RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCL11B (Homo sapiens)

Ensembl gene IDs: ENSG00000127152

Ensembl transcript IDs: ENST00000345514.2, ENST00000357195.8, ENST00000443726.2

Found 603 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATaGACAACCTCAGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCT +
Preference number: 1 (lower is better)
Translates to: PWHPRAHQQDSICWS*TTSECCRAISQRSP
Trigger: AGGGCTCCTCTGGGAAATGGCCCGACAGCATTCTGAGGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CCA 90 bp GCTGGTGAGCACTGGCTAGCTGTTATGACTACAGGAAGACCACCCTaGAGGCACTCTAGGACCTCAGTGGGGCATCCAAAGGCAACAGCA +
Preference number: 1 (lower is better)
Translates to: AGEHWLAVMTTGRPP*RHSRTSVGHPKATA
Trigger: TGCTGTTGCCTTTGGATGCCCCACTGAGGTCCTAGAGTGCCTCCAGGGTGGTCTTCCTGTAGTCATAACAGCTAGCCAGTGCTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 90 bp GCTTGTGCTTTGGGATGGCTTAGTCCTGGCAATCTGGTAAGCTGGTaGGCACTGGCTAGCTGTTATGACTACAGGAAGACCACCCTGGAG +
Preference number: 1 (lower is better)
Translates to: ACALGWLSPGNLVSW*ALASCYDYRKTTLE
Trigger: CTCCAGGGTGGTCTTCCTGTAGTCATAACAGCTAGCCAGTGCTCACCAGCTTACCAGATTGCCAGGACTAAGCCATCCCAAAGCACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR GCA 90 bp TTGCTTTGCAGGGCTGAGTTACAAGGAGCACCAAAATCACGGGTTTaGCTGTGTTCCACGAGACCTTCGGCTGACGGTTACTTAGGACCG +
Preference number: 1 (lower is better)
Translates to: LLCRAELQGAPKSRV*LCSTRPSADGYLGP
Trigger: CGGTCCTAAGTAACCGTCAGCCGAAGGTCTCGTGGAACACAGGCAAACCCGTGATTTTGGTGCTCCTTGTAACTCAGCCCTGCAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 90 bp CTCTCCATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTaGAATCCAATTTGTACCGGTCTCAACAGCAGGTCACTTCACCTG +
Preference number: 1 (lower is better)
Translates to: LSMARKVLAVMESPS*NPICTGLNSRSLHL
Trigger: CAGGTGAAGTGACCTGCTGTTGAGACCGGTACAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR GCA 90 bp GCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCTCAGAATaGTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCT +
Preference number: 1 (lower is better)
Translates to: AHQQDSICWSCTTSE*CRAISQRSPPKTLS
Trigger: AGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCTGAGGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 90 bp AAGACAAGAGGCCAACACTCTCCATGGCACGAAAGGTCCTGGCTGTaGTGGAGTCTCCTTCCTGAAATCCAATTTGTACCGGTCTCAACA +
Preference number: 1 (lower is better)
Translates to: KTRGQHSPWHERSWL*WSLLPEIQFVPVST
Trigger: TGTTGAGACCGGTACAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 90 bp TATGGAAAGGCACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTaGCGGAATGTAGGTTTCAGAGAGCAAAGCAGCAAAGCAGGGAAG +
Preference number: 1 (lower is better)
Translates to: YGKAPNSSQALAFGN*RNVGFREQSSKAGK
Trigger: CTTCCCTGCTTTGCTGCTTTGCTCTCTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGTGCCTTTCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 90 bp ATGGTAGAGAAGGAAGATGTTCTCTCGCTCTCTCTCCTCTACATCTaGCATCTTAGAGATGGCCTCTTAGAGAAAGGGAGGACGATGTGG +
Preference number: 1 (lower is better)
Translates to: MVEKEDVLSLSLLYI*HLRDGLLEKGRTMW
Trigger: CCACATCGTCCTCCCTTTCTCTAAGAGGCCATCTCTAAGATGTCAGATGTAGAGGAGAGAGAGCGAGAGAACATCTTCCTTCTCTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CCA 90 bp AATTCAGTCTCCTTCTCTCCCCATGAAAGACCCTCTAATGCCAAGTaGCAGGTTCCAATTGGGGGCAACTTTGAACAAAGTTGTGGCAGT +
Preference number: 1 (lower is better)
Translates to: NSVSFSPHERPSNAK*QVPIGGNFEQSCGS
Trigger: ACTGCCACAACTTTGTTCAAAGTTGCCCCCAATTGGAACCTGCCACTTGGCATTAGAGGGTCTTTCATGGGGAGAGAAGGAGACTGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 90 bp CGCTTGACTCGGGACGACATGAGTGCTACATCTCCATTCCAGTTCTaGAACAAAGTGCTACGACTTGAAAGATTGTTATCCGCTGTACAT +
Preference number: 1 (lower is better)
Translates to: RLTRDDMSATSPFQF*NKVLRLERLLSAVH
Trigger: ATGTACAGCGGATAACAATCTTTCAAGTCGTAGCACTTTGTTTCAGAACTGGAATGGAGATGTAGCACTCATGTCGTCCCGAGTCAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR GCA 90 bp TTGCCTTGCCAGTACAAATGCAAACAACTTAAATCAATGGGACTTTaGTTTGCAGGGCTGAGTTACAAGGAGCACCAAAATCACGGGTTT +
Preference number: 1 (lower is better)
Translates to: LPCQYKCKQLKSMGL*FAGLSYKEHQNHGF
Trigger: AAACCCGTGATTTTGGTGCTCCTTGTAACTCAGCCCTGCAAAGCAAAGTCCCATTGATTTAAGTTGTTTGCATTTGTACTGGCAAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 90 bp AATTTGTACCGGTCTCAACAGCAGGTCACTTCACCTGGACCCAGCTaGATCACCAGCTCCTTTTATGATATTTGTGTTTGTTTCACAATT +
Preference number: 1 (lower is better)
Translates to: NLYRSQQQVTSPGPS*ITSSFYDICVCFTI
Trigger: AATTGTGAAACAAACACAAATATCATAAAAGGAGCTGGTGATTCAGCTGGGTCCAGGTGAAGTGACCTGCTGTTGAGACCGGTACAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 90 bp AAAATTACGAGCTCCAGTAAAAATACAGCAAGTGCCTACATCATATaGACCAACCAATATATCCATTCCAGAGGGAGGCGGGAAGAGAAA +
Preference number: 1 (lower is better)
Translates to: KITSSSKNTASAYII*TNQYIHSRGRREEK
Trigger: TTTCTCTTCCCGCCTCCCTCTGGAATGGATATATTGGTTGGTTCATATGATGTAGGCACTTGCTGTATTTTTACTGGAGCTCGTAATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR GCA 90 bp AAATACAGAAATTATTGCACAGTTAAAAGGCTCCACAATTTGTACTaGCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAG +
Preference number: 1 (lower is better)
Translates to: KYRNYCTVKRLHNLY*LNQPSGFHRTSQTQ
Trigger: CTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCAGTACAAATTGTGGAGCCTTTTAACTGTGCAATAATTTCTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR GCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAAGTTCCACTGTACAGGTaGGGGGCGCCGGGGCCCGCG +
Preference number: 2 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHEVPLYR*GAPGPA
Trigger: CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAAC...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR CCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAAGCGGCGCTGAGTCTGTaGGGTGCCTCCCCCAGCACC +
Preference number: 2 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHEAALSL*GASPST
Trigger: GGTGCTGGGGGAGGCACCCCACAGACTCAGCGCCGC...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CAA 90 bp TCTCTCCCCATGAAAGACCCTCTAATGCCAAGTGGCAGGTTCCAATaGGGGGCAACTTTGAACAAAGTTGTGGCAGTGCGGAAACCGGCC +
Preference number: 2 (lower is better)
Translates to: SLPMKDPLMPSGRFQ*GATLNKVVAVRKPA
Trigger: GGCCGGTTTCCGCACTGCCACAACTTTGTTCAAAGTTGCCCCCAATTGGAACCTGCCACTTGGCATTAGAGGGTCTTTCATGGGGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR GCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCCCCTCTAACATTGCTTaGGAGTCATTGCTCAGGCTA +
Preference number: 2 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTPSNIA*ESLLRL
Trigger: TAGCCTGAGCAATGACTCGCAAGCAATGTTAGAGGG...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR CCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCCAGCATTCTCTCGGTTaGCAACGGTTCCACTGTACA +
Preference number: 2 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGQHSLG*QRFHCT
Trigger: TGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR GCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCCTCCACAATTTGTACTaGCTTAATCAACCCTCGGGT +
Preference number: 2 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGLHNLY*LNQPSG
Trigger: ACCCGAGGGTTGATTAAGGCAGTACAAATTGTGGAG...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR TCA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGTCTCTCCTCTACATCTaGCATCTTAGAGATGGCCTC +
Preference number: 2 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLSLLYI*HLRDGL
Trigger: GAGGCCATCTCTAAGATGTCAGATGTAGAGGAGAGA...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR TCA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGCGTCTGCTTGGGAAATaGTGGATGACCCCTTGTAGC +
Preference number: 2 (lower is better)
Translates to: KSASNRKASAFGKELPKRRLLGK*WMTPCS
Trigger: GCTACAAGGGGTCATCCATCATTTCCCAAGCAGACG...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR TCA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGATAGTGCCAGTATTGTaGATGCCACGCTTAGCAATA +
Preference number: 2 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLIVPVL*MPRLAI
Trigger: TATTGCTAAGCGTGGCATTCACAATACTGGCACTAT...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR CCA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGAAAACAAAGAAGGGATaGATACCCAACAAAATCTCT +
Preference number: 2 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQKTKKG*IPNKIS
Trigger: AGAGATTTTGTTGGGTATCCATCCCTTCTTTGTTTT...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR GCA 90 bp TCAGAGAGAAGCCCAACACGAACGGTTCTCTGTGTAGGCCAATTCCGACAAAAATCTTGTTTTGTAAAATaGCCAGGCATTCTCGATTAT +
Preference number: 2 (lower is better)
Translates to: SERSPTRTVLCVGQFRQKSCFVK*PGILDY
Trigger: ATAATCGAGAATGCCTGGGCATTTTACAAAACAAGA...TTTTTGTCGGAATTGGCCTACACAGAGAACCGTTCGTGTTGGGCTTCTCTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR GCA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGACAAAAGCTTTAAAGTaGGGGTCAACAGAATTCAAA +
Preference number: 2 (lower is better)
Translates to: KSASNRKASAFGKELPKRTKALK*GSTEFK
Trigger: TTTGAATTCTGTTGACCCGCACTTTAAAGCTTTTGT...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CCA 72 bp AAGTTGTGGCAGTGCGGAAACCGGCCTGAGGTCGGCTaGGTCACCCATGCTAGAGGCCTCTCTCTCGGGATC +
Preference number: 3 (lower is better)
Translates to: KLWQCGNRPEVG*VTHARGLSLGI
Trigger: GATCCCGAGAGAGAGGCCTCTAGCATGGGTGACCCAGCCGACCTCAGGCCGGTTTCCGCACTGCCACAACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CCA 72 bp CCTCCAAAAACCCTATCTCTGGCGGCGCTGAGTCTGTaGGGTGCCTCCCCCAGCACCACCACTCAAGGTTTC +
Preference number: 3 (lower is better)
Translates to: PPKTLSLAALSL*GASPSTTTQGF
Trigger: GAAACCTTGAGTGGTGGTGCTGGGGGAGGCACCCCACAGACTCAGCGCCGCCAGAGATAGGGTTTTTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CCA 72 bp CAGGAAGACCACCCTGGAGGCACTCTAGGACCTCAGTaGGGCATCCAAAGGCAACAGCAGCCCCTGGATCTG +
Preference number: 3 (lower is better)
Translates to: QEDHPGGTLGPQ*GIQRQQQPLDL
Trigger: CAGATCCAGGGGCTGCTGTTGCCTTTGGATGCCCCACTGAGGTCCTAGAGTGCCTCCAGGGTGGTCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 72 bp TCCCATCTGGTCTGCTGTGGCCACACCAAGGAGCCTTaGTGCAAGGTTCGGGGCGTTCAGAGAGAAGCCCAA +
Preference number: 3 (lower is better)
Translates to: SHLVCCGHTKEP*CKVRGVQREAQ
Trigger: TTGGGCTTCTCTCTGAACGCCCCGAACCTTGCATCAAGGCTCCTTGGTGTGGCCACAGCAGACCAGATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR GCA 72 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTaGTGGTCATGCACAACCTCAGAATGCTGTCGGGCC +
Preference number: 3 (lower is better)
Translates to: PWHPRAHQQDSI*WSCTTSECCRA
Trigger: GGCCCGACAGCATTCTGAGGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR GCA 72 bp CCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATaGACAACCTCAGAATGCTGTCGGGCCATTTCCCAG +
Preference number: 3 (lower is better)
Translates to: PRAHQQDSICWS*TTSECCRAISQ
Trigger: CTGGGAAATGGCCCGACAGCATTCTGAGGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CCA 72 bp TGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTaGTCATGCACAACCTCAGAATGCTGTCGGGCCATT +
Preference number: 3 (lower is better)
Translates to: WHPRAHQQDSIC*SCTTSECCRAI
Trigger: AATGGCCCGACAGCATTCTGAGGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CCA 72 bp CACTGGCTAGCTGTTATGACTACAGGAAGACCACCCTaGAGGCACTCTAGGACCTCAGTGGGGCATCCAAAG +
Preference number: 3 (lower is better)
Translates to: HWLAVMTTGRPP*RHSRTSVGHPK
Trigger: CTTTGGATGCCCCACTGAGGTCCTAGAGTGCCTCCAGGGTGGTCTTCCTGTAGTCATAACAGCTAGCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR CAA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCTCAGCATTCTCTCGGTaGGCAACGGTTCCACTGTAC +
Preference number: 3 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGSAFSR*ATVPLY
Trigger: GTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGA...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR CAA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGCCACACCAAGGAGCCTaGATGCAAGGTTCGGGGCGT +
Preference number: 3 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQPHQGA*MQGSGR
Trigger: ACGCCCCGAACCTTGCATCAAGGCTCCTTGGTGTGG...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR GCA 72 bp AGGGCTGAGTTACAAGGAGCACCAAAATCACGGGTTTaGCTGTGTTCCACGAGACCTTCGGCTGACGGTTAC +
Preference number: 3 (lower is better)
Translates to: RAELQGAPKSRV*LCSTRPSADGY
Trigger: GTAACCGTCAGCCGAAGGTCTCGTGGAACACAGGCAAACCCGTGATTTTGGTGCTCCTTGTAACTCAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 72 bp GGCCAACACTCTCCATGGCACGAAAGGTCCTGGCTGTaGTGGAGTCTCCTTCCTGAAATCCAATTTGTACCG +
Preference number: 3 (lower is better)
Translates to: GQHSPWHERSWL*WSLLPEIQFVP
Trigger: CGGTACAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATGGAGAGTGTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR GCA 72 bp CAGGATAGTATCTGCTGGTCATGCACAACCTCAGAATaGTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAA +
Preference number: 3 (lower is better)
Translates to: QDSICWSCTTSE*CRAISQRSPPK
Trigger: TTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCTGAGGTTGTGCATGACCAGCAGATACTATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CCA 72 bp CCACTCAACACAAATAATTTCCCATCTGGTCTGCTGTaGCCACACCAAGGAGCCTTGATGCAAGGTTCGGGG +
Preference number: 3 (lower is better)
Translates to: PLNTNNFPSGLL*PHQGALMQGSG
Trigger: CCCCGAACCTTGCATCAAGGCTCCTTGGTGTGGCCACAGCAGACCAGATGGGAAATTATTTGTGTTGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR CAA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAATCAGCATTCTCTCGGTaGGCAACGGTTCCACTGTAC +
Preference number: 3 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHESAFSR*ATVPLY
Trigger: GTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGA...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR CAA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCCTACGACTTGAAAGATaGTTATCCGCTGTACATCCA +
Preference number: 3 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTLRLER*LSAVHP
Trigger: TGGATGTACAGCGGATAACAATCTTTCAAGTCGTAG...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR CAA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGGCAGCTCAGTTTGCATaGCTTTCTGCTGGTAAGGGC +
Preference number: 3 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLAAQFA*LSAGKG
Trigger: GCCCTTACCAGCAGAAAGCAATGCAAACTGAGCTGC...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 72 bp GCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTaGAATCCAATTTGTACCGGTCTCAACAGCAGGTCA +
Preference number: 3 (lower is better)
Translates to: ARKVLAVMESPS*NPICTGLNSRS
Trigger: TGACCTGCTGTTGAGACCGGTACAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 72 bp TTGGGATGGCTTAGTCCTGGCAATCTGGTAAGCTGGTaGGCACTGGCTAGCTGTTATGACTACAGGAAGACC +
Preference number: 3 (lower is better)
Translates to: LGWLSPGNLVSW*ALASCYDYRKT
Trigger: GGTCTTCCTGTAGTCATAACAGCTAGCCAGTGCTCACCAGCTTACCAGATTGCCAGGACTAAGCCATCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR CAA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAAGCTTCCCCTCTAACATaGCTTGCGAGTCATTGCTCA +
Preference number: 3 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHEASPLT*LASHCS
Trigger: TGAGCAATGACTCGCAAGCAATGTTAGAGGGGAAGC...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 72 bp GCACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTaGCGGAATGTAGGTTTCAGAGAGCAAAGCAGCAAA +
Preference number: 3 (lower is better)
Translates to: APNSSQALAFGN*RNVGFREQSSK
Trigger: TTTGCTGCTTTGCTCTCTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR GCA 72 bp ACACAGAAAAGGCCGCTTGACTCGGGACGACATGAGTaGTACATCTCCATTCCAGTTCTGAAACAAAGTGCT +
Preference number: 3 (lower is better)
Translates to: TQKRPLDSGRHE*YISIPVLKQSA
Trigger: AGCACTTTGTTTCAGAACTGGAATGGAGATGTAGCACTCATGTCGTCCCGAGTCAAGCGGCCTTTTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CCA 72 bp TCCTTCTCTCCCCATGAAAGACCCTCTAATGCCAAGTaGCAGGTTCCAATTGGGGGCAACTTTGAACAAAGT +
Preference number: 3 (lower is better)
Translates to: SFSPHERPSNAK*QVPIGGNFEQS
Trigger: ACTTTGTTCAAAGTTGCCCCCAATTGGAACCTGCCACTTGGCATTAGAGGGTCTTTCATGGGGAGAGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR CAA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGTTCCTGAAATCCAATTaGTACCGGTCTCAACAGCAG +
Preference number: 3 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQFLKSN*YRSQQQ
Trigger: CTGCTGTTGAGACCGGTACAAATTGGATTTCAGGAA...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR CAA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAAAAAAGGCTCCACAATTaGTACTGCCTTAATCAACCC +
Preference number: 3 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHEKRLHN*YCLNQP
Trigger: GGGTTGATTAAGGCAGTACAAATTGTGGAGCCTTTT...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 72 bp CCCAGCACCACCACTCAAGGTTTCCCTTATGTAATATaGAAGCCGAAATCAACACAGAAAAGGCCGCTTGAC +
Preference number: 3 (lower is better)
Translates to: PSTTTQGFPYVI*KPKSTQKRPLD
Trigger: GTCAAGCGGCCTTTTCTGTGTTGATTTCGGCTTTCATATTACATAAGGGAAACCTTGAGTGGTGGTGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 72 bp CGGTCTCAACAGCAGGTCACTTCACCTGGACCCAGCTaGATCACCAGCTCCTTTTATGATATTTGTGTTTGT +
Preference number: 3 (lower is better)
Translates to: RSQQQVTSPGPS*ITSSFYDICVC
Trigger: ACAAACACAAATATCATAAAAGGAGCTGGTGATTCAGCTGGGTCCAGGTGAAGTGACCTGCTGTTGAGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 72 bp CGGGACGACATGAGTGCTACATCTCCATTCCAGTTCTaGAACAAAGTGCTACGACTTGAAAGATTGTTATCC +
Preference number: 3 (lower is better)
Translates to: RDDMSATSPFQF*NKVLRLERLLS
Trigger: GGATAACAATCTTTCAAGTCGTAGCACTTTGTTTCAGAACTGGAATGGAGATGTAGCACTCATGTCGTCCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR TCA 72 bp AGCTCCAGTAAAAATACAGCAAGTGCCTACATCATATaGACCAACCAATATATCCATTCCAGAGGGAGGCGG +
Preference number: 3 (lower is better)
Translates to: SSSKNTASAYII*TNQYIHSRGRR
Trigger: CCGCCTCCCTCTGGAATGGATATATTGGTTGGTTCATATGATGTAGGCACTTGCTGTATTTTTACTGGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CCA 72 bp TCAATCTCAGCTGTCCCTTACAGTTTAACCCACCTCTaGGCCAAAGAGAAGAATATGCTGCAATTTCTTGTT +
Preference number: 3 (lower is better)
Translates to: SISAVPYSLTHL*AKEKNMLQFLV
Trigger: AACAAGAAATTGCAGCATATTCTTCTCTTTGGCCCAGAGGTGGGTTAAACTGTAAGGGACAGCTGAGATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR-3UTR CAA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGGCCACTGTGGCATTTTaGTATAACCTATTAAGCAAA +
Preference number: 3 (lower is better)
Translates to: KSASNRKASAFGKELPKRATVAF*YNLLSK
Trigger: TTTGCTTAATAGGTTATACAAAAATGCCACAGTGGC...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR GCA 72 bp CAGTACAAATGCAAACAACTTAAATCAATGGGACTTTaGTTTGCAGGGCTGAGTTACAAGGAGCACCAAAAT +
Preference number: 3 (lower is better)
Translates to: QYKCKQLKSMGL*FAGLSYKEHQN
Trigger: ATTTTGGTGCTCCTTGTAACTCAGCCCTGCAAAGCAAAGTCCCATTGATTTAAGTTGTTTGCATTTGTACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGAGGAGCTCGCCGTACTaGGGCAGTGCGCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: LSVGNGSTVQVRGAGARARSSPY*GSAPRP
Trigger: GGGCCTAGGCGCACTGCCGCAGTACGGCGAGCTCCT...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGTCGCCGAAGCCCGGGTaGTCCCGCAGGATGGGGCCC +
Preference number: 4 (lower is better)
