RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCL6B (Homo sapiens)

Ensembl gene IDs: ENSG00000161940

Ensembl transcript IDs: ENST00000293805.10, ENST00000537931.2, ENST00000571729.1, ENST00000572216.1, ENST00000573503.1, ENST00000576705.1

Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTCCCCCATGGAGCGATCAACTCAGTGCTAAGAACAGGCCCCCGTaGGAGGATGATGGACTCCACTTGAGCCCTGGTGGGTCTCTACCA +
Preference number: 1 (lower is better)
Translates to: SPPWSDQLSAKNRPP*EDDGLHLSPGGSLP
Trigger: TGGTAGAGACCCACCAGGGCTCAAGTGGAGTCCATCATCCTCCCACGGGGGCCTGTTCTTAGCACTGAGTTGATCGCTCCATGGGGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR GCA 90 bp TCCGCACCCAGCACACACACAGGACAGGGGAAAGGGTGGGAGAGATaGATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGGG +
Preference number: 1 (lower is better)
Translates to: SAPSTHTGQGKGWER*MHWTLDRFKIPLLG
Trigger: CCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTCCCACCCTTTCCCCTGTCCTGTGTGTGTGCTGGGTGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR CCA 90 bp GGACCCTGGATAGATTCAAGATACCCTTGCTGGGGGAGGGTGGGCTaGCCCGTTAGTTCTAACTCAGTCTTCTCAGTGCCACCTCCAGCC +
Preference number: 1 (lower is better)
Translates to: GPWIDSRYPCWGRVG*PVSSNSVFSVPPPA
Trigger: GGCTGGAGGTGGCACTGAGAAGACTGAGTTAGAACTAACGGGCCAGCCCACCCTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR TCA 90 bp TCAGTGCTAAGAACAGGCCCCCGTGGGAGGATGATGGACTCCACTTaGGCCCTGGTGGGTCTCTACCACTATAGATGGATACAGCAGAGC +
Preference number: 1 (lower is better)
Translates to: SVLRTGPRGRMMDST*ALVGLYHYRWIQQS
Trigger: GCTCTGCTGTATCCATCTATAGTGGTAGAGACCCACCAGGGCTCAAGTGGAGTCCATCATCCTCCCACGGGGGCCTGTTCTTAGCACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR GCA 90 bp GGGAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTaGTGGGGGAGGGTGGGCTGGCCCGTTAGTTCTAACTCAGTCTTC +
Preference number: 1 (lower is better)
Translates to: GRDACTGPWIDSRYP*WGRVGWPVSSNSVF
Trigger: GAAGACTGAGTTAGAACTAACGGGCCAGCCCACCCTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR TCA 90 bp ACAGAGGCAGATCTAGCCAGGATCTGCCACCCCTGCTCTCCCCAGTaGGAAATTAAGAGGGTGGCAATTTCTGATACCAAAGTGGCCTGG +
Preference number: 1 (lower is better)
Translates to: TEADLARICHPCSPQ*EIKRVAISDTKVAW
Trigger: CCAGGCCACTTTGGTATCAGAAATTGCCACCCTCTTAATTTCTCACTGGGGAGAGCAGGGGTGGCAGATCCTGGCTAGATCTGCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 90 bp CTCCCCAGTGAGAAATTAAGAGGGTGGCAATTTCTGATACCAAAGTaGCCTGGCACACCCCTATGCCCAAGCCTGATAGGGAAGCAAGGC +
Preference number: 1 (lower is better)
Translates to: LPSEKLRGWQFLIPK*PGTPLCPSLIGKQG
Trigger: GCCTTGCTTCCCTATCAGGCTTGGGCATAGGGGTGTGCCAGGCCACTTTGGTATCAGAAATTGCCACCCTCTTAATTTCTCACTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 90 bp AGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTaGGGGAGGGTGGGCTGGCCCGTTAGTTCTAACTCAGTCTTCTCA +
Preference number: 1 (lower is better)
Translates to: RDACTGPWIDSRYPC*GRVGWPVSSNSVFS
Trigger: TGAGAAGACTGAGTTAGAACTAACGGGCCAGCCCACCCTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR TCA 90 bp ATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTaGTACGGAATCCAGATACAGAATCCCCCACACCCACAGCCTCCA +
Preference number: 1 (lower is better)
Translates to: ILDHLAEKPASLHLE*YGIQIQNPPHPQPP
Trigger: TGGAGGCTGTGGGTGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR GCA 90 bp AGAGGGTTCCTGACCCAATTCCACAATCCCGCATGTTCCCAGAGCTaGCCTAGAACAAATAAAGGTTCCAGACCTAGAATTACAGGGGCA +
Preference number: 1 (lower is better)
Translates to: RGFLTQFHNPACSQS*PRTNKGSRPRITGA
Trigger: TGCCCCTGTAATTCTAGGTCTGGAACCTTTATTTGTTCTAGGGCAGCTCTGGGAACATGCGGGATTGTGGAATTGGGTCAGGAACCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 90 bp TTTAGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTaGAGTGATACGGAATCCAGATACAGAATCCCCCACACCCACAGC +
Preference number: 1 (lower is better)
Translates to: FRFWTILQKNLPAST*SDTESRYRIPHTHS
Trigger: GCTGTGGGTGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR TCA 90 bp CCGGTGCCACCCAAAGGCCTCAATAAATTATATTTACAGATAAACTaGATGCAATGGGGGCCACAGGTGGAGGGCTATTCCCTTAGGGAG +
Preference number: 1 (lower is better)
Translates to: PVPPKGLNKLYLQIN*MQWGPQVEGYSLRE
Trigger: CTCCCTAAGGGAATAGCCCTCCACCTGTGGCCCCCATTGCATTCAGTTTATCTGTAAATATAATTTATTGAGGCCTTTGGGTGGCACCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR TCA 90 bp TGGGCAGAGTCAGAAAAGGTCACATCATCTCTGATAAGGAATGTCTaGTCTCTCCCCCATGGAGCGATCAACTCAGTGCTAAGAACAGGC +
Preference number: 1 (lower is better)
Translates to: WAESEKVTSSLIRNV*SLPHGAINSVLRTG
Trigger: GCCTGTTCTTAGCACTGAGTTGATCGCTCCATGGGGGAGAGATCAGACATTCCTTATCAGAGATGATGTGACCTTTTCTGACTCTGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR GCA 90 bp ATAAAATACCCAAGCCAAACGAGAGAGCCAAGGGCTAGTAATCTCTaGCAGCAGAGCTGTGATCTCACCTTCTGTGTTTCTGGTCACTTT +
Preference number: 1 (lower is better)
Translates to: IKYPSQTREPRASNL*QQSCDLTFCVSGHF
Trigger: AAAGTGACCAGAAACACAGAAGGTGAGATCACAGCTCTGCTGGCAGAGATTACTAGCCCTTGGCTCTCTCGTTTGGCTTGGGTATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 90 bp CAGAGCCAAACCCAAGTGACCAGATTAATGGGACATTTTAGATTCTaGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGAT +
Preference number: 1 (lower is better)
Translates to: QSQTQVTRLMGHFRF*TILQKNLPASTWSD
Trigger: ATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCTAAAATGTCCCATTAATCTGGTCACTTGGGTTTGGCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 90 bp TTACCAAGCACCATCCCTTCTAGAGGAAAAGAAGGTTCTGGCATCTaGACACTTGCCAGAAGATGTCCAAAACCCACTAAAGGAAGAAGG +
Preference number: 1 (lower is better)
Translates to: LPSTIPSRGKEGSGI*TLARRCPKPTKGRR
Trigger: CCTTCTTCCTTTAGTGGGTTTTGGACATCTTCTGGCAAGTGTCCAGATGCCAGAACCTTCTTTTCCTCTAGAAGGGATGGTGCTTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 90 bp GAACCCCAGGTAACATTCAAACCCATATGCCTCTGTAGTAAAGGATaGGTTAACACTGTTTACCATCTAATCAAGCTAAAGAGTTTCATG +
Preference number: 1 (lower is better)
Translates to: EPQVTFKPICLCSKG*VNTVYHLIKLKSFM
Trigger: CATGAAACTCTTTAGCTTGATTAGATGGTAAACAGTGTTAACCCATCCTTTACTACAGAGGCATATGGGTTTGAATGTTACCTGGGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR TCA 90 bp AGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAAGCCCCCGTGGGAGGATaGTGGACTCCACTTGAGCCC +
Preference number: 2 (lower is better)
Translates to: SQEATLFLTFYLPGLHQKAPVGG*WTPLEP
Trigger: GGGCTCAAGTGGAGTCCATCATCCTCCCACGGGGGC...TTTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR GCA 90 bp CCACCCAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCCTGGCACACCCCTATaGCCAAGCCTGATAGGGAAG +
Preference number: 2 (lower is better)
Translates to: PPSQEATLFLTFYLPGLHPGTPL*PSLIGK
Trigger: CTTCCCTATCAGGCTTGGGCATAGGGGTGTGCCAGG...GTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR GCA 90 bp GGTGATGGAGGCATGTCGCCAGCATTAAGATCTCCAGCACAGATGCACGCCCCGTTCAGAGCAGCAGGATaGAGGTGGCTCCGGAGAAAC +
Preference number: 2 (lower is better)
Translates to: GDGGMSPALRSPAQMHAPFRAAG*RWLRRN
Trigger: GTTTCTCCGGAGCCACCTGCATCCTGCTGCTCTGAA...CGGGGCGTGCATCTGTGCTGGAGATCTTAATGCTGGCGACATGCCTCCATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR-3UTR CCA 90 bp CCACCCAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACAATGGGGGCCACAGGTaGAGGGCTATTCCCTTAGGG +
Preference number: 2 (lower is better)
Translates to: PPSQEATLFLTFYLPGLHNGGHR*RAIPLG
Trigger: CCCTAAGGGAATAGCCCTCCACCTGTGGCCCCCATT...GTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp ATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGGGGAGGGTGGGCTGCACCTCCAGCCCCTGTaGTCTTTACGGGACCCAACT +
Preference number: 2 (lower is better)
Translates to: MHWTLDRFKIPLLGEGGLHLQPL*SLRDPT
Trigger: AGTTGGGTCCCGTAAAGACCACAGGGGCTGGAGGTG...CAGCCCACCCTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR-3UTR GCA 90 bp AGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGAGCAAGGCCTGGGCCTaGAGCTTTCCCACCCGCAGG +
Preference number: 2 (lower is better)
Translates to: RFWTILQKNLPASTWSDTSKAWA*SFPTRR
Trigger: CCTGCGGGTGGGAAAGCTGCAGGCCCAGGCCTTGCT...CGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR TCA 90 bp CAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAGGAAATGCAATCGAATaGAGGCCCCGGTGCCACCCA +
Preference number: 2 (lower is better)
Translates to: QPRGNPVPHFLPTWPTPEGNAIE*RPRCHP
Trigger: TGGGTGGCACCGGGGCCTTCATTCGATTGCATTTCC...TTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR GCA 90 bp GCCCCTGTGGTCTTTACGGGACCCAACTCTTATCCATCTTCCTTGGTGATGGAGGATCTCCAGCACAGATaGACGCCCCGGCCTCTTGAT +
Preference number: 2 (lower is better)
Translates to: APVVFTGPNSYPSSLVMEDLQHR*TPRPLD
Trigger: ATCAAGAGGCCGGGGCGTGCATCTGTGCTGGAGATC...CTCCATCACCAAGGAAGATGGATAAGAGTTGGGTCCCGTAAAGACCACAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR-3UTR TCA 90 bp CCACCCAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACAGCCTCCACTTGGAGTaGTACGGAATCCAGATACAG +
Preference number: 2 (lower is better)
Translates to: PPSQEATLFLTFYLPGLHSLHLE*YGIQIQ
Trigger: CTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCT...GTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR TCA 90 bp AAAGAGGGAAGAGGGAGAAGAGTAGCTTTCTCACTAGTCCCCAGGCGACAGCCAATGATGGACTCCACTTaGGCCCTGGTGGGTCTCTAC +
Preference number: 2 (lower is better)
Translates to: KEGRGRRVAFSLVPRRQPMMDST*ALVGLY
Trigger: GTAGAGACCCACCAGGGCTCAAGTGGAGTCCATCAT...TGGCTGTCGCCTGGGGACTAGTGAGAAAGCTACTCTTCTCCCTCTTCCCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CAA 90 bp GCTAGCTCTCTCCTCAGAAACAATCTGGCTTGTGGGGAAGAGGTTTaGACCAGCAAAACAGAGGCAGATCTAGCCAGGATCTGCCACCCC +
Preference number: 2 (lower is better)
Translates to: ASSLLRNNLACGEEV*TSKTEADLARICHP
Trigger: GGGGTGGCAGATCCTGGCTAGATCTGCCTCTGTTTTGCTGGTCAAAACCTCTTCCCCACAAGCCAGATTGTTTCTGAGGAGAGAGCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR GCA 90 bp TGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAAGATCTAGCCAGGATCTaGCACCCCTGCTCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: CRKTCQPPLGVIRNPDTEDLARI*HPCSPQ
Trigger: CTGGGGAGAGCAGGGGTGGCAGATCCTGGCTAGATC...TTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATACCCGCAGGAAGCAAGTaGGGCCTGGGCCTGCGCTCA +
Preference number: 2 (lower is better)
Translates to: QAFGLWASQSFTSVMPTIPAGSK*GLGLRS
Trigger: TGAGCGCAGGCCCAGGCCCCACTTGCTTCCTGCGGG...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp GGGAGTGGGAAATGCAATCGAATGAAGGCCCCGGTGCCACCCAAAGGCCTCAATAAACAATCTGGCTTGTaGGGAAGAGGTTTTGACCAG +
Preference number: 2 (lower is better)
Translates to: GSGKCNRMKAPVPPKGLNKQSGL*GRGFDQ
Trigger: CTGGTCAAAACCTCTTCCCCACAAGCCAGATTGTTT...ATTGAGGCCTTTGGGTGGCACCGGGGCCTTCATTCGATTGCATTTCCCACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp GGTGGGAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGTTATTAGTGGCTTCCTaGTTTCTCCCTGCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: GGRDACTGPWIDSRYPCWLLVAS*FLPAAS
Trigger: GGAGGCTGCAGGGAGAAACCAGGAAGCCACTAATAA...CCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTCCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR-3UTR CCA 90 bp AGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAATTTCTGATACCAAAGTaGCCTGGCACACCCCTATGC +
