGGACACGGAAGAACTTTCCAAAAATaGTCTCTGCCACCCAATCAGATGGGAATGTTTAGGTCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: FAISSTSGHGRTFQK*SLPPNQMGMFRSKQ
Trigger: CTGCTTTGACCTAAACATTCCCATCTGATTGGGTGGCAGAGATCATTTTTGGAAAGTTCTTCCGTGTCCCGATGTAGAAGAAATAGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000497938.1
ENST00000683836.1
CDS-3UTR CAA 90 bp AAAGGACGTAAACATACAGAGAACGGTGCAACACATGACCGATGGCAATTCTCAATGTTGACATTTAGATaGACATCTCCCTTCATCCCA +
Preference number: 5 (lower is better)
Translates to: KGRKHTENGATHDRWQFSMLTFR*TSPFIP
Trigger: TGGGATGAAGGGAGATGTCAATCTAAATGTCAACAT...TGAGAATTGCCATCGGTCATGTGTTGCACCGTTCTCTGTATGTTTACGTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234739.8
CDS GCA 72 bp CAGGGTGGGTGTAGAGCCCGGCAGGCCCCCGATCCTTaGCAGGAATCATGCCCACGGCAGCAGCTGGATTGC +
Preference number: 6 (lower is better)
Translates to: QGGCRARQAPDP*QESCPRQQLDC
Trigger: GCAATCCAGCTGCTGCCGTGGGCATGATTCCTGGCAAGGATCGGGGGCCTGCCGGGCTCTACACCCACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp AGCTGCTGGGGGCAGTGGCACTGGCCCACTGCTTGCTaGGTGCGTCCCTTAGCGCTCGCTGCCTGTATGCCT +
Preference number: 6 (lower is better)
Translates to: SCWGQWHWPTAC*VRPLALAACMP
Trigger: AGGCATACAGGCAGCGAGCGCTAAGGGACGCACCCAGCAAGCAGTGGGCCAGTGCCACTGCCCCCAGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 72 bp CAGGGGACGTGGGGGTGCGGCAGGCTTGGGTGCTGGTaGCGGAATGGGTGGAGTTGGCTGCAGTCTGGTATT +
Preference number: 6 (lower is better)
Translates to: QGTWGCGRLGCW*RNGWSWLQSGI
Trigger: AATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCACCCCCACGTCCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GCTCCTGAGATAGGCCATCGGGATTCTCTCCCAGTGTaGGGGGCTCGCCACTGGACACTGGTGGAGGCGGAG +
Preference number: 6 (lower is better)
Translates to: APEIGHRDSLPV*GARHWTLVEAE
Trigger: CTCCGCCTCCACCAGTGTCCAGTGGCGAGCCCCCCACACTGGGAGAGAATCCCGATGGCCTATCTCAGGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp ACCGAGTTCCTCTCGGGTTGCAGCAGAAACAGCTGCTaGGGGCAGTGGCACTGGCCCACTGCTTGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: TEFLSGCSRNSC*GQWHWPTACWV
Trigger: CACCCAGCAAGCAGTGGGCCAGTGCCACTGCCCCCAGCAGCTGTTTCTGCTGCAACCCGAGAGGAACTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GGGTCCCATCATGCCCTGCATGGACATCATCATGCCTaGAGAGCCCACAGGCCCAGGGTGGGTGTAGAGCCC +
Preference number: 6 (lower is better)
Translates to: GSHHALHGHHHA*RAHRPRVGVEP
Trigger: GGGCTCTACACCCACCCTGGGCCTGTGGGCTCTCCAGGCATGATGATGTCCATGCAGGGCATGATGGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 90 bp GGCCCCCGATCCTTGCCAGGAATCATGCCCACGGCAGCAGCTGGATaGCTCATCAGGGTGGGCTGGCCGGGCATTGTAGATTGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: GPRSLPGIMPTAAAG*LIRVGWPGIVDCAG
Trigger: ACCAGCACAATCTACAATGCCCGGCCAGCCCACCCTGATGAGCAATCCAGCTGCTGCCGTGGGCATGATTCCTGGCAAGGATCGGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 90 bp GTGGGGGTGCGGCAGGCTTGGGTGCTGGTGCCGGAATGGGTGGAGTaGGCTGCAGTCTGGTATTCTGGGAAGAATTCTGGTCCTGGTTGG +
Preference number: 6 (lower is better)
Translates to: VGVRQAWVLVPEWVE*AAVWYSGKNSGPGW