Translates to: FSRLATVPLYRCGAPGPASPKPG*SRRMGP
Trigger: GGGCCCCATCCTGCGGGACCACCCGGGCTTCGGCGA...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGGGGTCGCTCTCGTGGTaGCGGAAGTCACCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LSVGNGSTVQVRGAGARAGSLSW*RKSPSA
Trigger: GGCCGACGGTGACTTCCGCCACCACGAGAGCGACCC...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGTCGGCACTGAGGCGGTaGGGGTCCAGGTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: FSRLATVPLYRCGAPGPASALRR*GSRWWR
Trigger: GCGCCACCACCTGGACCCGCACCGCCTCAGTGCCGA...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGGACTTGGGGCTGGGCTaGAAGGGGTTCAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LSVGNGSTVQVRGAGARADLGLG*KGFRSR
Trigger: CCGGCTCCTGAACCCCTTCCAGCCCAGCCCCAAGTC...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGGCGGCGCTGAGTCTGTaGGGTGCCTCCCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: FSRLATVPLYRCGAPGPAAALSL*GASPST
Trigger: GGTGCTGGGGGAGGCACCCCACAGACTCAGCGCCGC...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGGTTCACCTGGCAGGCTaGCGCCGGCCGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGVHLAG*RRPEGL
Trigger: CAGCCCCTCCGGCCGGCGCCAGCCTGCCAGGTGAAC...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR CCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCTCGCCGAAGCCCGGGTaGTCCCGCAGGATGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGASPKPG*SRRMGP
Trigger: GGGCCCCATCCTGCGGGACCACCCGGGCTTCGGCGA...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCTGAGCTCGGAGCGTaGGGAGGGTGGCGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGPELGA*GGWRAV
Trigger: GACAGCCCGCCACCCTCCTCACGCTCCGAGCTCAGG...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGGGGTTCAGGAGCCGGTaGATAGGGTTGCCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGGFRSR*IGLPRP
Trigger: GGGCCGCGGCAACCCTATGCACCGGCTCCTGAACCC...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
69% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGTTGCCGATCTGCCCGTaGGTCTTCATGTGGCGCGTG +
Preference number: 4 (lower is better)
Translates to: LSVGNGSTVQVRGAGARALPICP*VFMWRV
Trigger: CACGCGCCACATGAAGACGCACGGGCAGATCGGCAA...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCTCCTCCTCCGGCTCGTaGCCCAGCGACGGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGSSSGS*PSDGSL
Trigger: GAGCGACCCGTCGCTGGGCCACGAGCCGGAGGAGGA...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGCGTTCTCGGACGGGATaGGCGCGGCGGGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATRSRTG*ARRAAA
Trigger: AGCTGCCGCCCGCCGCGCTCATCCCGTCCGAGAACG...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGGGGTGCTGTAGACGCTaGAGGGCATCTGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: LSVGNGSTVQVRGAGARAGCCRR*RASGRC
Trigger: ACATCTGCCAGATGCCCTTCAGCGTCTACAGCACCC...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGGTGTTCTGCGCGTGCTaGAGCAGGAACCACGCGCTG +
Preference number: 4 (lower is better)
Translates to: FSRLATVPLYRCGAPGPAVFCAC*SRNHAL
Trigger: CAGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACAC...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCTCGGTCGAAGGCACTaGGGTGCTGGGCGACGAGCC +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGLGRRH*GAGRRA
Trigger: GGCTCGTCGCCCAGCACCCCAGTGCCTTCGACCGAG...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCGGGTCGCTCTCGTGGTaGCGGAAGTCACCGTCGGCC +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGGSLSW*RKSPSA
Trigger: GGCCGACGGTGACTTCCGCCACCACGAGAGCGACCC...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCCCTTCCCAGTTCACCTaGCAGGCTGGCGCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGPSQFT*QAGAGR
Trigger: CCGGCCGGCGCCAGCCTGCCAGGTGAACTGGGAAGG...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR TCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCGACACTGGCCACAGGTaGGCAGGTCAGGGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGDTGHR*AGQGRG
Trigger: GCCCCGACCCTGACCTGCTCACCTGTGGCCAGTGTC...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCCCAGGAAATTCATaGGCGGGGACTGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGARPGNS*AGTAPR
Trigger: CCGTGGCGCAGTCCCCGCTCATGAATTTCCTGGGCG...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCGCCCAGGAAATTCATaGGCGGGGACTGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGRPGNS*AGTAPR
Trigger: CCGTGGCGCAGTCCCCGCTCATGAATTTCCTGGGCG...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTCGTTCTCGGACGGGATaGGCGCGGCGGGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GGGDTEASQVSILSVGNGRSRTG*ARRAAA
Trigger: AGCTGCCGCCCGCCGCGCTCATCCCGTCCGAGAACG...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTGCGGCGTGGAGCTGTTaGCCGCCAGCTCGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: GGGDTEASQVSILSVGNGAAWSC*PPARGA
Trigger: GGCTCCGCGAGCTGGCGGGCAACAGCTCCACGCCGC...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCAAGGCGCCGCGCTTCTaGTTGTCGGCCAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGKAPRF*LSARSS
Trigger: CGAGCTCCTGGCCGACAAGCAGAAGCGCGGCGCCTT...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCACTCGCACGTGTCGCTaGGGCGGCCCTCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGTRTCR*GGPPWS
Trigger: GCTCCAAGGAGGGCCGCCGCAGCGACACGTGCGAGT...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGAGCGGTACACCTCCTTaGCGATCTGCCCGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: FSRLATVPLYRCGAPGPASGTPP*RSARAS
Trigger: AGACGCACGGGCAGATCGGCAAGGAGGTGTACCGCT...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCGTTCCACTGTACAGGTaGGGGGCGCCGGGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSVPLYR*GAPGPA
Trigger: CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAAC...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCGCTGAGTCTGTGGGGTaGCTCCCCCAGCACCACCAC +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGAAESVG*LPQHHH
Trigger: GTGGTGGTGCTGGGGGAGGCACCCCACAGACTCAGC...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTGCGCCTGGGTCGGTaGGGGCGCAGACTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATVRLGR*GRRLGA
Trigger: AGCTCCCAGTCTGCGCCCGCACCGACCCAGGCGCAC...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR CCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCAAGGCACTGGGGTGCTaGGCGACGAGCCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGAKALGC*ATSPIS
Trigger: GGAGATGGGGCTCGTCGCCCAGCACCCCAGTGCCTT...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCAAGGCACTGGGGTGCTaGGCGACGAGCCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGKALGC*ATSPIS
Trigger: GGAGATGGGGCTCGTCGCCCAGCACCCCAGTGCCTT...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGACACGGGCGGCGGCGTaGAGCTGTTGCCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATTRAAA*SCCPPA
Trigger: AGCTGGCGGGCAACAGCTCCACGCCGCCGCCCGTGT...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCGGCCTGAGGTCGGCTaGGTCACCCATGCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGRPEVG*VTHARG
Trigger: GCCTCTAGCATGGGTGACCCAGCCGACCTCAGGCCG...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCTATGGGGGCCACCGCTaGCAGCTGGGCAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGYGGHR*QLGRPA
Trigger: TGCAGGCCTGCCCAGCTGCCAGCGGTGGCCCCCATA...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR TCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGCTCCGAGTCCATGCTaGAGCTCGACTCGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATAPSPC*SSTRAG
Trigger: GCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGC...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGCTCCGAGTCCATGCTaGAGCTCGACTCGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: RGGGDTEASQVSILSVGNAPSPC*SSTRAG
Trigger: GCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGC...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGCGTCTGCTTGGGAAATaGTGGATGACCCCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: LSVGNGSTVQVRGAGARARLLGK*WMTPCS
Trigger: GCTACAAGGGGTCATCCATCATTTCCCAAGCAGACG...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTGCGGAAACCGGCCTaGGGTCGGCTGGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATVRKPA*GRLGHP
Trigger: TGGGTGACCCAGCCGACCTCAGGCCGGTTTCCGCAC...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGACAAGTGCTGCGGGTTaGCCTGTTTGCGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGTSAAG*PVCGGT
Trigger: TGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGT...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGTCCCTCTGGGACAAGTaGTGCGGGTTGCCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: FSRLATVPLYRCGAPGPASLWDK*CGLPCL
Trigger: CAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGA...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCGTGTTCTGCGCGTGCTaGAGCAGGAACCACGCGCTG +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGVFCAC*SRNHAL
Trigger: CAGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACAC...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCCGCCGTTCTCGCGGTTaGGGCTCAGCTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGRRSRG*GSAPSP
Trigger: TGGACTCGGAGCTGAGCCGCAACCGCGAGAACGGCG...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAAGGCGCCGCGCTTCTaGTTGTCGGCCAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGKAPRF*LSARSS
Trigger: CGAGCTCCTGGCCGACAAGCAGAAGCGCGGCGCCTT...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCCCCGGCATCTATTCTaGCATCGCCCGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGAPRHLF*HRPESC
Trigger: GCAGCTCTCCGGGCGATGCCAGAATAGATGCCGGGG...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGGTGATGAGCTCCCTCTaGGACAAGTGCTGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: FSRLATVPLYRCGAPGPAVMSSL*DKCCGL
Trigger: CAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCAC...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGTCTTCTTCGAGGATaGCGGCCTCCACATGGTCAG +
Preference number: 4 (lower is better)
Translates to: FSRLATVPLYRCGAPGPARLLRG*RPPHGQ
Trigger: CTGACCATGTGGAGGCCGCCATCCTCGAAGAAGACG...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGTGGTCCCGCAGGATaGGGCCCGTCATGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGAGGPAG*GPSCAA
Trigger: TGCTGCGCATGACGGGCCCCATCCTGCGGGACCACC...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCTCGCCGAAGCCCGGGTaGTCCCGCAGGATGGGGCCC +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLSPKPG*SRRMGP
Trigger: GGGCCCCATCCTGCGGGACCACCCGGGCTTCGGCGA...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGCTCGGTCGAAGGCACTaGGGTGCTGGGCGACGAGCC +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATLGRRH*GAGRRA
Trigger: GGCTCGTCGCCCAGCACCCCAGTGCCTTCGACCGAG...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCCTCGGTCGAAGGCACTaGGGTGCTGGGCGACGAGCC +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGALGRRH*GAGRRA
Trigger: GGCTCGTCGCCCAGCACCCCAGTGCCTTCGACCGAG...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCTGGCGGGCGAGTCGATaGCCATGGGGTTCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGWRASR*PWGSGA
Trigger: TGCGCCTGAACCCCATGGCCATCGACTCGCCCGCCA...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCTCCTCCTCCGGCTCGTaGCCCAGCGACGGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSSSSGS*PSDGSL
Trigger: GAGCGACCCGTCGCTGGGCCACGAGCCGGAGGAGGA...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCGCCACCGCTGGCAGCTaGGCAGGCCTGCACGGCCCT +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLATAGS*AGLHGP
Trigger: AGGGCCGTGCAGGCCTGCCCAGCTGCCAGCGGTGGC...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR TCA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCGACACTGGCCACAGGTaGGCAGGTCAGGGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRDTGHR*AGQGRG
Trigger: GCCCCGACCCTGACCTGCTCACCTGTGGCCAGTGTC...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCCCATCTCCTCGGCACTaGGGCGGTGCGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSPSPRH*GGAGPG
Trigger: ACCTGGACCCGCACCGCCTCAGTGCCGAGGAGATGG...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTCCATCTCCTCGGCACTaGGGCGGTGCGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GGGDTEASQVSILSVGNGPSPRH*GGAGPG
Trigger: ACCTGGACCCGCACCGCCTCAGTGCCGAGGAGATGG...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCCACCGTCGGCCGCCTTaGGGCCCTCGCCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGHRRPP*GPRPPA
Trigger: AGCTGGCGGGCGAGGGCCTCAAGGCGGCCGACGGTG...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp GGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTCACCGTCGGCCGCCTTaGGGCCCTCGCCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGKSGQHSLGWQRFHCTGHRRPP*GPRPPA
Trigger: AGCTGGCGGGCGAGGGCCTCAAGGCGGCCGACGGTG...ACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCGCTCCGAGTCCATGCTaGAGCTCGACTCGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSAPSPC*SSTRAG
Trigger: GCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGC...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGGAAGGGGTCCTTCATaGAGTGCCGCGACGCCGCGT +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATGRGPS*SAATPR
Trigger: ACGCGGCGTCGCGGCACTTCATGAAGGACCCCTTCC...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCGCGGGTTGCCCTGTTTaGGGCGGGACATTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSAGCPV*GGTLPR
Trigger: CCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGC...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCAAGCCGTGCGTGTTCTaGGCGTGCTGCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGKPCVF*ACCSRN
Trigger: GTTCCTGCTGCAGCACGCGCAGAACACGCACGGCTT...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCTCGGCACTGAGGCGGTaGGGGTCCAGGTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLSALRR*GSRWWR
Trigger: GCGCCACCACCTGGACCCGCACCGCCTCAGTGCCGA...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGTCGAAGGCACTGGGGTaGTGGGCGACGAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATSKALG*WATSPI
Trigger: GATGGGGCTCGTCGCCCAGCACCCCAGTGCCTTCGA...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACTCGAAGGCACTGGGGTaGTGGGCGACGAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: RGGGDTEASQVSILSVGNSKALG*WATSPI
Trigger: GATGGGGCTCGTCGCCCAGCACCCCAGTGCCTTCGA...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGCGGCGTGGAGCTGTTaGCCGCCAGCTCGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGAAAWSC*PPARGA
Trigger: GGCTCCGCGAGCTGGCGGGCAACAGCTCCACGCCGC...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCGGGTTCAGGAGCCGGTaGATAGGGTTGCCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSGFRSR*IGLPRP
Trigger: GGGCCGCGGCAACCCTATGCACCGGCTCCTGAACCC...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCCGCCGTTCTCGCGGTTaGGGCTCAGCTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGARRSRG*GSAPSP
Trigger: TGGACTCGGAGCTGAGCCGCAACCGCGAGAACGGCG...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCAGGAGCTCGCCGTACTaGGGCAGTGCGCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRRSSPY*GSAPRP
Trigger: GGGCCTAGGCGCACTGCCGCAGTACGGCGAGCTCCT...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCGAAGGGCGACTGTCGTaGGTCCGTGAAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGEGRLS*VREAQE
Trigger: TTCCTGGGCTTCACGGACGCACGACAGTCGCCCTTC...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGGTTCCACTGTACAGGTaGGGGGCGCCGGGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGVPLYR*GAPGPA
Trigger: CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAAC...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGTGGCGGGCGAGTCGATaGCCATGGGGTTCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATWRASR*PWGSGA
Trigger: TGCGCCTGAACCCCATGGCCATCGACTCGCCCGCCA...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCACACGGGCGGCGGCGTaGAGCTGTTGCCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLTRAAA*SCCPPA
Trigger: AGCTGGCGGGCAACAGCTCCACGCCGCCGCCCGTGT...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGACTTGGGGCTGGGCTaGAAGGGGTTCAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATDLGLG*KGFRSR
Trigger: CCGGCTCCTGAACCCCTTCCAGCCCAGCCCCAAGTC...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGACGGGTCGCTCTCGTaGTGGCGGAAGTCACCGTCG +
Preference number: 4 (lower is better)
Translates to: RGGGDTEASQVSILSVGNDGSLS*WRKSPS
Trigger: CGACGGTGACTTCCGCCACCACGAGAGCGACCCGTC...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGGCAGGTCACTTCACCTaGACCCAGCTGAATCACCAG +
Preference number: 4 (lower is better)
Translates to: FSRLATVPLYRCGAPGPAAGHFT*TQLNHQ
Trigger: CTGGTGATTCAGCTGGGTCCAGGTGAAGTGACCTGC...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGGCTTGTGCTTTGGGATaGCTTAGTCCTGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: LSVGNGSTVQVRGAGARAACALG*LSPGNL
Trigger: CAGATTGCCAGGACTAAGCCATCCCAAAGCACAAGC...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCCCTGAGCTCGGAGCGTaGGGAGGGTGGCGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAAPELGA*GGWRAV
Trigger: GACAGCCCGCCACCCTCCTCACGCTCCGAGCTCAGG...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCCGTTCTCGGACGGGATaGGCGCGGCGGGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGRSRTG*ARRAAA
Trigger: AGCTGCCGCCCGCCGCGCTCATCCCGTCCGAGAACG...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACACTGTCGTGCGTCCGTaGAGCCCAGGAAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RGGGDTEASQVSILSVGNTVVRP*SPGRGP
Trigger: AGGACCCCTTCCTGGGCTTCACGGACGCACGACAGT...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCGCGCTGGGCACCTTCTaGTGGAACTCATCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGALGTF*WNSSPA
Trigger: AGCAGGGGATGAGTTCCATCAGAAGGTGCCCAGCGC...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCTTTGCGGCGGGACATTaGCCCGGCATCTATTCTGGC +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGFAAGH*PGIYSG
Trigger: GCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAA...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCTGCGTGTTCTGCGCGTaGTGCAGCAGGAACCACGCG +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGACVFCA*CSRNHA
Trigger: CGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCA...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGTTCATGAGCGGGGACTaGGCCACGGCCTCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGAFMSGD*ATASGP
Trigger: CGGGCCGGAGGCCGTGGCGCAGTCCCCGCTCATGAA...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCGAAGGCACTGGGGTaGTGGGCGACGAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: GGGDTEASQVSILSVGNGSKALG*WATSPI
Trigger: GATGGGGCTCGTCGCCCAGCACCCCAGTGCCTTCGA...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCAGCGAGCCGGCCTTGTaGATGTGCGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGSEPAL*MCVFMW
Trigger: CCACATGAAGACGCACATGCACAAGGCCGGCTCGCT...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCCGCCGTTCTCGCGGTTaGGGCTCAGCTCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSRRSRG*GSAPSP
Trigger: TGGACTCGGAGCTGAGCCGCAACCGCGAGAACGGCG...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCAAGGCGCCGCGCTTCTaGTTGTCGGCCAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRKAPRF*LSARSS
