RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCL2L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000129473

Ensembl transcript IDs: ENST00000250405.10, ENST00000553824.5, ENST00000554635.1, ENST00000556100.3, ENST00000556599.1, ENST00000557236.6, ENST00000557579.2, ENST00000678311.1, ENST00000679000.1, ENST00000679219.1

Found 646 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTCCCCTCCCCTCTGTGTCCTGCTCACTCTTCCAATCGCCTACCTaGCCTACTCAGCTCCCTCACACACTACCCTTTCTCTGCCCATCC +
Preference number: 1 (lower is better)
Translates to: IPLPSVSCSLFQSPT*PTQLPHTLPFLCPS
Trigger: GGATGGGCAGAGAAAGGGTAGTGTGTGAGGGAGCTGAGTAGGCCAGGTAGGCGATTGGAAGAGTGAGCAGGACACAGAGGGGAGGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 90 bp TTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTAACCTaGCCATGGTCCCTGCAGCTCCTCTTGGCTAAAGGTCCCGGGGAA +
Preference number: 1 (lower is better)
Translates to: FHPGVKASEQGILVT*PWSLQLLLAKGPGE
Trigger: TTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR TCA 90 bp AAAAGTGCAGCCCTCTCTCAAAAGCAGAAGTCTGGACTCAACACCTaGGGCCAATTTGGTCCCACGTTCTGGCGAGCACAACTACGTTGC +
Preference number: 1 (lower is better)
Translates to: KSAALSQKQKSGLNT*GQFGPTFWRAQLRC
Trigger: GCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGAGTCCAGACTTCTGCTTTTGAGAGAGGGCTGCACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR TCA 90 bp ACCCCCACCCTGAGAGACTGGTTCATCTGCCCACTCTGCCTCCAGTaGATTCCATCCTTTCCTTGGCGAAAAATTCTGCTCAGAACTAGC +
Preference number: 1 (lower is better)
Translates to: TPTLRDWFICPLCLQ*IPSFPWRKILLRTS
Trigger: GCTAGTTCTGAGCAGAATTTTTCGCCAAGGAAAGGATGGAATTCACTGGAGGCAGAGTGGGCAGATGAACCAGTCTCTCAGGGTGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557236.6
3UTR CCA 90 bp CCTCTCTCAAAAGCAGAAGTCTGGACTCAACACCTGAGGCCAATTTaGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGG +
Preference number: 1 (lower is better)
Translates to: PLSKAEVWTQHLRPI*SHVLASTTTLPHSR
Trigger: CCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGAGTCCAGACTTCTGCTTTTGAGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 90 bp GCACAAGGAAGGGGGATGATGAAGGAACAAGGCCAGCTGCAGAACTaGTCTTCTCTCCAAAGCCTTGCCAATCACTTTCTGGAAAGAAGC +
Preference number: 1 (lower is better)
Translates to: AQGRGMMKEQGQLQN*SSLQSLANHFLERS
Trigger: GCTTCTTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAAGAGCAGTTCTGCAGCTGGCCTTGTTCCTTCATCATCCCCCTTCCTTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 90 bp TCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTaGCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGAC +
Preference number: 1 (lower is better)
Translates to: SGVSLQAKKGRTGQN*PLWSHLSYASGNPD
Trigger: GTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 90 bp CACTCTGCCTCCAGTGAATTCCATCCTTTCCTTGGCGAAAAATTCTaGTCAGAACTAGCATCCTTTGCCAAGGCTTGCCTGACCACCACC +
Preference number: 1 (lower is better)
Translates to: HSASSEFHPFLGEKF*SELASFAKACLTTT
Trigger: GGTGGTGGTCAGGCAAGCCTTGGCAAAGGATGCTAGTTCTGAGCAGAATTTTTCGCCAAGGAAAGGATGGAATTCACTGGAGGCAGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557236.6
3UTR CCA 90 bp CTGGAGTACCCATCACCCTCACACCCATGGGATTCAGATCTGAAATaGTCATCTCAAGGCATCAACAGTCTCACTGAGACACAGTGTGGG +
Preference number: 1 (lower is better)
Translates to: LEYPSPSHPWDSDLK*SSQGINSLTETQCG
Trigger: CCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATCCCATGGGTGTGAGGGTGATGGGTACTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 90 bp ACACAGCATAGGCCAGTCCTGGAGTACCCATCACCCTCACACCCATaGGATTCAGATCTGAAATGGTCATCTCAAGGCATCAACAGTCTC +
Preference number: 1 (lower is better)
Translates to: TQHRPVLEYPSPSHP*DSDLKWSSQGINSL
Trigger: GAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATCCCATGGGTGTGAGGGTGATGGGTACTCCAGGACTGGCCTATGCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 90 bp TCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTaGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTT +
Preference number: 1 (lower is better)
Translates to: SLQAKKGRTGQNCPL*SHLSYASGNPDQAL
Trigger: AAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR TCA 90 bp CAGTCCTGGAGTACCCATCACCCTCACACCCATGGGATTCAGATCTaGAATGGTCATCTCAAGGCATCAACAGTCTCACTGAGACACAGT +
Preference number: 1 (lower is better)
Translates to: QSWSTHHPHTHGIQI*NGHLKASTVSLRHS
Trigger: ACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATCCCATGGGTGTGAGGGTGATGGGTACTCCAGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 90 bp GGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATaGTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACA +
Preference number: 1 (lower is better)
Translates to: GQDRSKLPTVVPSKL*FWESRPSPLPFQKT
Trigger: TGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 90 bp AGAAATACCATGAAAAAGTGCAGCCCTCTCTCAAAAGCAGAAGTCTaGACTCAACACCTGAGGCCAATTTGGTCCCACGTTCTGGCGAGC +
Preference number: 1 (lower is better)
Translates to: RNTMKKCSPLSKAEV*TQHLRPIWSHVLAS
Trigger: GCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGAGTCCAGACTTCTGCTTTTGAGAGAGGGCTGCACTTTTTCATGGTATTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 90 bp AGCAGGAGAGAAAGAAGGAGAAAGGGATATCAGGAGAGGAAAGAGTaGAGAGAAGAGGAGAGGAAGAGTTCCAGTTCCATCCACTGCGAG +
Preference number: 1 (lower is better)
Translates to: SRRERRRKGYQERKE*REEERKSSSSIHCE
Trigger: CTCGCAGTGGATGGAACTGGAACTCTTCCTCTCCTCTTCTCTCCACTCTTTCCTCTCCTGATATCCCTTTCTCCTTCTTTCTCTCCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557236.6
3UTR CCA 90 bp AGCTGCAGAACTGCTCTTCTCTCCAAAGCCTTGCCAATCACTTTCTaGAAAGAAGCAGCAGAGCCCTCGGTCTGGATACAATGTTTCTCT +
Preference number: 1 (lower is better)
Translates to: SCRTALLSKALPITF*KEAAEPSVWIQCFS
Trigger: AGAGAAACATTGTATCCAGACCGAGGGCTCTGCTGCTTCTTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAAGAGCAGTTCTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 90 bp CTGGCTCTGAGTTTCTGGTGTCAGCATACTCACAACAAGACCAAGTaGCACATGCAGCCTACCACCTCCCCTAGAAATACCATGAAAAAG +
Preference number: 1 (lower is better)
Translates to: LALSFWCQHTHNKTK*HMQPTTSPRNTMKK
Trigger: CTTTTTCATGGTATTTCTAGGGGAGGTGGTAGGCTGCATGTGCCACTTGGTCTTGTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 90 bp GACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTaGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCT +
Preference number: 1 (lower is better)
Translates to: DRSKLPTVVPSKLCF*ESRPSPLPFQKTAS
Trigger: AGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 90 bp CTTCCGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTaGGCTCTGGAGAGCAAGAAACCCCTCTCCTCCTACTTAATCTTT +
Preference number: 1 (lower is better)
Translates to: LPLLPWPKQSPYLSL*ALESKKPLSSYLIF
Trigger: AAAGATTAAGTAGGAGGAGAGGGGTTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR TCA 90 bp CACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTaGAAATCTCCAAGAAGAGTCAACCATGGTCTAGCTAAGGTGATC +
Preference number: 1 (lower is better)
Translates to: HVLASTTTLPHSRTK*KSPRRVNHGLAKVI
Trigger: GATCACCTTAGCTAGACCATGGTTGACTCTTCTTGGAGATTTTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 90 bp TGCCTTCTGCGTTCCCTAAATCCCACTCATCTAATGGAATACAGCTaGTTATGTAAGTCCACCTTCCTCAGGGCTGTGAAGCAAGTTCCA +
Preference number: 1 (lower is better)
Translates to: CLLRSLNPTHLMEYS*LCKSTFLRAVKQVP
Trigger: TGGAACTTGCTTCACAGCCCTGAGGAAGGTGGACTTACATAAGCAGCTGTATTCCATTAGATGAGTGGGATTTAGGGAACGCAGAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR TCA 90 bp GGATTCAGATCTGAAATGGTCATCTCAAGGCATCAACAGTCTCACTaGGACACAGTGTGGGACCCAGACTGTATTCTAGATCAGCACTTA +
Preference number: 1 (lower is better)
Translates to: GFRSEMVISRHQQSH*DTVWDPDCILDQHL
Trigger: TAAGTGCTGATCTAGAATACAGTCTGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 90 bp AAAAATGAAATGGATTTAAAAATTGGGAACCATACTCAGCCTTCTTaGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAG +
Preference number: 1 (lower is better)
Translates to: KNEMDLKIGNHTQPS*PRANPKELYGSRRE
Trigger: CTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAAATCCATTTCATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAACCAGGCAGCCCAGCATaGACACCAGCATGCGTGCAC +
Preference number: 2 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQPGSPA*TPACVH
Trigger: GTGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGG...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAACTGTTCCTGCTCTCCTaGCCCCCAGCCACACCTAGC +
Preference number: 2 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQLFLLS*PPATPS
Trigger: GCTAGGTGTGGCTGGGGGCCAGGAGAGCAGGAACAG...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp GAGAGGAAGAGTTCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCTCCGGTGCACCCCCACCCTaGGAGACTGGTTCATCTGCC +
Preference number: 2 (lower is better)
Translates to: ERKSSSSIHCEHYPIPSSGAPPP*ETGSSA
Trigger: GGCAGATGAACCAGTCTCTCAGGGTGGGGGTGCACC...GGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557236.6
3UTR-3UTR TCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAACCTTCCTCAGGGCTGTaGAGCAAGTTCCAGGTCGTT +
Preference number: 2 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQPSSGL*SKFQVV
Trigger: AACGACCTGGAACTTGCTTCACAGCCCTGAGGAAGG...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp ACCTCCCCCAGCCCTGGAACGACTACATCTCCTGTGCCCCTAAACTTGCCAAAACTGTTCCTGCTCTCCTaGCCCCCAGCCACACCTAGC +
Preference number: 2 (lower is better)
Translates to: TSPSPGTTTSPVPLNLPKLFLLS*PPATPS
Trigger: GCTAGGTGTGGCTGGGGGCCAGGAGAGCAGGAACAG...TTTTGGCAAGTTTAGGGGCACAGGAGATGTAGTCGTTCCAGGGCTGGGGGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAATTCCAATCGCCTACCTaGCCTACTCAGCTCCCTCAC +
Preference number: 2 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQFQSPT*PTQLPH
Trigger: GTGAGGGAGCTGAGTAGGCCAGGTAGGCGATTGGAA...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp CTACCTAAGCCTCCACCCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCACCTCCCCCAGCCCTaGAACGACTACATCTCCTGT +
Preference number: 2 (lower is better)
Translates to: LPKPPPIQAQQPCPSIRAHLPQP*NDYISC
Trigger: ACAGGAGATGTAGTCGTTCCAGGGCTGGGGGAGGTG...GGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGGGTGGAGGCTTAGGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp CTACCTAAGCCTCCACCCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCCTTCCTCAGGGCTGTaGAGCAAGTTCCAGGTCGTT +
Preference number: 2 (lower is better)
Translates to: LPKPPPIQAQQPCPSIRAPSSGL*SKFQVV
Trigger: AACGACCTGGAACTTGCTTCACAGCCCTGAGGAAGG...GGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGGGTGGAGGCTTAGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAAAGGAACAAGGCCAGCTaGAGAACTGCTCTTCTCTCC +
Preference number: 2 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQRNKAS*RTALLS
Trigger: GGAGAGAAGAGCAGTTCTGCAGCTGGCCTTGTTCCT...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp CAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTAACCTGTTCCTGCTCTCCTaGCCCCCAGCCACACCTAGC +
Preference number: 2 (lower is better)
Translates to: QPLFPPRCQGFRAGHFGNLFLLS*PPATPS
Trigger: GCTAGGTGTGGCTGGGGGCCAGGAGAGCAGGAACAG...GTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp TCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCTCCTCTCTGGCCAAACCCACCCTGAGAGACTaGTTCATCTGCCCACTCTGC +
Preference number: 2 (lower is better)
Translates to: SSSIHCEHYPIPSSSLAKPTLRD*FICPLC
Trigger: GCAGAGTGGGCAGATGAACCAGTCTCTCAGGGTGGG...TTTGGCCAGAGAGGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
3UTR-3UTR GCA 90 bp ACCTGGGGAAGGAAGCACAGACTCCAATTTGGAGCCGATGGTCTAGTCAGTGGTGCACACCAGCATGCGTaGACATGCACACGCGTGTCC +
Preference number: 2 (lower is better)
Translates to: TWGRKHRLQFGADGLVSGAHQHA*TCTRVS
Trigger: GGACACGCGTGTGCATGTGCACGCATGCTGGTGTGC...ACCACTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGCTTCCTTCCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp GTAACCTGGCCATGGTCCCTGCAGCTCCTCTTGGCTAAAGGTCCCGGGGAATGCGCACAGACTCCAATTTaGAGCCGATGGTCTAGTCAG +
Preference number: 2 (lower is better)
Translates to: VTWPWSLQLLLAKGPGECAQTPI*SRWSSQ
Trigger: CTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGC...GCATTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CAA 90 bp AGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTaGGTAACCTGGCCATGGTCCCTGCAGCTCCTCTTGGCTAAAGGT +
Preference number: 2 (lower is better)
Translates to: SLSFHPGVKASEQGI*VTWPWSLQLLLAKG
Trigger: ACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp TCTCAAGGCATCAACAGTCTCACTGAGACACAGTGTGGGACCCAGACTGTATTCAGGCACCATTGTGCCTaGGTGGGAGAGGAGGGTGGC +
Preference number: 2 (lower is better)
Translates to: SQGINSLTETQCGTQTVFRHHCA*VGEEGG
Trigger: GCCACCCTCCTCTCCCACTCAGGCACAATGGTGCCT...GAATACAGTCTGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp GTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCCTTCCATCACCACCAGATTTaGCAGGCAGCCCAGCATGCA +
Preference number: 2 (lower is better)
Translates to: VGSGINNRRTELPYFRSFHHHQI*QAAQHA
Trigger: TGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATG...GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCCACCTGAGGCCAATTTaGTCCCACGTTCTGGCGAGC +
Preference number: 2 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPIHLRPI*SHVLAS
Trigger: GCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTG...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp GTAACCTGGCCATGGTCCCTGCAGCTCCTCTTGGCTAAAGGTCCCGGGGAATGCTCAAAAGCAGAAGTCTaGACTCAACACCTGAGGCCA +
Preference number: 2 (lower is better)
Translates to: VTWPWSLQLLLAKGPGECSKAEV*TQHLRP
Trigger: TGGCCTCAGGTGTTGAGTCCAGACTTCTGCTTTTGA...GCATTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp AAGAGGAGAGGAAGAGTTCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAACTGCATGGCAGCCCTaGAGTGCAGAGTCCAGGCAT +
Preference number: 2 (lower is better)
Translates to: KRRGRVPVPSTASTTPYPTAWQP*SAESRH
Trigger: ATGCCTGGACTCTGCACTCCAGGGCTGCCATGCAGT...TGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
3UTR CAA 90 bp CTCCTGAGGCAACCCCTAGGAAACTTCAGGGCTCTGCCAAGCAGTTaGAAAACCACTGGCCTAGTTTGTCCTGAGCAAGTCAGAGACCCC +
Preference number: 2 (lower is better)
Translates to: LLRQPLGNFRALPSS*KTTGLVCPEQVRDP
Trigger: GGGGTCTCTGACTTGCTCAGGACAAACTAGGCCAGTGGTTTTCAAACTGCTTGGCAGAGCCCTGAAGTTTCCTAGGGGTTGCCTCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp TCAACACCTGAGGCCAATTTGGTCCCACGTTCTGGCGAGCACAACTACGTTGCCCATCAACAGTCTCACTaGGACACAGTGTGGGACCCA +
Preference number: 2 (lower is better)
Translates to: STPEANLVPRSGEHNYVAHQQSH*DTVWDP
Trigger: TGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATG...GGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp GCCCTACTTCCGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCCCATCCTGTTCCATaGCCACCCATCCACCAACTC +
Preference number: 2 (lower is better)
Translates to: ALLPLLPWPKQSPYLSLWAHPVP*PPIHQL
Trigger: GAGTTGGTGGATGGGTGGGCATGGAACAGGATGGGC...CCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCGGAAGTAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp TCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGGCCCATCCTGTTCCATaGCCACCCATCCACCAACTC +
Preference number: 2 (lower is better)
Translates to: SRPSPLPFQKTASLSTQVAHPVP*PPIHQL
Trigger: GAGTTGGTGGATGGGTGGGCATGGAACAGGATGGGC...CACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp ACCTGGGGAAGGAAGCACAGACTCCAATTTGGAGCCGATGGTCTAGTCAGTGGTAGACCAAGTGGCACATaGAGCCTACCACCTCCCCTA +
Preference number: 2 (lower is better)
Translates to: TWGRKHRLQFGADGLVSGRPSGT*SLPPPL
Trigger: TAGGGGAGGTGGTAGGCTGCATGTGCCACTTGGTCT...ACCACTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGCTTCCTTCCCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAATTCCAATCGCCTACCTaGCCTACTCAGCTCCCTCAC +
Preference number: 2 (lower is better)
Translates to: GPTFWRAQLRCHILGPSEFQSPT*PTQLPH
Trigger: GTGAGGGAGCTGAGTAGGCCAGGTAGGCGATTGGAA...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp CTACCTAAGCCTCCACCCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCGCAGAGCCCTCGGTCTaGATACAATGTTTCTCTCTA +
Preference number: 2 (lower is better)
Translates to: LPKPPPIQAQQPCPSIRAAEPSV*IQCFSL
Trigger: TAGAGAGAAACATTGTATCCAGACCGAGGGCTCTGC...GGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGGGTGGAGGCTTAGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAAAGCATAGGCCAGTCCTaGAGTACCCATCACCCTCAC +
Preference number: 2 (lower is better)
Translates to: GPTFWRAQLRCHILGPSESIGQS*STHHPH
Trigger: GTGAGGGTGATGGGTACTCCAGGACTGGCCTATGCT...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCGCCACAAGCTGGCTCTaGGTTTCTGGTGTCAGCATA +
Preference number: 2 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPIATSWL*VSGVSI
Trigger: TATGCTGACACCAGAAACTCAGAGCCAGCTTGTGGC...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCGCCCATCCTGTTCCATaGCCACCCATCCACCAACTC +
Preference number: 2 (lower is better)
Translates to: WSHLSYASGNPDQALYPFAHPVP*PPIHQL
Trigger: GAGTTGGTGGATGGGTGGGCATGGAACAGGATGGGC...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp CGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGATTCCAATCGCCTACCTaGCCTACTCAGCTCCCTCAC +
Preference number: 2 (lower is better)
Translates to: RSFLGLNKVPICPFGLWRFQSPT*PTQLPH
Trigger: GTGAGGGAGCTGAGTAGGCCAGGTAGGCGATTGGAA...TCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp CAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCGGCATTTTGGTAACCTaGCCATGGTCCCTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: QTKPFTLSENSLSFHPGVGILVT*PWSLQL
Trigger: GAGCTGCAGGGACCATGGCCAGGTTACCAAAATGCC...GACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp ACCACAGGCAGGGTTCTAGAGCACTGTGTCAGAAAGTTAGCATTGGAGAGCAGCCATCAACAGTCTCACTaGGACACAGTGTGGGACCCA +
Preference number: 2 (lower is better)
Translates to: TTGRVLEHCVRKLALESSHQQSH*DTVWDP
Trigger: TGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATG...GCTGCTCTCCAATGCTAACTTTCTGACACAGTGCTCTAGAACCCTGCCTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCACTCTAGAACCCATATaGCTGGCCCCTGATAAAGCC +
Preference number: 2 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPITLEPI*LAPDKA
Trigger: GGCTTTATCAGGGGCCAGGCATATGGGTTCTAGAGT...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp GATTCAGATCTGAAATGGTCATCTCAAGGCATCAACAGTCTCACTGAGACACAGCTGTTCCTGCTCTCCTaGCCCCCAGCCACACCTAGC +
Preference number: 2 (lower is better)
Translates to: DSDLKWSSQGINSLTETQLFLLS*PPATPS
Trigger: GCTAGGTGTGGCTGGGGGCCAGGAGAGCAGGAACAG...CTGTGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACCTGTTCCTGCTCTCCTaGCCCCCAGCCACACCTAGC +
Preference number: 2 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANLFLLS*PPATPS
Trigger: GCTAGGTGTGGCTGGGGGCCAGGAGAGCAGGAACAG...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CAA 90 bp CACTGTGTCAGAAAGTTAGCATTGGAGAGCAGCAATCTTAGCACCTaGGAAAGTGCAGCAGTGAGGTCTGGCTCAGGGCATGCATCTGGA +
Preference number: 2 (lower is better)
Translates to: HCVRKLALESSNLST*ESAAVRSGSGHASG
Trigger: TCCAGATGCATGCCCTGAGCCAGACCTCACTGCTGCACTTTCCAAGGTGCTAAGATTGCTGCTCTCCAATGCTAACTTTCTGACACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CAA 90 bp AGGACCACAGGCAGGGTTCTAGAGCACTGTGTCAGAAAGTTAGCATaGGAGAGCAGCAATCTTAGCACCTTGGAAAGTGCAGCAGTGAGG +
Preference number: 2 (lower is better)
Translates to: RTTGRVLEHCVRKLA*ESSNLSTLESAAVR
Trigger: CCTCACTGCTGCACTTTCCAAGGTGCTAAGATTGCTGCTCTCCAATGCTAACTTTCTGACACAGTGCTCTAGAACCCTGCCTGTGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp GCTGGCTCTGAGTTTCTGGTGTCAGCATACTCACAACAAGACCAAGTGGCACATCATCAACAGTCTCACTaGGACACAGTGTGGGACCCA +
Preference number: 2 (lower is better)
Translates to: AGSEFLVSAYSQQDQVAHHQQSH*DTVWDP
Trigger: TGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATG...ATGTGCCACTTGGTCTTGTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp TCAACACCTGAGGCCAATTTGGTCCCACGTTCTGGCGAGCACAACTACGTTGCCCATGGGATTCAGATCTaGAATGGTCATCTCAAGGCA +
Preference number: 2 (lower is better)
Translates to: STPEANLVPRSGEHNYVAHGIQI*NGHLKA
Trigger: TGCCTTGAGATGACCATTTCAGATCTGAATCCCATG...GGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp ACTCTGCCTCCAGTGAATTCCATCCTTTCCTTGGCGAAAAATTCTGCTCAGAACCCATCCAGTGTTGACTaGATGGCAGCCCTGGAGTGC +
Preference number: 2 (lower is better)
Translates to: TLPPVNSILSLAKNSAQNPSSVD*MAALEC
Trigger: GCACTCCAGGGCTGCCATGCAGTCAACACTGGATGG...GTTCTGAGCAGAATTTTTCGCCAAGGAAAGGATGGAATTCACTGGAGGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557236.6
3UTR-3UTR CCA 90 bp TATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTCCAATCGCCTACCTaGCCTACTCAGCTCCCTCAC +
Preference number: 2 (lower is better)
Translates to: YASGNPDQALYPFRKQPLFQSPT*PTQLPH
Trigger: GTGAGGGAGCTGAGTAGGCCAGGTAGGCGATTGGAA...GAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAAGCAGAGCCCTCGGTCTaGATACAATGTTTCTCTCTA +
Preference number: 2 (lower is better)
Translates to: GPTFWRAQLRCHILGPSEAEPSV*IQCFSL
Trigger: TAGAGAGAAACATTGTATCCAGACCGAGGGCTCTGC...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp TTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGACCTCTCCCTATCACCTaGGAACCCCTAAGCTTCCAT +
Preference number: 2 (lower is better)
Translates to: FLGLNKVPICPFGLWRARPLPIT*EPLSFH
Trigger: ATGGAAGCTTAGGGGTTCTCAGGTGATAGGGAGAGG...TCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCCATGGGATTCAGATCTaGAATGGTCATCTCAAGGCA +
Preference number: 2 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPIHGIQI*NGHLKA
Trigger: TGCCTTGAGATGACCATTTCAGATCTGAATCCCATG...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp TCAACACCTGAGGCCAATTTGGTCCCACGTTCTGGCGAGCACAACTACGTTGCCCATTCTAGGACCAAGTaGAAATCTCCAAGAAGAGTC +
Preference number: 2 (lower is better)
Translates to: STPEANLVPRSGEHNYVAHSRTK*KSPRRV
Trigger: GACTCTTCTTGGAGATTTTCACTTGGTCCTAGAATG...GGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp GATTCAGATCTGAAATGGTCATCTCAAGGCATCAACAGTCTCACTGAGACACAGGCCCATCCTGTTCCATaGCCACCCATCCACCAACTC +
Preference number: 2 (lower is better)
Translates to: DSDLKWSSQGINSLTETQAHPVP*PPIHQL
Trigger: GAGTTGGTGGATGGGTGGGCATGGAACAGGATGGGC...CTGTGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp GATTCAGATCTGAAATGGTCATCTCAAGGCATCAACAGTCTCACTGAGACACAGCACCTCCCCCAGCCCTaGAACGACTACATCTCCTGT +
Preference number: 2 (lower is better)
Translates to: DSDLKWSSQGINSLTETQHLPQP*NDYISC
Trigger: ACAGGAGATGTAGTCGTTCCAGGGCTGGGGGAGGTG...CTGTGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACCTCCCCTCTGTGTCCTaGTCACTCTTCCAATCGCCT +
Preference number: 2 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANLPSVS*SLFQSP
Trigger: AGGCGATTGGAAGAGTGAGCAGGACACAGAGGGGAG...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCGTCCCATCTAAGCTATaGTTCTGGGAATCCAGACCA +
Preference number: 2 (lower is better)
Translates to: GNHTQPSWPRANPKELYGVPSKL*FWESRP
Trigger: TGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGAC...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp GCTGGCTCTGAGTTTCTGGTGTCAGCATACTCACAACAAGACCAAGTGGCACATGCAGAGCCCTCGGTCTaGATACAATGTTTCTCTCTA +
Preference number: 2 (lower is better)
Translates to: AGSEFLVSAYSQQDQVAHAEPSV*IQCFSL
Trigger: TAGAGAGAAACATTGTATCCAGACCGAGGGCTCTGC...ATGTGCCACTTGGTCTTGTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp TTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACCTTCCTCAGGGCTGTaGAGCAAGTTCCAGGTCGTT +
Preference number: 2 (lower is better)
Translates to: LKIGNHTQPSWPRANPKEPSSGL*SKFQVV
