RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCL7C (Homo sapiens)

Ensembl gene IDs: ENSG00000099385

Ensembl transcript IDs: ENST00000215115.5, ENST00000380317.8, ENST00000572628.5, ENST00000574418.5, ENST00000576194.1

Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGCGGGTCCCCTGCGCTTGTCCCCGCCACGGCCCTTGCCCGCTGTaGACCCGGAGGCTCAGTGCCGGCAGGACTCGGGACTCGGCGCCT +
Preference number: 1 (lower is better)
Translates to: RRVPCACPRHGPCPL*TRRLSAGRTRDSAP
Trigger: AGGCGCCGAGTCCCGAGTCCTGCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGGGACCCGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR GCA 90 bp TTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTaGCGGCAGGACTCGGGACTCGGCGCCTCTCCCGGGGTGGCAGGC +
Preference number: 1 (lower is better)
Translates to: LSPPRPLPAVDPEAQ*RQDSGLGASPGVAG
Trigger: GCCTGCCACCCCGGGAGAGGCGCCGAGTCCCGAGTCCTGCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 90 bp GGACTCGGGACTCGGCGCCTCTCCCGGGGTGGCAGGCGCCTCGCATaGCACACTCAGACCGCTGGGAGGGTGGCCGCATGGGTGCGTGAG +
Preference number: 1 (lower is better)
Translates to: GLGTRRLSRGGRRLA*HTQTAGRVAAWVRE
Trigger: CTCACGCACCCATGCGGCCACCCTCCCAGCGGTCTGAGTGTGCCATGCGAGGCGCCTGCCACCCCGGGAGAGGCGCCGAGTCCCGAGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 90 bp GGGGTGGCAGGCGCCTCGCATGGCACACTCAGACCGCTGGGAGGGTaGCCGCATGGGTGCGTGAGGAGGTGGGCGAGGCAGCCCAGTGCA +
Preference number: 1 (lower is better)
Translates to: GVAGASHGTLRPLGG*PHGCVRRWARQPSA
Trigger: TGCACTGGGCTGCCTCGCCCACCTCCTCACGCACCCATGCGGCCACCCTCCCAGCGGTCTGAGTGTGCCATGCGAGGCGCCTGCCACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR CCA 90 bp GTCCTCGGGCGCTGGAGGTCTCCCAGCGCTGGCATACATAAGCCCTaGCGTGCGGGGCGGCTTCTGCGCTGGGGTCTCTGCGCGTGCACG +
Preference number: 1 (lower is better)
Translates to: VLGRWRSPSAGIHKP*RAGRLLRWGLCACT
Trigger: CGTGCACGCGCAGAGACCCCAGCGCAGAAGCCGCCCCGCACGCCAGGGCTTATGTATGCCAGCGCTGGGAGACCTCCAGCGCCCGAGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR GCA 90 bp AAGCCCTGGCGTGCGGGGCGGCTTCTGCGCTGGGGTCTCTGCGCGTaGACGGGCCTCAACATATGCATGGACGTCCAGGTGCCACGTGGG +
Preference number: 1 (lower is better)
Translates to: KPWRAGRLLRWGLCA*TGLNICMDVQVPRG
Trigger: CCCACGTGGCACCTGGACGTCCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAGAAGCCGCCCCGCACGCCAGGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 90 bp CGCGTGCACGGGCCTCAACATATGCATGGACGTCCAGGTGCCACGTaGGCATCTCGTGGTGCTGCAGAAGGCGGGAGGCCGGCGGGTCCC +
Preference number: 1 (lower is better)
Translates to: RVHGPQHMHGRPGAT*ASRGAAEGGRPAGP
Trigger: GGGACCCGCCGGCCTCCCGCCTTCTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATGCATATGTTGAGGCCCGTGCACGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 90 bp AGGGCTGCGCCAGAAGTCTCCACGCCTCCACCCGAGGCGGGCGCCTaGGCTGAAAGGCCGCTTGTCCACATGGGTTCCCAGGTTGGCCTG +
Preference number: 1 (lower is better)
Translates to: RAAPEVSTPPPEAGA*AERPLVHMGSQVGL
Trigger: CAGGCCAACCTGGGAACCCATGTGGACAAGCGGCCTTTCAGCCCAGGCGCCCGCCTCGGGTGGAGGCGTGGAGACTTCTGGCGCAGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR GCA 90 bp TCAACATATGCATGGACGTCCAGGTGCCACGTGGGCATCTCGTGGTaGTGCAGAAGGCGGGAGGCCGGCGGGTCCCCTGCGCTTGTCCCC +
Preference number: 1 (lower is better)
Translates to: STYAWTSRCHVGISW*CRRREAGGSPALVP
Trigger: GGGGACAAGCGCAGGGGACCCGCCGGCCTCCCGCCTTCTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATGCATATGTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR GCA 90 bp CTCCCAGCGCTGGCATACATAAGCCCTGGCGTGCGGGGCGGCTTCTaGGCTGGGGTCTCTGCGCGTGCACGGGCCTCAACATATGCATGG +
Preference number: 1 (lower is better)
Translates to: LPALAYISPGVRGGF*AGVSARARASTYAW
Trigger: CCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAGAAGCCGCCCCGCACGCCAGGGCTTATGTATGCCAGCGCTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 90 bp AGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTGAGCTaGGAAGCTCTTTCCGCCCTCGGGGCACAGGTAGTGGCTGGATCT +
Preference number: 1 (lower is better)
Translates to: RCGAARPPMLPRWVS*EALSALGAQVVAGS
Trigger: AGATCCAGCCACTACCTGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR CCA 90 bp GCCTCAACATATGCATGGACGTCCAGGTGCCACGTGGGCATCTCGTaGTGCTGCAGAAGGCGGGAGGCCGGCGGGTCCCCTGCGCTTGTC +
Preference number: 1 (lower is better)
Translates to: ASTYAWTSRCHVGIS*CCRRREAGGSPALV
Trigger: GACAAGCGCAGGGGACCCGCCGGCCTCCCGCCTTCTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATGCATATGTTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR GCA 90 bp CGGCTTCTGCGCTGGGGTCTCTGCGCGTGCACGGGCCTCAACATATaGATGGACGTCCAGGTGCCACGTGGGCATCTCGTGGTGCTGCAG +
Preference number: 1 (lower is better)
Translates to: RLLRWGLCACTGLNI*MDVQVPRGHLVVLQ
Trigger: CTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAGAAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 90 bp AGCGCTGGCATACATAAGCCCTGGCGTGCGGGGCGGCTTCTGCGCTaGGGTCTCTGCGCGTGCACGGGCCTCAACATATGCATGGACGTC +
Preference number: 1 (lower is better)
Translates to: SAGIHKPWRAGRLLR*GLCACTGLNICMDV
Trigger: GACGTCCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAGAAGCCGCCCCGCACGCCAGGGCTTATGTATGCCAGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 90 bp AGGCTGACACCCTGGTGGAACCACTTGCCGTATGTCCTCGGGCGCTaGAGGTCTCCCAGCGCTGGCATACATAAGCCCTGGCGTGCGGGG +
Preference number: 1 (lower is better)
Translates to: RLTPWWNHLPYVLGR*RSPSAGIHKPWRAG
Trigger: CCCCGCACGCCAGGGCTTATGTATGCCAGCGCTGGGAGACCTCCAGCGCCCGAGGACATACGGCAAGTGGTTCCACCAGGGTGTCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR GCA 90 bp ATACATAAGCCCTGGCGTGCGGGGCGGCTTCTGCGCTGGGGTCTCTaGGCGTGCACGGGCCTCAACATATGCATGGACGTCCAGGTGCCA +
Preference number: 1 (lower is better)
Translates to: IHKPWRAGRLLRWGL*ACTGLNICMDVQVP
Trigger: TGGCACCTGGACGTCCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAGAAGCCGCCCCGCACGCCAGGGCTTATGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 90 bp TTCTGCGCTGGGGTCTCTGCGCGTGCACGGGCCTCAACATATGCATaGACGTCCAGGTGCCACGTGGGCATCTCGTGGTGCTGCAGAAGG +
Preference number: 1 (lower is better)
Translates to: FCAGVSARARASTYA*TSRCHVGISWCCRR
Trigger: CCTTCTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 90 bp TGTCCACATGGGTTCCCAGGTTGGCCTGCTAGGCTGACACCCTGGTaGAACCACTTGCCGTATGTCCTCGGGCGCTGGAGGTCTCCCAGC +
Preference number: 1 (lower is better)
Translates to: CPHGFPGWPARLTPW*NHLPYVLGRWRSPS
Trigger: GCTGGGAGACCTCCAGCGCCCGAGGACATACGGCAAGTGGTTCCACCAGGGTGTCAGCCTAGCAGGCCAACCTGGGAACCCATGTGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 90 bp GCTTGTCCACATGGGTTCCCAGGTTGGCCTGCTAGGCTGACACCCTaGTGGAACCACTTGCCGTATGTCCTCGGGCGCTGGAGGTCTCCC +
Preference number: 1 (lower is better)
Translates to: ACPHGFPGWPARLTP*WNHLPYVLGRWRSP
Trigger: GGGAGACCTCCAGCGCCCGAGGACATACGGCAAGTGGTTCCACCAGGGTGTCAGCCTAGCAGGCCAACCTGGGAACCCATGTGGACAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR TCA 90 bp GAAAGGCCGCTTGTCCACATGGGTTCCCAGGTTGGCCTGCTAGGCTaGCACCCTGGTGGAACCACTTGCCGTATGTCCTCGGGCGCTGGA +
Preference number: 1 (lower is better)
Translates to: ERPLVHMGSQVGLLG*HPGGTTCRMSSGAG
Trigger: TCCAGCGCCCGAGGACATACGGCAAGTGGTTCCACCAGGGTGTCAGCCTAGCAGGCCAACCTGGGAACCCATGTGGACAAGCGGCCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 90 bp GAAGCGCTGGTTATGCGATGTGTGGTTGTTGTCATGGAGAATAACTaGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCTTGCAGTTTT +
Preference number: 1 (lower is better)
Translates to: EALVMRCVVVVMENN*ALSVEQCHSRPCSF
Trigger: AAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR GCA 90 bp GTGGTTGTTGTCATGGAGAATAACTGGGCCCTTTCTGTTGAGCAGTaGCACAGCAGGCCTTGCAGTTTTTGGTGCATCTCATCGATTTGC +
Preference number: 1 (lower is better)
Translates to: VVVVMENNWALSVEQ*HSRPCSFWCISSIC
Trigger: GCAAATCGATGAGATGCACCAAAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTCCATGACAACAACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR CCA 90 bp TACTTCTCAGATGTAATGGTTTCACTGGGATTCAGAAAGTTGCAGTaGATCAGACCAGCAGCAGACCACCAAACAGTGACCGTGACCTTT +
Preference number: 1 (lower is better)
Translates to: YFSDVMVSLGFRKLQ*IRPAADHQTVTVTF
Trigger: AAAGGTCACGGTCACTGTTTGGTGGTCTGCTGCTGGTCTGATCCACTGCAACTTTCTGAATCCCAGTGAAACCATTACATCTGAGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR TCA 90 bp TGCCACAGCAGGCCTTGCAGTTTTTGGTGCATCTCATCGATTTGCTaGGCATACTTCTCAGATGTAATGGTTTCACTGGGATTCAGAAAG +
Preference number: 1 (lower is better)
Translates to: CHSRPCSFWCISSIC*AYFSDVMVSLGFRK
Trigger: CTTTCTGAATCCCAGTGAAACCATTACATCTGAGAAGTATGCTCAGCAAATCGATGAGATGCACCAAAAACTGCAAGGCCTGCTGTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR GCA 90 bp CCATGCCACAGGGATGCAGTGAGAACTAAATTACATCAGTCACAATaGCTGGTACAGAGTAAACCCTTGATAAATGGGAGGCGTTATTAT +
Preference number: 1 (lower is better)
Translates to: PCHRDAVRTKLHQSQ*LVQSKPLINGRRYY
Trigger: ATAATAACGCCTCCCATTTATCAAGGGTTTACTCTGTACCAGGCATTGTGACTGATGTAATTTAGTTCTCACTGCATCCCTGTGGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR GCA 90 bp AAGTACTTTAGAGCTGCTTCTCAGTACAGCCACAGAGCTGGTTGTTaGCGGTTGTCATATAAAATCGACTTTTTGTCACACATCACAATC +
Preference number: 1 (lower is better)
Translates to: KYFRAASQYSHRAGC*RLSYKIDFLSHITI
Trigger: GATTGTGATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGCTCTGTGGCTGTACTGAGAAGCAGCTCTAAAGTACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR TCA 90 bp CTGCAAAATGCAGATAATGAGAATATCCATGCCACAGGGATGCAGTaGGAACTAAATTACATCAGTCACAATGCCTGGTACAGAGTAAAC +
Preference number: 1 (lower is better)
Translates to: LQNADNENIHATGMQ*ELNYISHNAWYRVN
Trigger: GTTTACTCTGTACCAGGCATTGTGACTGATGTAATTTAGTTCTCACTGCATCCCTGTGGCATGGATATTCTCATTATCTGCATTTTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR TCA 90 bp AAAGGTCATTCCAGAATTCCATGGGCTGAACCTAAAGCATTGGCTTaGAGCGTGAAATTTCTGTCATCTCAATCATTGGTACGAATGTTG +
Preference number: 1 (lower is better)
Translates to: KGHSRIPWAEPKALA*SVKFLSSQSLVRML
Trigger: CAACATTCGTACCAATGATTGAGATGACAGAAATTTCACGCTTCAAGCCAATGCTTTAGGTTCAGCCCATGGAATTCTGGAATGACCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CAA 90 bp GGCGGGAGGCCGGCGGGTCCCCTGCGCTTGTCCCCGCCACGGCCCTaGCCCGCTGTGGACCCGGAGGCTCAGTGCCGGCAGGACTCGGGA +
Preference number: 2 (lower is better)
Translates to: GGRPAGPLRLSPPRP*PAVDPEAQCRQDSG
Trigger: TCCCGAGTCCTGCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGGGACCCGCCGGCCTCCCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CAA 90 bp TCTCGTGGTGCTGCAGAAGGCGGGAGGCCGGCGGGTCCCCTGCGCTaGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: SRGAAEGGRPAGPLR*SPPRPLPAVDPEAQ
Trigger: CTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGGGACCCGCCGGCCTCCCGCCTTCTGCAGCACCACGAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CCA 90 bp CCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGCCGGCAGGACTGGCAGGCGCCTCGCATaGCACACTCAGACCGCTGGG +
Preference number: 2 (lower is better)
Translates to: PRHGPCPLWTRRLSAGRTGRRLA*HTQTAG
Trigger: CCCAGCGGTCTGAGTGTGCCATGCGAGGCGCCTGCC...AGTCCTGCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR GCA 90 bp CTCAGTGCCGGCAGGACTCGGGACTCGGCGCCTCTCCCGGGGTGGCAGGCGCCTGGCGAGCCAGATGGGTaGTGTGGCCTTAGGTTCGGG +
Preference number: 2 (lower is better)
Translates to: LSAGRTRDSAPLPGWQAPGEPDG*CGLRFG
Trigger: CCCGAACCTAAGGCCACAGCACCCATCTGGCTCGCC...AGGCGCCTGCCACCCCGGGAGAGGCGCCGAGTCCCGAGTCCTGCCGGCACTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR GCA 90 bp CACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCCGAGGCGAGGCAGCCCAGTaGACCCCTCCCCTAGGCCTC +
Preference number: 2 (lower is better)
Translates to: HPSPRPLARRPQALDVVRGEAAQ*TPPLGL
Trigger: GAGGCCTAGGGGAGGGGTGCACTGGGCTGCCTCGCC...TCGGACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR CCA 90 bp CACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCCGAGGGAGGGTGGCCGCATaGGTGCGTGAGGAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: HPSPRPLARRPQALDVVRGRVAA*VREEVG
Trigger: GCCCACCTCCTCACGCACCCATGCGGCCACCCTCCC...TCGGACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR CCA 90 bp AGCCCAGTGCACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATAGACCGCTGGGAGGGTaGCCGCATGGGTGCGTGAGG +
Preference number: 2 (lower is better)
Translates to: SPVHPSPRPLARRPQALDRPLGG*PHGCVR
Trigger: CCTCACGCACCCATGCGGCCACCCTCCCAGCGGTCT...ATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTGCACTGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR GCA 90 bp GTGCGGGGCGGCTTCTGCGCTGGGGTCTCTGCGCGTGCACGGGCCTCAACATATCCTAAGCCCTTCCCATaGATTCGGGCGCCAGTGGCG +
Preference number: 2 (lower is better)
Translates to: VRGGFCAGVSARARASTYPKPFP*IRAPVA
Trigger: CGCCACTGGCGCCCGAATGCATGGGAAGGGCTTAGG...ATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAGAAGCCGCCCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR GCA 90 bp GCTCTTTCCGCCCTCGGGGCACAGGTAGTGGCTGGATCTTGGGGCAGCCAAGGGGGCGAGCCAGATGGGTaGTGTGGCCTTAGGTTCGGG +
Preference number: 2 (lower is better)
Translates to: ALSALGAQVVAGSWGSQGGEPDG*CGLRFG
Trigger: CCCGAACCTAAGGCCACAGCACCCATCTGGCTCGCC...CCCTTGGCTGCCCCAAGATCCAGCCACTACCTGTGCCCCGAGGGCGGAAAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR GCA 90 bp GTGCACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCCCTAAGCCCTTCCCATaGATTCGGGCGCCAGTGGCG +
Preference number: 2 (lower is better)
Translates to: VHPSPRPLARRPQALDVVPKPFP*IRAPVA
Trigger: CGCCACTGGCGCCCGAATGCATGGGAAGGGCTTAGG...GACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR GCA 90 bp CTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGTGCCCTCGGGGCCTTaGTGCCTCCCCCGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: LRHWMWSEFCPKPFPCIRVPSGP*CLPREL
Trigger: GAGCTCCCGGGGGAGGCAGCAAGGCCCCGAGGGCAC...CCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR-3UTR CCA 90 bp AGGTTAGGCCACCAGCTCAGGGCTGCGCCAGAAGTCTCCACGCCTCCACCCGAGGGCGGCCTCAGGCACTaGATGTGGTCCGAGTTCTGC +
Preference number: 2 (lower is better)
Translates to: RLGHQLRAAPEVSTPPPEGGLRH*MWSEFC