Trigger: CGAGCTCCTGGCCGACAAGCAGAAGCGCGGCGCCTT...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCGCGCGCACGCGTAGTTaGACAGCTCGCACTTGTAAG +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGAARTRS*TARTCK
Trigger: CTTACAAGTGCGAGCTGTGCAACTACGCGTGCGCGC...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCGCGCGCACGCGTAGTTaGACAGCTCGCACTTGTAAG +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGARTRS*TARTCK
Trigger: CTTACAAGTGCGAGCTGTGCAACTACGCGTGCGCGC...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGCACAGAGACACACAATaGTTGTGCTTTGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LSVGNGSTVQVRGAGARAHRDTQ*LCFGMA
Trigger: AGCCATCCCAAAGCACAAGCATTGTGTGTCTCTGTG...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCGTGATGAGCTCCCTCTaGGACAAGTGCTGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGVMSSL*DKCCGL
Trigger: CAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCAC...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCGCCGCGAGAAGTCCATaGCGGGCGAGTCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSAARSP*RASRWP
Trigger: TGGCCATCGACTCGCCCGCCATGGACTTCTCGCGGC...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCAGTGCTCGGACGACGTaGCGAAGGGCGACTGTCGTG +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGASARTT*RRATVV
Trigger: CACGACAGTCGCCCTTCGCCACGTCGTCCGAGCACT...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCCATCTGGTCTGCTGTaGCCACACCAAGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGAPSGLL*PHQGAL
Trigger: CAAGGCTCCTTGGTGTGGCCACAGCAGACCAGATGG...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCCTCGCCCAGTGCGCCTaGGTCGGTGCGGGCGCAGAC +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCLAQCA*VGAGAD
Trigger: GTCTGCGCCCGCACCGACCCAGGCGCACTGGGCGAG...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR TCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCGCTCGGACACTTTCCTaGGCTCGGAGCGTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSARTLS*ARSVRR
Trigger: CCTCCTCACGCTCCGAGCTCAGGAAAGTGTCCGAGC...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCCATCTTCGTCGGGGGTaGCTTGGATCCCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGHLRRG*LGSRSP
Trigger: TGGAGATCGGGATCCAAGTCACCCCCGACGAAGATG...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCGCCCAGGAAATTCATaGGCGGGGACTGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLRPGNS*AGTAPR
Trigger: CCGTGGCGCAGTCCCCGCTCATGAATTTCCTGGGCG...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCTGGGGTTCAGGCGCATaGCTCGGTCGAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRWGSGA*LGRRHW
Trigger: CCAGTGCCTTCGACCGAGTCATGCGCCTGAACCCCA...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCGTGCGGAAACCGGCCTaGGGTCGGCTGGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTVRKPA*GRLGHP
Trigger: TGGGTGACCCAGCCGACCTCAGGCCGGTTTCCGCAC...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGGCGCTGTTGAAGGGCTaGTTGCATGTTGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: FSRLATVPLYRCGAPGPAALLKG*LHVVQM
Trigger: CATTTGCACAACATGCAAGCAGCCCTTCAACAGCGC...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGAAGCCGTGCGTGTTCTaGGCGTGCTGCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATKPCVF*ACCSRN
Trigger: GTTCCTGCTGCAGCACGCGCAGAACACGCACGGCTT...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTTTCATGAGCGGGGACTaGGCCACGGCCTCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: GGKSGQHSLGWQRFHCTGFMSGD*ATASGP
Trigger: CGGGCCGGAGGCCGTGGCGCAGTCCCCGCTCATGAA...ACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCCGTTCTCGGACGAGTaGTCGGACGACGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRPFSDE*SDDVAK
Trigger: CTTCGCCACGTCGTCCGAGCACTCGTCCGAGAACGG...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGACTCGCACGTGTCGCTaGGGCGGCCCTCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGTRTCR*GGPPWS
Trigger: GCTCCAAGGAGGGCCGCCGCAGCGACACGTGCGAGT...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCGTGTGGCTCCGCCGGTaGACCGTCAAGTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSVWLRR*TVKLLQ
Trigger: CTGCAGCAACTTGACGGTGCACCGGCGGAGCCACAC...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCCCCCGGCATCTATTCTaGCATCGCCCGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSPRHLF*HRPESC
Trigger: GCAGCTCTCCGGGCGATGCCAGAATAGATGCCGGGG...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGTGGTCCCGCAGGATaGGGCCCGTCATGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGAGGPAG*GPSCAA
Trigger: TGCTGCGCATGACGGGCCCCATCCTGCGGGACCACC...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCTGGCGGGCGAGTCGATaGCCATGGGGTTCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLWRASR*PWGSGA
Trigger: TGCGCCTGAACCCCATGGCCATCGACTCGCCCGCCA...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTACACGGGCGGCGGCGTaGAGCTGTTGCCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGKSGQHSLGWQRFHCTGTRAAA*SCCPPA
Trigger: AGCTGGCGGGCAACAGCTCCACGCCGCCGCCCGTGT...ACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCGACGGGTCGCTCTCGTaGTGGCGGAAGTCACCGTCG +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLDGSLS*WRKSPS
Trigger: CGACGGTGACTTCCGCCACCACGAGAGCGACCCGTC...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCACAGGAAGACCACCCTaGAGGCACTCTAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGATGRPP*RHSRTS
Trigger: TGAGGTCCTAGAGTGCCTCCAGGGTGGTCTTCCTGT...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCCTCTAATGCCAAGTaGCAGGTTCCAATTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGPSNAK*QVPIGG
Trigger: GCCCCCAATTGGAACCTGCCACTTGGCATTAGAGGG...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CAA 72 bp GTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTaGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: VTRRQVRSAFSR*ATVPLYRCGAP
Trigger: CGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGGAACCACGCGCTGTTaGAGGGCTGCTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATGTTRC*RAACML
Trigger: CAACATGCAAGCAGCCCTTCAACAGCGCGTGGTTCC...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCTCATGCGCAGCAGGTTaGAGGGGTTGCTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSSCAAG*RGCCRP
Trigger: TGGGCGACAGCAACCCCTTCAACCTGCTGCGCATGA...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCATGCGCAGCAGGTTaGAGGGGTTGCTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GGGDTEASQVSILSVGNGSCAAG*RGCCRP
Trigger: TGGGCGACAGCAACCCCTTCAACCTGCTGCGCATGA...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGCACCGTCGGCCGCCTTaGGGCCCTCGCCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLHRRPP*GPRPPA
Trigger: AGCTGGCGGGCGAGGGCCTCAAGGCGGCCGACGGTG...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCGGAAGGGGTCCTTCATaGAGTGCCGCGACGCCGCGT +
Preference number: 4 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTGRGPS*SAATPR
Trigger: ACGCGGCGTCGCGGCACTTCATGAAGGACCCCTTCC...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCGTCTGCTTGGGAAATaGTGGATGACCCCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGRLLGK*WMTPCS
Trigger: GCTACAAGGGGTCATCCATCATTTCCCAAGCAGACG...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGAGGCTCATCTTTACCTaGCAACTGACACTGGCATCC +
Preference number: 4 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGRLIFT*QLTLAS
Trigger: GGATGCCAGTGTCAGTTGTCAGGTAAAGATGAGCCT...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR GCA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCACAAGTGCTGCGGGTTaGCCTGTTTGCGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRTSAAG*PVCGGT
Trigger: TGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGT...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCCTCTGGGACAAGTGCTaGGGGTTGCCCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSLWDKC*GLPCLR
Trigger: CCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAG...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGAAGCTGCCGCCACACTaGTTCCTTTTGTGCTCTATA +
Preference number: 4 (lower is better)
Translates to: FSRLATVPLYRCGAPGPAKLPPH*FLLCSI
Trigger: TATAGAGCACAAAAGGAAGCAGTGTGGCGGCAGCTT...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGGCTGCTTGCATGTTGTaGAAATGTAGCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: FSRLATVPLYRCGAPGPAAACML*KCSWKA
Trigger: AGCCTTCCAGCTACATTTGCACAACATGCAAGCAGC...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTAAGCCGTGCGTGTTCTaGGCGTGCTGCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GGGDTEASQVSILSVGNGKPCVF*ACCSRN
Trigger: GTTCCTGCTGCAGCACGCGCAGAACACGCACGGCTT...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTAGGAGCTCGCCGTACTaGGGCAGTGCGCCTAGGCCC +
Preference number: 4 (lower is better)
Translates to: GGKSGQHSLGWQRFHCTGRSSPY*GSAPRP
Trigger: GGGCCTAGGCGCACTGCCGCAGTACGGCGAGCTCCT...ACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCACCTCCTTGCCGATCTaGCCGTGCGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGATSLPI*PCVFMW
Trigger: CCACATGAAGACGCACGGGCAGATCGGCAAGGAGGT...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCAGCGGTACACCTCCTTaGCGATCTGCCCGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSSGTPP*RSARAS
Trigger: AGACGCACGGGCAGATCGGCAAGGAGGTGTACCGCT...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGTTGCTTGCGAGTCATTaGTCAGGCTACTACCGGGTT +
Preference number: 4 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGLLASH*SGYYRV
Trigger: AACCCGGTAGTAGCCTGAGCAATGACTCGCAAGCAA...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGCCAAAATCACGGGTTTaGCTGTGTTCCACGAGACCT +
Preference number: 4 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGPKSRV*LCSTRP
Trigger: AGGTCTCGTGGAACACAGGCAAACCCGTGATTTTGG...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCCACATGGTCAGCCTCTaGGGTGATGAGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGAHMVSL*GDELPL
Trigger: CAGAGGGAGCTCATCACCCCAGAGGCTGACCATGTG...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGTGGTCCCGCAGGATaGGGCCCGTCATGCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCGGPAG*GPSCAA
Trigger: TGCTGCGCATGACGGGCCCCATCCTGCGGGACCACC...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCACGCTGAAGGGCATCTaGCAGATGTCGCAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGATLKGI*QMSQRY
Trigger: GTACCGCTGCGACATCTGCCAGATGCCCTTCAGCGT...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACACGCTGAAGGGCATCTaGCAGATGTCGCAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: RGGGDTEASQVSILSVGNTLKGI*QMSQRY
Trigger: GTACCGCTGCGACATCTGCCAGATGCCCTTCAGCGT...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCCGGCCTGAGGTCGGCTaGGTCACCCATGCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTRPEVG*VTHARG
Trigger: GCCTCTAGCATGGGTGACCCAGCCGACCTCAGGCCG...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCCGGTTCGGTTGTTTCTaGGTTTTCTGCGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGRFGCF*VFCGLP
Trigger: AGGCAGCCCGCAGAAAACCCAGAAACAACCGAACCG...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR TCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCGGAACCACGCGCTGTTaGAGGGCTGCTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSGTTRC*RAACML
Trigger: CAACATGCAAGCAGCCCTTCAACAGCGCGTGGTTCC...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCTCATGCGCAGCAGGTTaGAGGGGTTGCTGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLSCAAG*RGCCRP
Trigger: TGGGCGACAGCAACCCCTTCAACCTGCTGCGCATGA...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGTGGGGTTCAGGCGCATaGCTCGGTCGAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGAWGSGA*LGRRHW
Trigger: CCAGTGCCTTCGACCGAGTCATGCGCCTGAACCCCA...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCGGAAGGGGTCCTTCATaGAGTGCCGCGACGCCGCGT +
Preference number: 4 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGGRGPS*SAATPR
Trigger: ACGCGGCGTCGCGGCACTTCATGAAGGACCCCTTCC...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGACTGTCGTGCGTCCGTaGAGCCCAGGAAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGATVVRP*SPGRGP
Trigger: AGGACCCCTTCCTGGGCTTCACGGACGCACGACAGT...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp GGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTTATCTCTGGCGGCGCTaGGTCTGTGGGGTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GGKSGQHSLGWQRFHCTGYLWRR*VCGVPP
Trigger: GGGAGGCACCCCACAGACTCAGCGCCGCCAGAGATA...ACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGGCACTCACATCAAATTaGATGGCAGTAGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: LSVGNGSTVQVRGAGARAALTSN*MAVEKL
Trigger: CAGTTTTTCTACTGCCATTCAATTTGATGTGAGTGC...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCACACCAAGGAGCCTTaGTGCAAGGTTCGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRHTKEP*CKVRGV
Trigger: AACGCCCCGAACCTTGCATCAAGGCTCCTTGGTGTG...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCTCTGGGACAAGTGCTaGGGGTTGCCCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLLWDKC*GLPCLR
Trigger: CCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAG...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACCCTGCTTGGGACAGATaGCTTTCGTGGGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: RGGGDTEASQVSILSVGNPAWDR*LSWVRA
Trigger: TGCTCTCACCCACGAAAGGCATCTGTCCCAAGCAGG...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGGTGTGGCTCCGCCGGTaGACCGTCAAGTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGVWLRR*TVKLLQ
Trigger: CTGCAGCAACTTGACGGTGCACCGGCGGAGCCACAC...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCTCGTTAGTCAGCAAGTaGTCGCCGTGCCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGASLVSK*SPCHFF
Trigger: GAAAAAGTGGCACGGCGAGCACTTGCTGACTAACGA...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCGCTGAGTCTGTGGGGTaGCTCCCCCAGCACCACCAC +
Preference number: 4 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGAESVG*LPQHHH
Trigger: GTGGTGGTGCTGGGGGAGGCACCCCACAGACTCAGC...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCTGGGAGCTATAGATTaGAACGTGAAGATGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGALGAID*NVKMAE
Trigger: CTCCGCCATCTTCACGTTGCAATCTATAGCTCCCAG...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR CCA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGTCTTCTTCGAGGATaGCGGCCTCCACATGGTCAG +
Preference number: 4 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRRLLRG*RPPHGQ
Trigger: CTGACCATGTGGAGGCCGCCATCCTCGAAGAAGACG...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCGTCGGGGGTGACTTaGATCCCGATCTCCACCGGC +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAASSGVT*IPISTG
Trigger: GCCGGTGGAGATCGGGATCCAAGTCACCCCCGACGA...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCAAGGCACTGGGGTGCTaGGCGACGAGCCCCATCTCC +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCKALGC*ATSPIS
Trigger: GGAGATGGGGCTCGTCGCCCAGCACCCCAGTGCCTT...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCCGCGAGAAGTCCATaGCGGGCGAGTCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: GGKSGQHSLGWQRFHCTGAARSP*RASRWP
Trigger: TGGCCATCGACTCGCCCGCCATGGACTTCTCGCGGC...ACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCAGCATTCTCTCGGTTaGCAACGGTTCCACTGTACA +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGAQHSLG*QRFHCT
Trigger: TGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCAGCATTCTCTCGGTTaGCAACGGTTCCACTGTACA +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGQHSLG*QRFHCT
Trigger: TGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCGGCCAACACTCTCCATaGCACGAAAGGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSGQHSP*HERSWL
Trigger: CAGCCAGGACCTTTCGTGCCATGGAGAGTGTTGGCC...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACCCCTCTAATGCCAAGTaGCAGGTTCCAATTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RGGGDTEASQVSILSVGNPSNAK*QVPIGG
Trigger: GCCCCCAATTGGAACCTGCCACTTGGCATTAGAGGG...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCTGGGGTTCAGGCGCATaGCTCGGTCGAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGWGSGA*LGRRHW
Trigger: CCAGTGCCTTCGACCGAGTCATGCGCCTGAACCCCA...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCACTGTCGTGCGTCCGTaGAGCCCAGGAAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCTVVRP*SPGRGP
Trigger: AGGACCCCTTCCTGGGCTTCACGGACGCACGACAGT...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCAATTGGGGGCAACTTTaGACAAAGTTGTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGNWGQL*TKLWQC
Trigger: GCACTGCCACAACTTTGTTCAAAGTTGCCCCCAATT...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCACAAGTGCTGCGGGTTaGCCTGTTTGCGGCGGGACA +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAATSAAG*PVCGGT
Trigger: TGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGT...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCCTCTGGGACAAGTGCTaGGGGTTGCCCTGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAALWDKC*GLPCLR
Trigger: CCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAG...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCCTGCTTGGGACAGATaGCTTTCGTGGGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRPAWDR*LSWVRA
Trigger: TGCTCTCACCCACGAAAGGCATCTGTCCCAAGCAGG...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCGCGCTGTTGAAGGGCTaGTTGCATGTTGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGALLKG*LHVVQM
Trigger: CATTTGCACAACATGCAAGCAGCCCTTCAACAGCGC...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCCGGGCTCCAGGTAGATaGGGAAGCCGTGCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAARAPGR*GSRACS
Trigger: AGAACACGCACGGCTTCCGCATCTACCTGGAGCCCG...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCCGGGCTCCAGGTAGATaGGGAAGCCGTGCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTRAPGR*GSRACS
Trigger: AGAACACGCACGGCTTCCGCATCTACCTGGAGCCCG...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGGGCTCCAGGTAGATaGGGAAGCCGTGCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGRAPGR*GSRACS
Trigger: AGAACACGCACGGCTTCCGCATCTACCTGGAGCCCG...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAATCGGCACTGAGGCGGTaGGGGTCCAGGTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHESALRR*GSRWWR
Trigger: GCGCCACCACCTGGACCCGCACCGCCTCAGTGCCGA...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCGAAGGGCGACTGTCGTaGGTCCGTGAAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAAEGRLS*VREAQE
Trigger: TTCCTGGGCTTCACGGACGCACGACAGTCGCCCTTC...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCGTGTGGCTCCGCCGGTaGACCGTCAAGTTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGVWLRR*TVKLLQ
Trigger: CTGCAGCAACTTGACGGTGCACCGGCGGAGCCACAC...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCACCTCCTTGCCGATCTaGCCGTGCGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLTSLPI*PCVFMW
Trigger: CCACATGAAGACGCACGGGCAGATCGGCAAGGAGGT...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCTCGTCGGGGGTGACTTaGATCCCGATCTCCACCGGC +
Preference number: 4 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGSSGVT*IPISTG