Preference number: 2 (lower is better)
Translates to: SQEATLFLTFYLPGLHQKFLIPK*PGTPLC
Trigger: GCATAGGGGTGTGCCAGGCCACTTTGGTATCAGAAA...TTTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR TCA 90 bp AGAGCTGCCCTAGAACAAATAAAGGTTCCAGACCTAGAATTACAGGGGCAGAACCCCTGCTCTCCCCAGTaGGAAATTAAGAGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: RAALEQIKVPDLELQGQNPCSPQ*EIKRVA
Trigger: TGCCACCCTCTTAATTTCTCACTGGGGAGAGCAGGG...GTTCTGCCCCTGTAATTCTAGGTCTGGAACCTTTATTTGTTCTAGGGCAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR TCA 90 bp AGAGCTGCCCTAGAACAAATAAAGGTTCCAGACCTAGAATTACAGGGGCAGAACGAGGGTGGCAATTTCTaGTACCAAAGTGGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: RAALEQIKVPDLELQGQNEGGNF*YQSGLA
Trigger: TGCCAGGCCACTTTGGTATCAGAAATTGCCACCCTC...GTTCTGCCCCTGTAATTCTAGGTCTGGAACCTTTATTTGTTCTAGGGCAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR TCA 90 bp ACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATCCCCCACATATTTACAGATAAACTaGATGCAATGGGGGCCACAG +
Preference number: 2 (lower is better)
Translates to: TCQPPLGVIRNPDTESPTYLQIN*MQWGPQ
Trigger: CTGTGGCCCCCATTGCATTCAGTTTATCTGTAAATA...TGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR GCA 90 bp AGAACTATCAATCAAGGCTTCAGCGCTTCTTCTAACATTTCAGAGACTCCACCCGAGGGGAGTGGGAAATaGAATCGAATGAAGGCCCCG +
Preference number: 2 (lower is better)
Translates to: RTINQGFSASSNISETPPEGSGK*NRMKAP
Trigger: CGGGGCCTTCATTCGATTGCATTTCCCACTCCCCTC...GGGTGGAGTCTCTGAAATGTTAGAAGAAGCGCTGAAGCCTTGATTGATAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp TTAATGGGACATTTTAGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCGATACCAAAGTGGCCTaGCACACCCCTATGCCCAAG +
Preference number: 2 (lower is better)
Translates to: LMGHFRFWTILQKNLPASDTKVA*HTPMPK
Trigger: CTTGGGCATAGGGGTGTGCCAGGCCACTTTGGTATC...GGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCTAAAATGTCCCATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp GGGAGTGGGAAATGCAATCGAATGAAGGCCCCGGTGCCACCCAAAGGCCTCAATGAGAAATTAAGAGGGTaGCAATTTCTGATACCAAAG +
Preference number: 2 (lower is better)
Translates to: GSGKCNRMKAPVPPKGLNEKLRG*QFLIPK
Trigger: CTTTGGTATCAGAAATTGCCACCCTCTTAATTTCTC...ATTGAGGCCTTTGGGTGGCACCGGGGCCTTCATTCGATTGCATTTCCCACTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp TCAATGTTGGAGGTAGCTGCAGAGATCATGGTAACTGACTTTTTCACAGATGAGGGACAGGGGAAAGGGTaGGAGAGATGCATGCACTGG +
Preference number: 2 (lower is better)
Translates to: SMLEVAAEIMVTDFFTDEGQGKG*ERCMHW
Trigger: CCAGTGCATGCATCTCTCCCACCCTTTCCCCTGTCC...CTCATCTGTGAAAAAGTCAGTTACCATGATCTCTGCAGCTACCTCCAACATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR-3UTR CCA 90 bp AGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAAAACATTCATAGAGACTaGGCAGAGTCAGAAAAGGTC +
Preference number: 2 (lower is better)
Translates to: SQEATLFLTFYLPGLHQKNIHRD*AESEKV
Trigger: GACCTTTTCTGACTCTGCCCAGTCTCTATGAATGTT...TTTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp TTTAAGGCCCAGAGGAAGGTAATATCAGAATTAGTGACCTCCGCACCCAGCACAGAGAGATGCATGCACTaGACCCTGGATAGATTCAAG +
Preference number: 2 (lower is better)
Translates to: FKAQRKVISELVTSAPSTERCMH*TLDRFK
Trigger: CTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTC...TGTGCTGGGTGCGGAGGTCACTAATTCTGATATTACCTTCCTCTGGGCCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR-3UTR CCA 90 bp TCTGGACACTTGCCAGAAGATGTCCAAAACCCACTAAAGGAAGAAGGGGCTCAATCCTCAGAAACAATCTaGCTTGTGGGGAAGAGGTTT +
Preference number: 2 (lower is better)
Translates to: SGHLPEDVQNPLKEEGAQSSETI*LVGKRF
Trigger: AAACCTCTTCCCCACAAGCCAGATTGTTTCTGAGGA...TTGAGCCCCTTCTTCCTTTAGTGGGTTTTGGACATCTTCTGGCAAGTGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp AGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAAATCCTACTTGAAACTTaGTCAACTAGAACAGGCCTT +
Preference number: 2 (lower is better)
Translates to: SQEATLFLTFYLPGLHQKILLET*STRTGL
Trigger: AAGGCCTGTTCTAGTTGACCAAGTTTCAAGTAGGAT...TTTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR GCA 90 bp AACCTCTTAATCCTACTTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGAGGGCTAGTAATCTCTaGCAGCAGAGCTGTGATCTC +
Preference number: 2 (lower is better)
Translates to: NLLILLETWSTRTGLWPMRASNL*QQSCDL
Trigger: GAGATCACAGCTCTGCTGGCAGAGATTACTAGCCCT...CATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAAGTAGGATTAAGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp AGAGCTGCCCTAGAACAAATAAAGGTTCCAGACCTAGAATTACAGGGGCAGAACTGTGGAAGAGGGGAGTaGGAAATGCAATCGAATGAA +
Preference number: 2 (lower is better)
Translates to: RAALEQIKVPDLELQGQNCGRGE*EMQSNE
Trigger: TTCATTCGATTGCATTTCCCACTCCCCTCTTCCACA...GTTCTGCCCCTGTAATTCTAGGTCTGGAACCTTTATTTGTTCTAGGGCAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp AGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAACTCTGTAGTAAAGGATaGGTTAACACTGTTTACCAT +
Preference number: 2 (lower is better)
Translates to: SQEATLFLTFYLPGLHQKLCSKG*VNTVYH
Trigger: ATGGTAAACAGTGTTAACCCATCCTTTACTACAGAG...TTTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR GCA 90 bp TTGAAGTTCTACCCCACAAATTCAAAAGTGCTTCTTACTTTCTACCCTCGTCCCTGGCATCTGGACACTTaGCAGAAGATGTCCAAAACC +
Preference number: 2 (lower is better)
Translates to: LKFYPTNSKVLLTFYPRPWHLDT*QKMSKT
Trigger: GGTTTTGGACATCTTCTGGCAAGTGTCCAGATGCCA...GGGACGAGGGTAGAAAGTAAGAAGCACTTTTGAATTTGTGGGGTAGAACTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR GCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATAGCATGTTCCCAGAGCTaGCCTAGAACAAATAAAGGT +
Preference number: 2 (lower is better)
Translates to: QAFGLWASQSFTSVMPTIACSQS*PRTNKG
Trigger: ACCTTTATTTGTTCTAGGGCAGCTCTGGGAACATGC...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp TGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATTATTACTTCCATTTTaGGCTCAACATAATGGTTCC +
Preference number: 2 (lower is better)
Translates to: CRKTCQPPLGVIRNPDTELLLPF*AQHNGS
Trigger: GGAACCATTATGTTGAGCCCAAAATGGAAGTAATAA...TTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CCA 90 bp AACCTCTTAATCCTACTTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGCACCTTCTGTGTTTCTaGTCACTTTTAATCACACTT +
Preference number: 2 (lower is better)
Translates to: NLLILLETWSTRTGLWPMHLLCF*SLLITL
Trigger: AAGTGTGATTAAAAGTGACCAGAAACACAGAAGGTG...CATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAAGTAGGATTAAGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 72 bp TGGAGCGATCAACTCAGTGCTAAGAACAGGCCCCCGTaGGAGGATGATGGACTCCACTTGAGCCCTGGTGGG +
Preference number: 3 (lower is better)
Translates to: WSDQLSAKNRPP*EDDGLHLSPGG
Trigger: CCCACCAGGGCTCAAGTGGAGTCCATCATCCTCCCACGGGGGCCTGTTCTTAGCACTGAGTTGATCGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR GCA 72 bp GCATGCACTGGACCCTGGATAGATTCAAGATACCCTTaGTGGGGGAGGGTGGGCTGGCCCGTTAGTTCTAAC +
Preference number: 3 (lower is better)
Translates to: ACTGPWIDSRYP*WGRVGWPVSSN
Trigger: GTTAGAACTAACGGGCCAGCCCACCCTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR TCA 72 bp AGAACAGGCCCCCGTGGGAGGATGATGGACTCCACTTaGGCCCTGGTGGGTCTCTACCACTATAGATGGATA +
Preference number: 3 (lower is better)
Translates to: RTGPRGRMMDST*ALVGLYHYRWI
Trigger: TATCCATCTATAGTGGTAGAGACCCACCAGGGCTCAAGTGGAGTCCATCATCCTCCCACGGGGGCCTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR TCA 72 bp CACTTGTGGAAGAGGGGAGTGGGAAATGCAATCGAATaGAGGCCCCGGTGCCACCCAAAGGCCTCAATAAAT +
Preference number: 3 (lower is better)
Translates to: HLWKRGVGNAIE*RPRCHPKASIN
Trigger: ATTTATTGAGGCCTTTGGGTGGCACCGGGGCCTTCATTCGATTGCATTTCCCACTCCCCTCTTCCACAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 72 bp ATAGATTCAAGATACCCTTGCTGGGGGAGGGTGGGCTaGCCCGTTAGTTCTAACTCAGTCTTCTCAGTGCCA +
Preference number: 3 (lower is better)
Translates to: IDSRYPCWGRVG*PVSSNSVFSVP
Trigger: TGGCACTGAGAAGACTGAGTTAGAACTAACGGGCCAGCCCACCCTCCCCCAGCAAGGGTATCTTGAATCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR-3UTR CAA 90 bp CAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAACTGGCATCTGGACACTaGCCAGAAGATGTCCAAAAC +
Preference number: 3 (lower is better)
Translates to: QPRGNPVPHFLPTWPTPELASGH*PEDVQN
Trigger: GTTTTGGACATCTTCTGGCAAGTGTCCAGATGCCAG...TTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR TCA 72 bp CATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTaGTACGGAATCCAGATACAGAATCCCCCACACCCA +
Preference number: 3 (lower is better)
Translates to: HLAEKPASLHLE*YGIQIQNPPHP
Trigger: TGGGTGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR GCA 72 bp CCAAGCCAAACGAGAGAGCCAAGGGCTAGTAATCTCTaGCAGCAGAGCTGTGATCTCACCTTCTGTGTTTCT +
Preference number: 3 (lower is better)
Translates to: PSQTREPRASNL*QQSCDLTFCVS
Trigger: AGAAACACAGAAGGTGAGATCACAGCTCTGCTGGCAGAGATTACTAGCCCTTGGCTCTCTCGTTTGGCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 72 bp ATTAAGAGGGTGGCAATTTCTGATACCAAAGTGGCCTaGCACACCCCTATGCCCAAGCCTGATAGGGAAGCA +
Preference number: 3 (lower is better)
Translates to: IKRVAISDTKVA*HTPMPKPDREA
Trigger: TGCTTCCCTATCAGGCTTGGGCATAGGGGTGTGCCAGGCCACTTTGGTATCAGAAATTGCCACCCTCTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 72 bp GAGAAATTAAGAGGGTGGCAATTTCTGATACCAAAGTaGCCTGGCACACCCCTATGCCCAAGCCTGATAGGG +
Preference number: 3 (lower is better)
Translates to: EKLRGWQFLIPK*PGTPLCPSLIG
Trigger: CCCTATCAGGCTTGGGCATAGGGGTGTGCCAGGCCACTTTGGTATCAGAAATTGCCACCCTCTTAATTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 72 bp TGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTaGAGTGATACGGAATCCAGATACAGAATCCCCCAC +
Preference number: 3 (lower is better)
Translates to: WTILQKNLPAST*SDTESRYRIPH
Trigger: GTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CAA 90 bp GATGAGGAATTTAAGGCCCAGAGGAAGGTAATATCAGAATTAGTGACCTCCGCAAGATTCAAGATACCCTaGCTGGGGGAGGGTGGGCTG +
Preference number: 3 (lower is better)
Translates to: DEEFKAQRKVISELVTSARFKIP*LGEGGL
Trigger: CAGCCCACCCTCCCCCAGCAAGGGTATCTTGAATCT...TGCGGAGGTCACTAATTCTGATATTACCTTCCTCTGGGCCTTAAATTCCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537931.2
3UTR TCA 72 bp GATCTAGCCAGGATCTGCCACCCCTGCTCTCCCCAGTaGGAAATTAAGAGGGTGGCAATTTCTGATACCAAA +
Preference number: 3 (lower is better)
Translates to: DLARICHPCSPQ*EIKRVAISDTK
Trigger: TTTGGTATCAGAAATTGCCACCCTCTTAATTTCTCACTGGGGAGAGCAGGGGTGGCAGATCCTGGCTAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR TCA 72 bp AGAACCTACAACATCCAGAATACCAGAGAGGGTTCCTaGCCCAATTCCACAATCCCGCATGTTCCCAGAGCT +
Preference number: 3 (lower is better)
Translates to: RTYNIQNTREGS*PNSTIPHVPRA
Trigger: AGCTCTGGGAACATGCGGGATTGTGGAATTGGGTCAGGAACCCTCTCTGGTATTCTGGATGTTGTAGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CAA 90 bp TCTGGACACTTGCCAGAAGATGTCCAAAACCCACTAAAGGAAGAAGGGGCTCAACAGAAACAATCTGGCTaGTGGGGAAGAGGTTTTGAC +
Preference number: 3 (lower is better)
Translates to: SGHLPEDVQNPLKEEGAQQKQSG*WGRGFD
