RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCL2L13 (Homo sapiens)

Ensembl gene IDs: ENSG00000099968

Ensembl transcript IDs: ENST00000317582.10, ENST00000337612.9, ENST00000355028.4, ENST00000399777.1, ENST00000399781.5, ENST00000399782.5, ENST00000418951.6, ENST00000464649.1, ENST00000479296.1, ENST00000485631.1, ENST00000493680.5, ENST00000498133.5, ENST00000538149.5, ENST00000543133.5, ENST00000611738.4, ENST00000616863.4, ENST00000618481.4

Found 1702 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTTGGAGACTCTGGGGGACTGACTTGT +
Preference number: 1 (lower is better)
Translates to: CQLWLADSDTGKLSD*QEVVTVGDSGGLTC
Trigger: ACAAGTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR CCA 90 bp ACGGGACATTTGGCAATGTCTAGAGACATTTTCGTTTGTCATCTCTaGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACAC +
Preference number: 1 (lower is better)
Translates to: TGHLAMSRDIFVCHL*EGVPLASSGWSPPH
Trigger: GTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTGCCAAATGTCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 90 bp TCTCAGACTGCCAGGAAGTGGTCACAGTTGGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGCTGGGCAGGATGTAAATGTCATTGC +
Preference number: 1 (lower is better)
Translates to: SQTARKWSQLETLGD*LVQSCRWAGCKCHC
Trigger: GCAATGACATTTACATCCTGCCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR TCA 90 bp CCTCCTTTCAGCAGCTCAGAGATGAACCTGGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGT +
Preference number: 1 (lower is better)
Translates to: PPFSSSEMNLASIGA*MRSANGCEDPELAS
Trigger: ACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGAAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 90 bp CCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCTAGTGACACTGGCAGGCTTTCTGTG +
Preference number: 1 (lower is better)
Translates to: PLLSKLFTSSGSIAI*CQDSGPSDTGRLSV
Trigger: CACAGAAAGCCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR TCA 90 bp TGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCA +
Preference number: 1 (lower is better)
Translates to: CPTSSPNMPNMPLPC*AEVPNYPRVFHKCP
Trigger: TGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 90 bp CGGTCCTGGAGGGGGTGCTTTACCCCTAAGATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCC +
Preference number: 1 (lower is better)
Translates to: RSWRGCFTPKILNLA*AEALGIYSQMNVNA
Trigger: GGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 90 bp TTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGTGACACTGGCAGGCTTTCTGTGTGC +
Preference number: 1 (lower is better)
Translates to: LLSKLFTSSGSIAIC*QDSGPSDTGRLSVC
Trigger: GCACACAGAAAGCCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR GCA 90 bp ACAGCAGCCTCTTCCATGCCCTCGGGCACCTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAGGAGTTGTTCTCACTCTTCTCTCCA +
Preference number: 1 (lower is better)
Translates to: TAASSMPSGTSSFST*TMSELEELFSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR GCA 90 bp AATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCCCCAATTATCCCAGAGTGTTCCACA +
Preference number: 1 (lower is better)
Translates to: NVNAPPQALTCLTCH*HVEQKSPIIPECST
Trigger: TGTGGAACACTCTGGGATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 90 bp CAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATaGCACTGCCATGTTGAGCAGAAGTCCCCAATTATCCCAGAGTGT +
Preference number: 1 (lower is better)
Translates to: QMNVNAPPQALTCLT*HCHVEQKSPIIPEC
Trigger: ACACTCTGGGATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 90 bp CTCTGCCGAATAGTCCTCCAGGTATGTCACGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACCACGTCTTGTCAATTCCAAAAGCAT +
Preference number: 1 (lower is better)
Translates to: LCRIVLQVCHAKLQQ*AQRFLTTSCQFQKH
Trigger: ATGCTTTTGGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATACCTGGAGGACTATTCGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR TCA 90 bp GTCATTGCTATCTTCTGCAGTGATTCCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGTGCCCCAGCCACCTTGCTGAATGAT +
Preference number: 1 (lower is better)
Translates to: VIAIFCSDSRVFLLL*LKTKHSAPATLLND
Trigger: ATCATTCAGCAAGGTGGCTGGGGCACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATACCCTGGAATCACTGCAGAAGATAGCAATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR GCA 90 bp CAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGTAGC +
Preference number: 1 (lower is better)
Translates to: QCGDHLLHFSRFSCC*FHLFFIKFYKQRCS
Trigger: GCTACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR TCA 90 bp CTTACTGTCATATTATTGAGGGAATCAGCGCAAAGCCTGAGGAAATaGACAGTAGCTGTGGGTCAAAGCCATGTCTCCAGGTTCACGGCT +
Preference number: 1 (lower is better)
Translates to: LTVILLRESAQSLRK*TVAVGQSHVSRFTA
Trigger: AGCCGTGAACCTGGAGACATGGCTTTGACCCACAGCTACTGTTCATTTCCTCAGGCTTTGCGCTGATTCCCTCAATAATATGACAGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 90 bp TCCAGGTATGTCACGCCAAACTGCAGCAGTGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCCAAAAGCATTTGTCGTAGCAAAACC +
Preference number: 1 (lower is better)
Translates to: SRYVTPNCSSALKGS*PRLVNSKSICRSKT
Trigger: GGTTTTGCTACGACAAATGCTTTTGGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATACCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR GCA 90 bp TTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTaGTGCTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGT +
Preference number: 1 (lower is better)
Translates to: FQCGDHLLHFSRFSC*CFHLFFIKFYKQRC
Trigger: ACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR CCA 90 bp TGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTaGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAG +
Preference number: 1 (lower is better)
Translates to: CVHISKIPKGSIFTR*SCRKLRGLDRLSPE
Trigger: CTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATG +
Preference number: 1 (lower is better)
Translates to: EMQVRRGIKNASRGR*VNQKVNSCISSSRM
Trigger: CATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 90 bp GAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATC +
Preference number: 1 (lower is better)
Translates to: EVPNYPRVFHKCPDS*WRFKFQPIQLQPYI
Trigger: GATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 90 bp GTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTT +
Preference number: 1 (lower is better)
Translates to: VPNYPRVFHKCPDSC*RFKFQPIQLQPYIL
Trigger: AAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 90 bp ATGTCCACATCTCATACCTTTCAGGAGAAAGGCAAGGAGACTACTTaGCTTACTGTCATATTATTGAGGGAATCAGCGCAAAGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: MSTSHTFQEKGKETT*LTVILLRESAQSLR
Trigger: CCTCAGGCTTTGCGCTGATTCCCTCAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCTTTCTCCTGAAAGGTATGAGATGTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 90 bp ATGATGATCATGAGAGTCCCCTTAAGGCACACCGCAGGTACTGACTaGTTTCTGTGGGCCCAGAATTATCACTTTAATACAGAGAGGATA +
Preference number: 1 (lower is better)
Translates to: MMIMRVPLRHTAGTD*FLWAQNYHFNTERI
Trigger: TATCCTCTCTGTATTAAAGTGATAATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGCCTTAAGGGGACTCTCATGATCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 90 bp TGCACCAGAGAAGAGGAAACATTATTCTGGTATCCAGTATGTCGCTaGGATGTTAAACGAGATAATGCTTGTGTGGGAATTTGGGCAGAA +
Preference number: 1 (lower is better)
Translates to: CTREEETLFWYPVCR*DVKRDNACVGIWAE
Trigger: TTCTGCCCAAATTCCCACACAAGCATTATCTCGTTTAACATCTCAGCGACATACTGGATACCAGAATAATGTTTCCTCTTCTCTGGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 90 bp AGCCAATGGAAAACACTATCTAGTTCCATTACCGTGAAATACAACTaGCCAAATCACTGTGGAGGAATGTCTAACAGGTGGGAAAATAAA +
Preference number: 1 (lower is better)
Translates to: SQWKTLSSSITVKYN*PNHCGGMSNRWENK
Trigger: TTTATTTTCCCACCTGTTAGACATTCCTCCACAGTGATTTGGCCAGTTGTATTTCACGGTAATGGAACTAGATAGTGTTTTCCATTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 90 bp CAGCCAGAGGAAAGAAAATTATGCCGATGCTCAACTAGCATATACTaGTTAGGACTATTTTGGTTTATTACCCTGGCATTGAAGAATTCA +
Preference number: 1 (lower is better)
Translates to: QPEERKLCRCSTSIY*LGLFWFITLALKNS
Trigger: TGAATTCTTCAATGCCAGGGTAATAAACCAAAATAGTCCTAATCAGTATATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTCTGGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 90 bp GACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACGGGCTTCTTCTCGCTGGCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: DSGMGFISPAGDSLD*PSDGGTGFFSLAGD
Trigger: GTCCCCTGCCAGCGAGAAGAAGCCCGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 2 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR CAA 90 bp GCCAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGAC +
Preference number: 2 (lower is better)
Translates to: ARMATAAAPPNSSID*PSDSGMGFISPAGD
Trigger: GTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTATGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 2 (lower is better)
Translates to: LRGLDRLSPEQALARGILWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 2 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 2 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 2 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 2 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: LRGLDRLSPEQALARGILGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: KLRGLDRLSPEQALARGISCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAAAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCATCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAASAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 2 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGACAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGATTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: QGCCHILLTQELTKSYQRFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGATACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 2 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 2 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 2 (lower is better)
Translates to: GGPWDLQSDECECPTSSPETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 2 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTAGCCACCTTGCTGAATaGTGTACTCTGCCGAATAGT +