Trigger: GCCGGTGGAGATCGGGATCCAAGTCACCCCCGACGA...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAATCCTCCTCCGGCTCGTaGCCCAGCGACGGGTCGCTC +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHESSSGS*PSDGSL
Trigger: GAGCGACCCGTCGCTGGGCCACGAGCCGGAGGAGGA...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCAGTGCTCGGACGACGTaGCGAAGGGCGACTGTCGTG +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCSARTT*RRATVV
Trigger: CACGACAGTCGCCCTTCGCCACGTCGTCCGAGCACT...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGAGACACAGGTTAGGTTaGAGTGCCGCCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGARHRLG*SAASPG
Trigger: CCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCT...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGAGACACAGGTTAGGTTaGAGTGCCGCCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGRHRLG*SAASPG
Trigger: CCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCT...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCGCAGGTCACTTCACCTaGACCCAGCTGAATCACCAG +
Preference number: 4 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRAGHFT*TQLNHQ
Trigger: CTGGTGATTCAGCTGGGTCCAGGTGAAGTGACCTGC...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGGGAACCACGCGCTGTTaGAGGGCTGCTTGCATGTTG +
Preference number: 4 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGGTTRC*RAACML
Trigger: CAACATGCAAGCAGCCCTTCAACAGCGCGTGGTTCC...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGCCATCTCCTCGGCACTaGGGCGGTGCGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLPSPRH*GGAGPG
Trigger: ACCTGGACCCGCACCGCCTCAGTGCCGAGGAGATGG...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGAGTTGCTGCAGTTCTTaGACACCTTGCCGCAGTACT +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATSCCSS*TPCRST
Trigger: AGTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACT...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACAGTTGCTGCAGTTCTTaGACACCTTGCCGCAGTACT +
Preference number: 4 (lower is better)
Translates to: RGGGDTEASQVSILSVGNSCCSS*TPCRST
Trigger: AGTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACT...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR TCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCGGGTGCTGTAGACGCTaGAGGGCATCTGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTGCCRR*RASGRC
Trigger: ACATCTGCCAGATGCCCTTCAGCGTCTACAGCACCC...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGCAAAGTGCTACGACTTaGAAGATTGTTATCCGCTGT +
Preference number: 4 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGQSATT*KIVIRC
Trigger: ACAGCGGATAACAATCTTTCAAGTCGTAGCACTTTG...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGCGCTGGGCACCTTCTaGTGGAACTCATCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCALGTF*WNSSPA
Trigger: AGCAGGGGATGAGTTCCATCAGAAGGTGCCCAGCGC...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCGAACAAGCGTACAAATaGAATGGCAGACACATGCTG +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGEQAYK*NGRHML
Trigger: CAGCATGTGTCTGCCATTTCATTTGTACGCTTGTTC...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTTTGCGGCGGGACATTaGCCCGGCATCTATTCTGGC +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAAFAAGH*PGIYSG
Trigger: GCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAA...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGGCGGGTTGCCCTGTTTaGGGCGGGACATTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQAGCPV*GGTLPR
Trigger: CCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGC...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGTCCCTCTGGGACAAGTaGTGCGGGTTGCCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGASLWDK*CGLPCL
Trigger: CAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGA...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp TCAGAGAGAAGCCCAACACGAACGGTTCTCTGTGTAGGCCAATTCCGACAAAAATTCATGAGCGGGGACTaGGCCACGGCCTCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: SERSPTRTVLCVGQFRQKFMSGD*ATASGP
Trigger: CGGGCCGGAGGCCGTGGCGCAGTCCCCGCTCATGAA...TTTTTGTCGGAATTGGCCTACACAGAGAACCGTTCGTGTTGGGCTTCTCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGGGTTCAGGAGCCGGTaGATAGGGTTGCCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLGFRSR*IGLPRP
Trigger: GGGCCGCGGCAACCCTATGCACCGGCTCCTGAACCC...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGAGCGAGCCGGCCTTGTaGATGTGCGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGASEPAL*MCVFMW
Trigger: CCACATGAAGACGCACATGCACAAGGCCGGCTCGCT...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGAAGGGCGACTGTCGTaGGTCCGTGAAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCEGRLS*VREAQE
Trigger: TTCCTGGGCTTCACGGACGCACGACAGTCGCCCTTC...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGACTCGCACGTGTCGCTaGGGCGGCCCTCCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQTRTCR*GGPPWS
Trigger: GCTCCAAGGAGGGCCGCCGCAGCGACACGTGCGAGT...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCTGCACAACCTCAGAATaGTGTCGGGCCATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSCTTSE*CRAISQ
Trigger: CTGGGAAATGGCCCGACAGCATTCTGAGGTTGTGCA...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGTCTTGTTTTGTAAAATaGCCAGGCATTCTCGATTAT +
Preference number: 4 (lower is better)
Translates to: LSVGNGSTVQVRGAGARASCFVK*PGILDY
Trigger: ATAATCGAGAATGCCTGGGCATTTTACAAAACAAGA...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGCAGCTCAGTTTGCATTaGTTTCTGCTGGTAAGGGCG +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATQLSLH*FLLVRA
Trigger: CGCCCTTACCAGCAGAAAGCAATGCAAACTGAGCTG...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCGACAGATGCCTTTCGTaGGTGAGAGCAGGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSDRCLS*VRAGGH
Trigger: ATGACCACCTGCTCTCACCCACGAAAGGCATCTGTC...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCAGACACAGGTTAGGTTaGAGTGCCGCCTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGRHRLG*SAASPG
Trigger: CCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCT...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGTACACGCGGCCACTGTaGCATTTTTGTATAACCTAT +
Preference number: 4 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGYTRPL*HFCITY
Trigger: ATAGGTTATACAAAAATGCCACAGTGGCCGCGTGTA...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGGGCCAACACTCTCCATaGCACGAAAGGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGGQHSP*HERSWL
Trigger: CAGCCAGGACCTTTCGTGCCATGGAGAGTGTTGGCC...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGGGAGGAGGCAGCTATaGGGGCCACCGCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLGRRQL*GPPLAA
Trigger: AGCTGCCAGCGGTGGCCCCCATAGCTGCCTCCTCCC...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR TCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCAAAGTGCTACGACTTaGAAGATTGTTATCCGCTGT +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGQSATT*KIVIRC
Trigger: ACAGCGGATAACAATCTTTCAAGTCGTAGCACTTTG...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCTCTCTCCTCTACATCTaGCATCTTAGAGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGASLLYI*HLRDGL
Trigger: GAGGCCATCTCTAAGATGTCAGATGTAGAGGAGAGA...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCTCACCTGGACCCAGCTaGATCACCAGCTCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRSPGPS*ITSSFY
Trigger: ATAAAAGGAGCTGGTGATTCAGCTGGGTCCAGGTGA...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCACCTGGACCCAGCTaGATCACCAGCTCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: GGGDTEASQVSILSVGNGSPGPS*ITSSFY
Trigger: ATAAAAGGAGCTGGTGATTCAGCTGGGTCCAGGTGA...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCCTCGCATTCGGAAACTaGCGGAATGTAGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGALAFGN*RNVGFR
Trigger: TCTGAAACCTACATTCCGTCAGTTTCCGAATGCGAG...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACCTCGCATTCGGAAACTaGCGGAATGTAGGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RGGGDTEASQVSILSVGNLAFGN*RNVGFR
Trigger: TCTGAAACCTACATTCCGTCAGTTTCCGAATGCGAG...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGAGGCTCATCTTTACCTaGAATGTTCTCCTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATRLIFT*NVLLLG
Trigger: CCCAAGCAGGAGAACATTGCAGGTAAAGATGAGCCT...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000345514.2
CDS-3UTR GCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGCTGCTTGCATGTTGTaGAAATGTAGCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATAACML*KCSWKA
Trigger: AGCCTTCCAGCTACATTTGCACAACATGCAAGCAGC...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGCGCGCACGCGTAGTTaGACAGCTCGCACTTGTAAG +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCARTRS*TARTCK
Trigger: CTTACAAGTGCGAGCTGTGCAACTACGCGTGCGCGC...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCTCGTTAGTCAGCAAGTaGTCGCCGTGCCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSSLVSK*SPCHFF
Trigger: GAAAAAGTGGCACGGCGAGCACTTGCTGACTAACGA...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCCTCCACAATTTGTACTaGCTTAATCAACCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGLHNLY*LNQPSG
Trigger: ACCCGAGGGTTGATTAAGGCAGTACAAATTGTGGAG...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGCCCTCTAACATTGCTTaGGAGTCATTGCTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATPSNIA*ESLLRL
Trigger: TAGCCTGAGCAATGACTCGCAAGCAATGTTAGAGGG...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGTCGGGACGACATGAGTaGTACATCTCCATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATSGRHE*YISIPV
Trigger: AACTGGAATGGAGATGTAGCACTCATGTCGTCCCGA...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCTCCTTTCTGTGTCACTaGAGGCCACCCCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCSFLCH*RPPHLP
Trigger: GGGGAGATGGGGTGGCCTGCAGTGACACAGAAAGGA...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCACAAAGTTGTGGCAGTaGGGAAACCGGCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTTKLWQ*GNRPEV
Trigger: GACCTCAGGCCGGTTTCCGCACTGCCACAACTTTGT...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGACAAAGTTGTGGCAGTaGGGAAACCGGCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGTKLWQ*GNRPEV
Trigger: GACCTCAGGCCGGTTTCCGCACTGCCACAACTTTGT...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGGCCGCGAGAAGTCCATaGCGGGCGAGTCGATGGCCA +
Preference number: 4 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLAARSP*RASRWP
Trigger: TGGCCATCGACTCGCCCGCCATGGACTTCTCGCGGC...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGACTTGGGGCTGGGCTaGAAGGGGTTCAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLDLGLG*KGFRSR
Trigger: CCGGCTCCTGAACCCCTTCCAGCCCAGCCCCAAGTC...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGACGATGAGATTGCTCTaGAACTTGAAGGTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATTMRLL*NLKVLP
Trigger: CGGCAAGACCTTCAAGTTCCAGAGCAATCTCATCGT...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGACGGGTCGCTCTCGTaGTGGCGGAAGTCACCGTCG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLDGSLS*WRKSPS
Trigger: CGACGGTGACTTCCGCCACCACGAGAGCGACCCGTC...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTATGGAGGATGAAGGATaGAGAGGAAACGCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: GGGDTEASQVSILSVGNGMEDEG*RGNAGE
Trigger: TTCCCCTGCGTTTCCTCTCCATCCTTCATCCTCCAT...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGGCCCAAAAGGATGCTTaGTTATACTTTCATAACCTG +
Preference number: 4 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGAQKDA*LYFHNL
Trigger: CAGGTTATGAAAGTATAACCAAGCATCCTTTTGGGC...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCACTGCTTCCTTTTGTaGTCTATAAAAACCAGGATG +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGAHCFLL*SIKTRM
Trigger: CATCCTGGTTTTTATAGAGCACAAAAGGAAGCAGTG...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCACTGCTTCCTTTTGTaGTCTATAAAAACCAGGATG +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGHCFLL*SIKTRM
Trigger: CATCCTGGTTTTTATAGAGCACAAAAGGAAGCAGTG...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCGCGCTGTTGAAGGGCTaGTTGCATGTTGTGCAAATG +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLALLKG*LHVVQM
Trigger: CATTTGCACAACATGCAAGCAGCCCTTCAACAGCGC...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGCCGTTCTCGGACGAGTaGTCGGACGACGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLPFSDE*SDDVAK
Trigger: CTTCGCCACGTCGTCCGAGCACTCGTCCGAGAACGG...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGGTTCCACTGTACAGGTaGGGGGCGCCGGGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: KSASNRKASAFGKELPKRVPLYR*GAPGPA
Trigger: CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAAC...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCCTCCACAATTTGTACTaGCTTAATCAACCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGALHNLY*LNQPSG
Trigger: ACCCGAGGGTTGATTAAGGCAGTACAAATTGTGGAG...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGGCAGCTGGGCAGGCCTaGACGGCCCTGCAATGTTCT +
Preference number: 4 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQAAGQA*TALQCS
Trigger: AGAACATTGCAGGGCCGTGCAGGCCTGCCCAGCTGC...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR CCA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGCCCCGGCATCTATTCTaGCATCGCCCGGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLPRHLF*HRPESC
Trigger: GCAGCTCTCCGGGCGATGCCAGAATAGATGCCGGGG...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCGCCCAAAAGGATGCTTaGTTATACTTTCATAACCTG +
Preference number: 4 (lower is better)
Translates to: SILSVGNGSTVQVRGAGAAQKDA*LYFHNL
Trigger: CAGGTTATGAAAGTATAACCAAGCATCCTTTTGGGC...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCACTCTAGGACCTCAGTaGGGCATCCAAAGGCAACAG +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAATLGPQ*GIQRQQ
Trigger: CTGTTGCCTTTGGATGCCCCACTGAGGTCCTAGAGT...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCACAGGAAGACCACCCTaGAGGCACTCTAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCTGRPP*RHSRTS
Trigger: TGAGGTCCTAGAGTGCCTCCAGGGTGGTCTTCCTGT...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCTTGCTTTCCGCGGACTaGCTGGTTTCTTTAAAAATA +
Preference number: 4 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGLLSAD*LVSLKI
Trigger: TATTTTTAAAGAAACCAGCCAGTCCGCGGAAAGCAA...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR CCA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACTTGTGCAAATGTAGCTaGAAGGCTCATCTTTACGGG +
Preference number: 4 (lower is better)
Translates to: RGGGDTEASQVSILSVGNLCKCS*KAHLYG
Trigger: CCCGTAAAGATGAGCCTTCCAGCTACATTTGCACAA...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443726.2
CDS-3UTR TCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCAGTTGCTGCAGTTCTTaGACACCTTGCCGCAGTACT +
Preference number: 4 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTSCCSS*TPCRST
Trigger: AGTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACT...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCATAGTGCCAGTATTGTaGATGCCACGCTTAGCAATA +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGAIVPVL*MPRLAI
Trigger: TATTGCTAAGCGTGGCATTCACAATACTGGCACTAT...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCTCTCTCCTCTACATCTaGCATCTTAGAGATGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLSLLYI*HLRDGL
Trigger: GAGGCCATCTCTAAGATGTCAGATGTAGAGGAGAGA...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGAAAGGTCCTGGCTGTaGTGGAGTCTCCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCERSWL*WSLLPE
Trigger: TTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTC...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp GGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGAAAGGTCCTGGCTGTaGTGGAGTCTCCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GGKSGQHSLGWQRFHCTGERSWL*WSLLPE
Trigger: TTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTC...ACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCAATTGGGGGCAACTTTaGACAAAGTTGTGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLNWGQL*TKLWQC
Trigger: GCACTGCCACAACTTTGTTCAAAGTTGCCCCCAATT...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGCACGAGACCTTCGGCTaGCGGTTACTTAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLHETFG*RLLRTG
Trigger: CCCGGTCCTAAGTAACCGTCAGCCGAAGGTCTCGTG...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGGTGATCACGGATGAGTaGGGGTGGGAGGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQVITDE*GWEEAA
Trigger: AGCTGCCTCCTCCCACCCTCACTCATCCGTGATCAC...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR GCA 90 bp TCAGAGAGAAGCCCAACACGAACGGTTCTCTGTGTAGGCCAATTCCGACAAAAATGCGTGTTCTGCGCGTaGTGCAGCAGGAACCACGCG +
Preference number: 4 (lower is better)
Translates to: SERSPTRTVLCVGQFRQKCVFCA*CSRNHA
Trigger: CGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCA...TTTTTGTCGGAATTGGCCTACACAGAGAACCGTTCGTGTTGGGCTTCTCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGTTGCCGATCTGCCCGTaGGTCTTCATGTGGCGCGTG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLLPICP*VFMWRV
Trigger: CACGCGCCACATGAAGACGCACGGGCAGATCGGCAA...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGTTGCCGATCTGCCCGTaGGTCTTCATGTGGCGCGTG +
Preference number: 4 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLLPICP*VFMWRV
Trigger: CACGCGCCACATGAAGACGCACGGGCAGATCGGCAA...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAAAGCGGTACACCTCCTTaGCGATCTGCCCGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHESGTPP*RSARAS
Trigger: AGACGCACGGGCAGATCGGCAAGGAGGTGTACCGCT...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGTCTTGTTTTGTAAAATaGCCAGGCATTCTCGATTAT +
Preference number: 4 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGSCFVK*PGILDY
Trigger: ATAATCGAGAATGCCTGGGCATTTTACAAAACAAGA...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGTGGGTGAGAGCAGGTaGTCATCTTCGTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLVGESR*SSSSGV
Trigger: CACCCCCGACGAAGATGACCACCTGCTCTCACCCAC...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGACAGATGCCTTTCGTaGGTGAGAGCAGGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCDRCLS*VRAGGH
Trigger: ATGACCACCTGCTCTCACCCACGAAAGGCATCTGTC...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCACGATGAGATTGCTCTaGAACTTGAAGGTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLTMRLL*NLKVLP
Trigger: CGGCAAGACCTTCAAGTTCCAGAGCAATCTCATCGT...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGCATTCGTCTGCTTaGGAAATGATGGATGACCCC +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCGHSSA*EMMDDP
Trigger: GGGGTCATCCATCATTTCCCAAGCAGACGAATGCCC...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp GGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGGGCATTCGTCTGCTTaGGAAATGATGGATGACCCC +
Preference number: 4 (lower is better)
Translates to: GGKSGQHSLGWQRFHCTGGHSSA*EMMDDP
Trigger: GGGGTCATCCATCATTTCCCAAGCAGACGAATGCCC...ACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCTTCTTGAACTTAAACTaGGTTTTGCACCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRFLNLN*VLHRLL
Trigger: CAGGAGCCGGTGCAAAACCCAGTTTAAGTTCAAGAA...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR TCA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGCACACCAAGGAGCCTTaGTGCAAGGTTCGGGGCGTT +