Trigger: AACGACCTGGAACTTGCTTCACAGCCCTGAGGAAGG...TTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp CAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCGAAAAAGCCATAATCTaGAGCTGTTCTAGAGGACTG +
Preference number: 2 (lower is better)
Translates to: QTKPFTLSENSLSFHPGVEKAII*SCSRGL
Trigger: CAGTCCTCTAGAACAGCTTCAGATTATGGCTTTTTC...GACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp GTTTTCTCCTTGAGGAATCCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGCTAATGGAATACAGCTaGTTATGTAAGTCCACCTTC +
Preference number: 2 (lower is better)
Translates to: VFSLRNPITTRFARQPSMLMEYS*LCKSTF
Trigger: GAAGGTGGACTTACATAAGCAGCTGTATTCCATTAG...CATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGGATTCCTCAAGGAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCCTAATGGAATACAGCTaGTTATGTAAGTCCACCTTC +
Preference number: 2 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPILMEYS*LCKSTF
Trigger: GAAGGTGGACTTACATAAGCAGCTGTATTCCATTAG...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCCAAAATTGCCCACTGTaGTCCCATCTAAGCTATGCT +
Preference number: 2 (lower is better)
Translates to: GNHTQPSWPRANPKELYGQNCPL*SHLSYA
Trigger: AGCATAGCTTAGATGGGACCACAGTGGGCAATTTTG...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp CTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCCTAATGGAATACAGCTaGTTATGTAAGTCCACCTTC +
Preference number: 2 (lower is better)
Translates to: LLPWPKQSPYLSLWALESLMEYS*LCKSTF
Trigger: GAAGGTGGACTTACATAAGCAGCTGTATTCCATTAG...GCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR TCA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACGGAATGTTTTCTCCTTaGGGAATCCCATCACCACCA +
Preference number: 2 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANGMFSP*GIPSPP
Trigger: TGGTGGTGATGGGATTCCTCAAGGAGAAAACATTCC...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCGATTCAGATCTGAAATaGTCATCTCAAGGCATCAAC +
Preference number: 2 (lower is better)
Translates to: GNHTQPSWPRANPKELYGDSDLK*SSQGIN
Trigger: GTTGATGCCTTGAGATGACCATTTCAGATCTGAATC...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR GCA 90 bp TTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTAATGGAATACAGCTaGTTATGTAAGTCCACCTTC +
Preference number: 2 (lower is better)
Translates to: LKIGNHTQPSWPRANPKELMEYS*LCKSTF
Trigger: GAAGGTGGACTTACATAAGCAGCTGTATTCCATTAG...TTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CAA 90 bp CTACCTAAGCCTCCACCCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCCATCACCACCAGATTaGCCAGGCAGCCCAGCATGC +
Preference number: 3 (lower is better)
Translates to: LPKPPPIQAQQPCPSIRAPSPPD*PGSPAC
Trigger: GCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGG...GGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGGGTGGAGGCTTAGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 72 bp ATCCCATCACCACCAGATTTGCCAGGCAGCCCAGCATaGACACCAGCATGCGTGCACATGCACACGCGTGTC +
Preference number: 3 (lower is better)
Translates to: IPSPPDLPGSPA*TPACVHMHTRV
Trigger: GACACGCGTGTGCATGTGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 72 bp CTACCTAAGCCTCCACCCATCCAGGCTCAACAGCCCTaGCCTTCTATCAGAGCCCAGGAGGCAGCAGCAAGT +
Preference number: 3 (lower is better)
Translates to: LPKPPPIQAQQP*PSIRAQEAAAS
Trigger: ACTTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGGGTGGAGGCTTAGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CAA 90 bp TCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCTCCTCTCTGGCCAAACCCTGCAGGCACTCCTaGGGTGTGTATTCTGTCCTC +
Preference number: 3 (lower is better)
Translates to: SSSIHCEHYPIPSSSLAKPCRHS*GVYSVL
Trigger: GAGGACAGAATACACACCCAAGGAGTGCCTGCAGGG...TTTGGCCAGAGAGGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
3UTR CCA 72 bp AAGGCTTCAGAGCAGGGCATTTTGGTAACCTGGCCATaGTCCCTGCAGCTCCTCTTGGCTAAAGGTCCCGGG +
Preference number: 3 (lower is better)
Translates to: KASEQGILVTWP*SLQLLLAKGPG
Trigger: CCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTACCAAAATGCCCTGCTCTGAAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 72 bp AGAGAAGAGGAGAGGAAGAGTTCCAGTTCCATCCACTaGGAGCACTACCCCATACCCAGCTCCTCTCTGGCC +
Preference number: 3 (lower is better)
Translates to: REEERKSSSSIH*EHYPIPSSSLA
Trigger: GGCCAGAGAGGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTCCTCTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
3UTR CCA 72 bp CCCTCTGTGTCCTGCTCACTCTTCCAATCGCCTACCTaGCCTACTCAGCTCCCTCACACACTACCCTTTCTC +
Preference number: 3 (lower is better)
Translates to: PSVSCSLFQSPT*PTQLPHTLPFL
Trigger: GAGAAAGGGTAGTGTGTGAGGGAGCTGAGTAGGCCAGGTAGGCGATTGGAAGAGTGAGCAGGACACAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 72 bp CCGAACCAAAGCCCACAACACAGCATAGGCCAGTCCTaGAGTACCCATCACCCTCACACCCATGGGATTCAG +
Preference number: 3 (lower is better)
Translates to: PNQSPQHSIGQS*STHHPHTHGIQ
Trigger: CTGAATCCCATGGGTGTGAGGGTGATGGGTACTCCAGGACTGGCCTATGCTGTGTTGTGGGCTTTGGTTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 72 bp GGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTAACCTaGCCATGGTCCCTGCAGCTCCTCTTGGCTAAAGGT +
Preference number: 3 (lower is better)
Translates to: GVKASEQGILVT*PWSLQLLLAKG
Trigger: ACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTACCAAAATGCCCTGCTCTGAAGCCTTGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CAA 90 bp CCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGACACCTGAGGCCAATTaGGTCCCACGTTCTGGCGAG +
Preference number: 3 (lower is better)
Translates to: PSPLPFQKTASLSTQVSRTPEAN*VPRSGE
Trigger: CTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGT...CCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR TCA 72 bp GCCCTCTCTCAAAAGCAGAAGTCTGGACTCAACACCTaGGGCCAATTTGGTCCCACGTTCTGGCGAGCACAA +
Preference number: 3 (lower is better)
Translates to: ALSQKQKSGLNT*GQFGPTFWRAQ
Trigger: TTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGAGTCCAGACTTCTGCTTTTGAGAGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR TCA 72 bp CACCTCCCACGCCATGACTCAGATGTAAAAAGTCCCTaGCAACATTCCCCTGCAGGCACTCCTTGGGTGTGT +
Preference number: 3 (lower is better)
Translates to: HLPRHDSDVKSP*QHSPAGTPWVC
Trigger: ACACACCCAAGGAGTGCCTGCAGGGGAATGTTGTCAGGGACTTTTTACATCTGAGTCATGGCGTGGGAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557236.6
3UTR TCA 72 bp ACAGCTGCTTATGTAAGTCCACCTTCCTCAGGGCTGTaGAGCAAGTTCCAGGTCGTTTCATGTGCCCACACC +
Preference number: 3 (lower is better)
Translates to: TAAYVSPPSSGL*SKFQVVSCAHT
Trigger: GGTGTGGGCACATGAAACGACCTGGAACTTGCTTCACAGCCCTGAGGAAGGTGGACTTACATAAGCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 72 bp AGGCCAGTCCTGGAGTACCCATCACCCTCACACCCATaGGATTCAGATCTGAAATGGTCATCTCAAGGCATC +
Preference number: 3 (lower is better)
Translates to: RPVLEYPSPSHP*DSDLKWSSQGI
Trigger: GATGCCTTGAGATGACCATTTCAGATCTGAATCCCATGGGTGTGAGGGTGATGGGTACTCCAGGACTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 72 bp AAAGCAGAAGTCTGGACTCAACACCTGAGGCCAATTTaGTCCCACGTTCTGGCGAGCACAACTACGTTGCCA +
Preference number: 3 (lower is better)
Translates to: KAEVWTQHLRPI*SHVLASTTTLP
Trigger: TGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGAGTCCAGACTTCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 72 bp AGGGGGATGATGAAGGAACAAGGCCAGCTGCAGAACTaGTCTTCTCTCCAAAGCCTTGCCAATCACTTTCTG +
Preference number: 3 (lower is better)
Translates to: RGMMKEQGQLQN*SSLQSLANHFL
Trigger: CAGAAAGTGATTGGCAAGGCTTTGGAGAGAAGAGCAGTTCTGCAGCTGGCCTTGTTCCTTCATCATCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 72 bp TCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTaGCCACTGTGGTCCCATCTAAGCTATGCTTCTGGG +
Preference number: 3 (lower is better)
Translates to: SLQAKKGRTGQN*PLWSHLSYASG
Trigger: CCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 72 bp GCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTaGTCCCATCTAAGCTATGCTTCTGGGAATCCAGAC +
Preference number: 3 (lower is better)
Translates to: AKKGRTGQNCPL*SHLSYASGNPD
Trigger: GTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CAA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAACTTCTCTCCAAAGCCTaGCCAATCACTTTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: GPTFWRAQLRCHILGPSELLSKA*PITFWK
Trigger: TTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAAG...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CAA 90 bp GCTGGCTCTGAGTTTCTGGTGTCAGCATACTCACAACAAGACCAAGTGGCACATAGCAATCTTAGCACCTaGGAAAGTGCAGCAGTGAGG +
Preference number: 3 (lower is better)
Translates to: AGSEFLVSAYSQQDQVAHSNLST*ESAAVR
Trigger: CCTCACTGCTGCACTTTCCAAGGTGCTAAGATTGCT...ATGTGCCACTTGGTCTTGTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 72 bp GAGGAGGGACAGAGAACTGCCCCTAGTTCTTGCCATTaGAAGAGGGAATGTTTTCTCCTTGAGGAATCCCAT +
Preference number: 3 (lower is better)
Translates to: EEGQRTAPSSCH*KRECFLLEESH
Trigger: ATGGGATTCCTCAAGGAGAAAACATTCCCTCTTGCAATGGCAAGAACTAGGGGCAGTTCTCTGTCCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 72 bp ACTGCTCTTCTCTCCAAAGCCTTGCCAATCACTTTCTaGAAAGAAGCAGCAGAGCCCTCGGTCTGGATACAA +
Preference number: 3 (lower is better)
Translates to: TALLSKALPITF*KEAAEPSVWIQ
Trigger: TTGTATCCAGACCGAGGGCTCTGCTGCTTCTTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAAGAGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 72 bp AGTTTCTGGTGTCAGCATACTCACAACAAGACCAAGTaGCACATGCAGCCTACCACCTCCCCTAGAAATACC +
Preference number: 3 (lower is better)
Translates to: SFWCQHTHNKTK*HMQPTTSPRNT
Trigger: GGTATTTCTAGGGGAGGTGGTAGGCTGCATGTGCCACTTGGTCTTGTTGTGAGTATGCTGACACCAGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 72 bp GCTCCATACCTGGGGAAGGAAGCACAGACTCCAATTTaGAGCCGATGGTCTAGTCAGTGGTTTTCCAACTTT +
Preference number: 3 (lower is better)
Translates to: APYLGKEAQTPI*SRWSSQWFSNF
Trigger: AAAGTTGGAAAACCACTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGCTTCCTTCCCCAGGTATGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CAA 90 bp CAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCCTTCTCTCCAAAGCCTaGCCAATCACTTTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: QTKPFTLSENSLSFHPGVLLSKA*PITFWK
Trigger: TTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAAG...GACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR TCA 72 bp AGTACCCATCACCCTCACACCCATGGGATTCAGATCTaGAATGGTCATCTCAAGGCATCAACAGTCTCACTG +
Preference number: 3 (lower is better)
Translates to: STHHPHTHGIQI*NGHLKASTVSL
Trigger: CAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATCCCATGGGTGTGAGGGTGATGGGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 72 bp AGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATaGTTCTGGGAATCCAGACCAAGCCCTTTACCCTTT +
Preference number: 3 (lower is better)
Translates to: RSKLPTVVPSKL*FWESRPSPLPF
Trigger: AAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 72 bp CCATCACCCTCACACCCATGGGATTCAGATCTGAAATaGTCATCTCAAGGCATCAACAGTCTCACTGAGACA +
Preference number: 3 (lower is better)
Translates to: PSPSHPWDSDLK*SSQGINSLTET
Trigger: TGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATCCCATGGGTGTGAGGGTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR-3UTR CAA 90 bp AATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCTGACAGATCAGAGCAGGGCATTTaGGTAACCTGGCCTACTCAG +
Preference number: 3 (lower is better)
Translates to: NPKELYGSRRESLVFPDRSEQGI*VTWPTQ
Trigger: CTGAGTAGGCCAGGTTACCAAAATGCCCTGCTCTGA...TCTGTCAGGGAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556100.3
3UTR TCA 72 bp GCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTaGAAATCTCCAAGAAGAGTCAACCATGGTCTAGCT +
Preference number: 3 (lower is better)
Translates to: ASTTTLPHSRTK*KSPRRVNHGLA
Trigger: AGCTAGACCATGGTTGACTCTTCTTGGAGATTTTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 72 bp CGTTCCCTAAATCCCACTCATCTAATGGAATACAGCTaGTTATGTAAGTCCACCTTCCTCAGGGCTGTGAAG +
Preference number: 3 (lower is better)
Translates to: RSLNPTHLMEYS*LCKSTFLRAVK
Trigger: CTTCACAGCCCTGAGGAAGGTGGACTTACATAAGCAGCTGTATTCCATTAGATGAGTGGGATTTAGGGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 72 bp CAATTTGGTCCCACGTTCTGGCGAGCACAACTACGTTaGCACATTCTAGGACCAAGTGAAAATCTCCAAGAA +
Preference number: 3 (lower is better)
Translates to: QFGPTFWRAQLR*HILGPSENLQE
Trigger: TTCTTGGAGATTTTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR GCA 72 bp TCCAGTGAATTCCATCCTTTCCTTGGCGAAAAATTCTaGTCAGAACTAGCATCCTTTGCCAAGGCTTGCCTG +
Preference number: 3 (lower is better)
Translates to: SSEFHPFLGEKF*SELASFAKACL
Trigger: CAGGCAAGCCTTGGCAAAGGATGCTAGTTCTGAGCAGAATTTTTCGCCAAGGAAAGGATGGAATTCACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557236.6
3UTR CCA 72 bp AAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTaGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAA +
Preference number: 3 (lower is better)
Translates to: KLPTVVPSKLCF*ESRPSPLPFQK
Trigger: TTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CCA 72 bp GAAAGAAGGAGAAAGGGATATCAGGAGAGGAAAGAGTaGAGAGAAGAGGAGAGGAAGAGTTCCAGTTCCATC +
Preference number: 3 (lower is better)
Translates to: ERRRKGYQERKE*REEERKSSSSI
Trigger: GATGGAACTGGAACTCTTCCTCTCCTCTTCTCTCCACTCTTTCCTCTCCTGATATCCCTTTCTCCTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557236.6
3UTR CCA 72 bp ATGGATTTAAAAATTGGGAACCATACTCAGCCTTCTTaGCCAAGAGCTAATCCCAAGGAACTATATGGCTCT +
Preference number: 3 (lower is better)
Translates to: MDLKIGNHTQPS*PRANPKELYGS
Trigger: AGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAAATCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAATCCTCCTGGCCAGCGTaGAGCCCGAGTCGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQSSWPA*SPSRGR
Trigger: GCGGCCCCGACTCGGGCTCCACGCTGGCCAGGAGGA...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679219.1
CDS-3UTR GCA 90 bp CTACCTAAGCCTCCACCCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCGCCCGCATGGCTTGGTaGAGCGGGTCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPKPPPIQAQQPCPSIRAARMAW*SGSAAG
Trigger: CCCAGCAGCTGACCCGCTGCACCAAGCCATGCGGGC...GGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGGGTGGAGGCTTAGGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAAGCCGGGTCAGGCCGCTaGCGGGATCCGGGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: GPTFWRAQLRCHILGPSEAGSGR*RDPGRF
Trigger: GAAACGGCCCGGATCCCGGCAGCGGCCTGACCCGGC...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250405.10
CDS-3UTR GCA 90 bp AAGAGGAGAGGAAGAGTTCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCCGGGTCAGGCCGCTaGCGGGATCCGGGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: KRRGRVPVPSTASTTPYPAGSGR*RDPGRF
Trigger: GAAACGGCCCGGATCCCGGCAGCGGCCTGACCCGGC...TGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp GTAACCTGGCCATGGTCCCTGCAGCTCCTCTTGGCTAAAGGTCCCGGGGAATGCGGCGGCCAGCCGGGATaGCAGCTCTTAAGACACAGC +
Preference number: 4 (lower is better)
Translates to: VTWPWSLQLLLAKGPGECGGQPG*QLLRHS
Trigger: GCTGTGTCTTAAGAGCTGCCATCCCGGCTGGCCGCC...GCATTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GTAACCTGGCCATGGTCCCTGCAGCTCCTCTTGGCTAAAGGTCCCGGGGAATGCGAAGCGTTGTTGGGCTaGGCCTGGGGTCACATGCAG +
Preference number: 4 (lower is better)
Translates to: VTWPWSLQLLLAKGPGECEALLG*AWGHMQ
Trigger: CTGCATGTGACCCCAGGCTCAGCCCAACAACGCTTC...GCATTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CTACCTAAGCCTCCACCCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGCACTGTCCTCACTaGTGCCCAGTTCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LPKPPPIQAQQPCPSIRAQHCPH*CPVPLP
Trigger: CGGGAGGGGAACTGGGCATCAGTGAGGACAGTGCTG...GGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGGGTGGAGGCTTAGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCCACGGGTCAGGCCGCTaGCGGGATCCGGGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPIHGSGR*RDPGRF
Trigger: GAAACGGCCCGGATCCCGGCAGCGGCCTGACCCGTG...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000678311.1
ENST00000679000.1
CDS-3UTR CCA 90 bp AAGAGGAGAGGAAGAGTTCCAGTTCCATCCACTGCGAGCACTACCCCATACCCACAGAGCCCGTGTGTCTaGGGCCGAGGCTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: KRRGRVPVPSTASTTPYPQSPCV*GRGWGR
Trigger: GCGACCCCAGCCTCGGCCCCAGACACACGGGCTCTG...TGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR GCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAAGCCACCATCCACTCCTaGACTTGTCCCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQATIHS*TCPTSG
Trigger: ACCACTGGTGGGACAAGTGCAGGAGTGGATGGTGGC...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGCACACCAGCATGCGTGCAGCCACCATCCACTCCTaGACTTGTCCCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PITTRFARQPSMHTSMRAATIHS*TCPTSG
Trigger: ACCACTGGTGGGACAAGTGCAGGAGTGGATGGTGGC...TGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTACCAGGGCCCCCAGTaGCACGGCCCCCGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SGVSLQAKKGRTGQNCPLYQGPQ*HGPRQH
Trigger: GTGCTGACGGGGGCCGTGGCACTGGGGGCCCTGGTA...CAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTTCCTCCTGGCCAGCGTaGAGCCGGGTCAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCSSWPA*SRVRPL
Trigger: CAGCGGCCTGACCCGGCTCCACGCTGGCCAGGAGGA...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250405.10
ENST00000556100.3
CDS-3UTR CCA 90 bp TCTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAATCCTCCTGGCCAGCGTaGAGCCGGGTCAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SQSNSIQTGRLSPVPHSQSSWPA*SRVRPL
Trigger: CAGCGGCCTGACCCGGCTCCACGCTGGCCAGGAGGA...TTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp TCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCTCCTCTCTGGCCAAACAAGGAGCCCCCAGCTaGGGCCTTTCATCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSIHCEHYPIPSSSLAKQGAPS*GLSSSW
Trigger: CCAGGAGGATGAAAGGCCCCAGCTGGGGGCTCCTTG...TTTGGCCAGAGAGGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp CCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCAGAGCCCGTGTGTCTaGGGCCGAGGCTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: PSPLPFQKTASLSTQVSRQSPCV*GRGWGR
Trigger: GCGACCCCAGCCTCGGCCCCAGACACACGGGCTCTG...CCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCTCCTCTCTGGCCAAACAGCCCCCACTGCTGTaGATCCAGTCAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSSIHCEHYPIPSSSLAKQPPLL*IQSASC
Trigger: GCAGCTGGCTGACTGGATCCACAGCAGTGGGGGCTG...TTTGGCCAGAGAGGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp CCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGCACACCAGCATGCGTGCAACACCTAGCCCCACCTaGCCCTGGACTTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: PITTRFARQPSMHTSMRATPSPT*PWTFTC
Trigger: GCAAGTGAAAGTCCAGGGCCAGGTGGGGCTAGGTGT...TGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAATGCAGCAGTGAGGTCTaGCTCAGGGCATGCATCTGG +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQCSSEV*LRACIW
Trigger: CCAGATGCATGCCCTGAGCCAGACCTCACTGCTGCA...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCTCCTCTCTGGCCAAACATCGGAGACCTGGGTaGAGCGTTGTTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSSIHCEHYPIPSSSLAKHRRPG*SVVGLS
Trigger: GCTCAGCCCAACAACGCTTCACCCAGGTCTCCGATG...TTTGGCCAGAGAGGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR TCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCCCCCGTATAGAGCTGTaGACTCCGCCCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPIPRIEL*TPPSPH
Trigger: GTGGGGGCTGGGCGGAGTTCACAGCTCTATACGGGG...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAATCTGGACTCAACACCTaGGGCCAATTTGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQSGLNT*GQFGPT
Trigger: CGTGGGACCAAATTGGCCTCAGGTGTTGAGTCCAGA...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGCCCGCATGGCTTGGTaGAGCGGGTCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ENSLSFHPGVKASEQGILARMAW*SGSAAG
Trigger: CCCAGCAGCTGACCCGCTGCACCAAGCCATGCGGGC...CAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTCAAGGCATCAACAGTCTCACTGAGACACAGTGTGGGACCCAGACTGTATTCTACCAGGGCCCCCAGTaGCACGGCCCCCGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SQGINSLTETQCGTQTVFYQGPQ*HGPRQH
Trigger: GTGCTGACGGGGGCCGTGGCACTGGGGGCCCTGGTA...GAATACAGTCTGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AATAAGTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTTACCAGGGCCCCCAGTaGCACGGCCCCCGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: NKWGVGLIIAGPSCPTSAYQGPQ*HGPRQH
Trigger: GTGCTGACGGGGGCCGTGGCACTGGGGGCCCTGGTA...AGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCACTTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTACCAGGGCCCCCAGTaGCACGGCCCCCGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: NPDQALYPFRKQPLFPPRYQGPQ*HGPRQH
Trigger: GTGCTGACGGGGGCCGTGGCACTGGGGGCCCTGGTA...CCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAACATCACCACCAGATTTaGCAGGCAGCCCAGCATGCA +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQHHHQI*QAAQHA
Trigger: TGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATG...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAAAGACCAAGTGGCACATaGAGCCTACCACCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQRPSGT*SLPPPL
Trigger: TAGGGGAGGTGGTAGGCTGCATGTGCCACTTGGTCT...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGCACACCAGCATGCGTGCATGTTTGAGGGCAAATTaGCCAGCCTGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PITTRFARQPSMHTSMRACLRAN*PACSAP
Trigger: GGGAGCTGAGCAGGCTGGGCAATTTGCCCTCAAACA...TGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GTAACCTGGCCATGGTCCCTGCAGCTCCTCTTGGCTAAAGGTCCCGGGGAATGCTGTTTGAGGGCAAATTaGCCAGCCTGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VTWPWSLQLLLAKGPGECCLRAN*PACSAP
Trigger: GGGAGCTGAGCAGGCTGGGCAATTTGCCCTCAAACA...GCATTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CTACCTAAGCCTCCACCCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCATCGCAGGACCGAGTTaGCCTACTTCCGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LPKPPPIQAQQPCPSIRAIAGPS*PTSAPS
Trigger: GGAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGAT...GGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGGGTGGAGGCTTAGGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCCACGGGTCAGGCCGCTaGCGGGATCCGGGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGHGSGR*RDPGRF
Trigger: GAAACGGCCCGGATCCCGGCAGCGGCCTGACCCGTG...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000678311.1
ENST00000679000.1
CDS-3UTR CCA 90 bp GCTGGCTCTGAGTTTCTGGTGTCAGCATACTCACAACAAGACCAAGTGGCACATTCCTCCTGGCCAGCGTaGAGCCGGGTCAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AGSEFLVSAYSQQDQVAHSSWPA*SRVRPL
Trigger: CAGCGGCCTGACCCGGCTCCACGCTGGCCAGGAGGA...ATGTGCCACTTGGTCTTGTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250405.10
CDS-3UTR CCA 90 bp GTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCCTTCCAAGGAGCCCCCAGCTaGGGCCTTTCATCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VGSGINNRRTELPYFRSFQGAPS*GLSSSW
Trigger: CCAGGAGGATGAAAGGCCCCAGCTGGGGGCTCCTTG...GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GAGAGGAAGAGTTCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCTCCAAGACACAGCACTGGTaGCAAGGAGCCCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ERKSSSSIHCEHYPIPSSKTQHW*QGAPSW
Trigger: CCAGCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTT...GGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp AATAAGTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCAGAGCCCGTGTGTCTaGGGCCGAGGCTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: NKWGVGLIIAGPSCPTSAQSPCV*GRGWGR
