RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCL7B (Homo sapiens)

Ensembl gene IDs: ENSG00000106635

Ensembl transcript IDs: ENST00000223368.7, ENST00000411832.5, ENST00000448175.5, ENST00000454871.5, ENST00000455335.2, ENST00000463858.5, ENST00000464288.5, ENST00000481667.1, ENST00000482231.5, ENST00000486818.5, ENST00000493592.1, ENST00000493671.5

Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTaGCCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCCAGA +
Preference number: 1 (lower is better)
Translates to: PTPAFQPGRLMCAGS*PQCLPLPQQRGAAR
Trigger: TCTGGCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
3UTR TCA 90 bp ATGGGGACGGCGGCCACAAAGGGCTGTCAGCAGCTAGGGTGCCCGTaGGAGGTAGGACCACCTCAGGCATGGGCAGAGCTGGCAGGACAG +
Preference number: 1 (lower is better)
Translates to: MGTAATKGCQQLGCP*EVGPPQAWAELAGQ
Trigger: CTGTCCTGCCAGCTCTGCCCATGCCTGAGGTGGTCCTACCTCTCACGGGCACCCTAGCTGCTGACAGCCCTTTGTGGCCGCCGTCCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
3UTR CCA 90 bp GAGGGCCGGGATGGTGCTAGCTTTCTGACGCCGTCTGCGGCACTGTaGGTTGGTCCACACAGAAGCGCTTCAGGGGCGGGGCACCTGAGT +
Preference number: 1 (lower is better)
Translates to: EGRDGASFLTPSAAL*VGPHRSASGAGHLS
Trigger: ACTCAGGTGCCCCGCCCCTGAAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAGCTAGCACCATCCCGGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
3UTR GCA 90 bp TCCGTGCGGAAGTCGGAGGTGTGTGCTGGGCTCAGGGACTCACTCTaGTGGGGGCTGGGGCTTGAGTTGGTGCTGCTGTCCACCTTAAGC +
Preference number: 1 (lower is better)
Translates to: SVRKSEVCAGLRDSL*WGLGLELVLLSTLS
Trigger: GCTTAAGGTGGACAGCAGCACCAACTCAAGCCCCAGCCCCCAGCAGAGTGAGTCCCTGAGCCCAGCACACACCTCCGACTTCCGCACGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448175.5
3UTR GCA 90 bp TCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTaGCCTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAAT +
Preference number: 1 (lower is better)
Translates to: SSPEGSCVQALDPSA*PYPSNAARPEPECN
Trigger: ATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
3UTR CCA 90 bp CTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTaGAGGTCACAGATGAATCTTGGGGTGGCCGATGCTCCAGCCAAC +
Preference number: 1 (lower is better)
Translates to: LPAAPSRDSGAETAA*RSQMNLGVADAPAN
Trigger: GTTGGCTGGAGCATCGGCCACCCCAAGATTCATCTGTGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR CCA 90 bp CTCTCTCTTCTCGCAGAAGCTGCCAGCAGCTCCGTCCAGAGATTCTaGAGCAGAGACTGCTGCCTGGAGGTCACAGATGAATCTTGGGGT +
Preference number: 1 (lower is better)
Translates to: LSLLAEAASSSVQRF*SRDCCLEVTDESWG
Trigger: ACCCCAAGATTCATCTGTGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAGCTTCTGCGAGAAGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR CCA 90 bp GCTGGCAGGACAGCAAGAAATCTAGACGGACTCTCTGCCCTTGTGTaGAGAAAAGCCCTTCCCTTCCCTCCAATGTCTCTACCCAGTCCT +
Preference number: 1 (lower is better)
Translates to: AGRTARNLDGLSALV*RKALPFPPMSLPSP
Trigger: AGGACTGGGTAGAGACATTGGAGGGAAGGGAAGGGCTTTTCTCCACACAAGGGCAGAGAGTCCGTCTAGATTTCTTGCTGTCCTGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
3UTR TCA 90 bp GGGAAAGTCCGGGAGTCTACAGTCTCCGTTCAAGTTCAAGTAACCTaGGGCACGCTCTCTTCTAGAAGGTGCCTTCCACATCTCTCTCTT +
Preference number: 1 (lower is better)
Translates to: GKVRESTVSVQVQVT*GTLSSRRCLPHLSL
Trigger: AAGAGAGAGATGTGGAAGGCACCTTCTAGAAGAGAGCGTGCCTCAGGTTACTTGAACTTGAACGGAGACTGTAGACTCCCGGACTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
3UTR-3UTR CCA 90 bp CGGGATGGTGCTAGCTTTCTGACGCCGTCTGCGGCACTGTGGGTTGGTCCACACTCCTCCAGGATCTCCTaGCCCAGCGTTGGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: RDGASFLTPSAALWVGPHSSRIS*PSVGGW
Trigger: CCAGCCCCCAACGCTGGGCCAGGAGATCCTGGAGGA...GTGTGGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAGCTAGCACCATCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
3UTR-3UTR GCA 90 bp CATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCTCTTGGGGTGGCCGATaGTCCAGCCAACTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: HVCRLLTPVLALTPATRRSWGGR*SSQLGV
Trigger: CACCCCAAGTTGGCTGGAGCATCGGCCACCCCAAGA...GCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR-3UTR CCA 90 bp AGCGCTTCAGGGGCGGGGCACCTGAGTCTTCCTCTTCCTCAACGACCTGTGTCTTCCTCCAGGATCTCCTaGCCCAGCGTTGGGGGCTGG +
Preference number: 2 (lower is better)
Translates to: SASGAGHLSLPLPQRPVSSSRIS*PSVGGW
Trigger: CCAGCCCCCAACGCTGGGCCAGGAGATCCTGGAGGA...AGACACAGGTCGTTGAGGAAGAGGAAGACTCAGGTGCCCCGCCCCTGAAGCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
3UTR-3UTR TCA 90 bp CATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCATGGTGCTAGCTTTCTaGCGCCGTCTGCGGCACTGT +
Preference number: 2 (lower is better)
Translates to: HVCRLLTPVLALTPATRRMVLAF*RRLRHC
Trigger: ACAGTGCCGCAGACGGCGTCAGAAAGCTAGCACCAT...GCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
3UTR-3UTR GCA 90 bp GGTTGGTCCACACAGAAGCGCTTCAGGGGCGGGGCACCTGAGTCTTCCTCTTCCCTTGACCCCAGTGCTTaGCCTTACCCCAGCAACGCG +
Preference number: 2 (lower is better)
Translates to: GWSTQKRFRGGAPESSSSLDPSA*PYPSNA
Trigger: CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAG...GGAAGAGGAAGACTCAGGTGCCCCGCCCCTGAAGCGCTTCTGTGTGGACCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
3UTR-3UTR GCA 90 bp CGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTCGGAAGGCTCATGTGTaGAGGCTCTTGACCCCAGTG +
Preference number: 2 (lower is better)
Translates to: RQPSSPEGSCVQALDPSARKAHV*RLLTPV
Trigger: CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCG...AGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
3UTR-3UTR GCA 90 bp CAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCGCTGGGAGTCATCCGTaGGGAAGTCGGAGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: QPSSPEGSCVQALDPSACAGSHP*GSRRCV
Trigger: CACACACCTCCGACTTCCGCACGGATGACTCCCAGC...GCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
3UTR-3UTR GCA 90 bp CAAGTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCTTGACCCCAGTGCTTaGCCTTACCCCAGCAACGCG +
Preference number: 2 (lower is better)
Translates to: QVLRQPSSPEGSCVQALDLDPSA*PYPSNA
Trigger: CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAG...GTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
3UTR-3UTR GCA 90 bp CAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCGGAAGGCTCATGTGTaGAGGCTCTTGACCCCAGTG +
Preference number: 2 (lower is better)
Translates to: QPSSPEGSCVQALDPSACRKAHV*RLLTPV
Trigger: CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCG...GCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
3UTR-3UTR GCA 90 bp TGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGTCACTCTTGGGGTGGCCGATaGTCCAGCCAACTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: CQQLRPEILEQRLLPGGHSWGGR*SSQLGV
Trigger: CACCCCAAGTTGGCTGGAGCATCGGCCACCCCAAGA...GTGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR-3UTR CCA 90 bp TGGGTTGGTCCACACAGAAGCGCTTCAGGGGCGGGGCACCTGAGTCTTCCTCTTGTCGGAGGTGTGTGCTaGGCTCAGGGACTCACTCTG +
Preference number: 2 (lower is better)
Translates to: WVGPHRSASGAGHLSLPLVGGVC*AQGLTL
Trigger: CAGAGTGAGTCCCTGAGCCCAGCACACACCTCCGAC...AAGAGGAAGACTCAGGTGCCCCGCCCCTGAAGCGCTTCTGTGTGGACCAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448175.5
3UTR-3UTR CCA 90 bp GTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATCTCCTGGCCCAGCGTTaGGGGCTGGGAGTCATCCGT +
Preference number: 2 (lower is better)
Translates to: VLALTPATRRGQNQNAINLLAQR*GLGVIR
Trigger: ACGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAG...ATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
3UTR-3UTR GCA 90 bp AAGCTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGCGGAAGGCTCATGTGTaGAGGCTCTTGACCCCAGTG +
Preference number: 2 (lower is better)
Translates to: KLPAAPSRDSGAETAAWRRKAHV*RLLTPV
Trigger: CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCG...CCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR-3UTR GCA 90 bp CATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCTTCTGGAGCAGAGACTaGTGCCTGGAGGTCACAGAT +
Preference number: 2 (lower is better)
Translates to: HVCRLLTPVLALTPATRRFWSRD*CLEVTD
Trigger: ATCTGTGACCTCCAGGCAGCAGTCTCTGCTCCAGAA...GCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR-3UTR GCA 90 bp AGAAGCTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGACTTTCTGACGCCGTCTaGGGCACTGTGGGTTGGTCC +
Preference number: 2 (lower is better)
Translates to: RSCQQLRPEILEQRLLPGLSDAV*GTVGWS
Trigger: GGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAG...TCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454871.5
3UTR-3UTR CCA 90 bp GCACTGTGGGTTGGTCCACACAGAAGCGCTTCAGGGGCGGGGCACCTGAGTCTTGTCACAGATGAATCTTaGGGTGGCCGATGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: ALWVGPHRSASGAGHLSLVTDES*GGRCSS
Trigger: GCTGGAGCATCGGCCACCCCAAGATTCATCTGTGAC...AAGACTCAGGTGCCCCGCCCCTGAAGCGCTTCTGTGTGGACCAACCCACAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454871.5
3UTR-3UTR TCA 90 bp AAGCTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGATGTGTGCAGGCTCTTaGCCCCAGTGCTTGCCCTTA +
Preference number: 2 (lower is better)
Translates to: KLPAAPSRDSGAETAAWRMCAGS*PQCLPL
Trigger: TAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACAT...CCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR-3UTR TCA 90 bp CAAGTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACATGTGTGCAGGCTCTTaGCCCCAGTGCTTGCCCTTA +
Preference number: 2 (lower is better)
Translates to: QVLRQPSSPEGSCVQALDMCAGS*PQCLPL
Trigger: TAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACAT...GTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
3UTR-3UTR GCA 90 bp AGAAGCTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGATCTTCTCGCAGAAGCTaGCAGCAGCTCCGTCCAGAG +
Preference number: 2 (lower is better)
Translates to: RSCQQLRPEILEQRLLPGSSRRS*QQLRPE
Trigger: CTCTGGACGGAGCTGCTGGCAGCTTCTGCGAGAAGA...TCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAGCTTCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR-3UTR CCA 90 bp CAACAGCAGCCTACAGGGCCCCCAGTCCTAGGGGAAAGTCCGGGAGTCTACAGTTCCGTCCAGAGATTCTaGAGCAGAGACTGCTGCCTG +
Preference number: 2 (lower is better)
Translates to: QQQPTGPPVLGESPGVYSSVQRF*SRDCCL
