RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCL11A (Homo sapiens)

Ensembl gene IDs: ENSG00000119866

Ensembl transcript IDs: ENST00000335712.11, ENST00000356842.9, ENST00000358510.6, ENST00000359629.10, ENST00000409351.5, ENST00000477659.1, ENST00000479026.2, ENST00000489183.1, ENST00000489516.7, ENST00000631857.1, ENST00000642180.1, ENST00000642384.2, ENST00000642439.1, ENST00000642824.1, ENST00000643004.1, ENST00000643222.1, ENST00000643459.1, ENST00000643716.1, ENST00000644606.1, ENST00000645224.1, ENST00000645405.1, ENST00000645455.1, ENST00000646249.1, ENST00000647038.1, ENST00000647469.1, ENST00000647472.1

Found 1540 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGTCCGACTCGCCGGCCACCGAGTCTTCGTCGCAAGTGTCCCTGTaGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCC +
Preference number: 1 (lower is better)
Translates to: RSDSPATESSSQVSL*PSASARWPRLCFSP
Trigger: GGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTGCGACGAAGACTCGGTGGCCGGCGAGTCGGACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR GCA 90 bp TGGAAGGCCTCGCTGAAGTGCTGCATGGAGCTGAGCACCATGCCCTaGATGACGTCGGGCAGGGCGCGGCTCTCGTCGCCCACGCCCACG +
Preference number: 1 (lower is better)
Translates to: WKASLKCCMELSTMP*MTSGRARLSSPTPT
Trigger: CGTGGGCGTGGGCGACGAGAGCCGCGCCCTGCCCGACGTCATGCAGGGCATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR GCA 90 bp CAAGTGTCCCTGTGGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATaGTTCTCGCCCAGGACCTGGTGGAAGGCCTCGCTGAAGTGCTGC +
Preference number: 1 (lower is better)
Translates to: QVSLWPSASARWPRL*FSPRTWWKASLKCC
Trigger: GCAGCACTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR CCA 90 bp GAGTCTTCGTCGCAAGTGTCCCTGTGGCCCTCGGCCTCGGCCAGGTaGCCGCGCTTATGCTTCTCGCCCAGGACCTGGTGGAAGGCCTCG +
Preference number: 1 (lower is better)
Translates to: ESSSQVSLWPSASAR*PRLCFSPRTWWKAS
Trigger: CGAGGCCTTCCACCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTGCGACGAAGACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR CCA 90 bp GCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCCAGGACCTGGTaGAAGGCCTCGCTGAAGTGCTGCATGGAGCTGAGCACCATGCCC +
Preference number: 1 (lower is better)
Translates to: ASARWPRLCFSPRTW*KASLKCCMELSTMP
Trigger: GGGCATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR CCA 90 bp TCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCCAGGACCTaGTGGAAGGCCTCGCTGAAGTGCTGCATGGAGCTGAGCACCATG +
Preference number: 1 (lower is better)
Translates to: SASARWPRLCFSPRT*WKASLKCCMELSTM
Trigger: CATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR GCA 90 bp TTATGCTTCTCGCCCAGGACCTGGTGGAAGGCCTCGCTGAAGTGCTaGATGGAGCTGAGCACCATGCCCTGCATGACGTCGGGCAGGGCG +
Preference number: 1 (lower is better)
Translates to: LCFSPRTWWKASLKC*MELSTMPCMTSGRA
Trigger: CGCCCTGCCCGACGTCATGCAGGGCATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGAGAAGCATAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR GCA 90 bp CGCTTATGCTTCTCGCCCAGGACCTGGTGGAAGGCCTCGCTGAAGTaGTGCATGGAGCTGAGCACCATGCCCTGCATGACGTCGGGCAGG +
Preference number: 1 (lower is better)
Translates to: RLCFSPRTWWKASLK*CMELSTMPCMTSGR
Trigger: CCTGCCCGACGTCATGCAGGGCATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGAGAAGCATAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR TCA 90 bp CAGCCCAAGCTCCTGCCCCTTGCAGTCCTTTGCCCTGTTCAGGGCTaGATGCACCCTCTGAGAGTCTCTGTGACAGTCCTCCCACATCGA +
Preference number: 1 (lower is better)
Translates to: QPKLLPLAVLCPVQG*MHPLRVSVTVLPHR