Trigger: GCGACCCCAGCCTCGGCCCCAGACACACGGGCTCTG...AGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCACTTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCCAGAGCCCGTGTGTCTaGGGCCGAGGCTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: WSHLSYASGNPDQALYPFQSPCV*GRGWGR
Trigger: GCGACCCCAGCCTCGGCCCCAGACACACGGGCTCTG...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCACAGAGCCCGTGTGTCTaGGGCCGAGGCTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: GIQTKPFTLSENSLSFHPQSPCV*GRGWGR
Trigger: GCGACCCCAGCCTCGGCCCCAGACACACGGGCTCTG...TGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCCACTGCGAGCACTACCCCATACCCAGCTCCTCTCTGGCCAAAGCTCTTCTCCACTGCATGGCAGCCCTaGAGTGCAGAGTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: STASTTPYPAPLWPKLFSTAWQP*SAESRH
Trigger: ATGCCTGGACTCTGCACTCCAGGGCTGCCATGCAGT...GGAGAAGAGCTTTGGCCAGAGAGGAGCTGGGTATGGGGTAGTGCTCGCAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp GTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCCTTCGGCCTTTCATCCTCCTaGCCAGCGTGGAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VGSGINNRRTELPYFRSFGLSSS*PAWSPQ
Trigger: CTGAGGGCTCCACGCTGGCCAGGAGGATGAAAGGCC...GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679000.1
CDS-3UTR TCA 90 bp TCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGCCCCGTATAGAGCTGTaGACTCCGCCCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SGVSLQAKKGRTGQNCPLPRIEL*TPPSPH
Trigger: GTGGGGGCTGGGCGGAGTTCACAGCTCTATACGGGG...CAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCACCCCGTATAGAGCTGTaGACTCCGCCCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: FQKTASLSTQVSRLQSRAPRIEL*TPPSPH
Trigger: GTGGGGGCTGGGCGGAGTTCACAGCTCTATACGGGG...TGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGCACACCAGCATGCGTGCAGTCCCTAGTTTTCCCTaGCAGAAGAGTCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PITTRFARQPSMHTSMRAVPSFP*QKSLWG
Trigger: ACCCCAGAGACTCTTCTGTCAGGGAAAACTAGGGAC...TGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TCCACTGCGAGCACTACCCCATACCCAGCTCCTCTCTGGCCAAAGCTCTTCTCCGTGCAGAGCGGCAATTaGGAAGCTTCTTACCCAGCC +
Preference number: 4 (lower is better)
Translates to: STASTTPYPAPLWPKLFSVQSGN*EASYPA
Trigger: GGCTGGGTAAGAAGCTTCTCAATTGCCGCTCTGCAC...GGAGAAGAGCTTTGGCCAGAGAGGAGCTGGGTATGGGGTAGTGCTCGCAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR GCA 90 bp TATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTACCAGGGCCCCCAGTaGCACGGCCCCCGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: YASGNPDQALYPFRKQPLYQGPQ*HGPRQH
Trigger: GTGCTGACGGGGGCCGTGGCACTGGGGGCCCTGGTA...GAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCCCAGGCAGCCCAGCATaGACACCAGCATGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPIPGSPA*TPACVH
Trigger: GTGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGG...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAAGGCCAGCTGCAGAACTaGTCTTCTCTCCAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQGQLQN*SSLQSL
Trigger: AAGGCTTTGGAGAGAAGAGCAGTTCTGCAGCTGGCC...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCAAAGCCCACAACACAGCATAGGCCAGTCCTGGAGTACCCATCACCCTCACACATCGCAGGACCGAGTTaGCCTACTTCCGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PKPTTQHRPVLEYPSPSHIAGPS*PTSAPS
Trigger: GGAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGAT...GTGTGAGGGTGATGGGTACTCCAGGACTGGCCTATGCTGTGTTGTGGGCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCTCCTCTCTGGCCAAATCCTTTGCCAAGGCTTaGCTGACCACCACCCATCCC +
Preference number: 4 (lower is better)
Translates to: SSSIHCEHYPIPSSSLAKSFAKA*LTTTHP
Trigger: GGGATGGGTGGTGGTCAGGCAAGCCTTGGCAAAGGA...TTTGGCCAGAGAGGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR GCA 90 bp TTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCACCAACCCCGCCCGCCTaGCAGGTTAGGGATCTCACG +
Preference number: 4 (lower is better)
Translates to: FQKTASLSTQVSRLQSRAPTPPA*QVRDLT
Trigger: CGTGAGATCCCTAACCTGGCAGGCGGGCGGGGTTGG...TGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678311.1
ENST00000679000.1
CDS-3UTR CCA 90 bp GTCTCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCAGGCCTTTCATCCTCCTaGCCAGCGTGGAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: VSGVSLQAKKGRTGQNCPGLSSS*PAWSRV
Trigger: GACCCGGCTCCACGCTGGCCAGGAGGATGAAAGGCC...TGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250405.10
ENST00000556100.3
CDS-3UTR CCA 90 bp GAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGGCCTTTCATCCTCCTaGCCAGCGTGGAGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: ENSLSFHPGVKASEQGILGLSSS*PAWSRV
Trigger: GACCCGGCTCCACGCTGGCCAGGAGGATGAAAGGCC...CAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250405.10
ENST00000556100.3
CDS-3UTR CCA 90 bp GGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGCAAGGAGCCCCCAGCTaGGGCCTTTCATCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRTGQNCPLWSHLSYASGQGAPS*GLSSSW
Trigger: CCAGGAGGATGAAAGGCCCCAGCTGGGGGCTCCTTG...CCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GAGAGGAAGAGTTCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCTCCCTTAAGACACAGCACTaGTGGCAAGGAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ERKSSSSIHCEHYPIPSSLKTQH*WQGAPS
Trigger: GCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTTAAG...GGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp CCAAAGCCCACAACACAGCATAGGCCAGTCCTGGAGTACCCATCACCCTCACACCTTAAGACACAGCACTaGTGGCAAGGAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PKPTTQHRPVLEYPSPSHLKTQH*WQGAPS
Trigger: GCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTTAAG...GTGTGAGGGTGATGGGTACTCCAGGACTGGCCTATGCTGTGTTGTGGGCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTAACGGCGGCCAGCCGGGATaGCAGCTCTTAAGACACAGC +
Preference number: 4 (lower is better)
Translates to: QPLFPPRCQGFRAGHFGNGGQPG*QLLRHS
Trigger: GCTGTGTCTTAAGAGCTGCCATCCCGGCTGGCCGCC...GTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAAGGCGGCCAGCCGGGATaGCAGCTCTTAAGACACAGC +
Preference number: 4 (lower is better)
Translates to: GPTFWRAQLRCHILGPSEGGQPG*QLLRHS
Trigger: GCTGTGTCTTAAGAGCTGCCATCCCGGCTGGCCGCC...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGGCTGCCCGCATGGCTTaGTGCAGCGGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRPSPLPFQKTASLSTQVAARMA*CSGSAA
Trigger: AGCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGC...CACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCAGCTGCCCGCATGGCTTaGTGCAGCGGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FQKTASLSTQVSRLQSRAAARMA*CSGSAA
Trigger: AGCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGC...TGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGCTGCCCGCATGGCTTaGTGCAGCGGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCAARMA*CSGSAA
Trigger: AGCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGC...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAAAGTTCATCGGAGACCTaGGTGAAGCGTTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQSSSET*VKRCWA
Trigger: AGCCCAACAACGCTTCACCCAGGTCTCCGATGAACT...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTTTTCTCCTTGAGGAATCCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGCTGTTCCTGCTCTCCTaGCCCCCAGCCACACCTAGC +
Preference number: 4 (lower is better)
Translates to: VFSLRNPITTRFARQPSMLFLLS*PPATPS
Trigger: GCTAGGTGTGGCTGGGGGCCAGGAGAGCAGGAACAG...CATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGGATTCCTCAAGGAGAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGAGTGGGAGAGGAGGGTaGCAGGCAGGTCCGGCTACC +
Preference number: 4 (lower is better)
Translates to: PSPLPFQKTASLSTQVSRSGRGG*QAGPAT
Trigger: GGTAGCCGGACCTGCCTGCCACCCTCCTCTCCCACT...CCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp ACCACAGGCAGGGTTCTAGAGCACTGTGTCAGAAAGTTAGCATTGGAGAGCAGCAGTGGGAGAGGAGGGTaGCAGGCAGGTCCGGCTACC +
Preference number: 4 (lower is better)
Translates to: TTGRVLEHCVRKLALESSSGRGG*QAGPAT
Trigger: GGTAGCCGGACCTGCCTGCCACCCTCCTCTCCCACT...GCTGCTCTCCAATGCTAACTTTCTGACACAGTGCTCTAGAACCCTGCCTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAAGGGGTCACATGCAGCTaGGCCGCCAGATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GPTFWRAQLRCHILGPSEGVTCS*AARSEK
Trigger: CTTCTCTGATCTGGCGGCTCAGCTGCATGTGACCCC...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAACGGGGTCACATGCAGCTaGGCCGCCAGATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LNLIPSRRGDSAPYLIPNGVTCS*AARSEK
Trigger: CTTCTCTGATCTGGCGGCTCAGCTGCATGTGACCCC...GTTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR TCA 90 bp GTTTTCTCCTTGAGGAATCCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGGAAGCGTTGTTGGGCTaGGCCTGGGGTCACATGCAG +
Preference number: 4 (lower is better)
Translates to: VFSLRNPITTRFARQPSMEALLG*AWGHMQ
Trigger: CTGCATGTGACCCCAGGCTCAGCCCAACAACGCTTC...CATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGGATTCCTCAAGGAGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCCATCGGAGACCTGGGTaGAGCGTTGTTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPIHRRPG*SVVGLS
Trigger: GCTCAGCCCAACAACGCTTCACCCAGGTCTCCGATG...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGAACCCCGTATAGAGCTGTaGACTCCGCCCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QDRSKLPTVVPSKLCFWEPRIEL*TPPSPH
Trigger: GTGGGGGCTGGGCGGAGTTCACAGCTCTATACGGGG...TTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CTACCTAAGCCTCCACCCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCATCAACAGTCTCACTaGGACACAGTGTGGGACCCA +
Preference number: 4 (lower is better)
Translates to: LPKPPPIQAQQPCPSIRAHQQSH*DTVWDP
Trigger: TGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATG...GGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGGGTGGAGGCTTAGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GAGAGGAAGAGTTCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCTCCCTCTGCTTGGGACCATaGGCCCATCCAGTGTTGACT +
Preference number: 4 (lower is better)
Translates to: ERKSSSSIHCEHYPIPSSLCLGP*AHPVLT
Trigger: AGTCAACACTGGATGGGCTCATGGTCCCAAGCAGAG...GGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR TCA 90 bp TCCACTGCGAGCACTACCCCATACCCAGCTCCTCTCTGGCCAAAGCTCTTCTCCCCACTCTGCCTCCAGTaGATTCCATCCTTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: STASTTPYPAPLWPKLFSPLCLQ*IPSFPW
Trigger: CCAAGGAAAGGATGGAATTCACTGGAGGCAGAGTGG...GGAGAAGAGCTTTGGCCAGAGAGGAGCTGGGTATGGGGTAGTGCTCGCAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR TCA 90 bp GGCATCTCTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATCCCCGTATAGAGCTGTaGACTCCGCCTGTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GISQSNSIQTGRLSPVPHPRIEL*TPPVGE
Trigger: CTCTCCCACAGGCGGAGTTCACAGCTCTATACGGGG...ATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAGAGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR GCA 90 bp ATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGCCGGGTCAGGCCGCTaGCGGGATCCGGGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: IGNHTQPSWPRANPKELYAGSGR*RDPGRF
Trigger: GAAACGGCCCGGATCCCGGCAGCGGCCTGACCCGGC...ATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250405.10
ENST00000556100.3
CDS-3UTR GCA 90 bp AAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCGCCCGCATGGCTTGGTaGAGCGGGTCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KLCFWESRPSPLPFQKTAARMAW*SGSAAG
Trigger: CCCAGCAGCTGACCCGCTGCACCAAGCCATGCGGGC...GGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAACCCAGATCAGAGAAGGTaGGCCGGAAGCGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: LNLIPSRRGDSAPYLIPNPDQRR*AGSGSR
Trigger: TCGAGACCCGCTTCCGGCGCACCTTCTCTGATCTGG...GTTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR GCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCCCAGATCAGAGAAGGTaGGCCGGAAGCGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPIPDQRR*AGSGSR
Trigger: TCGAGACCCGCTTCCGGCGCACCTTCTCTGATCTGG...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTAACCCAGATCAGAGAAGGTaGGCCGGAAGCGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: QPLFPPRCQGFRAGHFGNPDQRR*AGSGSR
Trigger: TCGAGACCCGCTTCCGGCGCACCTTCTCTGATCTGG...GTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCCCGCCCAGCCCCCACTaGTGTGGATCCAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: WSHLSYASGNPDQALYPFPPSPH*CGSSQP
Trigger: TGGCTGACTGGATCCACAGCAGTGGGGGCTGGGCGG...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AATAAGTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCCGCCCAGCCCCCACTaGTGTGGATCCAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: NKWGVGLIIAGPSCPTSAPPSPH*CGSSQP
Trigger: TGGCTGACTGGATCCACAGCAGTGGGGGCTGGGCGG...AGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCACTTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GTTTTCTCCTTGAGGAATCCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGGCACACCAGCATGCGTaGACATGCACACGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: VFSLRNPITTRFARQPSMAHQHA*TCTRVS
Trigger: GGACACGCGTGTGCATGTGCACGCATGCTGGTGTGC...CATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGGATTCCTCAAGGAGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAAGCACACCAGCATGCGTaGACATGCACACGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: GPTFWRAQLRCHILGPSEAHQHA*TCTRVS
Trigger: GGACACGCGTGTGCATGTGCACGCATGCTGGTGTGC...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCACCAGGCAGCCCAGCATaGACACCAGCATGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: FQKTASLSTQVSRLQSRAPGSPA*TPACVH
Trigger: GTGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGG...TGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp ACCTCCCCCAGCCCTGGAACGACTACATCTCCTGTGCCCCTAAACTTGCCAAAACAGGCTCAACAGCCCTaGCCTTCTATCAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: TSPSPGTTTSPVPLNLPKQAQQP*PSIRAQ
Trigger: CTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTG...TTTTGGCAAGTTTAGGGGCACAGGAGATGTAGTCGTTCCAGGGCTGGGGGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GTAACCTGGCCATGGTCCCTGCAGCTCCTCTTGGCTAAAGGTCCCGGGGAATGCACTCTAGAACCCATATaGCTGGCCCCTGATAAAGCC +
Preference number: 4 (lower is better)
Translates to: VTWPWSLQLLLAKGPGECTLEPI*LAPDKA
Trigger: GGCTTTATCAGGGGCCAGGCATATGGGTTCTAGAGT...GCATTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCACCAACCCCGCCCGCCTaGCAGGTTAGGGATCTCACG +
Preference number: 4 (lower is better)
Translates to: GIQTKPFTLSENSLSFHPPTPPA*QVRDLT
Trigger: CGTGAGATCCCTAACCTGGCAGGCGGGCGGGGTTGG...TGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000678311.1
ENST00000679000.1
CDS-3UTR CCA 90 bp GTTTTCTCCTTGAGGAATCCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGAAGACACAGCACTGGTaGCAAGGAGCCCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VFSLRNPITTRFARQPSMKTQHW*QGAPSW
Trigger: CCAGCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTT...CATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGGATTCCTCAAGGAGAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAAAAGACACAGCACTGGTaGCAAGGAGCCCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPTFWRAQLRCHILGPSEKTQHW*QGAPSW
Trigger: CCAGCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTT...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCCTTCCTTAAGACACAGCACTaGTGGCAAGGAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: VGSGINNRRTELPYFRSFLKTQH*WQGAPS
Trigger: GCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTTAAG...GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GCCCTACTTCCGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGGCGGCCAGCCGGGATaGCAGCTCTTAAGACACAGC +
Preference number: 4 (lower is better)
Translates to: ALLPLLPWPKQSPYLSLWGGQPG*QLLRHS
Trigger: GCTGTGTCTTAAGAGCTGCCATCCCGGCTGGCCGCC...CCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCGGAAGTAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAAGGCGGCCAGCCGGGATaGCAGCTCTTAAGACACAGC +
Preference number: 4 (lower is better)
Translates to: SQSNSIQTGRLSPVPHSQGGQPG*QLLRHS
Trigger: GCTGTGTCTTAAGAGCTGCCATCCCGGCTGGCCGCC...TTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp AGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTAACCTGGCCTACTCAGCTCCCTGGGTGAAGCGTTGTTaGGCTGAGCCTGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: RCQGFRAGHFGNLAYSAPWVKRC*AEPGVT
Trigger: TGTGACCCCAGGCTCAGCCCAACAACGCTTCACCCA...GGGAGCTGAGTAGGCCAGGTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556100.3
CDS-3UTR CCA 90 bp TCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGCAGCCCCCACTGCTGTaGATCCAGTCAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRPSPLPFQKTASLSTQVQPPLL*IQSASC
Trigger: GCAGCTGGCTGACTGGATCCACAGCAGTGGGGGCTG...CACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCAACACCTGAGGCCAATTTGGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACACCTAGCCCCACCTaGCCCTGGACTTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: STPEANLVPRSGEHNYVATPSPT*PWTFTC
Trigger: GCAAGTGAAAGTCCAGGGCCAGGTGGGGCTAGGTGT...GGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTCTCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTTCCTGCTCTCCTaGCCCCCAGCCACACCTAGC +
Preference number: 4 (lower is better)
Translates to: VSGVSLQAKKGRTGQNCPLFLLS*PPATPS
Trigger: GCTAGGTGTGGCTGGGGGCCAGGAGAGCAGGAACAG...TGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGCTGTTCCTGCTCTCCTaGCCCCCAGCCACACCTAGC +
Preference number: 4 (lower is better)
Translates to: SRPSPLPFQKTASLSTQVLFLLS*PPATPS
Trigger: GCTAGGTGTGGCTGGGGGCCAGGAGAGCAGGAACAG...CACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCCTTCCACCTCCCCCAGCCCTaGAACGACTACATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VGSGINNRRTELPYFRSFHLPQP*NDYISC
Trigger: ACAGGAGATGTAGTCGTTCCAGGGCTGGGGGAGGTG...GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGAAAGTGGGAGAGGAGGGTaGCAGGCAGGTCCGGCTACC +
Preference number: 4 (lower is better)
Translates to: QDRSKLPTVVPSKLCFWESGRGG*QAGPAT
Trigger: GGTAGCCGGACCTGCCTGCCACCCTCCTCTCCCACT...TTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAGTGGGAGAGGAGGGTaGCAGGCAGGTCCGGCTACC +
Preference number: 4 (lower is better)
Translates to: VPSKLCFWESRPSPLPFQSGRGG*QAGPAT
Trigger: GGTAGCCGGACCTGCCTGCCACCCTCCTCTCCCACT...CTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCTCAAGGCATCAACAGTCTCACTGAGACACAGTGTGGGACCCAGACTGTATTCTCCTCCTGGCCAGCGTaGAGCCCTCAGCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SQGINSLTETQCGTQTVFSSWPA*SPQPVS
Trigger: GGAGACTGGCTGAGGGCTCCACGCTGGCCAGGAGGA...GAATACAGTCTGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679000.1
3UTR CAA 72 bp TTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTaGGTAACCTGGCCATGGTCCCTGCAGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FHPGVKASEQGI*VTWPWSLQLLL
Trigger: CAAGAGGAGCTGCAGGGACCATGGCCAGGTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCGGGGTCACATGCAGCTaGGCCGCCAGATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLPWPKQSPYLSLWALESGVTCS*AARSEK
Trigger: CTTCTCTGATCTGGCGGCTCAGCTGCATGTGACCCC...GCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGGGGTCACATGCAGCTaGGCCGCCAGATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RSFLGLNKVPICPFGLWRGVTCS*AARSEK
Trigger: CTTCTCTGATCTGGCGGCTCAGCTGCATGTGACCCC...TCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGGGGGTCACATGCAGCTaGGCCGCCAGATCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SRPSPLPFQKTASLSTQVGVTCS*AARSEK
Trigger: CTTCTCTGATCTGGCGGCTCAGCTGCATGTGACCCC...CACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TCTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAAGAAGCGTTGTTGGGCTaGGCCTGGGGTCACATGCAG +
Preference number: 4 (lower is better)
Translates to: SQSNSIQTGRLSPVPHSQEALLG*AWGHMQ
Trigger: CTGCATGTGACCCCAGGCTCAGCCCAACAACGCTTC...TTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR TCA 90 bp GTCTCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCAGAAGCGTTGTTGGGCTaGGCCTGGGGTCACATGCAG +
Preference number: 4 (lower is better)
Translates to: VSGVSLQAKKGRTGQNCPEALLG*AWGHMQ
Trigger: CTGCATGTGACCCCAGGCTCAGCCCAACAACGCTTC...TGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCCAGCACTGTCCTCACTaGTGCCCAGTTCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGQHCPH*CPVPLP
Trigger: CGGGAGGGGAACTGGGCATCAGTGAGGACAGTGCTG...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp ACCTCCCCCAGCCCTGGAACGACTACATCTCCTGTGCCCCTAAACTTGCCAAAACCTTCCTCAGGGCTGTaGAGCAAGTTCCAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: TSPSPGTTTSPVPLNLPKPSSGL*SKFQVV
Trigger: AACGACCTGGAACTTGCTTCACAGCCCTGAGGAAGG...TTTTGGCAAGTTTAGGGGCACAGGAGATGTAGTCGTTCCAGGGCTGGGGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGGCACCATTGTGCCTaGGTGGGAGAGGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: WSHLSYASGNPDQALYPFRHHCA*VGEEGG
Trigger: GCCACCCTCCTCTCCCACTCAGGCACAATGGTGCCT...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCAGGCACCATTGTGCCTaGGTGGGAGAGGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGRHHCA*VGEEGG
Trigger: GCCACCCTCCTCTCCCACTCAGGCACAATGGTGCCT...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCCTTCTCTGGACTCAACACCTaGGGCCAATTTGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: VGSGINNRRTELPYFRSFSGLNT*GQFGPT
Trigger: CGTGGGACCAAATTGGCCTCAGGTGTTGAGTCCAGA...GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CCAAAGCCCACAACACAGCATAGGCCAGTCCTGGAGTACCCATCACCCTCACACGCCACAAGCTGGCTCTaGGTTTCTGGTGTCAGCATA +
Preference number: 4 (lower is better)
Translates to: PKPTTQHRPVLEYPSPSHATSWL*VSGVSI
Trigger: TATGCTGACACCAGAAACTCAGAGCCAGCTTGTGGC...GTGTGAGGGTGATGGGTACTCCAGGACTGGCCTATGCTGTGTTGTGGGCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCTCCTCTCTGGCCAAACCACCTCCCACGCCATaGCTCAGATGTAAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: SSSIHCEHYPIPSSSLAKPPPTP*LRCKKS
Trigger: GGACTTTTTACATCTGAGTCATGGCGTGGGAGGTGG...TTTGGCCAGAGAGGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR GCA 90 bp TTTCCTTGGCGAAAAATTCTGCTCAGAACTAGCATCCTTTGCCAAGGCTTGCCTGCCCGCATGGCTTGGTaGAGCGGGTCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPWRKILLRTSILCQGLPARMAW*SGSAAG
Trigger: CCCAGCAGCTGACCCGCTGCACCAAGCCATGCGGGC...AGGCAAGCCTTGGCAAAGGATGCTAGTTCTGAGCAGAATTTTTCGCCAAGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR GCA 90 bp CAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTAACGAACTCATCTCCAGCTaGCCGCATGGCTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QPLFPPRCQGFRAGHFGNELISS*PHGLVQ
Trigger: CTGCACCAAGCCATGCGGGCAGCTGGAGATGAGTTC...GTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GTCTCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACCAGATCAGAGAAGGTaGGCCGGAAGCGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: VSGVSLQAKKGRTGQNCPPDQRR*AGSGSR
Trigger: TCGAGACCCGCTTCCGGCGCACCTTCTCTGATCTGG...TGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGCCAGATCAGAGAAGGTaGGCCGGAAGCGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: ENSLSFHPGVKASEQGILPDQRR*AGSGSR
Trigger: TCGAGACCCGCTTCCGGCGCACCTTCTCTGATCTGG...CAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp ACCTGGGGAAGGAAGCACAGACTCCAATTTGGAGCCGATGGTCTAGTCAGTGGTGCCACCATCCACTCCTaGACTTGTCCCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: TWGRKHRLQFGADGLVSGATIHS*TCPTSG
Trigger: ACCACTGGTGGGACAAGTGCAGGAGTGGATGGTGGC...ACCACTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGCTTCCTTCCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp ACCTGGGGAAGGAAGCACAGACTCCAATTTGGAGCCGATGGTCTAGTCAGTGGTGCCCATCCTGTTCCATaGCCACCCATCCACCAACTC +