Preference number: 2 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSHLAE*CTLPNS
Trigger: ACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR GCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGAGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCACAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 2 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 2 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GGPWDLQSDECECPTSSPGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCATCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 2 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLEPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGACCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 2 (lower is better)
Translates to: PHPVNSGADQELPEKANGPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGACCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 2 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 2 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 2 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATATCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 2 (lower is better)
Translates to: VEECLTGGKIKQQVAASISLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: AQPMGVRIQNWQVLILELAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGACCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 2 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR GCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 2 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: STRLSSLAFISFSLSSVSSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: AQPMGVRIQNWQVLILELFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCACGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: CHILLTQELTKSYQRKPMLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 2 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 2 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCATCTTATTCCAGCCGCTaGCATGAACTGTGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSSYSSR*HELWSP
Trigger: TGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGA...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR CAA 90 bp CTTGGCTATTCAGGACCTGAGGCAGGATCACTTGAGCCCAGGAGTTaGAGACCGAAGCCTGCCATGATAGTGCCAGCAATTAGACACTGC +
Preference number: 2 (lower is better)
Translates to: LGYSGPEAGSLEPRS*RPKPAMIVPAIRHC
Trigger: GCAGTGTCTAATTGCTGGCACTATCATGGCAGGCTTCGGTCTCAAACTCCTGGGCTCAAGTGATCCTGCCTCAGGTCCTGAATAGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
3UTR-3UTR TCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 2 (lower is better)
Translates to: CHILLTQELTKSYQRKPMAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 2 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 2 (lower is better)
Translates to: DLQSDECECPTSSPNMPNWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACC +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGAKLQQ*AQRFLT
Trigger: GGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR CCA 90 bp GCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTTCACCTCTTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 2 (lower is better)
Translates to: AGTTSSTSVGSVVAAFTSSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...AGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGATCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 2 (lower is better)
Translates to: PHPVNSGADQELPEKANGSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 2 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACTGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 90 bp AGACTGCCAGGAAGTGGTCACAGTTGGAGACTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGGCAGGATGTAAATGTCATTGCTATC +
Preference number: 2 (lower is better)
Translates to: RLPGSGHSWRLWGTD*SRVVAGQDVNVIAI
Trigger: GATAGCAATGACATTTACATCCTGCCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR CAA 90 bp TCCTGCCTTGACACAAGACACATGTGTCTCTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCCTTCATGTG +
Preference number: 2 (lower is better)
Translates to: SCLDTRHMCLSSQSY*QLHSQVGTPGLLHV
Trigger: CACATGAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAGACACATGTGTCTTGTGTCAAGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTATGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: LRGLDRLSPEQALARGILWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 2 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 2 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: STRLSSLAFISFSLSSVSGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAGGCTCTCTTCCCTTGCGTTTATCTCCTTCTCACTCAGCAGCGTTTCTGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: STRLSSLAFISFSLSSVSGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...AGAAACGCTGCTGAGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: AQPMGVRIQNWQVLILELGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTTCACCTCTTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: AGTTSSTSVGSVVAAFTSFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...AGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGACCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGACCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGAGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 2 (lower is better)
Translates to: LSFSLLQDPLQSAARTQGGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...GCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 2 (lower is better)
Translates to: SDECECPTSSPNMPNMPLGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 2 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 2 (lower is better)
Translates to: TSSGSIAICCQDSGPSDTQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...AGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 2 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGATCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 2 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: VNAPPQALTCLTCHCHVECPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: AQPMGVRIQNWQVLILELSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 2 (lower is better)
Translates to: VNAPPQALTCLTCHCHVECYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 2 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCATCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGG +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITASIGA*MRSANG
Trigger: CCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGC...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 2 (lower is better)
Translates to: LSVCQLWLADSDTGKLSDGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...GTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAARFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGATCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 2 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 2 (lower is better)
Translates to: VNAPPQALTCLTCHCHVESDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 2 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGACTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 2 (lower is better)
Translates to: QGCCHILLTQELTKSYQRLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 2 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 2 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGGTATAAGTTGGAGGTaGAAGGAATGGCCTCCTACT +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNGISWR*KEWPPT
Trigger: AGTAGGAGGCCATTCCTTCCACCTCCAACTTATACC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTTTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCT +
Preference number: 2 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGLEGIS*RWKEWP
Trigger: AGGCCATTCCTTCCACCTCCAACTTATACCCTCTAA...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 2 (lower is better)
Translates to: IEKDEILRGLRAKKSVAESLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCREQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATAGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: VEECLTGGKIKQQVAASIEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITSAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp CAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGCCAGGAAGTGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGT +
Preference number: 2 (lower is better)
Translates to: QLWLADSDTGKLSDCQEVVFLLL*LKTKHS
Trigger: ACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATAC...CACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR GCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGATCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 2 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGAAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 2 (lower is better)
Translates to: PHPVNSGADQELPEKANGRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 2 (lower is better)
Translates to: QCLETFSFVISGRGCHWHSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACATTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: CHILLTQELTKSYQRKPMCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 90 bp TCGCTAAAGCAGTGGGTCTCAATAGGGGATGTTCACACGGGACATTaGGCAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SLKQWVSIGDVHTGH*AMSRDIFVCHLWEG
Trigger: CCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTGCCAAATGTCCCGTGTGAACATCCCCTATTGAGACCCACTGCTTTAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 90 bp TCACGCCAAACTGCAGCAGTGCGCTCAAAGGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTTGTCGTAGCAAAACCAGAGGCACCA +
Preference number: 2 (lower is better)
Translates to: SRQTAAVRSKVLDHV*SIPKAFVVAKPEAP
Trigger: TGGTGCCTCTGGTTTTGCTACGACAAATGCTTTTGGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGCGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 2 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 2 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: LQLRCCLSFSLLQDPLQSSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...AGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCAACGGAGCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 2 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 2 (lower is better)