Trigger: CAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGA...ACTGTAGACTCCCGGACTTTCCCCTAGGACTGGGGGCCCTGTAGGCTGCTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
3UTR-3UTR GCA 90 bp GCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGGCAAGTAGACACAGGTaGCAGGGTCAGGAAGATGAT +
Preference number: 2 (lower is better)
Translates to: AHVCRLLTPVLALTPATRASRHR*QGQEDD
Trigger: ATCATCTTCCTGACCCTGGCACCTGTGTCTACTTGC...CCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR-3UTR CCA 90 bp CTTCCCTTCCCTCCAATGTCTCTACCCAGTCCTCCAACAGCAGCCTACAGGGCCGTCACAGATGAATCTTaGGGTGGCCGATGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: LPFPPMSLPSPPTAAYRAVTDES*GGRCSS
Trigger: GCTGGAGCATCGGCCACCCCAAGATTCATCTGTGAC...GGCCCTGTAGGCTGCTGTTGGAGGACTGGGTAGAGACATTGGAGGGAAGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
3UTR-3UTR CCA 90 bp GTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCTCAGACACGGAACTCTaGTTGCTGTTTTCGTCTTGG +
Preference number: 2 (lower is better)
Translates to: VLRQPSSPEGSCVQALDPSDTEL*LLFSSW
Trigger: CCAAGACGAAAACAGCAACCAGAGTTCCGTGTCTGA...GGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448175.5
3UTR-3UTR GCA 90 bp CTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGTCAGCAAGTAGACACAGGTaGCAGGGTCAGGAAGATGAT +
Preference number: 2 (lower is better)
Translates to: LPAAPSRDSGAETAAWRSASRHR*QGQEDD
Trigger: ATCATCTTCCTGACCCTGGCACCTGTGTCTACTTGC...TGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR-3UTR TCA 90 bp GGGCAGTTTGTGACAAGAGGCAGGGATGCTGGAATGACAGGTAGAGGTGAGAACCCTGGAGGTCACAGATaGATCTTGGGGTGGCCGATG +
Preference number: 2 (lower is better)
Translates to: GQFVTRGRDAGMTGRGENPGGHR*ILGWPM
Trigger: CATCGGCCACCCCAAGATTCATCTGTGACCTCCAGG...GTTCTCACCTCTACCTGTCATTCCAGCATCCCTGCCTCTTGTCACAAACTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
3UTR-3UTR TCA 90 bp GGGGATGGGTACTGTTGTCAGAACCTCAAATTCTTGCTGGGGCAGTTTGTGACACAGCTAGGGTGCCCGTaGGAGGTAGGACCACCTCAG +
Preference number: 2 (lower is better)
Translates to: GDGYCCQNLKFLLGQFVTQLGCP*EVGPPQ
Trigger: CTGAGGTGGTCCTACCTCTCACGGGCACCCTAGCTG...TGTCACAAACTGCCCCAGCAAGAATTTGAGGTTCTGACAACAGTACCCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
3UTR-3UTR GCA 90 bp TCAACGACCTGTGTCTCTAGTGGAACTGGTTCTTCCTTGGTGAGGGTAGGAGGTGCTGGGAGTCATCCGTaGGGAAGTCGGAGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: STTCVSSGTGSSLVRVGGAGSHP*GSRRCV
Trigger: CACACACCTCCGACTTCCGCACGGATGACTCCCAGC...ACCTCCTACCCTCACCAAGGAAGAACCAGTTCCACTAGAGACACAGGTCGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
3UTR CAA 90 bp TCCTCTTCCTCAACGACCTGTGTCTCTAGTGGAACTGGTTCTTCCTaGGTGAGGGTAGGAGGTTCATCAGCAACTTCCGAGGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: SSSSTTCVSSGTGSS*VRVGGSSATSEEGR
Trigger: CCTGCCCTCCTCGGAAGTTGCTGATGAACCTCCTACCCTCACCAAGGAAGAACCAGTTCCACTAGAGACACAGGTCGTTGAGGAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
3UTR-3UTR CCA 90 bp GCAAGTAGACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTGCAGAGACTGCTGCCTaGAGGTCACAGATGAATCTT +
Preference number: 2 (lower is better)
Translates to: ASRHRCQGQEDDATAPSPAETAA*RSQMNL
Trigger: AAGATTCATCTGTGACCTCCAGGCAGCAGTCTCTGC...AGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTCTACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR TCA 72 bp GCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTaGCCCCAGTGCTTGCCCTTACCCCAGCAACGCGGC +
Preference number: 3 (lower is better)
Translates to: AFQPGRLMCAGS*PQCLPLPQQRG
Trigger: GCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
3UTR-3UTR CAA 90 bp CTTTCTGACGCCGTCTGCGGCACTGTGGGTTGGTCCACACAGAAGCGCTTCAGGTCTCCTGGCCCAGCGTaGGGGGCTGGGAGTCATCCG +
Preference number: 3 (lower is better)
Translates to: LSDAVCGTVGWSTQKRFRSPGPA*GAGSHP
Trigger: CGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAGA...CCTGAAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
3UTR GCA 72 bp GAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTaGCCTTACCCCAGCAACGCGGCGCGGCCAGAACCA +
Preference number: 3 (lower is better)
Translates to: EGSCVQALDPSA*PYPSNAARPEP
Trigger: TGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
3UTR CCA 72 bp GATGGTGCTAGCTTTCTGACGCCGTCTGCGGCACTGTaGGTTGGTCCACACAGAAGCGCTTCAGGGGCGGGG +
Preference number: 3 (lower is better)
Translates to: DGASFLTPSAAL*VGPHRSASGAG
Trigger: CCCCGCCCCTGAAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAGCTAGCACCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
3UTR GCA 72 bp TCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTaGAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCA +
Preference number: 3 (lower is better)
Translates to: SYASLPARKAHV*RLLTPVLALTP
Trigger: TGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
3UTR-3UTR CAA 90 bp CCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCCATGTGTGCAGGCTCTaGACCCCAGTGCTTGCCCTT +
Preference number: 3 (lower is better)
Translates to: PEGSCVQALDPSACPYPSHVCRL*TPVLAL
Trigger: AAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATG...GCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
3UTR-3UTR CAA 90 bp ACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGGCCCATGTGTGCAGGCTCTaGACCCCAGTGCTTGCCCTT +
Preference number: 3 (lower is better)
Translates to: TPATRRGQNQNAINRGRAHVCRL*TPVLAL
Trigger: AAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATG...GGCCCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
3UTR-3UTR CAA 90 bp GACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTACGCCAGCATGTGTGCAGGCTCTaGACCCCAGTGCTTGCCCTT +
Preference number: 3 (lower is better)
Translates to: DTGARVRKMMLQPQVLRQHVCRL*TPVLAL
Trigger: AAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATG...CTGGCGTAGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR-3UTR CAA 90 bp GCACTGTGGGTTGGTCCACACAGAAGCGCTTCAGGGGCGGGGCACCTGAGTCTTGGAACTGGTTCTTCCTaGGTGAGGGTAGGAGGTTCA +
Preference number: 3 (lower is better)
Translates to: ALWVGPHRSASGAGHLSLGTGSS*VRVGGS
Trigger: TGAACCTCCTACCCTCACCAAGGAAGAACCAGTTCC...AAGACTCAGGTGCCCCGCCCCTGAAGCGCTTCTGTGTGGACCAACCCACAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
3UTR CCA 72 bp AGCAGAGACTGCTGCCTGGAGGTCACAGATGAATCTTaGGGTGGCCGATGCTCCAGCCAACTTGGGGTGCAA +
Preference number: 3 (lower is better)
Translates to: SRDCCLEVTDES*GGRCSSQLGVQ
Trigger: TTGCACCCCAAGTTGGCTGGAGCATCGGCCACCCCAAGATTCATCTGTGACCTCCAGGCAGCAGTCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR CCA 72 bp CTCGCAGAAGCTGCCAGCAGCTCCGTCCAGAGATTCTaGAGCAGAGACTGCTGCCTGGAGGTCACAGATGAA +
Preference number: 3 (lower is better)
Translates to: LAEAASSSVQRF*SRDCCLEVTDE
Trigger: TTCATCTGTGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAGCTTCTGCGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR TCA 72 bp ATTCTGGAGCAGAGACTGCTGCCTGGAGGTCACAGATaGATCTTGGGGTGGCCGATGCTCCAGCCAACTTGG +
Preference number: 3 (lower is better)
Translates to: ILEQRLLPGGHR*ILGWPMLQPTW
Trigger: CCAAGTTGGCTGGAGCATCGGCCACCCCAAGATTCATCTGTGACCTCCAGGCAGCAGTCTCTGCTCCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
3UTR-3UTR CAA 90 bp GGGCAGTTTGTGACAAGAGGCAGGGATGCTGGAATGACAGGTAGAGGTGAGAACACGGACTCTCTGCCCTaGTGTGGAGAAAAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: GQFVTRGRDAGMTGRGENTDSLP*CGEKPF
Trigger: GAAGGGCTTTTCTCCACACAAGGGCAGAGAGTCCGT...GTTCTCACCTCTACCTGTCATTCCAGCATCCCTGCCTCTTGTCACAAACTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
3UTR TCA 72 bp CGGGAGTCTACAGTCTCCGTTCAAGTTCAAGTAACCTaGGGCACGCTCTCTTCTAGAAGGTGCCTTCCACAT +
Preference number: 3 (lower is better)
Translates to: RESTVSVQVQVT*GTLSSRRCLPH
Trigger: ATGTGGAAGGCACCTTCTAGAAGAGAGCGTGCCTCAGGTTACTTGAACTTGAACGGAGACTGTAGACTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
3UTR CCA 72 bp ACAGCAAGAAATCTAGACGGACTCTCTGCCCTTGTGTaGAGAAAAGCCCTTCCCTTCCCTCCAATGTCTCTA +
Preference number: 3 (lower is better)
Translates to: TARNLDGLSALV*RKALPFPPMSL
Trigger: TAGAGACATTGGAGGGAAGGGAAGGGCTTTTCTCCACACAAGGGCAGAGAGTCCGTCTAGATTTCTTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
3UTR CCA 72 bp TTTCTAGAAACTGAGCTGAAGGGGTACTGTGGGGGATaGGTACTGTTGTCAGAACCTCAAATTCTTGCTGGG +
Preference number: 3 (lower is better)
Translates to: FLETELKGYCGG*VLLSEPQILAG
Trigger: CCCAGCAAGAATTTGAGGTTCTGACAACAGTACCCATCCCCCACAGTACCCCTTCAGCTCAGTTTCTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR CCA 90 bp GTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCCTCCTGGCCCAGCGTTaGGGGCTGGGAGTCATCCGT +
Preference number: 4 (lower is better)
Translates to: VCRLLTPVLALTPATRRGLLAQR*GLGVIR
Trigger: ACGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAG...GCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp GGCGGCCACAAAGGGCTGTCAGCAGCTAGGGTGCCCGTGAGAGGTAGGACCACCCCCAGCGTTGGGGGCTaGGAGTCATCCGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GGHKGLSAARVPVRGRTTPSVGG*ESSVRK
Trigger: CTTCCGCACGGATGACTCCCAGCCCCCAACGCTGGG...GGTGGTCCTACCTCTCACGGGCACCCTAGCTGCTGACAGCCCTTTGTGGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000223368.7
CDS-3UTR CCA 90 bp TGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCCCAGCGTTGGGGGCTaGGAGTCATCCGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: CVQALDPSACPYPSNAARPSVGG*ESSVRK
Trigger: CTTCCGCACGGATGACTCCCAGCCCCCAACGCTGGG...CCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp TGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCTCCTGGCCCAGCGTTaGGGGCTGGGAGTCATCCGT +
Preference number: 4 (lower is better)
Translates to: CVQALDPSACPYPSNAARLLAQR*GLGVIR
Trigger: ACGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAG...CCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp GTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCCTTGACCCCAGTGCTTaGCCTTACCCCAGCAACGCG +
Preference number: 4 (lower is better)
Translates to: VCRLLTPVLALTPATRRGLDPSA*PYPSNA
Trigger: CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAG...GCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp GTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCGTCGGAGGTGTGTGCTaGGCTCAGGGACTCACTCTG +
Preference number: 4 (lower is better)