Preference number: 4 (lower is better)
Translates to: TWGRKHRLQFGADGLVSGAHPVP*PPIHQL
Trigger: GAGTTGGTGGATGGGTGGGCATGGAACAGGATGGGC...ACCACTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGCTTCCTTCCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTCAAGGCATCAACAGTCTCACTGAGACACAGTGTGGGACCCAGACTGTATTCCCAGGCAGCCCAGCATaGACACCAGCATGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: SQGINSLTETQCGTQTVFPGSPA*TPACVH
Trigger: GTGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGG...GAATACAGTCTGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCACCAGGCAGCCCAGCATaGACACCAGCATGCGTGCAC +
Preference number: 4 (lower is better)
Translates to: GIQTKPFTLSENSLSFHPPGSPA*TPACVH
Trigger: GTGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGG...TGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp ACCTGGGGAAGGAAGCACAGACTCCAATTTGGAGCCGATGGTCTAGTCAGTGGTCCTGGCCATGGTCCCTaGAGCTCCTCTTGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: TWGRKHRLQFGADGLVSGPGHGP*SSSWLK
Trigger: CTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGG...ACCACTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGCTTCCTTCCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAAAGGACAGGTCAAAATTaGCCACTGTGGTCCCATCTA +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQRTGQN*PLWSHL
Trigger: TAGATGGGACCACAGTGGGCAATTTTGACCTGTCCT...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AAGAGGAGAGGAAGAGTTCCAGTTCCATCCACTGCGAGCACTACCCCATACCCATTACCCAGCCCCCACTaGTGTGGATCCAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KRRGRVPVPSTASTTPYPLPSPH*CGSSQP
Trigger: TGGCTGACTGGATCCACAGCAGTGGGGGCTGGGTAA...TGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTCCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp GCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATCAAGGAGCCCCCAGCTaGGGCCTTTCATCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AKKGRTGQNCPLWSHLSYQGAPS*GLSSSW
Trigger: CCAGGAGGATGAAAGGCCCCAGCTGGGGGCTCCTTG...ATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAAAGACACAGCACTGGTaGCAAGGAGCCCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSFLGLNKVPICPFGLWRKTQHW*QGAPSW
Trigger: CCAGCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTT...TCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGAAGACACAGCACTGGTaGCAAGGAGCCCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KTASLSTQVSRLQSRAFWKTQHW*QGAPSW
Trigger: CCAGCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTT...CCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCGGCGGCCAGCCGGGATaGCAGCTCTTAAGACACAGC +
Preference number: 4 (lower is better)
Translates to: WSHLSYASGNPDQALYPFGGQPG*QLLRHS
Trigger: GCTGTGTCTTAAGAGCTGCCATCCCGGCTGGCCGCC...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCAGAGCCCGTGTGTCTaGGGCCGAGGCTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: PRANPKELYGSRRESLVFQSPCV*GRGWGR
Trigger: GCGACCCCAGCCTCGGCCCCAGACACACGGGCTCTG...GAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCTCAAGGCATCAACAGTCTCACTGAGACACAGTGTGGGACCCAGACTGTATTCCAGCCCCCACTGCTGTaGATCCAGTCAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQGINSLTETQCGTQTVFQPPLL*IQSASC
Trigger: GCAGCTGGCTGACTGGATCCACAGCAGTGGGGGCTG...GAATACAGTCTGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCACACCTAGCCCCACCTaGCCCTGGACTTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPITPSPT*PWTFTC
Trigger: GCAAGTGAAAGTCCAGGGCCAGGTGGGGCTAGGTGT...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGACACCTAGCCCCACCTaGCCCTGGACTTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: GRTGQNCPLWSHLSYASGTPSPT*PWTFTC
Trigger: GCAAGTGAAAGTCCAGGGCCAGGTGGGGCTAGGTGT...CCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTTTTCTCCTTGAGGAATCCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGCACCTCCCCCAGCCCTaGAACGACTACATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VFSLRNPITTRFARQPSMHLPQP*NDYISC
Trigger: ACAGGAGATGTAGTCGTTCCAGGGCTGGGGGAGGTG...CATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGGATTCCTCAAGGAGAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAACCATTGTGCCTGAGTaGGAGAGGAGGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RSFLGLNKVPICPFGLWRTIVPE*ERRVAG
Trigger: GCCTGCCACCCTCCTCTCCCACTCAGGCACAATGGT...TCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTACCATTGTGCCTGAGTaGGAGAGGAGGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCTIVPE*ERRVAG
Trigger: GCCTGCCACCCTCCTCTCCCACTCAGGCACAATGGT...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGTGCAGCAGTGAGGTCTaGCTCAGGGCATGCATCTGG +
Preference number: 4 (lower is better)
Translates to: GRTGQNCPLWSHLSYASGCSSEV*LRACIW
Trigger: CCAGATGCATGCCCTGAGCCAGACCTCACTGCTGCA...CCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAATCTAAGCTATGCTTCTaGGAATCCAGACCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQSKLCF*ESRPSP
Trigger: AGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGA...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAACCCTATTTGTCCCTTTaGGCTCTGGAGAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQPYLSL*ALESKK
Trigger: TTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGG...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TCTCAAGGCATCAACAGTCTCACTGAGACACAGTGTGGGACCCAGACTGTATTCGAAGCGTTGTTGGGCTaGGCCTGGGGTCACATGCAG +
Preference number: 4 (lower is better)
Translates to: SQGINSLTETQCGTQTVFEALLG*AWGHMQ
Trigger: CTGCATGTGACCCCAGGCTCAGCCCAACAACGCTTC...GAATACAGTCTGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCGAAGCGTTGTTGGGCTaGGCCTGGGGTCACATGCAG +
Preference number: 4 (lower is better)
Translates to: WSHLSYASGNPDQALYPFEALLG*AWGHMQ
Trigger: CTGCATGTGACCCCAGGCTCAGCCCAACAACGCTTC...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCCATCGGAGACCTGGGTaGAGCGTTGTTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: WSHLSYASGNPDQALYPFHRRPG*SVVGLS
Trigger: GCTCAGCCCAACAACGCTTCACCCAGGTCTCCGATG...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGAACATCGGAGACCTGGGTaGAGCGTTGTTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QDRSKLPTVVPSKLCFWEHRRPG*SVVGLS
Trigger: GCTCAGCCCAACAACGCTTCACCCAGGTCTCCGATG...TTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTACCCCGTATAGAGCTGTaGACTCCGCCCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SWPRANPKELYGSRRESLPRIEL*TPPSPH
Trigger: GTGGGGGCTGGGCGGAGTTCACAGCTCTATACGGGG...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCTGACAGAGCCCGCATGGCTTGGTaGAGCGGGTCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: NPKELYGSRRESLVFPDRARMAW*SGSAAG
Trigger: CCCAGCAGCTGACCCGCTGCACCAAGCCATGCGGGC...TCTGTCAGGGAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GTCTCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCAGAACTCATCTCCAGCTaGCCGCATGGCTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VSGVSLQAKKGRTGQNCPELISS*PHGLVQ
Trigger: CTGCACCAAGCCATGCGGGCAGCTGGAGATGAGTTC...TGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAAGAACTCATCTCCAGCTaGCCGCATGGCTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SQSNSIQTGRLSPVPHSQELISS*PHGLVQ
Trigger: CTGCACCAAGCCATGCGGGCAGCTGGAGATGAGTTC...TTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR GCA 90 bp AATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGCCAGATCAGAGAAGGTaGGCCGGAAGCGGGTCTCGA +
Preference number: 4 (lower is better)
Translates to: NPDQALYPFRKQPLFPPRPDQRR*AGSGSR
Trigger: TCGAGACCCGCTTCCGGCGCACCTTCTCTGATCTGG...CCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCCACTGCGAGCACTACCCCATACCCAGCTCCTCTCTGGCCAAAGCTCTTCTCCACTCTCAGCACACAGTaGAGCCCCAAAGACAAAGAA +
Preference number: 4 (lower is better)
Translates to: STASTTPYPAPLWPKLFSTLSTQ*SPKDKE
Trigger: TTCTTTGTCTTTGGGGCTGCACTGTGTGCTGAGAGT...GGAGAAGAGCTTTGGCCAGAGAGGAGCTGGGTATGGGGTAGTGCTCGCAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR GCA 90 bp TTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCAGCCACCATCCACTCCTaGACTTGTCCCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: FQKTASLSTQVSRLQSRAATIHS*TCPTSG
Trigger: ACCACTGGTGGGACAAGTGCAGGAGTGGATGGTGGC...TGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAAGCCACCATCCACTCCTaGACTTGTCCCACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SQSNSIQTGRLSPVPHSQATIHS*TCPTSG
Trigger: ACCACTGGTGGGACAAGTGCAGGAGTGGATGGTGGC...TTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR GCA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTACCGCCCAGCCCCCACTaGTGTGGATCCAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SWPRANPKELYGSRRESLPPSPH*CGSSQP
Trigger: TGGCTGACTGGATCCACAGCAGTGGGGGCTGGGCGG...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCCCATCCTGTTCCATaGCCACCCATCCACCAACTC +
Preference number: 4 (lower is better)
Translates to: RSFLGLNKVPICPFGLWRAHPVP*PPIHQL
Trigger: GAGTTGGTGGATGGGTGGGCATGGAACAGGATGGGC...TCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAACTCCCCTCTGTGTCCTaGTCACTCTTCCAATCGCCT +
Preference number: 4 (lower is better)
Translates to: GPTFWRAQLRCHILGPSELPSVS*SLFQSP
Trigger: AGGCGATTGGAAGAGTGAGCAGGACACAGAGGGGAG...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCACACCAGCATGCGTaGACATGCACACGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: AKKGRTGQNCPLWSHLSYAHQHA*TCTRVS
Trigger: GGACACGCGTGTGCATGTGCACGCATGCTGGTGTGC...ATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTAACCATCACCACCAGATTTaGCAGGCAGCCCAGCATGCA +
Preference number: 4 (lower is better)
Translates to: QPLFPPRCQGFRAGHFGNHHHQI*QAAQHA
Trigger: TGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATG...GTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp ACCTCCCCCAGCCCTGGAACGACTACATCTCCTGTGCCCCTAAACTTGCCAAAAGGCCAGCTGCAGAACTaGTCTTCTCTCCAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: TSPSPGTTTSPVPLNLPKGQLQN*SSLQSL
Trigger: AAGGCTTTGGAGAGAAGAGCAGTTCTGCAGCTGGCC...TTTTGGCAAGTTTAGGGGCACAGGAGATGTAGTCGTTCCAGGGCTGGGGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCAACACCTGAGGCCAATTTGGTCCCACGTTCTGGCGAGCACAACTACGTTGCCAGGAACAAGGCCAGCTaGAGAACTGCTCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: STPEANLVPRSGEHNYVARNKAS*RTALLS
Trigger: GGAGAGAAGAGCAGTTCTGCAGCTGGCCTTGTTCCT...GGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTCAGGCTCAACAGCCCTaGCCTTCTATCAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCQAQQP*PSIRAQ
Trigger: CTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTG...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGCAGGCTCAACAGCCCTaGCCTTCTATCAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: KTASLSTQVSRLQSRAFWQAQQP*PSIRAQ
Trigger: CTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTG...CCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCAAAGCCCACAACACAGCATAGGCCAGTCCTGGAGTACCCATCACCCTCACACACTCTAGAACCCATATaGCTGGCCCCTGATAAAGCC +
Preference number: 4 (lower is better)
Translates to: PKPTTQHRPVLEYPSPSHTLEPI*LAPDKA
Trigger: GGCTTTATCAGGGGCCAGGCATATGGGTTCTAGAGT...GTGTGAGGGTGATGGGTACTCCAGGACTGGCCTATGCTGTGTTGTGGGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGAGACCAAGTGGCACATaGAGCCTACCACCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: GRTGQNCPLWSHLSYASGRPSGT*SLPPPL
Trigger: TAGGGGAGGTGGTAGGCTGCATGTGCCACTTGGTCT...CCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGCCTGGCCATGGTCCCTaGAGCTCCTCTTGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: KTASLSTQVSRLQSRAFWPGHGP*SSSWLK
Trigger: CTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGG...CCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp ACCACAGGCAGGGTTCTAGAGCACTGTGTCAGAAAGTTAGCATTGGAGAGCAGCCCTGGCCATGGTCCCTaGAGCTCCTCTTGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: TTGRVLEHCVRKLALESSPGHGP*SSSWLK
Trigger: CTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGG...GCTGCTCTCCAATGCTAACTTTCTGACACAGTGCTCTAGAACCCTGCCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGCATCTCTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCAGTTCCATCCACTaGGAGCACTACCCCATACCC +
Preference number: 4 (lower is better)
Translates to: GISQSNSIQTGRLSPVPHSSSIH*EHYPIP
Trigger: GGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGA...ATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAGAGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp TTTCCTTGGCGAAAAATTCTGCTCAGAACTAGCATCCTTTGCCAAGGCTTGCCTGCTGCCCGCATGGCTTaGTGCAGCGGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FPWRKILLRTSILCQGLPAARMA*CSGSAA
Trigger: AGCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGC...AGGCAAGCCTTGGCAAAGGATGCTAGTTCTGAGCAGAATTTTTCGCCAAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp CTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCTGGGTGAAGCGTTGTTaGGCTGAGCCTGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: LLPWPKQSPYLSLWALESWVKRC*AEPGVT
Trigger: TGTGACCCCAGGCTCAGCCCAACAACGCTTCACCCA...GCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATGGGTGAAGCGTTGTTaGGCTGAGCCTGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: FQKTASLSTQVSRLQSRAWVKRC*AEPGVT
Trigger: TGTGACCCCAGGCTCAGCCCAACAACGCTTCACCCA...TGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGCACCTCCCCCAGCCCTaGAACGACTACATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: KTASLSTQVSRLQSRAFWHLPQP*NDYISC
Trigger: ACAGGAGATGTAGTCGTTCCAGGGCTGGGGGAGGTG...CCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGAAACCATTGTGCCTGAGTaGGAGAGGAGGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QDRSKLPTVVPSKLCFWETIVPE*ERRVAG
Trigger: GCCTGCCACCCTCCTCTCCCACTCAGGCACAATGGT...TTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTAACAGCATAGGCCAGTCCTaGAGTACCCATCACCCTCAC +
Preference number: 4 (lower is better)
Translates to: QPLFPPRCQGFRAGHFGNSIGQS*STHHPH
Trigger: GTGAGGGTGATGGGTACTCCAGGACTGGCCTATGCT...GTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCTGCAGCAGTGAGGTCTaGCTCAGGGCATGCATCTGG +
Preference number: 4 (lower is better)
Translates to: QTKPFTLSENSLSFHPGVCSSEV*LRACIW
Trigger: CCAGATGCATGCCCTGAGCCAGACCTCACTGCTGCA...GACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTCACCTGAGGCCAATTTaGTCCCACGTTCTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCHLRPI*SHVLAS
Trigger: GCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTG...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCCTTCCACAACAAGACCAAGTaGCACATGCAGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: VGSGINNRRTELPYFRSFHNKTK*HMQPTT
Trigger: GGTGGTAGGCTGCATGTGCCACTTGGTCTTGTTGTG...GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAACCAGTGTTGACTGCATaGCAGCCCTGGAGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SQSNSIQTGRLSPVPHSQPVLTA*QPWSAE
Trigger: CTCTGCACTCCAGGGCTGCCATGCAGTCAACACTGG...TTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp TCTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAACCCACCCTGAGAGACTaGTTCATCTGCCCACTCTGC +
Preference number: 4 (lower is better)
Translates to: SQSNSIQTGRLSPVPHSQPTLRD*FICPLC
Trigger: GCAGAGTGGGCAGATGAACCAGTCTCTCAGGGTGGG...TTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp CTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAACATAGCTTGTGAACTCCGCCTGTaGGAGAGAAGGGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LIPSRRGDSAPYLIPNIACELRL*ERREAG
Trigger: TCCTGCTTCCCTTCTCTCCCACAGGCGGAGTTCACA...AGCTATGTTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR TCA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAACATCAACAGTCTCACTaGGACACAGTGTGGGACCCA +
Preference number: 4 (lower is better)
Translates to: GPTFWRAQLRCHILGPSEHQQSH*DTVWDP
Trigger: TGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATG...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAACATTCTAGGACCAAGTaGAAATCTCCAAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQHSRTK*KSPRRV
Trigger: GACTCTTCTTGGAGATTTTCACTTGGTCCTAGAATG...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTCTGGACTCAACACCTaGGGCCAATTTGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: SGVSLQAKKGRTGQNCPLSGLNT*GQFGPT
Trigger: CGTGGGACCAAATTGGCCTCAGGTGTTGAGTCCAGA...CAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp ACTCTGCCTCCAGTGAATTCCATCCTTTCCTTGGCGAAAAATTCTGCTCAGAACGGTGCACCCCCACCCTaGGAGACTGGTTCATCTGCC +
Preference number: 4 (lower is better)
Translates to: TLPPVNSILSLAKNSAQNGAPPP*ETGSSA
Trigger: GGCAGATGAACCAGTCTCTCAGGGTGGGGGTGCACC...GTTCTGAGCAGAATTTTTCGCCAAGGAAAGGATGGAATTCACTGGAGGCAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR GCA 90 bp TTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAAGCCCGCATGGCTTGGTaGAGCGGGTCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LKIGNHTQPSWPRANPKEARMAW*SGSAAG
Trigger: CCCAGCAGCTGACCCGCTGCACCAAGCCATGCGGGC...TTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGGAACTCATCTCCAGCTaGCCGCATGGCTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: NPDQALYPFRKQPLFPPRELISS*PHGLVQ
Trigger: CTGCACCAAGCCATGCGGGCAGCTGGAGATGAGTTC...CCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCTGACAGACCGCCCAGCCCCCACTaGTGTGGATCCAGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: NPKELYGSRRESLVFPDRPPSPH*CGSSQP
Trigger: TGGCTGACTGGATCCACAGCAGTGGGGGCTGGGCGG...TCTGTCAGGGAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGCTCCCCTCTGTGTCCTaGTCACTCTTCCAATCGCCT +
Preference number: 4 (lower is better)
Translates to: KTASLSTQVSRLQSRAFWLPSVS*SLFQSP
Trigger: AGGCGATTGGAAGAGTGAGCAGGACACAGAGGGGAG...CCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCGCACACCAGCATGCGTaGACATGCACACGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: YASGNPDQALYPFRKQPLAHQHA*TCTRVS
Trigger: GGACACGCGTGTGCATGTGCACGCATGCTGGTGTGC...GAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCCATCACCACCAGATTTaGCAGGCAGCCCAGCATGCA +
Preference number: 4 (lower is better)
Translates to: LLPWPKQSPYLSLWALESHHHQI*QAAQHA
Trigger: TGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATG...GCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp ACCTGGGGAAGGAAGCACAGACTCCAATTTGGAGCCGATGGTCTAGTCAGTGGTAGGAACAAGGCCAGCTaGAGAACTGCTCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: TWGRKHRLQFGADGLVSGRNKAS*RTALLS
Trigger: GGAGAGAAGAGCAGTTCTGCAGCTGGCCTTGTTCCT...ACCACTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGCTTCCTTCCCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCCAGGCTCAACAGCCCTaGCCTTCTATCAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: WSHLSYASGNPDQALYPFQAQQP*PSIRAQ
Trigger: CTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTG...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGAGACCAAGTGGCACATaGAGCCTACCACCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: ENSLSFHPGVKASEQGILRPSGT*SLPPPL
Trigger: TAGGGGAGGTGGTAGGCTGCATGTGCCACTTGGTCT...CAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCTGTTTGAGGGCAAATTaGCCAGCCTGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLPWPKQSPYLSLWALESCLRAN*PACSAP
Trigger: GGGAGCTGAGCAGGCTGGGCAATTTGCCCTCAAACA...GCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CAGTTTGGGTACAGAGGTCCCAGAGATTGGAAACACTTTAGGCACCATTGTGCCCCTGGCCATGGTCCCTaGAGCTCCTCTTGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: QFGYRGPRDWKHFRHHCAPGHGP*SSSWLK
Trigger: CTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGG...GGCACAATGGTGCCTAAAGTGTTTCCAATCTCTGGGACCTCTGTACCCAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAACCTGGAGACCAGCTTTaGAGAAGGATGTGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SQSNSIQTGRLSPVPHSQPGDQL*RRMCRA
Trigger: CGCTCTGCACATCCTTCTGCAAAGCTGGTCTCCAGG...TTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp TTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAAAGACACAGCACTGGTaGCAAGGAGCCCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FLGLNKVPICPFGLWRARKTQHW*QGAPSW
Trigger: CCAGCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTT...TCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCCTTAAGACACAGCACTaGTGGCAAGGAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGLKTQH*WQGAPS
Trigger: GCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTTAAG...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCTCAAGGCATCAACAGTCTCACTGAGACACAGTGTGGGACCCAGACTGTATTCTGGGTGAAGCGTTGTTaGGCTGAGCCTGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: SQGINSLTETQCGTQTVFWVKRC*AEPGVT
Trigger: TGTGACCCCAGGCTCAGCCCAACAACGCTTCACCCA...GAATACAGTCTGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGAGTTCATCGGAGACCTaGGTGAAGCGTTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GRTGQNCPLWSHLSYASGSSSET*VKRCWA
Trigger: AGCCCAACAACGCTTCACCCAGGTCTCCGATGAACT...CCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AAGAGGAGAGGAAGAGTTCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAAGTTCATCGGAGACCTaGGTGAAGCGTTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: KRRGRVPVPSTASTTPYPSSSET*VKRCWA
Trigger: AGCCCAACAACGCTTCACCCAGGTCTCCGATGAACT...TGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp TCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTTCCAATCGCCTACCTaGCCTACTCAGCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SGVSLQAKKGRTGQNCPLFQSPT*PTQLPH
Trigger: GTGAGGGAGCTGAGTAGGCCAGGTAGGCGATTGGAA...CAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTTCCAATCGCCTACCTaGCCTACTCAGCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SRPSPLPFQKTASLSTQVFQSPT*PTQLPH
Trigger: GTGAGGGAGCTGAGTAGGCCAGGTAGGCGATTGGAA...CACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCCACCTCCCCCAGCCCTaGAACGACTACATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: WSHLSYASGNPDQALYPFHLPQP*NDYISC
Trigger: ACAGGAGATGTAGTCGTTCCAGGGCTGGGGGAGGTG...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGCACACCAGCATGCGTGCATTTAGAGTTTCAGTTTaGGTACAGAGGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PITTRFARQPSMHTSMRAFRVSV*VQRSQR
Trigger: TCTCTGGGACCTCTGTACCCAAACTGAAACTCTAAA...TGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGAGCATAGGCCAGTCCTaGAGTACCCATCACCCTCAC +
Preference number: 4 (lower is better)
Translates to: ENSLSFHPGVKASEQGILSIGQS*STHHPH
Trigger: GTGAGGGTGATGGGTACTCCAGGACTGGCCTATGCT...CAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCCACAACAAGACCAAGTaGCACATGCAGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPIHNKTK*HMQPTT
Trigger: GGTGGTAGGCTGCATGTGCCACTTGGTCTTGTTGTG...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAAACCCCTTGGTAACCTGGCCATaGTCCCTGCAGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GLNKVPICPFGLWRARNPLVTWP*SLQLLL
Trigger: CAAGAGGAGCTGCAGGGACCATGGCCAGGTTACCAA...GGGGTTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCTTGGTAACCTGGCCATaGTCCCTGCAGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QTKPFTLSENSLSFHPGVLVTWP*SLQLLL
Trigger: CAAGAGGAGCTGCAGGGACCATGGCCAGGTTACCAA...GACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGATTGGTAACCTGGCCATaGTCCCTGCAGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: RSFLGLNKVPICPFGLWRLVTWP*SLQLLL
Trigger: CAAGAGGAGCTGCAGGGACCATGGCCAGGTTACCAA...TCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CAA 72 bp AAAAGCAGAAGTCTGGACTCAACACCTGAGGCCAATTaGGTCCCACGTTCTGGCGAGCACAACTACGTTGCC +
Preference number: 4 (lower is better)
Translates to: KSRSLDSTPEAN*VPRSGEHNYVA
Trigger: GGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGAGTCCAGACTTCTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