Trigger: GCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCC...CTCGGGTGGAGGCGTGGAGACTTCTGGCGCAGCCCTGAGCTGGTGGCCTAACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CCA 90 bp GCACGGGCCTCAACATATGCATGGACGTCCAGGTGCCACGTGGGCATCTCGTGGGGGTGCGTGAGGAGGTaGGCGAGGCAGCCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: ARASTYAWTSRCHVGISWGCVRR*ARQPSA
Trigger: TGCACTGGGCTGCCTCGCCCACCTCCTCACGCACCC...CCACGAGATGCCCACGTGGCACCTGGACGTCCATGCATATGTTGAGGCCCGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CCA 90 bp AAGGCGGCCTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATCTCCCCCGGGAGCTCTaGTGTCCGGCACCGCCATGG +
Preference number: 2 (lower is better)
Translates to: KAASGTGCGPSSALSPSHLPREL*CPAPPW
Trigger: CCATGGCGGTGCCGGACACCAGAGCTCCCGGGGGAG...ATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR CAA 90 bp GGGTTCCCAGGTTGGCCTGCTAGGCTGACACCCTGGTGGAACCACTaGCCGTATGTCCTCGGGCGCTGGAGGTCTCCCAGCGCTGGCATA +
Preference number: 2 (lower is better)
Translates to: GFPGWPARLTPWWNH*PYVLGRWRSPSAGI
Trigger: TATGCCAGCGCTGGGAGACCTCCAGCGCCCGAGGACATACGGCAAGTGGTTCCACCAGGGTGTCAGCCTAGCAGGCCAACCTGGGAACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CCA 90 bp TTAGGCCACCAGCTCAGGGCTGCGCCAGAAGTCTCCACGCCTCCACCCGAGGCGCCGATGTTACCGCGGTaGGTGAGCTGGGAAGCTCTT +
Preference number: 2 (lower is better)
Translates to: LGHQLRAAPEVSTPPPEAPMLPR*VSWEAL
Trigger: AAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGG...CGCCTCGGGTGGAGGCGTGGAGACTTCTGGCGCAGCCCTGAGCTGGTGGCCTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CCA 90 bp GAACTGGGCCGGACATTTGTCCGGAGGCCCCTCCTGGGCAGGAGCCTCCTGAGGCCGATGTTACCGCGGTaGGTGAGCTGGGAAGCTCTT +
Preference number: 2 (lower is better)
Translates to: ELGRTFVRRPLLGRSLLRPMLPR*VSWEAL
Trigger: AAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGG...CCTCAGGAGGCTCCTGCCCAGGAGGGGCCTCCGGACAAATGTCCGGCCCAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR-3UTR CCA 90 bp GCTCTTTCCGCCCTCGGGGCACAGGTAGTGGCTGGATCTTGGGGCAGCCAAGGGCTCCTTGGTCAGCATTaGGGGTTCGTCGGTGCTGCC +
Preference number: 2 (lower is better)
Translates to: ALSALGAQVVAGSWGSQGLLGQH*GFVGAA
Trigger: GGCAGCACCGACGAACCCCCAATGCTGACCAAGGAG...CCCTTGGCTGCCCCAAGATCCAGCCACTACCTGTGCCCCGAGGGCGGAAAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR-3UTR CCA 90 bp GTGCACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCGCACCGCCATGGAACTaGGCCGGACATTTGTCCGGA +
Preference number: 2 (lower is better)
Translates to: VHPSPRPLARRPQALDVVAPPWN*AGHLSG
Trigger: TCCGGACAAATGTCCGGCCCAGTTCCATGGCGGTGC...GACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR-3UTR TCA 90 bp TCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACATGTTACCGCGGTGGGTaGGCTGGGAAGCTCTTTCCG +
Preference number: 2 (lower is better)
Translates to: SDVTAVGELGSSFRPRGTCYRGG*AGKLFP
Trigger: CGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACA...TGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR TCA 90 bp TCTGCCCTAAGCCCTTCCCATGCATTCGGGCGCCAGTGGCGAGCCAGATGGGTGTGTTACCGCGGTGGGTaGGCTGGGAAGCTCTTTCCG +
Preference number: 2 (lower is better)
Translates to: SALSPSHAFGRQWRARWVCYRGG*AGKLFP
Trigger: CGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACA...CACCCATCTGGCTCGCCACTGGCGCCCGAATGCATGGGAAGGGCTTAGGGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR CCA 90 bp GCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCGGCGGCCTCAGGCACTaGATGTGGTCCGAGTTCTGC +
Preference number: 2 (lower is better)
Translates to: ASSKAASGTGCGPSSALSGGLRH*MWSEFC
Trigger: GCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCC...GCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR CCA 90 bp CTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGGGTGCGTGAGGAGGTaGGCGAGGCAGCCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: LRHWMWSEFCPKPFPCIRGCVRR*ARQPSA
Trigger: TGCACTGGGCTGCCTCGCCCACCTCCTCACGCACCC...CCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR CCA 90 bp AGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGCGGCACACTCAGACCGCTaGGAGGGTGGCCGCATGGGT +
Preference number: 2 (lower is better)
Translates to: RHWMWSEFCPKPFPCIRAAHSDR*EGGRMG
Trigger: ACCCATGCGGCCACCCTCCCAGCGGTCTGAGTGTGC...CGCCCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR CCA 90 bp AGGCTGACACCCTGGTGGAACCACTTGCCGTATGTCCTCGGGCGCTGGAGGTCTGGCATACATAAGCCCTaGCGTGCGGGGCGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: RLTPWWNHLPYVLGRWRSGIHKP*RAGRLL
Trigger: CAGAAGCCGCCCCGCACGCCAGGGCTTATGTATGCC...AGACCTCCAGCGCCCGAGGACATACGGCAAGTGGTTCCACCAGGGTGTCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CCA 90 bp TCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACACACCTCCCCTTACCCTaGGGGATTGTTCTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: SDVTAVGELGSSFRPRGTHLPLP*GIVLGA
Trigger: GGCACCCAGAACAATCCCCCAGGGTAAGGGGAGGTG...TGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR-3UTR CCA 90 bp TATGCATGGACGTCCAGGTGCCACGTGGGCATCTCGTGGTGCTGCAGAAGGCGGGGCACAGGTAGTGGCTaGATCTTGGGGCAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: YAWTSRCHVGISWCCRRRGTGSG*ILGQPR
Trigger: CCTTGGCTGCCCCAAGATCCAGCCACTACCTGTGCC...CCGCCTTCTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATGCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CCA 90 bp CACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCCGACTCAGGCACTGGATGTaGTCCGAGTTCTGCCCTAAG +
Preference number: 2 (lower is better)
Translates to: HPSPRPLARRPQALDVVRLRHWM*SEFCPK
Trigger: CTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAG...TCGGACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR TCA 90 bp TCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACATTCAGCCCCTTCTCGTaGAGGGCTCTCCTCGTCATT +
Preference number: 2 (lower is better)
Translates to: SDVTAVGELGSSFRPRGTFSPFS*RALLVI
Trigger: AATGACGAGGAGAGCCCTTCACGAGAAGGGGCTGAA...TGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR-3UTR GCA 90 bp GAGCTTGGTGAAGGGCCTTGGAACCACCCAAAAGGCTCACTCGCGCTGCTTCTCGCATGGACGTCCAGGTaGCACGTGGGCATCTCGTGG +
Preference number: 2 (lower is better)
Translates to: ELGEGPWNHPKGSLALLLAWTSR*HVGISW
Trigger: CCACGAGATGCCCACGTGGCACCTGGACGTCCATGC...GAGAAGCAGCGCGAGTGAGCCTTTTGGGTGGTTCCAAGGCCCTTCACCAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR GCA 90 bp CCCGCTGTGTCCCAGCACAAGAAGTGGTACTGCATTGCTGACTTTGGGCAGGTTGTGGGCATCTCGTGGTaGTGCAGAAGGCGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: PAVSQHKKWYCIADFGQVVGISW*CRRREA
Trigger: GGCCTCCCGCCTTCTGCAGCACCACGAGATGCCCAC...AACCTGCCCAAAGTCAGCAATGCAGTACCACTTCTTGTGCTGGGACACAGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CCA 90 bp CTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGTAGTGGCTGGATCTTaGGGCAGCCAAGGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: LRHWMWSEFCPKPFPCIRVVAGS*GSQGRL
Trigger: AAGCCTCCCTTGGCTGCCCCAAGATCCAGCCACTAC...CCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR CCA 90 bp GAGGGGCTCTGTCTTCAGCCCCTTCTCGTGAAGGGCTCTCCTCGTCATTCTCACGTAGTGGCTGGATCTTaGGGCAGCCAAGGGAGGCTT +
Preference number: 2 (lower is better)
Translates to: EGLCLQPLLVKGSPRHSHVVAGS*GSQGRL
Trigger: AAGCCTCCCTTGGCTGCCCCAAGATCCAGCCACTAC...GTGAGAATGACGAGGAGAGCCCTTCACGAGAAGGGGCTGAAGACAGAGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR CAA 90 bp TTTCCTAGTACAACAGACCCAACGGTGAAGTCAGGAAGTGAGAGCTaGGTGAAGGGCCTTGGAACCACCCAAAAGGCTCACTCGCGCTGC +
Preference number: 2 (lower is better)
Translates to: FPSTTDPTVKSGSES*VKGLGTTQKAHSRC
Trigger: GCAGCGCGAGTGAGCCTTTTGGGTGGTTCCAAGGCCCTTCACCAAGCTCTCACTTCCTGACTTCACCGTTGGGTCTGTTGTACTAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR GCA 90 bp GGCCTTAACCCCGCTGTGTCCCAGCACAAGAAGTGGTACTGCATTGCTGACTTTATGTGGTCCGAGTTCTaGCCTAAGCCCTTCCCATGC +
Preference number: 2 (lower is better)
Translates to: GLNPAVSQHKKWYCIADFMWSEF*PKPFPC
Trigger: GCATGGGAAGGGCTTAGGGCAGAACTCGGACCACAT...AAAGTCAGCAATGCAGTACCACTTCTTGTGCTGGGACACAGCGGGGTTAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CCA 90 bp TTAACCCCGCTGTGTCCCAGCACAAGAAGTGGTACTGCATTGCTGACTTTGGGCCTTGGTGAAGGGCCTTaGAACCACCCAAAAGGCTCA +
Preference number: 2 (lower is better)
Translates to: LTPLCPSTRSGTALLTLGLGEGP*NHPKGS
Trigger: TGAGCCTTTTGGGTGGTTCCAAGGCCCTTCACCAAG...GCCCAAAGTCAGCAATGCAGTACCACTTCTTGTGCTGGGACACAGCGGGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CAA 90 bp CGCACCCGGCCTCAATATTTGAAGCGCTGGTTATGCGATGTGTGGTaGTTGTCATGGAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCC +
Preference number: 2 (lower is better)
Translates to: RTRPQYLKRWLCDVW*LSWRITGPFLLSSA
Trigger: GGCACTGCTCAACAGAAAGGGCCCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAAATATTGAGGCCGGGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR CAA 90 bp ACCCGGCCTCAATATTTGAAGCGCTGGTTATGCGATGTGTGGTTGTaGTCATGGAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCCACA +
Preference number: 2 (lower is better)
Translates to: TRPQYLKRWLCDVWL*SWRITGPFLLSSAT
Trigger: TGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAAATATTGAGGCCGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR-3UTR GCA 90 bp CAATCATTGGTACGAATGTTGACTTTCATCCCAGGGAGTATCTACTCACTTCAGTGGGGTCTCTGCGCGTaGACGGGCCTCAACATATGC +
Preference number: 2 (lower is better)
Translates to: QSLVRMLTFIPGSIYSLQWGLCA*TGLNIC
Trigger: GCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCA...CTGAAGTGAGTAGATACTCCCTGGGATGAAAGTCAACATTCGTACCAATGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CAA 90 bp GCAGTGCCACAGCAGGCCTTGCAGTTTTTGGTGCATCTCATCGATTaGCTGAGCATACTTCTCAGATGTAATGGTTTCACTGGGATTCAG +
Preference number: 2 (lower is better)
Translates to: AVPQQALQFLVHLID*LSILLRCNGFTGIQ
Trigger: CTGAATCCCAGTGAAACCATTACATCTGAGAAGTATGCTCAGCAAATCGATGAGATGCACCAAAAACTGCAAGGCCTGCTGTGGCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR CAA 90 bp AGAACTAAATTACATCAGTCACAATGCCTGGTACAGAGTAAACCCTaGATAAATGGGAGGCGTTATTATTTCCTAGTACAACAGACCCAA +
Preference number: 2 (lower is better)
Translates to: RTKLHQSQCLVQSKP*INGRRYYFLVQQTQ
Trigger: TTGGGTCTGTTGTACTAGGAAATAATAACGCCTCCCATTTATCAAGGGTTTACTCTGTACCAGGCATTGTGACTGATGTAATTTAGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR GCA 72 bp CCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTaGCGGCAGGACTCGGGACTCGGCGCCTCTCCCGGG +
Preference number: 3 (lower is better)
Translates to: PRPLPAVDPEAQ*RQDSGLGASPG
Trigger: CCCGGGAGAGGCGCCGAGTCCCGAGTCCTGCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 72 bp CCCTGCGCTTGTCCCCGCCACGGCCCTTGCCCGCTGTaGACCCGGAGGCTCAGTGCCGGCAGGACTCGGGAC +
Preference number: 3 (lower is better)
Translates to: PCACPRHGPCPL*TRRLSAGRTRD
Trigger: GTCCCGAGTCCTGCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 72 bp ACTCGGCGCCTCTCCCGGGGTGGCAGGCGCCTCGCATaGCACACTCAGACCGCTGGGAGGGTGGCCGCATGG +
Preference number: 3 (lower is better)
Translates to: TRRLSRGGRRLA*HTQTAGRVAAW
Trigger: CCATGCGGCCACCCTCCCAGCGGTCTGAGTGTGCCATGCGAGGCGCCTGCCACCCCGGGAGAGGCGCCGAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR GCA 72 bp GCATGGACGTCCAGGTGCCACGTGGGCATCTCGTGGTaGTGCAGAAGGCGGGAGGCCGGCGGGTCCCCTGCG +
Preference number: 3 (lower is better)
Translates to: AWTSRCHVGISW*CRRREAGGSPA
Trigger: CGCAGGGGACCCGCCGGCCTCCCGCCTTCTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 72 bp GGCGCCTCGCATGGCACACTCAGACCGCTGGGAGGGTaGCCGCATGGGTGCGTGAGGAGGTGGGCGAGGCAG +
Preference number: 3 (lower is better)
Translates to: GASHGTLRPLGG*PHGCVRRWARQ
Trigger: CTGCCTCGCCCACCTCCTCACGCACCCATGCGGCCACCCTCCCAGCGGTCTGAGTGTGCCATGCGAGGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR TCA 72 bp GTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTaGGCTGGGAAGCTCTTTCCGCCCTCGGGGCACAGG +
Preference number: 3 (lower is better)
Translates to: VGPLALRCYRGG*AGKLFPPSGHR
Trigger: CCTGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR CCA 72 bp TGCCTCCCCCGGGAGCTCTGGTGTCCGGCACCGCCATaGAACTGGGCCGGACATTTGTCCGGAGGCCCCTCC +
Preference number: 3 (lower is better)
Translates to: CLPRELWCPAPP*NWAGHLSGGPS
Trigger: GGAGGGGCCTCCGGACAAATGTCCGGCCCAGTTCCATGGCGGTGCCGGACACCAGAGCTCCCGGGGGAGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR GCA 72 bp CCCTGGCGTGCGGGGCGGCTTCTGCGCTGGGGTCTCTaGGCGTGCACGGGCCTCAACATATGCATGGACGTC +
Preference number: 3 (lower is better)
Translates to: PWRAGRLLRWGL*ACTGLNICMDV
Trigger: GACGTCCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAGAAGCCGCCCCGCACGCCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 72 bp AGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTaGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCA +
Preference number: 3 (lower is better)
Translates to: RCGAARPPMLPR*VSWEALSALGA
Trigger: TGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR CCA 72 bp CGCTGGAGGTCTCCCAGCGCTGGCATACATAAGCCCTaGCGTGCGGGGCGGCTTCTGCGCTGGGGTCTCTGC +
Preference number: 3 (lower is better)
Translates to: RWRSPSAGIHKP*RAGRLLRWGLC
Trigger: GCAGAGACCCCAGCGCAGAAGCCGCCCCGCACGCCAGGGCTTATGTATGCCAGCGCTGGGAGACCTCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CAA 90 bp CCGCCATGGAACTGGGCCGGACATTTGTCCGGAGGCCCCTCCTGGGCAGGAGCCGGTAGTGGCTGGATCTaGGGGCAGCCAAGGGAGGCT +
Preference number: 3 (lower is better)
Translates to: PPWNWAGHLSGGPSWAGAGSGWI*GQPREA
Trigger: AGCCTCCCTTGGCTGCCCCAAGATCCAGCCACTACC...GGCTCCTGCCCAGGAGGGGCCTCCGGACAAATGTCCGGCCCAGTTCCATGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR GCA 72 bp CGTGCGGGGCGGCTTCTGCGCTGGGGTCTCTGCGCGTaGACGGGCCTCAACATATGCATGGACGTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: RAGRLLRWGLCA*TGLNICMDVQV
Trigger: CACCTGGACGTCCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAGAAGCCGCCCCGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 72 bp CCAGAAGTCTCCACGCCTCCACCCGAGGCGGGCGCCTaGGCTGAAAGGCCGCTTGTCCACATGGGTTCCCAG +
Preference number: 3 (lower is better)
Translates to: PEVSTPPPEAGA*AERPLVHMGSQ
Trigger: CTGGGAACCCATGTGGACAAGCGGCCTTTCAGCCCAGGCGCCCGCCTCGGGTGGAGGCGTGGAGACTTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CAA 90 bp GAGCTTGGTGAAGGGCCTTGGAACCACCCAAAAGGCTCACTCGCGCTGCTTCTCGCGGGTCCCCTGCGCTaGTCCCCGCCACGGCCCTTG +