Preference number: 4 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQHTKEP*CKVRGV
Trigger: AACGCCCCGAACCTTGCATCAAGGCTCCTTGGTGTG...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCAATCTGGTAAGCTGGTaGGCACTGGCTAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTNLVSW*ALASCY
Trigger: ATAACAGCTAGCCAGTGCTCACCAGCTTACCAGATT...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTTTGCTTTGCAGGGCTaGGTTACAAGGAGCACCAAA +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAAFALQG*VTRSTK
Trigger: TTTGGTGCTCCTTGTAACTCAGCCCTGCAAAGCAAA...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAATTTGCGGCGGGACATTaGCCCGGCATCTATTCTGGC +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHEFAAGH*PGIYSG
Trigger: GCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAA...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGTCCCTCTGGGACAAGTaGTGCGGGTTGCCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQSLWDK*CGLPCL
Trigger: CAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGA...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGAGCAGGCACCCAAGCTaGCGCCACACTGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLSRHPS*RHTASF
Trigger: AAAGGAAGCAGTGTGGCGGCAGCTTGGGTGCCTGCT...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGGCTGCTTGCATGTTGTaGAAATGTAGCTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGAACML*KCSWKA
Trigger: AGCCTTCCAGCTACATTTGCACAACATGCAAGCAGC...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR GCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAAAGCGAGCCGGCCTTGTaGATGTGCGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHESEPAL*MCVFMW
Trigger: CCACATGAAGACGCACATGCACAAGGCCGGCTCGCT...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGACCTCCTTGCCGATCTaGCCGTGCGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLTSLPI*PCVFMW
Trigger: CCACATGAAGACGCACGGGCAGATCGGCAAGGAGGT...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGTCCTTTCTGTGTCACTaGAGGCCACCCCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLSFLCH*RPPHLP
Trigger: GGGGAGATGGGGTGGCCTGCAGTGACACAGAAAGGA...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCCAGCTCAGTTTGCATTaGTTTCTGCTGGTAAGGGCG +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCQLSLH*FLLVRA
Trigger: CGCCCTTACCAGCAGAAAGCAATGCAAACTGAGCTG...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCCTGCAGGTAGGAAACTaGAGTAGGAAACTGAAATCT +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSLQVGN*SRKLKS
Trigger: AGATTTCAGTTTCCTACTGCAGTTTCCTACCTGCAG...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCTTGGCCTCTTGCACTTaGAAATGTCTTCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGALASCT*KCLLEL
Trigger: AAGTTCAAGAAGACATTTGCAAGTGCAAGAGGCCAA...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR CCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAACACATGGTCAGCCTCTaGGGTGATGAGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHEHMVSL*GDELPL
Trigger: CAGAGGGAGCTCATCACCCCAGAGGCTGACCATGTG...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TCAGAGAGAAGCCCAACACGAACGGTTCTCTGTGTAGGCCAATTCCGACAAAAAGTGGGTGAGAGCAGGTaGTCATCTTCGTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SERSPTRTVLCVGQFRQKVGESR*SSSSGV
Trigger: CACCCCCGACGAAGATGACCACCTGCTCTCACCCAC...TTTTTGTCGGAATTGGCCTACACAGAGAACCGTTCGTGTTGGGCTTCTCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCCAATGTTCTCCTGCTTaGGACAGATGCCTTTCGTGG +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCQCSPA*DRCLSW
Trigger: CCACGAAAGGCATCTGTCCCAAGCAGGAGAACATTG...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTTGTGCAAATGTAGCTaGAAGGCTCATCTTTACCTG +
Preference number: 4 (lower is better)
Translates to: GGGDTEASQVSILSVGNGLCKCS*KAHLYL
Trigger: CAGGTAAAGATGAGCCTTCCAGCTACATTTGCACAA...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGACGCTGAAGGGCATCTaGCAGATGTCGCAGCGGTAC +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLTLKGI*QMSQRY
Trigger: GTACCGCTGCGACATCTGCCAGATGCCCTTCAGCGT...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCTACACGCGGCCACTGTaGCATTTTTGTATAACCTAT +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSYTRPL*HFCITY
Trigger: ATAGGTTATACAAAAATGCCACAGTGGCCGCGTGTA...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGCCATCTGGTCTGCTGTaGCCACACCAAGGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLPSGLL*PHQGAL
Trigger: CAAGGCTCCTTGGTGTGGCCACAGCAGACCAGATGG...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGACAATGCTTGTGCTTTaGGATGGCTTAGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGTMLVL*DGLVLA
Trigger: TGCCAGGACTAAGCCATCCCAAAGCACAAGCATTGT...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCACAATGCTTGTGCTTTaGGATGGCTTAGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTTMLVL*DGLVLA
Trigger: TGCCAGGACTAAGCCATCCCAAAGCACAAGCATTGT...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGGAGTCCGGGTTCTCTaGGAGCTCTCGGTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLGVRVL*ELSVSL
Trigger: TAGAGAGACCGAGAGCTCCCAGAGAACCCGGACTCC...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR TCA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGGATGCCTTTCGTGGGTaGGAGCAGGTGGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLDAFRG*EQVVIF
Trigger: GAAGATGACCACCTGCTCTCACCCACGAAAGGCATC...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGTTCCCTTATGTAATATaGAAGCCGAAATCAACACAG +
Preference number: 4 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATFPYVI*KPKSTQ
Trigger: CTGTGTTGATTTCGGCTTTCATATTACATAAGGGAA...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCACCGGGATGAAAGGCTaGTTTCCTTACTTTTCACAT +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLTGMKG*FPYFSH
Trigger: ATGTGAAAAGTAAGGAAATCAGCCTTTCATCCCGGT...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACTTTACTAAGCCATATTaGAATGACCTCCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: RGGGDTEASQVSILSVGNFTKPY*NDLLSS
Trigger: AGATGACAGGAGGTCATTTCAATATGGCTTAGTAAA...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCAAGCTGCCGCCACACTaGTTCCTTTTGTGCTCTATA +
Preference number: 4 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGKLPPH*FLLCSI
Trigger: TATAGAGCACAAAAGGAAGCAGTGTGGCGGCAGCTT...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp TCAGAGAGAAGCCCAACACGAACGGTTCTCTGTGTAGGCCAATTCCGACAAAAAAGCAGGCACCCAAGCTaGCGCCACACTGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SERSPTRTVLCVGQFRQKSRHPS*RHTASF
Trigger: AAAGGAAGCAGTGTGGCGGCAGCTTGGGTGCCTGCT...TTTTTGTCGGAATTGGCCTACACAGAGAACCGTTCGTGTTGGGCTTCTCTCTGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCCCCTCTAACATTGCTTaGGAGTCATTGCTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCPSNIA*ESLLRL
Trigger: TAGCCTGAGCAATGACTCGCAAGCAATGTTAGAGGG...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGAGTATCTGCTGGTCATaGACAACCTCAGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGASICWS*TTSECC
Trigger: ACAGCATTCTGAGGTTGTGCATGACCAGCAGATACT...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAAAACAAAGAAGGGATaGATACCCAACAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: VRGGGDTEASQVSILSVGKTKKG*IPNKIS
Trigger: AGAGATTTTGTTGGGTATCCATCCCTTCTTTGTTTT...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCCAGGATAGTATCTGCTaGTCATGCACAACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTQDSIC*SCTTSE
Trigger: TTCTGAGGTTGTGCATGACCAGCAGATACTATCCTG...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCCAGGATAGTATCTGCTaGTCATGCACAACCTCAGAA +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAAQDSIC*SCTTSE
Trigger: TTCTGAGGTTGTGCATGACCAGCAGATACTATCCTG...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGAAAGCAAAGAAAACTTaGGGACTTGTCTCGTACCCC +
Preference number: 4 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGKAKKT*GLVSYP
Trigger: GGGGTACGAGACAAGTCCCCAAGTTTTCTTTGCTTT...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR TCA 90 bp TCAGAGAGAAGCCCAACACGAACGGTTCTCTGTGTAGGCCAATTCCGACAAAAAGATGCCTTTCGTGGGTaGGAGCAGGTGGTCATCTTC +
Preference number: 4 (lower is better)
Translates to: SERSPTRTVLCVGQFRQKDAFRG*EQVVIF
Trigger: GAAGATGACCACCTGCTCTCACCCACGAAAGGCATC...TTTTTGTCGGAATTGGCCTACACAGAGAACCGTTCGTGTTGGGCTTCTCTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCTTCCCTTATGTAATATaGAAGCCGAAATCAACACAG +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSFPYVI*KPKSTQ
Trigger: CTGTGTTGATTTCGGCTTTCATATTACATAAGGGAA...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCAGTGCCTACATCATATaGACCAACCAATATATCCAT +
Preference number: 4 (lower is better)
Translates to: GGDTEASQVSILSVGNGSSAYII*TNQYIH
Trigger: ATGGATATATTGGTTGGTTCATATGATGTAGGCACT...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCATGGAGTCTCCTTCCTaGAATCCAATTTGTACCGGT +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCMESPS*NPICTG
Trigger: ACCGGTACAAATTGGATTTCAGGAAGGAGACTCCAT...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCATGGCAGACACATGCTaGACTCAACATTGTGACATT +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAAMADTC*TQHCDI
Trigger: AATGTCACAATGTTGAGTTCAGCATGTGTCTGCCAT...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGATGGCAGACACATGCTaGACTCAACATTGTGACATT +
Preference number: 4 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGAMADTC*TQHCDI
Trigger: AATGTCACAATGTTGAGTTCAGCATGTGTCTGCCAT...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGTGCGTGTTCTGCGCGTaGTGCAGCAGGAACCACGCG +
Preference number: 4 (lower is better)
Translates to: KSASNRKASAFGKELPKRCVFCA*CSRNHA
Trigger: CGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCA...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGTGCACAACCTCAGAATaGTGTCGGGCCATTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLCTTSE*CRAISQ
Trigger: CTGGGAAATGGCCCGACAGCATTCTGAGGTTGTGCA...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCAGTATCTGCTGGTCATaGACAACCTCAGAATGCTGT +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCSICWS*TTSECC
Trigger: ACAGCATTCTGAGGTTGTGCATGACCAGCAGATACT...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCCAACAGGATAGTATCTaGTGGTCATGCACAACCTCA +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCQQDSI*WSCTTS
Trigger: TGAGGTTGTGCATGACCAGCAGATACTATCCTGTTG...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCACAAAAGCTTTAAAGTaGGGGTCAACAGAATTCAAA +
Preference number: 4 (lower is better)
Translates to: QVSILSVGNGSTVQVRGATKALK*GSTEFK
Trigger: TTTGAATTCTGTTGACCCGCACTTTAAAGCTTTTGT...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCGGATGTCCAAGGTTGTaGTGGGTTTATTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLGCPRL*WVYFFI
Trigger: AATGAAGAAATAAACCCAGCACAACCTTGGACATCC...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAAATTTCCCATCTGGTCTaGTGTGGCCACACCAAGGAG +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHEISHLV*CGHTKE
Trigger: CTCCTTGGTGTGGCCACAGCAGACCAGATGGGAAAT...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGATTTCCCATCTGGTCTaGTGTGGCCACACCAAGGAG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLISHLV*CGHTKE
Trigger: CTCCTTGGTGTGGCCACAGCAGACCAGATGGGAAAT...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCCTGCAGGTAGGAAACTaGAGTAGGAAACTGAAATCT +
Preference number: 4 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTLQVGN*SRKLKS
Trigger: AGATTTCAGTTTCCTACTGCAGTTTCCTACCTGCAG...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCTACACTTCTTCAAACTaGTTGGCCTCTTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCYTSSN*LASCTC
Trigger: GCAAGTGCAAGAGGCCAAGCAGTTTGAAGAAGTGTA...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR CCA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGAGTGCTCGGACGACGTaGCGAAGGGCGACTGTCGTG +
Preference number: 4 (lower is better)
Translates to: KSASNRKASAFGKELPKRSARTT*RRATVV
Trigger: CACGACAGTCGCCCTTCGCCACGTCGTCCGAGCACT...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp GGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTATAGTGCCAGTATTGTaGATGCCACGCTTAGCAATA +
Preference number: 4 (lower is better)
Translates to: GGKSGQHSLGWQRFHCTGIVPVL*MPRLAI
Trigger: TATTGCTAAGCGTGGCATTCACAATACTGGCACTAT...ACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCACCGGGATGAAAGGCTaGTTTCCTTACTTTTCACAT +
Preference number: 4 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGTGMKG*FPYFSH
Trigger: ATGTGAAAAGTAAGGAAATCAGCCTTTCATCCCGGT...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGCACGAGACCTTCGGCTaGCGGTTACTTAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: KSASNRKASAFGKELPKRHETFG*RLLRTG
Trigger: CCCGGTCCTAAGTAACCGTCAGCCGAAGGTCTCGTG...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGTTTTGCACCGGCTCCTaGCACTTTCTTTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQFCTGS*HFLSGS
Trigger: AGACCCTGAAAGAAAGTGTCAGGAGCCGGTGCAAAA...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR GCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAATCGTTAGTCAGCAAGTaGTCGCCGTGCCACTTTTTC +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHESLVSK*SPCHFF
Trigger: GAAAAAGTGGCACGGCGAGCACTTGCTGACTAACGA...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAATTGCTTGCGAGTCATTaGTCAGGCTACTACCGGGTT +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHELLASH*SGYYRV
Trigger: AACCCGGTAGTAGCCTGAGCAATGACTCGCAAGCAA...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCATTTGGTAAGGAATTaGCCAAAAGGATGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGHLVRN*PKGCLV
Trigger: AACCAAGCATCCTTTTGGGCAATTCCTTACCAAATG...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAACCAAAATCACGGGTTTaGCTGTGTTCCACGAGACCT +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHEPKSRV*LCSTRP
Trigger: AGGTCTCGTGGAACACAGGCAAACCCGTGATTTTGG...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGCAATGTTCTCCTGCTTaGGACAGATGCCTTTCGTGG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLQCSPA*DRCLSW
Trigger: CCACGAAAGGCATCTGTCCCAAGCAGGAGAACATTG...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGCAGCATTCTCTCGGTTaGCAACGGTTCCACTGTACA +
Preference number: 4 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLQHSLG*QRFHCT
Trigger: TGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTAAAACAAAGAAGGGATaGATACCCAACAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: GGGDTEASQVSILSVGNGKTKKG*IPNKIS
Trigger: AGAGATTTTGTTGGGTATCCATCCCTTCTTTGTTTT...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCAAAGGGAGGACGATGTaGAATGTTACTGACATCTTT +
Preference number: 4 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTKGRTM*NVTDIF
Trigger: AAAGATGTCAGTAACATTCCACATCGTCCTCCCTTT...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCAGAGAGAACGAGATATaGAAAGGCACCAAATTCATC +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAARENEI*KGTKFI
Trigger: GATGAATTTGGTGCCTTTCCATATCTCGTTCTCTCT...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TCAGAGAGAAGCCCAACACGAACGGTTCTCTGTGTAGGCCAATTCCGACAAAAAACTCTAGGACCTCAGTaGGGCATCCAAAGGCAACAG +
Preference number: 4 (lower is better)
Translates to: SERSPTRTVLCVGQFRQKTLGPQ*GIQRQQ
Trigger: CTGTTGCCTTTGGATGCCCCACTGAGGTCCTAGAGT...TTTTTGTCGGAATTGGCCTACACAGAGAACCGTTCGTGTTGGGCTTCTCTCTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGCTTGTGCTTTGGGATaGCTTAGTCCTGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLACALG*LSPGNL
Trigger: CAGATTGCCAGGACTAAGCCATCCCAAAGCACAAGC...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CAA 72 bp CACAATTTCTCAAGGACTAAAGCAGCTCAGTTTGCATaGCTTTCTGCTGGTAAGGGCGGGAGAGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: HNFSRTKAAQFA*LSAGKGGRGGG
Trigger: ACCACCACCTCTCCCGCCCTTACCAGCAGAAAGCAATGCAAACTGAGCTGCTTTAGTCCTTGAGAAATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CAA 72 bp TTCTCTGCAGTCACAGAGACACACAATGCTTGTGCTTaGGGATGGCTTAGTCCTGGCAATCTGGTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FSAVTETHNACA*GWLSPGNLVSW
Trigger: CCAGCTTACCAGATTGCCAGGACTAAGCCATCCCAAAGCACAAGCATTGTGTGTCTCTGTGACTGCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGCATCTTCGTCGGGGGTaGCTTGGATCCCGATCTCCA +
Preference number: 4 (lower is better)
Translates to: KSASNRKASAFGKELPKRHLRRG*LGSRSP
Trigger: TGGAGATCGGGATCCAAGTCACCCCCGACGAAGATG...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGGGGTGCTGTAGACGCTaGAGGGCATCTGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: KSASNRKASAFGKELPKRGCCRR*RASGRC
Trigger: ACATCTGCCAGATGCCCTTCAGCGTCTACAGCACCC...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGAATCTGGTAAGCTGGTaGGCACTGGCTAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQNLVSW*ALASCY
Trigger: ATAACAGCTAGCCAGTGCTCACCAGCTTACCAGATT...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTTTACTAAGCCATATTaGAATGACCTCCTGTCATCT +
Preference number: 4 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAAFTKPY*NDLLSS
Trigger: AGATGACAGGAGGTCATTTCAATATGGCTTAGTAAA...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGTCTTTACCTGACAACTaGCACTGGCATCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLSLPDN*HWHPKG
Trigger: TCCCTTTGGATGCCAGTGTCAGTTGTCAGGTAAAGA...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR GCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAATCGGGACGACATGAGTaGTACATCTCCATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHESGRHE*YISIPV
Trigger: AACTGGAATGGAGATGTAGCACTCATGTCGTCCCGA...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCCATTTGGTAAGGAATTaGCCAAAAGGATGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGHLVRN*PKGCLV
Trigger: AACCAAGCATCCTTTTGGGCAATTCCTTACCAAATG...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGACGATGAGATTGCTCTaGAACTTGAAGGTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLTMRLL*NLKVLP
Trigger: CGGCAAGACCTTCAAGTTCCAGAGCAATCTCATCGT...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CCA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCAAAGGGAGGACGATGTaGAATGTTACTGACATCTTT +
Preference number: 4 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCKGRTM*NVTDIF
Trigger: AAAGATGTCAGTAACATTCCACATCGTCCTCCCTTT...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGATGGAGTCTCCTTCCTaGAATCCAATTTGTACCGGT +
Preference number: 4 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQMESPS*NPICTG
Trigger: ACCGGTACAAATTGGATTTCAGGAAGGAGACTCCAT...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAACAAGCGTACAAATaGAATGGCAGACACATGCTG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLEQAYK*NGRHML
Trigger: CAGCATGTGTCTGCCATTTCATTTGTACGCTTGTTC...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGCACGCAGAGGTGAAGTaGTCACGGATGAGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: KSASNRKASAFGKELPKRHAEVK*SRMSEG
Trigger: ACCCTCACTCATCCGTGATCACTTCACCTCTGCGTG...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR TCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAATCTCCATTCCAGTTCTaGAACAAAGTGCTACGACTT +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHESPFQF*NKVLRL