Translates to: IEKDEILRGLRAKKSVAEWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCATTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: QCLETFSFVISGRGCHWHLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: CHILLTQELTKSYQRKPMLTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 2 (lower is better)
Translates to: QCLETFSFVISGRGCHWHSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGATAACGCACCAGTTTaGTCTTCACCTATGCAAACA +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNDNAPV*SSPMQT
Trigger: TGTTTGCATAGGTGAAGAGCAAACTGGTGCGTTATC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: SDECECPTSSPNMPNMPLVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCATTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 90 bp GGCACCTCTTCTTTCTCCACGTGCACAATGTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTC +
Preference number: 2 (lower is better)
Translates to: GTSSFSTCTMSELEE*FSLFSPAPLLSKLF
Trigger: GAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGAGGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 2 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 2 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 2 (lower is better)
Translates to: WVNQKVNSCISSSRMFSREQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACAGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 2 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGTTCCAGCCGCTGGCATaGACTGTGGTCTCCAGTGTA +
Preference number: 2 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQFQPLA*TVVSSV
Trigger: TACACTGGAGACCACAGTTCATGCCAGCGGCTGGAA...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR-3UTR GCA 90 bp CTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 2 (lower is better)
Translates to: LSVCQLWLADSDTGKLSDVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...GTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TTCTCCACGTGCACAATGTCAGAATTAGAGGAGTTGTTCTCACTCTTCTCTCCATCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: FSTCTMSELEELFSLFSPSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 2 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLESLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 2 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 2 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: IEKDEILRGLRAKKSVAERASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCACTAAGTTCTCTCAGCTaGGAATTTCTATCCCAATTC +
Preference number: 2 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPLSSLS*EFLSQF
Trigger: GAATTGGGATAGAAATTCCCAGCTGAGAGAACTTAG...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGGAATGTCTAACAGGTaGGAAAATAAAGCAGCAAGT +
Preference number: 2 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNGMSNR*ENKAAS
Trigger: ACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp AGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTTTCACTTTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 2 (lower is better)
Translates to: RSCSHSSLQLRCCLSFSLCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: CHILLTQELTKSYQRKPMWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATAATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 2 (lower is better)
Translates to: VEECLTGGKIKQQVAASIILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACAGCCACCTTGCTGAATaGTGTACTCTGCCGAATAGT +
Preference number: 2 (lower is better)
Translates to: DLQSDECECPTSSPNMPNSHLAE*CTLPNS
Trigger: ACTATTCGGCAGAGTACATCATTCAGCAAGGTGGCT...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR GCA 90 bp ATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 2 (lower is better)
Translates to: MNVNAPPQALTCLTCHCHVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCTCTTCTGAAAAGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 2 (lower is better)
Translates to: SLLKSLLFLSQSQGYPDGSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...GCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCTTTTCAGAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 2 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACTAACATGCCTAACATaGCACTGCCATGTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: VEECLTGGKIKQQVAASILTCLT*HCHVEQ
Trigger: CTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAG...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACCTGAATGATGTACTCTaGCGAATAGTCCTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYLNDVL*RIVLQV
Trigger: TACCTGGAGGACTATTCGGCAGAGTACATCATTCAG...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR CCA 90 bp GCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 2 (lower is better)
Translates to: AGGSNSSQYNSNLTSFCLSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...AAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp CAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: QSVPQMSRQLLEVQIPANWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...ATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp TGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: CPDSCWRFKFQPIQLQPYWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...GTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 2 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 2 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 2 (lower is better)
Translates to: AQPMGVRIQNWQVLILELSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATAAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 2 (lower is better)
Translates to: VEECLTGGKIKQQVAASIKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 2 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp TTCTCCACGTGCACAATGTCAGAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGTCCAGAGTTGTCGCTaGGCAGGATGTAAATGTCAT +
Preference number: 2 (lower is better)
Translates to: FSTCTMSELEELFSLFSPVQSCR*AGCKCH
Trigger: ATGACATTTACATCCTGCCCAGCGACAACTCTGGAC...TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGACATTGTGCACGTGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCACACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQCPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGTGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 2 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 90 bp AATGTCCACATCTCATACCTTTCAGGAGAAAGGCAAGGAGACTACTaGCCTTACTGTCATATTATTGAGGGAATCAGCGCAAAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: NVHISYLSGERQGDY*PYCHIIEGISAKPE
Trigger: CTCAGGCTTTGCGCTGATTCCCTCAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCTTTCTCCTGAAAGGTATGAGATGTGGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp AGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTGTCATTGCTATCTTCTaGAGTGATTCCAGGGTATTC +
Preference number: 2 (lower is better)
Translates to: RQLLEVQIPANTTPTLHPVIAIF*SDSRVF
Trigger: GAATACCCTGGAATCACTGCAGAAGATAGCAATGAC...AGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AGTTGTTGCTGCTTTCACCTCTTCTTCATCAAGTTCTACAAACAGAGATGTAGCGGTAAGCTCTCAGACTaGCAGGAAGTGGTCACAGTT +
Preference number: 2 (lower is better)
Translates to: SCCCFHLFFIKFYKQRCSGKLSD*QEVVTV
Trigger: AACTGTGACCACTTCCTGGCAGTCTGAGAGCTTACC...GCTACATCTCTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: LCVHISKIPKGSIFTRWSFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...GCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 2 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAG +
Preference number: 2 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFKCPDS*WRFKFQ
Trigger: CTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 2 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 2 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 2 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGG +
Preference number: 2 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTLARVT*SCTHKW
Trigger: CCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAG...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGAGAGGAAAGAAAATTATaGCGATGCTCAACTAGCATA +
Preference number: 2 (lower is better)
Translates to: PHPVNSGADQELPEKANGEERKL*RCSTSI
Trigger: TATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTC...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CCA 90 bp TCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCACCGGAATGTCTAACAGGTaGGAAAATAAAGCAGCAAGT +
Preference number: 2 (lower is better)
Translates to: SVSNQIAYKAVLMGMITTGMSNR*ENKAAS
Trigger: ACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCC...GGTGGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCGAGGAAAGAAAATTATaGCGATGCTCAACTAGCATA +
Preference number: 2 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITEERKL*RCSTSI
Trigger: TATGCTAGTTGAGCATCGGCATAATTTTCTTTCCTC...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGTATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 2 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR CCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: IEKDEILRGLRAKKSVAECPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 2 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGGGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 2 (lower is better)
Translates to: VHISKIPKGSIFTRWSCRAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...CCTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGAAGGAAGAACAGGGATaGTGCCACATCCTGTTAACT +
Preference number: 2 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRKEEQG*CHILLT
Trigger: AGTTAACAGGATGTGGCAGCATCCCTGTTCTTCCTT...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp GTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAAGGTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: VNQKVNSCISSSRMFSRRWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...CCTTCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR GCA 90 bp ATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGTAGCTGAGTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 2 (lower is better)