Preference number: 3 (lower is better)
Translates to: ELGEGPWNHPKGSLALLLAGPLR*SPPRPL
Trigger: CAAGGGCCGTGGCGGGGACAAGCGCAGGGGACCCGC...GAGAAGCAGCGCGAGTGAGCCTTTTGGGTGGTTCCAAGGCCCTTCACCAAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CAA 90 bp TCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACACCTTACCCTGGGGGATaGTTCTGGGTGCCCTCGGGG +
Preference number: 3 (lower is better)
Translates to: SDVTAVGELGSSFRPRGTPYPGG*FWVPSG
Trigger: CCCCGAGGGCACCCAGAACAATCCCCCAGGGTAAGG...TGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR GCA 72 bp CGCTGGGGTCTCTGCGCGTGCACGGGCCTCAACATATaGATGGACGTCCAGGTGCCACGTGGGCATCTCGTG +
Preference number: 3 (lower is better)
Translates to: RWGLCACTGLNI*MDVQVPRGHLV
Trigger: CACGAGATGCCCACGTGGCACCTGGACGTCCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 72 bp GGGGTCTCTGCGCGTGCACGGGCCTCAACATATGCATaGACGTCCAGGTGCCACGTGGGCATCTCGTGGTGC +
Preference number: 3 (lower is better)
Translates to: GVSARARASTYA*TSRCHVGISWC
Trigger: GCACCACGAGATGCCCACGTGGCACCTGGACGTCCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 72 bp ATACATAAGCCCTGGCGTGCGGGGCGGCTTCTGCGCTaGGGTCTCTGCGCGTGCACGGGCCTCAACATATGC +
Preference number: 3 (lower is better)
Translates to: IHKPWRAGRLLR*GLCACTGLNIC
Trigger: GCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAGAAGCCGCCCCGCACGCCAGGGCTTATGTAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR GCA 72 bp CAAGGCGGCCTCAGGCACTGGATGTGGTCCGAGTTCTaGCCTAAGCCCTTCCCATGCATTCGGGCGCCAGTG +
Preference number: 3 (lower is better)
Translates to: QGGLRHWMWSEF*PKPFPCIRAPV
Trigger: CACTGGCGCCCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR GCA 72 bp CGTGCACGGGCCTCAACATATGCATGGACGTCCAGGTaGCACGTGGGCATCTCGTGGTGCTGCAGAAGGCGG +
Preference number: 3 (lower is better)
Translates to: RARASTYAWTSR*HVGISWCCRRR
Trigger: CCGCCTTCTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATGCATATGTTGAGGCCCGTGCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 72 bp CCCTGGTGGAACCACTTGCCGTATGTCCTCGGGCGCTaGAGGTCTCCCAGCGCTGGCATACATAAGCCCTGG +
Preference number: 3 (lower is better)
Translates to: PWWNHLPYVLGR*RSPSAGIHKPW
Trigger: CCAGGGCTTATGTATGCCAGCGCTGGGAGACCTCCAGCGCCCGAGGACATACGGCAAGTGGTTCCACCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CCA 72 bp CATGGGTTCCCAGGTTGGCCTGCTAGGCTGACACCCTaGTGGAACCACTTGCCGTATGTCCTCGGGCGCTGG +
Preference number: 3 (lower is better)
Translates to: HGFPGWPARLTP*WNHLPYVLGRW
Trigger: CCAGCGCCCGAGGACATACGGCAAGTGGTTCCACCAGGGTGTCAGCCTAGCAGGCCAACCTGGGAACCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR-3UTR CAA 90 bp TCTGCCCTAAGCCCTTCCCATGCATTCGGGCGCCAGTGGCGAGCCAGATGGGTGGGAACAGGCTCCTCCTaGGTCAGCATTGGGGGTTCG +
Preference number: 3 (lower is better)
Translates to: SALSPSHAFGRQWRARWVGTGSS*VSIGGS
Trigger: CGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCC...CACCCATCTGGCTCGCCACTGGCGCCCGAATGCATGGGAAGGGCTTAGGGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR-3UTR CAA 90 bp GTGCACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCTTTAGGGGTCTTGGCTaGCTTGGGGAGCCCACTCAC +
Preference number: 3 (lower is better)
Translates to: VHPSPRPLARRPQALDVVFRGLG*LGEPTH
Trigger: GTGAGTGGGCTCCCCAAGCAAGCCAAGACCCCTAAA...GACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR GCA 72 bp TGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATaGATTCGGGCGCCAGTGGCGAGCCAGATGGGTGCT +
Preference number: 3 (lower is better)
Translates to: WMWSEFCPKPFP*IRAPVASQMGA
Trigger: AGCACCCATCTGGCTCGCCACTGGCGCCCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
3UTR-3UTR CAA 90 bp GAGCTTGGTGAAGGGCCTTGGAACCACCCAAAAGGCTCACTCGCGCTGCTTCTCGGGCTGAAAGGCCGCTaGTCCACATGGGTTCCCAGG +
Preference number: 3 (lower is better)
Translates to: ELGEGPWNHPKGSLALLLGLKGR*STWVPR
Trigger: CCTGGGAACCCATGTGGACAAGCGGCCTTTCAGCCC...GAGAAGCAGCGCGAGTGAGCCTTTTGGGTGGTTCCAAGGCCCTTCACCAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR TCA 72 bp CTTGTCCACATGGGTTCCCAGGTTGGCCTGCTAGGCTaGCACCCTGGTGGAACCACTTGCCGTATGTCCTCG +
Preference number: 3 (lower is better)
Translates to: LVHMGSQVGLLG*HPGGTTCRMSS
Trigger: CGAGGACATACGGCAAGTGGTTCCACCAGGGTGTCAGCCTAGCAGGCCAACCTGGGAACCCATGTGGACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR TCA 72 bp AGCCTCCTGAGGGGCTCTGTCTTCAGCCCCTTCTCGTaGAGGGCTCTCCTCGTCATTCTCACTCCCGAATCC +
Preference number: 3 (lower is better)
Translates to: SLLRGSVFSPFS*RALLVILTPES
Trigger: GGATTCGGGAGTGAGAATGACGAGGAGAGCCCTTCACGAGAAGGGGCTGAAGACAGAGCCCCTCAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574418.5
3UTR-3UTR CAA 90 bp TGGAATGGAGCTTCCTTCACCAACATCACCCTGGTGACGACTGAGAAAAGGTCAGAGGCTTTAGGGGTCTaGGCTTGCTTGGGGAGCCCA +
Preference number: 3 (lower is better)
Translates to: WNGASFTNITLVTTEKRSEALGV*ACLGSP
Trigger: TGGGCTCCCCAAGCAAGCCAAGACCCCTAAAGCCTC...TGACCTTTTCTCAGTCGTCACCAGGGTGATGTTGGTGAAGGAAGCTCCATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR GCA 72 bp GTCATGGAGAATAACTGGGCCCTTTCTGTTGAGCAGTaGCACAGCAGGCCTTGCAGTTTTTGGTGCATCTCA +
Preference number: 3 (lower is better)
Translates to: VMENNWALSVEQ*HSRPCSFWCIS
Trigger: TGAGATGCACCAAAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTCCATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR GCA 72 bp CACCGCACCCGGCCTCAATATTTGAAGCGCTGGTTATaGGATGTGTGGTTGTTGTCATGGAGAATAACTGGG +
Preference number: 3 (lower is better)
Translates to: HRTRPQYLKRWL*DVWLLSWRITG
Trigger: CCCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAAATATTGAGGCCGGGTGCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR CCA 72 bp GTTATGCGATGTGTGGTTGTTGTCATGGAGAATAACTaGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: VMRCVVVVMENN*ALSVEQCHSRP
Trigger: AGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTCCATGACAACAACCACACATCGCATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR CCA 72 bp TTGAAGCGCTGGTTATGCGATGTGTGGTTGTTGTCATaGAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCC +
Preference number: 3 (lower is better)
Translates to: LKRWLCDVWLLS*RITGPFLLSSA
Trigger: GGCACTGCTCAACAGAAAGGGCCCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR CCA 72 bp CGGCCTCAATATTTGAAGCGCTGGTTATGCGATGTGTaGTTGTTGTCATGGAGAATAACTGGGCCCTTTCTG +
Preference number: 3 (lower is better)
Translates to: RPQYLKRWLCDV*LLSWRITGPFL
Trigger: CAGAAAGGGCCCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAAATATTGAGGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR TCA 72 bp AGGCCTTGCAGTTTTTGGTGCATCTCATCGATTTGCTaGGCATACTTCTCAGATGTAATGGTTTCACTGGGA +
Preference number: 3 (lower is better)
Translates to: RPCSFWCISSIC*AYFSDVMVSLG
Trigger: TCCCAGTGAAACCATTACATCTGAGAAGTATGCTCAGCAAATCGATGAGATGCACCAAAAACTGCAAGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR TCA 72 bp GCAGATAATGAGAATATCCATGCCACAGGGATGCAGTaGGAACTAAATTACATCAGTCACAATGCCTGGTAC +
Preference number: 3 (lower is better)
Translates to: ADNENIHATGMQ*ELNYISHNAWY
Trigger: GTACCAGGCATTGTGACTGATGTAATTTAGTTCTCACTGCATCCCTGTGGCATGGATATTCTCATTATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR GCA 72 bp AGGGATGCAGTGAGAACTAAATTACATCAGTCACAATaGCTGGTACAGAGTAAACCCTTGATAAATGGGAGG +
Preference number: 3 (lower is better)
Translates to: RDAVRTKLHQSQ*LVQSKPLINGR
Trigger: CCTCCCATTTATCAAGGGTTTACTCTGTACCAGGCATTGTGACTGATGTAATTTAGTTCTCACTGCATCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR TCA 72 bp TCCAGAATTCCATGGGCTGAACCTAAAGCATTGGCTTaGAGCGTGAAATTTCTGTCATCTCAATCATTGGTA +
Preference number: 3 (lower is better)
Translates to: SRIPWAEPKALA*SVKFLSSQSLV
Trigger: TACCAATGATTGAGATGACAGAAATTTCACGCTTCAAGCCAATGCTTTAGGTTCAGCCCATGGAATTCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CAA 72 bp GCTGCAGAAGGCGGGAGGCCGGCGGGTCCCCTGCGCTaGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCG +
Preference number: 4 (lower is better)
Translates to: AAEGGRPAGPLR*SPPRPLPAVDP
Trigger: CGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGGGACCCGCCGGCCTCCCGCCTTCTGCAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp CTGCAGAAGGCGGGAGGCCGGCGGGTCCCCTGCGCTTGTCCCCGCCACGGCCCTCTCTGCCCCGCCACCTaGCCGCCTTCGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LQKAGGRRVPCACPRHGPLCPAT*PPSLLL
Trigger: GAGGAGGAGCGAAGGCGGGCAGGTGGCGGGGCAGAG...AGGGCCGTGGCGGGGACAAGCGCAGGGGACCCGCCGGCCTCCCGCCTTCTGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp CCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGCCGGCAGGACTCTCCCCCGGGAGCTCTaGTGTCCGGCACCGCCATGG +
Preference number: 4 (lower is better)
Translates to: PRHGPCPLWTRRLSAGRTLPREL*CPAPPW
Trigger: CCATGGCGGTGCCGGACACCAGAGCTCCCGGGGGAG...AGTCCTGCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp GCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGCCGGCGGGCGGCTTCTGCGCTaGGGTCTCTGCGCGTGCACG +
Preference number: 4 (lower is better)
Translates to: ACPRHGPCPLWTRRLSAGGRLLR*GLCACT
Trigger: CGTGCACGCGCAGAGACCCCAGCGCAGAAGCCGCCC...GCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp CCCTGCGCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGGCGAGGCAGCCCAGTaGACCCCTCCCCTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PCACPRHGPCPLWTRRLSGEAAQ*TPPLGL
Trigger: GAGGCCTAGGGGAGGGGTGCACTGGGCTGCCTCGCC...ACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp CCGGCGGGTCCCCTGCGCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGCATGGACGTCCAGGTaGCACGTGGGCATCTCGTGG +
Preference number: 4 (lower is better)
Translates to: PAGPLRLSPPRPLPAVDPAWTSR*HVGISW
Trigger: CCACGAGATGCCCACGTGGCACCTGGACGTCCATGC...CGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGGGACCCGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp CCCTGCGCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGTGCGGGGCGGCTTCTaGGCTGGGGTCTCTGCGCGT +
Preference number: 4 (lower is better)
Translates to: PCACPRHGPCPLWTRRLSVRGGF*AGVSAR
Trigger: ACGCGCAGAGACCCCAGCGCAGAAGCCGCCCCGCAC...ACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp CCCTGCGCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGGGAGGGTGGCCGCATaGGTGCGTGAGGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PCACPRHGPCPLWTRRLSGRVAA*VREEVG
Trigger: GCCCACCTCCTCACGCACCCATGCGGCCACCCTCCC...ACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp CTGCAGAAGGCGGGAGGCCGGCGGGTCCCCTGCGCTTGTCCCCGCCACGGCCCTGGCATACATAAGCCCTaGCGTGCGGGGCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LQKAGGRRVPCACPRHGPGIHKP*RAGRLL
Trigger: CAGAAGCCGCCCCGCACGCCAGGGCTTATGTATGCC...AGGGCCGTGGCGGGGACAAGCGCAGGGGACCCGCCGGCCTCCCGCCTTCTGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp GCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGCCGGCCACGTGGGCATCTCGTaGTGCTGCAGAAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: ACPRHGPCPLWTRRLSAGHVGIS*CCRRRE
Trigger: CTCCCGCCTTCTGCAGCACCACGAGATGCCCACGTG...GCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp GCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGCCGGCGGCCGCTTGTCCACATaGGTTCCCAGGTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ACPRHGPCPLWTRRLSAGGRLST*VPRLAC
Trigger: GCAGGCCAACCTGGGAACCCATGTGGACAAGCGGCC...GCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp CCGGCGGGTCCCCTGCGCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGTTCAGCCCCTTCTCGTaGAGGGCTCTCCTCGTCATT +
Preference number: 4 (lower is better)
Translates to: PAGPLRLSPPRPLPAVDPFSPFS*RALLVI
Trigger: AATGACGAGGAGAGCCCTTCACGAGAAGGGGCTGAA...CGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGGGACCCGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp CCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGCCGGCAGGACTTGTTACCGCGGTGGGTaGGCTGGGAAGCTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: PRHGPCPLWTRRLSAGRTCYRGG*AGKLFP
Trigger: CGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACA...AGTCCTGCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp GTGCACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCGTGCCCTCGGGGCCTTaGTGCCTCCCCCGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VHPSPRPLARRPQALDVVVPSGP*CLPREL
Trigger: GAGCTCCCGGGGGAGGCAGCAAGGCCCCGAGGGCAC...GACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR TCA 90 bp TCTGCCCTAAGCCCTTCCCATGCATTCGGGCGCCAGTGGCGAGCCAGATGGGTGTGGGGGTCCGGCAGGTaGCACAGGGCGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SALSPSHAFGRQWRARWVWGSGR*HRAAGL
Trigger: CAGCCCAGCCGCCCTGTGTCACCTGCCGGACCCCCA...CACCCATCTGGCTCGCCACTGGCGCCCGAATGCATGGGAAGGGCTTAGGGCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR GCA 90 bp CCCTGCGCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTTTGGGGGTTCGTCGGTaGTGCCAGCAGTTATGCCCC +
Preference number: 4 (lower is better)
Translates to: PCACPRHGPCPLWTRRLSLGVRR*CQQLCP
Trigger: GGGGCATAACTGCTGGCAGCACCGACGAACCCCCAA...ACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp TCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACAGTGCCCTCGGGGCCTTaGTGCCTCCCCCGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SDVTAVGELGSSFRPRGTVPSGP*CLPREL
Trigger: GAGCTCCCGGGGGAGGCAGCAAGGCCCCGAGGGCAC...TGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp TCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGCTCCCCCGGGAGCTCTaGTGTCCGGCACCGCCATGG +
Preference number: 4 (lower is better)
Translates to: SPSDVTAVGELGSSFRPRLPREL*CPAPPW
Trigger: CCATGGCGGTGCCGGACACCAGAGCTCCCGGGGGAG...CCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR TCA 90 bp GGGCAGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAGTTGGCCTGCTAGGCTaGCACCCTGGTGGAACCACT +
Preference number: 4 (lower is better)
Translates to: GQVWGRSPSDVTAVGELGVGLLG*HPGGTT
Trigger: AGTGGTTCCACCAGGGTGTCAGCCTAGCAGGCCAAC...TCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp GCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGCCGGCGGCTCTGTGCCCTTTTaGAGGGAACCTTCCGAATGG +
Preference number: 4 (lower is better)
Translates to: ACPRHGPCPLWTRRLSAGGSVPF*REPSEW