Trigger: AAGTCGTAGCACTTTGTTTCAGAACTGGAATGGAGA...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp TCAGAGAGAAGCCCAACACGAACGGTTCTCTGTGTAGGCCAATTCCGACAAAAACAACAGGATAGTATCTaGTGGTCATGCACAACCTCA +
Preference number: 4 (lower is better)
Translates to: SERSPTRTVLCVGQFRQKQQDSI*WSCTTS
Trigger: TGAGGTTGTGCATGACCAGCAGATACTATCCTGTTG...TTTTTGTCGGAATTGGCCTACACAGAGAACCGTTCGTGTTGGGCTTCTCTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAATTGTGCAAATGTAGCTaGAAGGCTCATCTTTACCTG +
Preference number: 4 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHELCKCS*KAHLYL
Trigger: CAGGTAAAGATGAGCCTTCCAGCTACATTTGCACAA...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CAA 72 bp TGTTTCACAATTTCTCAAGGACTAAAGCAGCTCAGTTaGCATTGCTTTCTGCTGGTAAGGGCGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: CFTISQGLKQLS*HCFLLVRAGEV
Trigger: CACCTCTCCCGCCCTTACCAGCAGAAAGCAATGCAAACTGAGCTGCTTTAGTCCTTGAGAAATTGTGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGCACTCACATCAAATTaGATGGCAGTAGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLALTSN*MAVEKL
Trigger: CAGTTTTTCTACTGCCATTCAATTTGATGTGAGTGC...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGGGATGTCCAAGGTTGTaGTGGGTTTATTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQGCPRL*WVYFFI
Trigger: AATGAAGAAATAAACCCAGCACAACCTTGGACATCC...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CCA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGAGAGAGAACGAGATATaGAAAGGCACCAAATTCATC +
Preference number: 4 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLRENEI*KGTKFI
Trigger: GATGAATTTGGTGCCTTTCCATATCTCGTTCTCTCT...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CAA 72 bp CATCTCCATTCCAGTTCTGAAACAAAGTGCTACGACTaGAAAGATTGTTATCCGCTGTACATCCACACCCCC +
Preference number: 4 (lower is better)
Translates to: HLHSSSETKCYD*KDCYPLYIHTP
Trigger: GGGGGTGTGGATGTACAGCGGATAACAATCTTTCAAGTCGTAGCACTTTGTTTCAGAACTGGAATGGAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGAGTGCCTACATCATATaGACCAACCAATATATCCAT +
Preference number: 4 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQSAYII*TNQYIH
Trigger: ATGGATATATTGGTTGGTTCATATGATGTAGGCACT...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR TCA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGTTTGCTTTGCAGGGCTaGGTTACAAGGAGCACCAAA +
Preference number: 4 (lower is better)
Translates to: KSASNRKASAFGKELPKRFALQG*VTRSTK
Trigger: TTTGGTGCTCCTTGTAACTCAGCCCTGCAAAGCAAA...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGCACAGAGACACACAATaGTTGTGCTTTGGGATGGCT +
Preference number: 4 (lower is better)
Translates to: KSASNRKASAFGKELPKRHRDTQ*LCFGMA
Trigger: AGCCATCCCAAAGCACAAGCATTGTGTGTCTCTGTG...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR GCA 90 bp TCAGAGAGAAGCCCAACACGAACGGTTCTCTGTGTAGGCCAATTCCGACAAAAAACAAAAGCTTTAAAGTaGGGGTCAACAGAATTCAAA +
Preference number: 4 (lower is better)
Translates to: SERSPTRTVLCVGQFRQKTKALK*GSTEFK
Trigger: TTTGAATTCTGTTGACCCGCACTTTAAAGCTTTTGT...TTTTTGTCGGAATTGGCCTACACAGAGAACCGTTCGTGTTGGGCTTCTCTCTGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CAA 72 bp GAGGAAAGAGTGCATCGAACAGAAAAGCTTCTGCATTaGGTAAGGAATTGCCCAAAAGGATGCTTGGTTATA +
Preference number: 4 (lower is better)
Translates to: EERVHRTEKLLH*VRNCPKGCLVI
Trigger: TATAACCAAGCATCCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
3UTR CAA 72 bp GCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATaGCCCAAAAGGATGCTTGGTTATACTTTCATAACC +
Preference number: 4 (lower is better)
Translates to: ASNRKASAFGKE*PKRMLGYTFIT
Trigger: GGTTATGAAAGTATAACCAAGCATCCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS GCA 90 bp AGAACTCGCACGACTTGCTCTTGGCTGGCGGCTGCGGGGGCGGCGTaGCGCCAGGGGGCATGGGCGGCAGCGGCGGCGTGCTCAGGAACG +
Preference number: 5 (lower is better)
Translates to: RTRTTCSWLAAAGAA*RQGAWAAAAACSGT
Trigger: CGTTCCTGAGCACGCCGCCGCTGCCGCCCATGCCCCCTGGCGGCACGCCGCCCCCGCAGCCGCCAGCCAAGAGCAAGTCGTGCGAGTTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 90 bp AAGAGAGGCGGCGTGCCCGGCAGGCGGCCCTCGCCGAAGCCCGGGTaGTCCCGCAGGATGGGGCCCGTCATGCGCAGCAGGTTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: KRGGVPGRRPSPKPG*SRRMGPVMRSRLKG
Trigger: CCCCTTCAACCTGCTGCGCATGACGGGCCCCATCCTGCGGGACCACCCGGGCTTCGGCGAGGGCCGCCTGCCGGGCACGCCGCCTCTCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 90 bp TCCTCCTCCTCCGGCTCGTGGCCCAGCGACGGGTCGCTCTCGTGGTaGCGGAAGTCACCGTCGGCCGCCTTGAGGCCCTCGCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: SSSSGSWPSDGSLSW*RKSPSAALRPSPAS
Trigger: GCTGGCGGGCGAGGGCCTCAAGGCGGCCGACGGTGACTTCCGCCACCACGAGAGCGACCCGTCGCTGGGCCACGAGCCGGAGGAGGAGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 90 bp TCGTCCTCCTCCTCCGGCTCGTGGCCCAGCGACGGGTCGCTCTCGTaGTGGCGGAAGTCACCGTCGGCCGCCTTGAGGCCCTCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: SSSSSGSWPSDGSLS*WRKSPSAALRPSPA
Trigger: GGCGGGCGAGGGCCTCAAGGCGGCCGACGGTGACTTCCGCCACCACGAGAGCGACCCGTCGCTGGGCCACGAGCCGGAGGAGGAGGACGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGGCGCCGCGCTTCTGCTaGTCGGCCAGGAGCTCGCCG +
Preference number: 5 (lower is better)
Translates to: LSVGNGSTVQVRGAGARAAPRFC*SARSSP
Trigger: CGGCGAGCTCCTGGCCGACAAGCAGAAGCGCGGCGC...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCTCACCGTCGGCCGCCTaGAGGCCCTCGCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGSPSAA*RPSPAS
Trigger: GCTGGCGGGCGAGGGCCTCAAGGCGGCCGACGGTGA...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 90 bp AGGTTGAAGGGGTTGCTGTCGCCCAGGAAATTCATGAGCGGGGACTaGGCCACGGCCTCCGGCCCGAGCGGCGGCGGGATGGTGAGCCGC +
Preference number: 5 (lower is better)
Translates to: RLKGLLSPRKFMSGD*ATASGPSGGGMVSR
Trigger: GCGGCTCACCATCCCGCCGCCGCTCGGGCCGGAGGCCGTGGCGCAGTCCCCGCTCATGAATTTCCTGGGCGACAGCAACCCCTTCAACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 90 bp TCCTCCTCCTCCTCCTCCTCCTCCTCGTCCTCCTCCTCCGGCTCGTaGCCCAGCGACGGGTCGCTCTCGTGGTGGCGGAAGTCACCGTCG +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSSSSSSGS*PSDGSLSWWRKSPS
Trigger: CGACGGTGACTTCCGCCACCACGAGAGCGACCCGTCGCTGGGCCACGAGCCGGAGGAGGAGGACGAGGAGGAGGAGGAGGAGGAGGAGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGTGCGGGTTGCCCTGTTaGCGGCGGGACATTGCCCCG +
Preference number: 5 (lower is better)
Translates to: FSRLATVPLYRCGAPGPACGLPC*RRDIAP
Trigger: CGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCA...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCGGCGGCGTGGAGCTGTaGCCCGCCAGCTCGCGGAGC +
Preference number: 5 (lower is better)
Translates to: VRGGGDTEASQVSILSVGGGVEL*PASSRS
Trigger: GCTCCGCGAGCTGGCGGGCAACAGCTCCACGCCGCC...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGATGTGGCGCGTGAGCTaGCTGCTCTGCGCGCACGCG +
Preference number: 5 (lower is better)
Translates to: FSRLATVPLYRCGAPGPAMWRVS*LLCAHA
Trigger: CGCGTGCGCGCAGAGCAGCAAGCTCACGCGCCACAT...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGCAGACACAGGTTAGGTaGGAGTGCCGCCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: LSVGNGSTVQVRGAGARAQTQVR*ECRLPW
Trigger: CCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTG...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGGACAAGTGCTGCGGGTaGCCCTGTTTGCGGCGGGAC +
Preference number: 5 (lower is better)
Translates to: FSRLATVPLYRCGAPGPADKCCG*PCLRRD
Trigger: GTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTC...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGCGGCGTGGAGCTGTaGCCCGCCAGCTCGCGGAGC +
Preference number: 5 (lower is better)
Translates to: RGGGDTEASQVSILSVGNGGVEL*PASSRS
Trigger: GCTCCGCGAGCTGGCGGGCAACAGCTCCACGCCGCC...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCTCACCGTCGGCCGCCTaGAGGCCCTCGCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: QVSILSVGNGSTVQVRGASPSAA*RPSPAS
Trigger: GCTGGCGGGCGAGGGCCTCAAGGCGGCCGACGGTGA...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCCGCCGTTCTCGCGGTaGCGGCTCAGCTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: SILSVGNGSTVQVRGAGAPPFSR*RLSSES
Trigger: GGACTCGGAGCTGAGCCGCAACCGCGAGAACGGCGG...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS TCA 90 bp GGGAGAGCGCCCAGGGCACGCAGAGGTGAAGTGATCACGGATGAGTaGGGGTGGGAGGAGGCAGCTATGGGGGCCACCGCTGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRAPRARRGEVITDE*GWEEAAMGATAGSW
Trigger: CCAGCTGCCAGCGGTGGCCCCCATAGCTGCCTCCTCCCACCCTCACTCATCCGTGATCACTTCACCTCTGCGTGCCCTGGGCGCTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS GCA 90 bp AGGAAGGCGCCGCGCTTCTGCTTGTCGGCCAGGAGCTCGCCGTACTaGGGCAGTGCGCCTAGGCCCACGTTCTCCATGACCTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RKAPRFCLSARSSPY*GSAPRPTFSMTLPS
Trigger: GCTGGGCAAGGTCATGGAGAACGTGGGCCTAGGCGCACTGCCGCAGTACGGCGAGCTCCTGGCCGACAAGCAGAAGCGCGGCGCCTTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 90 bp GTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTaGGGGGCGCCGGGGCCCGCGCGCTTAGCTCCTCTCGGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: VRSAFSRLATVPLYR*GAPGPARLAPLGLL
Trigger: GAGCAGGCCGAGAGGAGCTAAGCGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGGTCATGCGCAGCAGGTaGAAGGGGTTGCTGTCGCCC +
Preference number: 5 (lower is better)
Translates to: FSRLATVPLYRCGAPGPAVMRSR*KGLLSP
Trigger: GGGCGACAGCAACCCCTTCAACCTGCTGCGCATGAC...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCTCACCGTCGGCCGCCTaGAGGCCCTCGCCCGCCAGC +
Preference number: 5 (lower is better)
Translates to: GGDTEASQVSILSVGNGSSPSAA*RPSPAS
Trigger: GCTGGCGGGCGAGGGCCTCAAGGCGGCCGACGGTGA...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGTCCACCTTGATGCGCTaGGCGGCGCTGTTGAGCCCG +
Preference number: 5 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGSTLMR*AALLSP
Trigger: CGGGCTCAACAGCGCCGCCAAGCGCATCAAGGTGGA...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGAGGAACCACGCGCTGTaGAAGGGCTGCTTGCATGTT +
Preference number: 5 (lower is better)
Translates to: LSVGNGSTVQVRGAGARARNHAL*KGCLHV
Trigger: AACATGCAAGCAGCCCTTCAACAGCGCGTGGTTCCT...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGCAGAACTCGCACGACTaGCTCTTGGCTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGQNSHD*LLAGGC
Trigger: GCAGCCGCCAGCCAAGAGCAAGTCGTGCGAGTTCTG...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCGCGCCGCGCTTCTGCTaGTCGGCCAGGAGCTCGCCG +
Preference number: 5 (lower is better)
Translates to: GGDTEASQVSILSVGNGSAPRFC*SARSSP
Trigger: CGGCGAGCTCCTGGCCGACAAGCAGAAGCGCGGCGC...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCTCCACCTTGATGCGCTaGGCGGCGCTGTTGAGCCCG +
Preference number: 5 (lower is better)
Translates to: SILSVGNGSTVQVRGAGASTLMR*AALLSP
Trigger: CGGGCTCAACAGCGCCGCCAAGCGCATCAAGGTGGA...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCCACACCAAGGAGCCTaGATGCAAGGTTCGGGGCGT +
Preference number: 5 (lower is better)
Translates to: FSRLATVPLYRCGAPGPAPHQGA*MQGSGR
Trigger: ACGCCCCGAACCTTGCATCAAGGCTCCTTGGTGTGG...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS TCA 90 bp CACCACCGCCGTTCTCGCGGTTGCGGCTCAGCTCCGAGTCCATGCTaGAGCTCGACTCGGGCCGGCTCTCGTTCTCCAGTAGCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: HHRRSRGCGSAPSPC*SSTRAGSRSPVAAP
Trigger: AGGAGCTGCTACTGGAGAACGAGAGCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGCTGAGCCGCAACCGCGAGAACGGCGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGCGGCGTGGAGCTGTaGCCCGCCAGCTCGCGGAGC +
Preference number: 5 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGAGGVEL*PASSRS
Trigger: GCTCCGCGAGCTGGCGGGCAACAGCTCCACGCCGCC...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCGCCAGCGAGCCGGCCTaGTGCATGTGCGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: SILSVGNGSTVQVRGAGAASEPA*CMCVFM
Trigger: CATGAAGACGCACATGCACAAGGCCGGCTCGCTGGC...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCCCGCCGTTCTCGCGGTaGCGGCTCAGCTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: GGDTEASQVSILSVGNGSPPFSR*RLSSES
Trigger: GGACTCGGAGCTGAGCCGCAACCGCGAGAACGGCGG...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGACGTTCTCCATGACCTaGCCCAGCACCAGCGCCTTC +
Preference number: 5 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGTFSMT*PSTSAF
Trigger: GAAGGCGCTGGTGCTGGGCAAGGTCATGGAGAACGT...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACATGTGGCGCGTGAGCTaGCTGCTCTGCGCGCACGCG +
Preference number: 5 (lower is better)
Translates to: RGGGDTEASQVSILSVGNMWRVS*LLCAHA
Trigger: CGCGTGCGCGCAGAGCAGCAAGCTCACGCGCCACAT...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCCAGCGGTACACCTCCTaGCCGATCTGCCCGTGCGTC +
Preference number: 5 (lower is better)
Translates to: VRGGGDTEASQVSILSVGQRYTS*PICPCV
Trigger: GACGCACGGGCAGATCGGCAAGGAGGTGTACCGCTG...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 90 bp GTTCTCGGACGAGTGCTCGGACGACGTGGCGAAGGGCGACTGTCGTaGGTCCGTGAAGCCCAGGAAGGGGTCCTTCATGAAGTGCCGCGA +
Preference number: 5 (lower is better)
Translates to: VLGRVLGRRGEGRLS*VREAQEGVLHEVPR
Trigger: TCGCGGCACTTCATGAAGGACCCCTTCCTGGGCTTCACGGACGCACGACAGTCGCCCTTCGCCACGTCGTCCGAGCACTCGTCCGAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 90 bp CCAGTGCGCCTGGGTCGGTGCGGGCGCAGACTGGGAGCTATAGATTaGAACGTGAAGATGGCGGAGTCCGGGTTCTCTGGGAGCTCTCGG +
Preference number: 5 (lower is better)
Translates to: PVRLGRCGRRLGAID*NVKMAESGFSGSSR
Trigger: CCGAGAGCTCCCAGAGAACCCGGACTCCGCCATCTTCACGTTGCAATCTATAGCTCCCAGTCTGCGCCCGCACCGACCCAGGCGCACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR CAA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCTGCGGGTTGCCCTGTTaGCGGCGGGACATTGCCCCG +
Preference number: 5 (lower is better)
Translates to: GGDTEASQVSILSVGNGSCGLPC*RRDIAP
Trigger: CGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCA...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCGCGCCGCGCTTCTGCTaGTCGGCCAGGAGCTCGCCG +
Preference number: 5 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAAAPRFC*SARSSP
Trigger: CGGCGAGCTCCTGGCCGACAAGCAGAAGCGCGGCGC...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS TCA 90 bp GATCCCGATCTCCACCGGCTCGGACACTTTCCTGAGCTCGGAGCGTaGGGAGGGTGGCGGGCTGTCCTTGTCCAGGGCCTTGTCATAGCA +
Preference number: 5 (lower is better)
Translates to: DPDLHRLGHFPELGA*GGWRAVLVQGLVIA
Trigger: TGCTATGACAAGGCCCTGGACAAGGACAGCCCGCCACCCTCCTCACGCTCCGAGCTCAGGAAAGTGTCCGAGCCGGTGGAGATCGGGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS GCA 90 bp CCTCTGGGACAAGTGCTGCGGGTTGCCCTGTTTGCGGCGGGACATTaGCCCGGCATCTATTCTGGCATCGCCCGGAGAGCTGCACTGATG +
Preference number: 5 (lower is better)
Translates to: PLGQVLRVALFAAGH*PGIYSGIARRAALM
Trigger: CATCAGTGCAGCTCTCCGGGCGATGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 90 bp TCCACATGGTCAGCCTCTGGGGTGATGAGCTCCCTCTGGGACAAGTaGTGCGGGTTGCCCTGTTTGCGGCGGGACATTGCCCCGGCATCT +
Preference number: 5 (lower is better)
Translates to: STWSASGVMSSLWDK*CGLPCLRRDIAPAS
Trigger: AGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACCCCAGAGGCTGACCATGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTGACAAGTGCTGCGGGTaGCCCTGTTTGCGGCGGGAC +
Preference number: 5 (lower is better)
Translates to: GGGDTEASQVSILSVGNGDKCCG*PCLRRD
Trigger: GTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTC...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCTCAGCCCCAGGCCACTaGGCTCCTCTATCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: VRGGGDTEASQVSILSVGSAPGH*APLSPD
Trigger: GTCTGGAGATAGAGGAGCCAAGTGGCCTGGGGCTGA...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGTCAGCATTCTCTCGGTaGGCAACGGTTCCACTGTAC +
Preference number: 5 (lower is better)
Translates to: FSRLATVPLYRCGAPGPASAFSR*ATVPLY
Trigger: GTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGA...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGCGCAATTGGGGGCAACTTaGAACAAAGTTGTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: LSVGNGSTVQVRGAGARAQLGAT*NKVVAV
Trigger: CACTGCCACAACTTTGTTCAAAGTTGCCCCCAATTG...CGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp TTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCCGCGACCAAAATCACGGGTTaGCCTGTGTTCCACGAGACC +
Preference number: 5 (lower is better)
Translates to: FSRLATVPLYRCGAPGPATKITG*PVFHET
Trigger: GGTCTCGTGGAACACAGGCAAACCCGTGATTTTGGT...CGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGCGGTGCACGATGAGATaGCTCTGGAACTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGRCTMR*LWNLKV
Trigger: GACCTTCAAGTTCCAGAGCAATCTCATCGTGCACCG...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTAGGTCCTTCTCCACCTaGATGCGCTTGGCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GGGDTEASQVSILSVGNGRSFST*MRLAAL
Trigger: CAGCGCCGCCAAGCGCATCAAGGTGGAGAAGGACCT...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCCAGACACAGGTTAGGTaGGAGTGCCGCCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: GGDTEASQVSILSVGNGSQTQVR*ECRLPW
Trigger: CCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTG...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 90 bp CTGGAAGGCTCATCTTTACGGGTGATGAGCTCCCTCTGGGACAAGTaGTGCGGGTTGCCCTGTTTGCGGCGGGACATTGCCCCGGCATCT +
Preference number: 5 (lower is better)
Translates to: LEGSSLRVMSSLWDK*CGLPCLRRDIAPAS
Trigger: AGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACCCGTAAAGATGAGCCTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443726.2
CDS CCA 90 bp CCTTTCGTGGGTGAGAGCAGGTGGTCATCTTCGTCGGGGGTGACTTaGATCCCGATCTCCACCGGCTCGGACACTTTCCTGAGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: PFVGESRWSSSSGVT*IPISTGSDTFLSSE
Trigger: CTCCGAGCTCAGGAAAGTGTCCGAGCCGGTGGAGATCGGGATCCAAGTCACCCCCGACGAAGATGACCACCTGCTCTCACCCACGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCGTTTGCGGCGGGACATaGCCCCGGCATCTATTCTGG +
Preference number: 5 (lower is better)
Translates to: GGDTEASQVSILSVGNGSVCGGT*PRHLFW
Trigger: CCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAAC...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCGTTTGCGGCGGGACATaGCCCCGGCATCTATTCTGG +
Preference number: 5 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRVCGGT*PRHLFW
Trigger: CCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAAC...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGGACAAGTGCTGCGGGTaGCCCTGTTTGCGGCGGGAC +
Preference number: 5 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGDKCCG*PCLRRD
Trigger: GTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTC...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GTGCGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAGCAGGTTGAAGGGGTaGCTGTCGCCCAGGAAATTC +
Preference number: 5 (lower is better)
Translates to: VRGGGDTEASQVSILSVGSRLKG*LSPRKF
Trigger: GAATTTCCTGGGCGACAGCAACCCCTTCAACCTGCT...GCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCATGTGGCGCGTGAGCTaGCTGCTCTGCGCGCACGCG +
Preference number: 5 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCMWRVS*LLCAHA
Trigger: CGCGTGCGCGCAGAGCAGCAAGCTCACGCGCCACAT...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCAGCGGTACACCTCCTaGCCGATCTGCCCGTGCGTC +
Preference number: 5 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGQRYTS*PICPCV