Trigger: GTCAAAACCTCTTCCCCACAAGCCAGATTGTTTCTG...TTGAGCCCCTTCTTCCTTTAGTGGGTTTTGGACATCTTCTGGCAAGTGTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CAA 90 bp TTGAAGTTCTACCCCACAAATTCAAAAGTGCTTCTTACTTTCTACCCTCGTCCCGATGATGGACTCCACTaGAGCCCTGGTGGGTCTCTA +
Preference number: 3 (lower is better)
Translates to: LKFYPTNSKVLLTFYPRPDDGLH*SPGGSL
Trigger: TAGAGACCCACCAGGGCTCAAGTGGAGTCCATCATC...GGGACGAGGGTAGAAAGTAAGAAGCACTTTTGAATTTGTGGGGTAGAACTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CAA 90 bp AGAACTATCAATCAAGGCTTCAGCGCTTCTTCTAACATTTCAGAGACTCCACCCTGTGGGGAAGAGGTTTaGACCAGCAAAACAGAGGCA +
Preference number: 3 (lower is better)
Translates to: RTINQGFSASSNISETPPCGEEV*TSKTEA
Trigger: TGCCTCTGTTTTGCTGGTCAAAACCTCTTCCCCACA...GGGTGGAGTCTCTGAAATGTTAGAAGAAGCGCTGAAGCCTTGATTGATAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR GCA 72 bp CTGACCCAATTCCACAATCCCGCATGTTCCCAGAGCTaGCCTAGAACAAATAAAGGTTCCAGACCTAGAATT +
Preference number: 3 (lower is better)
Translates to: LTQFHNPACSQS*PRTNKGSRPRI
Trigger: AATTCTAGGTCTGGAACCTTTATTTGTTCTAGGGCAGCTCTGGGAACATGCGGGATTGTGGAATTGGGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR-3UTR CAA 90 bp TTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTAGATTCTGGACCATCTaGCAGAAAAACCTGCCAGCC +
Preference number: 3 (lower is better)
Translates to: LKLGQLEQAFGLWASQSFRFWTI*QKNLPA
Trigger: GGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCT...AAAAGATTGACTAGCCCATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 72 bp ACCATCCCTTCTAGAGGAAAAGAAGGTTCTGGCATCTaGACACTTGCCAGAAGATGTCCAAAACCCACTAAA +
Preference number: 3 (lower is better)
Translates to: TIPSRGKEGSGI*TLARRCPKPTK
Trigger: TTTAGTGGGTTTTGGACATCTTCTGGCAAGTGTCCAGATGCCAGAACCTTCTTTTCCTCTAGAAGGGATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 72 bp TTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATaGGCTAGTCAATCTTTTACATCTGTAATGCCAACA +
Preference number: 3 (lower is better)
Translates to: LKLGQLEQAFGL*ASQSFTSVMPT
Trigger: TGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CCA 72 bp GTAACATTCAAACCCATATGCCTCTGTAGTAAAGGATaGGTTAACACTGTTTACCATCTAATCAAGCTAAAG +
Preference number: 3 (lower is better)
Translates to: VTFKPICLCSKG*VNTVYHLIKLK
Trigger: CTTTAGCTTGATTAGATGGTAAACAGTGTTAACCCATCCTTTACTACAGAGGCATATGGGTTTGAATGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp CCACCCAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCACAGGCCCCCGTCCTaGAGGGGCCGCGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PPSQEATLFLTFYLPGLHHRPPS*RGRGFS
Trigger: AGAGAAGCCGCGGCCCCTGCAGGACGGGGGCCTGTG...GTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp GGAGGCATGTCGCCAGCATTAAGATCTCCAGCACAGATGCACGCCCCGGCCTCTGTGTGGATCAGCACGTaGGCCCGCAGATGTGCCACC +
Preference number: 4 (lower is better)
Translates to: GGMSPALRSPAQMHAPASVWIST*ARRCAT
Trigger: GGTGGCACATCTGCGGGCGCACGTGCTGATCCACAC...AGAGGCCGGGGCGTGCATCTGTGCTGGAGATCTTAATGCTGGCGACATGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CCA 90 bp GGAGGCATGTCGCCAGCATTAAGATCTCCAGCACAGATGCACGCCCCGGCCTCTCTTGCTGGGGGAGGGTaGGCTGGCCCGTTAGTTCTA +
Preference number: 4 (lower is better)
Translates to: GGMSPALRSPAQMHAPASLAGGG*AGPLVL
Trigger: TAGAACTAACGGGCCAGCCCACCCTCCCCCAGCAAG...AGAGGCCGGGGCGTGCATCTGTGCTGGAGATCTTAATGCTGGCGACATGCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR TCA 90 bp CACAGGTGGAGGGCTATTCCCTTAGGGAGACCAGGACTCCAATCTCTCCCCTTTCGGAGGAGTGGCGAGTaGACTCGCGGACGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: HRWRAIPLGRPGLQSLPFRRSGE*TRGRSP
Trigger: TGGGCTACGTCCGCGAGTTCACTCGCCACTCCTCCG...AAAGGGGAGAGATTGGAGTCCTGGTCTCCCTAAGGGAATAGCCCTCCACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp CAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAGCAGGCGCAGCTCGTTaGGGTTGCCCAGCACGTCGG +
Preference number: 4 (lower is better)
Translates to: QPRGNPVPHFLPTWPTPEAGAAR*GCPARR
Trigger: CCGACGTGCTGGGCAACCTCAACGAGCTGCGCCTGC...TTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp CAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAGGAGTCCAGCCCCGATaGGCACCCTGCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: QPRGNPVPHFLPTWPTPEGVQPR*APCHSL
Trigger: GAGGCTGTGGCAGGGTGCTCATCGGGGCTGGACTCC...TTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TACCAGAGAGGGTTCCTGACCCAATTCCACAATCCCGCATGTTCCCAGAGCTGCTGCTGGTGCAGTGGCTaGAGAGAGGCGCAGGCGCGA +
Preference number: 4 (lower is better)
Translates to: YQRGFLTQFHNPACSQSCCWCSG*REAQAR
Trigger: TCGCGCCTGCGCCTCTCTCCAGCCACTGCACCAGCA...GCAGCTCTGGGAACATGCGGGATTGTGGAATTGGGTCAGGAACCCTCTCTGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp CACAGGTGGAGGGCTATTCCCTTAGGGAGACCAGGACTCCAATCTCTCCCCTTTGGCCGTTGGGGGTGTTaGGGGTTCTGCTTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: HRWRAIPLGRPGLQSLPFGRWGC*GFCFQG
Trigger: CCCCTGGAAGCAGAACCCCCAACACCCCCAACGGCC...AAAGGGGAGAGATTGGAGTCCTGGTCTCCCTAAGGGAATAGCCCTCCACCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp GGGAGTGGGAAATGCAATCGAATGAAGGCCCCGGTGCCACCCAAAGGCCTCAATGCTTGGGGGCAAGGTTaGCCAGAACTTCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GSGKCNRMKAPVPPKGLNAWGQG*PELLSP
Trigger: CGGGGAGAGAAGTTCTGGTCAACCTTGCCCCCAAGC...ATTGAGGCCTTTGGGTGGCACCGGGGCCTTCATTCGATTGCATTTCCCACTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp CACAGGTGGAGGGCTATTCCCTTAGGGAGACCAGGACTCCAATCTCTCCCCTTTGCCTGGATGAAGCGGTaGCATGCCTGGACCACGTGC +
Preference number: 4 (lower is better)
Translates to: HRWRAIPLGRPGLQSLPFAWMKR*HAWTTC
Trigger: GCACGTGGTCCAGGCATGCCACCGCTTCATCCAGGC...AAAGGGGAGAGATTGGAGTCCTGGTCTCCCTAAGGGAATAGCCCTCCACCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp ACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATCCCCCACAGTCCTTCGGAGCGCCTaGGACTACCTGGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TCQPPLGVIRNPDTESPTVLRSA*DYLVEG
Trigger: CCCCTCCACCAGGTAGTCCCAGGCGCTCCGAAGGAC...TGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp CACAGGTGGAGGGCTATTCCCTTAGGGAGACCAGGACTCCAATCTCTCCCCTTTTTGAGGGTCTGCAGGTaGCGGAAGCGGGTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: HRWRAIPLGRPGLQSLPFLRVCR*RKRVPQ
Trigger: CTGCGGAACCCGCTTCCGCCACCTGCAGACCCTCAA...AAAGGGGAGAGATTGGAGTCCTGGTCTCCCTAAGGGAATAGCCCTCCACCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp GGTGATGGAGGCATGTCGCCAGCATTAAGATCTCCAGCACAGATGCACGCCCCGGGACAGGGGAAAGGGTaGGAGAGATGCATGCACTGG +
Preference number: 4 (lower is better)
Translates to: GDGGMSPALRSPAQMHAPGQGKG*ERCMHW
Trigger: CCAGTGCATGCATCTCTCCCACCCTTTCCCCTGTCC...CGGGGCGTGCATCTGTGCTGGAGATCTTAATGCTGGCGACATGCCTCCATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR GCA 90 bp CCACCCAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACGATGAAGCGGTGGCATaGCTGGACCACGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: PPSQEATLFLTFYLPGLHDEAVA*LDHVLH
Trigger: ATGGAGCACGTGGTCCAGGCATGCCACCGCTTCATC...GTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AAAGAGGGAAGAGGGAGAAGAGTAGCTTTCTCACTAGTCCCCAGGCGACAGCCACCCGACCAGGCTCCCTaGTTGGGAGGCCTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: KEGRGRRVAFSLVPRRQPPDQAP*LGGLRV
Trigger: AACTCTCAGGCCTCCCAAGCAGGGAGCCTGGTCGGG...TGGCTGTCGCCTGGGGACTAGTGAGAAAGCTACTCTTCTCCCTCTTCCCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AAAGAGGGAAGAGGGAGAAGAGTAGCTTTCTCACTAGTCCCCAGGCGACAGCCAGTGTGGATCAGCACGTaGGCCCGCAGATGTGCCACC +
Preference number: 4 (lower is better)
Translates to: KEGRGRRVAFSLVPRRQPVWIST*ARRCAT
Trigger: GGTGGCACATCTGCGGGCGCACGTGCTGATCCACAC...TGGCTGTCGCCTGGGGACTAGTGAGAAAGCTACTCTTCTCCCTCTTCCCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp GATGGAGGCATGTCGCCAGCATTAAGATCTCCAGCACAGATGCACGCCCCGGCCAAAGGGTGGGAGAGATaGATGCACTGGACCCTGGAT +
Preference number: 4 (lower is better)
Translates to: DGGMSPALRSPAQMHAPAKGWER*MHWTLD
Trigger: ATCCAGGGTCCAGTGCATGCATCTCTCCCACCCTTT...GGCCGGGGCGTGCATCTGTGCTGGAGATCTTAATGCTGGCGACATGCCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CCA 90 bp ACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATCCCCCACAAGCACGTCGGAGGAGTaGCGAGTGAACTCGCGGACG +
Preference number: 4 (lower is better)
Translates to: TCQPPLGVIRNPDTESPTSTSEE*RVNSRT
Trigger: CGTCCGCGAGTTCACTCGCCACTCCTCCGACGTGCT...TGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp CCACCCAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACTTCAGTAGGTGGGTCTaGGTGTCCTTCGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: PPSQEATLFLTFYLPGLHFSRWV*VSFGAP
Trigger: AGGCGCTCCGAAGGACACCCAGACCCACCTACTGAA...GTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AAAGAGGGAAGAGGGAGAAGAGTAGCTTTCTCACTAGTCCCCAGGCGACAGCCATCCAGTTGCAGGCCTTaGGGTCAGGGCTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KEGRGRRVAFSLVPRRQPSSCRP*GQGWLD
Trigger: GTCCAGCCAGCCCTGACCCCAAGGCCTGCAACTGGA...TGGCTGTCGCCTGGGGACTAGTGAGAAAGCTACTCTTCTCCCTCTTCCCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGAGGCCTCGTCTCCACTaGGGAGCCTGGCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RFWTILQKNLPASTWSDTRPRLH*GAWLGG
Trigger: GCCCCCAAGCCAGGCTCCCCAGTGGAGACGAGGCCT...CGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp GCCCCTGTGGTCTTTACGGGACCCAACTCTTATCCATCTTCCTTGGTGATGGAGTTGAGGGTCTGCAGGTaGCGGAAGCGGGTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: APVVFTGPNSYPSSLVMELRVCR*RKRVPQ
Trigger: CTGCGGAACCCGCTTCCGCCACCTGCAGACCCTCAA...CTCCATCACCAAGGAAGATGGATAAGAGTTGGGTCCCGTAAAGACCACAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR GCA 90 bp ACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATCCCCCACAGAGAACTGCCTTGTGTaGTCTGAGGGGTTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TCQPPLGVIRNPDTESPTENCLV*SEGLPA
Trigger: GGCGGGCAACCCCTCAGAGCACACAAGGCAGTTCTC...TGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp GGTGGGAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGGTGCGCCCGCAGATGTaGCACCTGTACAAAGCGCGA +
Preference number: 4 (lower is better)
Translates to: GGRDACTGPWIDSRYPCWVRPQM*HLYKAR
Trigger: TCGCGCTTTGTACAGGTGGCACATCTGCGGGCGCAC...CCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR GCA 90 bp GGGAAAGGGTGGGAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTGGCTCTTGAGGGTCTaGAGGTGGCGGAAGCGGGTT +
Preference number: 4 (lower is better)
Translates to: GKGWERCMHWTLDRFKIPWLLRV*RWRKRV
Trigger: AACCCGCTTCCGCCACCTGCAGACCCTCAAGAGCCA...GGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTCCCACCCTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR GCA 90 bp CACAGGTGGAGGGCTATTCCCTTAGGGAGACCAGGACTCCAATCTCTCCCCTTTCCTGGCACACCCCTATaGCCAAGCCTGATAGGGAAG +
Preference number: 4 (lower is better)
Translates to: HRWRAIPLGRPGLQSLPFPGTPL*PSLIGK
Trigger: CTTCCCTATCAGGCTTGGGCATAGGGGTGTGCCAGG...AAAGGGGAGAGATTGGAGTCCTGGTCTCCCTAAGGGAATAGCCCTCCACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp ACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATCCCCCACAGATCTAGCCAGGATCTaGCACCCCTGCTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: TCQPPLGVIRNPDTESPTDLARI*HPCSPQ