Trigger: CCATTCGGAAGGTTCCCTGCAAAAGGGCACAGAGCC...GCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp AGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTGGGGTTCGTCGGTGCTaGCAGCAGTTATGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: RCGAARPPMLPRWVSWEAGVRRC*QQLCPR
Trigger: CCGGGGGCATAACTGCTGGCAGCACCGACGAACCCC...AGCTTCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR GCA 90 bp CCGCCATGGAACTGGGCCGGACATTTGTCCGGAGGCCCCTCCTGGGCAGGAGCCGGCGAGCCAGATGGGTaGTGTGGCCTTAGGTTCGGG +
Preference number: 4 (lower is better)
Translates to: PPWNWAGHLSGGPSWAGAGEPDG*CGLRFG
Trigger: CCCGAACCTAAGGCCACAGCACCCATCTGGCTCGCC...GGCTCCTGCCCAGGAGGGGCCTCCGGACAAATGTCCGGCCCAGTTCCATGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR GCA 90 bp CGGGCGCCTGGGCTGAAAGGCCGCTTGTCCACATGGGTTCCCAGGTTGGCCTGCGTGGGCATCTCGTGGTaGTGCAGAAGGCGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RAPGLKGRLSTWVPRLACVGISW*CRRREA
Trigger: GGCCTCCCGCCTTCTGCAGCACCACGAGATGCCCAC...GCAGGCCAACCTGGGAACCCATGTGGACAAGCGGCCTTTCAGCCCAGGCGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp GTGCGGGGCGGCTTCTGCGCTGGGGTCTCTGCGCGTGCACGGGCCTCAACATATCCACCAGCTCAGGGCTaGGCCAGAAGTCTCCACGCC +
Preference number: 4 (lower is better)
Translates to: VRGGFCAGVSARARASTYPPAQG*ARSLHA
Trigger: GGCGTGGAGACTTCTGGCGCAGCCCTGAGCTGGTGG...ATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAGAAGCCGCCCCGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp TCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGCTCTTGGCCCAGCCGTaGGGGCTGAGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SPSDVTAVGELGSSFRPRLLAQP*GLSLLR
Trigger: CCTGAGGAGGCTCAGCCCCCACGGCTGGGCCAAGAG...CCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp GGGCAGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGACACCTCCCCTTACCCTaGGGGATTGTTCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GQVWGRSPSDVTAVGELGHLPLP*GIVLGA
Trigger: GGCACCCAGAACAATCCCCCAGGGTAAGGGGAGGTG...TCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp GGGCAGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAGGCACAGGTAGTGGCTaGATCTTGGGGCAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GQVWGRSPSDVTAVGELGGTGSG*ILGQPR
Trigger: CCTTGGCTGCCCCAAGATCCAGCCACTACCTGTGCC...TCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp CACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCCGAGGCAGGCGCCTCGCATaGCACACTCAGACCGCTGGG +
Preference number: 4 (lower is better)
Translates to: HPSPRPLARRPQALDVVRGRRLA*HTQTAG
Trigger: CCCAGCGGTCTGAGTGTGCCATGCGAGGCGCCTGCC...TCGGACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp GATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACAGGTCCCGAGGCGGGCGCCTaGGCTGAAAGGCCGCTTGTC +
Preference number: 4 (lower is better)
Translates to: DVTAVGELGSSFRPRGTGPEAGA*AERPLV
Trigger: GACAAGCGGCCTTTCAGCCCAGGCGCCCGCCTCGGG...ACCTGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp TCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACAGGCGGGCGCCTGGGCTaGAAGGCCGCTTGTCCACAT +
Preference number: 4 (lower is better)
Translates to: SDVTAVGELGSSFRPRGTGGRLG*KAACPH
Trigger: ATGTGGACAAGCGGCCTTTCAGCCCAGGCGCCCGCC...TGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp CCCTGCGCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTCTGGGGATCCACCACTaGCACCCACTTGAAGATACG +
Preference number: 4 (lower is better)
Translates to: PCACPRHGPCPLWTRRLSLGIHH*HPLEDT
Trigger: CGTATCTTCAAGTGGGTGCCAGTGGTGGATCCCCAG...ACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp TCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACACTCTTGGCCCAGCCGTaGGGGCTGAGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SDVTAVGELGSSFRPRGTLLAQP*GLSLLR
Trigger: CCTGAGGAGGCTCAGCCCCCACGGCTGGGCCAAGAG...TGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp AGGTTAGGCCACCAGCTCAGGGCTGCGCCAGAAGTCTCCACGCCTCCACCCGAGGCACACTCAGACCGCTaGGAGGGTGGCCGCATGGGT +
Preference number: 4 (lower is better)
Translates to: RLGHQLRAAPEVSTPPPEAHSDR*EGGRMG
Trigger: ACCCATGCGGCCACCCTCCCAGCGGTCTGAGTGTGC...CTCGGGTGGAGGCGTGGAGACTTCTGGCGCAGCCCTGAGCTGGTGGCCTAACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp TCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGTATGTCCTCGGGCGCTaGAGGTCTCCCAGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPSDVTAVGELGSSFRPRYVLGR*RSPSAG
Trigger: GCCAGCGCTGGGAGACCTCCAGCGCCCGAGGACATA...CCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp AGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGCGGCCACGGGATCTCTCTaGCCCGCCACCTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: RHWMWSEFCPKPFPCIRAATGSL*PATCPP
Trigger: AGGCGGGCAGGTGGCGGGGCAGAGAGATCCCGTGGC...CGCCCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp GGGCAGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGACAGGACTGGGCTCTGTaGCCTTTTGCAGGGAACCTT +
Preference number: 4 (lower is better)
Translates to: GQVWGRSPSDVTAVGELGQDWAL*PFAGNL
Trigger: AAGGTTCCCTGCAAAAGGGCACAGAGCCCAGTCCTG...TCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp GGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGCGCGACCCGGAGGCTCAGTaGCGGCAGGACTCGGGACTC +
Preference number: 4 (lower is better)
Translates to: GTGCGPSSALSPSHAFGRDPEAQ*RQDSGL
Trigger: GAGTCCCGAGTCCTGCCGGCACTGAGCCTCCGGGTC...GCGCCCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp TATGCATGGACGTCCAGGTGCCACGTGGGCATCTCGTGGTGCTGCAGAAGGCGGCTGCGCTGGGGTCTCTaGGCGTGCACGGGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: YAWTSRCHVGISWCCRRRLRWGL*ACTGLN
Trigger: GTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAG...CCGCCTTCTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATGCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp GCCGGCAGGACTCGGGACTCGGCGCCTCTCCCGGGGTGGCAGGCGCCTCGCATGCACAAGAAGTGGTACTaGATTGCTGACTTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: AGRTRDSAPLPGWQAPRMHKKWY*IADFGQ
Trigger: CTGCCCAAAGTCAGCAATGCAGTACCACTTCTTGTG...CATGCGAGGCGCCTGCCACCCCGGGAGAGGCGCCGAGTCCCGAGTCCTGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp AGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTTGTCCGGCACCGCCATaGAACTGGGCCGGACATTTG +
Preference number: 4 (lower is better)
Translates to: RCGAARPPMLPRWVSWEACPAPP*NWAGHL
Trigger: CAAATGTCCGGCCCAGTTCCATGGCGGTGCCGGACA...AGCTTCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp TCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACACCTGGGGGATTGTTCTaGGTGCCCTCGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SDVTAVGELGSSFRPRGTPGGLF*VPSGPC
Trigger: GCAAGGCCCCGAGGGCACCCAGAACAATCCCCCAGG...TGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp CATGGACGTCCAGGTGCCACGTGGGCATCTCGTGGTGCTGCAGAAGGCGGGAGGGGGTCTTGGCTTGCTTaGGGAGCCCACTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: HGRPGATWASRGAAEGGRGSWLA*GAHSPP
Trigger: GGGAGGTGAGTGGGCTCCCCAAGCAAGCCAAGACCC...CCTCCCGCCTTCTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CAA 72 bp GGTTGGCCTGCTAGGCTGACACCCTGGTGGAACCACTaGCCGTATGTCCTCGGGCGCTGGAGGTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GWPARLTPWWNH*PYVLGRWRSPS
Trigger: GCTGGGAGACCTCCAGCGCCCGAGGACATACGGCAAGTGGTTCCACCAGGGTGTCAGCCTAGCAGGCCAACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp GATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACAGGTGGCGAGCCAGATGGGTaGTGTGGCCTTAGGTTCGGG +
Preference number: 4 (lower is better)
Translates to: DVTAVGELGSSFRPRGTGGEPDG*CGLRFG
Trigger: CCCGAACCTAAGGCCACAGCACCCATCTGGCTCGCC...ACCTGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR GCA 90 bp GAGGGGCTCTGTCTTCAGCCCCTTCTCGTGAAGGGCTCTCCTCGTCATTCTCACGGCGAGGCAGCCCAGTaGACCCCTCCCCTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: EGLCLQPLLVKGSPRHSHGEAAQ*TPPLGL
Trigger: GAGGCCTAGGGGAGGGGTGCACTGGGCTGCCTCGCC...GTGAGAATGACGAGGAGAGCCCTTCACGAGAAGGGGCTGAAGACAGAGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CCA 90 bp GCGCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGCCGAGGGAACCTTCCGAATaGAAACTCTGGTTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: ALVPATALARCGPGGSVPREPSE*KLWLLF
Trigger: GAACAGCAACCAGAGTTTCCATTCGGAAGGTTCCCT...CGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp AGGTTAGGCCACCAGCTCAGGGCTGCGCCAGAAGTCTCCACGCCTCCACCCGAGTGTCCGGCACCGCCATaGAACTGGGCCGGACATTTG +
Preference number: 4 (lower is better)
Translates to: RLGHQLRAAPEVSTPPPECPAPP*NWAGHL
Trigger: CAAATGTCCGGCCCAGTTCCATGGCGGTGCCGGACA...CTCGGGTGGAGGCGTGGAGACTTCTGGCGCAGCCCTGAGCTGGTGGCCTAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp GGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGCGCCCTGGGGGATTGTTCTaGGTGCCCTCGGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GTGCGPSSALSPSHAFGRPGGLF*VPSGPC
Trigger: GCAAGGCCCCGAGGGCACCCAGAACAATCCCCCAGG...GCGCCCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp CATGGACGTCCAGGTGCCACGTGGGCATCTCGTGGTGCTGCAGAAGGCGGGAGGCACCTCCCCTTACCCTaGGGGATTGTTCTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: HGRPGATWASRGAAEGGRHLPLP*GIVLGA
Trigger: GGCACCCAGAACAATCCCCCAGGGTAAGGGGAGGTG...CCTCCCGCCTTCTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp GGTGAAGGGCCTTGGAACCACCCAAAAGGCTCACTCGCGCTGCTTCTCGGGCTAGGCAGGCGCCTCGCATaGCACACTCAGACCGCTGGG +
Preference number: 4 (lower is better)
Translates to: GEGPWNHPKGSLALLLGLGRRLA*HTQTAG
Trigger: CCCAGCGGTCTGAGTGTGCCATGCGAGGCGCCTGCC...TAGCCCGAGAAGCAGCGCGAGTGAGCCTTTTGGGTGGTTCCAAGGCCCTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp TCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACACGTCCAGGTGCCACGTaGGCATCTCGTGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SDVTAVGELGSSFRPRGTRPGAT*ASRGAA
Trigger: TGCAGCACCACGAGATGCCCACGTGGCACCTGGACG...TGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp GCGCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGCCGGCCACAGGGATGCAGTaGGAACTAAATTACATCAGT +
Preference number: 4 (lower is better)
Translates to: ALVPATALARCGPGGSVPATGMQ*ELNYIS
Trigger: ACTGATGTAATTTAGTTCTCACTGCATCCCTGTGGC...CGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp TCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGTTAGGGGTCTTGGCTTaGTTGGGGAGCCCACTCACC +
Preference number: 4 (lower is better)
Translates to: SPSDVTAVGELGSSFRPRLGVLA*LGSPLT
Trigger: GGTGAGTGGGCTCCCCAAGCAAGCCAAGACCCCTAA...CCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR GCA 90 bp GGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGCGCCCTAAGCCCTTCCCATaGATTCGGGCGCCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: GTGCGPSSALSPSHAFGRPKPFP*IRAPVA
Trigger: CGCCACTGGCGCCCGAATGCATGGGAAGGGCTTAGG...GCGCCCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR GCA 90 bp AGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTATGTGGTCCGAGTTCTaGCCTAAGCCCTTCCCATGC +
Preference number: 4 (lower is better)
Translates to: RCGAARPPMLPRWVSWEAMWSEF*PKPFPC
Trigger: GCATGGGAAGGGCTTAGGGCAGAACTCGGACCACAT...AGCTTCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR GCA 90 bp CGTATGTCCTCGGGCGCTGGAGGTCTCCCAGCGCTGGCATACATAAGCCCTGGCCCTGGTGGAACCACTTaGCGTATGTCCTCGGGCGCT +
Preference number: 4 (lower is better)
Translates to: RMSSGAGGLPALAYISPGPGGTT*RMSSGA
Trigger: AGCGCCCGAGGACATACGGCAAGTGGTTCCACCAGG...GCCAGGGCTTATGTATGCCAGCGCTGGGAGACCTCCAGCGCCCGAGGACATACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp AGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTGGGGATCCACCACTaGCACCCACTTGAAGATACG +
Preference number: 4 (lower is better)
Translates to: RCGAARPPMLPRWVSWEALGIHH*HPLEDT
Trigger: CGTATCTTCAAGTGGGTGCCAGTGGTGGATCCCCAG...AGCTTCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp TCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACACTCCTTGGTCAGCATTaGGGGTTCGTCGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SDVTAVGELGSSFRPRGTLLGQH*GFVGAA
Trigger: GGCAGCACCGACGAACCCCCAATGCTGACCAAGGAG...TGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp GGCCTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTAGACCGCTGGGAGGGTaGCCGCATGGGTGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GLRHWMWSEFCPKPFPCIRPLGG*PHGCVR
Trigger: CCTCACGCACCCATGCGGCCACCCTCCCAGCGGTCT...AATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp CGGGCGCCTGGGCTGAAAGGCCGCTTGTCCACATGGGTTCCCAGGTTGGCCTGCAGGCTGACACCCTGGTaGAACCACTTGCCGTATGTC +
Preference number: 4 (lower is better)
Translates to: RAPGLKGRLSTWVPRLACRLTPW*NHLPYV
Trigger: GACATACGGCAAGTGGTTCCACCAGGGTGTCAGCCT...GCAGGCCAACCTGGGAACCCATGTGGACAAGCGGCCTTTCAGCCCAGGCGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp CGTATGTCCTCGGGCGCTGGAGGTCTCCCAGCGCTGGCATACATAAGCCCTGGCCATGGGTTCCCAGGTTaGCCTGCTAGGCTGACACCC +
Preference number: 4 (lower is better)
Translates to: RMSSGAGGLPALAYISPGHGFPG*PARLTP
Trigger: GGGTGTCAGCCTAGCAGGCCAACCTGGGAACCCATG...GCCAGGGCTTATGTATGCCAGCGCTGGGAGACCTCCAGCGCCCGAGGACATACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp TCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGTTCAGCCCCTTCTCGTaGAGGGCTCTCCTCGTCATT +
Preference number: 4 (lower is better)
Translates to: SPSDVTAVGELGSSFRPRFSPFS*RALLVI
Trigger: AATGACGAGGAGAGCCCTTCACGAGAAGGGGCTGAA...CCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR GCA 90 bp CTCAACATATGCATGGACGTCCAGGTGCCACGTGGGCATCTCGTGGTGCTGCAGGGGGTTCGTCGGTGCTaGCAGCAGTTATGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LNICMDVQVPRGHLVVLQGVRRC*QQLCPR
Trigger: CCGGGGGCATAACTGCTGGCAGCACCGACGAACCCC...CTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATGCATATGTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp GCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCTCCTTGGTCAGCATTaGGGGTTCGTCGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ASSKAASGTGCGPSSALSLLGQH*GFVGAA
Trigger: GGCAGCACCGACGAACCCCCAATGCTGACCAAGGAG...GCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp CGTATGTCCTCGGGCGCTGGAGGTCTCCCAGCGCTGGCATACATAAGCCCTGGCCCGATGTTACCGCGGTaGGTGAGCTGGGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RMSSGAGGLPALAYISPGPMLPR*VSWEAL