Translates to: IEKDEILRGLRAKKSVAESLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...CTCAGCTACTGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR TCA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCAGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 2 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR TCA 90 bp TGGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCATCTAGAATGTTCTCTAGAGCTCATCGAGAAAGATaGAATTCTAAGGGGATTAAG +
Preference number: 2 (lower is better)
Translates to: WVNQKVNSCISSSRMFSRAHRER*NSKGIK
Trigger: CTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGC...TCTAGAGAACATTCTAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR GCA 90 bp CTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACTCTTCTTTCTCCACGTaGACAATGTCAGAATTAGAG +
Preference number: 2 (lower is better)
Translates to: LKHRTKTRYRIKLERHTNSSFST*TMSELE
Trigger: CTCTAATTCTGACATTGTGCACGTGGAGAAAGAAGA...GTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 3 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 3 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 3 (lower is better)
Translates to: LRGLDRLSPEQALARGILGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR TCA 72 bp CAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACGGGCGAGCACCCTCAC +
Preference number: 3 (lower is better)
Translates to: QEPGGEEEQCSP*EAAESTGEHPH
Trigger: GTGAGGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 72 bp GGAAGCAAGGGAGCTGGGGCTTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAGACCACAGAAGCCACA +
Preference number: 3 (lower is better)
Translates to: GSKGAGASGSAS*SSRAGKTTEAT
Trigger: TGTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCAGCTCCCTTGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 3 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAAGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCTTGAGCCCAGGAGTTaGAGACCGAAGCCTGCCATG +
Preference number: 3 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTLEPRS*RPKPAM
Trigger: CATGGCAGGCTTCGGTCTCAAACTCCTGGGCTCAAG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
3UTR-3UTR CAA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGACTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 3 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTTCACCTCTCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 3 (lower is better)
Translates to: AGTTSSTSVGSVVAAFTSLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...AGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 3 (lower is better)
Translates to: KLRGLDRLSPEQALARGIQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 72 bp CTCAGACTGCCAGGAAGTGGTCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGAGTTGTCGCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: LRLPGSGHSWRL*GTDLSRVVAGQ
Trigger: CTGCCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 3 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CAGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 3 (lower is better)
Translates to: QKSPIIPECSTNVQTAAGGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...TCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACG +
Preference number: 3 (lower is better)
Translates to: AQPMGVRIQNWQVLILELGDSLD*PSDGGT
Trigger: CGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCC...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 3 (lower is better)
Translates to: LRGLDRLSPEQALARGILNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 3 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 72 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCACTTCAGTAGGTTCAGT +
Preference number: 3 (lower is better)
Translates to: LLLTQQRFCGFQ*GDHLLHFSRFS
Trigger: ACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR CCA 72 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTaGCATCTAGTGGGTGGAGCCCACCACACACAGGAC +
Preference number: 3 (lower is better)
Translates to: TFSFVISGRGCH*HLVGGAHHTQD
Trigger: GTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 3 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 3 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR GCA 72 bp GCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCCCCAATTATCCCAGAG +
Preference number: 3 (lower is better)
Translates to: APPQALTCLTCH*HVEQKSPIIPE
Trigger: CTCTGGGATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR TCA 72 bp AGCAGCTCAGAGATGAACCTGGCTTCGATTGGTGCTTaGATGCGCTCAGCCAATGGGTGTGAGGATCCAGAA +
Preference number: 3 (lower is better)
Translates to: SSSEMNLASIGA*MRSANGCEDPE
Trigger: TTCTGGATCCTCACACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 72 bp ACACAAGACACATGTGTCTCTCTAGCCAGAGTTACTTaGAGTTGCACTCACAAGTGGGGACCCCAGGTCTCC +
Preference number: 3 (lower is better)
Translates to: TQDTCVSLARVT*SCTHKWGPQVS
Trigger: GGAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAGACACATGTGTCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 72 bp TTGGCAATGTCTAGAGACATTTTCGTTTGTCATCTCTaGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGC +
Preference number: 3 (lower is better)
Translates to: LAMSRDIFVCHL*EGVPLASSGWS
Trigger: GCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGACATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 3 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGAGTGCCCCAGCCACCTaGCTGAATGATGTACTCTGC +
Preference number: 3 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLESAPAT*LNDVLC
Trigger: GCAGAGTACATCATTCAGCAAGGTGGCTGGGGCACT...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR-3UTR CAA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCCTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 3 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 3 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GATTCTCAATTTAGCATGAGCGGAGGCCCTTGGGATTTACAGTCAGATGAATGTTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 3 (lower is better)
Translates to: DSQFSMSGGPWDLQSDECFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...ACATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCCAGAGTTACTTGCAGTaGCACTCACAAGTGGGGACC +
Preference number: 3 (lower is better)
Translates to: AQPMGVRIQNWQVLILELQSYLQ*HSQVGT
Trigger: GGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTG...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp ATCTTCTGCAGTGATTCCAGGGTATTCCTCCTCCTCTaGCTCAAGACTAAACACAGTGCCCCAGCCACCTTG +
Preference number: 3 (lower is better)
Translates to: IFCSDSRVFLLL*LKTKHSAPATL
Trigger: CAAGGTGGCTGGGGCACTGTGTTTAGTCTTGAGTCAGAGGAGGAGGAATACCCTGGAATCACTGCAGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR TCA 72 bp ACCAGAGGCACCAAAATCTTATTCCAGCCGCTGGCATaGACTGTGGTCTCCAGTGTACATTCCCGAAATGCC +
Preference number: 3 (lower is better)
Translates to: TRGTKILFQPLA*TVVSSVHSRNA
Trigger: GGCATTTCGGGAATGTACACTGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGATTTTGGTGCCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR GCA 72 bp TCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCTAGTGACACTGGCAGG +
Preference number: 3 (lower is better)
Translates to: SKLFTSSGSIAI*CQDSGPSDTGR
Trigger: CCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR GCA 72 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATaGCACTGCCATGTTGAGCAGAAGTCCCCAATTATC +
Preference number: 3 (lower is better)
Translates to: VNAPPQALTCLT*HCHVEQKSPII
Trigger: GATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 72 bp TCCTTCACCTTAGACTTAGAGGGTATAAGTTGGAGGTaGAAGGAATGGCCTCCTACTATCAGCTCCTCCCCC +
Preference number: 3 (lower is better)
Translates to: SFTLDLEGISWR*KEWPPTISSSP
Trigger: GGGGGAGGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCAACTTATACCCTCTAAGTCTAAGGTGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp TGGGACACTAAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACTCTGGGGGACTGACTaGTCCAGAGTTGTCGCTGGG +
Preference number: 3 (lower is better)
Translates to: WDTKTQNKDTLQDKAGKTLWGTD*SRVVAG
Trigger: CCCAGCGACAACTCTGGACAAGTCAGTCCCCCAGAG...TGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTTAGTGTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGACTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: PHPVNSGADQELPEKANGLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: QCLETFSFVISGRGCHWHLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp TGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTTTCTTCAGGAAGTGCCTCTaGCAGCTCCCGCGCTGGCAA +
Preference number: 3 (lower is better)
Translates to: WRFKFQPIQLQPYILLSFFRKCL*QLPRWQ
Trigger: TTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGAA...GAAAGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 3 (lower is better)
Translates to: CHILLTQELTKSYQRKPMQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCACATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 3 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp TCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTATCCCAGAGTGTTCCAC +
Preference number: 3 (lower is better)
Translates to: SSPNMPNMPLPC*AEVPNYPRVFH
Trigger: GTGGAACACTCTGGGATAATTGGGGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR GCA 72 bp ATAGTCCTCCAGGTATGTCACGCCAAACTGCAGCAGTaGGCTCAAAGGTTCTTGACCACGTCTTGTCAATTC +
Preference number: 3 (lower is better)
Translates to: IVLQVCHAKLQQ*AQRFLTTSCQF
Trigger: GAATTGACAAGACGTGGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATACCTGGAGGACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR CCA 72 bp GTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAACAGTTGCATTTCTTCA +
Preference number: 3 (lower is better)
Translates to: VRRGIKNASRGR*VNQKVNSCISS
Trigger: TGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp GCTCAGCCAATGGGTGTGAGGATCCAGAACTGGCAAGTGTTAATACTGGAACTCTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 3 (lower is better)