Translates to: VCRLLTPVLALTPATRRGVGGVC*AQGLTL
Trigger: CAGAGTGAGTCCCTGAGCCCAGCACACACCTCCGAC...GCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp CCCAGCGTTGGGGGCTGGGAGTCATCCGTGCGGAAGTCGGAGGTGTGTGCTGGGGTCGGAGGTGTGTGCTaGGCTCAGGGACTCACTCTG +
Preference number: 4 (lower is better)
Translates to: PSVGGWESSVRKSEVCAGVGGVC*AQGLTL
Trigger: CAGAGTGAGTCCCTGAGCCCAGCACACACCTCCGAC...CCCAGCACACACCTCCGACTTCCGCACGGATGACTCCCAGCCCCCAACGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR GCA 90 bp GTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCTCTTCTCGCAGAAGCTaGCAGCAGCTCCGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VCRLLTPVLALTPATRRGSSRRS*QQLRPE
Trigger: CTCTGGACGGAGCTGCTGGCAGCTTCTGCGAGAAGA...GCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR CCA 90 bp GGGCTGGGAGTCATCCGTGCGGAAGTCGGAGGTGTGTGCTGGGCTCAGGGACTCGTCGGAGGTGTGTGCTaGGCTCAGGGACTCACTCTG +
Preference number: 4 (lower is better)
Translates to: GLGVIRAEVGGVCWAQGLVGGVC*AQGLTL
Trigger: CAGAGTGAGTCCCTGAGCCCAGCACACACCTCCGAC...GAGTCCCTGAGCCCAGCACACACCTCCGACTTCCGCACGGATGACTCCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448175.5
CDS-3UTR CCA 90 bp TCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCCCAGCGTTGGGGGCTaGGAGTCATCCGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SCVQALDPSACPYPSNAAPSVGG*ESSVRK
Trigger: CTTCCGCACGGATGACTCCCAGCCCCCAACGCTGGG...CGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp CAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCTCCTGGCCCAGCGTTaGGGGCTGGGAGTCATCCGT +
Preference number: 4 (lower is better)
Translates to: QPSSPEGSCVQALDPSACLLAQR*GLGVIR
Trigger: ACGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAG...GCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp TACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGTCCTCCAGGATCTCCTaGCCCAGCGTTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: YASLPARKAHVCRLLTPVSSRIS*PSVGGW
Trigger: CCAGCCCCCAACGCTGGGCCAGGAGATCCTGGAGGA...CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp GCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGTCCTCCAGGATCTCCTaGCCCAGCGTTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AHVCRLLTPVLALTPATRSSRIS*PSVGGW
Trigger: CCAGCCCCCAACGCTGGGCCAGGAGATCCTGGAGGA...CCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp CTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTTCCTCCAGGATCTCCTaGCCCAGCGTTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRQPSSPEGSCVQALDPSSSRIS*PSVGGW
Trigger: CCAGCCCCCAACGCTGGGCCAGGAGATCCTGGAGGA...ACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp GTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCTGCGGCACTGTGGGTTaGTCCACACAGAAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: VCRLLTPVLALTPATRRGCGTVG*STQKRF
Trigger: GAAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCA...GCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
3UTR CAA 72 bp AGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTaGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGG +
Preference number: 4 (lower is better)
Translates to: SLPARKAHVCRL*TPVLALTPATR
Trigger: CCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR TCA 90 bp GTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCATGTGTGCAGGCTCTTaGCCCCAGTGCTTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: VCRLLTPVLALTPATRRGMCAGS*PQCLPL
Trigger: TAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACAT...GCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR TCA 90 bp CGGGATGGTGCTAGCTTTCTGACGCCGTCTGCGGCACTGTGGGTTGGTCCACACGGCTGGGGGACTGCTTaGGGCCAGGAGTTCACAACC +
Preference number: 4 (lower is better)
Translates to: RDGASFLTPSAALWVGPHGWGTA*GQEFTT
Trigger: GGTTGTGAACTCCTGGCCTCAAGCAGTCCCCCAGCC...GTGTGGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAGCTAGCACCATCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448175.5
CDS-3UTR GCA 90 bp CGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTGCTGGGAGTCATCCGTaGGGAAGTCGGAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RQPSSPEGSCVQALDPSAAGSHP*GSRRCV
Trigger: CACACACCTCCGACTTCCGCACGGATGACTCCCAGC...AGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp CATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCCTTGACCCCAGTGCTTaGCCTTACCCCAGCAACGCG +
Preference number: 4 (lower is better)
Translates to: HVCRLLTPVLALTPATRRLDPSA*PYPSNA
Trigger: CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAG...GCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp TGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCGGAAGGCTCATGTGTaGAGGCTCTTGACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: CVQALDPSACPYPSNAARRKAHV*RLLTPV
Trigger: CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCG...CCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR TCA 90 bp CAAGTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCAGCTAGGGTGCCCGTaGGAGGTAGGACCACCTCAG +
Preference number: 4 (lower is better)
Translates to: QVLRQPSSPEGSCVQALDQLGCP*EVGPPQ
Trigger: CTGAGGTGGTCCTACCTCTCACGGGCACCCTAGCTG...GTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGACTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR TCA 90 bp GTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCGCAGGGATGCTGGAATaGCAGGTAGAGGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: VCRLLTPVLALTPATRRGAGMLE*QVEVRT
Trigger: TGTTCTCACCTCTACCTGTCATTCCAGCATCCCTGC...GCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR GCA 90 bp CGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTGAAGTCGGAGGTGTGTaGTGGGCTCAGGGACTCACT +
Preference number: 4 (lower is better)
Translates to: RQPSSPEGSCVQALDPSAEVGGV*WAQGLT
Trigger: AGTGAGTCCCTGAGCCCAGCACACACCTCCGACTTC...AGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp TACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGGCTGGGAGTCATCCGTaGGGAAGTCGGAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: YASLPARKAHVCRLLTPVAGSHP*GSRRCV
Trigger: CACACACCTCCGACTTCCGCACGGATGACTCCCAGC...CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp GCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCTGGGAGTCATCCGTaGGGAAGTCGGAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ARKAHVCRLLTPVLALTPAGSHP*GSRRCV
Trigger: CACACACCTCCGACTTCCGCACGGATGACTCCCAGC...TGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp GGTTGGTCCACACAGAAGCGCTTCAGGGGCGGGGCACCTGAGTCTTCCTCTTCCCTTTCTGACGCCGTCTaGGGCACTGTGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GWSTQKRFRGGAPESSSSLSDAV*GTVGWS
Trigger: GGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAG...GGAAGAGGAAGACTCAGGTGCCCCGCCCCTGAAGCGCTTCTGTGTGGACCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR GCA 90 bp GCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCACTTTCTGACGCCGTCTaGGGCACTGTGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: ARKAHVCRLLTPVLALTPLSDAV*GTVGWS
Trigger: GGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAG...TGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp GGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGCTTGACCCCAGTGCTTaGCCTTACCCCAGCAACGCG +
Preference number: 4 (lower is better)
Translates to: GSCVQALDPSACPYPSNALDPSA*PYPSNA
Trigger: CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAG...CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp GTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCCGGAAGGCTCATGTGTaGAGGCTCTTGACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: VLRQPSSPEGSCVQALDPRKAHV*RLLTPV
Trigger: CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCG...GGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp GTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCTTCTGGAGCAGAGACTaGTGCCTGGAGGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: VCRLLTPVLALTPATRRGFWSRD*CLEVTD
Trigger: ATCTGTGACCTCCAGGCAGCAGTCTCTGCTCCAGAA...GCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR CCA 90 bp GCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGGTCGGAGGTGTGTGCTaGGCTCAGGGACTCACTCTG +
Preference number: 4 (lower is better)
Translates to: AHVCRLLTPVLALTPATRVGGVC*AQGLTL
Trigger: CAGAGTGAGTCCCTGAGCCCAGCACACACCTCCGAC...CCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp ACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTACGCCAGCCTTCCTCCAGGATCTCCTaGCCCAGCGTTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TGARVRKMMLQPQVLRQPSSRIS*PSVGGW
Trigger: CCAGCCCCCAACGCTGGGCCAGGAGATCCTGGAGGA...AGGCTGGCGTAGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000454871.5
CDS-3UTR CCA 90 bp AGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCCGTCTGCGGCACTGTaGGTTGGTCCACACAGAAGC +
Preference number: 4 (lower is better)
Translates to: SLPARKAHVCRLLTPVLAPSAAL*VGPHRS
Trigger: GCTTCTGTGTGGACCAACCCACAGTGCCGCAGACGG...GGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp GTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCCTCTCTGCCCTTGTGTaGAGAAAAGCCCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VCRLLTPVLALTPATRRGLSALV*RKALPF
Trigger: GAAGGGAAGGGCTTTTCTCCACACAAGGGCAGAGAG...GCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR TCA 90 bp AGGGCCCCCAGTCCTAGGGGAAAGTCCGGGAGTCTACAGTCTCCGTTCAAGTTCCAGGGGCGGGGCACCTaGGTCTTCCTCTTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: RAPSPRGKSGSLQSPFKFQGRGT*VFLFLN
Trigger: GTTGAGGAAGAGGAAGACTCAGGTGCCCCGCCCCTG...GAACTTGAACGGAGACTGTAGACTCCCGGACTTTCCCCTAGGACTGGGGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR TCA 90 bp CTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTATGGTGCTAGCTTTCTaGCGCCGTCTGCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: LRQPSSPEGSCVQALDPSMVLAF*RRLRHC
Trigger: ACAGTGCCGCAGACGGCGTCAGAAAGCTAGCACCAT...ACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp GCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGAAGTCGGAGGTGTGTaGTGGGCTCAGGGACTCACT +
Preference number: 4 (lower is better)
Translates to: ARKAHVCRLLTPVLALTPEVGGV*WAQGLT