Trigger: CTGGGGAGAGCAGGGGTGGCAGATCCTGGCTAGATC...TGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TCTGGACACTTGCCAGAAGATGTCCAAAACCCACTAAAGGAAGAAGGGGCTCAACCCGCAGGAAGCAAGTaGGGCCTGGGCCTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SGHLPEDVQNPLKEEGAQPAGSK*GLGLRS
Trigger: TGAGCGCAGGCCCAGGCCCCACTTGCTTCCTGCGGG...TTGAGCCCCTTCTTCCTTTAGTGGGTTTTGGACATCTTCTGGCAAGTGTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp GGGAGTGGGAAATGCAATCGAATGAAGGCCCCGGTGCCACCCAAAGGCCTCAATGATACCAAAGTGGCCTaGCACACCCCTATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GSGKCNRMKAPVPPKGLNDTKVA*HTPMPK
Trigger: CTTGGGCATAGGGGTGTGCCAGGCCACTTTGGTATC...ATTGAGGCCTTTGGGTGGCACCGGGGCCTTCATTCGATTGCATTTCCCACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp ACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATCCCCCACAAGCCACTGCAGGCGATaGGAACTGCCTTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TCQPPLGVIRNPDTESPTSHCRR*ELPCVL
Trigger: GAGCACACAAGGCAGTTCTCATCGCCTGCAGTGGCT...TGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp CAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAAGCCCGTTCAGAGGGTaGTCCAGAGGTGTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: QPRGNPVPHFLPTWPTPESPFRG*SRGVLS
Trigger: GCTCAAGACACCTCTGGATCACCCTCTGAACGGGCT...TTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp TACCAGAGAGGGTTCCTGACCCAATTCCACAATCCCGCATGTTCCCAGAGCTGCACGGGCTCCGCAGATTaGGCAGTGGTAAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: YQRGFLTQFHNPACSQSCTGSAD*AVVRLF
Trigger: GAAAAGCCTTACCACTGCTCAATCTGCGGAGCCCGT...GCAGCTCTGGGAACATGCGGGATTGTGGAATTGGGTCAGGAACCCTCTCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp TACCAGAGAGGGTTCCTGACCCAATTCCACAATCCCGCATGTTCCCAGAGCTGCCCCTGCTCTCCCCAGTaGGAAATTAAGAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: YQRGFLTQFHNPACSQSCPCSPQ*EIKRVA
Trigger: TGCCACCCTCTTAATTTCTCACTGGGGAGAGCAGGG...GCAGCTCTGGGAACATGCGGGATTGTGGAATTGGGTCAGGAACCCTCTCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp AAAGAGGGAAGAGGGAGAAGAGTAGCTTTCTCACTAGTCCCCAGGCGACAGCCAGGAAATGCAATCGAATaGAGGCCCCGGTGCCACCCA +
Preference number: 4 (lower is better)
Translates to: KEGRGRRVAFSLVPRRQPGNAIE*RPRCHP
Trigger: TGGGTGGCACCGGGGCCTTCATTCGATTGCATTTCC...TGGCTGTCGCCTGGGGACTAGTGAGAAAGCTACTCTTCTCCCTCTTCCCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAAGTGCGCCCGCAGATGTaGCACCTGTACAAAGCGCGA +
Preference number: 4 (lower is better)
Translates to: SQEATLFLTFYLPGLHQKVRPQM*HLYKAR
Trigger: TCGCGCTTTGTACAGGTGGCACATCTGCGGGCGCAC...TTTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp GAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGGGGAGGATCTCCAGCACAGATaGACGCCCCGGCCTCTTGAT +
Preference number: 4 (lower is better)
Translates to: ERCMHWTLDRFKIPLLGEDLQHR*TPRPLD
Trigger: ATCAAGAGGCCGGGGCGTGCATCTGTGCTGGAGATC...CTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR GCA 90 bp GAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGGGGAGGATTCAAGATACCCTTaGTGGGGGAGGGTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ERCMHWTLDRFKIPLLGEDSRYP*WGRVGW
Trigger: CCAGCCCACCCTCCCCCAGCAAGGGTATCTTGAATC...CTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CCA 90 bp ACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATCCCCCACAGTGTGGATGCGAACGTaGCTCTTGAGGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TCQPPLGVIRNPDTESPTVWMRT*LLRVCR
Trigger: CCTGCAGACCCTCAAGAGCCACGTTCGCATCCACAC...TGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp GAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGGGGAGGTGTGGATGCGAACGTaGCTCTTGAGGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ERCMHWTLDRFKIPLLGEVWMRT*LLRVCR
Trigger: CCTGCAGACCCTCAAGAGCCACGTTCGCATCCACAC...CTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CCA 90 bp AAAGAGGGAAGAGGGAGAAGAGTAGCTTTCTCACTAGTCCCCAGGCGACAGCCAAAGAACAGGCCCCCGTaGGAGGATGATGGACTCCAC +
Preference number: 4 (lower is better)
Translates to: KEGRGRRVAFSLVPRRQPKNRPP*EDDGLH
Trigger: GTGGAGTCCATCATCCTCCCACGGGGGCCTGTTCTT...TGGCTGTCGCCTGGGGACTAGTGAGAAAGCTACTCTTCTCCCTCTTCCCTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp GAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGGGGAGCACCTCCAGCCCCTGTaGTCTTTACGGGACCCAACT +
Preference number: 4 (lower is better)
Translates to: ERCMHWTLDRFKIPLLGEHLQPL*SLRDPT
Trigger: AGTTGGGTCCCGTAAAGACCACAGGGGCTGGAGGTG...CTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR TCA 90 bp ACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATCCCCCACACCTGCTTGGGAGGCCTaGGAGTTTAGCACGATGTAC +
Preference number: 4 (lower is better)
Translates to: TCQPPLGVIRNPDTESPTPAWEA*EFSTMY
Trigger: GTACATCGTGCTAAACTCTCAGGCCTCCCAAGCAGG...TGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp GTCGCCAGCATTAAGATCTCCAGCACAGATGCACGCCCCGGCCTCTTGATATTAGTGTGCACTGTACGATaGCTGGCAAGGTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: VASIKISSTDARPGLLILVCTVR*LARLPL
Trigger: CAAGGGCAACCTTGCCAGTCATCGTACAGTGCACAC...TAATATCAAGAGGCCGGGGCGTGCATCTGTGCTGGAGATCTTAATGCTGGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR TCA 90 bp GGGAAAGGGTGGGAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCACGGGCTCCGCAGATTaGGCAGTGGTAAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GKGWERCMHWTLDRFKIPTGSAD*AVVRLF
Trigger: GAAAAGCCTTACCACTGCTCAATCTGCGGAGCCCGT...GGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTCCCACCCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR TCA 90 bp GTCGCCAGCATTAAGATCTCCAGCACAGATGCACGCCCCGGCCTCTTGATATTAATCCATCTTCCTTGGTaGTGGAGGCATGTCGCCAGC +
Preference number: 4 (lower is better)
Translates to: VASIKISSTDARPGLLILIHLPW*WRHVAS
Trigger: GCTGGCGACATGCCTCCATCACCAAGGAAGATGGAT...TAATATCAAGAGGCCGGGGCGTGCATCTGTGCTGGAGATCTTAATGCTGGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR GCA 90 bp TGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATGCTGCTGCTGCTGCTaGTGCTGGAGGCCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: CRKTCQPPLGVIRNPDTECCCCC*CWRPRL
Trigger: GAGACGAGGCCTCCAGCAGCAGCAGCAGCAGCAGCA...TTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp GGGAAAGGGTGGGAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTCAGAGCAGCAGGATaGAGGTGGCTCCGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GKGWERCMHWTLDRFKIPFRAAG*RWLRRN
Trigger: GTTTCTCCGGAGCCACCTGCATCCTGCTGCTCTGAA...GGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTCCCACCCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATAGCGCCTGGGACTACCTaGTGGAGGGGCCGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTIAPGTT*WRGRWG
Trigger: CCCCCAACGGCCCCTCCACCAGGTAGTCCCAGGCGC...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp ACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATCCCCCACAGTAGGGGGTACTGGCTaGAGCCCCACATTTGAACTG +
Preference number: 4 (lower is better)
Translates to: TCQPPLGVIRNPDTESPTVGGTG*SPTFEL
Trigger: CAGTTCAAATGTGGGGCTCCAGCCAGTACCCCCTAC...TGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp GGGAGTGGGAAATGCAATCGAATGAAGGCCCCGGTGCCACCCAAAGGCCTCAATTTTCTGATACCAAAGTaGCCTGGCACACCCCTATGC +
Preference number: 4 (lower is better)
Translates to: GSGKCNRMKAPVPPKGLNFLIPK*PGTPLC
Trigger: GCATAGGGGTGTGCCAGGCCACTTTGGTATCAGAAA...ATTGAGGCCTTTGGGTGGCACCGGGGCCTTCATTCGATTGCATTTCCCACTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp CCACCCAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACACTCCACTTGAGCCCTaGTGGGTCTCTACCACTATA +
Preference number: 4 (lower is better)
Translates to: PPSQEATLFLTFYLPGLHTPLEP*WVSTTI
Trigger: TATAGTGGTAGAGACCCACCAGGGCTCAAGTGGAGT...GTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp TACCAGAGAGGGTTCCTGACCCAATTCCACAATCCCGCATGTTCCCAGAGCTGCACGGCCCCGGAAAATTaGATAGAAGAAGCCACTGCA +
Preference number: 4 (lower is better)
Translates to: YQRGFLTQFHNPACSQSCTAPEN*IEEATA
Trigger: TGCAGTGGCTTCTTCTATTCAATTTTCCGGGGCCGT...GCAGCTCTGGGAACATGCGGGATTGTGGAATTGGGTCAGGAACCCTCTCTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp CAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAGAGGGTGGCAATTTCTaGTACCAAAGTGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: QPRGNPVPHFLPTWPTPEEGGNF*YQSGLA
Trigger: TGCCAGGCCACTTTGGTATCAGAAATTGCCACCCTC...TTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp ACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATCCCCCACATGTACTTTTTCCAGTTaGAGGCCTTGGGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TCQPPLGVIRNPDTESPTCTFSS*RPWGQG
Trigger: GCCCTGACCCCAAGGCCTGCAACTGGAAAAAGTACA...TGTGGGGGATTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp GCCCCTGTGGTCTTTACGGGACCCAACTCTTATCCATCTTCCTTGGTGATGGAGGTGCGTTTTCAGGTTTaGTGGCCGGTTAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: APVVFTGPNSYPSSLVMEVRFQV*WPVKTG
Trigger: GCCCGTTTTAACCGGCCAGCAAACCTGAAAACGCAC...CTCCATCACCAAGGAAGATGGATAAGAGTTGGGTCCCGTAAAGACCACAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR GCA 90 bp CAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAGAATGGATGCGGCTGTaGGTTTTCAGGTTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QPRGNPVPHFLPTWPTPEEWMRL*VFRFAG
Trigger: GCCAGCAAACCTGAAAACGCACAGCCGCATCCATTC...TTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp GCCCCTGTGGTCTTTACGGGACCCAACTCTTATCCATCTTCCTTGGTGATGGAGGAATGGATGCGGCTGTaGGTTTTCAGGTTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: APVVFTGPNSYPSSLVMEEWMRL*VFRFAG
Trigger: GCCAGCAAACCTGAAAACGCACAGCCGCATCCATTC...CTCCATCACCAAGGAAGATGGATAAGAGTTGGGTCCCGTAAAGACCACAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR GCA 90 bp AAAGAGGGAAGAGGGAGAAGAGTAGCTTTCTCACTAGTCCCCAGGCGACAGCCATCTCTCCCGAATGGATaGGGCTGTGCGTTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: KEGRGRRVAFSLVPRRQPSLPNG*GCAFSG
Trigger: ACCTGAAAACGCACAGCCGCATCCATTCGGGAGAGA...TGGCTGTCGCCTGGGGACTAGTGAGAAAGCTACTCTTCTCCCTCTTCCCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp GAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGGGGAGGGTGGGAGAGATGCATaGACTGGACCCTGGATAGAT +
Preference number: 4 (lower is better)
Translates to: ERCMHWTLDRFKIPLLGEGGRDA*TGPWID
Trigger: ATCTATCCAGGGTCCAGTGCATGCATCTCTCCCACC...CTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CCA 90 bp TTAATGGGACATTTTAGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCGGACTGCTGGTGCAGTaGCTGGAGAGAGGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LMGHFRFWTILQKNLPASGLLVQ*LERGAG
Trigger: GCCTGCGCCTCTCTCCAGCCACTGCACCAGCAGTCC...GGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCTAAAATGTCCCATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TTAATGGGACATTTTAGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCCCTGGGACTACCTGGTaGAGGGGCCGTTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LMGHFRFWTILQKNLPASPGTTW*RGRWGC