Translates to: AQPMGVRIQNWQVLILELSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...GAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp GAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTTGCATTTCTTCATCTA +
Preference number: 3 (lower is better)
Translates to: EGVSRMPRGGDG*TRRSTVAFLHL
Trigger: TAGATGAAGAAATGCAACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp GTCACGCCAAACTGCAGCAGTGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCCAAAAGCATTTGTCGT +
Preference number: 3 (lower is better)
Translates to: VTPNCSSALKGS*PRLVNSKSICR
Trigger: ACGACAAATGCTTTTGGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGCACTGCTGCAGTTTGGCGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR-3UTR CAA 90 bp GTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: VPQMSRQLLEVQIPANTTLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...AGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GTGCAGAGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 3 (lower is better)
Translates to: VQSLLIEKDEILRGLRAKNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...CTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 3 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATG +
Preference number: 3 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNNSSID*PSDSGM
Trigger: CATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTT...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 3 (lower is better)
Translates to: DLQSDECECPTSSPNMPNHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 3 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp ATCATGATAGTAGGCTATAACTCAAGTTTCAATGCCACGATGGTCGTGCTTTCTTCCCAGCCTGTGCTCTaGGCTATTCAGGACCTGAGG +
Preference number: 3 (lower is better)
Translates to: IMIVGYNSSFNATMVVLSSQPVL*AIQDLR
Trigger: CCTCAGGTCCTGAATAGCCAAGAGCACAGGCTGGGA...AGAAAGCACGACCATCGTGGCATTGAAACTTGAGTTATAGCCTACTATCATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
3UTR-3UTR CAA 90 bp AGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: SQMNVNAPPQALTCLTCHSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...GTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp AGAAGTCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: RSPQLSQSVPQMSRQLLESELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...CTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATTCAGAATTAGAGGAGTaGTTCTCACTCTTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: QCLETFSFVISGRGCHWHSELEE*FSLFSP
Trigger: TGGAGAGAAGAGTGAGAACAACTCCTCTAATTCTGA...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 3 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp AGGGGGTGCTTTACCCCTAAGATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATTTACAGTCAGATGAAT +
Preference number: 3 (lower is better)
Translates to: RGCFTPKILNLA*AEALGIYSQMN
Trigger: ATTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAATCTTAGGGGTAAAGCACCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 72 bp TATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCAATACAACTCCAACCT +
Preference number: 3 (lower is better)
Translates to: YPRVFHKCPDSC*RFKFQPIQLQP
Trigger: AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp TGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGCTGCAGCTTCTTCAGGATCCATaGCAATCTGCTGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: CTYFEDSQRQHFYKVELQLLQDP*QSAART
Trigger: AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAG...CTGCAGCTCCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR-3UTR CAA 90 bp CTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACCACATTTCTTCTCTAGCCAGAGTTACTaGCAGTTGCACTCACAAGTG +
Preference number: 3 (lower is better)
Translates to: LTGGKIKQQVAASIPHFFSSQSY*QLHSQV
Trigger: CACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGA...GAAGAAATGTGGTATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp TTTCTCTGTGTACATATTTCGAAGATTCCCAAAGGCAGCATTTTTACAAGGTGGAGTGCCCCAGCCACCTaGCTGAATGATGTACTCTGC +
Preference number: 3 (lower is better)
Translates to: FLCVHISKIPKGSIFTRWSAPAT*LNDVLC
Trigger: GCAGAGTACATCATTCAGCAAGGTGGCTGGGGCACT...CCACCTTGTAAAAATGCTGCCTTTGGGAATCTTCGAAATATGTACACAGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
3UTR GCA 72 bp GACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATCAAGTTCTACAAACAG +
Preference number: 3 (lower is better)
Translates to: DHLLHFSRFSCC*FHLFFIKFYKQ
Trigger: CTGTTTGTAGAACTTGATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR CCA 72 bp AATCTTTCCTTCACCTTAGACTTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCTCCTACTATCAGCTCC +
Preference number: 3 (lower is better)
Translates to: NLSFTLDLEGIS*RWKEWPPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCAACTTATACCCTCTAAGTCTAAGGTGAAGGAAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp AGCCTGCTCATCGAGAAAGATGAAATTCTAAGGGGATTAAGAGCTAAGAAGTCACAAGGCTCTCTTCCCTaGCGTTTATCTCCTTCTCAC +
Preference number: 3 (lower is better)
Translates to: SLLIEKDEILRGLRAKKSQGSLP*RLSPSH
Trigger: GTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTTG...TGACTTCTTAGCTCTTAATCCCCTTAGAATTTCATCTTTCTCGATGAGCAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
3UTR GCA 72 bp AATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTaGTGGAGGTTCAAATTCCAGCCAATACAACTCCAA +
Preference number: 3 (lower is better)
Translates to: NYPRVFHKCPDS*WRFKFQPIQLQ
Trigger: TTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 72 bp GAATGCGCTCAGCCAATGGGTGTGAGGATCCAGAACTaGCAAGTGTTAATACTGGAACTCATAGGATTTATT +
Preference number: 3 (lower is better)
Translates to: ECAQPMGVRIQN*QVLILELIGFI
Trigger: AATAAATCCTATGAGTTCCAGTATTAACACTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAGCGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp AAAACACAGAACAAAGACACGCTACAGGATAAAGCTGGAAAGACACACAAACATCATGCCACTGCCATGTaGAGCAGAAGTCCCCAATTA +
Preference number: 3 (lower is better)
Translates to: KTQNKDTLQDKAGKTHKHHATAM*SRSPQL
Trigger: TAATTGGGGACTTCTGCTCAACATGGCAGTGGCATG...ATGTTTGTGTGTCTTTCCAGCTTTATCCTGTAGCGTGTCTTTGTTCTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp GTGTCTGTTAGCAATCAGATAGCCTACAAGGCCGTCTTGATGGGTATGATCACCCTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 3 (lower is better)
Translates to: VSVSNQIAYKAVLMGMITLIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...GGTGATCATACCCATCAAGACGGCCTTGTAGGCTATCTGATTGCTAACAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp GATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACGTTCTTGACCACGTCTaGTCAATTCCAAAAGCATTT +
Preference number: 3 (lower is better)
Translates to: DLQSDECECPTSSPNMPNVLDHV*SIPKAF
Trigger: AAATGCTTTTGGAATTGACAAGACGTGGTCAAGAAC...GTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498133.5
3UTR GCA 72 bp TCTCATACCTTTCAGGAGAAAGGCAAGGAGACTACTTaGCTTACTGTCATATTATTGAGGGAATCAGCGCAA +
Preference number: 3 (lower is better)
Translates to: SHTFQEKGKETT*LTVILLRESAQ
Trigger: TTGCGCTGATTCCCTCAATAATATGACAGTAAGGCAAGTAGTCTCCTTGCCTTTCTCCTGAAAGGTATGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR-3UTR CAA 90 bp GTGGAGGAATGTCTAACAGGTGGGAAAATAAAGCAGCAAGTAGCCGCTTCCATACTGATTAGGACTATTTaGGTTTATTACCCTGGCATT +
Preference number: 3 (lower is better)
Translates to: VEECLTGGKIKQQVAASILIRTI*VYYPGI
Trigger: AATGCCAGGGTAATAAACCAAAATAGTCCTAATCAG...TATGGAAGCGGCTACTTGCTGCTTTATTTTCCCACCTGTTAGACATTCCTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CCA 72 bp AAAACACTATCTAGTTCCATTACCGTGAAATACAACTaGCCAAATCACTGTGGAGGAATGTCTAACAGGTGG +
Preference number: 3 (lower is better)
Translates to: KTLSSSITVKYN*PNHCGGMSNRW
Trigger: CCACCTGTTAGACATTCCTCCACAGTGATTTGGCCAGTTGTATTTCACGGTAATGGAACTAGATAGTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp GAAGAGGAAACATTATTCTGGTATCCAGTATGTCGCTaGGATGTTAAACGAGATAATGCTTGTGTGGGAATT +
Preference number: 3 (lower is better)
Translates to: EEETLFWYPVCR*DVKRDNACVGI
Trigger: AATTCCCACACAAGCATTATCTCGTTTAACATCTCAGCGACATACTGGATACCAGAATAATGTTTCCTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR TCA 72 bp GAAAGAAAATTATGCCGATGCTCAACTAGCATATACTaGTTAGGACTATTTTGGTTTATTACCCTGGCATTG +
Preference number: 3 (lower is better)
Translates to: ERKLCRCSTSIY*LGLFWFITLAL
Trigger: CAATGCCAGGGTAATAAACCAAAATAGTCCTAATCAGTATATGCTAGTTGAGCATCGGCATAATTTTCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLRHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
3UTR CAA 72 bp ATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTaGCCCTCAGACGGCGGCACGGGCTTCTTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: MGFISPAGDSLD*PSDGGTGFFSL
Trigger: CAGCGAGAAGAAGCCCGTGCCGCCGTCTGAGGGCAAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQARHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLESLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGGCGGCGGCGGCAGTTaGTTCCGACAGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVGGGGS*FRQGPP
Trigger: TGGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCC...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCCCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGAAGCTATATCTAGTTaGACCCCTGGCCCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQEAISS*TPGPGP
Trigger: GGGGCCAGGGCCAGGGGTTCAACTAGATATAGCTTC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611738.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGGGCGGCGGCGGCAGTTaGTTCCGACAGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGGGGGS*FRQGPP
Trigger: TGGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCC...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACCCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVRHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGRHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCCTGCCTTGGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTPALAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCCAAGGCAGG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTATTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCCTGGCTTCGATTGGTaGTTGAATGCGCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNPGFDW*LNALSQ