Trigger: AGTGAGTCCCTGAGCCCAGCACACACCTCCGACTTC...TGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp TGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGTCACCTTTCTGACGCCGTCTaGGGCACTGTGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: CQQLRPEILEQRLLPGGHLSDAV*GTVGWS
Trigger: GGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAG...GTGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR GCA 90 bp AGCGCTTCAGGGGCGGGGCACCTGAGTCTTCCTCTTCCTCAACGACCTGTGTCTCTTTCTGACGCCGTCTaGGGCACTGTGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SASGAGHLSLPLPQRPVSLSDAV*GTVGWS
Trigger: GGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAG...AGACACAGGTCGTTGAGGAAGAGGAAGACTCAGGTGCCCCGCCCCTGAAGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR GCA 90 bp CTTGGTGAGGGTAGGAGGTTCATCAGCAACTTCCGAGGAGGGCAGGGAGGGCTCCTTGACCCCAGTGCTTaGCCTTACCCCAGCAACGCG +
Preference number: 4 (lower is better)
Translates to: LGEGRRFISNFRGGQGGLLDPSA*PYPSNA
Trigger: CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAG...GAGCCCTCCCTGCCCTCCTCGGAAGTTGCTGATGAACCTCCTACCCTCACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR GCA 90 bp ACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGGCCCTTGACCCCAGTGCTTaGCCTTACCCCAGCAACGCG +
Preference number: 4 (lower is better)
Translates to: TPATRRGQNQNAINRGRALDPSA*PYPSNA
Trigger: CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAG...GGCCCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp CTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTCGGAAGGCTCATGTGTaGAGGCTCTTGACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LRQPSSPEGSCVQALDPSRKAHV*RLLTPV
Trigger: CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCG...ACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp AAGCTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGTCTTGGGGTGGCCGATaGTCCAGCCAACTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: KLPAAPSRDSGAETAAWRSWGGR*SSQLGV
Trigger: CACCCCAAGTTGGCTGGAGCATCGGCCACCCCAAGA...CCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR GCA 90 bp TGGGTTGGTCCACACAGAAGCGCTTCAGGGGCGGGGCACCTGAGTCTTCCTCTTTCTTGGGGTGGCCGATaGTCCAGCCAACTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: WVGPHRSASGAGHLSLPLSWGGR*SSQLGV
Trigger: CACCCCAAGTTGGCTGGAGCATCGGCCACCCCAAGA...AAGAGGAAGACTCAGGTGCCCCGCCCCTGAAGCGCTTCTGTGTGGACCAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000454871.5
CDS-3UTR GCA 90 bp TACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCCGAGATTGCGCCAATaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: YASLPARKAHVCRLLTPVPRLRQ*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCATTGGCGCAATCTCGG...CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455335.2
CDS-3UTR GCA 90 bp GGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCAGTGAGCCGAGATTaGGCCAATGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSCVQALDPSACPYPSNAAVSRD*ANALQP
Trigger: AGGCTGGAGTGCATTGGCGCAATCTCGGCTCACTGC...CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455335.2
CDS-3UTR GCA 90 bp GGTTGGTCCACACAGAAGCGCTTCAGGGGCGGGGCACCTGAGTCTTCCTCTTCCTCAAGGCTGGGGGACTaGTTGAGGCCAGGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: GWSTQKRFRGGAPESSSSSRLGD*LRPGVH
Trigger: GTGAACTCCTGGCCTCAAGCAGTCCCCCAGCCTTGA...GGAAGAGGAAGACTCAGGTGCCCCGCCCCTGAAGCGCTTCTGTGTGGACCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448175.5
CDS-3UTR CCA 90 bp GTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATCCCAGCGTTGGGGGCTaGGAGTCATCCGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: VLALTPATRRGQNQNAINPSVGG*ESSVRK
Trigger: CTTCCGCACGGATGACTCCCAGCCCCCAACGCTGGG...ATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp CACAAAGGGCTGTCAGCAGCTAGGGTGCCCGTGAGAGGTAGGACCACCTCAGGCTGCGGCACTGTGGGTTaGTCCACACAGAAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: HKGLSAARVPVRGRTTSGCGTVG*STQKRF
Trigger: GAAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCA...GCCTGAGGTGGTCCTACCTCTCACGGGCACCCTAGCTGCTGACAGCCCTTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR CCA 90 bp CGGGATGGTGCTAGCTTTCTGACGCCGTCTGCGGCACTGTGGGTTGGTCCACACTGCGGCACTGTGGGTTaGTCCACACAGAAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: RDGASFLTPSAALWVGPHCGTVG*STQKRF
Trigger: GAAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCA...GTGTGGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAGCTAGCACCATCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR CCA 90 bp CCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCTGCGGCACTGTGGGTTaGTCCACACAGAAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: PEGSCVQALDPSACPYPSCGTVG*STQKRF
Trigger: GAAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCA...GCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp TCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGTGCGGCACTGTGGGTTaGTCCACACAGAAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SCVQALDPSACPYPSNAACGTVG*STQKRF
Trigger: GAAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCA...CGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp AGCGCTTCAGGGGCGGGGCACCTGAGTCTTCCTCTTCCTCAACGACCTGTGTCTCCGTCTGCGGCACTGTaGGTTGGTCCACACAGAAGC +
Preference number: 4 (lower is better)
Translates to: SASGAGHLSLPLPQRPVSPSAAL*VGPHRS
Trigger: GCTTCTGTGTGGACCAACCCACAGTGCCGCAGACGG...AGACACAGGTCGTTGAGGAAGAGGAAGACTCAGGTGCCCCGCCCCTGAAGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR TCA 90 bp AGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAACAGGGGCGGGGCACCTaGGTCTTCCTCTTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: SACPYPSNAARPEPECNKQGRGT*VFLFLN
Trigger: GTTGAGGAAGAGGAAGACTCAGGTGCCCCGCCCCTG...TTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR TCA 90 bp CCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGGCCAGGATGGTGCTAGCTTTCTaGCGCCGTCTGCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: PATRRGQNQNAINRGRARMVLAF*RRLRHC
Trigger: ACAGTGCCGCAGACGGCGTCAGAAAGCTAGCACCAT...CCTGGCCCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR TCA 90 bp CAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCATGTGTGCAGGCTCTTaGCCCCAGTGCTTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: QPSSPEGSCVQALDPSACMCAGS*PQCLPL
Trigger: TAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACAT...GCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR TCA 90 bp CAAGTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCTGGAGGTCACAGATaGATCTTGGGGTGGCCGATG +
Preference number: 4 (lower is better)
Translates to: QVLRQPSSPEGSCVQALDPGGHR*ILGWPM
Trigger: CATCGGCCACCCCAAGATTCATCTGTGACCTCCAGG...GTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR TCA 90 bp GGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTACGCCAGCCTTCCCCTGGAGGTCACAGATaGATCTTGGGGTGGCCGATG +
Preference number: 4 (lower is better)
Translates to: GARVRKMMLQPQVLRQPSPGGHR*ILGWPM
Trigger: CATCGGCCACCCCAAGATTCATCTGTGACCTCCAGG...GGAAGGCTGGCGTAGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR TCA 90 bp CTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGTCATGCTGGGGCAGTTTGTaGCAAGAGGCAGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: LPAAPSRDSGAETAAWRSCWGSL*QEAGML
Trigger: CAGCATCCCTGCCTCTTGTCACAAACTGCCCCAGCA...TGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR GCA 90 bp AGCGCTTCAGGGGCGGGGCACCTGAGTCTTCCTCTTCCTCAACGACCTGTGTCTCGGAAGGCTCATGTGTaGAGGCTCTTGACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SASGAGHLSLPLPQRPVSRKAHV*RLLTPV
Trigger: CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCG...AGACACAGGTCGTTGAGGAAGAGGAAGACTCAGGTGCCCCGCCCCTGAAGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR CCA 90 bp GAGCAAGTAGACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTCCTGGCCCAGCGTTaGGGGCTGGGAGTCATCCGT +
Preference number: 4 (lower is better)
Translates to: EQVDTGARVRKMMLQPQVLLAQR*GLGVIR
Trigger: ACGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAG...GACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTCTACTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000454871.5
CDS-3UTR CCA 90 bp AGGATCTCCTGGCCCAGCGTTGGGGGCTGGGAGTCATCCGTGCGGAAGTCGGAGGCAGAGACTGCTGCCTaGAGGTCACAGATGAATCTT +
Preference number: 4 (lower is better)
Translates to: RISWPSVGGWESSVRKSEAETAA*RSQMNL
Trigger: AAGATTCATCTGTGACCTCCAGGCAGCAGTCTCTGC...CTCCGACTTCCGCACGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAGATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454871.5
CDS-3UTR TCA 90 bp CTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGAGAGAGGAATTGGCTaGGGCATCAGAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LRQPSSPEGSCVQALDPSERGIG*GIRRKA
Trigger: GGCTTTCCTTCTGATGCCTCAGCCAATTCCTCTCTC...ACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000455335.2
CDS-3UTR TCA 90 bp ACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGGCCATGTGTGCAGGCTCTTaGCCCCAGTGCTTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: TPATRRGQNQNAINRGRAMCAGS*PQCLPL
Trigger: TAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACAT...GGCCCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR TCA 90 bp GCAAGTAGACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTCAGCTAGGGTGCCCGTaGGAGGTAGGACCACCTCAG +
Preference number: 4 (lower is better)
Translates to: ASRHRCQGQEDDATAPSPQLGCP*EVGPPQ
Trigger: CTGAGGTGGTCCTACCTCTCACGGGCACCCTAGCTG...AGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTCTACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR GCA 90 bp AGACATGAGCGCTCCTCTTCTCGGGAGCAAGTAGACACAGGTGCCAGGGTCAGGGAAGTCGGAGGTGTGTaGTGGGCTCAGGGACTCACT +
Preference number: 4 (lower is better)
Translates to: RHERSSSREQVDTGARVREVGGV*WAQGLT
Trigger: AGTGAGTCCCTGAGCCCAGCACACACCTCCGACTTC...CCTGACCCTGGCACCTGTGTCTACTTGCTCCCGAGAAGAGGAGCGCTCATGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000454871.5
CDS-3UTR GCA 90 bp AGCTTTCTGACGCCGTCTGCGGCACTGTGGGTTGGTCCACACAGAAGCGCTTCACGGAAGGCTCATGTGTaGAGGCTCTTGACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: SFLTPSAALWVGPHRSASRKAHV*RLLTPV