Trigger: ACACCCCCAACGGCCCCTCCACCAGGTAGTCCCAGG...GGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCTAAAATGTCCCATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGAATGGGGGCCACAGGTaGAGGGCTATTCCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: RFWTILQKNLPASTWSDTNGGHR*RAIPLG
Trigger: CCCTAAGGGAATAGCCCTCCACCTGTGGCCCCCATT...CGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp TTGAAGTTCTACCCCACAAATTCAAAAGTGCTTCTTACTTTCTACCCTCGTCCCGCCCCCGTGGGAGGATaGTGGACTCCACTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LKFYPTNSKVLLTFYPRPAPVGG*WTPLEP
Trigger: GGGCTCAAGTGGAGTCCATCATCCTCCCACGGGGGC...GGGACGAGGGTAGAAAGTAAGAAGCACTTTTGAATTTGTGGGGTAGAACTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp TTAATGGGACATTTTAGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCGGGGGCGCAGGGAGATaGCCAGAGGTTCATAGCTGG +
Preference number: 4 (lower is better)
Translates to: LMGHFRFWTILQKNLPASGGAGR*PEVHSW
Trigger: CCAGCTATGAACCTCTGGGCATCTCCCTGCGCCCCC...GGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCTAAAATGTCCCATTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATAGGGTGTTGGGGGTTCTaGTTCCAGGGGGCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTIGCWGF*FQGAQG
Trigger: TCCCTGCGCCCCCTGGAAGCAGAACCCCCAACACCC...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AGAGCTGCCCTAGAACAAATAAAGGTTCCAGACCTAGAATTACAGGGGCAGAACCTCTTGTGCCGGAAATaGAGGCCACAGGGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: RAALEQIKVPDLELQGQNLLCRK*RPQGSQ
Trigger: CTGCGACCCCTGTGGCCTGCATTTCCGGCACAAGAG...GTTCTGCCCCTGTAATTCTAGGTCTGGAACCTTTATTTGTTCTAGGGCAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp TTGAAGTTCTACCCCACAAATTCAAAAGTGCTTCTTACTTTCTACCCTCGTCCCAGCAAGGCCTGGGCCTaGAGCTTTCCCACCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LKFYPTNSKVLLTFYPRPSKAWA*SFPTRR
Trigger: CCTGCGGGTGGGAAAGCTGCAGGCCCAGGCCTTGCT...GGGACGAGGGTAGAAAGTAAGAAGCACTTTTGAATTTGTGGGGTAGAACTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AGTGAGAAATTAAGAGGGTGGCAATTTCTGATACCAAAGTGGCCTGGCACACCCCCATCTGCAAATAGGTaGCGGCCGCTAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: SEKLRGWQFLIPKWPGTPPSANR*RPLGLL
Trigger: CAGCAGTCCTAGCGGCCGCCACCTATTTGCAGATGG...GGGTGTGCCAGGCCACTTTGGTATCAGAAATTGCCACCCTCTTAATTTCTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTGAAGCAAGTGGGGCCTaGGCCTGCGCTCAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: LKLGQLEQAFGLWASQSFEASGA*ACAQLG
Trigger: CCCTAGCTGAGCGCAGGCCCAGGCCCCACTTGCTTC...AAAAGATTGACTAGCCCATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp CACAGGTGGAGGGCTATTCCCTTAGGGAGACCAGGACTCCAATCTCTCCCCTTTGAAGGTTCTGGCATCTaGACACTTGCCAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: HRWRAIPLGRPGLQSLPFEGSGI*TLARRC
Trigger: ACATCTTCTGGCAAGTGTCCAGATGCCAGAACCTTC...AAAGGGGAGAGATTGGAGTCCTGGTCTCCCTAAGGGAATAGCCCTCCACCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp GAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGGGGAGTTATTAGTGGCTTCCTaGTTTCTCCCTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ERCMHWTLDRFKIPLLGELLVAS*FLPAAS
Trigger: GGAGGCTGCAGGGAGAAACCAGGAAGCCACTAATAA...CTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR TCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATACTGCCTTGTGTGCTCTaGGGGGTTGCCCGCCAACCA +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTILPCVL*GVARQP
Trigger: TGGTTGGCGGGCAACCCCTCAGAGCACACAAGGCAG...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp TGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAAGGCGCGAAGTGTACATaGAGTCCAATAGAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: CRKTCQPPLGVIRNPDTEGAKCT*SPIEGR
Trigger: TCGCCCCTCTATTGGACTTCATGTACACTTCGCGCC...TTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATATGCGAACGTGGCTCTTaGGGGTCTGCAGGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTICERGS*GSAGGG
Trigger: TCCGCCACCTGCAGACCCTCAAGAGCCACGTTCGCA...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp TCAATGTTGGAGGTAGCTGCAGAGATCATGGTAACTGACTTTTTCACAGATGAGTGCGAACGTGGCTCTTaGGGGTCTGCAGGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: SMLEVAAEIMVTDFFTDECERGS*GSAGGG
Trigger: TCCGCCACCTGCAGACCCTCAAGAGCCACGTTCGCA...CTCATCTGTGAAAAAGTCAGTTACCATGATCTCTGCAGCTACCTCCAACATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR TCA 90 bp TCTGGACACTTGCCAGAAGATGTCCAAAACCCACTAAAGGAAGAAGGGGCTCAAATGATGGACTCCACTTaGGCCCTGGTGGGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: SGHLPEDVQNPLKEEGAQMMDST*ALVGLY
Trigger: GTAGAGACCCACCAGGGCTCAAGTGGAGTCCATCAT...TTGAGCCCCTTCTTCCTTTAGTGGGTTTTGGACATCTTCTGGCAAGTGTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp GAGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGGGGAGTCCGGAGAAACTTCATaGAGTCACTGGTTCGTGGTA +
Preference number: 4 (lower is better)
Translates to: ERCMHWTLDRFKIPLLGESGETS*SHWFVV
Trigger: TACCACGAACCAGTGACTTCATGAAGTTTCTCCGGA...CTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR GCA 90 bp GCCAGCATTAAGATCTCCAGCACAGATGCACGCCCCGGCCTCTTGATATTATTATCTCTCCCGAATGGATaGGGCTGTGCGTTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ASIKISSTDARPGLLILLSLPNG*GCAFSG
Trigger: ACCTGAAAACGCACAGCCGCATCCATTCGGGAGAGA...TAATAATATCAAGAGGCCGGGGCGTGCATCTGTGCTGGAGATCTTAATGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR GCA 90 bp CACAGGTGGAGGGCTATTCCCTTAGGGAGACCAGGACTCCAATCTCTCCCCTTTGCATGTTCCCAGAGCTaGCCTAGAACAAATAAAGGT +
Preference number: 4 (lower is better)
Translates to: HRWRAIPLGRPGLQSLPFACSQS*PRTNKG
Trigger: ACCTTTATTTGTTCTAGGGCAGCTCTGGGAACATGC...AAAGGGGAGAGATTGGAGTCCTGGTCTCCCTAAGGGAATAGCCCTCCACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AACCTCTTAATCCTACTTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGCTCCACTGGGGAGCCTaGCTTGGGGGCAAGGTTGAC +
Preference number: 4 (lower is better)
Translates to: NLLILLETWSTRTGLWPMLHWGA*LGGKVD
Trigger: GTCAACCTTGCCCCCAAGCCAGGCTCCCCAGTGGAG...CATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAAGTAGGATTAAGAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TTGAAGTTCTACCCCACAAATTCAAAAGTGCTTCTTACTTTCTACCCTCGTCCCTGCTGCTGCTGCTGCTaGAGGCCTCGTCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: LKFYPTNSKVLLTFYPRPCCCCC*RPRLHW
Trigger: CCAGTGGAGACGAGGCCTCCAGCAGCAGCAGCAGCA...GGGACGAGGGTAGAAAGTAAGAAGCACTTTTGAATTTGTGGGGTAGAACTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAAGGCTTCTCTCCCGAATaGATGCGGCTGTGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: CRKTCQPPLGVIRNPDTEGFSPE*MRLCVF
Trigger: GAAAACGCACAGCCGCATCCATTCGGGAGAGAAGCC...TTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TTAATGGGACATTTTAGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCGCAGCTCCGTGTTTCTaGCGCAGATGCAGCCGCAGT +
Preference number: 4 (lower is better)
Translates to: LMGHFRFWTILQKNLPASAAPCF*RRCSRS
Trigger: ACTGCGGCTGCATCTGCGCCAGAAACACGGAGCTGC...GGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCTAAAATGTCCCATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGCTGCCAGCCTCCACTTaGAGTGATACGGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: RFWTILQKNLPASTWSDTLPAST*SDTESR
Trigger: TCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAG...CGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TACCAGAGAGGGTTCCTGACCCAATTCCACAATCCCGCATGTTCCCAGAGCTGCCAGGCCTTTGGCCTATaGGCTAGTCAATCTTTTACA +
Preference number: 4 (lower is better)
Translates to: YQRGFLTQFHNPACSQSCQAFGL*ASQSFT
Trigger: TGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG...GCAGCTCTGGGAACATGCGGGATTGTGGAATTGGGTCAGGAACCCTCTCTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AGAGATGCATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGGGGAGGGCATGCACTGGACCCTaGATAGATTCAAGATACCCT +
Preference number: 4 (lower is better)
Translates to: RDACTGPWIDSRYPCWGRACTGP*IDSRYP
Trigger: AGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGC...CCTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCATGCATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CCA 90 bp GCCCCTGTGGTCTTTACGGGACCCAACTCTTATCCATCTTCCTTGGTGATGGAGGAGAGATGCATGCACTaGACCCTGGATAGATTCAAG +
Preference number: 4 (lower is better)
Translates to: APVVFTGPNSYPSSLVMEERCMH*TLDRFK
Trigger: CTTGAATCTATCCAGGGTCCAGTGCATGCATCTCTC...CTCCATCACCAAGGAAGATGGATAAGAGTTGGGTCCCGTAAAGACCACAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR TCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATACTTGAGCCTGGGATGTaGGGAGGTAGGGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTILEPGM*GGRGYW
Trigger: CCAGTACCCCCTACCTCCTCACATCCCAGGCTCAAG...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp AGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAACACAGTTCTGGCAGCTaGAAAATTCACTTCCCGGTA +
Preference number: 4 (lower is better)
Translates to: SQEATLFLTFYLPGLHQKHSSGS*KIHFPV
Trigger: TACCGGGAAGTGAATTTTTCAGCTGCCAGAACTGTG...TTTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp CACAGGTGGAGGGCTATTCCCTTAGGGAGACCAGGACTCCAATCTCTCCCCTTTTATTTACAGATAAACTaGATGCAATGGGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: HRWRAIPLGRPGLQSLPFYLQIN*MQWGPQ
Trigger: CTGTGGCCCCCATTGCATTCAGTTTATCTGTAAATA...AAAGGGGAGAGATTGGAGTCCTGGTCTCCCTAAGGGAATAGCCCTCCACCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AATAATATAAAATACCCAAGCCAAACGAGAGAGCCAAGGGCTAGTAATCTCTGCTGTGCTCTGAGGGGTTaGCCGCCAACCAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: NNIKYPSQTREPRASNLCCALRG*PPTSSV
Trigger: CACGCTGCTGGTTGGCGGGCAACCCCTCAGAGCACA...GCAGAGATTACTAGCCCTTGGCTCTCTCGTTTGGCTTGGGTATTTTATATTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAATGGCATCTGGACACTTaGCAGAAGATGTCCAAAACC +
Preference number: 4 (lower is better)
Translates to: SQEATLFLTFYLPGLHQKWHLDT*QKMSKT
Trigger: GGTTTTGGACATCTTCTGGCAAGTGTCCAGATGCCA...TTTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AGTGAGAAATTAAGAGGGTGGCAATTTCTGATACCAAAGTGGCCTGGCACACCCTCGAGATTCAGTAGGTaGGTCTGGGTGTCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: SEKLRGWQFLIPKWPGTPSRFSR*VWVSFG
Trigger: TCCGAAGGACACCCAGACCCACCTACTGAATCTCGA...GGGTGTGCCAGGCCACTTTGGTATCAGAAATTGCCACCCTCTTAATTTCTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AACCTCTTAATCCTACTTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGGGAGAGAGCCTGCTCTaGGGACCAGGAATGGGTCCT +
Preference number: 4 (lower is better)
Translates to: NLLILLETWSTRTGLWPMGESLL*GPGMGP
Trigger: AGGACCCATTCCTGGTCCCCAGAGCAGGCTCTCTCC...CATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAAGTAGGATTAAGAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CAA 72 bp CTCCTCAGAAACAATCTGGCTTGTGGGGAAGAGGTTTaGACCAGCAAAACAGAGGCAGATCTAGCCAGGATC +
Preference number: 4 (lower is better)
Translates to: LLRNNLACGEEV*TSKTEADLARI
Trigger: GATCCTGGCTAGATCTGCCTCTGTTTTGCTGGTCAAAACCTCTTCCCCACAAGCCAGATTGTTTCTGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CAA 72 bp ATTAAGATCTCCAGCACAGATGCACGCCCCGGCCTCTaGATATTATTAGTGGCTTCCTGGTTTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: IKISSTDARPGL*ILLVASWFLPA