Trigger: CCAACCAGGACCAGAATTCTTCCCAGAATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCACCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS TCA 72 bp GGACTTGAGGTTCCCCGAGGGCGAGCCCAGCATTGGTaGCTGGACTTGGTGCATCGTGGGAGACTTCAGAGG +
Preference number: 6 (lower is better)
Translates to: GLEVPRGRAQHW*LDLVHRGRLQR
Trigger: CCTCTGAAGTCTCCCACGATGCACCAAGTCCAGTCACCAATGCTGGGCTCGCCCTCGGGGAACCTCAAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 72 bp CCCGAGGGCGAGCCCAGCATTGGTGACTGGACTTGGTaGATCGTGGGAGACTTCAGAGGGTTAATGCCTGGG +
Preference number: 6 (lower is better)
Translates to: PEGEPSIGDWTW*IVGDFRGLMPG
Trigger: CCCAGGCATTAACCCTCTGAAGTCTCCCACGATGCACCAAGTCCAGTCACCAATGCTGGGCTCGCCCTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 72 bp GTTGGGGTCCCATCATGCCCTGCATGGACATCATCATaGCTGGAGAGCCCACAGGCCCAGGGTGGGTGTAGA +
Preference number: 6 (lower is better)
Translates to: VGVPSCPAWTSS*LESPQAQGGCR
Trigger: TCTACACCCACCCTGGGCCTGTGGGCTCTCCAGGCATGATGATGTCCATGCAGGGCATGATGGGACCCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GAGTTTATCATGCCTGCAAATCCAGGGAGGCGCATCTaGCTCCCTGGCATGTTGGGGTGGGGAGCCATGCCC +
Preference number: 6 (lower is better)
Translates to: EFIMPANPGRRI*LPGMLGWGAMP
Trigger: GGGCATGGCTCCCCACCCCAACATGCCAGGGAGCCAGATGCGCCTCCCTGGATTTGCAGGCATGATAAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GGCTGGTGGTCTCATGGGGTTGTGGCCTGGCATGGATaGAGCTGTACCAAGAGGGATGTCCGGAGTTCCCAC +
Preference number: 6 (lower is better)
Translates to: GWWSHGVVAWHG*SCTKRDVRSSH
Trigger: GTGGGAACTCCGGACATCCCTCTTGGTACAGCTCCATCCATGCCAGGCCACAACCCCATGAGACCACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS TCA 72 bp CTGAGATTCCGCAAGCCACTGTTGCTGCCTGGACCCTaGGACATGGGAAGGAATGGTCTGGGGCCCATGCCA +
Preference number: 6 (lower is better)
Translates to: LRFRKPLLLPGP*DMGRNGLGPMP
Trigger: TGGCATGGGCCCCAGACCATTCCTTCCCATGTCTCAGGGTCCAGGCAGCAACAGTGGCTTGCGGAATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 72 bp GGATGTCCGGAGTTCCCACTGGCCCTGGACCTCCCATaGCAGGTAATGCTAGTCCCATTCTGGGGGCTTGTT +
Preference number: 6 (lower is better)
Translates to: GCPEFPLALDLP*QVMLVPFWGLV
Trigger: AACAAGCCCCCAGAATGGGACTAGCATTACCTGGCATGGGAGGTCCAGGGCCAGTGGGAACTCCGGACATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GGGTGCGGCAGGCTTGGGTGCTGGTGCCGGAATGGGTaGAGTTGGCTGCAGTCTGGTATTCTGGGAAGAATT +
Preference number: 6 (lower is better)
Translates to: GCGRLGCWCRNG*SWLQSGILGRI
Trigger: AATTCTTCCCAGAATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCCGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp AGACAGGGGTCACTGCCCTATTGTTGGGAGTTGAGTTaGGCCCAGTACCATCTGGGGGCAGTGGAGTGGAGC +
Preference number: 6 (lower is better)
Translates to: RQGSLPYCWELS*AQYHLGAVEWS
Trigger: GCTCCACTCCACTGCCCCCAGATGGTACTGGGCCCAACTCAACTCCCAACAATAGGGCAGTGACCCCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp TCCGCAAGCCACTGTTGCTGCCTGGACCCTGAGACATaGGAAGGAATGGTCTGGGGCCCATGCCATACTCCT +
Preference number: 6 (lower is better)
Translates to: SASHCCCLDPET*EGMVWGPCHTP
Trigger: AGGAGTATGGCATGGGCCCCAGACCATTCCTTCCCATGTCTCAGGGTCCAGGCAGCAACAGTGGCTTGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp TCCGGTGGCTCCAGGTCGGATGACCTCCTGCAGATCTaGGTCTGTAAACACCGAAGGCATGCTGTTCCCCAG +