Trigger: CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCG...TGAAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR GCA 90 bp GACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTACGCCAGTCTTCTCGCAGAAGCTaGCAGCAGCTCCGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: DTGARVRKMMLQPQVLRQSSRRS*QQLRPE
Trigger: CTCTGGACGGAGCTGCTGGCAGCTTCTGCGAGAAGA...CTGGCGTAGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR GCA 90 bp GCACTGTGGGTTGGTCCACACAGAAGCGCTTCAGGGGCGGGGCACCTGAGTCTTGACTCTGTCTCTCCTTaGTGTCTGTCACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: ALWVGPHRSASGAGHLSLDSVSP*CLSQEP
Trigger: GGGTTCCTGTGACAGACAGCAAGGAGAGACAGAGTC...AAGACTCAGGTGCCCCGCCCCTGAAGCGCTTCTGTGTGGACCAACCCACAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448175.5
CDS-3UTR GCA 90 bp GTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCACACGGAACTCTGGTTaGTGTTTTCGTCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VLRQPSSPEGSCVQALDPTRNSG*CFRLGR
Trigger: CCTCCCAAGACGAAAACAGCAACCAGAGTTCCGTGT...GGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448175.5
CDS-3UTR CCA 90 bp CGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTCAGACACGGAACTCTaGTTGCTGTTTTCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RQPSSPEGSCVQALDPSASDTEL*LLFSSW
Trigger: CCAGGACGAAAACAGCAACCAGAGTTCCGTGTCTGA...AGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000455335.2
CDS-3UTR CCA 90 bp CTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGCCGTCTGCGGCACTGTaGGTTGGTCCACACAGAAGC +
Preference number: 4 (lower is better)
Translates to: LTPATRRGQNQNAINRGRPSAAL*VGPHRS
Trigger: GCTTCTGTGTGGACCAACCCACAGTGCCGCAGACGG...CCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CCA 90 bp GTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCGCAGAGACTGCTGCCTaGAGGTCACAGATGAATCTT +
Preference number: 4 (lower is better)
Translates to: VLRQPSSPEGSCVQALDPAETAA*RSQMNL
Trigger: AAGATTCATCTGTGACCTCCAGGCAGCAGTCTCTGC...GGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR CCA 90 bp ACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGGCCTCCGTCCAGAGATTCTaGAGCAGAGACTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TPATRRGQNQNAINRGRASVQRF*SRDCCL
Trigger: CAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGA...GGCCCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR CCA 90 bp TGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGTCACTCCGTCCAGAGATTCTaGAGCAGAGACTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: CQQLRPEILEQRLLPGGHSVQRF*SRDCCL
Trigger: CAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGA...GTGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR CCA 90 bp CACAAAGGGCTGTCAGCAGCTAGGGTGCCCGTGAGAGGTAGGACCACCTCAGGCCTCTCTGCCCTTGTGTaGAGAAAAGCCCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: HKGLSAARVPVRGRTTSGLSALV*RKALPF
Trigger: GAAGGGAAGGGCTTTTCTCCACACAAGGGCAGAGAG...GCCTGAGGTGGTCCTACCTCTCACGGGCACCCTAGCTGCTGACAGCCCTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR TCA 90 bp TGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGTCACGAGAGAGGAATTGGCTaGGGCATCAGAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: CQQLRPEILEQRLLPGGHERGIG*GIRRKA
Trigger: GGCTTTCCTTCTGATGCCTCAGCCAATTCCTCTCTC...GTGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR TCA 90 bp AGAAGCTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAATGTGTGCAGGCTCTTaGCCCCAGTGCTTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: RSCQQLRPEILEQRLLPGMCAGS*PQCLPL
Trigger: TAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACAT...TCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR TCA 90 bp GTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATCCTGGAGGTCACAGATaGATCTTGGGGTGGCCGATG +
Preference number: 4 (lower is better)
Translates to: VLALTPATRRGQNQNAINPGGHR*ILGWPM
Trigger: CATCGGCCACCCCAAGATTCATCTGTGACCTCCAGG...ATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR TCA 90 bp CTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGTCAGCAGGGATGCTGGAATaGCAGGTAGAGGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: LPAAPSRDSGAETAAWRSAGMLE*QVEVRT
Trigger: TGTTCTCACCTCTACCTGTCATTCCAGCATCCCTGC...TGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR GCA 90 bp TGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGACACGGAACTCTGGTTaGTGTTTTCGTCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: CVQALDPSACPYPSNAARTRNSG*CFRPGI
Trigger: AATTCCAGGACGAAAACAGCAACCAGAGTTCCGTGT...CCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000455335.2
CDS-3UTR GCA 90 bp CTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGGAAGTCGGAGGTGTGTaGTGGGCTCAGGGACTCACT +
Preference number: 4 (lower is better)
Translates to: LTPATRRGQNQNAINRGREVGGV*WAQGLT
Trigger: AGTGAGTCCCTGAGCCCAGCACACACCTCCGACTTC...CCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR GCA 90 bp GAGCAAGTAGACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTTTCTGACGCCGTCTaGGGCACTGTGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: EQVDTGARVRKMMLQPQVLSDAV*GTVGWS
Trigger: GGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAG...GACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTCTACTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR GCA 90 bp AAGCTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGTTCTGGAGCAGAGACTaGTGCCTGGAGGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: KLPAAPSRDSGAETAAWRFWSRD*CLEVTD
Trigger: ATCTGTGACCTCCAGGCAGCAGTCTCTGCTCCAGAA...CCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAGCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR GCA 90 bp AGACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTACGCCATCTTCTCGCAGAAGCTaGCAGCAGCTCCGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: RHRCQGQEDDATAPSPTPSSRRS*QQLRPE
Trigger: CTCTGGACGGAGCTGCTGGCAGCTTCTGCGAGAAGA...TGGCGTAGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR CCA 90 bp GTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCGAAGGAGAGAGGAATTaGCTGAGGCATCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: VLRQPSSPEGSCVQALDPEGERN*LRHQKE
Trigger: TTCCTTCTGATGCCTCAGCCAATTCCTCTCTCCTTC...GGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000455335.2
CDS-3UTR CCA 90 bp TACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGTCAGACACGGAACTCTaGTTGCTGTTTTCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: YASLPARKAHVCRLLTPVSDTEL*LLFSSW
Trigger: CCAGGACGAAAACAGCAACCAGAGTTCCGTGTCTGA...CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000455335.2
CDS-3UTR CCA 90 bp GCAAGTAGACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTCCGTCTGCGGCACTGTaGGTTGGTCCACACAGAAGC +
Preference number: 4 (lower is better)
Translates to: ASRHRCQGQEDDATAPSPPSAAL*VGPHRS
Trigger: GCTTCTGTGTGGACCAACCCACAGTGCCGCAGACGG...AGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTCTACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR CCA 90 bp GACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTACGCCAGGTCACAGATGAATCTTaGGGTGGCCGATGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DTGARVRKMMLQPQVLRQVTDES*GGRCSS
Trigger: GCTGGAGCATCGGCCACCCCAAGATTCATCTGTGAC...CTGGCGTAGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR CCA 90 bp AGAAGCTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGTCACAGATGAATCTTaGGGTGGCCGATGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RSCQQLRPEILEQRLLPGVTDES*GGRCSS
Trigger: GCTGGAGCATCGGCCACCCCAAGATTCATCTGTGAC...TCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR TCA 90 bp GCTGCTGTCCACCTTAAGCTGATAGACGTCAGACACGGAACTCTGGTTGCTGTTCAGGGGCGGGGCACCTaGGTCTTCCTCTTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: AAVHLKLIDVRHGTLVAVQGRGT*VFLFLN
Trigger: GTTGAGGAAGAGGAAGACTCAGGTGCCCCGCCCCTG...AACAGCAACCAGAGTTCCGTGTCTGACGTCTATCAGCTTAAGGTGGACAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448175.5
CDS-3UTR TCA 90 bp GAGCAAGTAGACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCATGGTGCTAGCTTTCTaGCGCCGTCTGCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: EQVDTGARVRKMMLQPQVMVLAF*RRLRHC
Trigger: ACAGTGCCGCAGACGGCGTCAGAAAGCTAGCACCAT...GACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTCTACTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR TCA 90 bp AGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAAATGTGTGCAGGCTCTTaGCCCCAGTGCTTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: SACPYPSNAARPEPECNKMCAGS*PQCLPL
Trigger: TAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACAT...TTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR TCA 90 bp GCAAGTAGACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTTGCTGGGGCAGTTTGTaGCAAGAGGCAGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: ASRHRCQGQEDDATAPSPCWGSL*QEAGML
Trigger: CAGCATCCCTGCCTCTTGTCACAAACTGCCCCAGCA...AGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTCTACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR TCA 90 bp CAGAAGCTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGGAGCTTTCTAGAAACTaGGCTGAAGGGGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: QKLPAAPSRDSGAETAAWELSRN*AEGVLW
Trigger: CCACAGTACCCCTTCAGCTCAGTTTCTAGAAAGCTC...CCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAGCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR GCA 90 bp CGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTACTTTTCTTTCTCCTTaGTGTCTGTCACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: RQPSSPEGSCVQALDPSATFLSP*CLSQEP
Trigger: GGGTTCCTGTGACAGACAGCAAGGAGAAAGAAAAGT...AGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000455335.2
CDS-3UTR GCA 90 bp CAGAAGCTGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGGCAAGTAGACACAGGTaGCAGGGTCAGGAAGATGAT +
Preference number: 4 (lower is better)
Translates to: QKLPAAPSRDSGAETAAWASRHR*QGQEDD
Trigger: ATCATCTTCCTGACCCTGGCACCTGTGTCTACTTGC...CCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCAGCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR GCA 90 bp TGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGTCACCTGTTTTCGTCTCCTTaGTGTCTGTCACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: CQQLRPEILEQRLLPGGHLFSSP*CLSQEP
Trigger: GGGTTCCTGTGACAGACAGCAAGGAGACGAAAACAG...GTGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454871.5