Trigger: TTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCAGCACGGCACAGTGGTaGGCACCTATAGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTSTAQW*APIVPA
Trigger: GGCTGGGACTATAGGTGCCCACCACTGTGCCGTGCT...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTTGAACCCCTTGGGGTaGGGAAAGATGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNLNPLG*GKMLLL
Trigger: CAAGAGCAACATCTTTCCTCACCCCAAGGGGTTCAA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTCCCCAGCCACCTTGCTaGATGATGTACTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPPQPPC*MMYSAE
Trigger: TTCGGCAGAGTACATCATTCAGCAAGGTGGCTGGGG...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR TCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGATCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQSAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCCGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGGCGGCGGCGGCAGTTaGTTCCGACAGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMGGGGS*FRQGPP
Trigger: TGGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCC...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: GSSAGTTSSTSVGSVVAAPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...AGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTAAGGGGTATCAAGAATaGCTCGAGGGGGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLKGYQE*LEGEMG
Trigger: ACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTT...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCCCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGACCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp TCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTGGCAGGCTTTCTCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: SIAICCQDSGPSDTGRLSPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...AGAAAGCCTGCCAGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACGCTTGTGTGGGAATTTaGGCAGAAGCTCTAGGTCGT +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNACVGI*AEALGR
Trigger: ACGACCTAGAGCTTCTGCCCAAATTCCCACACAAGC...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCACCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCAACACTGGAGAAGTGTaGCGGTCAAAGCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGINTGEV*RSKPVL
Trigger: CAGCACAGGCTTTGACCGTCACACTTCTCCAGTGTT...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317582.10
ENST00000355028.4
ENST00000418951.6
ENST00000611738.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCTGGATTGGCAGGGCTaGACACTGGAGAAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTLDWQG*TLEKCD
Trigger: GTCACACTTCTCCAGTGTTCAGCCCTGCCAATCCAG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCGAAGCTTCGGGGACTTaGCAGACTGAGTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAEASGT*QTESRA
Trigger: TGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTC...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGCCTCCTATTTCTTTCTCAGAGCCAGGGCTACCCCGATGGCCACTGCCAGGATGCACACCGCAGGTACTaGCTGATTTCTGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLLFLSQSQGYPDGHCQDAHRRY*LISVGP
Trigger: TGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGC...ATCCTGGCAGTGGCCATCGGGGTAGCCCTGGCTCTGAGAAAGAAATAGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGGACGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: PHPVNSGADQELPEKANGRHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...TCCATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCGCCATGTTGGAGGGTaGGGTCACCCCGGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHRHVGG*GHPGVP
Trigger: AGGCACGCCGGGGTGACCTCACCCTCCAACATGGCG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGCATTCCCGAAATGCCTaGTATGTCACTGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQHSRNA*YVTGLQ
Trigger: CTGAAGGCCAGTGACATATCAGGCATTTCGGGAATG...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000498133.5
ENST00000543133.5
CDS-3UTR GCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTAGGATCCATTGCAATCTaGTGCCAGGACTCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILGSIAI*CQDSGP
Trigger: AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCC...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGATGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ACTCTGCCGAATAGTCCTCCAGGTATGTCACGCCAAACTGCAGCAGTGCGCTCATACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLPNSPPGMSRQTAAVRSYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...TGAGCGCACTGCTGCAGTTTGGCGTGACATACCTGGAGGACTATTCGGCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399777.1
ENST00000498133.5
CDS-3UTR GCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTTACCCCGATGGCCACTaGCAGGATGGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGYPDGH*QDGNSS
Trigger: GCTGCTGTTGCCATCCTGGCAGTGGCCATCGGGGTA...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTGCCTAACATGCCACTaGCATGTTGAGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQCLTCH*HVEQKS
Trigger: GGACTTCTGCTCAACATGGCAGTGGCATGTTAGGCA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGCGATTGGTGCTTGAATaGGCTCAGCCAATGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQRLVLE*AQPMGV
Trigger: CACACCCATTGGCTGAGCGCATTCAAGCACCAATCG...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGCAAAAAGCAGGAGCTaGAGTAGGAAGCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQAKSRS*SRKQSS
Trigger: TGAGGACTGCTTCCTACTGCAGCTCCTGCTTTTTGC...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTTCTTATTCCAGCCGCTaGCATGAACTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLSYSSR*HELWSP
Trigger: TGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGA...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498133.5
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTCACAGTTGGAGACTCTaGGGGACTGACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPHSWRL*GTDLSR
Trigger: TCTGGACAAGTCAGTCCCCCAGAGTCTCCAACTGTG...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGCAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCTGCTTTCACCTCTCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: AGTTSSTSVGSVVAAFTSRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...AGAGGTGAAAGCAGCAACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCACCTCAGACAGCGGCATaGGCTTCATCTCACCGGCGG +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPPQTAA*ASSHRR
Trigger: CCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGG...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGTTGTTGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: SVGSSAGTTSSTSVGSVVASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...AACAACTGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACCCAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NSTSAKAEKPGPGGGALPSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...GGGTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTCCTTATTCCAGCCGCTaGCATGAACTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPPYSSR*HELWSP
Trigger: TGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGG...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611738.4
3UTR CAA 72 bp GCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTaGCCCTCAGACAGCGGCATGGGCTTCATCTCACCG +
Preference number: 4 (lower is better)
Translates to: ATAAAPPNSSID*PSDSGMGFISP
Trigger: CGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCATTCCCGAAATGCCTaGTATGTCACTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTHSRNA*YVTGWL
Trigger: GAGCCAGCCAGTGACATATCAGGCATTTCGGGAATG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp CAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: QQRFCGFQCGDHLLHFSRALKGS*PRLVNS
Trigger: GGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGC...CCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR TCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLALKGS*PRLVNS
Trigger: GGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGC...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR TCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp TCCCCAATTATCCCAGAGTGTTCCACAAATGTCCAGACAGCTGCTGGAGGTTCATCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: SPIIPECSTNVQTAAGGSSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...TGAACCTCCAGCAGCTGTCTGGACATTTGTGGAACACTCTGGGATAATTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: KLFTSSGSIAICCQDSGPSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...AGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp ACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCAGGAACCTGGGGGTaGAGAGGAACAGTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: TFSFVISGRGCHWHLVGGAGTWG*RGTVQS
Trigger: GGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGC...TCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLESAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGACCGCAGGTACTGACTaGTTTCTGTGGGCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLETAGTD*FLWAQN
Trigger: ATTCTGGGCCCACAGAAATCAGTCAGTACCTGCGGT...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTGCACACCGCAGGTACTaGCTGATTTCTGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGAHRRY*LISVGP
Trigger: TGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGC...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCACGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTCGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACCCTGGCCCTGGCCCCTaGCCCAGAAGAGATGAAAGA +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNPGPGP*PRRDER
Trigger: TCTTTCATCTCTTCTGGGGCAGGGGCCAGGGCCAGG...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
CDS-3UTR GCA 90 bp AGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGTAGGTTCAGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: SVSVGSSAGTTSSTSVGSGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...TGAACCTACTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTCTCTCCAGCTCCGTTaGTGTCTAAGCTTTTCACTT +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNSLQLR*CLSFSL