Preference number: 6 (lower is better)
Translates to: SGGSRSDDLLQI*VCKHRRHAVPQ
Trigger: CTGGGGAACAGCATGCCTTCGGTGTTTACAGACCCAGATCTGCAGGAGGTCATCCGACCTGGAGCCACCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp CCCACGGCAGCAGCTGGATTGCTCATCAGGGTGGGCTaGCCGGGCATTGTAGATTGTGCTGGTGACATCATC +
Preference number: 6 (lower is better)
Translates to: PTAAAGLLIRVG*PGIVDCAGDII
Trigger: GATGATGTCACCAGCACAATCTACAATGCCCGGCCAGCCCACCCTGATGAGCAATCCAGCTGCTGCCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 72 bp GAGACAGGGGTCACTGCCCTATTGTTGGGAGTTGAGTaGGGCCCAGTACCATCTGGGGGCAGTGGAGTGGAG +
Preference number: 6 (lower is better)
Translates to: ETGVTALLLGVE*GPVPSGGSGVE
Trigger: CTCCACTCCACTGCCCCCAGATGGTACTGGGCCCAACTCAACTCCCAACAATAGGGCAGTGACCCCTGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS TCA 72 bp TGGAGTGAGAAAGTGGCTGGGTCATTCCCATTGGGCTaGGGGTTGGCATCGGAACCACGGGGTTTGGACCTG +
Preference number: 6 (lower is better)
Translates to: WSEKVAGSFPLG*GLASEPRGLDL
Trigger: CAGGTCCAAACCCCGTGGTTCCGATGCCAACCCTCAGCCCAATGGGAATGACCCAGCCACTTTCTCACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS TCA 72 bp CAGGGTGGGCTGGCCGGGCATTGTAGATTGTGCTGGTaGCATCATCCGATGGTGAGGTCCCATCATGCCTTG +
Preference number: 6 (lower is better)
Translates to: QGGLAGHCRLCW*HHPMVRSHHAL
Trigger: CAAGGCATGATGGGACCTCACCATCGGATGATGTCACCAGCACAATCTACAATGCCCGGCCAGCCCACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GTGCTGGTGCCGGAATGGGTGGAGTTGGCTGCAGTCTaGTATTCTGGGAAGAATTCTGGTCCTGGTTGGCCG +
Preference number: 6 (lower is better)
Translates to: VLVPEWVELAAV*YSGKNSGPGWP
Trigger: CGGCCAACCAGGACCAGAATTCTTCCCAGAATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GGCAGGCTTGGGTGCTGGTGCCGGAATGGGTGGAGTTaGCTGCAGTCTGGTATTCTGGGAAGAATTCTGGTC +
Preference number: 6 (lower is better)
Translates to: GRLGCWCRNGWS*LQSGILGRILV
Trigger: GACCAGAATTCTTCCCAGAATACCAGACTGCAGCCAACTCCACCCATTCCGGCACCAGCACCCAAGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GACTCAGAGGGCCCTCAACTGGTATTCGAGGGAAAATaGGGTTATTCCCAGGCTCCATGTGGCGCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: DSEGPQLVFEGK*GYSQAPCGAGS
Trigger: GCTCCCAGCGCCACATGGAGCCTGGGAATAACCCCATTTTCCCTCGAATACCAGTTGAGGGCCCTCTGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp TTCCCCGAGGGCGAGCCCAGCATTGGTGACTGGACTTaGTGCATCGTGGGAGACTTCAGAGGGTTAATGCCT +
Preference number: 6 (lower is better)
Translates to: FPEGEPSIGDWT*CIVGDFRGLMP
Trigger: AGGCATTAACCCTCTGAAGTCTCCCACGATGCACCAAGTCCAGTCACCAATGCTGGGCTCGCCCTCGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp TTGAGGTTCCCCGAGGGCGAGCCCAGCATTGGTGACTaGACTTGGTGCATCGTGGGAGACTTCAGAGGGTTA +
Preference number: 6 (lower is better)
Translates to: LRFPEGEPSIGD*TWCIVGDFRGL
Trigger: TAACCCTCTGAAGTCTCCCACGATGCACCAAGTCCAGTCACCAATGCTGGGCTCGCCCTCGGGGAACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp AAACCCAGGTCCAGGACCCTGGGGCTGTTTACGGCCTaGAACTTCCCCTCGAGGGAAATATTGCAGCGTCTG +
Preference number: 6 (lower is better)
Translates to: KPRSRTLGLFTA*NFPSREILQRL