Trigger: AAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGG...GCCAGGGCTTATGTATGCCAGCGCTGGGAGACCTCCAGCGCCCGAGGACATACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp TCTGGAACAGGCTCCTCCTTGGTCAGCATTGGGGGTTCGTCGGTGCTGCCAGCAGGCGGCCTCAGGCACTaGATGTGGTCCGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SGTGSSLVSIGGSSVLPAGGLRH*MWSEFC
Trigger: GCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCC...TGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR GCA 90 bp AGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGCGTTGGGGGTTCGTCGGTaGTGCCAGCAGTTATGCCCC +
Preference number: 4 (lower is better)
Translates to: RHWMWSEFCPKPFPCIRALGVRR*CQQLCP
Trigger: GGGGCATAACTGCTGGCAGCACCGACGAACCCCCAA...CGCCCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR GCA 90 bp GAGGGGCTCTGTCTTCAGCCCCTTCTCGTGAAGGGCTCTCCTCGTCATTCTCACCCTAAGCCCTTCCCATaGATTCGGGCGCCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: EGLCLQPLLVKGSPRHSHPKPFP*IRAPVA
Trigger: CGCCACTGGCGCCCGAATGCATGGGAAGGGCTTAGG...GTGAGAATGACGAGGAGAGCCCTTCACGAGAAGGGGCTGAAGACAGAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR GCA 90 bp TCTTTCCGCCCTCGGGGCACAGGTAGTGGCTGGATCTTGGGGCAGCCAAGGGAGACGGGCCTCAACATATaGATGGACGTCCAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SFRPRGTGSGWILGQPRETGLNI*MDVQVP
Trigger: TGGCACCTGGACGTCCATGCATATGTTGAGGCCCGT...CTCCCTTGGCTGCCCCAAGATCCAGCCACTACCTGTGCCCCGAGGGCGGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp AAGGCGGCCTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGGCTCTGTGCCCTTTTaGAGGGAACCTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KAASGTGCGPSSALSPSHGSVPF*REPPPG
Trigger: CCCAGGAGGAGGTTCCCTGCAAAAGGGCACAGAGCC...ATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CCA 90 bp CTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGGGTCTTGGCTTGCTTaGGGAGCCCACTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: LRHWMWSEFCPKPFPCIRGSWLA*GAHSPP
Trigger: GGGAGGTGAGTGGGCTCCCCAAGCAAGCCAAGACCC...CCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp GGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGCGCCCGATGTTACCGCGGTaGGTGAGCTGGGAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GTGCGPSSALSPSHAFGRPMLPR*VSWEAL
Trigger: AAGAGCTTCCCAGCTCACCCACCGCGGTAACATCGG...GCGCCCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp GATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACAGGTCTCAGGCACTGGATGTaGTCCGAGTTCTGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: DVTAVGELGSSFRPRGTGLRHWM*SEFCPK
Trigger: CTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAG...ACCTGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp ATTCTCACTCCCGAATCCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTTGGGGAGGGTGGCCGCATaGGTGCGTGAGGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ILTPESSASSSSGTGSSLGRVAA*VREEVG
Trigger: GCCCACCTCCTCACGCACCCATGCGGCCACCCTCCC...CAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGGATTCGGGAGTGAGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR TCA 90 bp TCTTTCCGCCCTCGGGGCACAGGTAGTGGCTGGATCTTGGGGCAGCCAAGGGAGCCACTGGCACCCACTTaGAGATACGAAGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SFRPRGTGSGWILGQPREPLAPT*RYEGKC
Trigger: ACACTTCCCTTCGTATCTTCAAGTGGGTGCCAGTGG...CTCCCTTGGCTGCCCCAAGATCCAGCCACTACCTGTGCCCCGAGGGCGGAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR GCA 90 bp CTCAACATATGCATGGACGTCCAGGTGCCACGTGGGCATCTCGTGGTGCTGCAGTGGGGTCTCTGCGCGTaGACGGGCCTCAACATATGC +
Preference number: 4 (lower is better)
Translates to: LNICMDVQVPRGHLVVLQWGLCA*TGLNIC
Trigger: GCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCA...CTGCAGCACCACGAGATGCCCACGTGGCACCTGGACGTCCATGCATATGTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp AAGGCGGCCTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATCAGGACTGGGCTCTGTaGCCTTTTGCAGGGAACCTC +
Preference number: 4 (lower is better)
Translates to: KAASGTGCGPSSALSPSHQDWAL*PFAGNL
Trigger: GAGGTTCCCTGCAAAAGGGCACAGAGCCCAGTCCTG...ATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CCA 90 bp AAGGCGGCCTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGTAGTGGCTGGATCTTaGGGCAGCCAAGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: KAASGTGCGPSSALSPSHVVAGS*GSQGRL
Trigger: AAGCCTCCCTTGGCTGCCCCAAGATCCAGCCACTAC...ATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp ATTCTCACTCCCGAATCCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTTGGGGTGCGTGAGGAGGTaGGCGAGGCAGCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: ILTPESSASSSSGTGSSLGCVRR*ARQPSA
Trigger: TGCACTGGGCTGCCTCGCCCACCTCCTCACGCACCC...CAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGGATTCGGGAGTGAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CCA 90 bp AATCCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTTGGTCAGCATTGGGGGCACACTCAGACCGCTaGGAGGGTGGCCGCATGGGT +
Preference number: 4 (lower is better)
Translates to: NPQLPAVLEQAPPWSALGAHSDR*EGGRMG
Trigger: ACCCATGCGGCCACCCTCCCAGCGGTCTGAGTGTGC...CCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CCA 90 bp CGTATGTCCTCGGGCGCTGGAGGTCTCCCAGCGCTGGCATACATAAGCCCTGGCCTTGGTGAAGGGCCTTaGAACCACCCAAAAGGCTCA +
Preference number: 4 (lower is better)
Translates to: RMSSGAGGLPALAYISPGLGEGP*NHPKGS
Trigger: TGAGCCTTTTGGGTGGTTCCAAGGCCCTTCACCAAG...GCCAGGGCTTATGTATGCCAGCGCTGGGAGACCTCCAGCGCCCGAGGACATACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
3UTR CAA 72 bp TCCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTaGGTCAGCATTGGGGGTTCGTCGGTGCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSASSSSGTGSS*VSIGGSSVLPA
Trigger: TGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR TCA 90 bp GATGTTACCGCGGTGGGTGAGCTGGGAAGCTCTTTCCGCCCTCGGGGCACAGGTCCAACATCACCCTGGTaGCGACTGAGAAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: DVTAVGELGSSFRPRGTGPTSPW*RLRKGH
Trigger: ATGACCTTTTCTCAGTCGTCACCAGGGTGATGTTGG...ACCTGTGCCCCGAGGGCGGAAAGAGCTTCCCAGCTCACCCACCGCGGTAACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp GGTGAAGGGCCTTGGAACCACCCAAAAGGCTCACTCGCGCTGCTTCTCGGGCTAGCTAGGCTGACACCCTaGTGGAACCACTTGCCGTAT +
Preference number: 4 (lower is better)
Translates to: GEGPWNHPKGSLALLLGLARLTP*WNHLPY
Trigger: ATACGGCAAGTGGTTCCACCAGGGTGTCAGCCTAGC...TAGCCCGAGAAGCAGCGCGAGTGAGCCTTTTGGGTGGTTCCAAGGCCCTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp GGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGCGCCACCCTGGTGACGACTaGGAAAAGGTCATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GTGCGPSSALSPSHAFGRHPGDD*EKVIPE
Trigger: TTCTGGAATGACCTTTTCTCAGTCGTCACCAGGGTG...GCGCCCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp CCCCTTCTCGTGAAGGGCTCTCCTCGTCATTCTCACTCCCGAATCCTCAGCTTCTTAGGGGTCTTGGCTTaGTTGGGGAGCCCACTCACC +
Preference number: 4 (lower is better)
Translates to: PLLVKGSPRHSHSRILSFLGVLA*LGSPLT
Trigger: GGTGAGTGGGCTCCCCAAGCAAGCCAAGACCCCTAA...GAAGCTGAGGATTCGGGAGTGAGAATGACGAGGAGAGCCCTTCACGAGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CCA 90 bp AATCCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTTGGTCAGCATTGGGGGCACCGCCATGGAACTaGGCCGGACATTTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: NPQLPAVLEQAPPWSALGAPPWN*AGHLSG
Trigger: TCCGGACAAATGTCCGGCCCAGTTCCATGGCGGTGC...CCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CCA 90 bp AATCCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTTGGTCAGCATTGGGGGGCACAGGTAGTGGCTaGATCTTGGGGCAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: NPQLPAVLEQAPPWSALGGTGSG*ILGQPR
Trigger: CCTTGGCTGCCCCAAGATCCAGCCACTACCTGTGCC...CCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGGATT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CCA 90 bp GGCCTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCTCAGGCACTGGATGTaGTCCGAGTTCTGCCCTAAG +
Preference number: 4 (lower is better)
Translates to: GLRHWMWSEFCPKPFPCILRHWM*SEFCPK
Trigger: CTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAG...AATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CCA 90 bp TGGAATGGAGCTTCCTTCACCAACATCACCCTGGTGACGACTGAGAAAAGGTCAAGACCGCTGGGAGGGTaGCCGCATGGGTGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: WNGASFTNITLVTTEKRSRPLGG*PHGCVR
Trigger: CCTCACGCACCCATGCGGCCACCCTCCCAGCGGTCT...TGACCTTTTCTCAGTCGTCACCAGGGTGATGTTGGTGAAGGAAGCTCCATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp GGCCTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTGCCTCAACATATGCATaGACGTCCAGGTGCCACGTG +
Preference number: 4 (lower is better)
Translates to: GLRHWMWSEFCPKPFPCIASTYA*TSRCHV
Trigger: CACGTGGCACCTGGACGTCCATGCATATGTTGAGGC...AATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp GGGCCTTGGAACCACCCAAAAGGCTCACTCGCGCTGCTTCTCGGGCTAGGATTTCCACTGGCACCCACTTaGAGATACGAAGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: GPWNHPKGSLALLLGLGFPLAPT*RYEGKC
Trigger: ACACTTCCCTTCGTATCTTCAAGTGGGTGCCAGTGG...AAATCCTAGCCCGAGAAGCAGCGCGAGTGAGCCTTTTGGGTGGTTCCAAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp GCTGGGGTCTCTGCGCGTGCACGGGCCTCAACATATGCATGGACGTCCAGGTGCCATTGGTACGAATGTTaGCTTTCATCCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: AGVSARARASTYAWTSRCHWYEC*LSSQGV
Trigger: TACTCCCTGGGATGAAAGTCAACATTCGTACCAATG...GCACCTGGACGTCCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp AGGTTAGGCCACCAGCTCAGGGCTGCGCCAGAAGTCTCCACGCCTCCACCCGAGCCTAAAGCATTGGCTTaGAGCGTGAAATTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: RLGHQLRAAPEVSTPPPEPKALA*SVKFLS
Trigger: TGACAGAAATTTCACGCTTCAAGCCAATGCTTTAGG...CTCGGGTGGAGGCGTGGAGACTTCTGGCGCAGCCCTGAGCTGGTGGCCTAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp TTAACCCCGCTGTGTCCCAGCACAAGAAGTGGTACTGCATTGCTGACTTTGGGCGCACCGCCATGGAACTaGGCCGGACATTTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: LTPLCPSTRSGTALLTLGAPPWN*AGHLSG
Trigger: TCCGGACAAATGTCCGGCCCAGTTCCATGGCGGTGC...GCCCAAAGTCAGCAATGCAGTACCACTTCTTGTGCTGGGACACAGCGGGGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp GGCCTTAACCCCGCTGTGTCCCAGCACAAGAAGTGGTACTGCATTGCTGACTTTGAAGTGAGAGCTTGGTaGAGGGCCTTGGAACCACCC +
Preference number: 4 (lower is better)
Translates to: GLNPAVSQHKKWYCIADFEVRAW*RALEPP
Trigger: GGGTGGTTCCAAGGCCCTTCACCAAGCTCTCACTTC...AAAGTCAGCAATGCAGTACCACTTCTTGTGCTGGGACACAGCGGGGTTAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp GGGCCTTGGAACCACCCAAAAGGCTCACTCGCGCTGCTTCTCGGGCTAGGATTTGTGGTACTGCATTGCTaGCTTTGGGCAGGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: GPWNHPKGSLALLLGLGFVVLHC*LWAGSL
Trigger: TAAGGAACCTGCCCAAAGTCAGCAATGCAGTACCAC...AAATCCTAGCCCGAGAAGCAGCGCGAGTGAGCCTTTTGGGTGGTTCCAAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp TTAACCCCGCTGTGTCCCAGCACAAGAAGTGGTACTGCATTGCTGACTTTGGGCGTAGTGGCTGGATCTTaGGGCAGCCAAGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LTPLCPSTRSGTALLTLGVVAGS*GSQGRL
Trigger: AAGCCTCCCTTGGCTGCCCCAAGATCCAGCCACTAC...GCCCAAAGTCAGCAATGCAGTACCACTTCTTGTGCTGGGACACAGCGGGGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp CTTGATAAATGGGAGGCGTTATTATTTCCTAGTACAACAGACCCAACGGTGAAGGCGCCTCTCCCGGGGTaGCAGGCGCCTCGCATGGCA +
Preference number: 4 (lower is better)
Translates to: LDKWEALLFPSTTDPTVKAPLPG*QAPRMA
Trigger: TGCCATGCGAGGCGCCTGCCACCCCGGGAGAGGCGC...CTTCACCGTTGGGTCTGTTGTACTAGGAAATAATAACGCCTCCCATTTATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp CCGTATGTCCTCGGGCGCTGGAGGTCTCCCAGCGCTGGCATACATAAGCCCTGGCATTGGCTTGAAGCGTaGAATTTCTGTCATCTCAAT +
Preference number: 4 (lower is better)
Translates to: PYVLGRWRSPSAGIHKPWHWLEA*NFCHLN
Trigger: ATTGAGATGACAGAAATTTCACGCTTCAAGCCAATG...CCAGGGCTTATGTATGCCAGCGCTGGGAGACCTCCAGCGCCCGAGGACATACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp ATTCTCACTCCCGAATCCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTTGTGCTGCCAGCAGTTATaGCCCCGGGATCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ILTPESSASSSSGTGSSLCCQQL*PRDLSL
Trigger: AAGAGAGAGATCCCGGGGGCATAACTGCTGGCAGCA...CAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGGATTCGGGAGTGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CCA 90 bp TCTGTCATCTCAATCATTGGTACGAATGTTGACTTTCATCCCAGGGAGTATCTACCCCCTTGGAGCGCCTaGACGCTCAGCGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SVISIIGTNVDFHPREYLPPWSA*TLSAPC
Trigger: GCAGGGGGCGCTGAGCGTCCAGGCGCTCCAAGGGGG...TAGATACTCCCTGGGATGAAAGTCAACATTCGTACCAATGATTGAGATGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp TCGACTTTTTGTCACACATCACAATCTGATCAAGAAATGGTTCGTTGTTGTTGCTGGGGGTCCGGCAGGTaGCACAGGGCGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: STFCHTSQSDQEMVRCCCWGSGR*HRAAGL
Trigger: CAGCCCAGCCGCCCTGTGTCACCTGCCGGACCCCCA...GCAACAACAACGAACCATTTCTTGATCAGATTGTGATGTGTGACAAAAAGTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR GCA 90 bp AGAGCTGGTTGTTGCCGGTTGTCATATAAAATCGACTTTTTGTCACACATCACACTCTGCCCCGCCACCTaGCCGCCTTCGCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RAGCCRLSYKIDFLSHITLCPAT*PPSLLL
Trigger: GAGGAGGAGCGAAGGCGGGCAGGTGGCGGGGCAGAG...TGTGATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR GCA 90 bp GCTGGTTGTTGCCGGTTGTCATATAAAATCGACTTTTTGTCACACATCACAATCGCCACGGGATCTCTCTaGCCCGCCACCTGCCCGCCT +
Preference number: 4 (lower is better)
Translates to: AGCCRLSYKIDFLSHITIATGSL*PATCPP
Trigger: AGGCGGGCAGGTGGCGGGGCAGAGAGATCCCGTGGC...GATTGTGATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR GCA 90 bp GAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCTTGCAGTTTTTGCTGCCAGCAGTTATaGCCCCGGGATCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ENNWALSVEQCHSRPCSFCCQQL*PRDLSL
Trigger: AAGAGAGAGATCCCGGGGGCATAACTGCTGGCAGCA...AAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp GCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCTCCGAATGGAAACTCTaGTTGCTGTTCTCATCATTA +
Preference number: 4 (lower is better)
Translates to: ASSKAASGTGCGPSSALSSEWKL*LLFSSL
Trigger: TAATGATGAGAACAGCAACCAGAGTTTCCATTCGGA...GCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR TCA 90 bp TCAGATGTAATGGTTTCACTGGGATTCAGAAAGTTGCAGTGGATCAGACCAGCACTGGGCCCTTTCTGTTaGGCAGTGCCACAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SDVMVSLGFRKLQWIRPALGPFC*AVPQQA