Trigger: AAGTGAAAAGCTTAGACAGCAACGGAGCTGGAGAGA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGCCAGGAAGTGTCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: QLWLADSDTGKLSDCQEVSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...CACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp AATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCATCAGGAAGTGCCTCTTaGAGCTCCCGCGCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: NAGEKGYQECLEGEMGEPSGSAS*SSRAGK
Trigger: CTTGCCAGCGCGGGAGCTGCAAGAGGCACTTCCTGA...TGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTTTCTGTGGGTTCCAGTaGGGGGACCACCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPFCGFQ*GDHLLH
Trigger: GTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAA...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTCAGATGAATGTGAATaGCCCACCTCAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQSDECE*PTSSPN
Trigger: GTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTCGGTCCTGGAGGGGGTaGTTTACCCCTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSRSWRG*FTPKIL
Trigger: GAGAATCTTAGGGGTAAAGCACCCCCTCCAGGACCG...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTAGAGTTACTTGCAGTTaGACTCACAAGTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPRVTCS*THKWGP
Trigger: GGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCAAGGGGTATCAAGAATaGCTCGAGGGGGAGATGGGT +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAKGYQE*LEGEMG
Trigger: ACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTT...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCTGTCTAAGCTTTTCACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: CCLSFSLLQDPLQSAARTEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...AGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGTGAAAAGCTTAGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337612.9
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGAGGACGCCATTGAATTaGCTGGTGAGGCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQRTPLN*LVRLQK
Trigger: TTTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCT...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTACAGACTGCCAGGAAGTaGTCACAGTTGGAGACTCTG +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILQTARK*SQLETL
Trigger: CAGAGTCTCCAACTGTGACCACTTCCTGGCAGTCTG...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTCTGTGTGCCAACTCTaGCTAGCTGACAGTGACACA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSVCQL*LADSDT
Trigger: TGTGTCACTGTCAGCTAGCCAGAGTTGGCACACAGA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGCCAGGAAGTGTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QLWLADSDTGKLSDCQEVLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...CACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTTGCAGCTCCCGCGCTaGCAAGACCACAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGLQLPR*QDHRSH
Trigger: GTGGCTTCTGTGGTCTTGCCAGCGCGGGAGCTGCAA...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAACTCTGGCTAGCTGACAGTGACACAGGTAAGCTCTCAGACTGCCAGGAAGTGCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QLWLADSDTGKLSDCQEVRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...CACTTCCTGGCAGTCTGAGAGCTTACCTGTGTCACTGTCAGCTAGCCAGAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTGTCCAGACAGCTGCTaGAGGTTCAAATTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGICPDSC*RFKFQP
Trigger: TGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACA...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGATGAGCGGAGGCCCTTaGGATTTACAGTCAGATGAA +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQMSGGP*DLQSDE
Trigger: TTCATCTGACTGTAAATCCCAAGGGCCTCCGCTCAT...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGCAAGCCCTCGCCCGTaGGATCTTAGCAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNASPRP*DLSRNL
Trigger: CAGGTTCCTGCTAAGATCCCACGGGCGAGGGCTTGC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCTTATGGAGGTGGAAGGAATaGCCTCCTACTATCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRGLDRLSPEQALARGILWRWKE*PPTISS
Trigger: GGAGCTGATAGTAGGAGGCCATTCCTTCCACCTCCA...TAAGATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGASRGR*VNQKVN
Trigger: GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGC...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCCTCGCCCGTGGGATCGGTAGTGGCTGCATCTaGTATCCCTGGGACAGAAAT +
Preference number: 4 (lower is better)
Translates to: KLRGLDRLSPEQALARGIGSGCI*YPWDRN
Trigger: ATTTCTGTCCCAGGGATACCAGATGCAGCCACTACC...GATCCCACGGGCGAGGGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACGAGATAATGCTTGTGTaGGAATTTGGGCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNEIMLV*EFGQKL
Trigger: GAGCTTCTGCCCAAATTCCCACACAAGCATTATCTC...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAATTAGAGGAGTTGTTCTCACTCTTCTCTCCAGCTCCGTTGCTGTCTAAGCTTCCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: ELEELFSLFSPAPLLSKLPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...AAGCTTAGACAGCAACGGAGCTGGAGAGAAGAGTGAGAACAACTCCTCTAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTCCGCCGCCGCCATGTTaGAGGGTGAGGTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: KCPDSCWRFKFQPIQLQPPPPPC*RVRSPR
Trigger: CCGGGGTGACCTCACCCTCCAACATGGCGGCGGCGG...AGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCTTGAACCCCTTGGGGTaGGGAAAGATGTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTLNPLG*GKMLLL
Trigger: CAAGAGCAACATCTTTCCTCACCCCAAGGGGTTCAA...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCCAAGCAGTCTTCCATTaGGCTTTCTGGATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTQAVFH*AFWIGR
Trigger: CCTGCCAATCCAGAAAGCTCAATGGAAGACTGCTTG...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGATTCCAGCCGCTGGCATaGACTGTGGTCTCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRFQPLA*TVVSSV
Trigger: TACACTGGAGACCACAGTTCATGCCAGCGGCTGGAA...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498133.5
CDS-3UTR TCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCGCGCTCAAAGGTTCTTaGCCACGTCTTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTALKGS*PRLVNS
Trigger: GGAATTGACAAGACGTGGTCAAGAACCTTTGAGCGC...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR TCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCTGCTATCTTCTGCAGTaGTTCCAGGGTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLCYLLQ*FQGIPP
Trigger: AGGAGGAATACCCTGGAATCACTGCAGAAGATAGCA...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp GTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGCCATGTTGAGGAGACTCTGGGGGACTaGCTTGTCCAGAGTTGTCGC +
Preference number: 4 (lower is better)
Translates to: VNAPPQALTCLTCHCHVEETLGD*LVQSCR
Trigger: GCGACAACTCTGGACAAGTCAGTCCCCCAGAGTCTC...CTCAACATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGAGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGCAGGGAGGTGGCAGTaGTATGTGGAAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPAGRWQ*YVEARE
Trigger: CTCCCTTGCTTCCACATATCACTGCCACCTCCCTGC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACTGGATTTCTCAACTGTaGTCACTTCTGTGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNWISQL*SLLCQV
Trigger: AACCTGACACAGAAGTGATCACAGTTGAGAAATCCA...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGATGCCACTGCCATGTTaGGCAGAAGTCCCCAATTAT +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQMPLPC*AEVPNY
Trigger: ATAATTGGGGACTTCTGCTCAACATGGCAGTGGCAT...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp CACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCCACTTCAGATTCTCAATTTAGCATaGGCGGAGGCCCTTGGGATT +
Preference number: 4 (lower is better)
Translates to: HSAAFLWVPVRGPPPPLQILNLA*AEALGI
Trigger: AATCCCAAGGGCCTCCGCTCATGCTAAATTGAGAAT...CTGAAGTGGAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR TCA 90 bp TCCACAAATGTCCAGACAGCTGCTGGAGGTTCAAATTCCAGCCAATACAACTCCTCCCTGAGAGGCAGCTaGGAGTACGGGCGAGCACCC +
Preference number: 4 (lower is better)
Translates to: STNVQTAAGGSNSSQYNSSLRGS*EYGRAP
Trigger: GGGTGCTCGCCCGTACTCTCAGCTGCCTCTCAGGGA...GGAGTTGTATTGGCTGGAATTTGAACCTCCAGCAGCTGTCTGGACATTTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGGAACAGTGCAGTCCCTaGGAGGCAGCTGAGAGTACG +
Preference number: 4 (lower is better)
Translates to: RDIFVCHLWEGVPLASSGEQCSP*EAAEST
Trigger: CGTACTCTCAGCTGCCTCTCAGGGACTGCACTGTTC...CCCACTAGATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCCTCAGCCAATGGGTGTaGGGATCCAGAACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLLSQWV*GSRTGK
Trigger: CTTGCCAGTTCTGGATCCTCACACCCATTGGCTGAG...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACTCAGCAGCTCAGAGATaGACCTGGCTTCGATTGGTG +
Preference number: 4 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYSAAQR*TWLRLV
Trigger: CACCAATCGAAGCCAGGTTCATCTCTGAGCTGCTGA...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTGCACACCGCAGGTACTaGCTGATTTCTGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPAHRRY*LISVGP
Trigger: TGGGCCCACAGAAATCAGTCAGTACCTGCGGTGTGC...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR TCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGACGAGGGGGAGATGGGTaGACCAGAAGGTCAACAGTT +
Preference number: 4 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRRGGDG*TRRSTV
Trigger: AACTGTTGACCTTCTGGTTCACCCATCTCCCCCTCG...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTGGCGGCGGCGGCAGTTaGTTCCGACAGGGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSGGGGS*FRQGPP
Trigger: TGGGGGACCCTGTCGGAAGCAACTGCCGCCGCCGCC...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCTATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR GCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCTATGTCACGCCAAACTaGAGCAGTGCGCTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQAYVTPN*SSALKG
Trigger: ACCTTTGAGCGCACTGCTGCAGTTTGGCGTGACATA...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCTCTAGCCAGAGTTACTTGCAGTTGCACTCACAAGTGGGGACCCCAGGTCTCGGCAGGCTTTCTGTGTaGCAACTCTGGCTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LSSQSYLQLHSQVGTPGLGRLSV*QLWLAD