3UTR CAA 72 bp CTTCCGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTaGTCCCTTTGGGCTCTGGAGAGCAAGAAACCCCTC +
Preference number: 4 (lower is better)
Translates to: LPLLPWPKQSPY*SLWALESKKPL
Trigger: GAGGGGTTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp AATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCTGACAGACAGCACTGTCCTCACTaGTGCCCAGTTCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: NPKELYGSRRESLVFPDRQHCPH*CPVPLP
Trigger: CGGGAGGGGAACTGGGCATCAGTGAGGACAGTGCTG...TCTGTCAGGGAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACCAGCACTGTCCTCACTaGTGCCCAGTTCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANQHCPH*CPVPLP
Trigger: CGGGAGGGGAACTGGGCATCAGTGAGGACAGTGCTG...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp AATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGCCTTCCTCAGGGCTGTaGAGCAAGTTCCAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: NPDQALYPFRKQPLFPPRPSSGL*SKFQVV
Trigger: AACGACCTGGAACTTGCTTCACAGCCCTGAGGAAGG...CCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGCCTCTCCCTATCACCTaGGAACCCCTAAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SRPSPLPFQKTASLSTQVPLPIT*EPLSFH
Trigger: ATGGAAGCTTAGGGGTTCTCAGGTGATAGGGAGAGG...CACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCCTCTCCCTATCACCTaGGAACCCCTAAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PSPLPFQKTASLSTQVSRPLPIT*EPLSFH
Trigger: ATGGAAGCTTAGGGGTTCTCAGGTGATAGGGAGAGG...CCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GATTCAGATCTGAAATGGTCATCTCAAGGCATCAACAGTCTCACTGAGACACAGAGGCACCATTGTGCCTaGGTGGGAGAGGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DSDLKWSSQGINSLTETQRHHCA*VGEEGG
Trigger: GCCACCCTCCTCTCCCACTCAGGCACAATGGTGCCT...CTGTGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp AATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCTGACAGAAGGCACCATTGTGCCTaGGTGGGAGAGGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: NPKELYGSRRESLVFPDRRHHCA*VGEEGG
Trigger: GCCACCCTCCTCTCCCACTCAGGCACAATGGTGCCT...TCTGTCAGGGAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTCATCAACAGTCTCACTaGGACACAGTGTGGGACCCA +
Preference number: 4 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCHQQSH*DTVWDP
Trigger: TGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATG...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCAGCCACAAGCTGGCTCTaGGTTTCTGGTGTCAGCATA +
Preference number: 4 (lower is better)
Translates to: FQKTASLSTQVSRLQSRAATSWL*VSGVSI
Trigger: TATGCTGACACCAGAAACTCAGAGCCAGCTTGTGGC...TGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAAACCCCGTCCCTAGTTTTCCCTaGCAGAAGAGTCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLNKVPICPFGLWRARNPVPSFP*QKSLWG
Trigger: ACCCCAGAGACTCTTCTGTCAGGGAAAACTAGGGAC...GGGGTTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGGTCCCTAGTTTTCCCTaGCAGAAGAGTCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SGVSLQAKKGRTGQNCPLVPSFP*QKSLWG
Trigger: ACCCCAGAGACTCTTCTGTCAGGGAAAACTAGGGAC...CAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAACATAGCTGATGTAAAAAGTCCCTaGCAACATTCCCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LIPSRRGDSAPYLIPNIADVKSP*QHSPAG
Trigger: GCCTGCAGGGGAATGTTGTCAGGGACTTTTTACATC...AGCTATGTTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR GCA 90 bp TCAACACCTGAGGCCAATTTGGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACTCTCAGCACACAGTaGAGCCCCAAAGACAAAGAA +
Preference number: 4 (lower is better)
Translates to: STPEANLVPRSGEHNYVATLSTQ*SPKDKE
Trigger: TTCTTTGTCTTTGGGGCTGCACTGTGTGCTGAGAGT...GGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCGCCCATCCTGTTCCATaGCCACCCATCCACCAACTC +
Preference number: 4 (lower is better)
Translates to: YASGNPDQALYPFRKQPLAHPVP*PPIHQL
Trigger: GAGTTGGTGGATGGGTGGGCATGGAACAGGATGGGC...GAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AATAAGTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCTCCCCTCTGTGTCCTaGTCACTCTTCCAATCGCCT +
Preference number: 4 (lower is better)
Translates to: NKWGVGLIIAGPSCPTSALPSVS*SLFQSP
Trigger: AGGCGATTGGAAGAGTGAGCAGGACACAGAGGGGAG...AGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCACTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCCTCCCCTCTGTGTCCTaGTCACTCTTCCAATCGCCT +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGLPSVS*SLFQSP
Trigger: AGGCGATTGGAAGAGTGAGCAGGACACAGAGGGGAG...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CAGTTTGGGTACAGAGGTCCCAGAGATTGGAAACACTTTAGGCACCATTGTGCCCATCACCACCAGATTTaGCAGGCAGCCCAGCATGCA +
Preference number: 4 (lower is better)
Translates to: QFGYRGPRDWKHFRHHCAHHHQI*QAAQHA
Trigger: TGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATG...GGCACAATGGTGCCTAAAGTGTTTCCAATCTCTGGGACCTCTGTACCCAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CTACCTAAGCCTCCACCCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCTTCTCTCCAAAGCCTTaGCAATCACTTTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LPKPPPIQAQQPCPSIRAFSPKP*QSLSGK
Trigger: CTTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAA...GGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGGGTGGAGGCTTAGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GCCCTACTTCCGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGGCCAGCTGCAGAACTaGTCTTCTCTCCAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ALLPLLPWPKQSPYLSLWGQLQN*SSLQSL
Trigger: AAGGCTTTGGAGAGAAGAGCAGTTCTGCAGCTGGCC...CCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCGGAAGTAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGCCAGCTGCAGAACTaGTCTTCTCTCCAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCGQLQN*SSLQSL
Trigger: AAGGCTTTGGAGAGAAGAGCAGTTCTGCAGCTGGCC...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGAGGAACAAGGCCAGCTaGAGAACTGCTCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PSPLPFQKTASLSTQVSRRNKAS*RTALLS
Trigger: GGAGAGAAGAGCAGTTCTGCAGCTGGCCTTGTTCCT...CCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GTTTTCTCCTTGAGGAATCCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGACTCTAGAACCCATATaGCTGGCCCCTGATAAAGCC +
Preference number: 4 (lower is better)
Translates to: VFSLRNPITTRFARQPSMTLEPI*LAPDKA
Trigger: GGCTTTATCAGGGGCCAGGCATATGGGTTCTAGAGT...CATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGGATTCCTCAAGGAGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCAACACCTGAGGCCAATTTGGTCCCACGTTCTGGCGAGCACAACTACGTTGCCCGAGCACAACTACGTTaGCACATTCTAGGACCAAGT +
Preference number: 4 (lower is better)
Translates to: STPEANLVPRSGEHNYVARAQLR*HILGPS
Trigger: ACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCG...GGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAAAATACCATGAAAAAGTaGAGCCCTCTCTCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQNTMKK*SPLSKA
Trigger: TGCTTTTGAGAGAGGGCTGCACTTTTTCATGGTATT...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp ACCTCCCCCAGCCCTGGAACGACTACATCTCCTGTGCCCCTAAACTTGCCAAAAGTCCCATCTAAGCTATaGTTCTGGGAATCCAGACCA +
Preference number: 4 (lower is better)
Translates to: TSPSPGTTTSPVPLNLPKVPSKL*FWESRP
Trigger: TGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGAC...TTTTGGCAAGTTTAGGGGCACAGGAGATGTAGTCGTTCCAGGGCTGGGGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAATCGCAGGACCGAGTTaGCCTACTTCCGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FLGLNKVPICPFGLWRARIAGPS*PTSAPS
Trigger: GGAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGAT...TCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCATCGCAGGACCGAGTTaGCCTACTTCCGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: YASGNPDQALYPFRKQPLIAGPS*PTSAPS
Trigger: GGAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGAT...GAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAACATAGCTCATTCCCAACATAGCTaGCTCAGCCTCCAATCAGAG +
Preference number: 4 (lower is better)
Translates to: LIPSRRGDSAPYLIPNIAHSQHS*LSLQSE
Trigger: CTCTGATTGGAGGCTGAGGCAGCTATGTTGGGAATG...AGCTATGTTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp ATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATCAAGGAGCCCCCAGCTaGGGCCTTTCATCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IGNHTQPSWPRANPKELYQGAPS*GLSSSW
Trigger: CCAGGAGGATGAAAGGCCCCAGCTGGGGGCTCCTTG...ATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACCAAGGAGCCCCCAGCTaGGGCCTTTCATCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANQGAPS*GLSSSW
Trigger: CCAGGAGGATGAAAGGCCCCAGCTGGGGGCTCCTTG...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCCTTAAGACACAGCACTaGTGGCAAGGAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: KLCFWESRPSPLPFQKTALKTQH*WQGAPS
Trigger: GCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTTAAG...GGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp ATGGATTTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCGCTGCCCGCATGGCTTaGTGCAGCGGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MDLKIGNHTQPSWPRANPAARMA*CSGSAA
Trigger: AGCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGC...GGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAAATCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAAGCTGCCCGCATGGCTTaGTGCAGCGGGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LKIGNHTQPSWPRANPKEAARMA*CSGSAA
Trigger: AGCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGC...TTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGCATCTCTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATCACTTGTCCCACCAGTaGTTCCATCTCCTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: GISQSNSIQTGRLSPVPHHLSHQ*FHLLVD
Trigger: GTCAACAAGGAGATGGAACCACTGGTGGGACAAGTG...ATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAGAGATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACCAGCCCCCACTGCTGTaGATCCAGTCAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANQPPLL*IQSASC
Trigger: GCAGCTGGCTGACTGGATCCACAGCAGTGGGGGCTG...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCACACCTAGCCCCACCTaGCCCTGGACTTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: KLCFWESRPSPLPFQKTATPSPT*PWTFTC
Trigger: GCAAGTGAAAGTCCAGGGCCAGGTGGGGCTAGGTGT...GGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATTTCCAATCGCCTACCTaGCCTACTCAGCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: AKKGRTGQNCPLWSHLSYFQSPT*PTQLPH
Trigger: GTGAGGGAGCTGAGTAGGCCAGGTAGGCGATTGGAA...ATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTGCAGCAGTGAGGTCTaGCTCAGGGCATGCATCTGG +
Preference number: 4 (lower is better)
Translates to: YASGNPDQALYPFRKQPLCSSEV*LRACIW
Trigger: CCAGATGCATGCCCTGAGCCAGACCTCACTGCTGCA...GAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTCTCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCATTTGGTCCCACGTTCTaGCGAGCACAACTACGTTGC +
Preference number: 4 (lower is better)
Translates to: VSGVSLQAKKGRTGQNCPFGPTF*RAQLRC
Trigger: GCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAA...TGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCCACCTGAGGCCAATTTaGTCCCACGTTCTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: YASGNPDQALYPFRKQPLHLRPI*SHVLAS
Trigger: GCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTG...GAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGACACCTGAGGCCAATTTaGTCCCACGTTCTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: FLGLNKVPICPFGLWRARHLRPI*SHVLAS
Trigger: GCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTG...TCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCCTTCCCAATTTGGAGCCGATaGTCTAGTCAGTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VGSGINNRRTELPYFRSFPIWSR*SSQWFS
Trigger: GGAAAACCACTGACTAGACCATCGGCTCCAAATTGG...GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGGGCATTTTGGTAACCTaGCCATGGTCCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VPSKLCFWESRPSPLPFQGILVT*PWSLQL
Trigger: GAGCTGCAGGGACCATGGCCAGGTTACCAAAATGCC...CTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCAACACCTGAGGCCAATTTGGTCCCACGTTCTGGCGAGCACAACTACGTTGCCCCCTATTTGTCCCTTTaGGCTCTGGAGAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: STPEANLVPRSGEHNYVAPYLSL*ALESKK
Trigger: TTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGG...GGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp ACCTCCCCCAGCCCTGGAACGACTACATCTCCTGTGCCCCTAAACTTGCCAAAACCCTATTTGTCCCTTTaGGCTCTGGAGAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: TSPSPGTTTSPVPLNLPKPYLSL*ALESKK
Trigger: TTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGG...TTTTGGCAAGTTTAGGGGCACAGGAGATGTAGTCGTTCCAGGGCTGGGGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp AATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCTGACAGACATCGGAGACCTGGGTaGAGCGTTGTTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NPKELYGSRRESLVFPDRHRRPG*SVVGLS
Trigger: GCTCAGCCCAACAACGCTTCACCCAGGTCTCCGATG...TCTGTCAGGGAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACAGCACTGTCCTCACTaGTGCCCAGTTCCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LKIGNHTQPSWPRANPKEQHCPH*CPVPLP
Trigger: CGGGAGGGGAACTGGGCATCAGTGAGGACAGTGCTG...TTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCCCTCTCCCTATCACCTaGGAACCCCTAAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGPLPIT*EPLSFH
Trigger: ATGGAAGCTTAGGGGTTCTCAGGTGATAGGGAGAGG...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GTTTTCTCCTTGAGGAATCCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGGGAATGTTTTCTCCTTaGGGAATCCCATCACCACCA +
Preference number: 4 (lower is better)
Translates to: VFSLRNPITTRFARQPSMGMFSP*GIPSPP
Trigger: TGGTGGTGATGGGATTCCTCAAGGAGAAAACATTCC...CATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGGATTCCTCAAGGAGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCGCCACAAGCTGGCTCTaGGTTTCTGGTGTCAGCATA +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGATSWL*VSGVSI
Trigger: TATGCTGACACCAGAAACTCAGAGCCAGCTTGTGGC...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGTCCCTAGTTTTCCCTaGCAGAAGAGTCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GIQTKPFTLSENSLSFHPVPSFP*QKSLWG
Trigger: ACCCCAGAGACTCTTCTGTCAGGGAAAACTAGGGAC...TGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAAACCCCATAACCTACAAAGTCTaGCACCAGAGCCCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: GLNKVPICPFGLWRARNPITYKV*HQSPCV
Trigger: GACACACGGGCTCTGGTGGCAGACTTTGTAGGTTAT...GGGGTTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGAACTCATCTCCAGCTaGCCGCATGGCTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SWPRANPKELYGSRRESLELISS*PHGLVQ
Trigger: CTGCACCAAGCCATGCGGGCAGCTGGAGATGAGTTC...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGACTCTCAGCACACAGTaGAGCCCCAAAGACAAAGAA +
Preference number: 4 (lower is better)
Translates to: GRTGQNCPLWSHLSYASGTLSTQ*SPKDKE
Trigger: TTCTTTGTCTTTGGGGCTGCACTGTGTGCTGAGAGT...CCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCACTCTCAGCACACAGTaGAGCCCCAAAGACAAAGAA +
Preference number: 4 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPITLSTQ*SPKDKE
Trigger: TTCTTTGTCTTTGGGGCTGCACTGTGTGCTGAGAGT...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGAAAGGAACAAGGCCAGCTaGAGAACTGCTCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QDRSKLPTVVPSKLCFWERNKAS*RTALLS
Trigger: GGAGAGAAGAGCAGTTCTGCAGCTGGCCTTGTTCCT...TTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCGTCCCATCTAAGCTATaGTTCTGGGAATCCAGACCA +
Preference number: 4 (lower is better)
Translates to: PFKLRRAGQVKIAHCGPIVPSKL*FWESRP
Trigger: TGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGAC...GATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TTTCCTTGGCGAAAAATTCTGCTCAGAACTAGCATCCTTTGCCAAGGCTTGCCTCCATCCAGTGTTGACTaGATGGCAGCCCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: FPWRKILLRTSILCQGLPPSSVD*MAALEC
Trigger: GCACTCCAGGGCTGCCATGCAGTCAACACTGGATGG...AGGCAAGCCTTGGCAAAGGATGCTAGTTCTGAGCAGAATTTTTCGCCAAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTACTTAAGACACAGCACTaGTGGCAAGGAGCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SWPRANPKELYGSRRESLLKTQH*WQGAPS
Trigger: GCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTTAAG...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp ACTCTGCCTCCAGTGAATTCCATCCTTTCCTTGGCGAAAAATTCTGCTCAGAACTGGGTGAAGCGTTGTTaGGCTGAGCCTGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: TLPPVNSILSLAKNSAQNWVKRC*AEPGVT
Trigger: TGTGACCCCAGGCTCAGCCCAACAACGCTTCACCCA...GTTCTGAGCAGAATTTTTCGCCAAGGAAAGGATGGAATTCACTGGAGGCAGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCAGTTCATCGGAGACCTaGGTGAAGCGTTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGSSSET*VKRCWA
Trigger: AGCCCAACAACGCTTCACCCAGGTCTCCGATGAACT...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCTCAAGGCATCAACAGTCTCACTGAGACACAGTGTGGGACCCAGACTGTATTCAGTTCATCGGAGACCTaGGTGAAGCGTTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SQGINSLTETQCGTQTVFSSSET*VKRCWA
Trigger: AGCCCAACAACGCTTCACCCAGGTCTCCGATGAACT...GAATACAGTCTGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGCACTTGTCCCACCAGTaGTTCCATCTCCTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: SGVSLQAKKGRTGQNCPLHLSHQ*FHLLVD
Trigger: GTCAACAAGGAGATGGAACCACTGGTGGGACAAGTG...CAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTCACTTGTCCCACCAGTaGTTCCATCTCCTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCHLSHQ*FHLLVD
Trigger: GTCAACAAGGAGATGGAACCACTGGTGGGACAAGTG...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp ATGGATTTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCCAGCCCCCACTGCTGTaGATCCAGTCAGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: MDLKIGNHTQPSWPRANPQPPLL*IQSASC
Trigger: GCAGCTGGCTGACTGGATCCACAGCAGTGGGGGCTG...GGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAAATCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAAGCATAGGCCAGTCCTaGAGTACCCATCACCCTCAC +
Preference number: 4 (lower is better)
Translates to: FLGLNKVPICPFGLWRARSIGQS*STHHPH
Trigger: GTGAGGGTGATGGGTACTCCAGGACTGGCCTATGCT...TCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTTTGGTCCCACGTTCTaGCGAGCACAACTACGTTGC +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGFGPTF*RAQLRC
Trigger: GCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAA...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCATTTGGTCCCACGTTCTaGCGAGCACAACTACGTTGC +
Preference number: 4 (lower is better)
Translates to: GIQTKPFTLSENSLSFHPFGPTF*RAQLRC
Trigger: GCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAA...TGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATTTTGGTCCCACGTTCTaGCGAGCACAACTACGTTGC +
Preference number: 4 (lower is better)
Translates to: AKKGRTGQNCPLWSHLSYFGPTF*RAQLRC
Trigger: GCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAA...ATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGCACAACAAGACCAAGTaGCACATGCAGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: NPDQALYPFRKQPLFPPRHNKTK*HMQPTT
Trigger: GGTGGTAGGCTGCATGTGCCACTTGGTCTTGTTGTG...CCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GCTGGCTCTGAGTTTCTGGTGTCAGCATACTCACAACAAGACCAAGTGGCACATCACAACAAGACCAAGTaGCACATGCAGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: AGSEFLVSAYSQQDQVAHHNKTK*HMQPTT
Trigger: GGTGGTAGGCTGCATGTGCCACTTGGTCTTGTTGTG...ATGTGCCACTTGGTCTTGTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAACTGGCTCTGAGTTTCTaGTGTCAGCATACTCACAAC +
Preference number: 4 (lower is better)
Translates to: GPTFWRAQLRCHILGPSELALSF*CQHTHN
Trigger: GTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAG...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGCACAGACTCCAATTTaGAGCCGATGGTCTAGTCAG +
Preference number: 4 (lower is better)
Translates to: ENSLSFHPGVKASEQGILAQTPI*SRWSSQ
Trigger: CTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGC...CAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAAACCCCGCACAGACTCCAATTTaGAGCCGATGGTCTAGTCAG +
Preference number: 4 (lower is better)
Translates to: GLNKVPICPFGLWRARNPAQTPI*SRWSSQ
Trigger: CTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGC...GGGGTTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp ACCTGGGGAAGGAAGCACAGACTCCAATTTGGAGCCGATGGTCTAGTCAGTGGTTCTAAGCTATGCTTCTaGGAATCCAGACCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: TWGRKHRLQFGADGLVSGSKLCF*ESRPSP
Trigger: AGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGA...ACCACTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGCTTCCTTCCCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp ATGGATTTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCGGCCTTTCATCCTCCTaGCCAGCGTGGAGCCCGAGT +
Preference number: 4 (lower is better)
Translates to: MDLKIGNHTQPSWPRANPGLSSS*PAWSPS
Trigger: ACTCGGGCTCCACGCTGGCCAGGAGGATGAAAGGCC...GGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAAATCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679219.1
3UTR CAA 72 bp CAACCCCTAGGAAACTTCAGGGCTCTGCCAAGCAGTTaGAAAACCACTGGCCTAGTTTGTCCTGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: QPLGNFRALPSS*KTTGLVCPEQV
Trigger: GACTTGCTCAGGACAAACTAGGCCAGTGGTTTTCAAACTGCTTGGCAGAGCCCTGAAGTTTCCTAGGGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACATCGGAGACCTGGGTaGAGCGTTGTTGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LKIGNHTQPSWPRANPKEHRRPG*SVVGLS
Trigger: GCTCAGCCCAACAACGCTTCACCCAGGTCTCCGATG...TTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCGGAATGTTTTCTCCTTaGGGAATCCCATCACCACCA +
Preference number: 4 (lower is better)
Translates to: LLPWPKQSPYLSLWALESGMFSP*GIPSPP
Trigger: TGGTGGTGATGGGATTCCTCAAGGAGAAAACATTCC...GCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGTTTCTCTCTAAGCCTTaGGGCATCAGGACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: VPSKLCFWESRPSPLPFQFLSKP*GIRTRA
Trigger: TGCCCTTGTCCTGATGCCTCAAGGCTTAGAGAGAAA...CTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGACATCAACAGTCTCACTaGGACACAGTGTGGGACCCA +
Preference number: 4 (lower is better)
Translates to: FLGLNKVPICPFGLWRARHQQSH*DTVWDP
Trigger: TGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATG...TCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTATCTGGACTCAACACCTaGGGCCAATTTGGTCCCACG +
Preference number: 4 (lower is better)
Translates to: SWPRANPKELYGSRRESLSGLNT*GQFGPT
Trigger: CGTGGGACCAAATTGGCCTCAGGTGTTGAGTCCAGA...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp AAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCGTCCCTAGTTTTCCCTaGCAGAAGAGTCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KLCFWESRPSPLPFQKTAVPSFP*QKSLWG
Trigger: ACCCCAGAGACTCTTCTGTCAGGGAAAACTAGGGAC...GGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGCGAGCACAACTACGTTaGCACATTCTAGGACCAAGT +
Preference number: 4 (lower is better)
Translates to: SRPSPLPFQKTASLSTQVRAQLR*HILGPS
Trigger: ACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCG...CACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCACGAGCACAACTACGTTaGCACATTCTAGGACCAAGT +
Preference number: 4 (lower is better)
Translates to: FQKTASLSTQVSRLQSRARAQLR*HILGPS
Trigger: ACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCG...TGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGACGAGCACAACTACGTTaGCACATTCTAGGACCAAGT +
Preference number: 4 (lower is better)
Translates to: RSFLGLNKVPICPFGLWRRAQLR*HILGPS