Trigger: GACGCACGGGCAGATCGGCAAGGAGGTGTACCGCTG...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGCAGCGGTACACCTCCTaGCCGATCTGCCCGTGCGTC +
Preference number: 5 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGAQRYTS*PICPCV
Trigger: GACGCACGGGCAGATCGGCAAGGAGGTGTACCGCTG...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCTCGGCCTGCTCGATTTaGACGTCGTTAGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: QHSLGWQRFHCTGAGRRGSACSI*TSLVSK
Trigger: CTTGCTGACTAACGACGTCAAAATCGAGCAGGCCGA...GCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCTCGGCCTGCTCGATTTaGACGTCGTTAGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: SILSVGNGSTVQVRGAGASACSI*TSLVSK
Trigger: CTTGCTGACTAACGACGTCAAAATCGAGCAGGCCGA...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCAGACACAGGTTAGGTaGGAGTGCCGCCTCCCCTGG +
Preference number: 5 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLQTQVR*ECRLPW
Trigger: CCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTG...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCTTCGTCGGGGGTGACTaGGATCCCGATCTCCACCGG +
Preference number: 5 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTFVGGD*DPDLHR
Trigger: CCGGTGGAGATCGGGATCCAAGTCACCCCCGACGAA...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGTCATGCGCAGCAGGTaGAAGGGGTTGCTGTCGCCC +
Preference number: 5 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGAVMRSR*KGLLSP
Trigger: GGGCGACAGCAACCCCTTCAACCTGCTGCGCATGAC...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGCAGTTCTTGAACACCTaGCCGCAGTACTCGCACGTG +
Preference number: 5 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATQFLNT*PQYSHV
Trigger: CACGTGCGAGTACTGCGGCAAGGTGTTCAAGAACTG...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCCAGTTCTTGAACACCTaGCCGCAGTACTCGCACGTG +
Preference number: 5 (lower is better)
Translates to: QVSILSVGNGSTVQVRGAQFLNT*PQYSHV
Trigger: CACGTGCGAGTACTGCGGCAAGGTGTTCAAGAACTG...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACCGGTGCACCGTCAAGTaGCTGCAGTTCTTGAACACC +
Preference number: 5 (lower is better)
Translates to: RGGGDTEASQVSILSVGNRCTVK*LQFLNT
Trigger: GGTGTTCAAGAACTGCAGCAACTTGACGGTGCACCG...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 90 bp GAAGGCTCATCTTTACGGGTGATGAGCTCCCTCTGGGACAAGTGCTaGGGGTTGCCCTGTTTGCGGCGGGACATTGCCCCGGCATCTATT +
Preference number: 5 (lower is better)
Translates to: EGSSLRVMSSLWDKC*GLPCLRRDIAPASI
Trigger: AATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACCCGTAAAGATGAGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443726.2
CDS-3UTR CAA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGTTTGCGGCGGGACATaGCCCCGGCATCTATTCTGG +
Preference number: 5 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGAVCGGT*PRHLFW
Trigger: CCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAAC...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCCAGAACTCGCACGACTaGCTCTTGGCTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCQNSHD*LLAGGC
Trigger: GCAGCCGCCAGCCAAGAGCAAGTCGTGCGAGTTCTG...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCCAGCGAGCCGGCCTaGTGCATGTGCGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: GGKSGQHSLGWQRFHCTGASEPA*CMCVFM
Trigger: CATGAAGACGCACATGCACAAGGCCGGCTCGCTGGC...ACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGCCGCCGTTCTCGCGGTaGCGGCTCAGCTCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLPPFSR*RLSSES
Trigger: GGACTCGGAGCTGAGCCGCAACCGCGAGAACGGCGG...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGACGTTCTCCATGACCTaGCCCAGCACCAGCGCCTTC +
Preference number: 5 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGTFSMT*PSTSAF
Trigger: GAAGGCGCTGGTGCTGGGCAAGGTCATGGAGAACGT...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACATTGCTTGCGAGTCATaGCTCAGGCTACTACCGGGT +
Preference number: 5 (lower is better)
Translates to: RGGGDTEASQVSILSVGNIACES*LRLLPG
Trigger: ACCCGGTAGTAGCCTGAGCAATGACTCGCAAGCAAT...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCCACAGAAAAGGCCGCTaGACTCGGGACGACATGAGT +
Preference number: 5 (lower is better)
Translates to: GGDTEASQVSILSVGNGSHRKGR*TRDDMS
Trigger: ACTCATGTCGTCCCGAGTCAAGCGGCCTTTTCTGTG...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCCCACACCAAGGAGCCTaGATGCAAGGTTCGGGGCGT +
Preference number: 5 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAAPHQGA*MQGSGR
Trigger: ACGCCCCGAACCTTGCATCAAGGCTCCTTGGTGTGG...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS TCA 90 bp AGCCGTGCGTGTTCTGCGCGTGCTGCAGCAGGAACCACGCGCTGTTaGAGGGCTGCTTGCATGTTGTGCAAATGTAGCTGGAAGGCTCAT +
Preference number: 5 (lower is better)
Translates to: SRACSARAAAGTTRC*RAACMLCKCSWKAH
Trigger: ATGAGCCTTCCAGCTACATTTGCACAACATGCAAGCAGCCCTTCAACAGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCACGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCTCAGCCCCAGGCCACTaGGCTCCTCTATCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCSAPGH*APLSPD
Trigger: GTCTGGAGATAGAGGAGCCAAGTGGCCTGGGGCTGA...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCAGCATTCTCTCGGTaGGCAACGGTTCCACTGTAC +
Preference number: 5 (lower is better)
Translates to: GGGDTEASQVSILSVGNGSAFSR*ATVPLY
Trigger: GTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGA...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCCCCTGGGCCCCGGGGCTACGACTTGAAAGATaGTTATCCGCTGTACATCCA +
Preference number: 5 (lower is better)
Translates to: RTSQTQVRLECRLPWAPGLRLER*LSAVHP
Trigger: TGGATGTACAGCGGATAACAATCTTTCAAGTCGTAG...CCCCGGGGCCCAGGGGAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCTTCCTGAAATCCAATTaGTACCGGTCTCAACAGCAG +
Preference number: 5 (lower is better)
Translates to: SILSVGNGSTVQVRGAGAFLKSN*YRSQQQ
Trigger: CTGCTGTTGAGACCGGTACAAATTGGATTTCAGGAA...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCAGGAACCACGCGCTGTaGAAGGGCTGCTTGCATGTT +
Preference number: 5 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAARNHAL*KGCLHV
Trigger: AACATGCAAGCAGCCCTTCAACAGCGCGTGGTTCCT...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCAAGTTGCTGCAGTTCTaGAACACCTTGCCGCAGTAC +
Preference number: 5 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRKLLQF*NTLPQY
Trigger: GTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACTT...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCCGGTGCACCGTCAAGTaGCTGCAGTTCTTGAACACC +
Preference number: 5 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAARCTVK*LQFLNT
Trigger: GGTGTTCAAGAACTGCAGCAACTTGACGGTGCACCG...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCTCAGCATTCTCTCGGTaGGCAACGGTTCCACTGTAC +
Preference number: 5 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLSAFSR*ATVPLY
Trigger: GTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGA...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCACTGGGAGCTATAGATaGCAACGTGAAGATGGCGGA +
Preference number: 5 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRTGSYR*QREDGG
Trigger: TCCGCCATCTTCACGTTGCAATCTATAGCTCCCAGT...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR CAA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGCAATGTTCTCCTGCTaGGGACAGATGCCTTTCGTG +
Preference number: 5 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGAAMFSC*GQMPFV
Trigger: CACGAAAGGCATCTGTCCCAAGCAGGAGAACATTGC...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCGCAATGTTCTCCTGCTaGGGACAGATGCCTTTCGTG +
Preference number: 5 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTAMFSC*GQMPFV
Trigger: CACGAAAGGCATCTGTCCCAAGCAGGAGAACATTGC...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp GGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTAGCAGGTTGAAGGGGTaGCTGTCGCCCAGGAAATTC +
Preference number: 5 (lower is better)
Translates to: GGKSGQHSLGWQRFHCTGSRLKG*LSPRKF
Trigger: GAATTTCCTGGGCGACAGCAACCCCTTCAACCTGCT...ACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGTCATGCGCAGCAGGTaGAAGGGGTTGCTGTCGCCC +
Preference number: 5 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLVMRSR*KGLLSP
Trigger: GGGCGACAGCAACCCCTTCAACCTGCTGCGCATGAC...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAACAGAACTCGCACGACTaGCTCTTGGCTGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHEQNSHD*LLAGGC
Trigger: GCAGCCGCCAGCCAAGAGCAAGTCGTGCGAGTTCTG...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGGCCAGCGAGCCGGCCTaGTGCATGTGCGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLASEPA*CMCVFM
Trigger: CATGAAGACGCACATGCACAAGGCCGGCTCGCTGGC...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAAAGGTCCTTCTCCACCTaGATGCGCTTGGCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHERSFST*MRLAAL
Trigger: CAGCGCCGCCAAGCGCATCAAGGTGGAGAAGGACCT...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCAAGTTGCTGCAGTTCTaGAACACCTTGCCGCAGTAC +
Preference number: 5 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLKLLQF*NTLPQY
Trigger: GTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACTT...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCATTGCTTGCGAGTCATaGCTCAGGCTACTACCGGGT +
Preference number: 5 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTIACES*LRLLPG
Trigger: ACCCGGTAGTAGCCTGAGCAATGACTCGCAAGCAAT...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AGAATGCTGTCGGGCCATTTCCCAGAGGAGCCCTCCAAAAACCCTATCTCTGGCCACAGAAAAGGCCGCTaGACTCGGGACGACATGAGT +
Preference number: 5 (lower is better)
Translates to: RMLSGHFPEEPSKNPISGHRKGR*TRDDMS
Trigger: ACTCATGTCGTCCCGAGTCAAGCGGCCTTTTCTGTG...GCCAGAGATAGGGTTTTTGGAGGGCTCCTCTGGGAAATGGCCCGACAGCATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGCAGCTCAGTTTGCATaGCTTTCTGCTGGTAAGGGC +
Preference number: 5 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGAAAQFA*LSAGKG
Trigger: GCCCTTACCAGCAGAAAGCAATGCAAACTGAGCTGC...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGCATTTGGTAAGGAATaGCCCAAAAGGATGCTTGGT +
Preference number: 5 (lower is better)
Translates to: QVSILSVGNGSTVQVRGAAFGKE*PKRMLG
Trigger: ACCAAGCATCCTTTTGGGCAATTCCTTACCAAATGC...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCGGGGCCGAAAAGCTTCTGCATTaGGTAAGGAATTGCCCAAAA +
Preference number: 5 (lower is better)
Translates to: SILSVGNGSTVQVRGAGAEKLLH*VRNCPK
Trigger: TTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTC...GGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCCACAATGCTTGTGCTTaGGGATGGCTTAGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAAHNACA*GWLSPG
Trigger: GCCAGGACTAAGCCATCCCAAAGCACAAGCATTGTG...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCACCAAAATCACGGGTTaGCCTGTGTTCCACGAGACC +
Preference number: 5 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAATKITG*PVFHET
Trigger: GGTCTCGTGGAACACAGGCAAACCCGTGATTTTGGT...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCCGGTGCACGATGAGATaGCTCTGGAACTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCRCTMR*LWNLKV
Trigger: GACCTTCAAGTTCCAGAGCAATCTCATCGTGCACCG...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGACGTTCTCCATGACCTaGCCCAGCACCAGCGCCTTC +
Preference number: 5 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLTFSMT*PSTSAF
Trigger: GAAGGCGCTGGTGCTGGGCAAGGTCATGGAGAACGT...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCTCGGCCTGCTCGATTTaGACGTCGTTAGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCSACSI*TSLVSK
Trigger: CTTGCTGACTAACGACGTCAAAATCGAGCAGGCCGA...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp GGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGCTACGACTTGAAAGATaGTTATCCGCTGTACATCCA +
Preference number: 5 (lower is better)
Translates to: GVAVTRRQVRSAFSRLATLRLER*LSAVHP
Trigger: TGGATGTACAGCGGATAACAATCTTTCAAGTCGTAG...CGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp CAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCCACAAAGTGCTACGACTaGAAAGATTGTTATCCGCTG +
Preference number: 5 (lower is better)
Translates to: QVSILSVGNGSTVQVRGATKCYD*KDCYPL
Trigger: CAGCGGATAACAATCTTTCAAGTCGTAGCACTTTGT...GGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCTTCCTGAAATCCAATTaGTACCGGTCTCAACAGCAG +
Preference number: 5 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRFLKSN*YRSQQQ
Trigger: CTGCTGTTGAGACCGGTACAAATTGGATTTCAGGAA...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCAAACTGCTTGGCCTCTaGCACTTGCAAATGTCTTCT +
Preference number: 5 (lower is better)
Translates to: GGDTEASQVSILSVGNGSKLLGL*HLQMSS
Trigger: AGAAGACATTTGCAAGTGCAAGAGGCCAAGCAGTTT...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR CAA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCAAGTTGCTGCAGTTCTaGAACACCTTGCCGCAGTAC +
Preference number: 5 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCKLLQF*NTLPQY
Trigger: GTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACTT...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS-3UTR CAA 90 bp AGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGCTTCCCCTCTAACATaGCTTGCGAGTCATTGCTCA +
Preference number: 5 (lower is better)
Translates to: RQVRSAFSRLATVPLYRCASPLT*LASHCS
Trigger: TGAGCAATGACTCGCAAGCAATGTTAGAGGGGAAGC...GCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp GGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCAATGGATGTCCAAGGTaGTGCTGGGTTTATTTCTTC +
Preference number: 5 (lower is better)
Translates to: GGDTEASQVSILSVGNGSNGCPR*CWVYFF
Trigger: GAAGAAATAAACCCAGCACAACCTTGGACATCCATT...GGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp GGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGCAATTGGGGGCAACTTaGAACAAAGTTGTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GKSGQHSLGWQRFHCTGAQLGAT*NKVVAV
Trigger: CACTGCCACAACTTTGTTCAAAGTTGCCCCCAATTG...CGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGAACTTAAACTGGGTTTaGCACCGGCTCCTGACACTT +
Preference number: 5 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGNLNWV*HRLLTL
Trigger: AAGTGTCAGGAGCCGGTGCAAAACCCAGTTTAAGTT...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR CAA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGAGCAGGTTGAAGGGGTaGCTGTCGCCCAGGAAATTC +
Preference number: 5 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLSRLKG*LSPRKF
Trigger: GAATTTCCTGGGCGACAGCAACCCCTTCAACCTGCT...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp CATGGCACGAAAGGTCCTGGCTGTGATGGAGTCTCCTTCCTGAAATCCAATTTGCAGTTCTTGAACACCTaGCCGCAGTACTCGCACGTG +
Preference number: 5 (lower is better)
Translates to: HGTKGPGCDGVSFLKSNLQFLNT*PQYSHV
Trigger: CACGTGCGAGTACTGCGGCAAGGTGTTCAAGAACTG...CAAATTGGATTTCAGGAAGGAGACTCCATCACAGCCAGGACCTTTCGTGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp CCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCTCAAAAGGCTCCACAATTaGTACTGCCTTAATCAACCC +
Preference number: 5 (lower is better)
Translates to: PSGFHRTSQTQVRLECRLKRLHN*YCLNQP
Trigger: GGGTTGATTAAGGCAGTACAAATTGTGGAGCCTTTT...GAGGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp CGGGGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGCCACTGTGGCATTTTaGTATAACCTATTAAGCAAA +
Preference number: 5 (lower is better)
Translates to: RGGGDTEASQVSILSVGNATVAF*YNLLSK
Trigger: TTTGCTTAATAGGTTATACAAAAATGCCACAGTGGC...GTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp CCATGGCACCCCAGGGCACACCAACAGGATAGTATCTGCTGGTCATGCACAACCGCATTTGGTAAGGAATaGCCCAAAAGGATGCTTGGT +
Preference number: 5 (lower is better)
Translates to: PWHPRAHQQDSICWSCTTAFGKE*PKRMLG
Trigger: ACCAAGCATCCTTTTGGGCAATTCCTTACCAAATGC...GGTTGTGCATGACCAGCAGATACTATCCTGTTGGTGTGCCCTGGGGTGCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCGAAAAGCTTCTGCATTaGGTAAGGAATTGCCCAAAA +
Preference number: 5 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGREKLLH*VRNCPK
Trigger: TTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTC...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp GGTGGCGGTGACACGGAGGCAAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTGAAACCAGAACAAACTaGGTTTTGAACAAGCGTACA +
Preference number: 5 (lower is better)
Translates to: GGGDTEASQVSILSVGNGETRTN*VLNKRT
Trigger: TGTACGCTTGTTCAAAACCAAGTTTGTTCTGGTTTC...ACCGTTGCCAACCGAGAGAATGCTGACCTGACTTGCCTCCGTGTCACCGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AAGTCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGACTTCTTCAAACTGCTaGGCCTCTTGCACTTGCAAA +
Preference number: 5 (lower is better)
Translates to: KSGQHSLGWQRFHCTGAGTSSNC*ASCTCK
Trigger: TTTGCAAGTGCAAGAGGCCAAGCAGTTTGAAGAAGT...CCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS-3UTR CAA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGTTCGTCGGGGGTGACTaGGATCCCGATCTCCACCGG +
Preference number: 5 (lower is better)
Translates to: KSASNRKASAFGKELPKRFVGGD*DPDLHR
Trigger: CCGGTGGAGATCGGGATCCAAGTCACCCCCGACGAA...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCACAAAGTGCTACGACTaGAAAGATTGTTATCCGCTG +
Preference number: 5 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAATKCYD*KDCYPL
Trigger: CAGCGGATAACAATCTTTCAAGTCGTAGCACTTTGT...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp TCAGGTCAGCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTGCGGGGCGCGCCACTGTGGCATTTTaGTATAACCTATTAAGCAAA +
Preference number: 5 (lower is better)
Translates to: SGQHSLGWQRFHCTGAGRATVAF*YNLLSK
Trigger: TTTGCTTAATAGGTTATACAAAAATGCCACAGTGGC...GCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGCTGACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AAAGCAGCAAAGCAGGGAAGAAAGACAAGAGGCCAACACTCTCCATGGCACGAAGCAGCTCAGTTTGCATaGCTTTCTGCTGGTAAGGGC +
Preference number: 5 (lower is better)
Translates to: KAAKQGRKTRGQHSPWHEAAQFA*LSAGKG
Trigger: GCCCTTACCAGCAGAAAGCAATGCAAACTGAGCTGC...TTCGTGCCATGGAGAGTGTTGGCCTCTTGTCTTTCTTCCCTGCTTTGCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGCACAATGCTTGTGCTTaGGGATGGCTTAGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQHNACA*GWLSPG
Trigger: GCCAGGACTAAGCCATCCCAAAGCACAAGCATTGTG...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp ACCAAATTCATCCCAGGCCCTCGCATTCGGAAACTGACGGAATGTAGGTTTCAGGCTTCCCCTCTAACATaGCTTGCGAGTCATTGCTCA +
Preference number: 5 (lower is better)
Translates to: TKFIPGPRIRKLTECRFQASPLT*LASHCS
Trigger: TGAGCAATGACTCGCAAGCAATGTTAGAGGGGAAGC...CTGAAACCTACATTCCGTCAGTTTCCGAATGCGAGGGCCTGGGATGAATTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGGAGTGCCGCCGAAACCAGAACAAACTaGGTTTTGAACAAGCGTACA +
Preference number: 5 (lower is better)
Translates to: NPRVSIGLRRHRLGWSAAETRTN*VLNKRT
Trigger: TGTACGCTTGTTCAAAACCAAGTTTGTTCTGGTTTC...GGCGGCACTCCAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGAGGAACCACGCGCTGTaGAAGGGCTGCTTGCATGTT +
Preference number: 5 (lower is better)
Translates to: KSASNRKASAFGKELPKRRNHAL*KGCLHV
Trigger: AACATGCAAGCAGCCCTTCAACAGCGCGTGGTTCCT...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGCGGTGCACCGTCAAGTaGCTGCAGTTCTTGAACACC +
Preference number: 5 (lower is better)
Translates to: KSASNRKASAFGKELPKRRCTVK*LQFLNT
Trigger: GGTGTTCAAGAACTGCAGCAACTTGACGGTGCACCG...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp TCAGAGAGAAGCCCAACACGAACGGTTCTCTGTGTAGGCCAATTCCGACAAAAAAGTGGCAGGTTCCAATaGGGGGCAACTTTGAACAAA +