CDS-3UTR CCA 90 bp CACAAAGGGCTGTCAGCAGCTAGGGTGCCCGTGAGAGGTAGGACCACCTCAGGCGAAGGAGAGAGGAATTaGCTGAGGCATCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: HKGLSAARVPVRGRTTSGEGERN*LRHQKE
Trigger: TTCCTTCTGATGCCTCAGCCAATTCCTCTCTCCTTC...GCCTGAGGTGGTCCTACCTCTCACGGGCACCCTAGCTGCTGACAGCCCTTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR CCA 90 bp GGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGAAGGAGAGAGGAATTaGCTGAGGCATCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GSCVQALDPSACPYPSNAEGERN*LRHQKE
Trigger: TTCCTTCTGATGCCTCAGCCAATTCCTCTCTCCTTC...CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000455335.2
CDS-3UTR CCA 90 bp TGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGTTGCTGTTTTCGTCCTaGAATTCAAGAAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: CVQALDPSACPYPSNAARLLFSS*NSRRRE
Trigger: CTCTCTCCTTCTTGAATTCCAGGACGAAAACAGCAA...CCGCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000455335.2
CDS-3UTR CCA 90 bp GGTTCTTCCTTGGTGAGGGTAGGAGGTTCATCAGCAACTTCCGAGGAGGGCAGGGTCACAGATGAATCTTaGGGTGGCCGATGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GSSLVRVGGSSATSEEGRVTDES*GGRCSS
Trigger: GCTGGAGCATCGGCCACCCCAAGATTCATCTGTGAC...CCTGCCCTCCTCGGAAGTTGCTGATGAACCTCCTACCCTCACCAAGGAAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454871.5
CDS-3UTR CCA 90 bp GGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTACGCCAGCCTTCCGCAGAGACTGCTGCCTaGAGGTCACAGATGAATCTT +
Preference number: 4 (lower is better)
Translates to: GARVRKMMLQPQVLRQPSAETAA*RSQMNL
Trigger: AAGATTCATCTGTGACCTCCAGGCAGCAGTCTCTGC...GGAAGGCTGGCGTAGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR CCA 90 bp CTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGTCCGTCCAGAGATTCTaGAGCAGAGACTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LTPATRRGQNQNAINRGRSVQRF*SRDCCL
Trigger: CAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGA...CCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR CCA 90 bp AGACATGAGCGCTCCTCTTCTCGGGAGCAAGTAGACACAGGTGCCAGGGTCAGGAGGCATGGGCAGAGCTaGCAGGACAGCAAGAAATCT +
Preference number: 4 (lower is better)
Translates to: RHERSSSREQVDTGARVRRHGQS*QDSKKS
Trigger: AGATTTCTTGCTGTCCTGCCAGCTCTGCCCATGCCT...CCTGACCCTGGCACCTGTGTCTACTTGCTCCCGAGAAGAGGAGCGCTCATGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR CCA 90 bp CTTCCCTTCCCTCCAATGTCTCTACCCAGTCCTCCAACAGCAGCCTACAGGGCCGGGTACTGTGGGGGATaGGTACTGTTGTCAGAACCT +
Preference number: 4 (lower is better)
Translates to: LPFPPMSLPSPPTAAYRAGYCGG*VLLSEP
Trigger: AGGTTCTGACAACAGTACCCATCCCCCACAGTACCC...GGCCCTGTAGGCTGCTGTTGGAGGACTGGGTAGAGACATTGGAGGGAAGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR CCA 90 bp GGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGTCAGACACGGAACTCTaGTTGCTGTTTTCGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSCVQALDPSACPYPSNASDTEL*LLFSSP
Trigger: AGGAGACGAAAACAGCAACCAGAGTTCCGTGTCTGA...CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454871.5
CDS-3UTR TCA 90 bp CAAGTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCAAGTTCAAGTAACCTaGGGCACGCTCTCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: QVLRQPSSPEGSCVQALDQVQVT*GTLSSR
Trigger: TCTAGAAGAGAGCGTGCCTCAGGTTACTTGAACTTG...GTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR GCA 90 bp GCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGACTTTTCTTTCTCCTTaGTGTCTGTCACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: AHVCRLLTPVLALTPATRTFLSP*CLSQEP
Trigger: GGGTTCCTGTGACAGACAGCAAGGAGAAAGAAAAGT...CCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000455335.2
CDS-3UTR GCA 90 bp TGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGTCACACACGGAACTCTGGTTaGTGTTTTCGTCTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: CQQLRPEILEQRLLPGGHTRNSG*CFRLLA
Trigger: AGCAAGGAGACGAAAACAGCAACCAGAGTTCCGTGT...GTGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454871.5
CDS-3UTR CCA 90 bp TCAACGACCTGTGTCTCTAGTGGAACTGGTTCTTCCTTGGTGAGGGTAGGAGGTCCGTCTGCGGCACTGTaGGTTGGTCCACACAGAAGC +
Preference number: 4 (lower is better)
Translates to: STTCVSSGTGSSLVRVGGPSAAL*VGPHRS
Trigger: GCTTCTGTGTGGACCAACCCACAGTGCCGCAGACGG...ACCTCCTACCCTCACCAAGGAAGAACCAGTTCCACTAGAGACACAGGTCGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR CCA 90 bp CTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGGGGTACTGTGGGGGATaGGTACTGTTGTCAGAACCT +
Preference number: 4 (lower is better)
Translates to: LTPATRRGQNQNAINRGRGYCGG*VLLSEP
Trigger: AGGTTCTGACAACAGTACCCATCCCCCACAGTACCC...CCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR TCA 90 bp GTTGGTGCTGCTGTCCACCTTAAGCTGATAGACGTCAGACACGGAACTCTGGTTATGGTGCTAGCTTTCTaGCGCCGTCTGCGGCACTGT +
Preference number: 4 (lower is better)
Translates to: VGAAVHLKLIDVRHGTLVMVLAF*RRLRHC
Trigger: ACAGTGCCGCAGACGGCGTCAGAAAGCTAGCACCAT...AACCAGAGTTCCGTGTCTGACGTCTATCAGCTTAAGGTGGACAGCAGCACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448175.5
CDS-3UTR GCA 90 bp CAAGTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACACTTTTCTTTCTCCTTaGTGTCTGTCACAGGAACCC +
Preference number: 4 (lower is better)
Translates to: QVLRQPSSPEGSCVQALDTFLSP*CLSQEP
Trigger: GGGTTCCTGTGACAGACAGCAAGGAGAAAGAAAAGT...GTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000455335.2
CDS-3UTR GCA 90 bp AGACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTACGCCAGCAAGTAGACACAGGTaGCAGGGTCAGGAAGATGAT +
Preference number: 4 (lower is better)
Translates to: RHRCQGQEDDATAPSPTPASRHR*QGQEDD
Trigger: ATCATCTTCCTGACCCTGGCACCTGTGTCTACTTGC...TGGCGTAGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000454871.5
CDS-3UTR CCA 90 bp GGGCAGTTTGTGACAAGAGGCAGGGATGCTGGAATGACAGGTAGAGGTGAGAACGGCAGGGAGGGCTCCTaGAATTCAAGAAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GQFVTRGRDAGMTGRGENGREGS*NSRRRE
Trigger: CTCTCTCCTTCTTGAATTCCAGGAGCCCTCCCTGCC...GTTCTCACCTCTACCTGTCATTCCAGCATCCCTGCCTCTTGTCACAAACTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411832.5
CDS-3UTR CCA 90 bp AACTGGTTCTTCCTTGGTGAGGGTAGGAGGTTCATCAGCAACTTCCGAGGAGGGTTGCTGTTTTCGTCTTaGGAGGTCAAGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: NWFFLGEGRRFISNFRGGLLFSS*EVKAGG
Trigger: TCCCCCAGCCTTGACCTCCCAAGACGAAAACAGCAA...CCCTCCTCGGAAGTTGCTGATGAACCTCCTACCCTCACCAAGGAAGAACCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448175.5
CDS-3UTR TCA 90 bp GCAAGTAGACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTCAAGTTCAAGTAACCTaGGGCACGCTCTCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: ASRHRCQGQEDDATAPSPQVQVT*GTLSSR
Trigger: TCTAGAAGAGAGCGTGCCTCAGGTTACTTGAACTTG...AGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTCTACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR GCA 90 bp TCAACGACCTGTGTCTCTAGTGGAACTGGTTCTTCCTTGGTGAGGGTAGGAGGTTTCTGGAGCAGAGACTaGTGCCTGGAGGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: STTCVSSGTGSSLVRVGGFWSRD*CLEVTD
Trigger: ATCTGTGACCTCCAGGCAGCAGTCTCTGCTCCAGAA...ACCTCCTACCCTCACCAAGGAAGAACCAGTTCCACTAGAGACACAGGTCGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454871.5
CDS-3UTR TCA 90 bp GACAGCAAGAAATCTAGACGGACTCTCTGCCCTTGTGTGGAGAAAAGCCCTTCCGAGCTTTCTAGAAACTaGGCTGAAGGGGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: DSKKSRRTLCPCVEKSPSELSRN*AEGVLW
Trigger: CCACAGTACCCCTTCAGCTCAGTTTCTAGAAAGCTC...GGAAGGGCTTTTCTCCACACAAGGGCAGAGAGTCCGTCTAGATTTCTTGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR CCA 90 bp GTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATTTGCTGTTTTCGTCCTaGAATTCAAGAAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: VLALTPATRRGQNQNAINLLFSS*NSRRRE
Trigger: CTCTCTCCTTCTTGAATTCCAGGACGAAAACAGCAA...ATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000455335.2
3UTR CAA 72 bp TCAACGACCTGTGTCTCTAGTGGAACTGGTTCTTCCTaGGTGAGGGTAGGAGGTTCATCAGCAACTTCCGAG +
Preference number: 4 (lower is better)
Translates to: STTCVSSGTGSS*VRVGGSSATSE
Trigger: CTCGGAAGTTGCTGATGAACCTCCTACCCTCACCAAGGAAGAACCAGTTCCACTAGAGACACAGGTCGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR CCA 90 bp GTTGGTGCTGCTGTCCACCTTAAGCTGATAGACGTCAGACACGGAACTCTGGTTTCAGACACGGAACTCTaGTTGCTGTTTTCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: VGAAVHLKLIDVRHGTLVSDTEL*LLFSSW
Trigger: CCAAGACGAAAACAGCAACCAGAGTTCCGTGTCTGA...AACCAGAGTTCCGTGTCTGACGTCTATCAGCTTAAGGTGGACAGCAGCACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448175.5
CDS-3UTR GCA 90 bp GGGGATGGGTACTGTTGTCAGAACCTCAAATTCTTGCTGGGGCAGTTTGTGACAACACGGAACTCTGGTTaGTGTTTTCGTCCTGGAATT +
Preference number: 4 (lower is better)
Translates to: GDGYCCQNLKFLLGQFVTTRNSG*CFRPGI
Trigger: AATTCCAGGACGAAAACAGCAACCAGAGTTCCGTGT...TGTCACAAACTGCCCCAGCAAGAATTTGAGGTTCTGACAACAGTACCCATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223368.7
CDS CCA 90 bp CTCGGCCAACCACGACTCACCCTCCAGGATCTCCTGGCCCAGCGTTaGGGGCTGGGAGTCATCCGTGCGGAAGTCGGAGGTGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LGQPRLTLQDLLAQR*GLGVIRAEVGGVCW
Trigger: CCAGCACACACCTCCGACTTCCGCACGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAGATCCTGGAGGGTGAGTCGTGGTTGGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493592.1
CDS-3UTR CAA 90 bp GCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGTCTCCTGGCCCAGCGTaGGGGGCTGGGAGTCATCCG +
Preference number: 5 (lower is better)
Translates to: AHVCRLLTPVLALTPATRSPGPA*GAGSHP
Trigger: CGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAGA...CCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223368.7
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS CCA 90 bp GGAAACTCATCCTCGGCCAACCACGACTCACCCTCCAGGATCTCCTaGCCCAGCGTTGGGGGCTGGGAGTCATCCGTGCGGAAGTCGGAG +
Preference number: 5 (lower is better)
Translates to: GNSSSANHDSPSRIS*PSVGGWESSVRKSE
Trigger: CTCCGACTTCCGCACGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAGATCCTGGAGGGTGAGTCGTGGTTGGCCGAGGATGAGTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493592.1
CDS-3UTR CAA 90 bp AGCGCTTCAGGGGCGGGGCACCTGAGTCTTCCTCTTCCTCAACGACCTGTGTCTTCTCCTGGCCCAGCGTaGGGGGCTGGGAGTCATCCG +