Trigger: TGCAGGGAGAAACCAGGAAGCCACTAATAATATCAAGAGGCCGGGGCGTGCATCTGTGCTGGAGATCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR TCA 90 bp AATAATATAAAATACCCAAGCCAAACGAGAGAGCCAAGGGCTAGTAATCTCTGCCATAGCTGGCCTGGATaGAGCGGTGGCATGCCTGGA +
Preference number: 4 (lower is better)
Translates to: NNIKYPSQTREPRASNLCHSWPG*SGGMPG
Trigger: TCCAGGCATGCCACCGCTTCATCCAGGCCAGCTATG...GCAGAGATTACTAGCCCTTGGCTCTCTCGTTTGGCTTGGGTATTTTATATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AACCTCTTAATCCTACTTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGGCAGGCGATGAGAACTaGCTTGTGTGCTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: NLLILLETWSTRTGLWPMAGDEN*LVCSEG
Trigger: CCCCTCAGAGCACACAAGGCAGTTCTCATCGCCTGC...CATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAAGTAGGATTAAGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AATAATATAAAATACCCAAGCCAAACGAGAGAGCCAAGGGCTAGTAATCTCTGCTGGCTCTTGAGGGTCTaGAGGTGGCGGAAGCGGGTT +
Preference number: 4 (lower is better)
Translates to: NNIKYPSQTREPRASNLCWLLRV*RWRKRV
Trigger: AACCCGCTTCCGCCACCTGCAGACCCTCAAGAGCCA...GCAGAGATTACTAGCCCTTGGCTCTCTCGTTTGGCTTGGGTATTTTATATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGCAGGCATTCTCCACCTaGCCATCCAATCTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: RFWTILQKNLPASTWSDTQAFST*PSNLLN
Trigger: ATTTAGCAGATTGGATGGGCAGGTGGAGAATGCCTG...CGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AATAATATAAAATACCCAAGCCAAACGAGAGAGCCAAGGGCTAGTAATCTCTGCCACAGTGGCAGCAGTTaGAGAGAGCCTGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NNIKYPSQTREPRASNLCHSGSS*REPALG
Trigger: CCCCAGAGCAGGCTCTCTCCAACTGCTGCCACTGTG...GCAGAGATTACTAGCCCTTGGCTCTCTCGTTTGGCTTGGGTATTTTATATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGCACTTTCTACCTACCTaGCCTACACCAGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: RFWTILQKNLPASTWSDTHFLPT*PTPETA
Trigger: TGCAGTTTCTGGTGTAGGCCAGGTAGGTAGAAAGTG...CGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TCAATGTTGGAGGTAGCTGCAGAGATCATGGTAACTGACTTTTTCACAGATGAGTGGGGGAGGGTGGGCTaGCCCGTTAGTTCTAACTCA +
Preference number: 4 (lower is better)
Translates to: SMLEVAAEIMVTDFFTDEWGRVG*PVSSNS
Trigger: TGAGTTAGAACTAACGGGCCAGCCCACCCTCCCCCA...CTCATCTGTGAAAAAGTCAGTTACCATGATCTCTGCAGCTACCTCCAACATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR TCA 90 bp TTGAAGTTCTACCCCACAAATTCAAAAGTGCTTCTTACTTTCTACCCTCGTCCCGTGTGCACTGTACGATaGCTGGCAAGGTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LKFYPTNSKVLLTFYPRPVCTVR*LARLPL
Trigger: CAAGGGCAACCTTGCCAGTCATCGTACAGTGCACAC...GGGACGAGGGTAGAAAGTAAGAAGCACTTTTGAATTTGTGGGGTAGAACTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp AGAACTATCAATCAAGGCTTCAGCGCTTCTTCTAACATTTCAGAGACTCCACCCCTGCCAGCAGAGCTGTaGTCTCACCTTCTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: RTINQGFSASSNISETPPLPAEL*SHLLCF
Trigger: GAAACACAGAAGGTGAGATCACAGCTCTGCTGGCAG...GGGTGGAGTCTCTGAAATGTTAGAAGAAGCGCTGAAGCCTTGATTGATAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp AACCTCTTAATCCTACTTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGACCAGAGAGGGTTCCTaGCCCAATTCCACAATCCCG +
Preference number: 4 (lower is better)
Translates to: NLLILLETWSTRTGLWPMTREGS*PNSTIP
Trigger: CGGGATTGTGGAATTGGGTCAGGAACCCTCTCTGGT...CATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAAGTAGGATTAAGAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AGAACTATCAATCAAGGCTTCAGCGCTTCTTCTAACATTTCAGAGACTCCACCCGTGCGTTTTCAGGTTTaGTGGCCGGTTAAAACGGGC +
Preference number: 4 (lower is better)
Translates to: RTINQGFSASSNISETPPVRFQV*WPVKTG
Trigger: GCCCGTTTTAACCGGCCAGCAAACCTGAAAACGCAC...GGGTGGAGTCTCTGAAATGTTAGAAGAAGCGCTGAAGCCTTGATTGATAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATAGAGGGGAGTGGGAAATaGAATCGAATGAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTIEGSGK*NRMKAP
Trigger: CGGGGCCTTCATTCGATTGCATTTCCCACTCCCCTC...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TTAATGGGACATTTTAGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCGCACTGTACGATGACTaGCAAGGTTGCCCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: LMGHFRFWTILQKNLPASALYDD*QGCPCS
Trigger: GCTACAAGGGCAACCTTGCCAGTCATCGTACAGTGC...GGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCTAAAATGTCCCATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp GATGAGGAATTTAAGGCCCAGAGGAAGGTAATATCAGAATTAGTGACCTCCGCAGCACTGTACGATGACTaGCAAGGTTGCCCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: DEEFKAQRKVISELVTSAALYDD*QGCPCS
Trigger: GCTACAAGGGCAACCTTGCCAGTCATCGTACAGTGC...TGCGGAGGTCACTAATTCTGATATTACCTTCCTCTGGGCCTTAAATTCCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CCA 90 bp TCAATGTTGGAGGTAGCTGCAGAGATCATGGTAACTGACTTTTTCACAGATGAGGGCTTCTCTCCCGAATaGATGCGGCTGTGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: SMLEVAAEIMVTDFFTDEGFSPE*MRLCVF
Trigger: GAAAACGCACAGCCGCATCCATTCGGGAGAGAAGCC...CTCATCTGTGAAAAAGTCAGTTACCATGATCTCTGCAGCTACCTCCAACATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CCA 90 bp AGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGCTCTACCACTATAGATaGATACAGCAGAGCCAAACC +
Preference number: 4 (lower is better)
Translates to: RFWTILQKNLPASTWSDTLYHYR*IQQSQT
Trigger: GGTTTGGCTCTGCTGTATCCATCTATAGTGGTAGAG...CGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp AATAATATAAAATACCCAAGCCAAACGAGAGAGCCAAGGGCTAGTAATCTCTGCAGATGCAGCCGCAGTTaGCTCTTGTGCCGGAAATGC +
Preference number: 4 (lower is better)
Translates to: NNIKYPSQTREPRASNLCRCSRS*LLCRKC
Trigger: GCATTTCCGGCACAAGAGTCAACTGCGGCTGCATCT...GCAGAGATTACTAGCCCTTGGCTCTCTCGTTTGGCTTGGGTATTTTATATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp AAAGAGGGAAGAGGGAGAAGAGTAGCTTTCTCACTAGTCCCCAGGCGACAGCCAGAACTGACTTATTGTTaGAGTTCTACCCCACAAATT +
Preference number: 4 (lower is better)
Translates to: KEGRGRRVAFSLVPRRQPELTYC*SSTPQI
Trigger: AATTTGTGGGGTAGAACTTCAACAATAAGTCAGTTC...TGGCTGTCGCCTGGGGACTAGTGAGAAAGCTACTCTTCTCCCTCTTCCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATAGCCCCACATTTGAACTaGACAGTGGCAGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTIAPHLN*TVAAVG
Trigger: TCCAACTGCTGCCACTGTGCAGTTCAAATGTGGGGC...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAATGTGGAAGAGGGGAGTaGGAAATGCAATCGAATGAA +
Preference number: 4 (lower is better)
Translates to: CRKTCQPPLGVIRNPDTECGRGE*EMQSNE
Trigger: TTCATTCGATTGCATTTCCCACTCCCCTCTTCCACA...TTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR TCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATAAGCCTCCACTTGGAGTaGTACGGAATCCAGATACAG +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTISLHLE*YGIQIQ
Trigger: CTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCT...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AGAACTATCAATCAAGGCTTCAGCGCTTCTTCTAACATTTCAGAGACTCCACCCGATTCTGGACCATCTTaGAGAAAAACCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RTINQGFSASSNISETPPDSGPS*RKTCQP
Trigger: AGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATC...GGGTGGAGTCTCTGAAATGTTAGAAGAAGCGCTGAAGCCTTGATTGATAGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AATAATATAAAATACCCAAGCCAAACGAGAGAGCCAAGGGCTAGTAATCTCTGCGCCTACACCAGAAACTaGACCCCTCAACCAACCTCT +
Preference number: 4 (lower is better)
Translates to: NNIKYPSQTREPRASNLCAYTRN*TPQPTS
Trigger: AGAGGTTGGTTGAGGGGTGCAGTTTCTGGTGTAGGC...GCAGAGATTACTAGCCCTTGGCTCTCTCGTTTGGCTTGGGTATTTTATATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATACCACTTGAGCCCTGGTaGGTCTCTACCACTATAGAT +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTIPLEPW*VSTTID
Trigger: ATCTATAGTGGTAGAGACCCACCAGGGCTCAAGTGG...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR GCA 90 bp AATAATATAAAATACCCAAGCCAAACGAGAGAGCCAAGGGCTAGTAATCTCTGCAGGGCTAGTAATCTCTaGCAGCAGAGCTGTGATCTC +
Preference number: 4 (lower is better)
Translates to: NNIKYPSQTREPRASNLCRASNL*QQSCDL
Trigger: GAGATCACAGCTCTGCTGGCAGAGATTACTAGCCCT...GCAGAGATTACTAGCCCTTGGCTCTCTCGTTTGGCTTGGGTATTTTATATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATATCTTTAATTCTGCAGTaGGGCCATGGGGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTISLILQ*GHGEKE
Trigger: CTCTTTCTCCCCATGGCCCCACTGCAGAATTAAAGA...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
3UTR CAA 72 bp CTTCTAGAGGAAAAGAAGGTTCTGGCATCTGGACACTaGCCAGAAGATGTCCAAAACCCACTAAAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: LLEEKKVLASGH*PEDVQNPLKEE
Trigger: TTCTTCCTTTAGTGGGTTTTGGACATCTTCTGGCAAGTGTCCAGATGCCAGAACCTTCTTTTCCTCTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AACCTCTTAATCCTACTTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGAAACAATCTGGCTTGTaGGGAAGAGGTTTTGACCAG +
Preference number: 4 (lower is better)
Translates to: NLLILLETWSTRTGLWPMKQSGL*GRGFDQ
Trigger: CTGGTCAAAACCTCTTCCCCACAAGCCAGATTGTTT...CATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAAGTAGGATTAAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp AATAATATAAAATACCCAAGCCAAACGAGAGAGCCAAGGGCTAGTAATCTCTGCTCCTCAGAAACAATCTaGCTTGTGGGGAAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: NNIKYPSQTREPRASNLCSSETI*LVGKRF
Trigger: AAACCTCTTCCCCACAAGCCAGATTGTTTCTGAGGA...GCAGAGATTACTAGCCCTTGGCTCTCTCGTTTGGCTTGGGTATTTTATATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATAAACATTCATAGAGACTaGGCAGAGTCAGAAAAGGTC +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTINIHRD*AESEKV
Trigger: GACCTTTTCTGACTCTGCCCAGTCTCTATGAATGTT...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATAATCCTACTTGAAACTTaGTCAACTAGAACAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTIILLET*STRTGL
Trigger: AAGGCCTGTTCTAGTTGACCAAGTTTCAAGTAGGAT...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTGAGAAATTAAGAGGGTaGCAATTTCTGATACCAAAG +
Preference number: 4 (lower is better)
Translates to: LKLGQLEQAFGLWASQSFEKLRG*QFLIPK
Trigger: CTTTGGTATCAGAAATTGCCACCCTCTTAATTTCTC...AAAAGATTGACTAGCCCATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTCACCTTCTGTGTTTCTaGTCACTTTTAATCACACTT +
Preference number: 4 (lower is better)
Translates to: LKLGQLEQAFGLWASQSFHLLCF*SLLITL
Trigger: AAGTGTGATTAAAAGTGACCAGAAACACAGAAGGTG...AAAAGATTGACTAGCCCATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp TTGAAGTTCTACCCCACAAATTCAAAAGTGCTTCTTACTTTCTACCCTCGTCCCCTCTGTAGTAAAGGATaGGTTAACACTGTTTACCAT +
Preference number: 4 (lower is better)
Translates to: LKFYPTNSKVLLTFYPRPLCSKG*VNTVYH
Trigger: ATGGTAAACAGTGTTAACCCATCCTTTACTACAGAG...GGGACGAGGGTAGAAAGTAAGAAGCACTTTTGAATTTGTGGGGTAGAACTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CCA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATATTATTACTTCCATTTTaGGCTCAACATAATGGTTCC +
Preference number: 4 (lower is better)
Translates to: QAFGLWASQSFTSVMPTILLLPF*AQHNGS
Trigger: GGAACCATTATGTTGAGCCCAAAATGGAAGTAATAA...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS TCA 90 bp CTGCTGGTGCAGTGGCTGGAGAGAGGCGCAGGCGCGAAGTGTACATaGAGTCCAATAGAGGGGCGAAGCCTCTCGCTTCGGGACCCCCGG +
Preference number: 5 (lower is better)