Trigger: GGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAG...TGCTGGTCTGATCCACTGCAACTTTCTGAATCCCAGTGAAACCATTACATCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR GCA 90 bp CACAGAGCTGGTTGTTGCCGGTTGTCATATAAAATCGACTTTTTGTCACACATCGGGGTTCGTCGGTGCTaGCAGCAGTTATGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: HRAGCCRLSYKIDFLSHIGVRRC*QQLCPR
Trigger: CCGGGGGCATAACTGCTGGCAGCACCGACGAACCCC...GATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGCTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp GAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCTTGCAGTTTTGTGATCCGTCCACCTTaGCCTCCCAAAATGTTGGGA +
Preference number: 4 (lower is better)
Translates to: ENNWALSVEQCHSRPCSFVIRPP*PPKMLG
Trigger: TCCCAACATTTTGGGAGGCCAAGGTGGACGGATCAC...AAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR TCA 90 bp GGTGAAGGGCCTTGGAACCACCCAAAAGGCTCACTCGCGCTGCTTCTCGGGCTATTCACCAGAGAAAAATaGATGCTCTCCATAAATGGA +
Preference number: 4 (lower is better)
Translates to: GEGPWNHPKGSLALLLGLFTREK*MLSING
Trigger: TCCATTTATGGAGAGCATTCATTTTTCTCTGGTGAA...TAGCCCGAGAAGCAGCGCGAGTGAGCCTTTTGGGTGGTTCCAAGGCCCTTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp TCGACTTTTTGTCACACATCACAATCTGATCAAGAAATGGTTCGTTGTTGTTGCCTCTTGGCCCAGCCGTaGGGGCTGAGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: STFCHTSQSDQEMVRCCCLLAQP*GLSLLR
Trigger: CCTGAGGAGGCTCAGCCCCCACGGCTGGGCCAAGAG...GCAACAACAACGAACCATTTCTTGATCAGATTGTGATGTGTGACAAAAAGTCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp CTTGATAAATGGGAGGCGTTATTATTTCCTAGTACAACAGACCCAACGGTGAAGGGCGGCCTCAGGCACTaGATGTGGTCCGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LDKWEALLFPSTTDPTVKGGLRH*MWSEFC
Trigger: GCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCC...CTTCACCGTTGGGTCTGTTGTACTAGGAAATAATAACGCCTCCCATTTATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp TGGTGCAAGGTTGGCTTTGGGAAGTACTTTAGAGCTGCTTCTCAGTACAGCCACTTCAAGCAGTTCTCTTaGCTCAGCCTCTCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: WCKVGFGKYFRAASQYSHFKQFS*LSLSSS
Trigger: GCTACTCGAGAGGCTGAGGCAAGAGAACTGCTTGAA...GTGGCTGTACTGAGAAGCAGCTCTAAAGTACTTCCCAAAGCCAACCTTGCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp AGATGTAATGGTTTCACTGGGATTCAGAAAGTTGCAGTGGATCAGACCAGCAGCCTGGGGATCCACCACTaGCACCCACTTGAAGATACG +
Preference number: 4 (lower is better)
Translates to: RCNGFTGIQKVAVDQTSSLGIHH*HPLEDT
Trigger: CGTATCTTCAAGTGGGTGCCAGTGGTGGATCCCCAG...GCTGCTGGTCTGATCCACTGCAACTTTCTGAATCCCAGTGAAACCATTACATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp CCCGCTGTGTCCCAGCACAAGAAGTGGTACTGCATTGCTGACTTTGGGCAGGTTCATTCCAGAATTCCATaGGCTGAACCTAAAGCATTG +
Preference number: 4 (lower is better)
Translates to: PAVSQHKKWYCIADFGQVHSRIP*AEPKAL
Trigger: CAATGCTTTAGGTTCAGCCCATGGAATTCTGGAATG...AACCTGCCCAAAGTCAGCAATGCAGTACCACTTCTTGTGCTGGGACACAGCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CCA 90 bp GAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCTTGCAGTTTTTTCAGAAAGTTGCAGTaGATCAGACCAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: ENNWALSVEQCHSRPCSFFRKLQ*IRPAAD
Trigger: GTCTGCTGCTGGTCTGATCCACTGCAACTTTCTGAA...AAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR CAA 72 bp TGGTTGTTGTCATGGAGAATAACTGGGCCCTTTCTGTaGAGCAGTGCCACAGCAGGCCTTGCAGTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: WLLSWRITGPFL*SSATAGLAVFG
Trigger: ACCAAAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTCCATGACAACAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp TGGTGCAAGGTTGGCTTTGGGAAGTACTTTAGAGCTGCTTCTCAGTACAGCCACAGGGAACCTTCCGAATaGAAACTCTGGTTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: WCKVGFGKYFRAASQYSHREPSE*KLWLLF
Trigger: GAACAGCAACCAGAGTTTCCATTCGGAAGGTTCCCT...GTGGCTGTACTGAGAAGCAGCTCTAAAGTACTTCCCAAAGCCAACCTTGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp AGAGCTGGTTGTTGCCGGTTGTCATATAAAATCGACTTTTTGTCACACATCACACTCCTTGGTCAGCATTaGGGGTTCGTCGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RAGCCRLSYKIDFLSHITLLGQH*GFVGAA
Trigger: GGCAGCACCGACGAACCCCCAATGCTGACCAAGGAG...TGTGATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp TCAGATGTAATGGTTTCACTGGGATTCAGAAAGTTGCAGTGGATCAGACCAGCAAGCCTCTCGAGTAGCTaGGATTACAGGCGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SDVMVSLGFRKLQWIRPASLSSS*DYRRQL
Trigger: TAGCTGGCGCCTGTAATCCCAGCTACTCGAGAGGCT...TGCTGGTCTGATCCACTGCAACTTTCTGAATCCCAGTGAAACCATTACATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR GCA 90 bp TCGACTTTTTGTCACACATCACAATCTGATCAAGAAATGGTTCGTTGTTGTTGCTTGGGGGTTCGTCGGTaGTGCCAGCAGTTATGCCCC +
Preference number: 4 (lower is better)
Translates to: STFCHTSQSDQEMVRCCCLGVRR*CQQLCP
Trigger: GGGGCATAACTGCTGGCAGCACCGACGAACCCCCAA...GCAACAACAACGAACCATTTCTTGATCAGATTGTGATGTGTGACAAAAAGTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR GCA 90 bp GAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCTTGCAGTTTTCACAGAGCTGGTTGTTaGCGGTTGTCATATAAAATC +
Preference number: 4 (lower is better)
Translates to: ENNWALSVEQCHSRPCSFHRAGC*RLSYKI
Trigger: GATTTTATATGACAACCGGCAACAACCAGCTCTGTG...AAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp GAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCTTGCAGTTTTTTCATTAGCAGTTCCTaGGCCAAGTGTGTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: ENNWALSVEQCHSRPCSFFISSS*AKCVVD
Trigger: ATCAACAACACACTTGGCCCAGGAACTGCTAATGAA...AAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR TCA 90 bp ATATTTGAAGCGCTGGTTATGCGATGTGTGGTTGTTGTCATGGAGAATAACTGGCCACTGGCACCCACTTaGAGATACGAAGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: IFEALVMRCVVVVMENNWPLAPT*RYEGKC
Trigger: ACACTTCCCTTCGTATCTTCAAGTGGGTGCCAGTGG...CCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR GCA 90 bp TCTGTCATCTCAATCATTGGTACGAATGTTGACTTTCATCCCAGGGAGTATCTATGCTGCCAGCAGTTATaGCCCCGGGATCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SVISIIGTNVDFHPREYLCCQQL*PRDLSL
Trigger: AAGAGAGAGATCCCGGGGGCATAACTGCTGGCAGCA...TAGATACTCCCTGGGATGAAAGTCAACATTCGTACCAATGATTGAGATGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp TCAGATGTAATGGTTTCACTGGGATTCAGAAAGTTGCAGTGGATCAGACCAGCATGCCACAGCAGGCCTTaGAGTTTTTGGTGCATCTCA +
Preference number: 4 (lower is better)
Translates to: SDVMVSLGFRKLQWIRPACHSRP*SFWCIS
Trigger: TGAGATGCACCAAAAACTGCAAGGCCTGCTGTGGCA...TGCTGGTCTGATCCACTGCAACTTTCTGAATCCCAGTGAAACCATTACATCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR TCA 90 bp GAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCTTGCAGTTTTCTTTGCAAAACTTCTTaGACCACCACTGTACTATAT +
Preference number: 4 (lower is better)
Translates to: ENNWALSVEQCHSRPCSFLCKTS*TTTVLY
Trigger: ATATAGTACAGTGGTGGTTCAAGAAGTTTTGCAAAG...AAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR TCA 90 bp AGATGTAATGGTTTCACTGGGATTCAGAAAGTTGCAGTGGATCAGACCAGCAGCGAGGCACCCACTTATTaGGCTTTTTCACCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: RCNGFTGIQKVAVDQTSSEAPTY*AFSPFQ
Trigger: TTGGAAAGGTGAAAAAGCTCAATAAGTGGGTGCCTC...GCTGCTGGTCTGATCCACTGCAACTTTCTGAATCCCAGTGAAACCATTACATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR GCA 90 bp TCGACTTTTTGTCACACATCACAATCTGATCAAGAAATGGTTCGTTGTTGTTGCCAGGACTGGGCTCTGTaGCCTTTTGCAGGGAACCTT +
Preference number: 4 (lower is better)
Translates to: STFCHTSQSDQEMVRCCCQDWAL*PFAGNL
Trigger: AAGGTTCCCTGCAAAAGGGCACAGAGCCCAGTCCTG...GCAACAACAACGAACCATTTCTTGATCAGATTGTGATGTGTGACAAAAAGTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp TCAGATGTAATGGTTTCACTGGGATTCAGAAAGTTGCAGTGGATCAGACCAGCAGTCATGGAGAATAACTaGGCCCTTTCTGTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SDVMVSLGFRKLQWIRPAVMENN*ALSVEQ
Trigger: CTGCTCAACAGAAAGGGCCCAGTTATTCTCCATGAC...TGCTGGTCTGATCCACTGCAACTTTCTGAATCCCAGTGAAACCATTACATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp ATATTTGAAGCGCTGGTTATGCGATGTGTGGTTGTTGTCATGGAGAATAACTGGCAGGTTTCACCATGTTaGCCAGGCTGTTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: IFEALVMRCVVVVMENNWQVSPC*PGCSRT
Trigger: AGTTCGAGAACAGCCTGGCCAACATGGTGAAACCTG...CCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR CAA 72 bp TTCTCAGATGTAATGGTTTCACTGGGATTCAGAAAGTaGCAGTGGATCAGACCAGCAGCAGACCACCAAACA +
Preference number: 4 (lower is better)
Translates to: FSDVMVSLGFRK*QWIRPAADHQT
Trigger: TGTTTGGTGGTCTGCTGCTGGTCTGATCCACTGCAACTTTCTGAATCCCAGTGAAACCATTACATCTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR CAA 72 bp CAATATTTGAAGCGCTGGTTATGCGATGTGTGGTTGTaGTCATGGAGAATAACTGGGCCCTTTCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: QYLKRWLCDVWL*SWRITGPFLLS
Trigger: GCTCAACAGAAAGGGCCCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAAATATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR GCA 90 bp TGGGAGGCGTTATTATTTCCTAGTACAACAGACCCAACGGTGAAGTCAGGAAGTTTACATCAGTCACAATaGCTGGTACAGAGTAAACCC +
Preference number: 4 (lower is better)
Translates to: WEALLFPSTTDPTVKSGSLHQSQ*LVQSKP
Trigger: GGGTTTACTCTGTACCAGGCATTGTGACTGATGTAA...ACTTCCTGACTTCACCGTTGGGTCTGTTGTACTAGGAAATAATAACGCCTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR GCA 90 bp ATATTTGAAGCGCTGGTTATGCGATGTGTGGTTGTTGTCATGGAGAATAACTGGGATGGCCAGACACTATaGTTCTCATCTTCAAGGCTC +
Preference number: 4 (lower is better)
Translates to: IFEALVMRCVVVVMENNWDGQTL*FSSSRL
Trigger: GAGCCTTGAAGATGAGAAGCATAGTGTCTGGCCATC...CCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR CAA 72 bp GCTTCTCAGTACAGCCACAGAGCTGGTTGTTGCCGGTaGTCATATAAAATCGACTTTTTGTCACACATCACA +
Preference number: 4 (lower is better)
Translates to: ASQYSHRAGCCR*SYKIDFLSHIT
Trigger: TGTGATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGCTCTGTGGCTGTACTGAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR CAA 72 bp CAGCAGGCCTTGCAGTTTTTGGTGCATCTCATCGATTaGCTGAGCATACTTCTCAGATGTAATGGTTTCACT +
Preference number: 4 (lower is better)
Translates to: QQALQFLVHLID*LSILLRCNGFT
Trigger: AGTGAAACCATTACATCTGAGAAGTATGCTCAGCAAATCGATGAGATGCACCAAAAACTGCAAGGCCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR GCA 90 bp ATATTTGAAGCGCTGGTTATGCGATGTGTGGTTGTTGTCATGGAGAATAACTGGCCAATTTGCTTCAAATaGCAGACGGCCATAGAATGG +
Preference number: 4 (lower is better)
Translates to: IFEALVMRCVVVVMENNWPICFK*QTAIEW
Trigger: CCATTCTATGGCCGTCTGGCATTTGAAGCAAATTGG...CCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR GCA 90 bp ATATTTGAAGCGCTGGTTATGCGATGTGTGGTTGTTGTCATGGAGAATAACTGGTTGAAGCGCTGGTTATaGGATGTGTGGTTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: IFEALVMRCVVVVMENNWLKRWL*DVWLLS
Trigger: TGACAACAACCACACATCGCATAACCAGCGCTTCAA...CCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp CACAGAGCTGGTTGTTGCCGGTTGTCATATAAAATCGACTTTTTGTCACACATCTCCGAATGGAAACTCTaGTTGCTGTTCTCATCATTA +
Preference number: 4 (lower is better)
Translates to: HRAGCCRLSYKIDFLSHISEWKL*LLFSSL
Trigger: TAATGATGAGAACAGCAACCAGAGTTTCCATTCGGA...GATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGCTCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp GCTGGTTGTTGCCGGTTGTCATATAAAATCGACTTTTTGTCACACATCACAATCCGATGGTTGAGTTCTTaGGCAACTTCTTGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: AGCCRLSYKIDFLSHITIRWLSS*ATSCVV
Trigger: AACTACACAAGAAGTTGCCCAAGAACTCAACCATCG...GATTGTGATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR TCA 90 bp GCTGGTTGTTGCCGGTTGTCATATAAAATCGACTTTTTGTCACACATCACAATCGTCTCCACTGCTTTATaGCCCATTTTTAACTCGAAT +
Preference number: 4 (lower is better)
Translates to: AGCCRLSYKIDFLSHITIVSTAL*PIFNSN
Trigger: ATTCGAGTTAAAAATGGGTCATAAAGCAGTGGAGAC...GATTGTGATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CCA 90 bp GCTGGTTGTTGCCGGTTGTCATATAAAATCGACTTTTTGTCACACATCACAATCTGGTTATGCGATGTGTaGTTGTTGTCATGGAGAATA +
Preference number: 4 (lower is better)
Translates to: AGCCRLSYKIDFLSHITIWLCDV*LLSWRI
Trigger: TATTCTCCATGACAACAACCACACATCGCATAACCA...GATTGTGATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572628.5
3UTR CAA 72 bp TTACATCAGTCACAATGCCTGGTACAGAGTAAACCCTaGATAAATGGGAGGCGTTATTATTTCCTAGTACAA +
Preference number: 4 (lower is better)
Translates to: LHQSQCLVQSKP*INGRRYYFLVQ
Trigger: TTGTACTAGGAAATAATAACGCCTCCCATTTATCAAGGGTTTACTCTGTACCAGGCATTGTGACTGATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp CCGGCGGGTCCCCTGCGCTTGTCCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGCGGGTCCCCTGCGCTaGTCCCCGCCACGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PAGPLRLSPPRPLPAVDPAGPLR*SPPRPL
Trigger: CAAGGGCCGTGGCGGGGACAAGCGCAGGGGACCCGC...CGGGTCCACAGCGGGCAAGGGCCGTGGCGGGGACAAGCGCAGGGGACCCGCCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp CTCAGTGCCGGCAGGACTCGGGACTCGGCGCCTCTCCCGGGGTGGCAGGCGCCTCCCGGGATCTCTCTCTaGGCCCAGCCGTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LSAGRTRDSAPLPGWQAPPGISL*AQPWGL
Trigger: CAGCCCCCACGGCTGGGCCAAGAGAGAGATCCCGGG...AGGCGCCTGCCACCCCGGGAGAGGCGCCGAGTCCCGAGTCCTGCCGGCACTGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp GAACTGGGCCGGACATTTGTCCGGAGGCCCCTCCTGGGCAGGAGCCTCCTGAGGGGTGCCCTCGGGGCCTaGCTGCCTCCCCCGGGAGCT +
Preference number: 5 (lower is better)
Translates to: ELGRTFVRRPLLGRSLLRGALGA*LPPPGA
Trigger: AGCTCCCGGGGGAGGCAGCAAGGCCCCGAGGGCACC...CCTCAGGAGGCTCCTGCCCAGGAGGGGCCTCCGGACAAATGTCCGGCCCAGTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CAA 90 bp AGCCCAGTGCACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATGGTGCCCTCGGGGCCTaGCTGCCTCCCCCGGGAGCT +
Preference number: 5 (lower is better)
Translates to: SPVHPSPRPLARRPQALDGALGA*LPPPGA
Trigger: AGCTCCCGGGGGAGGCAGCAAGGCCCCGAGGGCACC...ATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTGCACTGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CAA 90 bp GGGCAGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAAACTGGGCCGGACATTaGTCCGGAGGCCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GQVWGRSPSDVTAVGELGNWAGH*SGGPSW