Trigger: ACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCG...TCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGGTCCCATCTAAGCTATaGTTCTGGGAATCCAGACCA +
Preference number: 4 (lower is better)
Translates to: SGVSLQAKKGRTGQNCPLVPSKL*FWESRP
Trigger: TGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGAC...CAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGTCCCATCTAAGCTATaGTTCTGGGAATCCAGACCA +
Preference number: 4 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCVPSKL*FWESRP
Trigger: TGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGAC...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAACTTTGCAGAAGGATGTaGAGAGCGGCAATTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SQSNSIQTGRLSPVPHSQLCRRM*RAAIEK
Trigger: CTTCTCAATTGCCGCTCTGCACATCCTTCTGCAAAG...TTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp TTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAAGTTCATCGGAGACCTaGGTGAAGCGTTGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FLGLNKVPICPFGLWRARSSSET*VKRCWA
Trigger: AGCCCAACAACGCTTCACCCAGGTCTCCGATGAACT...TCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCCACTTGTCCCACCAGTaGTTCCATCTCCTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: WSHLSYASGNPDQALYPFHLSHQ*FHLLVD
Trigger: GTCAACAAGGAGATGGAACCACTGGTGGGACAAGTG...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GCCCTACTTCCGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCAGAGCCCTCGGTCTaGATACAATGTTTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: ALLPLLPWPKQSPYLSLWAEPSV*IQCFSL
Trigger: TAGAGAGAAACATTGTATCCAGACCGAGGGCTCTGC...CCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCGGAAGTAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTTGCCAATCACTTTCTaGAAAGAAGCAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: KTASLSTQVSRLQSRAFWLPITF*KEAAEP
Trigger: GGGCTCTGCTGCTTCTTTCCAGAAAGTGATTGGCAA...CCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp ACCACAGGCAGGGTTCTAGAGCACTGTGTCAGAAAGTTAGCATTGGAGAGCAGCTCACCCTCACACCCATaGGATTCAGATCTGAAATGG +
Preference number: 4 (lower is better)
Translates to: TTGRVLEHCVRKLALESSSPSHP*DSDLKW
Trigger: CCATTTCAGATCTGAATCCCATGGGTGTGAGGGTGA...GCTGCTCTCCAATGCTAACTTTCTGACACAGTGCTCTAGAACCCTGCCTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAAGCATAGGCCAGTCCTaGAGTACCCATCACCCTCAC +
Preference number: 4 (lower is better)
Translates to: SWPRANPKELYGSRRESLSIGQS*STHHPH
Trigger: GTGAGGGTGATGGGTACTCCAGGACTGGCCTATGCT...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GATTCAGATCTGAAATGGTCATCTCAAGGCATCAACAGTCTCACTGAGACACAGCACCTGAGGCCAATTTaGTCCCACGTTCTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: DSDLKWSSQGINSLTETQHLRPI*SHVLAS
Trigger: GCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTG...CTGTGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGATCAAAAGCAGAAGTCTaGACTCAACACCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RSFLGLNKVPICPFGLWRSKAEV*TQHLRP
Trigger: TGGCCTCAGGTGTTGAGTCCAGACTTCTGCTTTTGA...TCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAAACCCCCCAATTTGGAGCCGATaGTCTAGTCAGTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GLNKVPICPFGLWRARNPPIWSR*SSQWFS
Trigger: GGAAAACCACTGACTAGACCATCGGCTCCAAATTGG...GGGGTTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp ACCACAGGCAGGGTTCTAGAGCACTGTGTCAGAAAGTTAGCATTGGAGAGCAGCCCAATTTGGAGCCGATaGTCTAGTCAGTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TTGRVLEHCVRKLALESSPIWSR*SSQWFS
Trigger: GGAAAACCACTGACTAGACCATCGGCTCCAAATTGG...GCTGCTCTCCAATGCTAACTTTCTGACACAGTGCTCTAGAACCCTGCCTGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGCCAATTTGGAGCCGATaGTCTAGTCAGTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: ENSLSFHPGVKASEQGILPIWSR*SSQWFS
Trigger: GGAAAACCACTGACTAGACCATCGGCTCCAAATTGG...CAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCTAAGCTATGCTTCTaGGAATCCAGACCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SRPSPLPFQKTASLSTQVSKLCF*ESRPSP
Trigger: AGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGA...CACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTTCTAAGCTATGCTTCTaGGAATCCAGACCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCSKLCF*ESRPSP
Trigger: AGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGA...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTCTCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACATACTCAGCCTTCTTaGCCAAGAGCTAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: VSGVSLQAKKGRTGQNCPHTQPS*PRANPK
Trigger: CTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATG...TGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCCATACTCAGCCTTCTTaGCCAAGAGCTAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: QTKPFTLSENSLSFHPGVHTQPS*PRANPK
Trigger: CTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATG...GACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCGGAATGTTTTCTCCTTaGGGAATCCCATCACCACCA +
Preference number: 4 (lower is better)
Translates to: WSHLSYASGNPDQALYPFGMFSP*GIPSPP
Trigger: TGGTGGTGATGGGATTCCTCAAGGAGAAAACATTCC...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp GGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAAACCCCCATGGGATTCAGATCTaGAATGGTCATCTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GLNKVPICPFGLWRARNPHGIQI*NGHLKA
Trigger: TGCCTTGAGATGACCATTTCAGATCTGAATCCCATG...GGGGTTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCCATGGGATTCAGATCTaGAATGGTCATCTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LLPWPKQSPYLSLWALESHGIQI*NGHLKA
Trigger: TGCCTTGAGATGACCATTTCAGATCTGAATCCCATG...GCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp ACCACAGGCAGGGTTCTAGAGCACTGTGTCAGAAAGTTAGCATTGGAGAGCAGCCATGGGATTCAGATCTaGAATGGTCATCTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: TTGRVLEHCVRKLALESSHGIQI*NGHLKA
Trigger: TGCCTTGAGATGACCATTTCAGATCTGAATCCCATG...GCTGCTCTCCAATGCTAACTTTCTGACACAGTGCTCTAGAACCCTGCCTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCCATGGGATTCAGATCTaGAATGGTCATCTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: QTKPFTLSENSLSFHPGVHGIQI*NGHLKA
Trigger: TGCCTTGAGATGACCATTTCAGATCTGAATCCCATG...GACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTAACGAAAAAGCCATAATCTaGAGCTGTTCTAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: QPLFPPRCQGFRAGHFGNEKAII*SCSRGL
Trigger: CAGTCCTCTAGAACAGCTTCAGATTATGGCTTTTTC...GTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAAGAACTCATCTCCAGCTaGCCGCATGGCTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LKIGNHTQPSWPRANPKEELISS*PHGLVQ
Trigger: CTGCACCAAGCCATGCGGGCAGCTGGAGATGAGTTC...TTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGACTCTCAGCACACAGTaGAGCCCCAAAGACAAAGAA +
Preference number: 4 (lower is better)
Translates to: NPDQALYPFRKQPLFPPRTLSTQ*SPKDKE
Trigger: TTCTTTGTCTTTGGGGCTGCACTGTGTGCTGAGAGT...CCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCACTCTCAGCACACAGTaGAGCCCCAAAGACAAAGAA +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGTLSTQ*SPKDKE
Trigger: TTCTTTGTCTTTGGGGCTGCACTGTGTGCTGAGAGT...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAAGCCCATCCTGTTCCATaGCCACCCATCCACCAACTC +
Preference number: 4 (lower is better)
Translates to: LKIGNHTQPSWPRANPKEAHPVP*PPIHQL
Trigger: GAGTTGGTGGATGGGTGGGCATGGAACAGGATGGGC...TTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCCTTCCTAATGGAATACAGCTaGTTATGTAAGTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: VGSGINNRRTELPYFRSFLMEYS*LCKSTF
Trigger: GAAGGTGGACTTACATAAGCAGCTGTATTCCATTAG...GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GCCCTACTTCCGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGCATTCCAAAGGGATGTaGCTTCTGCGTTCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: ALLPLLPWPKQSPYLSLWHSKGM*LLRSLN
Trigger: ATTTAGGGAACGCAGAAGGCACATCCCTTTGGAATG...CCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCGGAAGTAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCACTCTAGAACCCATATaGCTGGCCCCTGATAAAGCC +
Preference number: 4 (lower is better)
Translates to: YASGNPDQALYPFRKQPLTLEPI*LAPDKA
Trigger: GGCTTTATCAGGGGCCAGGCATATGGGTTCTAGAGT...GAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GATTCAGATCTGAAATGGTCATCTCAAGGCATCAACAGTCTCACTGAGACACAGAGACCAAGTGGCACATaGAGCCTACCACCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: DSDLKWSSQGINSLTETQRPSGT*SLPPPL
Trigger: TAGGGGAGGTGGTAGGCTGCATGTGCCACTTGGTCT...CTGTGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACTGTTTGAGGGCAAATTaGCCAGCCTGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANCLRAN*PACSAP
Trigger: GGGAGCTGAGCAGGCTGGGCAATTTGCCCTCAAACA...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCGTCCCATCTAAGCTATaGTTCTGGGAATCCAGACCA +
Preference number: 4 (lower is better)
Translates to: WSHLSYASGNPDQALYPFVPSKL*FWESRP
Trigger: TGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGAC...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GCTGGCTCTGAGTTTCTGGTGTCAGCATACTCACAACAAGACCAAGTGGCACATAGGACAGGTCAAAATTaGCCACTGTGGTCCCATCTA +
Preference number: 4 (lower is better)
Translates to: AGSEFLVSAYSQQDQVAHRTGQN*PLWSHL
Trigger: TAGATGGGACCACAGTGGGCAATTTTGACCTGTCCT...ATGTGCCACTTGGTCTTGTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAATGGGTGAAGCGTTGTTaGGCTGAGCCTGGGGTCACA +
Preference number: 4 (lower is better)
Translates to: LKIGNHTQPSWPRANPKEWVKRC*AEPGVT
Trigger: TGTGACCCCAGGCTCAGCCCAACAACGCTTCACCCA...TTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCTGACAGATTCCAATCGCCTACCTaGCCTACTCAGCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: NPKELYGSRRESLVFPDRFQSPT*PTQLPH
Trigger: GTGAGGGAGCTGAGTAGGCCAGGTAGGCGATTGGAA...TCTGTCAGGGAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGGCAGAGCCCTCGGTCTaGATACAATGTTTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: VPSKLCFWESRPSPLPFQAEPSV*IQCFSL
Trigger: TAGAGAGAAACATTGTATCCAGACCGAGGGCTCTGC...CTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCTCAAGGCATCAACAGTCTCACTGAGACACAGTGTGGGACCCAGACTGTATTCTTGCCAATCACTTTCTaGAAAGAAGCAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SQGINSLTETQCGTQTVFLPITF*KEAAEP
Trigger: GGGCTCTGCTGCTTCTTTCCAGAAAGTGATTGGCAA...GAATACAGTCTGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCATTGCCAATCACTTTCTaGAAAGAAGCAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: GIQTKPFTLSENSLSFHPLPITF*KEAAEP
Trigger: GGGCTCTGCTGCTTCTTTCCAGAAAGTGATTGGCAA...TGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GCCCTACTTCCGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGAGAGGTCCCAGAGATTaGAAACACTTTAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: ALLPLLPWPKQSPYLSLWRGPRD*KHFRHH
Trigger: ATGGTGCCTAAAGTGTTTCCAATCTCTGGGACCTCT...CCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCGGAAGTAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGAGAGGTCCCAGAGATTaGAAACACTTTAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: KTASLSTQVSRLQSRAFWRGPRD*KHFRHH
Trigger: ATGGTGCCTAAAGTGTTTCCAATCTCTGGGACCTCT...CCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAGAGGTCCCAGAGATTaGAAACACTTTAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: LLPWPKQSPYLSLWALESRGPRD*KHFRHH
Trigger: ATGGTGCCTAAAGTGTTTCCAATCTCTGGGACCTCT...GCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAATTTAGAGTTTCAGTTTaGGTACAGAGGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GPTFWRAQLRCHILGPSEFRVSV*VQRSQR
Trigger: TCTCTGGGACCTCTGTACCCAAACTGAAACTCTAAA...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCACCCTCACACCCATaGGATTCAGATCTGAAATGG +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGSPSHP*DSDLKW
Trigger: CCATTTCAGATCTGAATCCCATGGGTGTGAGGGTGA...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCATCACCCTCACACCCATaGGATTCAGATCTGAAATGG +
Preference number: 4 (lower is better)
Translates to: GIQTKPFTLSENSLSFHPSPSHP*DSDLKW
Trigger: CCATTTCAGATCTGAATCCCATGGGTGTGAGGGTGA...TGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CAGTTTGGGTACAGAGGTCCCAGAGATTGGAAACACTTTAGGCACCATTGTGCCTCAAAAGCAGAAGTCTaGACTCAACACCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: QFGYRGPRDWKHFRHHCASKAEV*TQHLRP
Trigger: TGGCCTCAGGTGTTGAGTCCAGACTTCTGCTTTTGA...GGCACAATGGTGCCTAAAGTGTTTCCAATCTCTGGGACCTCTGTACCCAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCTCAAGGCATCAACAGTCTCACTGAGACACAGTGTGGGACCCAGACTGTATTCCTGGCTCTGAGTTTCTaGTGTCAGCATACTCACAAC +
Preference number: 4 (lower is better)
Translates to: SQGINSLTETQCGTQTVFLALSF*CQHTHN
Trigger: GTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAG...GAATACAGTCTGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGAACTGGCTCTGAGTTTCTaGTGTCAGCATACTCACAAC +
Preference number: 4 (lower is better)
Translates to: QDRSKLPTVVPSKLCFWELALSF*CQHTHN
Trigger: GTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAG...TTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCTTGGTAACCTGGCCATaGTCCCTGCAGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PRANPKELYGSRRESLVFLVTWP*SLQLLL
Trigger: CAAGAGGAGCTGCAGGGACCATGGCCAGGTTACCAA...GAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCTGACAGAGGCATTTTGGTAACCTaGCCATGGTCCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NPKELYGSRRESLVFPDRGILVT*PWSLQL
Trigger: GAGCTGCAGGGACCATGGCCAGGTTACCAAAATGCC...TCTGTCAGGGAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GCTGGCTCTGAGTTTCTGGTGTCAGCATACTCACAACAAGACCAAGTGGCACATCATACTCAGCCTTCTTaGCCAAGAGCTAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: AGSEFLVSAYSQQDQVAHHTQPS*PRANPK
Trigger: CTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATG...ATGTGCCACTTGGTCTTGTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CAGTTTGGGTACAGAGGTCCCAGAGATTGGAAACACTTTAGGCACCATTGTGCCCATACTCAGCCTTCTTaGCCAAGAGCTAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: QFGYRGPRDWKHFRHHCAHTQPS*PRANPK
Trigger: CTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATG...GGCACAATGGTGCCTAAAGTGTTTCCAATCTCTGGGACCTCTGTACCCAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATCCCTATTTGTCCCTTTaGGCTCTGGAGAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: AKKGRTGQNCPLWSHLSYPYLSL*ALESKK
Trigger: TTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGG...ATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TTTCCTTGGCGAAAAATTCTGCTCAGAACTAGCATCCTTTGCCAAGGCTTGCCTCCTGCAGGCACTCCTTaGGTGTGTATTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: FPWRKILLRTSILCQGLPPAGTP*VCILSS
Trigger: AGAGGACAGAATACACACCCAAGGAGTGCCTGCAGG...AGGCAAGCCTTGGCAAAGGATGCTAGTTCTGAGCAGAATTTTTCGCCAAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR TCA 90 bp ATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATCCTCTCCCTATCACCTaGGAACCCCTAAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: IGNHTQPSWPRANPKELYPLPIT*EPLSFH
Trigger: ATGGAAGCTTAGGGGTTCTCAGGTGATAGGGAGAGG...ATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTATTTCTCTCTAAGCCTTaGGGCATCAGGACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SWPRANPKELYGSRRESLFLSKP*GIRTRA
Trigger: TGCCCTTGTCCTGATGCCTCAAGGCTTAGAGAGAAA...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCACATTCTAGGACCAAGTaGAAATCTCCAAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: FQKTASLSTQVSRLQSRAHSRTK*KSPRRV
Trigger: GACTCTTCTTGGAGATTTTCACTTGGTCCTAGAATG...TGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTCATTCTAGGACCAAGTaGAAATCTCCAAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCHSRTK*KSPRRV
Trigger: GACTCTTCTTGGAGATTTTCACTTGGTCCTAGAATG...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTAACCTAATGGAATACAGCTaGTTATGTAAGTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: QPLFPPRCQGFRAGHFGNLMEYS*LCKSTF
Trigger: GAAGGTGGACTTACATAAGCAGCTGTATTCCATTAG...GTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTCAAGGCATCAACAGTCTCACTGAGACACAGTGTGGGACCCAGACTGTATTCCATTCCAAAGGGATGTaGCTTCTGCGTTCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: SQGINSLTETQCGTQTVFHSKGM*LLRSLN
Trigger: ATTTAGGGAACGCAGAAGGCACATCCCTTTGGAATG...GAATACAGTCTGGGTCCCACACTGTGTCTCAGTGAGACTGTTGATGCCTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCCATTCCAAAGGGATGTaGCTTCTGCGTTCCCTAAAT +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGHSKGM*LLRSLN
Trigger: ATTTAGGGAACGCAGAAGGCACATCCCTTTGGAATG...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAAACCCCTTCTCTCCAAAGCCTTaGCAATCACTTTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GLNKVPICPFGLWRARNPFSPKP*QSLSGK
Trigger: CTTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAA...GGGGTTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAGCAGAGCCCTCGGTCTaGATACAATGTTTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: FLGLNKVPICPFGLWRARAEPSV*IQCFSL
Trigger: TAGAGAGAAACATTGTATCCAGACCGAGGGCTCTGC...TCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAGAGGTCCCAGAGATTaGAAACACTTTAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: VPSKLCFWESRPSPLPFQRGPRD*KHFRHH
Trigger: ATGGTGCCTAAAGTGTTTCCAATCTCTGGGACCTCT...CTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp ACCTGGGGAAGGAAGCACAGACTCCAATTTGGAGCCGATGGTCTAGTCAGTGGTGATTCAGATCTGAAATaGTCATCTCAAGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: TWGRKHRLQFGADGLVSGDSDLK*SSQGIN
Trigger: GTTGATGCCTTGAGATGACCATTTCAGATCTGAATC...ACCACTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGCTTCCTTCCCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTCACCCTCACACCCATaGGATTCAGATCTGAAATGG +
Preference number: 4 (lower is better)
Translates to: YASGNPDQALYPFRKQPLSPSHP*DSDLKW
Trigger: CCATTTCAGATCTGAATCCCATGGGTGTGAGGGTGA...GAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGATCAAAAGCAGAAGTCTaGACTCAACACCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLGLNKVPICPFGLWRARSKAEV*TQHLRP
Trigger: TGGCCTCAGGTGTTGAGTCCAGACTTCTGCTTTTGA...TCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAAGGCATTTTGGTAACCTaGCCATGGTCCCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LKIGNHTQPSWPRANPKEGILVT*PWSLQL
Trigger: GAGCTGCAGGGACCATGGCCAGGTTACCAAAATGCC...TTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGCAAAATTGCCCACTGTaGTCCCATCTAAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: NPDQALYPFRKQPLFPPRQNCPL*SHLSYA
Trigger: AGCATAGCTTAGATGGGACCACAGTGGGCAATTTTG...CCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACTTTCTCTCTAAGCCTTaGGGCATCAGGACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANFLSKP*GIRTRA
Trigger: TGCCCTTGTCCTGATGCCTCAAGGCTTAGAGAGAAA...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp AATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGCATTCTAGGACCAAGTaGAAATCTCCAAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: NPDQALYPFRKQPLFPPRHSRTK*KSPRRV
Trigger: GACTCTTCTTGGAGATTTTCACTTGGTCCTAGAATG...CCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGACTAATGGAATACAGCTaGTTATGTAAGTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RSFLGLNKVPICPFGLWRLMEYS*LCKSTF
Trigger: GAAGGTGGACTTACATAAGCAGCTGTATTCCATTAG...TCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GCTGGCTCTGAGTTTCTGGTGTCAGCATACTCACAACAAGACCAAGTGGCACATTTCTCTCCAAAGCCTTaGCAATCACTTTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: AGSEFLVSAYSQQDQVAHFSPKP*QSLSGK
Trigger: CTTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAA...ATGTGCCACTTGGTCTTGTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAAGGACAGGTCAAAATTaGCCACTGTGGTCCCATCTA +
Preference number: 4 (lower is better)
Translates to: SWPRANPKELYGSRRESLRTGQN*PLWSHL
Trigger: TAGATGGGACCACAGTGGGCAATTTTGACCTGTCCT...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGAAAATAGTGTTTGTGTaGCCTAGAATAAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SGVSLQAKKGRTGQNCPLKIVFV*PRISGE
Trigger: CTCCCCACTTATTCTAGGGCACACAAACACTATTTT...CAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGAAAATAGTGTTTGTGTaGCCTAGAATAAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PSPLPFQKTASLSTQVSRKIVFV*PRISGE
Trigger: CTCCCCACTTATTCTAGGGCACACAAACACTATTTT...CCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAAAAATAGTGTTTGTGTaGCCTAGAATAAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RSFLGLNKVPICPFGLWRKIVFV*PRISGE
Trigger: CTCCCCACTTATTCTAGGGCACACAAACACTATTTT...TCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GATTCAGATCTGAAATGGTCATCTCAAGGCATCAACAGTCTCACTGAGACACAGCACTTGTCCCACCAGTaGTTCCATCTCCTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: DSDLKWSSQGINSLTETQHLSHQ*FHLLVD
Trigger: GTCAACAAGGAGATGGAACCACTGGTGGGACAAGTG...CTGTGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGCAGAGCCCTCGGTCTaGATACAATGTTTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: SWPRANPKELYGSRRESLAEPSV*IQCFSL
Trigger: TAGAGAGAAACATTGTATCCAGACCGAGGGCTCTGC...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTTTAGAGTTTCAGTTTaGGTACAGAGGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GNHTQPSWPRANPKELYGFRVSV*VQRSQR
Trigger: TCTCTGGGACCTCTGTACCCAAACTGAAACTCTAAA...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGGATTCAGATCTGAAATaGTCATCTCAAGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: KTASLSTQVSRLQSRAFWDSDLK*SSQGIN
Trigger: GTTGATGCCTTGAGATGACCATTTCAGATCTGAATC...CCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCGATTCAGATCTGAAATaGTCATCTCAAGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: QTKPFTLSENSLSFHPGVDSDLK*SSQGIN
Trigger: GTTGATGCCTTGAGATGACCATTTCAGATCTGAATC...GACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACGCACAGACTCCAATTTaGAGCCGATGGTCTAGTCAG +
Preference number: 4 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANAQTPI*SRWSSQ
Trigger: CTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGC...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAAGGCATTTTGGTAACCTaGCCTACTCAGCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LKIGNHTQPSWPRANPKEGILVT*PTQLPH
Trigger: GTGAGGGAGCTGAGTAGGCCAGGTTACCAAAATGCC...TTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556100.3
CDS-3UTR TCA 90 bp CCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCGGAATGTTTTCTCCTTaGGGAATCCCATCACCACCA +
Preference number: 4 (lower is better)
Translates to: PRANPKELYGSRRESLVFGMFSP*GIPSPP
Trigger: TGGTGGTGATGGGATTCCTCAAGGAGAAAACATTCC...GAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp ATGGATTTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCTTTCTCTCTAAGCCTTaGGGCATCAGGACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: MDLKIGNHTQPSWPRANPFLSKP*GIRTRA
Trigger: TGCCCTTGTCCTGATGCCTCAAGGCTTAGAGAGAAA...GGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAAATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp TATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCGAAAAAGCCATAATCTaGAGCTGTTCTAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: YASGNPDQALYPFRKQPLEKAII*SCSRGL
Trigger: CAGTCCTCTAGAACAGCTTCAGATTATGGCTTTTTC...GAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp ATGGATTTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCATAACCTACAAAGTCTaGCACCAGAGCCCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: MDLKIGNHTQPSWPRANPITYKV*HQSPCV
Trigger: GACACACGGGCTCTGGTGGCAGACTTTGTAGGTTAT...GGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAAATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp AATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGCTAATGGAATACAGCTaGTTATGTAAGTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: NPDQALYPFRKQPLFPPRLMEYS*LCKSTF