Translates to: LLVQWLERGAGAKCT*SPIEGRSLSLRDPR
Trigger: CCGGGGGTCCCGAAGCGAGAGGCTTCGCCCCTCTATTGGACTTCATGTACACTTCGCGCCTGCGCCTCTCTCCAGCCACTGCACCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293805.10
ENST00000573503.1
ENST00000576705.1
CDS GCA 90 bp CAGTGGCTGCAGGCGATGAGAACTGCCTTGTGTGCTCTGAGGGGTTaGCCGCCAACCAGCAGCGTGACGTCAGTGAGGATCCCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: QWLQAMRTALCALRG*PPTSSVTSVRIPRR
Trigger: CCTGCGCGGGATCCTCACTGACGTCACGCTGCTGGTTGGCGGGCAACCCCTCAGAGCACACAAGGCAGTTCTCATCGCCTGCAGCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572216.1
CDS GCA 90 bp AGAGCCTGCTCTGGGGACCAGGAATGGGTCCTTCTTCACTGCTGCTaGTGCTGCTGCTGCTGCTGCTGGAGGCCTCGTCTCCACTGGGGA +
Preference number: 5 (lower is better)
Translates to: RACSGDQEWVLLHCC*CCCCCCWRPRLHWG
Trigger: TCCCCAGTGGAGACGAGGCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGAAGAAGGACCCATTCCTGGTCCCCAGAGCAGGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS GCA 90 bp GAGAGAGCCTGCTCTGGGGACCAGGAATGGGTCCTTCTTCACTGCTaGTGCTGCTGCTGCTGCTGCTGCTGGAGGCCTCGTCTCCACTGG +
Preference number: 5 (lower is better)
Translates to: ERACSGDQEWVLLHC*CCCCCCCWRPRLHW
Trigger: CCAGTGGAGACGAGGCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGAAGAAGGACCCATTCCTGGTCCCCAGAGCAGGCTCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS GCA 90 bp AGGACTGCTGGTGCAGTGGCTGCAGGCGATGAGAACTGCCTTGTGTaGTCTGAGGGGTTGCCCGCCAACCAGCAGCGTGACGTCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RTAGAVAAGDENCLV*SEGLPANQQRDVSE
Trigger: CTCACTGACGTCACGCTGCTGGTTGGCGGGCAACCCCTCAGAGCACACAAGGCAGTTCTCATCGCCTGCAGCCACTGCACCAGCAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572216.1
CDS CCA 90 bp TTCTCCCCGGTGTGGATCAGCACGTGCGCCCGCAGATGTGCCACCTaGGAGGGAGGAGACTTCAAGTCCTGCCTCTGGGAGGAACAGAAC +
Preference number: 5 (lower is better)
Translates to: FSPVWISTCARRCAT*EGGDFKSCLWEEQN
Trigger: GTTCTGTTCCTCCCAGAGGCAGGACTTGAAGTCTCCTCCCTCCCAGGTGGCACATCTGCGGGCGCACGTGCTGATCCACACCGGGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571729.1
CDS-3UTR CAA 90 bp CCACCCAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCGCAGGCGCAGCTCGTaGAGGTTGCCCAGCACGTCG +
Preference number: 5 (lower is better)
Translates to: PPSQEATLFLTFYLPGLHRRRSS*RLPSTS
Trigger: CGACGTGCTGGGCAACCTCAACGAGCTGCGCCTGCG...GTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTGGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS CCA 90 bp CTATTGGCCCACCCCACCTCTTGCAGGTTTGCCTTGGAAGCCACTTaGAGGCTGGCTCCGTACCTGTACAAAGCGCGAGCCGCACGTCTC +
Preference number: 5 (lower is better)
Translates to: LLAHPTSCRFALEAT*RLAPYLYKARAARL
Trigger: GAGACGTGCGGCTCGCGCTTTGTACAGGTACGGAGCCAGCCTCCAAGTGGCTTCCAAGGCAAACCTGCAAGAGGTGGGGTGGGCCAATAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571729.1
CDS CCA 90 bp CCCACCCCACCTCTTGCAGGTTTGCCTTGGAAGCCACTTGGAGGCTaGCTCCGTACCTGTACAAAGCGCGAGCCGCACGTCTCACACTTA +
Preference number: 5 (lower is better)
Translates to: PTPPLAGLPWKPLGG*LRTCTKREPHVSHL
Trigger: TAAGTGTGAGACGTGCGGCTCGCGCTTTGTACAGGTACGGAGCCAGCCTCCAAGTGGCTTCCAAGGCAAACCTGCAAGAGGTGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571729.1
CDS-3UTR CAA 90 bp CAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACCAGAAGGGCCGTTGGGGGTGTaGGGGGTTCTGCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: QPRGNPVPHFLPTWPTPEGPLGV*GVLLPG
Trigger: CCCTGGAAGCAGAACCCCCAACACCCCCAACGGCCC...TTCTGGTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS GCA 90 bp AGGAACAGAACCCTCCCTATTGGCCCACCCCACCTCTTGCAGGTTTaGCTTGGAAGCCACTTGGAGGCTGGCTCCGTACCTGTACAAAGC +
Preference number: 5 (lower is better)
Translates to: RNRTLPIGPPHLLQV*LGSHLEAGSVPVQS
Trigger: GCTTTGTACAGGTACGGAGCCAGCCTCCAAGTGGCTTCCAAGGCAAACCTGCAAGAGGTGGGGTGGGCCAATAGGGAGGGTTCTGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571729.1
CDS-3UTR CAA 90 bp TACCAGAGAGGGTTCCTGACCCAATTCCACAATCCCGCATGTTCCCAGAGCTGCGCGATGAGAACTGCCTaGTGTGCTCTGAGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: YQRGFLTQFHNPACSQSCAMRTA*CALRGC
Trigger: GCAACCCCTCAGAGCACACAAGGCAGTTCTCATCGC...GCAGCTCTGGGAACATGCGGGATTGTGGAATTGGGTCAGGAACCCTCTCTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp CCACCCAGCCAAGAGGCAACCCTGTTCCTCACTTTCTACCTACCTGGCCTACACTTGTACTTTTTCCAGTaGCAGGCCTTGGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: PPSQEATLFLTFYLPGLHLYFFQ*QALGSG
Trigger: CCCTGACCCCAAGGCCTGCAACTGGAAAAAGTACAA...GTGTAGGCCAGGTAGGTAGAAAGTGAGGAACAGGGTTGCCTCTTGGCTGGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp AAAGAGGGAAGAGGGAGAAGAGTAGCTTTCTCACTAGTCCCCAGGCGACAGCCAGCTGGAGCCCCACATTaGAACTGCACAGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: KEGRGRRVAFSLVPRRQPAGAPH*NCTVAA
Trigger: TGCTGCCACTGTGCAGTTCAAATGTGGGGCTCCAGC...TGGCTGTCGCCTGGGGACTAGTGAGAAAGCTACTCTTCTCCCTCTTCCCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp AGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGATGCGAACGTGGCTCTaGAGGGTCTGCAGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: RFWTILQKNLPASTWSDTMRTWL*RVCRWR
Trigger: CCGCCACCTGCAGACCCTCAAGAGCCACGTTCGCAT...CGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp TACCAGAGAGGGTTCCTGACCCAATTCCACAATCCCGCATGTTCCCAGAGCTGCCAGATGCAGCCGCAGTaGACTCTTGTGCCGGAAATG +
Preference number: 5 (lower is better)
Translates to: YQRGFLTQFHNPACSQSCQMQPQ*TLVPEM
Trigger: CATTTCCGGCACAAGAGTCAACTGCGGCTGCATCTG...GCAGCTCTGGGAACATGCGGGATTGTGGAATTGGGTCAGGAACCCTCTCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp TACCAGAGAGGGTTCCTGACCCAATTCCACAATCCCGCATGTTCCCAGAGCTGCGATGATGGACTCCACTaGAGCCCTGGTGGGTCTCTA +
Preference number: 5 (lower is better)
Translates to: YQRGFLTQFHNPACSQSCDDGLH*SPGGSL
Trigger: TAGAGACCCACCAGGGCTCAAGTGGAGTCCATCATC...GCAGCTCTGGGAACATGCGGGATTGTGGAATTGGGTCAGGAACCCTCTCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp AGAGCTGCCCTAGAACAAATAAAGGTTCCAGACCTAGAATTACAGGGGCAGAACCGCAGCTCGTTGAGGTaGCCCAGCACGTCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RAALEQIKVPDLELQGQNRSSLR*PSTSEE
Trigger: CTCCTCCGACGTGCTGGGCAACCTCAACGAGCTGCG...GTTCTGCCCCTGTAATTCTAGGTCTGGAACCTTTATTTGTTCTAGGGCAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp ATGCACTGGACCCTGGATAGATTCAAGATACCCTTGCTGGGGGAGGGTGGGCTGTCTTATCCATCTTCCTaGGTGATGGAGGCATGTCGC +
Preference number: 5 (lower is better)
Translates to: MHWTLDRFKIPLLGEGGLSYPSS*VMEACR
Trigger: GCGACATGCCTCCATCACCAAGGAAGATGGATAAGA...CAGCCCACCCTCCCCCAGCAAGGGTATCTTGAATCTATCCAGGGTCCAGTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CAA 90 bp TGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAAGGCTTGGGGGCAAGGTaGACCAGAACTTCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: CRKTCQPPLGVIRNPDTEGLGAR*TRTSLP
Trigger: GGGGAGAGAAGTTCTGGTCAACCTTGCCCCCAAGCC...TTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp GCTGCAGAGATCATGGTAACTGACTTTTTCACAGATGAGGAATTTAAGGCCCAGATGCGAACGTGGCTCTaGAGGGTCTGCAGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: AAEIMVTDFFTDEEFKAQMRTWL*RVCRWR
Trigger: CCGCCACCTGCAGACCCTCAAGAGCCACGTTCGCAT...CTGGGCCTTAAATTCCTCATCTGTGAAAAAGTCAGTTACCATGATCTCTGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CAA 90 bp AATAATATAAAATACCCAAGCCAAACGAGAGAGCCAAGGGCTAGTAATCTCTGCGTGTGCTCTGAGGGGTaGCCCGCCAACCAGCAGCGT +
Preference number: 5 (lower is better)
Translates to: NNIKYPSQTREPRASNLCVCSEG*PANQQR
Trigger: ACGCTGCTGGTTGGCGGGCAACCCCTCAGAGCACAC...GCAGAGATTACTAGCCCTTGGCTCTCTCGTTTGGCTTGGGTATTTTATATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp GCCAGCATTAAGATCTCCAGCACAGATGCACGCCCCGGCCTCTTGATATTATTAAACGGGCTCCGCAGATaGAGCAGTGGTAAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: ASIKISSTDARPGLLILLNGLRR*SSGKAF
Trigger: AAAAGCCTTACCACTGCTCAATCTGCGGAGCCCGTT...TAATAATATCAAGAGGCCGGGGCGTGCATCTGTGCTGGAGATCTTAATGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CAA 90 bp AGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGTGTGGGGAAGAGGTTTaGACCAGCAAAACAGAGGCA +
Preference number: 5 (lower is better)
Translates to: RFWTILQKNLPASTWSDTCGEEV*TSKTEA
Trigger: TGCCTCTGTTTTGCTGGTCAAAACCTCTTCCCCACA...CGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp AGATTCTGGACCATCTTGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGCAGAAACAATCTGGCTaGTGGGGAAGAGGTTTTGAC +
Preference number: 5 (lower is better)
Translates to: RFWTILQKNLPASTWSDTQKQSG*WGRGFD
Trigger: GTCAAAACCTCTTCCCCACAAGCCAGATTGTTTCTG...CGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp GCTGCAGAGATCATGGTAACTGACTTTTTCACAGATGAGGAATTTAAGGCCCAGGCACGCCCCGGCCTCTaGATATTATTAGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: AAEIMVTDFFTDEEFKAQARPGL*ILLVAS
Trigger: GGAAGCCACTAATAATATCAAGAGGCCGGGGCGTGC...CTGGGCCTTAAATTCCTCATCTGTGAAAAAGTCAGTTACCATGATCTCTGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CAA 90 bp TCAATGTTGGAGGTAGCTGCAGAGATCATGGTAACTGACTTTTTCACAGATGAGAGATTCAAGATACCCTaGCTGGGGGAGGGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SMLEVAAEIMVTDFFTDERFKIP*LGEGGL
Trigger: CAGCCCACCCTCCCCCAGCAAGGGTATCTTGAATCT...CTCATCTGTGAAAAAGTCAGTTACCATGATCTCTGCAGCTACCTCCAACATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537931.2
CDS-3UTR CAA 90 bp AGAACTATCAATCAAGGCTTCAGCGCTTCTTCTAACATTTCAGAGACTCCACCCCACGGCCCCGGAAAATaGAATAGAAGAAGCCACTGC +
Preference number: 5 (lower is better)
Translates to: RTINQGFSASSNISETPPHGPGK*NRRSHC
Trigger: GCAGTGGCTTCTTCTATTCAATTTTCCGGGGCCGTG...GGGTGGAGTCTCTGAAATGTTAGAAGAAGCGCTGAAGCCTTGATTGATAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp AGAGCTGCCCTAGAACAAATAAAGGTTCCAGACCTAGAATTACAGGGGCAGAACCTGGCATCTGGACACTaGCCAGAAGATGTCCAAAAC +
Preference number: 5 (lower is better)
Translates to: RAALEQIKVPDLELQGQNLASGH*PEDVQN
Trigger: GTTTTGGACATCTTCTGGCAAGTGTCCAGATGCCAG...GTTCTGCCCCTGTAATTCTAGGTCTGGAACCTTTATTTGTTCTAGGGCAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp AACCTCTTAATCCTACTTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGAACGGGCTCCGCAGATaGAGCAGTGGTAAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: NLLILLETWSTRTGLWPMNGLRR*SSGKAF
Trigger: AAAAGCCTTACCACTGCTCAATCTGCGGAGCCCGTT...CATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAAGTAGGATTAAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp AGTGAGAAATTAAGAGGGTGGCAATTTCTGATACCAAAGTGGCCTGGCACACCCTGGTTCCTATCACCCTaGAAGAACAGAGAAATGTCT +
Preference number: 5 (lower is better)
Translates to: SEKLRGWQFLIPKWPGTPWFLSP*KNREMS
Trigger: AGACATTTCTCTGTTCTTCAAGGGTGATAGGAACCA...GGGTGTGCCAGGCCACTTTGGTATCAGAAATTGCCACCCTCTTAATTTCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp CAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTACATCTGTAATGCCAACAATAAGATTCTGGACCATCTaGCAGAAAAACCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: QAFGLWASQSFTSVMPTIRFWTI*QKNLPA
Trigger: GGCTGGCAGGTTTTTCTGCAAGATGGTCCAGAATCT...TATTGTTGGCATTACAGATGTAAAAGATTGACTAGCCCATAGGCCAAAGGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp TGCAGAAAAACCTGCCAGCCTCCACTTGGAGTGATACGGAATCCAGATACAGAAACTAGAACTGACTTATaGTTGAAGTTCTACCCCACA +