Trigger: CCAGGAGGGGCCTCCGGACAAATGTCCGGCCCAGTT...TCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CAA 90 bp GGGCAGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGACCTTACCCTGGGGGATaGTTCTGGGTGCCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: GQVWGRSPSDVTAVGELGPYPGG*FWVPSG
Trigger: CCCCGAGGGCACCCAGAACAATCCCCCAGGGTAAGG...TCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CAA 90 bp GGGCAGGTGTGGGGCCGCTCGCCCTCCGATGTTACCGCGGTGGGTGAGCTGGGAGGGGTCTTGGCTTGCTaGGGGAGCCCACTCACCTCC +
Preference number: 5 (lower is better)
Translates to: GQVWGRSPSDVTAVGELGGVLAC*GSPLTS
Trigger: GGAGGTGAGTGGGCTCCCCAAGCAAGCCAAGACCCC...TCCCAGCTCACCCACCGCGGTAACATCGGAGGGCGAGCGGCCCCACACCTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CAA 90 bp GTGCACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCCCCGGGATCTCTCTCTaGGCCCAGCCGTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: VHPSPRPLARRPQALDVVPGISL*AQPWGL
Trigger: CAGCCCCCACGGCTGGGCCAAGAGAGAGATCCCGGG...GACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CAA 90 bp CCCCGCCACGGCCCTTGCCCGCTGTGGACCCGGAGGCTCAGTGCCGGCAGGACTTTTAGGGGTCTTGGCTaGCTTGGGGAGCCCACTCAC +
Preference number: 5 (lower is better)
Translates to: PRHGPCPLWTRRLSAGRTFRGLG*LGEPTH
Trigger: GTGAGTGGGCTCCCCAAGCAAGCCAAGACCCCTAAA...AGTCCTGCCGGCACTGAGCCTCCGGGTCCACAGCGGGCAAGGGCCGTGGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp GTGCACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCCCTTACCCTGGGGGATaGTTCTGGGTGCCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: VHPSPRPLARRPQALDVVPYPGG*FWVPSG
Trigger: CCCCGAGGGCACCCAGAACAATCCCCCAGGGTAAGG...GACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CAA 90 bp GCGGGGCGGCTTCTGCGCTGGGGTCTCTGCGCGTGCACGGGCCTCAACATATGCGGGCTCTGTGCCCTTTaGCAGGGAACCTTCCGAATG +
Preference number: 5 (lower is better)
Translates to: AGRLLRWGLCACTGLNICGLCAL*QGTFRM
Trigger: CATTCGGAAGGTTCCCTGCAAAAGGGCACAGAGCCC...GCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGCGCAGAAGCCGCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp GCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCAACTGGGCCGGACATTaGTCCGGAGGCCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ASSKAASGTGCGPSSALSNWAGH*SGGPSW
Trigger: CCAGGAGGGGCCTCCGGACAAATGTCCGGCCCAGTT...GCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CAA 90 bp TCTGCCCTAAGCCCTTCCCATGCATTCGGGCGCCAGTGGCGAGCCAGATGGGTGGGGCTCTGTGCCCTTTaGCAGGGAACCTCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SALSPSHAFGRQWRARWVGLCAL*QGTSSW
Trigger: CCAGGAGGAGGTTCCCTGCAAAAGGGCACAGAGCCC...CACCCATCTGGCTCGCCACTGGCGCCCGAATGCATGGGAAGGGCTTAGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS GCA 90 bp CTGGAACAGGCTCCTCCTTGGTCAGCATTGGGGGTTCGTCGGTGCTaGCAGCAGTTATGCCCCCGGGATCTCTCTCTTGGCCCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: LEQAPPWSALGVRRC*QQLCPRDLSLGPAV
Trigger: CACGGCTGGGCCAAGAGAGAGATCCCGGGGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000572628.5
ENST00000574418.5
CDS CCA 90 bp CGAGTCCTCTGTGTCACCCTGGGCTGCCTCAGGGACAGGTGGCACTaGCTCAAAGACAGGGTAAGCTTCGGGGGCCTCAGCTTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: RVLCVTLGCLRDRWH*LKDRVSFGGLSFQQ
Trigger: CTGCTGGAAGCTGAGGCCCCCGAAGCTTACCCTGTCTTTGAGCCAGTGCCACCTGTCCCTGAGGCAGCCCAGGGTGACACAGAGGACTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215115.5
CDS CCA 90 bp ACCCTCCGAGTCCTCTGTGTCACCCTGGGCTGCCTCAGGGACAGGTaGCACTGGCTCAAAGACAGGGTAAGCTTCGGGGGCCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TLRVLCVTLGCLRDR*HWLKDRVSFGGLSF
Trigger: GAAGCTGAGGCCCCCGAAGCTTACCCTGTCTTTGAGCCAGTGCCACCTGTCCCTGAGGCAGCCCAGGGTGACACAGAGGACTCGGAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215115.5
CDS-3UTR CAA 90 bp AGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCCCTTCCCATGCATTCGGGCGGGGGTCTTGGCTTGCTaGGGGAGCCCACTCACCTCC +
Preference number: 5 (lower is better)
Translates to: RHWMWSEFCPKPFPCIRAGVLAC*GSPLTS
Trigger: GGAGGTGAGTGGGCTCCCCAAGCAAGCCAAGACCCC...CGCCCGAATGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS GCA 90 bp GTTCTGGAACAGGCTCCTCCTTGGTCAGCATTGGGGGTTCGTCGGTaGTGCCAGCAGTTATGCCCCCGGGATCTCTCTCTTGGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: VLEQAPPWSALGVRR*CQQLCPRDLSLGPA
Trigger: GGCTGGGCCAAGAGAGAGATCCCGGGGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000572628.5
ENST00000574418.5
CDS CCA 90 bp CTTCGGGGGCCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTTaGTCAGCATTGGGGGTTCGTCGGTGCTGCCAGCAGTTATGCCCC +
Preference number: 5 (lower is better)
Translates to: LRGPQLPAVLEQAPP*SALGVRRCCQQLCP
Trigger: GGGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGGCCCCCGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215115.5
CDS-3UTR CAA 90 bp TCTTTCCGCCCTCGGGGCACAGGTAGTGGCTGGATCTTGGGGCAGCCAAGGGAGTTTAGGGGTCTTGGCTaGCTTGGGGAGCCCACTCAC +
Preference number: 5 (lower is better)
Translates to: SFRPRGTGSGWILGQPREFRGLG*LGEPTH
Trigger: GTGAGTGGGCTCCCCAAGCAAGCCAAGACCCCTAAA...CTCCCTTGGCTGCCCCAAGATCCAGCCACTACCTGTGCCCCGAGGGCGGAAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CAA 90 bp GGTGAAGGGCCTTGGAACCACCCAAAAGGCTCACTCGCGCTGCTTCTCGGGCTAGGGCTGAAAGGCCGCTaGTCCACATGGGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: GEGPWNHPKGSLALLLGLGLKGR*STWVPR
Trigger: CCTGGGAACCCATGTGGACAAGCGGCCTTTCAGCCC...TAGCCCGAGAAGCAGCGCGAGTGAGCCTTTTGGGTGGTTCCAAGGCCCTTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp AGCCCAGTGCACCCCTCCCCTAGGCCTCTAGCAAGGCGGCCTCAGGCACTGGATTCAGGAAGTGAGAGCTaGGTGAAGGGCCTTGGAACC +
Preference number: 5 (lower is better)
Translates to: SPVHPSPRPLARRPQALDSGSES*VKGLGT
Trigger: GGTTCCAAGGCCCTTCACCAAGCTCTCACTTCCTGA...ATCCAGTGCCTGAGGCCGCCTTGCTAGAGGCCTAGGGGAGGGGTGCACTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp TCTGGAACAGGCTCCTCCTTGGTCAGCATTGGGGGTTCGTCGGTGCTGCCAGCAGGAACAGGCTCCTCCTaGGTCAGCATTGGGGGTTCG +
Preference number: 5 (lower is better)
Translates to: SGTGSSLVSIGGSSVLPAGTGSS*VSIGGS
Trigger: CGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCC...TGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CAA 90 bp TCTGGAACAGGCTCCTCCTTGGTCAGCATTGGGGGTTCGTCGGTGCTGCCAGCAGAGGCTTTAGGGGTCTaGGCTTGCTTGGGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: SGTGSSLVSIGGSSVLPAEALGV*ACLGSP
Trigger: TGGGCTCCCCAAGCAAGCCAAGACCCCTAAAGCCTC...TGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CAA 90 bp GAGGGGCTCTGTCTTCAGCCCCTTCTCGTGAAGGGCTCTCCTCGTCATTCTCACGGTAGTGGCTGGATCTaGGGGCAGCCAAGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: EGLCLQPLLVKGSPRHSHGSGWI*GQPREA
Trigger: AGCCTCCCTTGGCTGCCCCAAGATCCAGCCACTACC...GTGAGAATGACGAGGAGAGCCCTTCACGAGAAGGGGCTGAAGACAGAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS CCA 90 bp CTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTTGGTCAGCATTaGGGGTTCGTCGGTGCTGCCAGCAGTTATGCCCCCGGGATCTCT +
Preference number: 5 (lower is better)
Translates to: LSFQQFWNRLLLGQH*GFVGAASSYAPGIS
Trigger: AGAGATCCCGGGGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000572628.5
ENST00000574418.5
CDS CCA 90 bp CTCCCGAATCCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTTaGTCAGCATTGGGGGTTCGTCGGTGCTGCCAGCAGTTATGCCCC +
Preference number: 5 (lower is better)
Translates to: LPNPQLPAVLEQAPP*SALGVRRCCQQLCP
Trigger: GGGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGGATTCGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS-3UTR CAA 90 bp CCCCTTCTCGTGAAGGGCTCTCCTCGTCATTCTCACTCCCGAATCCTCAGCTTCCCTCCTTGGTCAGCATaGGGGGTTCGTCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: PLLVKGSPRHSHSRILSFPPWSA*GVRRCC
Trigger: GCAGCACCGACGAACCCCCAATGCTGACCAAGGAGG...GAAGCTGAGGATTCGGGAGTGAGAATGACGAGGAGAGCCCTTCACGAGAAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CAA 90 bp GAGCTTGGTGAAGGGCCTTGGAACCACCCAAAAGGCTCACTCGCGCTGCTTCTCGGAACAGGCTCCTCCTaGGTCAGCATTGGGGGTTCG +
Preference number: 5 (lower is better)
Translates to: ELGEGPWNHPKGSLALLLGTGSS*VSIGGS
Trigger: CGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCC...GAGAAGCAGCGCGAGTGAGCCTTTTGGGTGGTTCCAAGGCCCTTCACCAAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp CCCGCTGTGTCCCAGCACAAGAAGTGGTACTGCATTGCTGACTTTGGGCAGGTTCCTCCTTGGTCAGCATaGGGGGTTCGTCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: PAVSQHKKWYCIADFGQVPPWSA*GVRRCC
Trigger: GCAGCACCGACGAACCCCCAATGCTGACCAAGGAGG...AACCTGCCCAAAGTCAGCAATGCAGTACCACTTCTTGTGCTGGGACACAGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp GCCTCTAGCAAGGCGGCCTCAGGCACTGGATGTGGTCCGAGTTCTGCCCTAAGCACTGCATTGCTGACTTaGGGCAGGTTCCTTAACCTC +
Preference number: 5 (lower is better)
Translates to: ASSKAASGTGCGPSSALSTALLT*GRFLNL
Trigger: GAGGTTAAGGAACCTGCCCAAAGTCAGCAATGCAGT...GCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGGCCGCCTTGCTAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS CCA 90 bp AGGGCTCTCCTCGTCATTCTCACTCCCGAATCGGTTCAGCATGGCTaGAGAGGTCCCAGGAAACTTACAGTCATGGCGGAAGGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: RALLVILTPESVQHG*RGPRKLTVMAEGEA
Trigger: TGCTTCCCCTTCCGCCATGACTGTAAGTTTCCTGGGACCTCTCCAGCCATGCTGAACCGATTCGGGAGTGAGAATGACGAGGAGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576194.1
CDS CCA 90 bp GTGAAGGGCTCTCCTCGTCATTCTCACTCCCGAATCGGTTCAGCATaGCTGGAGAGGTCCCAGGAAACTTACAGTCATGGCGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: VKGSPRHSHSRIGSA*LERSQETYSHGGRG
Trigger: TCCCCTTCCGCCATGACTGTAAGTTTCCTGGGACCTCTCCAGCCATGCTGAACCGATTCGGGAGTGAGAATGACGAGGAGAGCCCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576194.1
CDS-3UTR CAA 90 bp GAGGGGCTCTGTCTTCAGCCCCTTCTCGTGAAGGGCTCTCCTCGTCATTCTCACACCACTGGCACCCACTaGAAGATACGAAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: EGLCLQPLLVKGSPRHSHTTGTH*KIRREV
Trigger: CACTTCCCTTCGTATCTTCAAGTGGGTGCCAGTGGT...GTGAGAATGACGAGGAGAGCCCTTCACGAGAAGGGGCTGAAGACAGAGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574418.5
CDS-3UTR CAA 90 bp CCGTATGTCCTCGGGCGCTGGAGGTCTCCCAGCGCTGGCATACATAAGCCCTGGTCATTGGTACGAATGTaGACTTTCATCCCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: PYVLGRWRSPSAGIHKPWSLVRM*TFIPGS
Trigger: ACTCCCTGGGATGAAAGTCAACATTCGTACCAATGA...CCAGGGCTTATGTATGCCAGCGCTGGGAGACCTCCAGCGCCCGAGGACATACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp GAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCTTGCAGTTTTGGAACAGGCTCCTCCTaGGTCAGCATTGGGGGTTCG +
Preference number: 5 (lower is better)
Translates to: ENNWALSVEQCHSRPCSFGTGSS*VSIGGS
Trigger: CGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCC...AAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp TGGAATGGAGCTTCCTTCACCAACATCACCCTGGTGACGACTGAGAAAAGGTCAGGTAGTGGCTGGATCTaGGGGCAGCCAAGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: WNGASFTNITLVTTEKRSGSGWI*GQPREA
Trigger: AGCCTCCCTTGGCTGCCCCAAGATCCAGCCACTACC...TGACCTTTTCTCAGTCGTCACCAGGGTGATGTTGGTGAAGGAAGCTCCATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp GCTGGGGTCTCTGCGCGTGCACGGGCCTCAACATATGCATGGACGTCCAGGTGCGTACAGAGTAAACCCTaGATAAATGGGAGGCGTTAT +
Preference number: 5 (lower is better)
Translates to: AGVSARARASTYAWTSRCVQSKP*INGRRY
Trigger: ATAACGCCTCCCATTTATCAAGGGTTTACTCTGTAC...GCACCTGGACGTCCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp CCCGCTGTGTCCCAGCACAAGAAGTGGTACTGCATTGCTGACTTTGGGCAGGTTACCACTGGCACCCACTaGAAGATACGAAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: PAVSQHKKWYCIADFGQVTTGTH*KIRREV
Trigger: CACTTCCCTTCGTATCTTCAAGTGGGTGCCAGTGGT...AACCTGCCCAAAGTCAGCAATGCAGTACCACTTCTTGTGCTGGGACACAGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp TGGGAGGCGTTATTATTTCCTAGTACAACAGACCCAACGGTGAAGTCAGGAAGTCCCTGGTGGAACCACTaGCCGTATGTCCTCGGGCGC +
Preference number: 5 (lower is better)
Translates to: WEALLFPSTTDPTVKSGSPWWNH*PYVLGR
Trigger: GCGCCCGAGGACATACGGCAAGTGGTTCCACCAGGG...ACTTCCTGACTTCACCGTTGGGTCTGTTGTACTAGGAAATAATAACGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp GCTGGGGTCTCTGCGCGTGCACGGGCCTCAACATATGCATGGACGTCCAGGTGCCTGTCATCTCAATCATaGGTACGAATGTTGACTTTC +
Preference number: 5 (lower is better)
Translates to: AGVSARARASTYAWTSRCLSSQS*VRMLTF
Trigger: GAAAGTCAACATTCGTACCAATGATTGAGATGACAG...GCACCTGGACGTCCATGCATATGTTGAGGCCCGTGCACGCGCAGAGACCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp GAAGCGCTGGTTATGCGATGTGTGGTTGTTGTCATGGAGAATAACTGGGCCCTTACTGGGCCCTTTCTGTaGAGCAGTGCCACAGCAGGC +
Preference number: 5 (lower is better)
Translates to: EALVMRCVVVVMENNWALTGPFL*SSATAG
Trigger: GCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGT...AAGGGCCCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS CCA 90 bp CCCCCAGGACTGGGCTCTGTGCCCTTTTGCAGGGAACCTTCCGAATaGAAACTCTGGTTGCTGTTCTCATCATTAAGATCCAGCAGGATG +
Preference number: 5 (lower is better)
Translates to: PPGLGSVPFCREPSE*KLWLLFSSLRSSRM
Trigger: CATCCTGCTGGATCTTAATGATGAGAACAGCAACCAGAGTTTCCATTCGGAAGGTTCCCTGCAAAAGGGCACAGAGCCCAGTCCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000572628.5
CDS-3UTR CAA 90 bp AGAGCTGGTTGTTGCCGGTTGTCATATAAAATCGACTTTTTGTCACACATCACACCCGGGATCTCTCTCTaGGCCCAGCCGTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: RAGCCRLSYKIDFLSHITPGISL*AQPWGL
Trigger: CAGCCCCCACGGCTGGGCCAAGAGAGAGATCCCGGG...TGTGATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp GAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCTTGCAGTTTTAGTGATCCGTCCACCTaGGCCTCCCAAAATGTTGGG +
Preference number: 5 (lower is better)
Translates to: ENNWALSVEQCHSRPCSFSDPST*ASQNVG
Trigger: CCCAACATTTTGGGAGGCCAAGGTGGACGGATCACT...AAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp ATATTTGAAGCGCTGGTTATGCGATGTGTGGTTGTTGTCATGGAGAATAACTGGCCTCCTTGGTCAGCATaGGGGGTTCGTCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: IFEALVMRCVVVVMENNWPPWSA*GVRRCC
Trigger: GCAGCACCGACGAACCCCCAATGCTGACCAAGGAGG...CCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp GAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCTTGCAGTTTTCTGGGATTCAGAAAGTaGCAGTGGATCAGACCAGCA +
Preference number: 5 (lower is better)
Translates to: ENNWALSVEQCHSRPCSFLGFRK*QWIRPA