Preference number: 5 (lower is better)
Translates to: SASGAGHLSLPLPQRPVSSPGPA*GAGSHP
Trigger: CGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAGA...AGACACAGGTCGTTGAGGAAGAGGAAGACTCAGGTGCCCCGCCCCTGAAGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR CAA 90 bp TGCCAGCAGCTCCGTCCAGAGATTCTGGAGCAGAGACTGCTGCCTGGAGGTCACTCTCCTGGCCCAGCGTaGGGGGCTGGGAGTCATCCG +
Preference number: 5 (lower is better)
Translates to: CQQLRPEILEQRLLPGGHSPGPA*GAGSHP
Trigger: CGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAGA...GTGACCTCCAGGCAGCAGTCTCTGCTCCAGAATCTCTGGACGGAGCTGCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000454871.5
CDS-3UTR CAA 90 bp CTTCCCTTCCCTCCAATGTCTCTACCCAGTCCTCCAACAGCAGCCTACAGGGCCTCTCCTGGCCCAGCGTaGGGGGCTGGGAGTCATCCG +
Preference number: 5 (lower is better)
Translates to: LPFPPMSLPSPPTAAYRASPGPA*GAGSHP
Trigger: CGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAGA...GGCCCTGTAGGCTGCTGTTGGAGGACTGGGTAGAGACATTGGAGGGAAGGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000223368.7
CDS-3UTR CAA 90 bp CTGTGGGTTGGTCCACACAGAAGCGCTTCAGGGGCGGGGCACCTGAGTCTTCCTCTGCGGCACTGTGGGTaGGTCCACACAGAAGCGCTT +
Preference number: 5 (lower is better)
Translates to: LWVGPHRSASGAGHLSLPLRHCG*VHTEAL
Trigger: AAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCAG...AGGAAGACTCAGGTGCCCCGCCCCTGAAGCGCTTCTGTGTGGACCAACCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR CAA 90 bp GCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCACTGCGGCACTGTGGGTaGGTCCACACAGAAGCGCTT +
Preference number: 5 (lower is better)
Translates to: ARKAHVCRLLTPVLALTPLRHCG*VHTEAL
Trigger: AAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCAG...TGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CAA 90 bp TACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGTGCAGTGAGCCGAGATaGCGCCAATGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: YASLPARKAHVCRLLTPVCSEPR*RQCTPA
Trigger: GGCTGGAGTGCATTGGCGCAATCTCGGCTCACTGCA...CACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455335.2
CDS-3UTR CAA 90 bp CAAGTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCTGCGGCACTGTGGGTaGGTCCACACAGAAGCGCTT +
Preference number: 5 (lower is better)
Translates to: QVLRQPSSPEGSCVQALDLRHCG*VHTEAL
Trigger: AAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCAG...GTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CAA 90 bp GGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGTTGCTGTTTTCGTCTaGGGAGGTCAAGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GSCVQALDPSACPYPSNAVAVFV*GGQGWG
Trigger: CCCCCAGCCTTGACCTCCCAAGACGAAAACAGCAAC...CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448175.5
CDS-3UTR CAA 90 bp CATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCGGAACTGGTTCTTCCTaGGTGAGGGTAGGAGGTTCA +
Preference number: 5 (lower is better)
Translates to: HVCRLLTPVLALTPATRRGTGSS*VRVGGS
Trigger: TGAACCTCCTACCCTCACCAAGGAAGAACCAGTTCC...GCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CAA 90 bp AGGGCCCCCAGTCCTAGGGGAAAGTCCGGGAGTCTACAGTCTCCGTTCAAGTTCCTGCGGCACTGTGGGTaGGTCCACACAGAAGCGCTT +
Preference number: 5 (lower is better)
Translates to: RAPSPRGKSGSLQSPFKFLRHCG*VHTEAL
Trigger: AAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCAG...GAACTTGAACGGAGACTGTAGACTCCCGGACTTTCCCCTAGGACTGGGGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR CAA 90 bp CAAGTCCTACGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCATGTGTGCAGGCTCTaGACCCCAGTGCTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: QVLRQPSSPEGSCVQALDHVCRL*TPVLAL
Trigger: AAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATG...GTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCGTAGGACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CAA 90 bp GCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAACGGACTCTCTGCCCTaGTGTGGAGAAAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: ARKAHVCRLLTPVLALTPTDSLP*CGEKPF
Trigger: GAAGGGCTTTTCTCCACACAAGGGCAGAGAGTCCGT...TGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR CAA 90 bp CATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGGCGCAGACTCTGTCTCTCCTaGCTGTCTGTCACAGGAACC +
Preference number: 5 (lower is better)
Translates to: HVCRLLTPVLALTPATRRRLCLS*LSVTGT
Trigger: GGTTCCTGTGACAGACAGCAAGGAGAGACAGAGTCT...GCGCCGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448175.5
CDS-3UTR CAA 90 bp AGCTTTCTGACGCCGTCTGCGGCACTGTGGGTTGGTCCACACAGAAGCGCTTCAAGGCTGGGGGACTGCTaGAGGCCAGGAGTTCACAAC +
Preference number: 5 (lower is better)
Translates to: SFLTPSAALWVGPHRSASRLGDC*RPGVHN
Trigger: GTTGTGAACTCCTGGCCTCAAGCAGTCCCCCAGCCT...TGAAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCAGACGGCGTCAGAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448175.5
CDS-3UTR CAA 90 bp CAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCGGAACTGGTTCTTCCTaGGTGAGGGTAGGAGGTTCA +
Preference number: 5 (lower is better)
Translates to: QPSSPEGSCVQALDPSACGTGSS*VRVGGS
Trigger: TGAACCTCCTACCCTCACCAAGGAAGAACCAGTTCC...GCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CAA 90 bp CTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGCTGCGGCACTGTGGGTaGGTCCACACAGAAGCGCTT +
Preference number: 5 (lower is better)
Translates to: LTPATRRGQNQNAINRGRLRHCG*VHTEAL
Trigger: AAGCGCTTCTGTGTGGACCAACCCACAGTGCCGCAG...CCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CAA 90 bp CCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCGCTGTTTTCGTCTCCTaGCTGTCTGTCACAGGAACC +
Preference number: 5 (lower is better)
Translates to: PEGSCVQALDPSACPYPSAVFVS*LSVTGT
Trigger: GGTTCCTGTGACAGACAGCAAGGAGACGAAAACAGC...GCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454871.5
CDS-3UTR CAA 90 bp CGCCAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTGACTTTTCTTTCTCCTaGCTGTCTGTCACAGGAACC +
Preference number: 5 (lower is better)
Translates to: RQPSSPEGSCVQALDPSADFSFS*LSVTGT
Trigger: GGTTCCTGTGACAGACAGCAAGGAGAAAGAAAAGTC...AGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000455335.2
CDS-3UTR CAA 90 bp CCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGGCCAGGGGAACTGGTTCTTCCTaGGTGAGGGTAGGAGGTTCA +
Preference number: 5 (lower is better)
Translates to: PATRRGQNQNAINRGRARGTGSS*VRVGGS
Trigger: TGAACCTCCTACCCTCACCAAGGAAGAACCAGTTCC...CCTGGCCCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CAA 90 bp AGCGCTTCAGGGGCGGGGCACCTGAGTCTTCCTCTTCCTCAACGACCTGTGTCTGGAACTGGTTCTTCCTaGGTGAGGGTAGGAGGTTCA +
Preference number: 5 (lower is better)
Translates to: SASGAGHLSLPLPQRPVSGTGSS*VRVGGS
Trigger: TGAACCTCCTACCCTCACCAAGGAAGAACCAGTTCC...AGACACAGGTCGTTGAGGAAGAGGAAGACTCAGGTGCCCCGCCCCTGAAGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR CAA 90 bp GTGCTTGCCCTTACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATCATGTGTGCAGGCTCTaGACCCCAGTGCTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: VLALTPATRRGQNQNAINHVCRL*TPVLAL
Trigger: AAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATG...ATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGTAAGGGCAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000448175.5
ENST00000454871.5
ENST00000455335.2
CDS-3UTR CAA 90 bp CTTGGTGAGGGTAGGAGGTTCATCAGCAACTTCCGAGGAGGGCAGGGAGGGCTCGACACGGAACTCTGGTaGCTGTTTTCGTCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: LGEGRRFISNFRGGQGGLDTELW*LFSSPC
Trigger: GCAAGGAGACGAAAACAGCAACCAGAGTTCCGTGTC...GAGCCCTCCCTGCCCTCCTCGGAAGTTGCTGATGAACCTCCTACCCTCACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454871.5
CDS TCA 90 bp AGAGCTGTGTGGAGGTGGCTTGGTGAGGAGGGGAGAATACTGGCCTaGGAAGCAAACATTCATTCAGGGCCCAGCTGGACCAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: RAVWRWLGEEGRILA*EANIHSGPSWTRSQ
Trigger: CTGTGACCTGGTCCAGCTGGGCCCTGAATGAATGTTTGCTTCTCAGGCCAGTATTCTCCCCTCCTCACCAAGCCACCTCCACACAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486818.5
CDS CCA 90 bp TTCTTCTCCCCAACTTCAACGCCTGAATACGCAGAGCGCTCAGCCTaGCGGGCTGACACCACTCCAGGGCTACTCGCTATTATCAAGAGG +
Preference number: 5 (lower is better)
Translates to: FFSPTSTPEYAERSA*RADTTPGLLAIIKR
Trigger: CCTCTTGATAATAGCGAGTAGCCCTGGAGTGGTGTCAGCCCGCCAGGCTGAGCGCTCTGCGTATTCAGGCGTTGAAGTTGGGGAGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463858.5
ENST00000464288.5
ENST00000482231.5
CDS-3UTR CAA 90 bp CAGCCTTCCAGCCCGGAAGGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCGACTTTTCTTTCTCCTaGCTGTCTGTCACAGGAACC +
Preference number: 5 (lower is better)
Translates to: QPSSPEGSCVQALDPSACDFSFS*LSVTGT
Trigger: GGTTCCTGTGACAGACAGCAAGGAGAAAGAAAAGTC...GCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCCTTCCGGGCTGGAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000455335.2
CDS-3UTR CAA 90 bp AGACACAGGTGCCAGGGTCAGGAAGATGATGCTACAGCCCCAAGTCCTACGCCAACGGACTCTCTGCCCTaGTGTGGAGAAAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: RHRCQGQEDDATAPSPTPTDSLP*CGEKPF
Trigger: GAAGGGCTTTTCTCCACACAAGGGCAGAGAGTCCGT...TGGCGTAGGACTTGGGGCTGTAGCATCATCTTCCTGACCCTGGCACCTGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS GCA 90 bp CCAGGTCACAGCCAAGAATGGTGGAAGGGCAAAATACGGCTAGACTaGAGAGGGCCATCTCTGCTGGGCTGGAGATATCCTCCAGGATCT +
Preference number: 5 (lower is better)
Translates to: PGHSQEWWKGKIRLD*RGPSLLGWRYPPGS
Trigger: AGATCCTGGAGGATATCTCCAGCCCAGCAGAGATGGCCCTCTGCAGTCTAGCCGTATTTTGCCCTTCCACCATTCTTGGCTGTGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486818.5
CDS CCA 90 bp ACATTCATTCAGGGCCCAGCTGGACCAGGTCACAGCCAAGAATGGTaGAAGGGCAAAATACGGCTAGACTGCAGAGGGCCATCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: TFIQGPAGPGHSQEW*KGKIRLDCRGPSLL
Trigger: CAGCAGAGATGGCCCTCTGCAGTCTAGCCGTATTTTGCCCTTCCACCATTCTTGGCTGTGACCTGGTCCAGCTGGGCCCTGAATGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486818.5
CDS CCA 90 bp AAAATGACATTTGTCAGGCATCCTTGGGCATCTGAAGGAGGCTGGTaGTGTCTGAAGGTGGTGAGCTCAGGCTTCGGCTGCCGGACTGAC +
Preference number: 5 (lower is better)
Translates to: KMTFVRHPWASEGGW*CLKVVSSGFGCRTD
Trigger: GTCAGTCCGGCAGCCGAAGCCTGAGCTCACCACCTTCAGACACCACCAGCCTCCTTCAGATGCCCAAGGATGCCTGACAAATGTCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493671.5