Trigger: CAGACGCTGCAATATTTCCCTCGAGGGGAAGTTCCAGGCCGTAAACAGCCCCAGGGTCCTGGACCTGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GTGAGGTCCCATCATGCCTTGTTGGAGAAAGGCTGGTaGTCTCATGGGGTTGTGGCCTGGCATGGATGGAGC +
Preference number: 6 (lower is better)
Translates to: VRSHHALLEKGW*SHGVVAWHGWS
Trigger: GCTCCATCCATGCCAGGCCACAACCCCATGAGACCACCAGCCTTTCTCCAACAAGGCATGATGGGACCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 72 bp CTATTGCTCCCCTGGGAGACAGGGGTCACTGCCCTATaGTTGGGAGTTGAGTTGGGCCCAGTACCATCTGGG +
Preference number: 6 (lower is better)
Translates to: LLLPWETGVTAL*LGVELGPVPSG
Trigger: CCCAGATGGTACTGGGCCCAACTCAACTCCCAACAATAGGGCAGTGACCCCTGTCTCCCAGGGGAGCAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 72 bp GGTTTGGAGGGATCCCAGGACTCTGAAGGGGAGGTTTaGGAGAAGAGGTCCATCCAGGTGACGGGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: GLEGSQDSEGEV*EKRSIQVTGQE
Trigger: TTCCTGCCCCGTCACCTGGATGGACCTCTTCTCCAAAACCTCCCCTTCAGAGTCCTGGGATCCCTCCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 72 bp TCTCCAGGGCATACAAAACCCCAAGGGTCACGACACTaGAGTGCTCATCCTGGAGGTGAGGAGTCCAGGAAC +
Preference number: 6 (lower is better)
Translates to: SPGHTKPQGSRH*SAHPGGEESRN
Trigger: GTTCCTGGACTCCTCACCTCCAGGATGAGCACTGCAGTGTCGTGACCCTTGGGGTTTTGTATGCCCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000234739.8
ENST00000497938.1
ENST00000683836.1
ENST00000684121.1
CDS GCA 72 bp TGTTTTTCTCTGCTGTGGAAGTGGGTCCTTTCCCCTTaGAGCTCCAGCATTCTCTGGGTGCGTGCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: CFSLLWKWVLSP*SSSILWVRASC
Trigger: GCAGGAGGCACGCACCCAGAGAATGCTGGAGCTGCAAGGGGAAAGGACCCACTTCCACAGCAGAGAAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234739.8
ENST00000497938.1
ENST00000683836.1
ENST00000684121.1
CDS GCA 72 bp GGGATCATGATGTTCTGTTGGGGTCCCATCATGCCCTaGATGGACATCATCATGCCTGGAGAGCCCACAGGC +
Preference number: 6 (lower is better)
Translates to: GIMMFCWGPIMP*MDIIMPGEPTG
Trigger: GCCTGTGGGCTCTCCAGGCATGATGATGTCCATGCAGGGCATGATGGGACCCCAACAGAACATCATGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp AGAAAAGGGTACATCTCTATGTCCTTGAGGGCCAAATaGAGCTCCCACGTCTGTCCGGGGCCCAGGTCCCTT +
Preference number: 6 (lower is better)
Translates to: RKGYISMSLRAK*SSHVCPGPRSL
Trigger: AAGGGACCTGGGCCCCGGACAGACGTGGGAGCTCCATTTGGCCCTCAAGGACATAGAGATGTACCCTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp TGCAGTTTCAGCCACGCTATCTGCTCGGGAGTCATATaGTCAAGGTGGTCGGGTCCTATGGTCCCAGACTGG +
Preference number: 6 (lower is better)
Translates to: CSFSHAICSGVI*SRWSGPMVPDW
Trigger: CCAGTCTGGGACCATAGGACCCGACCACCTTGACCATATGACTCCCGAGCAGATAGCGTGGCTGAAACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GGAGACTTCAGAGGGTTAATGCCTGGGGAATGCACCTaGCTGCCTGCCACAGATATATCCAAGGGCTTCCGC +
Preference number: 6 (lower is better)
Translates to: GDFRGLMPGECT*LPATDISKGFR
Trigger: GCGGAAGCCCTTGGATATATCTGTGGCAGGCAGCCAGGTGCATTCCCCAGGCATTAACCCTCTGAAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp CTGATTGGAGTGAGAAAGTGGCTGGGTCATTCCCATTaGGCTGAGGGTTGGCATCGGAACCACGGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: LIGVRKWLGHSH*AEGWHRNHGVW