Trigger: GAAGGTGGACTTACATAAGCAGCTGTATTCCATTAG...CCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CAGTTTGGGTACAGAGGTCCCAGAGATTGGAAACACTTTAGGCACCATTGTGCCAATACCATGAAAAAGTaGAGCCCTCTCTCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: QFGYRGPRDWKHFRHHCANTMKK*SPLSKA
Trigger: TGCTTTTGAGAGAGGGCTGCACTTTTTCATGGTATT...GGCACAATGGTGCCTAAAGTGTTTCCAATCTCTGGGACCTCTGTACCCAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp GCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATAATACCATGAAAAAGTaGAGCCCTCTCTCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: AKKGRTGQNCPLWSHLSYNTMKK*SPLSKA
Trigger: TGCTTTTGAGAGAGGGCTGCACTTTTTCATGGTATT...ATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CAGTTTGGGTACAGAGGTCCCAGAGATTGGAAACACTTTAGGCACCATTGTGCCAAAATAGTGTTTGTGTaGCCTAGAATAAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QFGYRGPRDWKHFRHHCAKIVFV*PRISGE
Trigger: CTCCCCACTTATTCTAGGGCACACAAACACTATTTT...GGCACAATGGTGCCTAAAGTGTTTCCAATCTCTGGGACCTCTGTACCCAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACTTGCCAATCACTTTCTaGAAAGAAGCAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANLPITF*KEAAEP
Trigger: GGGCTCTGCTGCTTCTTTCCAGAAAGTGATTGGCAA...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp TTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGATTTAGAGTTTCAGTTTaGGTACAGAGGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: FLGLNKVPICPFGLWRARFRVSV*VQRSQR
Trigger: TCTCTGGGACCTCTGTACCCAAACTGAAACTCTAAA...TCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AATAAGTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTGATTCAGATCTGAAATaGTCATCTCAAGGCATCAAC +
Preference number: 4 (lower is better)
Translates to: NKWGVGLIIAGPSCPTSADSDLK*SSQGIN
Trigger: GTTGATGCCTTGAGATGACCATTTCAGATCTGAATC...AGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCACTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCTGACAGATCAAAAGCAGAAGTCTaGACTCAACACCTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NPKELYGSRRESLVFPDRSKAEV*TQHLRP
Trigger: TGGCCTCAGGTGTTGAGTCCAGACTTCTGCTTTTGA...TCTGTCAGGGAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACCTGGCTCTGAGTTTCTaGTGTCAGCATACTCACAAC +
Preference number: 4 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANLALSF*CQHTHN
Trigger: GTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAG...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCTCTAAGCTATGCTTCTaGGAATCCAGACCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PRANPKELYGSRRESLVFSKLCF*ESRPSP
Trigger: AGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGA...GAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp AATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCTGACAGACATACTCAGCCTTCTTaGCCAAGAGCTAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: NPKELYGSRRESLVFPDRHTQPS*PRANPK
Trigger: CTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATG...TCTGTCAGGGAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCCTATTTGTCCCTTTaGGCTCTGGAGAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PRANPKELYGSRRESLVFPYLSL*ALESKK
Trigger: TTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGG...GAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTATTCTCTCCAAAGCCTTaGCAATCACTTTCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SWPRANPKELYGSRRESLFSPKP*QSLSGK
Trigger: CTTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAA...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp ATGGATTTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAGGACAGGTCAAAATTaGCCACTGTGGTCCCATCTA +
Preference number: 4 (lower is better)
Translates to: MDLKIGNHTQPSWPRANPRTGQN*PLWSHL
Trigger: TAGATGGGACCACAGTGGGCAATTTTGACCTGTCCT...GGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAAATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCAAAATAGTGTTTGTGTaGCCTAGAATAAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: YASGNPDQALYPFRKQPLKIVFV*PRISGE
Trigger: CTCCCCACTTATTCTAGGGCACACAAACACTATTTT...GAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTCCCATGCAAACAGTGTaGCTTCAAATAAATCATAAA +
Preference number: 4 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCPMQTV*LQINHK
Trigger: TTTATGATTTATTTGAAGCCACACTGTTTGCATGGG...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp GTCTCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACCCATGCAAACAGTGTaGCTTCAAATAAATCATAAA +
Preference number: 4 (lower is better)
Translates to: VSGVSLQAKKGRTGQNCPPMQTV*LQINHK
Trigger: TTTATGATTTATTTGAAGCCACACTGTTTGCATGGG...TGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp ATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATCAAAATTGCCCACTGTaGTCCCATCTAAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: IGNHTQPSWPRANPKELYQNCPL*SHLSYA
Trigger: AGCATAGCTTAGATGGGACCACAGTGGGCAATTTTG...ATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCAAAATTGCCCACTGTaGTCCCATCTAAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: PRANPKELYGSRRESLVFQNCPL*SHLSYA
Trigger: AGCATAGCTTAGATGGGACCACAGTGGGCAATTTTG...GAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp ATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGAAAAAGCCATAATCTaGAGCTGTTCTAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: IGNHTQPSWPRANPKELYEKAII*SCSRGL
Trigger: CAGTCCTCTAGAACAGCTTCAGATTATGGCTTTTTC...ATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR TCA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACGAAAAAGCCATAATCTaGAGCTGTTCTAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANEKAII*SCSRGL
Trigger: CAGTCCTCTAGAACAGCTTCAGATTATGGCTTTTTC...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp TTTCCTTGGCGAAAAATTCTGCTCAGAACTAGCATCCTTTGCCAAGGCTTGCCTCTTGGCGAAAAATTCTaGTCAGAACTAGCATCCTTT +
Preference number: 4 (lower is better)
Translates to: FPWRKILLRTSILCQGLPLGEKF*SELASF
Trigger: AAAGGATGCTAGTTCTGAGCAGAATTTTTCGCCAAG...AGGCAAGCCTTGGCAAAGGATGCTAGTTCTGAGCAGAATTTTTCGCCAAGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CCA 90 bp GCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATCCCATGCAAACAGTGTaGCTTCAAATAAATCATAAA +
Preference number: 4 (lower is better)
Translates to: AKKGRTGQNCPLWSHLSYPMQTV*LQINHK
Trigger: TTTATGATTTATTTGAAGCCACACTGTTTGCATGGG...ATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp CAGTTTGGGTACAGAGGTCCCAGAGATTGGAAACACTTTAGGCACCATTGTGCCCCCATGCAAACAGTGTaGCTTCAAATAAATCATAAA +
Preference number: 4 (lower is better)
Translates to: QFGYRGPRDWKHFRHHCAPMQTV*LQINHK
Trigger: TTTATGATTTATTTGAAGCCACACTGTTTGCATGGG...GGCACAATGGTGCCTAAAGTGTTTCCAATCTCTGGGACCTCTGTACCCAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CCA 90 bp ATGGATTTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCCAAAATTGCCCACTGTaGTCCCATCTAAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: MDLKIGNHTQPSWPRANPQNCPL*SHLSYA
Trigger: AGCATAGCTTAGATGGGACCACAGTGGGCAATTTTG...GGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAAATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR GCA 90 bp CCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCAATACCATGAAAAAGTaGAGCCCTCTCTCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: PRANPKELYGSRRESLVFNTMKK*SPLSKA
Trigger: TGCTTTTGAGAGAGGGCTGCACTTTTTCATGGTATT...GAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 90 bp CCTGGCCAGCGTGGAGCCCTCAGCCAGTCTCCAACCCCGCCCGCCTaGCAGGTTAGGGATCTCACGGGTCAGGCCGCTGCCGGGATCCGG +
Preference number: 5 (lower is better)
Translates to: PGQRGALSQSPTPPA*QVRDLTGQAAAGIR
Trigger: CCGGATCCCGGCAGCGGCCTGACCCGTGAGATCCCTAACCTGGCAGGCGGGCGGGGTTGGAGACTGGCTGAGGGCTCCACGCTGGCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679000.1
CDS CCA 90 bp CGCCGGAAGCGGGTCTCGAACTCATCTCCAGCTGCCCGCATGGCTTaGTGCAGCGGGTCAGCTGCTGGGCCCTCCCCGGGGCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: RRKRVSNSSPAARMA*CSGSAAGPSPGPAP
Trigger: TGGAGCTGGCCCCGGGGAGGGCCCAGCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGCTGGAGATGAGTTCGAGACCCGCTTCCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS CCA 90 bp AGGTGCGCCGGAAGCGGGTCTCGAACTCATCTCCAGCTGCCCGCATaGCTTGGTGCAGCGGGTCAGCTGCTGGGCCCTCCCCGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RCAGSGSRTHLQLPA*LGAAGQLLGPPRGQ
Trigger: CTGGCCCCGGGGAGGGCCCAGCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGCTGGAGATGAGTTCGAGACCCGCTTCCGGCGCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 90 bp CGGAAGCGGGTCTCGAACTCATCTCCAGCTGCCCGCATGGCTTGGTaGAGCGGGTCAGCTGCTGGGCCCTCCCCGGGGCCAGCTCCACAG +
Preference number: 5 (lower is better)
Translates to: RKRVSNSSPAARMAW*SGSAAGPSPGPAPQ
Trigger: CTGTGGAGCTGGCCCCGGGGAGGGCCCAGCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGCTGGAGATGAGTTCGAGACCCGCTTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS CCA 90 bp TCCGGGCGGCCAGCCGGGATGGCAGCTCTTAAGACACAGCACTGGTaGCAAGGAGCCCCCAGCTGGGGCCTTTCATCCTCCTGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: SGRPAGMAALKTQHW*QGAPSWGLSSSWPA
Trigger: CGCTGGCCAGGAGGATGAAAGGCCCCAGCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTTAAGAGCTGCCATCCCGGCTGGCCGCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000250405.10
ENST00000553824.5
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 90 bp ATCAGAGAAGGTGCGCCGGAAGCGGGTCTCGAACTCATCTCCAGCTaGCCGCATGGCTTGGTGCAGCGGGTCAGCTGCTGGGCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: IREGAPEAGLELISS*PHGLVQRVSCWALP
Trigger: GGGGAGGGCCCAGCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGCTGGAGATGAGTTCGAGACCCGCTTCCGGCGCACCTTCTCTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS CCA 90 bp CCTCAGCTTATAACCTACAAAGTCTGCCACCAGAGCCCGTGTGTCTaGGGCCGAGGCTGGGGTCGCCATCCGGGCGGCCAGCCGGGATGG +
Preference number: 5 (lower is better)
Translates to: PQLITYKVCHQSPCV*GRGWGRHPGGQPGW
Trigger: CCATCCCGGCTGGCCGCCCGGATGGCGACCCCAGCCTCGGCCCCAGACACACGGGCTCTGGTGGCAGACTTTGTAGGTTATAAGCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000250405.10
ENST00000553824.5
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS CCA 90 bp CTCATCTCCAGCTGCCCGCATGGCTTGGTGCAGCGGGTCAGCTGCTaGGCCCTCCCCGGGGCCAGCTCCACAGACATAACCCTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: LISSCPHGLVQRVSC*ALPGASSTDITLLP
Trigger: AGGCAGAAGGGTTATGTCTGTGGAGCTGGCCCCGGGGAGGGCCCAGCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGCTGGAGATGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 90 bp CTGAGCCTGGGGTCACATGCAGCTGAGCCGCCAGATCAGAGAAGGTaGGCCGGAAGCGGGTCTCGAACTCATCTCCAGCTGCCCGCATGG +
Preference number: 5 (lower is better)
Translates to: LSLGSHAAEPPDQRR*AGSGSRTHLQLPAW
Trigger: CCATGCGGGCAGCTGGAGATGAGTTCGAGACCCGCTTCCGGCGCACCTTCTCTGATCTGGCGGCTCAGCTGCATGTGACCCCAGGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS TCA 90 bp ACCTGGGTGAAGCGTTGTTGGGCTGAGCCTGGGGTCACATGCAGCTaGGCCGCCAGATCAGAGAAGGTGCGCCGGAAGCGGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: TWVKRCWAEPGVTCS*AARSEKVRRKRVSN
Trigger: GTTCGAGACCCGCTTCCGGCGCACCTTCTCTGATCTGGCGGCTCAGCTGCATGTGACCCCAGGCTCAGCCCAACAACGCTTCACCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGTAACAGCTGCCCGCATGGCTaGGTGCAGCGGGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QPLFPPRCQGFRAGHFGNSCPHG*VQRVSC
Trigger: GCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGCT...GTTACCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAACATAGCTAGCTGCCCGCATGGCTaGGTGCAGCGGGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LIPSRRGDSAPYLIPNIASCPHG*VQRVSC
Trigger: GCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGCT...AGCTATGTTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CAA 90 bp GTAACCTGGCCATGGTCCCTGCAGCTCCTCTTGGCTAAAGGTCCCGGGGAATGCCTGTTTGAGGGCAAATaGCCCAGCCTGCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VTWPWSLQLLLAKGPGECLFEGK*PSLLSS
Trigger: GGAGCTGAGCAGGCTGGGCAATTTGCCCTCAAACAG...GCATTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GTAACCTGGCCATGGTCCCTGCAGCTCCTCTTGGCTAAAGGTCCCGGGGAATGCAATCGCAGGACCGAGTaGCCCTACTTCCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VTWPWSLQLLLAKGPGECNRRTE*PYFRSF
Trigger: GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATT...GCATTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CCATCCAGGCTCAACAGCCCTGCCCTTCTATCAGAGCCCAGGAGGCAGCAGCAAAATCGCAGGACCGAGTaGCCCTACTTCCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PSRLNSPALLSEPRRQQQNRRTE*PYFRSF
Trigger: GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATT...TTGCTGCTGCCTCCTGGGCTCTGATAGAAGGGCAGGGCTGTTGAGCCTGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp TTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCAAGCTGCCCGCATGGCTaGGTGCAGCGGGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FQKTASLSTQVSRLQSRASCPHG*VQRVSC
Trigger: GCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGCT...TGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp ACCACAGGCAGGGTTCTAGAGCACTGTGTCAGAAAGTTAGCATTGGAGAGCAGCAGCTGCCCGCATGGCTaGGTGCAGCGGGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TTGRVLEHCVRKLALESSSCPHG*VQRVSC
Trigger: GCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGCT...GCTGCTCTCCAATGCTAACTTTCTGACACAGTGCTCTAGAACCCTGCCTGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 90 bp TCCACAGACATAACCCTTCTGCCTCAGCTTATAACCTACAAAGTCTaGCACCAGAGCCCGTGTGTCTGGGGCCGAGGCTGGGGTCGCCAT +
Preference number: 5 (lower is better)
Translates to: STDITLLPQLITYKV*HQSPCVWGRGWGRH
Trigger: ATGGCGACCCCAGCCTCGGCCCCAGACACACGGGCTCTGGTGGCAGACTTTGTAGGTTATAAGCTGAGGCAGAAGGGTTATGTCTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000250405.10
ENST00000553824.5
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGAAAGCTGCCCGCATGGCTaGGTGCAGCGGGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QDRSKLPTVVPSKLCFWESCPHG*VQRVSC
Trigger: GCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGCT...TTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCCTTCCCATCACCACCAGATTaGCCAGGCAGCCCAGCATGC +
Preference number: 5 (lower is better)
Translates to: VGSGINNRRTELPYFRSFPSPPD*PGSPAC
Trigger: GCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGG...GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS TCA 90 bp CCCTTGAAAAAGTTCATCGGAGACCTGGGTGAAGCGTTGTTGGGCTaGGCCTGGGGTCACATGCAGCTGAGCCGCCAGATCAGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: PLKKFIGDLGEALLG*AWGHMQLSRQIREG
Trigger: ACCTTCTCTGATCTGGCGGCTCAGCTGCATGTGACCCCAGGCTCAGCCCAACAACGCTTCACCCAGGTCTCCGATGAACTTTTTCAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000556599.1
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 90 bp TGTTTAATGACTGTCCTCCCGGGAAACCCAAGGCCAAGGGCTTCCTaGCGACACCATCTCTATTCCCGGTTCCCCCTAGTGCAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: CLMTVLPGNPRPRAS*RHHLYSRFPLVQPK
Trigger: TTTGGGCTGCACTAGGGGGAACCGGGAATAGAGATGGTGTCGGCAGGAAGCCCTTGGCCTTGGGTTTCCCGGGAGGACAGTCATTAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554635.1
CDS-3UTR CAA 90 bp ACCTGGGGAAGGAAGCACAGACTCCAATTTGGAGCCGATGGTCTAGTCAGTGGTCCATCACCACCAGATTaGCCAGGCAGCCCAGCATGC +
Preference number: 5 (lower is better)
Translates to: TWGRKHRLQFGADGLVSGPSPPD*PGSPAC
Trigger: GCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGG...ACCACTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGCTTCCTTCCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGCACACCAGCATGCGTGCAGCTCTGCCAAGCAGTTaGAAAACCACTGGCCTAGTT +
Preference number: 5 (lower is better)
Translates to: PITTRFARQPSMHTSMRAALPSS*KTTGLV
Trigger: AACTAGGCCAGTGGTTTTCAAACTGCTTGGCAGAGC...TGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 90 bp TCAGCCTCCAATCAGAGCCCCCATCTTCCCCCTGGAGACCAGCTTTaGAGAAGGATGTGCAGAGCGGCAATTGAGAAGCTTCTTACCCAG +
Preference number: 5 (lower is better)
Translates to: SASNQSPHLPPGDQL*RRMCRAAIEKLLTQ
Trigger: CTGGGTAAGAAGCTTCTCAATTGCCGCTCTGCACATCCTTCTGCAAAGCTGGTCTCCAGGGGGAAGATGGGGGCTCTGATTGGAGGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CAA 90 bp TCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTCCCTGCAGCTCCTCTaGGCTAAAGGTCCCGGGGAA +
Preference number: 5 (lower is better)
Translates to: SGVSLQAKKGRTGQNCPLSLQLL*AKGPGE
Trigger: TTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGA...CAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CTCAATCTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAACCCCTGGAGACCAGCTTaGCAGAAGGATGTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LNLIPSRRGDSAPYLIPNPWRPA*QKDVQS
Trigger: GCTCTGCACATCCTTCTGCAAAGCTGGTCTCCAGGG...GTTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAGATTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CAA 90 bp GAGAGGAAGAGTTCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAGCTCCAGTGGTTCCATCTCCTaGTTGACACTCTCAGCACAC +
Preference number: 5 (lower is better)
Translates to: ERKSSSSIHCEHYPIPSSSGSIS*LTLSAH
Trigger: GTGTGCTGAGAGTGTCAACAAGGAGATGGAACCACT...GGAGCTGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CAA 90 bp GGTCCCACGTTCTGGCGAGCACAACTACGTTGCCACATTCTAGGACCAAGTGAACATCCACTCCTGCACTaGTCCCACCAGTGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: GPTFWRAQLRCHILGPSEHPLLH*SHQWFH
Trigger: ATGGAACCACTGGTGGGACAAGTGCAGGAGTGGATG...TTCACTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGCCAGAACGTGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp AAGAGGAGAGGAAGAGTTCCAGTTCCATCCACTGCGAGCACTACCCCATACCCACATCCACTCCTGCACTaGTCCCACCAGTGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: KRRGRVPVPSTASTTPYPHPLLH*SHQWFH
Trigger: ATGGAACCACTGGTGGGACAAGTGCAGGAGTGGATG...TGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CAA 90 bp GTAACCTGGCCATGGTCCCTGCAGCTCCTCTTGGCTAAAGGTCCCGGGGAATGCCTTCTCTCCAAAGCCTaGCCAATCACTTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: VTWPWSLQLLLAKGPGECLLSKA*PITFWK
Trigger: TTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAAG...GCATTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGACCATGGCCAGGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CCCATCACCACCAGATTTGCCAGGCAGCCCAGCATGCACACCAGCATGCGTGCAGTCAGAAAGTTAGCATaGGAGAGCAGCAATCTTAGC +
Preference number: 5 (lower is better)
Translates to: PITTRFARQPSMHTSMRAVRKLA*ESSNLS
Trigger: GCTAAGATTGCTGCTCTCCAATGCTAACTTTCTGAC...TGCACGCATGCTGGTGTGCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GCCCTACTTCCGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGACACCTGAGGCCAATTaGGTCCCACGTTCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: ALLPLLPWPKQSPYLSLWTPEAN*VPRSGE
Trigger: CTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGT...CCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCGGAAGTAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCACACCTGAGGCCAATTaGGTCCCACGTTCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: QTKPFTLSENSLSFHPGVTPEAN*VPRSGE
Trigger: CTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGT...GACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGACACCTGAGGCCAATTaGGTCCCACGTTCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: ENSLSFHPGVKASEQGILTPEAN*VPRSGE
Trigger: CTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGT...CAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGACTGTTTGAGGGCAAATaGCCCAGCCTGCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RSFLGLNKVPICPFGLWRLFEGK*PSLLSS
Trigger: GGAGCTGAGCAGGCTGGGCAATTTGCCCTCAAACAG...TCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp ACCTGGGGAAGGAAGCACAGACTCCAATTTGGAGCCGATGGTCTAGTCAGTGGTTCAGAGCAGGGCATTTaGGTAACCTGGCCATGGTCC +
Preference number: 5 (lower is better)
Translates to: TWGRKHRLQFGADGLVSGSEQGI*VTWPWS
Trigger: GGACCATGGCCAGGTTACCAAAATGCCCTGCTCTGA...ACCACTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGCTTCCTTCCCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CCAAAGCCCACAACACAGCATAGGCCAGTCCTGGAGTACCCATCACCCTCACACTCCCTATTTGTCCCTTaGGGCTCTGGAGAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: PKPTTQHRPVLEYPSPSHSLFVP*GSGEQE
Trigger: TTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGA...GTGTGAGGGTGATGGGTACTCCAGGACTGGCCTATGCTGTGTTGTGGGCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAATCGCAGGACCGAGTaGCCCTACTTCCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LLPWPKQSPYLSLWALESNRRTE*PYFRSF
Trigger: GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATT...GCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS TCA 90 bp CCATCCACTCCTGCACTTGTCCCACCAGTGGTTCCATCTCCTTGTTaGCACTCTCAGCACACAGTGCAGCCCCAAAGACAAAGAAGGCTA +
Preference number: 5 (lower is better)
Translates to: PSTPALVPPVVPSPC*HSQHTVQPQRQRRL
Trigger: TAGCCTTCTTTGTCTTTGGGGCTGCACTGTGTGCTGAGAGTGTCAACAAGGAGATGGAACCACTGGTGGGACAAGTGCAGGAGTGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000556599.1
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp AAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGCATCCACTCCTGCACTaGTCCCACCAGTGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: KTASLSTQVSRLQSRAFWHPLLH*SHQWFH
Trigger: ATGGAACCACTGGTGGGACAAGTGCAGGAGTGGATG...CCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GTCTCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACATCCACTCCTGCACTaGTCCCACCAGTGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: VSGVSLQAKKGRTGQNCPHPLLH*SHQWFH
Trigger: ATGGAACCACTGGTGGGACAAGTGCAGGAGTGGATG...TGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGTCATCCACTCCTGCACTaGTCCCACCAGTGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: LGFPFKLRRAGQVKIAHCHPLLH*SHQWFH
Trigger: ATGGAACCACTGGTGGGACAAGTGCAGGAGTGGATG...ACAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGACATCCACTCCTGCACTaGTCCCACCAGTGGTTCCAT +
Preference number: 5 (lower is better)
Translates to: RSFLGLNKVPICPFGLWRHPLLH*SHQWFH
Trigger: ATGGAACCACTGGTGGGACAAGTGCAGGAGTGGATG...TCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp TTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGACCATCACCACCAGATTaGCCAGGCAGCCCAGCATGC +
Preference number: 5 (lower is better)
Translates to: FLGLNKVPICPFGLWRARPSPPD*PGSPAC
Trigger: GCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGG...TCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGACACCTGAGGCCAATTaGGTCCCACGTTCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: VPSKLCFWESRPSPLPFQTPEAN*VPRSGE
Trigger: CTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGT...CTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp TCAACACCTGAGGCCAATTTGGTCCCACGTTCTGGCGAGCACAACTACGTTGCCGCTCTGCCAAGCAGTTaGAAAACCACTGGCCTAGTT +
Preference number: 5 (lower is better)
Translates to: STPEANLVPRSGEHNYVAALPSS*KTTGLV
Trigger: AACTAGGCCAGTGGTTTTCAAACTGCTTGGCAGAGC...GGCAACGTAGTTGTGCTCGCCAGAACGTGGGACCAAATTGGCCTCAGGTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp AATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGCTGTTTGAGGGCAAATaGCCCAGCCTGCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: NPDQALYPFRKQPLFPPRLFEGK*PSLLSS
Trigger: GGAGCTGAGCAGGCTGGGCAATTTGCCCTCAAACAG...CCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GTCTCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCATCAGAGCAGGGCATTTaGGTAACCTGGCCATGGTCC +
Preference number: 5 (lower is better)
Translates to: VSGVSLQAKKGRTGQNCPSEQGI*VTWPWS