Trigger: GTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCC...GAGACCTGGGGTCCCCACTTGTGAGTGCAACTGCAAGTAACTCTGGCTAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAACAGCACTAGTGCCAAGGCTGAGAAACCCGGTCCTGGAGGGGGTGCTTTACTCCATTGCAATCTGCTaGCAGGACTCAGGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: RTALVPRLRNPVLEGVLYSIAIC*QDSGPS
Trigger: ACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGA...GTAAAGCACCCCCTCCAGGACCGGGTTTCTCAGCCTTGGCACTAGTGCTGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTCCTTCTCACTCAGCAGCGTTTCTGTGGGTTCCAGTGCGGGGACCACCTCCTCTTCTTCAGGATCCATTaGAATCTGCTGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: LLLTQQRFCGFQCGDHLLFFRIH*NLLPGL
Trigger: GAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAA...GAGGAGGTGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGAGTGAGAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GGAGGCCCTTGGGATTTACAGTCAGATGAATGTGAATGCCCCACCTCAAGCCCTCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GGPWDLQSDECECPTSSPQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...AGGGCTTGAGGTGGGGCATTCACATTCATCTGACTGTAAATCCCAAGGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACCAGCAGCCTCTTCCATaGCCTCGGGCACCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNQQPLP*PRAPLL
Trigger: AAGAAGAGGTGCCCGAGGGCATGGAAGAGGCTGCTG...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TCAGATGAATGTGAATGCCCCACCTCAAGCCCTAACATGCCTAACATGCCACTGTGGGGCTTCAGGAAGTaGCTCTTGCAGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: SDECECPTSSPNMPNMPLWGFRK*LLQLPR
Trigger: GCGCGGGAGCTGCAAGAGGCACTTCCTGAAGCCCCA...CAGTGGCATGTTAGGCATGTTAGGGCTTGAGGTGGGGCATTCACATTCATCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGGACAGCCCCAACAGGTTCAGTTGTTGCTaGTTTCACCTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GCHWHLVGGAHHTQDSPNRFSCC*FHLFFI
Trigger: GATGAAGAAGAGGTGAAAGCAGCAACAACTGAACCT...GTTGGGGCTGTCCTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp GCCCTCAGACAGCGGCATGGGCTTCATCTCACCGGCGGGGGACAGTCTAGACTTAAGGCTCTCTTCCCTTaGGTTTATCTCCTTCTCACT +
Preference number: 4 (lower is better)
Translates to: ALRQRHGLHLTGGGQSRLKALFP*VYLLLT
Trigger: AGTGAGAAGGAGATAAACGCAAGGGAAGAGAGCCTT...AAGTCTAGACTGTCCCCCGCCGGTGAGATGAAGCCCATGCCGCTGTCTGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR GCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGCCTCAAGCCCTAACATaGCTAACATGCCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLEPQALT*LTCHCH
Trigger: ATGGCAGTGGCATGTTAGGCATGTTAGGGCTTGAGG...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTAGTGGGTGCAGAGCCTaGTCATCGAGAAAGATGAAA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPSGCRA*SSRKMK
Trigger: TTTCATCTTTCTCGATGAGCAGGCTCTGCACCCACT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGAAGGAAGAACAGGGATaGTGCCACATCCTGTTAACT +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQKEEQG*CHILLT
Trigger: AGTTAACAGGATGTGGCAGCATCCCTGTTCTTCCTT...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp CTATCCCAATTCTTCCTAAGTAAACCCTCTCTCGCTAAAGCAGTGGGTCTCAATGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: LSQFFLSKPSLAKAVGLNEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...ATTGAGACCCACTGCTTTAGCGAGAGAGGGTTTACTTAGGAAGAATTGGGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR GCA 90 bp TGCTGGAGGTTCAAATTCCAGCCAATACAACTCCAACCTTACATCCTTCTGTCTGAGGTCACCCCGGCGTaGCTTCGTCACGGCCGGCGT +
Preference number: 4 (lower is better)
Translates to: CWRFKFQPIQLQPYILLSEVTPA*LRHGRR
Trigger: ACGCCGGCCGTGACGAAGGCACGCCGGGGTGACCTC...AGACAGAAGGATGTAAGGTTGGAGTTGTATTGGCTGGAATTTGAACCTCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337612.9
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CGCCCGTGGGATCTTAGCAGGAACCTGGGGGTGAAGAGGAACAGTGCAGTCCCTAGGACGCCATTGAATTaGCTGGTGAGGCTCCAAAAA +
Preference number: 4 (lower is better)
Translates to: RPWDLSRNLGVKRNSAVPRTPLN*LVRLQK
Trigger: TTTTTGGAGCCTCACCAGCCAATTCAATGGCGTCCT...AGGGACTGCACTGTTCCTCTTCACCCCCAGGTTCCTGCTAAGATCCCACGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000616863.4
CDS-3UTR CCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCTGCCTGATATGTCACTaGCTGGCTCAGGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQACLICH*LAQEHL
Trigger: CAAATGCTCCTGAGCCAGCCAGTGACATATCAGGCA...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000317582.10
ENST00000611738.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCTGCCTGATATGTCACTaGCTGGCTCAGGAGCATTTG +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTCLICH*LAQEHL
Trigger: CAAATGCTCCTGAGCCAGCCAGTGACATATCAGGCA...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CCA 90 bp GGAGCTGCAGTAGGAAGCAGTCCTCATGAGGGCTGTTCCCTTCCACTGCTGGAGTCTTATTCCAGCCGCTaGCATGAACTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GAAVGSSPHEGCSLPLLESYSSR*HELWSP
Trigger: TGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGA...CTCCAGCAGTGGAAGGGAACAGCCCTCATGAGGACTGCTTCCTACTGCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000317582.10
ENST00000543133.5
ENST00000618481.4
CDS-3UTR CCA 90 bp GGCACAGTGGTGGGCACCTATAGTCCCAGCCTGTGCTCTTGGCTATTCAGGACCTCTTATTCCAGCCGCTaGCATGAACTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GTVVGTYSPSLCSWLFRTSYSSR*HELWSP
Trigger: TGGAGACCACAGTTCATGCCAGCGGCTGGAATAAGA...GGTCCTGAATAGCCAAGAGCACAGGCTGGGACTATAGGTGCCCACCACTGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493680.5
CDS-3UTR CCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGAGGAAGTGGTCACAGTTaGAGACTCTGGGGGACTGAC +
Preference number: 4 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRGSGHS*RLWGTD
Trigger: GTCAGTCCCCCAGAGTCTCCAACTGTGACCACTTCC...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GAAATGCAGGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EMQVRRGIKNASRGRWVNGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...GTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACCTGCATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTCAACGGTGGCAGTGATATGTaGAAGCAAGGGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RRGIKNASRGRWVNQKVNGGSDM*KQGSWG
Trigger: GCCCCAGCTCCCTTGCTTCCACATATCACTGCCACC...GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGGACAGCCCCAACACAGAGAATGGTCAGAACAGCACTAGTGCCAAGGCTGAGATCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: RTAPTQRMVRTALVPRLRSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...TCTCAGCCTTGGCACTAGTGCTGTTCTGACCATTCTCTGTGTTGGGGCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CTCAGAGATGAACCTGGCTTCGATTGGTGCTTGAATGCGCTCAGCCAATGGGTGTCAGCAGCGTTTCTGTaGGTTCCAGTGCGGGGACCA +
Preference number: 4 (lower is better)
Translates to: LRDEPGFDWCLNALSQWVSAAFL*VPVRGP
Trigger: TGGTCCCCGCACTGGAACCCACAGAAACGCTGCTGA...CACCCATTGGCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTCATCTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp ACTTCTTCAGGATCCATTGCAATCTGCTGCCAGGACTCAGGGCCTAGTGACACTCGGGCTTCTTCTCGCTaGCAGGGGACAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: TSSGSIAICCQDSGPSDTRASSR*QGTALP
Trigger: TGGAAGAGCTGTCCCCTGCCAGCGAGAAGAAGCCCG...AGTGTCACTAGGCCCTGAGTCCTGGCAGCAGATTGCAATGGATCCTGAAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp CAATGTCTAGAGACATTTTCGTTTGTCATCTCTGGGAGGGGGTGCCACTGGCATCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: QCLETFSFVISGRGCHWHPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...ATGCCAGTGGCACCCCCTCCCAGAGATGACAAACGAAAATGTCTCTAGACATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000418951.6
ENST00000498133.5
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp TGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAAAGCCAATGCCAGGGCTACCCCGATaGCCACTGCCAGGATGGCAA +
Preference number: 4 (lower is better)
Translates to: CHILLTQELTKSYQRKPMPGLPR*PLPGWQ
Trigger: TTGCCATCCTGGCAGTGGCCATCGGGGTAGCCCTGG...CATTGGCTTTCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGATGGCAACAGCAGCAGCCCCTCCAAACAGCAGTATAGACTTGCCCTCAGAAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QDGNSSSPSKQQYRLALRSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...TCTGAGGGCAAGTCTATACTGCTGTTTGGAGGGGCTGCTGCTGTTGCCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000399777.1
ENST00000498133.5
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp GGTGAGAAGGGGTATCAAGAATGCCTCGAGGGGGAGATGGGTGAACCAGAAGGTAGTTGCACTCACAAGTaGGGACCCCAGGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GEKGYQECLEGEMGEPEGSCTHK*GPQVSF
Trigger: GAAGGAGACCTGGGGTCCCCACTTGTGAGTGCAACT...ACCTTCTGGTTCACCCATCTCCCCCTCGAGGCATTCTTGATACCCCTTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp GGGCCTAGTGACACTGGCAGGCTTTCTGTGTGCCAACTCTGGCTAGCTGACAGTGAACCTGGCTTCGATTaGTGCTTGAATGCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GPSDTGRLSVCQLWLADSEPGFD*CLNALS
Trigger: GCTGAGCGCATTCAAGCACCAATCGAAGCCAGGTTC...ACTGTCAGCTAGCCAGAGTTGGCACACAGAAAGCCTGCCAGTGTCACTAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337612.9
ENST00000355028.4
ENST00000538149.5
ENST00000616863.4
CDS-3UTR CCA 90 bp ATCTCTGGGAGGGGGTGCCACTGGCATCTAGTGGGTGGAGCCCACCACACACAGTTAGAGGGTATAAGTTaGAGGTGGAAGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: ISGRGCHWHLVGGAHHTQLEGIS*RWKEWP
Trigger: AGGCCATTCCTTCCACCTCCAACTTATACCCTCTAA...CTGTGTGTGGTGGGCTCCACCCACTAGATGCCAGTGGCACCCCCTCCCAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp CAGGGATGCTGCCACATCCTGTTAACTCAGGAGCTGACCAAGAGCTACCAGAGAGCCTCGAGGGGGAGATaGGTGAACCAGAAGGTCAAC +
Preference number: 4 (lower is better)
Translates to: QGCCHILLTQELTKSYQRASRGR*VNQKVN
Trigger: GTTGACCTTCTGGTTCACCCATCTCCCCCTCGAGGC...TCTCTGGTAGCTCTTGGTCAGCTCCTGAGTTAACAGGATGTGGCAGCATCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000317582.10
ENST00000337612.9
ENST00000355028.4
ENST00000418951.6
ENST00000538149.5
ENST00000543133.5
ENST00000611738.4
ENST00000616863.4
ENST00000618481.4
CDS-3UTR CCA 90 bp AGGTGGAGCTGCAGGAAGCTTCGGGGACTTGACAGACTGAGTCCAGAGCAAGCCTGCATCTGGTATCCCTaGGACAGAAATGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RWSCRKLRGLDRLSPEQACIWYP*DRNAGE
Trigger: CTCACCTGCATTTCTGTCCCAGGGATACCAGATGCA...GGCTTGCTCTGGACTCAGTCTGTCAAGTCCCCGAAGCTTCCTGCAGCTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000317582.10