Trigger: CCAAACCCCGTGGTTCCGATGCCAACCCTCAGCCCAATGGGAATGACCCAGCCACTTTCTCACTCCAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp ATGGTGAGGTCCCATCATGCCTTGTTGGAGAAAGGCTaGTGGTCTCATGGGGTTGTGGCCTGGCATGGATGG +
Preference number: 6 (lower is better)
Translates to: MVRSHHALLEKG*WSHGVVAWHGW
Trigger: CCATCCATGCCAGGCCACAACCCCATGAGACCACCAGCCTTTCTCCAACAAGGCATGATGGGACCTCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 72 bp GCTGGAGGGGAGTCGTCATCTGAGCTGGCCACAGTCTaGATAGCATCATGGTATAACGGGGTGGAACTGGGC +
Preference number: 6 (lower is better)
Translates to: AGGESSSELATV*IASWYNGVELG
Trigger: GCCCAGTTCCACCCCGTTATACCATGATGCTATCAAGACTGTGGCCAGCTCAGATGACGACTCCCCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 90 bp AGGTGGAACCATTTCATCTGGAGAAAAGGGTACATCTCTATGTCCTaGAGGGCCAAATGGAGCTCCCACGTCTGTCCGGGGCCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: RWNHFIWRKGYISMS*RAKWSSHVCPGPRS
Trigger: GGACCTGGGCCCCGGACAGACGTGGGAGCTCCATTTGGCCCTCAAGGACATAGAGATGTACCCTTTTCTCCAGATGAAATGGTTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 90 bp GTGCTTTATGGTTTGGAGGGATCCCAGGACTCTGAAGGGGAGGTTTaGGAGAAGAGGTCCATCCAGGTGACGGGGCAGGAAGTGATGGAG +
Preference number: 6 (lower is better)
Translates to: VLYGLEGSQDSEGEV*EKRSIQVTGQEVME
Trigger: CTCCATCACTTCCTGCCCCGTCACCTGGATGGACCTCTTCTCCAAAACCTCCCCTTCAGAGTCCTGGGATCCCTCCAAACCATAAAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 90 bp CATCTTAGCAGCTTAAAACATCATGTTTCCTGGGTTGCCAGGTCCTaGGCTAAATCCACCCATGCCCACGTCAGCAGCCATGCCCCGGGG +
Preference number: 6 (lower is better)
Translates to: HLSSLKHHVSWVARS*AKSTHAHVSSHAPG
Trigger: CCCCGGGGCATGGCTGCTGACGTGGGCATGGGTGGATTTAGCCAAGGACCTGGCAACCCAGGAAACATGATGTTTTAAGCTGCTAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 72 bp ATCGTGGGAGACTTCAGAGGGTTAATGCCTGGGGAATaGACCTGGCTGCCTGCCACAGATATATCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: IVGDFRGLMPGE*TWLPATDISKG
Trigger: GCCCTTGGATATATCTGTGGCAGGCAGCCAGGTGCATTCCCCAGGCATTAACCCTCTGAAGTCTCCCACGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS GCA 72 bp GTGCTGGTGACATCATCCGATGGTGAGGTCCCATCATaGCTTGTTGGAGAAAGGCTGGTGGTCTCATGGGGT +
Preference number: 6 (lower is better)
Translates to: VLVTSSDGEVPS*LVGERLVVSWG
Trigger: ACCCCATGAGACCACCAGCCTTTCTCCAACAAGGCATGATGGGACCTCACCATCGGATGATGTCACCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp AGCCACGCTATCTGCTCGGGAGTCATATGGTCAAGGTaGTCGGGTCCTATGGTCCCAGACTGGGAGTTCATA +
Preference number: 6 (lower is better)
Translates to: SHAICSGVIWSR*SGPMVPDWEFI
Trigger: TATGAACTCCCAGTCTGGGACCATAGGACCCGACCACCTTGACCATATGACTCCCGAGCAGATAGCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GGGAAAATGGGGTTATTCCCAGGCTCCATGTGGCGCTaGGAGCCTGGAATCATCCTGTTCATCTCCATGCTG +
Preference number: 6 (lower is better)
Translates to: GKMGLFPGSMWR*EPGIILFISML
Trigger: CAGCATGGAGATGAACAGGATGATTCCAGGCTCCCAGCGCCACATGGAGCCTGGGAATAACCCCATTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp CCATCATGCCTTGTTGGAGAAAGGCTGGTGGTCTCATaGGGTTGTGGCCTGGCATGGATGGAGCTGTACCAA +
Preference number: 6 (lower is better)
Translates to: PSCLVGERLVVS*GCGLAWMELYQ