Preference number: 5 (lower is better)
Translates to: SERSPTRTVLCVGQFRQKSGRFQ*GATLNK
Trigger: TTTGTTCAAAGTTGCCCCCAATTGGAACCTGCCACT...TTTTTGTCGGAATTGGCCTACACAGAGAACCGTTCGTGTTGGGCTTCTCTCTGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGCGGTGCACGATGAGATaGCTCTGGAACTTGAAGGTC +
Preference number: 5 (lower is better)
Translates to: KSASNRKASAFGKELPKRRCTMR*LWNLKV
Trigger: GACCTTCAAGTTCCAGAGCAATCTCATCGTGCACCG...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp TGCCTTAATCAACCCTCGGGTTTCCATAGGACTTCGCAGACACAGGTTAGGTTGAAAAGGCTCCACAATTaGTACTGCCTTAATCAACCC +
Preference number: 5 (lower is better)
Translates to: CLNQPSGFHRTSQTQVRLKRLHN*YCLNQP
Trigger: GGGTTGATTAAGGCAGTACAAATTGTGGAGCCTTTT...CAACCTAACCTGTGTCTGCGAAGTCCTATGGAAACCCGAGGGTTGATTAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp TCAGAGAGAAGCCCAACACGAACGGTTCTCTGTGTAGGCCAATTCCGACAAAAAAATGGATGTCCAAGGTaGTGCTGGGTTTATTTCTTC +
Preference number: 5 (lower is better)
Translates to: SERSPTRTVLCVGQFRQKNGCPR*CWVYFF
Trigger: GAAGAAATAAACCCAGCACAACCTTGGACATCCATT...TTTTTGTCGGAATTGGCCTACACAGAGAACCGTTCGTGTTGGGCTTCTCTCTGA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS-3UTR CAA 90 bp AAGAGTGCATCGAACAGAAAAGCTTCTGCATTTGGTAAGGAATTGCCCAAAAGGAGTGGCAGGTTCCAATaGGGGGCAACTTTGAACAAA +
Preference number: 5 (lower is better)
Translates to: KSASNRKASAFGKELPKRSGRFQ*GATLNK
Trigger: TTTGTTCAAAGTTGCCCCCAATTGGAACCTGCCACT...CCTTTTGGGCAATTCCTTACCAAATGCAGAAGCTTTTCTGTTCGATGCACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS CCA 72 bp GGCGTGCCCGGCAGGCGGCCCTCGCCGAAGCCCGGGTaGTCCCGCAGGATGGGGCCCGTCATGCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: GVPGRRPSPKPG*SRRMGPVMRSR
Trigger: CCTGCTGCGCATGACGGGCCCCATCCTGCGGGACCACCCGGGCTTCGGCGAGGGCCGCCTGCCGGGCACGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 72 bp CTTGCGCGGGAAGAGCCCGGGGAAGGGCTCGGTGCCTaGCGCGAAGCCGCCCCCGCGCCCGTTGACCGCGCC +
Preference number: 6 (lower is better)
Translates to: LAREEPGEGLGA*REAAPAPVDRA
Trigger: GGCGCGGTCAACGGGCGCGGGGGCGGCTTCGCGCCAGGCACCGAGCCCTTCCCCGGGCTCTTCCCGCGCAAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 90 bp CGCTTGGCGGCGCTGTTGAGCCCGGGGCTGGGCAGCGGCGCGGGCTaGCGCGGGAAGAGCCCGGGGAAGGGCTCGGTGCCTGGCGCGAAG +
Preference number: 6 (lower is better)
Translates to: RLAALLSPGLGSGAG*RGKSPGKGSVPGAK
Trigger: CTTCGCGCCAGGCACCGAGCCCTTCCCCGGGCTCTTCCCGCGCAAGCCCGCGCCGCTGCCCAGCCCCGGGCTCAACAGCGCCGCCAAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 72 bp GCGCTGTTGAGCCCGGGGCTGGGCAGCGGCGCGGGCTaGCGCGGGAAGAGCCCGGGGAAGGGCTCGGTGCCT +
Preference number: 6 (lower is better)
Translates to: ALLSPGLGSGAG*RGKSPGKGSVP
Trigger: AGGCACCGAGCCCTTCCCCGGGCTCTTCCCGCGCAAGCCCGCGCCGCTGCCCAGCCCCGGGCTCAACAGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 90 bp CCCGCGCCCGGGACCCCGGGCACCCCACCACCGCCGTTCTCGCGGTaGCGGCTCAGCTCCGAGTCCATGCTGAAGCTCGACTCGGGCCGG +
Preference number: 6 (lower is better)
Translates to: PAPGTPGTPPPPFSR*RLSSESMLKLDSGR
Trigger: CCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGCTGAGCCGCAACCGCGAGAACGGCGGTGGTGGGGTGCCCGGGGTCCCGGGCGCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS TCA 72 bp TGGGGTGCTGGGCGACGAGCCCCATCTCCTCGGCACTaGGGCGGTGCGGGTCCAGGTGGTGGCGCGGCGGGG +
Preference number: 6 (lower is better)
Translates to: WGAGRRAPSPRH*GGAGPGGGAAG
Trigger: CCCCGCCGCGCCACCACCTGGACCCGCACCGCCTCAGTGCCGAGGAGATGGGGCTCGTCGCCCAGCACCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS TCA 72 bp CGCTCTCGTGGTGGCGGAAGTCACCGTCGGCCGCCTTaGGGCCCTCGCCCGCCAGCTCGCTGGTGCCGGGCT +
Preference number: 6 (lower is better)
Translates to: RSRGGGSHRRPP*GPRPPARWCRA
Trigger: AGCCCGGCACCAGCGAGCTGGCGGGCGAGGGCCTCAAGGCGGCCGACGGTGACTTCCGCCACCACGAGAGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 72 bp TCGCTCTCGTGGTGGCGGAAGTCACCGTCGGCCGCCTaGAGGCCCTCGCCCGCCAGCTCGCTGGTGCCGGGC +
Preference number: 6 (lower is better)
Translates to: SLSWWRKSPSAA*RPSPASSLVPG
Trigger: GCCCGGCACCAGCGAGCTGGCGGGCGAGGGCCTCAAGGCGGCCGACGGTGACTTCCGCCACCACGAGAGCGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 72 bp TCCGGCTCGTGGCCCAGCGACGGGTCGCTCTCGTGGTaGCGGAAGTCACCGTCGGCCGCCTTGAGGCCCTCG +
Preference number: 6 (lower is better)
Translates to: SGSWPSDGSLSW*RKSPSAALRPS
Trigger: CGAGGGCCTCAAGGCGGCCGACGGTGACTTCCGCCACCACGAGAGCGACCCGTCGCTGGGCCACGAGCCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 72 bp TCCTCCGGCTCGTGGCCCAGCGACGGGTCGCTCTCGTaGTGGCGGAAGTCACCGTCGGCCGCCTTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: SSGSWPSDGSLS*WRKSPSAALRP
Trigger: GGGCCTCAAGGCGGCCGACGGTGACTTCCGCCACCACGAGAGCGACCCGTCGCTGGGCCACGAGCCGGAGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 72 bp ACCAGGAGAGGCTCCTTCCCAGTTCACCTGGCAGGCTaGCGCCGGCCGGAGGGGCTGCCGAGTCCCCGCGAG +
Preference number: 6 (lower is better)
Translates to: TRRGSFPVHLAG*RRPEGLPSPRE
Trigger: CTCGCGGGGACTCGGCAGCCCCTCCGGCCGGCGCCAGCCTGCCAGGTGAACTGGGAAGGAGCCTCTCCTGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS CAA 90 bp GACGGGATGAGCGCGGCGGGCGGCAGCTCCAGGTCCTTCTCCACCTaGATGCGCTTGGCGGCGCTGTTGAGCCCGGGGCTGGGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: DGMSAAGGSSRSFST*MRLAALLSPGLGSG
Trigger: GCCGCTGCCCAGCCCCGGGCTCAACAGCGCCGCCAAGCGCATCAAGGTGGAGAAGGACCTGGAGCTGCCGCCCGCCGCGCTCATCCCGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 90 bp GGCAGCTCCAGGTCCTTCTCCACCTTGATGCGCTTGGCGGCGCTGTaGAGCCCGGGGCTGGGCAGCGGCGCGGGCTTGCGCGGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: GSSRSFSTLMRLAAL*SPGLGSGAGLRGKS
Trigger: GCTCTTCCCGCGCAAGCCCGCGCCGCTGCCCAGCCCCGGGCTCAACAGCGCCGCCAAGCGCATCAAGGTGGAGAAGGACCTGGAGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 72 bp GGGTTGCTGTCGCCCAGGAAATTCATGAGCGGGGACTaGGCCACGGCCTCCGGCCCGAGCGGCGGCGGGATG +
Preference number: 6 (lower is better)
Translates to: GLLSPRKFMSGD*ATASGPSGGGM
Trigger: CATCCCGCCGCCGCTCGGGCCGGAGGCCGTGGCGCAGTCCCCGCTCATGAATTTCCTGGGCGACAGCAACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 72 bp TGCCCGCCAGCTCGCGGAGCCGCCGCGAGAAGTCCATaGCGGGCGAGTCGATGGCCATGGGGTTCAGGCGCA +
Preference number: 6 (lower is better)
Translates to: CPPARGAAARSP*RASRWPWGSGA
Trigger: TGCGCCTGAACCCCATGGCCATCGACTCGCCCGCCATGGACTTCTCGCGGCGGCTCCGCGAGCTGGCGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 72 bp TGGGCGGCAGCGGCGGCGTGCTCAGGAACGGGGACTTaGGGCTGGGCTGGAAGGGGTTCAGGAGCCGGTGCA +
Preference number: 6 (lower is better)
Translates to: WAAAAACSGTGT*GWAGRGSGAGA
Trigger: TGCACCGGCTCCTGAACCCCTTCCAGCCCAGCCCCAAGTCCCCGTTCCTGAGCACGCCGCCGCTGCCGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 72 bp AGGTCCTTCTCCACCTTGATGCGCTTGGCGGCGCTGTaGAGCCCGGGGCTGGGCAGCGGCGCGGGCTTGCGC +
Preference number: 6 (lower is better)
Translates to: RSFSTLMRLAAL*SPGLGSGAGLR
Trigger: GCGCAAGCCCGCGCCGCTGCCCAGCCCCGGGCTCAACAGCGCCGCCAAGCGCATCAAGGTGGAGAAGGACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 72 bp AGCGCGGCGGGCGGCAGCTCCAGGTCCTTCTCCACCTaGATGCGCTTGGCGGCGCTGTTGAGCCCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SAAGGSSRSFST*MRLAALLSPGL
Trigger: CAGCCCCGGGCTCAACAGCGCCGCCAAGCGCATCAAGGTGGAGAAGGACCTGGAGCTGCCGCCCGCCGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 72 bp TCCTCCTCCTCCTCCTCGTCCTCCTCCTCCGGCTCGTaGCCCAGCGACGGGTCGCTCTCGTGGTGGCGGAAG +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSGS*PSDGSLSWWRK
Trigger: CTTCCGCCACCACGAGAGCGACCCGTCGCTGGGCCACGAGCCGGAGGAGGAGGACGAGGAGGAGGAGGAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 72 bp GGGACCCCGGGCACCCCACCACCGCCGTTCTCGCGGTaGCGGCTCAGCTCCGAGTCCATGCTGAAGCTCGAC +
Preference number: 6 (lower is better)
Translates to: GTPGTPPPPFSR*RLSSESMLKLD
Trigger: GTCGAGCTTCAGCATGGACTCGGAGCTGAGCCGCAACCGCGAGAACGGCGGTGGTGGGGTGCCCGGGGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 90 bp TCGCCGTACTGCGGCAGTGCGCCTAGGCCCACGTTCTCCATGACCTaGCCCAGCACCAGCGCCTTCTCGTCAGCCAGCGCCTTGGCCGCG +
Preference number: 6 (lower is better)
Translates to: SPYCGSAPRPTFSMT*PSTSAFSSASALAA
Trigger: CGCGGCCAAGGCGCTGGCTGACGAGAAGGCGCTGGTGCTGGGCAAGGTCATGGAGAACGTGGGCCTAGGCGCACTGCCGCAGTACGGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 72 bp TGGGAGGAGGCAGCTATGGGGGCCACCGCTGGCAGCTaGGCAGGCCTGCACGGCCCTGCAATGTTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: WEEAAMGATAGS*AGLHGPAMFSC
Trigger: GCAGGAGAACATTGCAGGGCCGTGCAGGCCTGCCCAGCTGCCAGCGGTGGCCCCCATAGCTGCCTCCTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS GCA 72 bp GGGTTCAGGCGCATGACTCGGTCGAAGGCACTGGGGTaGTGGGCGACGAGCCCCATCTCCTCGGCACTGAGG +
Preference number: 6 (lower is better)
Translates to: GFRRMTRSKALG*WATSPISSALR
Trigger: CCTCAGTGCCGAGGAGATGGGGCTCGTCGCCCAGCACCCCAGTGCCTTCGACCGAGTCATGCGCCTGAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 72 bp CCGCGCTTCTGCTTGTCGGCCAGGAGCTCGCCGTACTaGGGCAGTGCGCCTAGGCCCACGTTCTCCATGACC +
Preference number: 6 (lower is better)
Translates to: PRFCLSARSSPY*GSAPRPTFSMT
Trigger: GGTCATGGAGAACGTGGGCCTAGGCGCACTGCCGCAGTACGGCGAGCTCCTGGCCGACAAGCAGAAGCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 72 bp GCATTCTCTCGGTTGGCAACGGTTCCACTGTACAGGTaGGGGGCGCCGGGGCCCGCGCGCTTAGCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: AFSRLATVPLYR*GAPGPARLAPL
Trigger: GAGAGGAGCTAAGCGCGCGGGCCCCGGCGCCCCGCACCTGTACAGTGGAACCGTTGCCAACCGAGAGAATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 72 bp TTCAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTaGGCGACGAGCCCCATCTCCTCGGCACTGAGGCGG +
Preference number: 6 (lower is better)
Translates to: FRRMTRSKALGC*ATSPISSALRR
Trigger: CCGCCTCAGTGCCGAGGAGATGGGGCTCGTCGCCCAGCACCCCAGTGCCTTCGACCGAGTCATGCGCCTGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 72 bp TGCGGCAGTGCGCCTAGGCCCACGTTCTCCATGACCTaGCCCAGCACCAGCGCCTTCTCGTCAGCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: CGSAPRPTFSMT*PSTSAFSSASA
Trigger: GGCGCTGGCTGACGAGAAGGCGCTGGTGCTGGGCAAGGTCATGGAGAACGTGGGCCTAGGCGCACTGCCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS TCA 72 bp CTCCACCGGCTCGGACACTTTCCTGAGCTCGGAGCGTaGGGAGGGTGGCGGGCTGTCCTTGTCCAGGGCCTT +
Preference number: 6 (lower is better)
Translates to: LHRLGHFPELGA*GGWRAVLVQGL
Trigger: AAGGCCCTGGACAAGGACAGCCCGCCACCCTCCTCACGCTCCGAGCTCAGGAAAGTGTCCGAGCCGGTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS CAA 72 bp GGGGTGATGAGCTCCCTCTGGGACAAGTGCTGCGGGTaGCCCTGTTTGCGGCGGGACATTGCCCCGGCATCT +
Preference number: 6 (lower is better)
Translates to: GVMSSLWDKCCG*PCLRRDIAPAS
Trigger: AGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS CAA 72 bp CGGGTGATGAGCTCCCTCTGGGACAAGTGCTGCGGGTaGCCCTGTTTGCGGCGGGACATTGCCCCGGCATCT +
Preference number: 6 (lower is better)
Translates to: RVMSSLWDKCCG*PCLRRDIAPAS
Trigger: AGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443726.2
CDS CAA 90 bp GGGGTGATGAGCTCCCTCTGGGACAAGTGCTGCGGGTTGCCCTGTTaGCGGCGGGACATTGCCCCGGCATCTATTCTGGCATCGCCCGGA +
Preference number: 6 (lower is better)
Translates to: GVMSSLWDKCCGLPC*RRDIAPASILASPG
Trigger: TCCGGGCGATGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS CAA 90 bp CGGGTGATGAGCTCCCTCTGGGACAAGTGCTGCGGGTTGCCCTGTTaGCGGCGGGACATTGCCCCGGCATCTATTCTGGCATCGCCCGGA +
Preference number: 6 (lower is better)
Translates to: RVMSSLWDKCCGLPC*RRDIAPASILASPG
Trigger: TCCGGGCGATGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443726.2
CDS TCA 72 bp CGTTCTCGCGGTTGCGGCTCAGCTCCGAGTCCATGCTaGAGCTCGACTCGGGCCGGCTCTCGTTCTCCAGTA +
Preference number: 6 (lower is better)
Translates to: RSRGCGSAPSPC*SSTRAGSRSPV
Trigger: TACTGGAGAACGAGAGCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGCTGAGCCGCAACCGCGAGAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 72 bp CAAGTGCTGCGGGTTGCCCTGTTTGCGGCGGGACATTaGCCCGGCATCTATTCTGGCATCGCCCGGAGAGCT +
Preference number: 6 (lower is better)
Translates to: QVLRVALFAAGH*PGIYSGIARRA
Trigger: AGCTCTCCGGGCGATGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 72 bp TCAGCCTCTGGGGTGATGAGCTCCCTCTGGGACAAGTaGTGCGGGTTGCCCTGTTTGCGGCGGGACATTGCC +
Preference number: 6 (lower is better)
Translates to: SASGVMSSLWDK*CGLPCLRRDIA
Trigger: GGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACCCCAGAGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS GCA 72 bp CGAGTGCTCGGACGACGTGGCGAAGGGCGACTGTCGTaGGTCCGTGAAGCCCAGGAAGGGGTCCTTCATGAA +
Preference number: 6 (lower is better)
Translates to: RVLGRRGEGRLS*VREAQEGVLHE
Trigger: TTCATGAAGGACCCCTTCCTGGGCTTCACGGACGCACGACAGTCGCCCTTCGCCACGTCGTCCGAGCACTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CCA 72 bp TCCACATGGTCAGCCTCTGGGGTGATGAGCTCCCTCTaGGACAAGTGCTGCGGGTTGCCCTGTTTGCGGCGG +
Preference number: 6 (lower is better)
Translates to: STWSASGVMSSL*DKCCGLPCLRR
Trigger: CCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACCCCAGAGGCTGACCATGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS CAA 72 bp ACAAGTGCTGCGGGTTGCCCTGTTTGCGGCGGGACATaGCCCCGGCATCTATTCTGGCATCGCCCGGAGAGC +
Preference number: 6 (lower is better)
Translates to: TSAAGCPVCGGT*PRHLFWHRPES
Trigger: GCTCTCCGGGCGATGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 90 bp CCCTCTGGGACAAGTGCTGCGGGTTGCCCTGTTTGCGGCGGGACATaGCCCCGGCATCTATTCTGGCATCGCCCGGAGAGCTGCACTGAT +
Preference number: 6 (lower is better)
Translates to: PSGTSAAGCPVCGGT*PRHLFWHRPESCTD
Trigger: ATCAGTGCAGCTCTCCGGGCGATGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 90 bp TCAGCCTCTGGGGTGATGAGCTCCCTCTGGGACAAGTGCTGCGGGTaGCCCTGTTTGCGGCGGGACATTGCCCCGGCATCTATTCTGGCA +
Preference number: 6 (lower is better)
Translates to: SASGVMSSLWDKCCG*PCLRRDIAPASILA
Trigger: TGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACCCCAGAGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS GCA 72 bp GCTCCCTCTGGGACAAGTGCTGCGGGTTGCCCTGTTTaGGGCGGGACATTGCCCCGGCATCTATTCTGGCAT +
Preference number: 6 (lower is better)
Translates to: APSGTSAAGCPV*GGTLPRHLFWH
Trigger: ATGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 72 bp CTGGGTCGGTGCGGGCGCAGACTGGGAGCTATAGATTaGAACGTGAAGATGGCGGAGTCCGGGTTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: LGRCGRRLGAID*NVKMAESGFSG
Trigger: CCCAGAGAACCCGGACTCCGCCATCTTCACGTTGCAATCTATAGCTCCCAGTCTGCGCCCGCACCGACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS CAA 72 bp AGCTCCCTCTGGGACAAGTGCTGCGGGTTGCCCTGTTaGCGGCGGGACATTGCCCCGGCATCTATTCTGGCA +
Preference number: 6 (lower is better)
Translates to: SSLWDKCCGLPC*RRDIAPASILA
Trigger: TGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 72 bp TGGTCCCGCAGGATGGGGCCCGTCATGCGCAGCAGGTaGAAGGGGTTGCTGTCGCCCAGGAAATTCATGAGC +
Preference number: 6 (lower is better)
Translates to: WSRRMGPVMRSR*KGLLSPRKFMS
Trigger: GCTCATGAATTTCCTGGGCGACAGCAACCCCTTCAACCTGCTGCGCATGACGGGCCCCATCCTGCGGGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 72 bp AAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTaGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTG +
Preference number: 6 (lower is better)
Translates to: KGIWQMSQRYTS*PICPCVFMWRV
Trigger: CACGCGCCACATGAAGACGCACGGGCAGATCGGCAAGGAGGTGTACCGCTGCGACATCTGCCAGATGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS CAA 72 bp CCTGGGTCGGTGCGGGCGCAGACTGGGAGCTATAGATaGCAACGTGAAGATGGCGGAGTCCGGGTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: PGSVRAQTGSYR*QREDGGVRVLW
Trigger: CCAGAGAACCCGGACTCCGCCATCTTCACGTTGCAATCTATAGCTCCCAGTCTGCGCCCGCACCGACCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS CAA 72 bp TGGGCAGGCCTGCACGGCCCTGCAATGTTCTCCTGCTaGGGACAGATGCCTTTCGTGGGTGAGAGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: WAGLHGPAMFSC*GQMPFVGESRW
Trigger: CCACCTGCTCTCACCCACGAAAGGCATCTGTCCCAAGCAGGAGAACATTGCAGGGCCGTGCAGGCCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS TCA 72 bp TCGTGGGTGAGAGCAGGTGGTCATCTTCGTCGGGGGTaGCTTGGATCCCGATCTCCACCGGCTCGGACACTT +
Preference number: 6 (lower is better)
Translates to: SWVRAGGHLRRG*LGSRSPPARTL
Trigger: AAGTGTCCGAGCCGGTGGAGATCGGGATCCAAGTCACCCCCGACGAAGATGACCACCTGCTCTCACCCACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS CCA 72 bp GGTGAGAGCAGGTGGTCATCTTCGTCGGGGGTGACTTaGATCCCGATCTCCACCGGCTCGGACACTTTCCTG +
Preference number: 6 (lower is better)
Translates to: GESRWSSSSGVT*IPISTGSDTFL
Trigger: CAGGAAAGTGTCCGAGCCGGTGGAGATCGGGATCCAAGTCACCCCCGACGAAGATGACCACCTGCTCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS CCA 72 bp CTGGAAGGCTCATCTTTACGGGTGATGAGCTCCCTCTaGGACAAGTGCTGCGGGTTGCCCTGTTTGCGGCGG +
Preference number: 6 (lower is better)
Translates to: LEGSSLRVMSSL*DKCCGLPCLRR
Trigger: CCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACCCGTAAAGATGAGCCTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443726.2
CDS CAA 90 bp TCATCTTTACGGGTGATGAGCTCCCTCTGGGACAAGTGCTGCGGGTaGCCCTGTTTGCGGCGGGACATTGCCCCGGCATCTATTCTGGCA +
Preference number: 6 (lower is better)
Translates to: SSLRVMSSLWDKCCG*PCLRRDIAPASILA
Trigger: TGCCAGAATAGATGCCGGGGCAATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACCCGTAAAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443726.2
CDS CCA 72 bp TGCTTGGGACAGATGCCTTTCGTGGGTGAGAGCAGGTaGTCATCTTCGTCGGGGGTGACTTGGATCCCGATC +
Preference number: 6 (lower is better)
Translates to: CLGQMPFVGESR*SSSSGVTWIPI
Trigger: GATCGGGATCCAAGTCACCCCCGACGAAGATGACCACCTGCTCTCACCCACGAAAGGCATCTGTCCCAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000345514.2
ENST00000357195.8
CDS TCA 72 bp TGTTCTGCGCGTGCTGCAGCAGGAACCACGCGCTGTTaGAGGGCTGCTTGCATGTTGTGCAAATGTAGCTGG +
Preference number: 6 (lower is better)
Translates to: CSARAAAGTTRC*RAACMLCKCSW
Trigger: CCAGCTACATTTGCACAACATGCAAGCAGCCCTTCAACAGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345514.2
ENST00000357195.8
ENST00000443726.2
CDS GCA 72 bp TGCACGGCCCTGCAATGTTCTCCTGCTTGGGACAGATaGCTTTCGTGGGTGAGAGCAGGTGGTCATCTTCGT +
Preference number: 6 (lower is better)
Translates to: CTALQCSPAWDR*LSWVRAGGHLR
Trigger: ACGAAGATGACCACCTGCTCTCACCCACGAAAGGCATCTGTCCCAAGCAGGAGAACATTGCAGGGCCGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS GCA 72 bp CATCTTTACCTGCAATGTTCTCCTGCTTGGGACAGATaGCTTTCGTGGGTGAGAGCAGGTGGTCATCTTCGT +
Preference number: 6 (lower is better)
Translates to: HLYLQCSPAWDR*LSWVRAGGHLR
Trigger: ACGAAGATGACCACCTGCTCTCACCCACGAAAGGCATCTGTCCCAAGCAGGAGAACATTGCAGGTAAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000345514.2
CDS CAA 72 bp GCACTTGCAAATGTCTTCTTGAACTTAAACTGGGTTTaGCACCGGCTCCTGACACTTTCTTTCAGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: ALANVFLNLNWV*HRLLTLSFRVW
Trigger: CCAGACCCTGAAAGAAAGTGTCAGGAGCCGGTGCAAAACCCAGTTTAAGTTCAAGAAGACATTTGCAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357195.8
CDS CAA 90 bp ACACTTCTTCAAACTGCTTGGCCTCTTGCACTTGCAAATGTCTTCTaGAACTTAAACTGGGTTTTGCACCGGCTCCTGACACTTTCTTTC +
Preference number: 6 (lower is better)
Translates to: TLLQTAWPLALANVF*NLNWVLHRLLTLSF
Trigger: GAAAGAAAGTGTCAGGAGCCGGTGCAAAACCCAGTTTAAGTTCAAGAAGACATTTGCAAGTGCAAGAGGCCAAGCAGTTTGAAGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357195.8