Trigger: TGCTGGTCTGATCCACTGCAACTTTCTGAATCCCAG...AAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp GAAGCGCTGGTTATGCGATGTGTGGTTGTTGTCATGGAGAATAACTGGGCCCTTACAGGTTTCACCATGTaGGCCAGGCTGTTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: EALVMRCVVVVMENNWALTGFTM*ARLFSN
Trigger: GTTCGAGAACAGCCTGGCCAACATGGTGAAACCTGT...AAGGGCCCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp CTTGATAAATGGGAGGCGTTATTATTTCCTAGTACAACAGACCCAACGGTGAAGGAGGCTTTAGGGGTCTaGGCTTGCTTGGGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: LDKWEALLFPSTTDPTVKEALGV*ACLGSP
Trigger: TGGGCTCCCCAAGCAAGCCAAGACCCCTAAAGCCTC...CTTCACCGTTGGGTCTGTTGTACTAGGAAATAATAACGCCTCCCATTTATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380317.8
CDS-3UTR CAA 90 bp GAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCTTGCAGTTTTAATGAGAGCTTTCAGTaGGTCATTGTCAACTTCCGA +
Preference number: 5 (lower is better)
Translates to: ENNWALSVEQCHSRPCSFNESFQ*VIVNFR
Trigger: TCGGAAGTTGACAATGACCAACTGAAAGCTCTCATT...AAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp GAAGCGCTGGTTATGCGATGTGTGGTTGTTGTCATGGAGAATAACTGGGCCCTTTTTCACCTTTCCAATTaGCTTCAAATGCCAGACGGC +
Preference number: 5 (lower is better)
Translates to: EALVMRCVVVVMENNWALFHLSN*LQMPDG
Trigger: GCCGTCTGGCATTTGAAGCAAATTGGAAAGGTGAAA...AAGGGCCCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS GCA 90 bp GGCACCCACTTATTGAGCTTTTTCACCTTTCCAATTTGCTTCAAATaGCAGACGGCCATAGAATGGTCGATGGTTGAGTTCTTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: GTHLLSFFTFPICFK*QTAIEWSMVEFLGN
Trigger: GTTGCCCAAGAACTCAACCATCGACCATTCTATGGCCGTCTGGCATTTGAAGCAAATTGGAAAGGTGAAAAAGCTCAATAAGTGGGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp ATATTTGAAGCGCTGGTTATGCGATGTGTGGTTGTTGTCATGGAGAATAACTGGACCACTGGCACCCACTaGAAGATACGAAGGGAAGTG +
Preference number: 5 (lower is better)
Translates to: IFEALVMRCVVVVMENNWTTGTH*KIRREV
Trigger: CACTTCCCTTCGTATCTTCAAGTGGGTGCCAGTGGT...CCAGTTATTCTCCATGACAACAACCACACATCGCATAACCAGCGCTTCAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp TCGACTTTTTGTCACACATCACAATCTGATCAAGAAATGGTTCGTTGTTGTTGCGGGCTCTGTGCCCTTTaGCAGGGAACCTTCCGAATG +
Preference number: 5 (lower is better)
Translates to: STFCHTSQSDQEMVRCCCGLCAL*QGTFRM
Trigger: CATTCGGAAGGTTCCCTGCAAAAGGGCACAGAGCCC...GCAACAACAACGAACCATTTCTTGATCAGATTGTGATGTGTGACAAAAAGTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp GAGAATAACTGGGCCCTTTCTGTTGAGCAGTGCCACAGCAGGCCTTGCAGTTTTTTATGCGATGTGTGGTaGTTGTCATGGAGAATAACT +
Preference number: 5 (lower is better)
Translates to: ENNWALSVEQCHSRPCSFLCDVW*LSWRIT
Trigger: AGTTATTCTCCATGACAACAACCACACATCGCATAA...AAAACTGCAAGGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS GCA 90 bp AGAGCTTTCAGTTGGTCATTGTCAACTTCCGATGGCCAGACACTATaGTTCTCATCTTCAAGGCTCTTGTCTTCTTTGCAAAACTTCTTG +
Preference number: 5 (lower is better)
Translates to: RAFSWSLSTSDGQTL*FSSSRLLSSLQNFL
Trigger: CAAGAAGTTTTGCAAAGAAGACAAGAGCCTTGAAGATGAGAAGCATAGTGTCTGGCCATCGGAAGTTGACAATGACCAACTGAAAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS CCA 90 bp ATCAGCTTCAATGAGAGCTTTCAGTTGGTCATTGTCAACTTCCGATaGCCAGACACTATGCTTCTCATCTTCAAGGCTCTTGTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: ISFNESFQLVIVNFR*PDTMLLIFKALVFF
Trigger: AAAGAAGACAAGAGCCTTGAAGATGAGAAGCATAGTGTCTGGCCATCGGAAGTTGACAATGACCAACTGAAAGCTCTCATTGAAGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp TCGACTTTTTGTCACACATCACAATCTGATCAAGAAATGGTTCGTTGTTGTTGCTGCGATGTGTGGTTGTaGTCATGGAGAATAACTGGG +
Preference number: 5 (lower is better)
Translates to: STFCHTSQSDQEMVRCCCCDVWL*SWRITG
Trigger: CCCAGTTATTCTCCATGACAACAACCACACATCGCA...GCAACAACAACGAACCATTTCTTGATCAGATTGTGATGTGTGACAAAAAGTCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS CCA 90 bp TTTTTCACCTTTCCAATTTGCTTCAAATGCCAGACGGCCATAGAATaGTCGATGGTTGAGTTCTTGGGCAACTTCTTGTGTAGTTTTAAC +
Preference number: 5 (lower is better)
Translates to: FFTFPICFKCQTAIE*SMVEFLGNFLCSFN
Trigger: GTTAAAACTACACAAGAAGTTGCCCAAGAACTCAACCATCGACCATTCTATGGCCGTCTGGCATTTGAAGCAAATTGGAAAGGTGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp CACAGAGCTGGTTGTTGCCGGTTGTCATATAAAATCGACTTTTTGTCACACATCTCATCTTCAAGGCTCTaGTCTTCTTTGCAAAACTTC +
Preference number: 5 (lower is better)
Translates to: HRAGCCRLSYKIDFLSHISSSRL*SSLQNF
Trigger: GAAGTTTTGCAAAGAAGACAAGAGCCTTGAAGATGA...GATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGCTCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp CACAGAGCTGGTTGTTGCCGGTTGTCATATAAAATCGACTTTTTGTCACACATCTTCTTGGGCAACTTCTaGTGTAGTTTTAACAGGATC +
Preference number: 5 (lower is better)
Translates to: HRAGCCRLSYKIDFLSHIFLGNF*CSFNRI
Trigger: GATCCTGTTAAAACTACACAAGAAGTTGCCCAAGAA...GATGTGTGACAAAAAGTCGATTTTATATGACAACCGGCAACAACCAGCTCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS-3UTR CAA 90 bp GCATACTTCTCAGATGTAATGGTTTCACTGGGATTCAGAAAGTTGCAGTGGATCTCTTTGCAAAACTTCTaGAACCACCACTGTACTATA +
Preference number: 5 (lower is better)
Translates to: AYFSDVMVSLGFRKLQWISLQNF*NHHCTI
Trigger: TATAGTACAGTGGTGGTTCAAGAAGTTTTGCAAAGA...GATCCACTGCAACTTTCTGAATCCCAGTGAAACCATTACATCTGAGAAGTATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS GCA 72 bp ACGTTCCCGGCCACGGGATCTCTCTGCCCCGCCACCTaGCCGCCTTCGCTCCTCCTCCTGGGGATCCACCAC +
Preference number: 6 (lower is better)
Translates to: TFPATGSLCPAT*PPSLLLLGIHH
Trigger: GTGGTGGATCCCCAGGAGGAGGAGCGAAGGCGGGCAGGTGGCGGGGCAGAGAGATCCCGTGGCCGGGAACGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000572628.5
CDS GCA 72 bp GGGGGCACCCTCCGAGTCCTCTGTGTCACCCTGGGCTaGCTCAGGGACAGGTGGCACTGGCTCAAAGACAGG +
Preference number: 6 (lower is better)
Translates to: GGTLRVLCVTLG*LRDRWHWLKDR
Trigger: CCTGTCTTTGAGCCAGTGCCACCTGTCCCTGAGGCAGCCCAGGGTGACACAGAGGACTCGGAGGGTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215115.5
CDS GCA 72 bp TCAGCATTGGGGGTTCGTCGGTGCTGCCAGCAGTTATaGCCCCGGGATCTCTCTCTTGGCCCAGCCGTGGGG +
Preference number: 6 (lower is better)
Translates to: SALGVRRCCQQL*PRDLSLGPAVG
Trigger: CCCCACGGCTGGGCCAAGAGAGAGATCCCGGGGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000572628.5
ENST00000574418.5
CDS CAA 90 bp GCTTCGGGGGCCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTaGGTCAGCATTGGGGGTTCGTCGGTGCTGCCAGCAGTTATGCCC +
Preference number: 6 (lower is better)
Translates to: ASGASASSSSGTGSS*VSIGGSSVLPAVMP
Trigger: GGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGGCCCCCGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215115.5
CDS GCA 72 bp GCTCCTCCTTGGTCAGCATTGGGGGTTCGTCGGTGCTaGCAGCAGTTATGCCCCCGGGATCTCTCTCTTGGC +
Preference number: 6 (lower is better)
Translates to: APPWSALGVRRC*QQLCPRDLSLG
Trigger: GCCAAGAGAGAGATCCCGGGGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000572628.5
ENST00000574418.5
CDS CCA 72 bp TGCCCGCCTTCGCTCCTCCTCCTGGGGATCCACCACTaGCACCCACTTGAAGATACGAAGGGAAGTGTCGCC +
Preference number: 6 (lower is better)
Translates to: CPPSLLLLGIHH*HPLEDTKGSVA
Trigger: GGCGACACTTCCCTTCGTATCTTCAAGTGGGTGCCAGTGGTGGATCCCCAGGAGGAGGAGCGAAGGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000572628.5
CDS CAA 90 bp CCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTTGGTCAGCATaGGGGGTTCGTCGGTGCTGCCAGCAGTTATGCCCCCGGGATCTC +
Preference number: 6 (lower is better)
Translates to: PQLPAVLEQAPPWSA*GVRRCCQQLCPRDL
Trigger: GAGATCCCGGGGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000574418.5
CDS GCA 72 bp CAGGCTCCTCCTTGGTCAGCATTGGGGGTTCGTCGGTaGTGCCAGCAGTTATGCCCCCGGGATCTCTCTCTT +
Preference number: 6 (lower is better)
Translates to: QAPPWSALGVRR*CQQLCPRDLSL
Trigger: AAGAGAGAGATCCCGGGGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000572628.5
ENST00000574418.5
CDS CCA 72 bp CAGCAGTTCTGGAACAGGCTCCTCCTTGGTCAGCATTaGGGGTTCGTCGGTGCTGCCAGCAGTTATGCCCCC +
Preference number: 6 (lower is better)
Translates to: QQFWNRLLLGQH*GFVGAASSYAP
Trigger: GGGGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000572628.5
ENST00000574418.5
CDS CAA 72 bp CCAGCAGTTCTGGAACAGGCTCCTCCTTGGTCAGCATaGGGGGTTCGTCGGTGCTGCCAGCAGTTATGCCCC +
Preference number: 6 (lower is better)
Translates to: PAVLEQAPPWSA*GVRRCCQQLCP
Trigger: GGGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000572628.5
ENST00000574418.5
CDS CAA 72 bp GCCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTaGGTCAGCATTGGGGGTTCGTCGGTGCTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: ASASSSSGTGSS*VSIGGSSVLPA
Trigger: TGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215115.5
CDS CAA 90 bp TCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTTGGTCAGCATaGGGGGTTCGTCGGTGCTGCCAGCAGTTATGCCCCCGGGATCTC +
Preference number: 6 (lower is better)
Translates to: SQLPAVLEQAPPWSA*GVRRCCQQLCPRDL
Trigger: GAGATCCCGGGGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS TCA 72 bp AGCCTCCTGAGGGGCTCTGTCTTCAGCCCCTTCTCGTaGAGGGCTCTCCTCGTCATTCTCACTCCCGAATCG +
Preference number: 6 (lower is better)
Translates to: SLLRGSVFSPFS*RALLVILTPES
Trigger: CGATTCGGGAGTGAGAATGACGAGGAGAGCCCTTCACGAGAAGGGGCTGAAGACAGAGCCCCTCAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576194.1
CDS CAA 72 bp GTCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTaGGTCAGCATTGGGGGTTCGTCGGTGCTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: VSASSSSGTGSS*VSIGGSSVLPA
Trigger: TGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS CAA 90 bp ACTCCCGAATCCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTaGGTCAGCATTGGGGGTTCGTCGGTGCTGCCAGCAGTTATGCCC +
Preference number: 6 (lower is better)
Translates to: TPESSASSSSGTGSS*VSIGGSSVLPAVMP
Trigger: GGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGGATTCGGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380317.8
ENST00000574418.5
CDS CAA 90 bp ATTTCCATAGTCTCAGCTTCCAGCAGTTCTGGAACAGGCTCCTCCTaGGTCAGCATTGGGGGTTCGTCGGTGCTGCCAGCAGTTATGCCC +
Preference number: 6 (lower is better)
Translates to: ISIVSASSSSGTGSS*VSIGGSSVLPAVMP
Trigger: GGGCATAACTGCTGGCAGCACCGACGAACCCCCAATGCTGACCAAGGAGGAGCCTGTTCCAGAACTGCTGGAAGCTGAGACTATGGAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS CCA 72 bp CTCGTCATTCTCACTCCCGAATCGGTTCAGCATGGCTaGAGAGGTCCCAGGAAACTTACAGTCATGGCGGAA +
Preference number: 6 (lower is better)
Translates to: LVILTPESVQHG*RGPRKLTVMAE
Trigger: TTCCGCCATGACTGTAAGTTTCCTGGGACCTCTCCAGCCATGCTGAACCGATTCGGGAGTGAGAATGACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576194.1
CDS CCA 72 bp TCTCCTCGTCATTCTCACTCCCGAATCGGTTCAGCATaGCTGGAGAGGTCCCAGGAAACTTACAGTCATGGC +
Preference number: 6 (lower is better)
Translates to: SPRHSHSRIGSA*LERSQETYSHG
Trigger: GCCATGACTGTAAGTTTCCTGGGACCTCTCCAGCCATGCTGAACCGATTCGGGAGTGAGAATGACGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576194.1
CDS CCA 72 bp CTGGGCTCTGTGCCCTTTTGCAGGGAACCTTCCGAATaGAAACTCTGGTTGCTGTTCTCATCATTAAGATCC +
Preference number: 6 (lower is better)
Translates to: LGSVPFCREPSE*KLWLLFSSLRS
Trigger: GGATCTTAATGATGAGAACAGCAACCAGAGTTTCCATTCGGAAGGTTCCCTGCAAAAGGGCACAGAGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000215115.5
ENST00000380317.8
ENST00000572628.5
CDS CAA 72 bp TGCCAGACGGCCATAGAATGGTCGATGGTTGAGTTCTaGGGCAACTTCTTGTGTAGTTTTAACAGGATCAGC +
Preference number: 6 (lower is better)
Translates to: CQTAIEWSMVEF*GNFLCSFNRIS
Trigger: GCTGATCCTGTTAAAACTACACAAGAAGTTGCCCAAGAACTCAACCATCGACCATTCTATGGCCGTCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS GCA 72 bp GGCACCCACTTATTGAGCTTTTTCACCTTTCCAATTTaGTTCAAATGCCAGACGGCCATAGAATGGTCGATG +
Preference number: 6 (lower is better)
Translates to: GTHLLSFFTFPI*FKCQTAIEWSM
Trigger: CATCGACCATTCTATGGCCGTCTGGCATTTGAAGCAAATTGGAAAGGTGAAAAAGCTCAATAAGTGGGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS CAA 72 bp ACAGGATCAGCTTCAATGAGAGCTTTCAGTTGGTCATaGTCAACTTCCGATGGCCAGACACTATGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: TGSASMRAFSWS*STSDGQTLCFS
Trigger: TGAGAAGCATAGTGTCTGGCCATCGGAAGTTGACAATGACCAACTGAAAGCTCTCATTGAAGCTGATCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS CAA 90 bp TGCTTCAAATGCCAGACGGCCATAGAATGGTCGATGGTTGAGTTCTaGGGCAACTTCTTGTGTAGTTTTAACAGGATCAGCTTCAATGAG +
Preference number: 6 (lower is better)
Translates to: CFKCQTAIEWSMVEF*GNFLCSFNRISFNE
Trigger: CTCATTGAAGCTGATCCTGTTAAAACTACACAAGAAGTTGCCCAAGAACTCAACCATCGACCATTCTATGGCCGTCTGGCATTTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS GCA 72 bp AGTTGGTCATTGTCAACTTCCGATGGCCAGACACTATaGTTCTCATCTTCAAGGCTCTTGTCTTCTTTGCAA +
Preference number: 6 (lower is better)
Translates to: SWSLSTSDGQTL*FSSSRLLSSLQ
Trigger: TTGCAAAGAAGACAAGAGCCTTGAAGATGAGAAGCATAGTGTCTGGCCATCGGAAGTTGACAATGACCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS CAA 90 bp TCAACTTCCGATGGCCAGACACTATGCTTCTCATCTTCAAGGCTCTaGTCTTCTTTGCAAAACTTCTTGAACCACCACTGTACTATATGT +
Preference number: 6 (lower is better)
Translates to: STSDGQTLCFSSSRL*SSLQNFLNHHCTIC
Trigger: ACATATAGTACAGTGGTGGTTCAAGAAGTTTTGCAAAGAAGACAAGAGCCTTGAAGATGAGAAGCATAGTGTCTGGCCATCGGAAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS CAA 72 bp ATAGAATGGTCGATGGTTGAGTTCTTGGGCAACTTCTaGTGTAGTTTTAACAGGATCAGCTTCAATGAGAGC +
Preference number: 6 (lower is better)
Translates to: IEWSMVEFLGNF*CSFNRISFNES
Trigger: GCTCTCATTGAAGCTGATCCTGTTAAAACTACACAAGAAGTTGCCCAAGAACTCAACCATCGACCATTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS CAA 90 bp GATGGCCAGACACTATGCTTCTCATCTTCAAGGCTCTTGTCTTCTTaGCAAAACTTCTTGAACCACCACTGTACTATATGTTCATTAGCA +
Preference number: 6 (lower is better)
Translates to: DGQTLCFSSSRLLSS*QNFLNHHCTICSLA
Trigger: TGCTAATGAACATATAGTACAGTGGTGGTTCAAGAAGTTTTGCAAAGAAGACAAGAGCCTTGAAGATGAGAAGCATAGTGTCTGGCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572628.5
CDS CAA 72 bp TCATCTTCAAGGCTCTTGTCTTCTTTGCAAAACTTCTaGAACCACCACTGTACTATATGTTCATTAGCAGTT +
Preference number: 6 (lower is better)
Translates to: SSSRLLSSLQNF*NHHCTICSLAV
Trigger: AACTGCTAATGAACATATAGTACAGTGGTGGTTCAAGAAGTTTTGCAAAGAAGACAAGAGCCTTGAAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572628.5