Trigger: TTGGTACAGCTCCATCCATGCCAGGCCACAACCCCATGAGACCACCAGCCTTTCTCCAACAAGGCATGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp AGAAAGTGGCTGGGTCATTCCCATTGGGCTGAGGGTTaGCATCGGAACCACGGGGTTTGGACCTGGCATATT +
Preference number: 6 (lower is better)
Translates to: RKWLGHSHWAEG*HRNHGVWTWHI
Trigger: AATATGCCAGGTCCAAACCCCGTGGTTCCGATGCCAACCCTCAGCCCAATGGGAATGACCCAGCCACTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683836.1
CDS CAA 72 bp TTGTTTTTCTCTGCTGTGGAAGTGGGTCCTTTCCCCTaGCAGCTCCAGCATTCTCTGGGTGCGTGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: LFFSAVEVGPFP*QLQHSLGACLL
Trigger: CAGGAGGCACGCACCCAGAGAATGCTGGAGCTGCAAGGGGAAAGGACCCACTTCCACAGCAGAGAAAAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000234739.8
ENST00000497938.1
ENST00000683836.1
ENST00000684121.1
CDS CAA 90 bp GGAGAACGAGCTGGAGGGGAGTCGTCATCTGAGCTGGCCACAGTCTaGATAGCATCATGGTATAACGGGGTGGAACTGGGCATTGCAAAC +
Preference number: 6 (lower is better)
Translates to: GERAGGESSSELATV*IASWYNGVELGIAN
Trigger: GTTTGCAATGCCCAGTTCCACCCCGTTATACCATGATGCTATCAAGACTGTGGCCAGCTCAGATGACGACTCCCCTCCAGCTCGTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 90 bp GGAACCACGGGGTTTGGACCTGGCATATTATTCATTGATGGCAAGTaGGGAGAACGAGCTGGAGGGGAGTCGTCATCTGAGCTGGCCACA +
Preference number: 6 (lower is better)
Translates to: GTTGFGPGILFIDGK*GERAGGESSSELAT
Trigger: TGTGGCCAGCTCAGATGACGACTCCCCTCCAGCTCGTTCTCCCAACTTGCCATCAATGAATAATATGCCAGGTCCAAACCCCGTGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683836.1
CDS TCA 72 bp CGGAACCACGGGGTTTGGACCTGGCATATTATTCATTaGTGGCAAGTTGGGAGAACGAGCTGGAGGGGAGTC +
Preference number: 6 (lower is better)
Translates to: RNHGVWTWHIIH*WQVGRTSWRGV
Trigger: GACTCCCCTCCAGCTCGTTCTCCCAACTTGCCATCAATGAATAATATGCCAGGTCCAAACCCCGTGGTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683836.1
CDS CCA 72 bp ATTGGAGAATTTGGAATCCAGCTGGGGGTTTCCAGATaGGGACATCACTGTAGGGGGACGGACCATCACCTC +
Preference number: 6 (lower is better)
Translates to: IGEFGIQLGVSR*GHHCRGTDHHL
Trigger: GAGGTGATGGTCCGTCCCCCTACAGTGATGTCCCCATCTGGAAACCCCCAGCTGGATTCCAAATTCTCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GGCCATCTCAGTAGAAAACACGTACACCACTTTGGCTaGAGTCTTCTGAGCAGGTGTGGGCTCTGTGGCAGT +
Preference number: 6 (lower is better)
Translates to: GHLSRKHVHHFG*SLLSRCGLCGS
Trigger: ACTGCCACAGAGCCCACACCTGCTCAGAAGACTCCAGCCAAAGTGGTGTACGTGTTTTCTACTGAGATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp TGGGCCCAGTACCATCTGGGGGCAGTGGAGTGGAGCTaGCAGGACTTCCTACAGAAGGAATCAGTTTGTTTT +
Preference number: 6 (lower is better)
Translates to: WAQYHLGAVEWS*QDFLQKESVCF
Trigger: AAAACAAACTGATTCCTTCTGTAGGAAGTCCTGCCAGCTCCACTCCACTGCCCCCAGATGGTACTGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp ATTCGAGGGAAAATGGGGTTATTCCCAGGCTCCATGTaGCGCTGGGAGCCTGGAATCATCCTGTTCATCTCC +
Preference number: 6 (lower is better)
Translates to: IRGKMGLFPGSM*RWEPGIILFIS
Trigger: GGAGATGAACAGGATGATTCCAGGCTCCCAGCGCCACATGGAGCCTGGGAATAACCCCATTTTCCCTCGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 72 bp CATTTCATCTGGAGAAAAGGGTACATCTCTATGTCCTaGAGGGCCAAATGGAGCTCCCACGTCTGTCCGGGG +