Preference number: 5 (lower is better)
Translates to: CRKTCQPPLGVIRNPDTETRTDL*LKFYPT
Trigger: TGTGGGGTAGAACTTCAACAATAAGTCAGTTCTAGT...TTCTGTATCTGGATTCCGTATCACTCCAAGTGGAGGCTGGCAGGTTTTTCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp AACCTCTTAATCCTACTTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGAGAACTGACTTATTGTaGAAGTTCTACCCCACAAAT +
Preference number: 5 (lower is better)
Translates to: NLLILLETWSTRTGLWPMRTDLL*KFYPTN
Trigger: ATTTGTGGGGTAGAACTTCAACAATAAGTCAGTTCT...CATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAAGTAGGATTAAGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS-3UTR CAA 90 bp TTGAAACTTGGTCAACTAGAACAGGCCTTTGGCCTATGGGCTAGTCAATCTTTTTCCAAGGATCTGATGTaGCAAGATCTAACATTTCTA +
Preference number: 5 (lower is better)
Translates to: LKLGQLEQAFGLWASQSFSKDLM*QDLTFL
Trigger: TAGAAATGTTAGATCTTGCAACATCAGATCCTTGGA...AAAAGATTGACTAGCCCATAGGCCAAAGGCCTGTTCTAGTTGACCAAGTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS CAA 90 bp ACCAGCAGCGTGACGTCAGTGAGGATCCCGCGCAGGCGCAGCTCGTaGAGGTTGCCCAGCACGTCGGAGGAGTGGCGAGTGAACTCGCGG +
Preference number: 6 (lower is better)
Translates to: TSSVTSVRIPRRRSS*RLPSTSEEWRVNSR
Trigger: CCGCGAGTTCACTCGCCACTCCTCCGACGTGCTGGGCAACCTCAACGAGCTGCGCCTGCGCGGGATCCTCACTGACGTCACGCTGCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293805.10
ENST00000572216.1
ENST00000573503.1
ENST00000576705.1
CDS CAA 72 bp GTGACGTCAGTGAGGATCCCGCGCAGGCGCAGCTCGTaGAGGTTGCCCAGCACGTCGGAGGAGTGGCGAGTG +
Preference number: 6 (lower is better)
Translates to: VTSVRIPRRRSS*RLPSTSEEWRV
Trigger: CACTCGCCACTCCTCCGACGTGCTGGGCAACCTCAACGAGCTGCGCCTGCGCGGGATCCTCACTGACGTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293805.10
ENST00000572216.1
ENST00000573503.1
ENST00000576705.1
CDS CCA 72 bp CTTCTTCACTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGAGGCCTCGTCTCCACTGGGGAGCCTGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: LLHCCCCCCCCC*RPRLHWGAWLG
Trigger: CCCAAGCCAGGCTCCCCAGTGGAGACGAGGCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGAAGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS CAA 72 bp TCAGTGAGGATCCCGCGCAGGCGCAGCTCGTTGAGGTaGCCCAGCACGTCGGAGGAGTGGCGAGTGAACTCG +
Preference number: 6 (lower is better)
Translates to: SVRIPRRRSSLR*PSTSEEWRVNS
Trigger: CGAGTTCACTCGCCACTCCTCCGACGTGCTGGGCAACCTCAACGAGCTGCGCCTGCGCGGGATCCTCACTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293805.10
ENST00000572216.1
ENST00000573503.1
ENST00000576705.1
CDS CAA 90 bp GCAGTGGCTGCAGGCGATGAGAACTGCCTTGTGTGCTCTGAGGGGTaGCCCGCCAACCAGCAGCGTGACGTCAGTGAGGATCCCGCGCAG +
Preference number: 6 (lower is better)
Translates to: AVAAGDENCLVCSEG*PANQQRDVSEDPAQ
Trigger: CTGCGCGGGATCCTCACTGACGTCACGCTGCTGGTTGGCGGGCAACCCCTCAGAGCACACAAGGCAGTTCTCATCGCCTGCAGCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572216.1
CDS GCA 72 bp GGGGACCAGGAATGGGTCCTTCTTCACTGCTGCTGCTaGTGCTGCTGCTGCTGCTGGAGGCCTCGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: GDQEWVLLHCCC*CCCCCWRPRLH
Trigger: GTGGAGACGAGGCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGAAGAAGGACCCATTCCTGGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS GCA 72 bp GGTGCAGTGGCTGCAGGCGATGAGAACTGCCTTGTGTaGTCTGAGGGGTTGCCCGCCAACCAGCAGCGTGAC +
Preference number: 6 (lower is better)
Translates to: GAVAAGDENCLV*SEGLPANQQRD
Trigger: GTCACGCTGCTGGTTGGCGGGCAACCCCTCAGAGCACACAAGGCAGTTCTCATCGCCTGCAGCCACTGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572216.1
CDS CAA 72 bp CTGCTGGTGCAGTGGCTGCAGGCGATGAGAACTGCCTaGTGTGCTCTGAGGGGTTGCCCGCCAACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LLVQWLQAMRTA*CALRGCPPTSS
Trigger: GCTGCTGGTTGGCGGGCAACCCCTCAGAGCACACAAGGCAGTTCTCATCGCCTGCAGCCACTGCACCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572216.1
CDS GCA 72 bp CAGGAATGGGTCCTTCTTCACTGCTGCTGCTGCTGCTaGTGCTGCTGCTGGAGGCCTCGTCTCCACTGGGGA +
Preference number: 6 (lower is better)
Translates to: QEWVLLHCCCCC*CCCWRPRLHWG
Trigger: TCCCCAGTGGAGACGAGGCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGAAGAAGGACCCATTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS GCA 72 bp GACCAGGAATGGGTCCTTCTTCACTGCTGCTGCTGCTaGTGCTGCTGCTGCTGGAGGCCTCGTCTCCACTGG +
Preference number: 6 (lower is better)
Translates to: DQEWVLLHCCCC*CCCCWRPRLHW
Trigger: CCAGTGGAGACGAGGCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGAAGAAGGACCCATTCCTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS GCA 72 bp TCTGGGGACCAGGAATGGGTCCTTCTTCACTGCTGCTaGTGCTGCTGCTGCTGCTGCTGGAGGCCTCGTCTC +
Preference number: 6 (lower is better)
Translates to: SGDQEWVLLHCC*CCCCCCWRPRL
Trigger: GAGACGAGGCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGAAGAAGGACCCATTCCTGGTCCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS GCA 72 bp TGCTCTGGGGACCAGGAATGGGTCCTTCTTCACTGCTaGTGCTGCTGCTGCTGCTGCTGCTGGAGGCCTCGT +
Preference number: 6 (lower is better)
Translates to: CSGDQEWVLLHC*CCCCCCCWRPR
Trigger: ACGAGGCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGAAGAAGGACCCATTCCTGGTCCCCAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS GCA 72 bp AGGACTGCTGGTGCAGTGGCTGCAGGCGATGAGAACTaGCTTGTGTGCTCTGAGGGGTTGCCCGCCAACCAG +
Preference number: 6 (lower is better)
Translates to: RTAGAVAAGDEN*LVCSEGLPANQ
Trigger: CTGGTTGGCGGGCAACCCCTCAGAGCACACAAGGCAGTTCTCATCGCCTGCAGCCACTGCACCAGCAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572216.1
CDS TCA 72 bp CAGTGGCTGGAGAGAGGCGCAGGCGCGAAGTGTACATaGAGTCCAATAGAGGGGCGAAGCCTCTCGCTTCGG +
Preference number: 6 (lower is better)
Translates to: QWLERGAGAKCT*SPIEGRSLSLR
Trigger: CCGAAGCGAGAGGCTTCGCCCCTCTATTGGACTTCATGTACACTTCGCGCCTGCGCCTCTCTCCAGCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293805.10
ENST00000573503.1
ENST00000576705.1
CDS GCA 72 bp CAGGCGATGAGAACTGCCTTGTGTGCTCTGAGGGGTTaGCCGCCAACCAGCAGCGTGACGTCAGTGAGGATC +
Preference number: 6 (lower is better)
Translates to: QAMRTALCALRG*PPTSSVTSVRI
Trigger: GATCCTCACTGACGTCACGCTGCTGGTTGGCGGGCAACCCCTCAGAGCACACAAGGCAGTTCTCATCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293805.10
ENST00000572216.1
ENST00000573503.1
ENST00000576705.1
CDS GCA 72 bp ACCCTCCCTATTGGCCCACCCCACCTCTTGCAGGTTTaGCTTGGAAGCCACTTGGAGGCTGGCTCCGTACCT +
Preference number: 6 (lower is better)
Translates to: TLPIGPPHLLQV*LGSHLEAGSVP
Trigger: AGGTACGGAGCCAGCCTCCAAGTGGCTTCCAAGGCAAACCTGCAAGAGGTGGGGTGGGCCAATAGGGAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571729.1
CDS CCA 72 bp GCCTTGACTGCAGCTTCGAGATTCAGTAGGTGGGTCTaGGTGTCCTTCGGAGCGCCTGGGACTACCTGGTGG +
Preference number: 6 (lower is better)
Translates to: ALTAASRFSRWV*VSFGAPGTTWW
Trigger: CCACCAGGTAGTCCCAGGCGCTCCGAAGGACACCCAGACCCACCTACTGAATCTCGAAGCTGCAGTCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293805.10
ENST00000572216.1
CDS CCA 72 bp CCTCTTGCAGGTTTGCCTTGGAAGCCACTTGGAGGCTaGCTCCGTACCTGTACAAAGCGCGAGCCGCACGTC +
Preference number: 6 (lower is better)
Translates to: PLAGLPWKPLGG*LRTCTKREPHV
Trigger: GACGTGCGGCTCGCGCTTTGTACAGGTACGGAGCCAGCCTCCAAGTGGCTTCCAAGGCAAACCTGCAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571729.1
CDS CCA 72 bp CACCCCACCTCTTGCAGGTTTGCCTTGGAAGCCACTTaGAGGCTGGCTCCGTACCTGTACAAAGCGCGAGCC +
Preference number: 6 (lower is better)
Translates to: HPTSCRFALEAT*RLAPYLYKARA
Trigger: GGCTCGCGCTTTGTACAGGTACGGAGCCAGCCTCCAAGTGGCTTCCAAGGCAAACCTGCAAGAGGTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571729.1
CDS CAA 72 bp GCAGGCGATGAGAACTGCCTTGTGTGCTCTGAGGGGTaGCCCGCCAACCAGCAGCGTGACGTCAGTGAGGAT +
Preference number: 6 (lower is better)
Translates to: AGDENCLVCSEG*PANQQRDVSED
Trigger: ATCCTCACTGACGTCACGCTGCTGGTTGGCGGGCAACCCCTCAGAGCACACAAGGCAGTTCTCATCGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293805.10
ENST00000572216.1
ENST00000573503.1
ENST00000576705.1
CDS GCA 72 bp GGAACAGAACCCTCCCTATTGGCCCACCCCACCTCTTaGAGGTTTGCCTTGGAAGCCACTTGGAGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: GTEPSLLAHPTS*RFALEATWRLA
Trigger: AGCCAGCCTCCAAGTGGCTTCCAAGGCAAACCTGCAAGAGGTGGGGTGGGCCAATAGGGAGGGTTCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571729.1
CDS CAA 72 bp TCCCTATTGGCCCACCCCACCTCTTGCAGGTTTGCCTaGGAAGCCACTTGGAGGCTGGCTCCGTACCTGTAC +
Preference number: 6 (lower is better)
Translates to: SLLAHPTSCRFA*EATWRLAPYLY
Trigger: GTACAGGTACGGAGCCAGCCTCCAAGTGGCTTCCAAGGCAAACCTGCAAGAGGTGGGGTGGGCCAATAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571729.1
CDS CAA 90 bp ACAGAACCCTCCCTATTGGCCCACCCCACCTCTTGCAGGTTTGCCTaGGAAGCCACTTGGAGGCTGGCTCCGTACCTGTACAAAGCGCGA +
Preference number: 6 (lower is better)
Translates to: TEPSLLAHPTSCRFA*EATWRLAPYLYKAR
Trigger: TCGCGCTTTGTACAGGTACGGAGCCAGCCTCCAAGTGGCTTCCAAGGCAAACCTGCAAGAGGTGGGGTGGGCCAATAGGGAGGGTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571729.1
CDS CAA 90 bp AGTGCTCTGGATCCAGGCAGTCCTAAGACGCCTTCCCTCCTCTGTTaGCCTTTTCCTTCCGAGGTGCAACTAGAGCCAGGACTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: SALDPGSPKTPSLLC*PFPSEVQLEPGLPA
Trigger: GGCTGGAAGTCCTGGCTCTAGTTGCACCTCGGAAGGAAAAGGCAAACAGAGGAGGGAAGGCGTCTTAGGACTGCCTGGATCCAGAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573503.1
CDS TCA 72 bp ATGAGCACCCTGCCACAGCCTCACAGTTCTGGCAGCTaGAAAATTCACTTCCCGGTAGTGGACGAGCCCGTT +
Preference number: 6 (lower is better)
Translates to: MSTLPQPHSSGS*KIHFPVVDEPV
Trigger: AACGGGCTCGTCCACTACCGGGAAGTGAATTTTTCAGCTGCCAGAACTGTGAGGCTGTGGCAGGGTGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS TCA 72 bp GAGCAGCAGGATGCAGGTGGCTCCGGAGAAACTTCATaGAGTCACTGGTTCGTGGTAAGGCTTCTCTCCGGT +
Preference number: 6 (lower is better)
Translates to: EQQDAGGSGETS*SHWFVVRLLSG
Trigger: ACCGGAGAGAAGCCTTACCACGAACCAGTGACTTCATGAAGTTTCTCCGGAGCCACCTGCATCCTGCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537931.2
ENST00000571729.1
CDS CAA 72 bp GATCCAGGCAGTCCTAAGACGCCTTCCCTCCTCTGTTaGCCTTTTCCTTCCGAGGTGCAACTAGAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: DPGSPKTPSLLC*PFPSEVQLEPG
Trigger: TCCTGGCTCTAGTTGCACCTCGGAAGGAAAAGGCAAACAGAGGAGGGAAGGCGTCTTAGGACTGCCTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573503.1
CDS TCA 72 bp CTTCTCTCCCCGACCAGGCTCCCTGCTTGGGAGGCCTaGGAGTTTAGCACGATGTACTTGTACTTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: LLSPTRLPAWEA*EFSTMYLYFFQ
Trigger: CTGGAAAAAGTACAAGTACATCGTGCTAAACTCTCAGGCCTCCCAAGCAGGGAGCCTGGTCGGGGAGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293805.10
CDS CCA 72 bp CAGGCAGGAAGTGACTTCAGAGCAGCAGGATGCAGGTaGCTCCGGAGAAACTTCATGAAGTCACTGGTTCGT +
Preference number: 6 (lower is better)
Translates to: QAGSDFRAAGCR*LRRNFMKSLVR
Trigger: ACGAACCAGTGACTTCATGAAGTTTCTCCGGAGCCACCTGCATCCTGCTGCTCTGAAGTCACTTCCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537931.2
ENST00000571729.1