Trigger: GGACCATGGCCAGGTTACCAAAATGCCCTGCTCTGA...TGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CTAATTCCATCCAGACGGGGAGACTCAGCCCCGTACCTCATTCCCAACATAGCTTGTGCAGAGCGGCAATaGAGAAGCTTCTTACCCAGC +
Preference number: 5 (lower is better)
Translates to: LIPSRRGDSAPYLIPNIACAERQ*RSFLPS
Trigger: GCTGGGTAAGAAGCTTCTCAATTGCCGCTCTGCACA...AGCTATGTTGGGAATGAGGTACGGGGCTGAGTCTCCCCGTCTGGATGGAATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CAA 90 bp AAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGGGCGAGCACAACTACGTaGCCACATTCTAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: KTASLSTQVSRLQSRAFWASTTT*PHSRTK
Trigger: CTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGC...CCAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCATCAGAGCAGGGCATTTaGGTAACCTGGCCATGGTCC +
Preference number: 5 (lower is better)
Translates to: GIQTKPFTLSENSLSFHPSEQGI*VTWPWS
Trigger: GGACCATGGCCAGGTTACCAAAATGCCCTGCTCTGA...TGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp ACCACAGGCAGGGTTCTAGAGCACTGTGTCAGAAAGTTAGCATTGGAGAGCAGCCAGGACAGGTCAAAATaGCCCACTGTGGTCCCATCT +
Preference number: 5 (lower is better)
Translates to: TTGRVLEHCVRKLALESSQDRSK*PTVVPS
Trigger: AGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG...GCTGCTCTCCAATGCTAACTTTCTGACACAGTGCTCTAGAACCCTGCCTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GTCTCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACAGGACAGGTCAAAATaGCCCACTGTGGTCCCATCT +
Preference number: 5 (lower is better)
Translates to: VSGVSLQAKKGRTGQNCPQDRSK*PTVVPS
Trigger: AGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG...TGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCCAGGACAGGTCAAAATaGCCCACTGTGGTCCCATCT +
Preference number: 5 (lower is better)
Translates to: LLPWPKQSPYLSLWALESQDRSK*PTVVPS
Trigger: AGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG...GCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCTCAGAGCAGGGCATTTaGGTAACCTGGCCTACTCAG +
Preference number: 5 (lower is better)
Translates to: QTKPFTLSENSLSFHPGVSEQGI*VTWPTQ
Trigger: CTGAGTAGGCCAGGTTACCAAAATGCCCTGCTCTGA...GACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556100.3
CDS GCA 90 bp AGGGATGGAAACCCTATTTTCTTTTCTCCAAGACCATGGTTGGTCTaGTTCCCTCACTCGGGCTCCTTGACAGTCTTCATGCCCATCCTG +
Preference number: 5 (lower is better)
Translates to: RDGNPIFFSPRPWLV*FPHSGSLTVFMPIL
Trigger: CAGGATGGGCATGAAGACTGTCAAGGAGCCCGAGTGAGGGAAGCAGACCAACCATGGTCTTGGAGAAAAGAAAATAGGGTTTCCATCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553824.5
CDS CCA 90 bp CCCTCCAGAAGGGATGGAAACCCTATTTTCTTTTCTCCAAGACCATaGTTGGTCTGCTTCCCTCACTCGGGCTCCTTGACAGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: PSRRDGNPIFFSPRP*LVCFPHSGSLTVFM
Trigger: CATGAAGACTGTCAAGGAGCCCGAGTGAGGGAAGCAGACCAACCATGGTCTTGGAGAAAAGAAAATAGGGTTTCCATCCCTTCTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553824.5
CDS-3UTR CAA 90 bp GCCCTACTTCCGCTCCTTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGAGTGGTTCCATCTCCTaGTTGACACTCTCAGCACAC +
Preference number: 5 (lower is better)
Translates to: ALLPLLPWPKQSPYLSLWSGSIS*LTLSAH
Trigger: GTGTGCTGAGAGTGTCAACAAGGAGATGGAACCACT...CCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAAGGAGCGGAAGTAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CCAAAGTTAACATCCTCAGACTCTGAGGTACAGACAAGTAACACCCATGCAAACCCATCACCACCAGATTaGCCAGGCAGCCCAGCATGC +
Preference number: 5 (lower is better)
Translates to: PKLTSSDSEVQTSNTHANPSPPD*PGSPAC
Trigger: GCATGCTGGGCTGCCTGGCAAATCTGGTGGTGATGG...GTTTGCATGGGTGTTACTTGTCTGTACCTCAGAGTCTGAGGATGTTAACTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp ACCACAGGCAGGGTTCTAGAGCACTGTGTCAGAAAGTTAGCATTGGAGAGCAGCAGCAATCTTAGCACCTaGGAAAGTGCAGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: TTGRVLEHCVRKLALESSSNLST*ESAAVR
Trigger: CCTCACTGCTGCACTTTCCAAGGTGCTAAGATTGCT...GCTGCTCTCCAATGCTAACTTTCTGACACAGTGCTCTAGAACCCTGCCTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp TCTGGGGTTTCCCTTCAAGCTAAGAAGGGCAGGACAGGTCAAAATTGCCCACTGAGCAATCTTAGCACCTaGGAAAGTGCAGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: SGVSLQAKKGRTGQNCPLSNLST*ESAAVR
Trigger: CCTCACTGCTGCACTTTCCAAGGTGCTAAGATTGCT...CAGTGGGCAATTTTGACCTGTCCTGCCCTTCTTAGCTTGAAGGGAAACCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGAAACCCCAGCAATCTTAGCACCTaGGAAAGTGCAGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: GLNKVPICPFGLWRARNPSNLST*ESAAVR
Trigger: CCTCACTGCTGCACTTTCCAAGGTGCTAAGATTGCT...GGGGTTTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTCCTTCGTCAGAAAGTTAGCATaGGAGAGCAGCAATCTTAGC +
Preference number: 5 (lower is better)
Translates to: VGSGINNRRTELPYFRSFVRKLA*ESSNLS
Trigger: GCTAAGATTGCTGCTCTCCAATGCTAACTTTCTGAC...GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp AATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGGCGAGCACAACTACGTaGCCACATTCTAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: NPDQALYPFRKQPLFPPRASTTT*PHSRTK
Trigger: CTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGC...CCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp TGGTCCCATCTAAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCGCGAGCACAACTACGTaGCCACATTCTAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: WSHLSYASGNPDQALYPFASTTT*PHSRTK
Trigger: CTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGC...GAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTTAGATGGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GATTCAGATCTGAAATGGTCATCTCAAGGCATCAACAGTCTCACTGAGACACAGTCCCTGCAGCTCCTCTaGGCTAAAGGTCCCGGGGAA +
Preference number: 5 (lower is better)
Translates to: DSDLKWSSQGINSLTETQSLQLL*AKGPGE
Trigger: TTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGA...CTGTGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp AATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCTGACAGATCCCTGCAGCTCCTCTaGGCTAAAGGTCCCGGGGAA +
Preference number: 5 (lower is better)
Translates to: NPKELYGSRRESLVFPDRSLQLL*AKGPGE
Trigger: TTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGA...TCTGTCAGGGAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp ACCACAGGCAGGGTTCTAGAGCACTGTGTCAGAAAGTTAGCATTGGAGAGCAGCTCCCTATTTGTCCCTTaGGGCTCTGGAGAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: TTGRVLEHCVRKLALESSSLFVP*GSGEQE
Trigger: TTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGA...GCTGCTCTCCAATGCTAACTTTCTGACACAGTGCTCTAGAACCCTGCCTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GGCAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGAAACAAAGTCCCTATTaGTCCCTTTGGGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: GRTGQNCPLWSHLSYASGKQSPY*SLWALE
Trigger: CTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTT...CCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp ACCTGGGGAAGGAAGCACAGACTCCAATTTGGAGCCGATGGTCTAGTCAGTGGTAAACAAAGTCCCTATTaGTCCCTTTGGGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: TWGRKHRLQFGADGLVSGKQSPY*SLWALE
Trigger: CTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTT...ACCACTGACTAGACCATCGGCTCCAAATTGGAGTCTGTGCTTCCTTCCCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAAATCGCAGGACCGAGTaGCCCTACTTCCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SWPRANPKELYGSRRESLNRRTE*PYFRSF
Trigger: GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATT...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp TTTCCTTGGCGAAAAATTCTGCTCAGAACTAGCATCCTTTGCCAAGGCTTGCCTCCCTGCAGGCACTCCTaGGGTGTGTATTCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: FPWRKILLRTSILCQGLPPCRHS*GVYSVL
Trigger: GAGGACAGAATACACACCCAAGGAGTGCCTGCAGGG...AGGCAAGCCTTGGCAAAGGATGCTAGTTCTGAGCAGAATTTTTCGCCAAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CAA 90 bp CAGGACAGGTCAAAATTGCCCACTGTGGTCCCATCTAAGCTATGCTTCTGGGAAAGTGGTTCCATCTCCTaGTTGACACTCTCAGCACAC +
Preference number: 5 (lower is better)
Translates to: QDRSKLPTVVPSKLCFWESGSIS*LTLSAH
Trigger: GTGTGCTGAGAGTGTCAACAAGGAGATGGAACCACT...TTCCCAGAAGCATAGCTTAGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp AATAAGTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTAGTGGTTCCATCTCCTaGTTGACACTCTCAGCACAC +
Preference number: 5 (lower is better)
Translates to: NKWGVGLIIAGPSCPTSASGSIS*LTLSAH
Trigger: GTGTGCTGAGAGTGTCAACAAGGAGATGGAACCACT...AGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCACTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp AATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGAGCAATCTTAGCACCTaGGAAAGTGCAGCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: NPDQALYPFRKQPLFPPRSNLST*ESAAVR
Trigger: CCTCACTGCTGCACTTTCCAAGGTGCTAAGATTGCT...CCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GCTGGCTCTGAGTTTCTGGTGTCAGCATACTCACAACAAGACCAAGTGGCACATGCTCTGCCAAGCAGTTaGAAAACCACTGGCCTAGTT +
Preference number: 5 (lower is better)
Translates to: AGSEFLVSAYSQQDQVAHALPSS*KTTGLV
Trigger: AACTAGGCCAGTGGTTTTCAAACTGCTTGGCAGAGC...ATGTGCCACTTGGTCTTGTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CAGTTTGGGTACAGAGGTCCCAGAGATTGGAAACACTTTAGGCACCATTGTGCCGCTCTGCCAAGCAGTTaGAAAACCACTGGCCTAGTT +
Preference number: 5 (lower is better)
Translates to: QFGYRGPRDWKHFRHHCAALPSS*KTTGLV
Trigger: AACTAGGCCAGTGGTTTTCAAACTGCTTGGCAGAGC...GGCACAATGGTGCCTAAAGTGTTTCCAATCTCTGGGACCTCTGTACCCAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp ATGGATTTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCTCCCTGCAGCTCCTCTaGGCTAAAGGTCCCGGGGAA +
Preference number: 5 (lower is better)
Translates to: MDLKIGNHTQPSWPRANPSLQLL*AKGPGE
Trigger: TTCCCCGGGACCTTTAGCCAAGAGGAGCTGCAGGGA...GGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAAATCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp TTCCTTGGCCTAAACAAAGTCCCTATTTGTCCCTTTGGGCTCTGGAGAGCAAGACAGGACAGGTCAAAATaGCCCACTGTGGTCCCATCT +
Preference number: 5 (lower is better)
Translates to: FLGLNKVPICPFGLWRARQDRSK*PTVVPS
Trigger: AGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG...TCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTTAGGCCAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp AATAAGTGGGGAGTGGGATTAATAATCGCAGGACCGAGTTGCCCTACTTCCGCTTCCCTATTTGTCCCTTaGGGCTCTGGAGAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: NKWGVGLIIAGPSCPTSASLFVP*GSGEQE
Trigger: TTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGA...AGCGGAAGTAGGGCAACTCGGTCCTGCGATTATTAATCCCACTCCCCACTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCAGAGCAGGGCATTTTGAAACAAAGTCCCTATTaGTCCCTTTGGGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: ENSLSFHPGVKASEQGILKQSPY*SLWALE
Trigger: CTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTT...CAAAATGCCCTGCTCTGAAGCCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp ATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATAATCGCAGGACCGAGTaGCCCTACTTCCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: IGNHTQPSWPRANPKELYNRRTE*PYFRSF
Trigger: GAAGGAGCGGAAGTAGGGCAACTCGGTCCTGCGATT...ATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CCAAGCCCTTTACCCTTTCAGAAAACAGCCTCTCTTTCCACCCAGGTGTCAAGGCTTCTCTCCAAAGCCTaGCCAATCACTTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: PSPLPFQKTASLSTQVSRLLSKA*PITFWK
Trigger: TTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAAG...CCTTGACACCTGGGTGGAAAGAGAGGCTGTTTTCTGAAAGGGTAAAGGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGCGAGCACAACTACGTaGCCACATTCTAGGACCAAG +
Preference number: 5 (lower is better)
Translates to: SWPRANPKELYGSRRESLASTTT*PHSRTK
Trigger: CTTGGTCCTAGAATGTGGCAACGTAGTTGTGCTCGC...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp ATGGATTTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCCTGTTTGAGGGCAAATaGCCCAGCCTGCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: MDLKIGNHTQPSWPRANPLFEGK*PSLLSS
Trigger: GGAGCTGAGCAGGCTGGGCAATTTGCCCTCAAACAG...GGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAAATCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCTCAGAGCAGGGCATTTaGGTAACCTGGCCATGGTCC +
Preference number: 5 (lower is better)
Translates to: PRANPKELYGSRRESLVFSEQGI*VTWPWS
Trigger: GGACCATGGCCAGGTTACCAAAATGCCCTGCTCTGA...GAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp AAGCTATGCTTCTGGGAATCCAGACCAAGCCCTTTACCCTTTCAGAAAACAGCCTCCCTATTTGTCCCTTaGGGCTCTGGAGAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: KLCFWESRPSPLPFQKTASLFVP*GSGEQE
Trigger: TTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGA...GGCTGTTTTCTGAAAGGGTAAAGGGCTTGGTCTGGATTCCCAGAAGCATAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp AAGAGGAGAGGAAGAGTTCCAGTTCCATCCACTGCGAGCACTACCCCATACCCAAATTCCATCCTTTCCTaGGCGAAAAATTCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: KRRGRVPVPSTASTTPYPNSILS*AKNSAQ
Trigger: CTGAGCAGAATTTTTCGCCAAGGAAAGGATGGAATT...TGGGTATGGGGTAGTGCTCGCAGTGGATGGAACTGGAACTCTTCCTCTCCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS-3UTR CAA 90 bp TCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAAGTGGTTCCATCTCCTaGTTGACACTCTCAGCACAC +
Preference number: 5 (lower is better)
Translates to: SWPRANPKELYGSRRESLSGSIS*LTLSAH
Trigger: GTGTGCTGAGAGTGTCAACAAGGAGATGGAACCACT...TAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GCTGGCTCTGAGTTTCTGGTGTCAGCATACTCACAACAAGACCAAGTGGCACATCTTCTCTCCAAAGCCTaGCCAATCACTTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: AGSEFLVSAYSQQDQVAHLLSKA*PITFWK
Trigger: TTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAAG...ATGTGCCACTTGGTCTTGTTGTGAGTATGCTGACACCAGAAACTCAGAGCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACTATATGGCCTTCTCTCCAAAGCCTaGCCAATCACTTTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: GNHTQPSWPRANPKELYGLLSKA*PITFWK
Trigger: TTTCCAGAAAGTGATTGGCAAGGCTTTGGAGAGAAG...GCCATATAGTTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp CCAAGAGCTAATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCAGTGGTTCCATCTCCTaGTTGACACTCTCAGCACAC +
Preference number: 5 (lower is better)
Translates to: PRANPKELYGSRRESLVFSGSIS*LTLSAH
Trigger: GTGTGCTGAGAGTGTCAACAAGGAGATGGAACCACT...GAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATTAGCTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp TTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAGGAACAGGACAGGTCAAAATaGCCCACTGTGGTCCCATCT +
Preference number: 5 (lower is better)
Translates to: LKIGNHTQPSWPRANPKEQDRSK*PTVVPS
Trigger: AGATGGGACCACAGTGGGCAATTTTGACCTGTCCTG...TTCCTTGGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp AATCCCAAGGAACTATATGGCTCTAGAAGAGAGTCCCTAGTTTTCCCTGACAGATCCCTATTTGTCCCTTaGGGCTCTGGAGAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: NPKELYGSRRESLVFPDRSLFVP*GSGEQE
Trigger: TTCTTGCTCTCCAGAGCCCAAAGGGACAAATAGGGA...TCTGTCAGGGAAAACTAGGGACTCTCTTCTAGAGCCATATAGTTCCTTGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp GATTCAGATCTGAAATGGTCATCTCAAGGCATCAACAGTCTCACTGAGACACAGGTCAGAAAGTTAGCATaGGAGAGCAGCAATCTTAGC +
Preference number: 5 (lower is better)
Translates to: DSDLKWSSQGINSLTETQVRKLA*ESSNLS
Trigger: GCTAAGATTGCTGCTCTCCAATGCTAACTTTCTGAC...CTGTGTCTCAGTGAGACTGTTGATGCCTTGAGATGACCATTTCAGATCTGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000250405.10
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS-3UTR CAA 90 bp ATGGATTTAAAAATTGGGAACCATACTCAGCCTTCTTGGCCAAGAGCTAATCCCAAACAAAGTCCCTATTaGTCCCTTTGGGCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: MDLKIGNHTQPSWPRANPKQSPY*SLWALE
Trigger: CTCCAGAGCCCAAAGGGACAAATAGGGACTTTGTTT...GGGATTAGCTCTTGGCCAAGAAGGCTGAGTATGGTTCCCAATTTTTAAATCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS CCA 90 bp TTCATTCATGTTCATCTCTGCTATTCCTTCTCCCTCCAGAAGGGATaGAAACCCTATTTTCTTTTCTCCAAGACCATGGTTGGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: FIHVHLCYSFSLQKG*KPYFLFSKTMVGLL
Trigger: AAGCAGACCAACCATGGTCTTGGAGAAAAGAAAATAGGGTTTCCATCCCTTCTGGAGGGAGAAGGAATAGCAGAGATGAACATGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553824.5
CDS CCA 72 bp GTCTGCCACCAGAGCCCGTGTGTCTGGGGCCGAGGCTaGGGTCGCCATCCGGGCGGCCAGCCGGGATGGCAG +
Preference number: 6 (lower is better)
Translates to: VCHQSPCVWGRG*GRHPGGQPGWQ
Trigger: CTGCCATCCCGGCTGGCCGCCCGGATGGCGACCCCAGCCTCGGCCCCAGACACACGGGCTCTGGTGGCAGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000250405.10
ENST00000553824.5
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS CAA 90 bp GCGCCGGAAGCGGGTCTCGAACTCATCTCCAGCTGCCCGCATGGCTaGGTGCAGCGGGTCAGCTGCTGGGCCCTCCCCGGGGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: APEAGLELISSCPHG*VQRVSCWALPGASS
Trigger: GGAGCTGGCCCCGGGGAGGGCCCAGCAGCTGACCCGCTGCACCAAGCCATGCGGGCAGCTGGAGATGAGTTCGAGACCCGCTTCCGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 72 bp CGTGGAGCCCTCAGCCAGTCTCCAACCCCGCCCGCCTaGCAGGTTAGGGATCTCACGGGTCAGGCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: RGALSQSPTPPA*QVRDLTGQAAA
Trigger: GGCAGCGGCCTGACCCGTGAGATCCCTAACCTGGCAGGCGGGCGGGGTTGGAGACTGGCTGAGGGCTCCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679000.1
CDS GCA 72 bp GGAAGGGCTAGGGTTGCAGCTCTGGGCCTAGGCCCCTaGCCCCAACGCTCTACCAGCTGTGTGGCCGAATCC +
Preference number: 6 (lower is better)
Translates to: GRARVAALGLGP*PQRSTSCVAES
Trigger: GGATTCGGCCACACAGCTGGTAGAGCGTTGGGGGCAGGGGCCTAGGCCCAGAGCTGCAACCCTAGCCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554635.1
CDS CCA 72 bp ATAACCTACAAAGTCTGCCACCAGAGCCCGTGTGTCTaGGGCCGAGGCTGGGGTCGCCATCCGGGCGGCCAG +
Preference number: 6 (lower is better)
Translates to: ITYKVCHQSPCV*GRGWGRHPGGQ
Trigger: CTGGCCGCCCGGATGGCGACCCCAGCCTCGGCCCCAGACACACGGGCTCTGGTGGCAGACTTTGTAGGTTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000250405.10
ENST00000553824.5
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS CCA 72 bp CCAGCCGGGATGGCAGCTCTTAAGACACAGCACTGGTaGCAAGGAGCCCCCAGCTGGGGCCTTTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: PAGMAALKTQHW*QGAPSWGLSSS
Trigger: GGAGGATGAAAGGCCCCAGCTGGGGGCTCCTTGCCACCAGTGCTGTGTCTTAAGAGCTGCCATCCCGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000250405.10
ENST00000553824.5
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 72 bp GGGTCACATGCAGCTGAGCCGCCAGATCAGAGAAGGTaGGCCGGAAGCGGGTCTCGAACTCATCTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: GSHAAEPPDQRR*AGSGSRTHLQL
Trigger: CAGCTGGAGATGAGTTCGAGACCCGCTTCCGGCGCACCTTCTCTGATCTGGCGGCTCAGCTGCATGTGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 72 bp GGGAGACTCAGCCCCGTACCTCATTCCCAACATAGCTaGCTCAGCCTCCAATCAGAGCCCCCATCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: GRLSPVPHSQHS*LSLQSEPPSSP
Trigger: GGGGGAAGATGGGGGCTCTGATTGGAGGCTGAGGCAGCTATGTTGGGAATGAGGTACGGGGCTGAGTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS GCA 72 bp ACTGTCCTCCCGGGAAACCCAAGGCCAAGGGCTTCCTaGCGACACCATCTCTATTCCCGGTTCCCCCTAGTG +
Preference number: 6 (lower is better)
Translates to: TVLPGNPRPRAS*RHHLYSRFPLV
Trigger: CACTAGGGGGAACCGGGAATAGAGATGGTGTCGGCAGGAAGCCCTTGGCCTTGGGTTTCCCGGGAGGACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554635.1
CDS CCA 72 bp TGCCTCAGCCTCCAATCAGAGCCCCCATCTTCCCCCTaGAGACCAGCTTTGCAGAAGGATGTGCAGAGCGGC +
Preference number: 6 (lower is better)
Translates to: CLSLQSEPPSSP*RPALQKDVQSG
Trigger: GCCGCTCTGCACATCCTTCTGCAAAGCTGGTCTCCAGGGGGAAGATGGGGGCTCTGATTGGAGGCTGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS TCA 72 bp AAGTTCATCGGAGACCTGGGTGAAGCGTTGTTGGGCTaGGCCTGGGGTCACATGCAGCTGAGCCGCCAGATC +
Preference number: 6 (lower is better)
Translates to: KFIGDLGEALLG*AWGHMQLSRQI
Trigger: GATCTGGCGGCTCAGCTGCATGTGACCCCAGGCTCAGCCCAACAACGCTTCACCCAGGTCTCCGATGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000556599.1
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 72 bp GAGCGGCAATTGAGAAGCTTCTTACCCAGCCCCCACTaGTGTGGATCCAGTCAGCCAGCTGCGTCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: ERQLRSFLPSPH*CGSSQPAASPG
Trigger: ACCTGGAGACGCAGCTGGCTGACTGGATCCACAGCAGTGGGGGCTGGGTAAGAAGCTTCTCAATTGCCGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS GCA 72 bp ATAACCCTTCTGCCTCAGCTTATAACCTACAAAGTCTaGCACCAGAGCCCGTGTGTCTGGGGCCGAGGCTGG +
Preference number: 6 (lower is better)
Translates to: ITLLPQLITYKV*HQSPCVWGRGW
Trigger: CCAGCCTCGGCCCCAGACACACGGGCTCTGGTGGCAGACTTTGTAGGTTATAAGCTGAGGCAGAAGGGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000250405.10
ENST00000553824.5
ENST00000554635.1
ENST00000556100.3
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS CCA 72 bp GTAGGCCACCATCCACTCCTGCACTTGTCCCACCAGTaGTTCCATCTCCTTGTTGACACTCTCAGCACACAG +
Preference number: 6 (lower is better)
Translates to: VGHHPLLHLSHQ*FHLLVDTLSTQ
Trigger: CTGTGTGCTGAGAGTGTCAACAAGGAGATGGAACCACTGGTGGGACAAGTGCAGGAGTGGATGGTGGCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000556599.1
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS CAA 72 bp CACTCCTGCACTTGTCCCACCAGTGGTTCCATCTCCTaGTTGACACTCTCAGCACACAGTGCAGCCCCAAAG +
Preference number: 6 (lower is better)
Translates to: HSCTCPTSGSIS*LTLSAHSAAPK
Trigger: CTTTGGGGCTGCACTGTGTGCTGAGAGTGTCAACAAGGAGATGGAACCACTGGTGGGACAAGTGCAGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000556599.1
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS CAA 90 bp GCCACCATCCACTCCTGCACTTGTCCCACCAGTGGTTCCATCTCCTaGTTGACACTCTCAGCACACAGTGCAGCCCCAAAGACAAAGAAG +
Preference number: 6 (lower is better)
Translates to: ATIHSCTCPTSGSIS*LTLSAHSAAPKTKK
Trigger: CTTCTTTGTCTTTGGGGCTGCACTGTGTGCTGAGAGTGTCAACAAGGAGATGGAACCACTGGTGGGACAAGTGCAGGAGTGGATGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000556599.1
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 72 bp TGGTTCCATCTCCTTGTTGACACTCTCAGCACACAGTaGAGCCCCAAAGACAAAGAAGGCTACAAGGCGGCC +
Preference number: 6 (lower is better)
Translates to: WFHLLVDTLSTQ*SPKDKEGYKAA
Trigger: GGCCGCCTTGTAGCCTTCTTTGTCTTTGGGGCTGCACTGTGTGCTGAGAGTGTCAACAAGGAGATGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000250405.10
ENST00000556100.3
ENST00000556599.1
ENST00000557236.6
ENST00000557579.2
ENST00000678311.1
ENST00000679000.1
ENST00000679219.1
CDS GCA 72 bp AATCAGAGCCCCCATCTTCCCCCTGGAGACCAGCTTTaGAGAAGGATGTGCAGAGCGGCAATTGAGAAGCTT +
Preference number: 6 (lower is better)
Translates to: NQSPHLPPGDQL*RRMCRAAIEKL
Trigger: AAGCTTCTCAATTGCCGCTCTGCACATCCTTCTGCAAAGCTGGTCTCCAGGGGGAAGATGGGGGCTCTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557236.6
CDS CAA 90 bp TCCAGAAGGGATGGAAACCCTATTTTCTTTTCTCCAAGACCATGGTaGGTCTGCTTCCCTCACTCGGGCTCCTTGACAGTCTTCATGCCC +
Preference number: 6 (lower is better)
Translates to: SRRDGNPIFFSPRPW*VCFPHSGSLTVFMP
Trigger: GGGCATGAAGACTGTCAAGGAGCCCGAGTGAGGGAAGCAGACCAACCATGGTCTTGGAGAAAAGAAAATAGGGTTTCCATCCCTTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553824.5
CDS CAA 72 bp GATGGAAACCCTATTTTCTTTTCTCCAAGACCATGGTaGGTCTGCTTCCCTCACTCGGGCTCCTTGACAGTC +
Preference number: 6 (lower is better)
Translates to: DGNPIFFSPRPW*VCFPHSGSLTV
Trigger: GACTGTCAAGGAGCCCGAGTGAGGGAAGCAGACCAACCATGGTCTTGGAGAAAAGAAAATAGGGTTTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553824.5
CDS GCA 72 bp AACCCTATTTTCTTTTCTCCAAGACCATGGTTGGTCTaGTTCCCTCACTCGGGCTCCTTGACAGTCTTCATG +
Preference number: 6 (lower is better)
Translates to: NPIFFSPRPWLV*FPHSGSLTVFM
Trigger: CATGAAGACTGTCAAGGAGCCCGAGTGAGGGAAGCAGACCAACCATGGTCTTGGAGAAAAGAAAATAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553824.5