Preference number: 6 (lower is better)
Translates to: HFIWRKGYISMS*RAKWSSHVCPG
Trigger: CCCCGGACAGACGTGGGAGCTCCATTTGGCCCTCAAGGACATAGAGATGTACCCTTTTCTCCAGATGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS TCA 72 bp CTTTCTCATCAGGAAAAAGCATGCGCTGGATATCTCTaGGAGTTTGTAAGGAGCGCTCCCGGTGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: LSHQEKACAGYL*EFVRSAPGAPA
Trigger: AGCTGGAGCACCGGGAGCGCTCCTTACAAACTCTCAGAGATATCCAGCGCATGCTTTTTCCTGATGAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS TCA 72 bp CAGGATTCTGCTGCGGTCCCCCACTTTGTGCTCCTGTaGATTCTTTCTCATCAGGAAAAAGCATGCGCTGGA +
Preference number: 6 (lower is better)
Translates to: QDSAAVPHFVLL*ILSHQEKACAG
Trigger: TCCAGCGCATGCTTTTTCCTGATGAGAAAGAATTCACAGGAGCACAAAGTGGGGGACCGCAGCAGAATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS TCA 72 bp GCTGAGGGTTGGCATCGGAACCACGGGGTTTGGACCTaGAATTCGAGGATTCTGTGTATTAATGCCCATTCC +
Preference number: 6 (lower is better)
Translates to: AEGWHRNHGVWT*NSRILCINAHS
Trigger: GGAATGGGCATTAATACACAGAATCCTCGAATTTCAGGTCCAAACCCCGTGGTTCCGATGCCAACCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234739.8
ENST00000684121.1
CDS GCA 72 bp TGTTTACGGCCTGGAACTTCCCCTCGAGGGAAATATTaGAGCGTCTGGCTGGGCTTCTCAGATGGAATAATG +
Preference number: 6 (lower is better)
Translates to: CLRPGTSPRGKY*SVWLGFSDGIM
Trigger: CATTATTCCATCTGAGAAGCCCAGCCAGACGCTGCAATATTTCCCTCGAGGGGAAGTTCCAGGCCGTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GGTTTGGACCTGGCATATTATTCATTGATGGCAAGTTaGGAGAACGAGCTGGAGGGGAGTCGTCATCTGAGC +
Preference number: 6 (lower is better)
Translates to: GLDLAYYSLMAS*ENELEGSRHLS
Trigger: GCTCAGATGACGACTCCCCTCCAGCTCGTTCTCCCAACTTGCCATCAATGAATAATATGCCAGGTCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683836.1
CDS CAA 72 bp CTGTTTACGGCCTGGAACTTCCCCTCGAGGGAAATATaGCAGCGTCTGGCTGGGCTTCTCAGATGGAATAAT +
Preference number: 6 (lower is better)
Translates to: LFTAWNFPSREI*QRLAGLLRWNN
Trigger: ATTATTCCATCTGAGAAGCCCAGCCAGACGCTGCAATATTTCCCTCGAGGGGAAGTTCCAGGCCGTAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 72 bp AGCTTAAAACATCATGTTTCCTGGGTTGCCAGGTCCTaGGCTAAATCCACCCATGCCCACGTCAGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: SLKHHVSWVARS*AKSTHAHVSSH
Trigger: ATGGCTGCTGACGTGGGCATGGGTGGATTTAGCCAAGGACCTGGCAACCCAGGAAACATGATGTTTTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CAA 72 bp GGGTTTGGACCTGGCATATTATTCATTGATGGCAAGTaGGGAGAACGAGCTGGAGGGGAGTCGTCATCTGAG +
Preference number: 6 (lower is better)
Translates to: GFGPGILFIDGK*GERAGGESSSE
Trigger: CTCAGATGACGACTCCCCTCCAGCTCGTTCTCCCAACTTGCCATCAATGAATAATATGCCAGGTCCAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683836.1
CDS TCA 72 bp ATGTCAGAGTCATCGTTTGGAGTCCCAGGATCTCTCTaGTCAAAGGAGTCGGCGGAAATACTTCGCTCCCTT +
Preference number: 6 (lower is better)
Translates to: MSESSFGVPGSL*SKESAEILRSL
Trigger: AAGGGAGCGAAGTATTTCCGCCGACTCCTTTGATCAGAGAGATCCTGGGACTCCAAACGATGACTCTGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234739.8
ENST00000683836.1
CDS CCA 72 bp TCGTCATCTGAGCTGGCCACAGTCTTGATAGCATCATaGTATAACGGGGTGGAACTGGGCATTGCAAACTTG +