CDS CCA 90 bp CAAACATTCATTCAGGGCCCAGCTGGACCAGGTCACAGCCAAGAATaGTGGAAGGGCAAAATACGGCTAGACTGCAGAGGGCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: QTFIQGPAGPGHSQE*WKGKIRLDCRGPSL
Trigger: CAGAGATGGCCCTCTGCAGTCTAGCCGTATTTTGCCCTTCCACCATTCTTGGCTGTGACCTGGTCCAGCTGGGCCCTGAATGAATGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486818.5
CDS-3UTR CAA 90 bp CTTCCCTTCCCTCCAATGTCTCTACCCAGTCCTCCAACAGCAGCCTACAGGGCCGACTTTTCTTTCTCCTaGCTGTCTGTCACAGGAACC +
Preference number: 5 (lower is better)
Translates to: LPFPPMSLPSPPTAAYRADFSFS*LSVTGT
Trigger: GGTTCCTGTGACAGACAGCAAGGAGAAAGAAAAGTC...GGCCCTGTAGGCTGCTGTTGGAGGACTGGGTAGAGACATTGGAGGGAAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR CAA 90 bp TCAACGACCTGTGTCTCTAGTGGAACTGGTTCTTCCTTGGTGAGGGTAGGAGGTCATGTGTGCAGGCTCTaGACCCCAGTGCTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: STTCVSSGTGSSLVRVGGHVCRL*TPVLAL
Trigger: AAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATG...ACCTCCTACCCTCACCAAGGAAGAACCAGTTCCACTAGAGACACAGGTCGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448175.5
ENST00000454871.5
CDS-3UTR CAA 90 bp GGCTCATGTGTGCAGGCTCTTGACCCCAGTGCTTGCCCTTACCCCAGCAACGCGCTGAACTGTTCGATTTaGACTTTTCTTTCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: GSCVQALDPSACPYPSNALNCSI*TFLSPC
Trigger: GCAAGGAGAAAGAAAAGTCAAAATCGAACAGTTCAG...CGCGTTGCTGGGGTAAGGGCAAGCACTGGGGTCAAGAGCCTGCACACATGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000455335.2
CDS GCA 90 bp TTCCTAAGCTATCGAGAAAGGGCTTGGTGCTGCCTGGCTCTGAGGTaGTCTCTCGAGCCTGTTACTCTAAAGACGAGACACAACAAGAGC +
Preference number: 5 (lower is better)
Translates to: FLSYRERAWCCLALR*SLEPVTLKTRHNKS
Trigger: GCTCTTGTTGTGTCTCGTCTTTAGAGTAACAGGCTCGAGAGAGCACCTCAGAGCCAGGCAGCACCAAGCCCTTTCTCGATAGCTTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493592.1
CDS-3UTR CAA 90 bp CCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGGCCAGGCTGAACTGTTCGATTTaGACTTTTCTTTCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: PATRRGQNQNAINRGRARLNCSI*TFLSPC
Trigger: GCAAGGAGAAAGAAAAGTCAAAATCGAACAGTTCAG...CCTGGCCCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223368.7
ENST00000411832.5
ENST00000455335.2
CDS-3UTR CAA 90 bp ACCCCAGCAACGCGGCGCGGCCAGAACCAGAATGCAATAAATAGAGGCAGGGCCTGTCTTCACTCACTGTaGCCCATTTCCATTTTCTTA +
Preference number: 5 (lower is better)
Translates to: TPATRRGQNQNAINRGRACLHSL*PISIFL
Trigger: TAAGAAAATGGAAATGGGCAACAGTGAGTGAAGACA...GGCCCTGCCTCTATTTATTGCATTCTGGTTCTGGCCGCGCCGCGTTGCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR CAA 90 bp GGGGATGGGTACTGTTGTCAGAACCTCAAATTCTTGCTGGGGCAGTTTGTGACAGGAACTGGTTCTTCCTaGGTGAGGGTAGGAGGTTCA +
Preference number: 5 (lower is better)
Translates to: GDGYCCQNLKFLLGQFVTGTGSS*VRVGGS
Trigger: TGAACCTCCTACCCTCACCAAGGAAGAACCAGTTCC...TGTCACAAACTGCCCCAGCAAGAATTTGAGGTTCTGACAACAGTACCCATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS-3UTR CAA 90 bp ACAGGGCCCCCAGTCCTAGGGGAAAGTCCGGGAGTCTACAGTCTCCGTTCAAGTTGTCTTCACTCACTGTaGCCCATTTCCATTTTCTTA +
Preference number: 5 (lower is better)
Translates to: TGPPVLGESPGVYSLRSSCLHSL*PISIFL
Trigger: TAAGAAAATGGAAATGGGCAACAGTGAGTGAAGACA...ACTTGAACGGAGACTGTAGACTCCCGGACTTTCCCCTAGGACTGGGGGCCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000223368.7
ENST00000411832.5
CDS TCA 90 bp ATAAGATGTGTAGAAAATGACATTTGTCAGGCATCCTTGGGCATCTaGAGGAGGCTGGTGGTGTCTGAAGGTGGTGAGCTCAGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: IRCVENDICQASLGI*RRLVVSEGGELRLR
Trigger: CCGAAGCCTGAGCTCACCACCTTCAGACACCACCAGCCTCCTTCAGATGCCCAAGGATGCCTGACAAATGTCATTTTCTACACATCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493671.5
CDS CCA 90 bp CGACAGCAGCGTGAGAATCCAAGGACCCAAGGAAGAACAGAATCCTaGACAAGCAACTTCTCCTCAAGCCTCAGAAAAATGAACCCTTCC +
Preference number: 5 (lower is better)
Translates to: RQQRENPRTQGRTES*TSNFSSSLRKMNPS
Trigger: GGAAGGGTTCATTTTTCTGAGGCTTGAGGAGAAGTTGCTTGTCCAGGATTCTGTTCTTCCTTGGGTCCTTGGATTCTCACGCTGCTGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481667.1
CDS CCA 90 bp CGTGGTCATTTTCCTCAAGAGGAACTCTGGACAGAGCCAAGGGCCTaGCATCACTTTAGGCAGCCAAGGATACAACTGAGTATAATAATC +
Preference number: 5 (lower is better)
Translates to: RGHFPQEELWTEPRA*HHFRQPRIQLSIII
Trigger: GATTATTATACTCAGTTGTATCCTTGGCTGCCTAAAGTGATGCCAGGCCCTTGGCTCTGTCCAGAGTTCCTCTTGAGGAAAATGACCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493671.5
CDS CAA 90 bp CCTCGGCCAACCACGACTCACCCTCCAGGATCTCCTGGCCCAGCGTaGGGGGCTGGGAGTCATCCGTGCGGAAGTCGGAGGTGTGTGCTG +
Preference number: 6 (lower is better)
Translates to: PRPTTTHPPGSPGPA*GAGSHPCGSRRCVL
Trigger: CAGCACACACCTCCGACTTCCGCACGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAGATCCTGGAGGGTGAGTCGTGGTTGGCCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493592.1
CDS CAA 72 bp GGCTGGAGATATCCTCCAGGATCTCCTGGCCCAGCGTaGGGGGCTGGGAGTCATCCGTGCGGAAGTCGGAGG +
Preference number: 6 (lower is better)
Translates to: GWRYPPGSPGPA*GAGSHPCGSRR
Trigger: CCTCCGACTTCCGCACGGATGACTCCCAGCCCCCAACGCTGGGCCAGGAGATCCTGGAGGATATCTCCAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486818.5
CDS GCA 72 bp TGGTGGTGTCTGAAGGTGGTGAGCTCAGGCTTCGGCTaGCGGACTGACGGATTAGCACCTGGGAGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: WWCLKVVSSGFG*RTDGLAPGSSA
Trigger: GGCAGAACTCCCAGGTGCTAATCCGTCAGTCCGGCAGCCGAAGCCTGAGCTCACCACCTTCAGACACCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493671.5
CDS TCA 72 bp TCTGAAGGTGGTGAGCTCAGGCTTCGGCTGCCGGACTaGCGGATTAGCACCTGGGAGTTCTGCCTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: SEGGELRLRLPD*RISTWEFCLKA
Trigger: AGCCTTCAGGCAGAACTCCCAGGTGCTAATCCGTCAGTCCGGCAGCCGAAGCCTGAGCTCACCACCTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493671.5
CDS CCA 72 bp CCAACTTCAACGCCTGAATACGCAGAGCGCTCAGCCTaGCGGGCTGACACCACTCCAGGGCTACTCGCTATT +
Preference number: 6 (lower is better)
Translates to: PTSTPEYAERSA*RADTTPGLLAI
Trigger: AATAGCGAGTAGCCCTGGAGTGGTGTCAGCCCGCCAGGCTGAGCGCTCTGCGTATTCAGGCGTTGAAGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463858.5
ENST00000464288.5
ENST00000482231.5
ENST00000493592.1
CDS CCA 72 bp CAGGGCCCAGCTGGACCAGGTCACAGCCAAGAATGGTaGAAGGGCAAAATACGGCTAGACTGCAGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: QGPAGPGHSQEW*KGKIRLDCRGP
Trigger: TGGCCCTCTGCAGTCTAGCCGTATTTTGCCCTTCCACCATTCTTGGCTGTGACCTGGTCCAGCTGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486818.5
CDS CCA 72 bp TTTGTCAGGCATCCTTGGGCATCTGAAGGAGGCTGGTaGTGTCTGAAGGTGGTGAGCTCAGGCTTCGGCTGC +
Preference number: 6 (lower is better)
Translates to: FVRHPWASEGGW*CLKVVSSGFGC
Trigger: GCAGCCGAAGCCTGAGCTCACCACCTTCAGACACCACCAGCCTCCTTCAGATGCCCAAGGATGCCTGACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493671.5
CDS CAA 72 bp CCTGGGGGAGCTTCCTTAGAGCTGTGTGGAGGTGGCTaGGTGAGGAGGGGAGAATACTGGCCTGAGAAGCAA +
Preference number: 6 (lower is better)
Translates to: PGGASLELCGGG*VRRGEYWPEKQ
Trigger: TTGCTTCTCAGGCCAGTATTCTCCCCTCCTCACCAAGCCACCTCCACACAGCTCTAAGGAAGCTCCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486818.5
CDS CCA 72 bp ACATTTGTCAGGCATCCTTGGGCATCTGAAGGAGGCTaGTGGTGTCTGAAGGTGGTGAGCTCAGGCTTCGGC +
Preference number: 6 (lower is better)
Translates to: TFVRHPWASEGG*WCLKVVSSGFG
Trigger: GCCGAAGCCTGAGCTCACCACCTTCAGACACCACCAGCCTCCTTCAGATGCCCAAGGATGCCTGACAAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493671.5
CDS CAA 90 bp AGGCCTGGACCTGGGGGAGCTTCCTTAGAGCTGTGTGGAGGTGGCTaGGTGAGGAGGGGAGAATACTGGCCTGAGAAGCAAACATTCATT +
Preference number: 6 (lower is better)
Translates to: RPGPGGASLELCGGG*VRRGEYWPEKQTFI
Trigger: AATGAATGTTTGCTTCTCAGGCCAGTATTCTCCCCTCCTCACCAAGCCACCTCCACACAGCTCTAAGGAAGCTCCCCCAGGTCCAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486818.5
CDS CCA 72 bp GCAGCTGAGCGTGGTCATTTTCCTCAAGAGGAACTCTaGACAGAGCCAAGGGCCTGGCATCACTTTAGGCAG +
Preference number: 6 (lower is better)
Translates to: AAERGHFPQEEL*TEPRAWHHFRQ
Trigger: CTGCCTAAAGTGATGCCAGGCCCTTGGCTCTGTCCAGAGTTCCTCTTGAGGAAAATGACCACGCTCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493671.5
CDS GCA 72 bp TATCGAGAAAGGGCTTGGTGCTGCCTGGCTCTGAGGTaGTCTCTCGAGCCTGTTACTCTAAAGACGAGACAC +
Preference number: 6 (lower is better)
Translates to: YRERAWCCLALR*SLEPVTLKTRH
Trigger: GTGTCTCGTCTTTAGAGTAACAGGCTCGAGAGAGCACCTCAGAGCCAGGCAGCACCAAGCCCTTTCTCGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493592.1
CDS TCA 72 bp GGGCTCCTGGAATTCAAGAAGGAGAGAGGAATTGGCTaGGGCATCAGAAGGAAAGCCATTAGGTTCTCGGGC +
Preference number: 6 (lower is better)
Translates to: GLLEFKKERGIG*GIRRKAIRFSG
Trigger: GCCCGAGAACCTAATGGCTTTCCTTCTGATGCCTCAGCCAATTCCTCTCTCCTTCTTGAATTCCAGGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411832.5
ENST00000463858.5
CDS CCA 72 bp TTTCCTCAAGAGGAACTCTGGACAGAGCCAAGGGCCTaGCATCACTTTAGGCAGCCAAGGATACAACTGAGT +
Preference number: 6 (lower is better)
Translates to: FPQEELWTEPRA*HHFRQPRIQLS
Trigger: ACTCAGTTGTATCCTTGGCTGCCTAAAGTGATGCCAGGCCCTTGGCTCTGTCCAGAGTTCCTCTTGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493671.5
CDS CAA 90 bp CTCTGGTTGCTGTTTTCGTCCTGGAATTCAAGAAGGAGAGAGGAATaGGCTGAGGCATCAGAAGGAAAGCCATTAGGTTCTCGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: LWLLFSSWNSRRREE*AEASEGKPLGSRAA
Trigger: AGCAGCCCGAGAACCTAATGGCTTTCCTTCTGATGCCTCAGCCAATTCCTCTCTCCTTCTTGAATTCCAGGACGAAAACAGCAACCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000455335.2
ENST00000481667.1
ENST00000482231.5
ENST00000493592.1
CDS TCA 72 bp TTCGTCCTGGAATTCAAGAAGGAGAGAGGAATTGGCTaGGGCATCAGAAGGAAAGCCATTAGGTTCTCGGGC +
Preference number: 6 (lower is better)
Translates to: FVLEFKKERGIG*GIRRKAIRFSG
Trigger: GCCCGAGAACCTAATGGCTTTCCTTCTGATGCCTCAGCCAATTCCTCTCTCCTTCTTGAATTCCAGGACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223368.7
ENST00000455335.2
ENST00000481667.1
ENST00000482231.5
ENST00000493592.1
CDS TCA 72 bp GACGTCAGACACGGAACTCTGGTTGCTGTTTTCGTCTaGAAACCAAACAGAACAAAGGCAGCAGCTGAGCGT +
Preference number: 6 (lower is better)
Translates to: DVRHGTLVAVFV*KPNRTKAAAER
Trigger: ACGCTCAGCTGCTGCCTTTGTTCTGTTTGGTTTTCAGACGAAAACAGCAACCAGAGTTCCGTGTCTGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493671.5