Preference number: 6 (lower is better)
Translates to: SSSELATVLIAS*YNGVELGIANL
Trigger: CAAGTTTGCAATGCCCAGTTCCACCCCGTTATACCATGATGCTATCAAGACTGTGGCCAGCTCAGATGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp GGGTCCTATGGTCCCAGACTGGGAGTTCATAGAAGGTaGAACCATTTCATCTGGAGAAAAGGGTACATCTCT +
Preference number: 6 (lower is better)
Translates to: GSYGPRLGVHRR*NHFIWRKGYIS
Trigger: AGAGATGTACCCTTTTCTCCAGATGAAATGGTTCCACCTTCTATGAACTCCCAGTCTGGGACCATAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp AGACATCATAATAGAGAGTGGGTTCTGGGAAAGGGTTaGCTCTGGAGGCATGGTATAAGGTGTACTAGAGGG +
Preference number: 6 (lower is better)
Translates to: RHHNREWVLGKG*LWRHGIRCTRG
Trigger: CCCTCTAGTACACCTTATACCATGCCTCCAGAGCCAACCCTTTCCCAGAACCCACTCTCTATTATGATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp ACATCCCATCTTAGCAGCTTAAAACATCATGTTTCCTaGGTTGCCAGGTCCTTGGCTAAATCCACCCATGCC +
Preference number: 6 (lower is better)
Translates to: TSHLSSLKHHVS*VARSLAKSTHA
Trigger: GGCATGGGTGGATTTAGCCAAGGACCTGGCAACCCAGGAAACATGATGTTTTAAGCTGCTAAGATGGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp AGACTGGGAGTTCATAGAAGGTGGAACCATTTCATCTaGAGAAAAGGGTACATCTCTATGTCCTTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: RLGVHRRWNHFI*RKGYISMSLRA
Trigger: GGCCCTCAAGGACATAGAGATGTACCCTTTTCTCCAGATGAAATGGTTCCACCTTCTATGAACTCCCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS CCA 72 bp TGTGGTCAGCAGAATTACATTCCTGATTGGAGAATTTaGAATCCAGCTGGGGGTTTCCAGATGGGGACATCA +
Preference number: 6 (lower is better)
Translates to: CGQQNYIPDWRI*NPAGGFQMGTS
Trigger: TGATGTCCCCATCTGGAAACCCCCAGCTGGATTCCAAATTCTCCAATCAGGAATGTAATTCTGCTGACCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684121.1
CDS GCA 72 bp CATCGGGACACGGAAGAACTTTCCAAAAATGATCTCTaGCACCCAATCAGATGGGAATGTTTAGGTCAAAGC +
Preference number: 6 (lower is better)
Translates to: HRDTEELSKNDL*HPIRWECLGQS
Trigger: GCTTTGACCTAAACATTCCCATCTGATTGGGTGGCAGAGATCATTTTTGGAAAGTTCTTCCGTGTCCCGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000497938.1
ENST00000683836.1
CDS CAA 72 bp TCATGGTATAACGGGGTGGAACTGGGCATTGCAAACTaGGACATTCGAGACATCATAATAGAGAGTGGGTTC +
Preference number: 6 (lower is better)
Translates to: SWYNGVELGIAN*DIRDIIIESGF
Trigger: GAACCCACTCTCTATTATGATGTCTCGAATGTCCAAGTTTGCAATGCCCAGTTCCACCCCGTTATACCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000683836.1
ENST00000684121.1
CDS TCA 72 bp TCTTCTACATCGGGACACGGAAGAACTTTCCAAAAATaGTCTCTGCCACCCAATCAGATGGGAATGTTTAGG +
Preference number: 6 (lower is better)
Translates to: SSTSGHGRTFQK*SLPPNQMGMFR
Trigger: CCTAAACATTCCCATCTGATTGGGTGGCAGAGATCATTTTTGGAAAGTTCTTCCGTGTCCCGATGTAGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000497938.1
ENST00000683836.1
CDS CCA 72 bp GAACTTTCCAAAAATGATCTCTGCCACCCAATCAGATaGGAATGTTTAGGTCAAAGCAGAATGACGCCAACT +
Preference number: 6 (lower is better)
Translates to: ELSKNDLCHPIR*ECLGQSRMTPT
Trigger: AGTTGGCGTCATTCTGCTTTGACCTAAACATTCCCATCTGATTGGGTGGCAGAGATCATTTTTGGAAAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000234739.8
ENST00000497938.1
ENST00000683836.1