Trigger: TCGATGTGGGAGGACTGTCACAGAGACTCTCAGAGGGTGCATTCAGCCCTGAACAGGGCAAAGGACTGCAAGGGGCAGGAGCTTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR CCA 90 bp CTTTACAAATACCCTGCGGGGCATATTCTGCACTCATCCCAGGCGTaGGGATTAGAGCTCCATGTGCAGAACGAGGGGAGGAGAGGCCCC +
Preference number: 1 (lower is better)
Translates to: LYKYPAGHILHSSQA*GLELHVQNEGRRGP
Trigger: GGGGCCTCTCCTCCCCTCGTTCTGCACATGGAGCTCTAATCCCCACGCCTGGGATGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
3UTR GCA 90 bp AAAAGGGCCTTGTGTAAAGCCACCTTGCATGTCAGCCCAAGCTCCTaGCCCTTGCAGTCCTTTGCCCTGTTCAGGGCTGAATGCACCCTC +
Preference number: 1 (lower is better)
Translates to: KRALCKATLHVSPSS*PLQSFALFRAECTL
Trigger: GAGGGTGCATTCAGCCCTGAACAGGGCAAAGGACTGCAAGGGGCAGGAGCTTGGGCTGACATGCAAGGTGGCTTTACACAAGGCCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR CCA 90 bp CAGGTACTATGGCAAACTGGCCAAAGAGAAGCGTTGCTAGGAGAATaGACACGGCAGGAAACAGCCTCAGCTTGGCCCAGGAAGAAGCTG +
Preference number: 1 (lower is better)
Translates to: QVLWQTGQREALLGE*TRQETASAWPRKKL
Trigger: CAGCTTCTTCCTGGGCCAAGCTGAGGCTGTTTCCTGCCGTGTCCATTCTCCTAGCAACGCTTCTCTTTGGCCAGTTTGCCATAGTACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR TCA 90 bp AACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTaGGCTCTCTGGGTACTACGCCGAATGGGGGTGTGTGAAGAACCC +
Preference number: 1 (lower is better)
Translates to: NLRALELPSENCHTS*ALWVLRRMGVCEEP
Trigger: GGGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647472.1
3UTR GCA 90 bp CAGGGGAAAGGTGATGGCAAGGAGGCTGCAACCTCCCTTTCTCAGTaGACACATCTGTTGGTAGGAAGAGGCAACTCTGCATGCCTTTAC +
Preference number: 1 (lower is better)
Translates to: QGKGDGKEAATSLSQ*THLLVGRGNSACLY
Trigger: GTAAAGGCATGCAGAGTTGCCTCTTCCTACCAACAGATGTGTGCACTGAGAAAGGGAGGTTGCAGCCTCCTTGCCATCACCTTTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
3UTR TCA 90 bp AACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTaGGCTCTCTGGGTACTACGCCGAATGGGGGTGTGTGAAGAACCT +
Preference number: 1 (lower is better)
Translates to: NLRALELPSENCHTS*ALWVLRRMGVCEEP
Trigger: AGGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479026.2
3UTR GCA 90 bp CCTCACTCCCCACCATGTGGCCCATCACCACATCCGACAAGCAGGTaGACTCCCAGTGTTCAGAACTGGAATTCATTTGTCTTGGAAGAA +
Preference number: 1 (lower is better)
Translates to: PHSPPCGPSPHPTSR*TPSVQNWNSFVLEE
Trigger: TTCTTCCAAGACAAATGAATTCCAGTTCTGAACACTGGGAGTGCACCTGCTTGTCGGATGTGGTGATGGGCCACATGGTGGGGAGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR TCA 90 bp AACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTaGGCTCTCTGGGTACTACGCCGAATGGGGGTGTGTGAAGAACAA +
Preference number: 1 (lower is better)
Translates to: NLRALELPSENCHTS*ALWVLRRMGVCEEQ
Trigger: TTGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR TCA 90 bp TCCAGGTTCCCACTGGGAATTCTCTGGCAGAGACTGATTCAGTTCTaGATAACATGCTGCCAGCCCTATCTGGAAAAGGGTGTGCAAGGC +
Preference number: 1 (lower is better)
Translates to: SRFPLGILWQRLIQF*ITCCQPYLEKGVQG
Trigger: GCCTTGCACACCCTTTTCCAGATAGGGCTGGCAGCATGTTATTCAGAACTGAATCAGTCTCTGCCAGAGAATTCCCAGTGGGAACCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CCA 90 bp AGGAAGTCACAAACAGGCCACTCGTGCAATCAGGGTTATTTGTCATaGAAAAGCCACAGGGGAAAGGTGATGGCAAGGAGGCTGCAACCT +
Preference number: 1 (lower is better)
Translates to: RKSQTGHSCNQGYLS*KSHRGKVMARRLQP
Trigger: AGGTTGCAGCCTCCTTGCCATCACCTTTCCCCTGTGGCTTTTCCATGACAAATAACCCTGATTGCACGAGTGGCCTGTTTGTGACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646249.1
3UTR CCA 90 bp ACCCCTAAGGAGGCCTGGCCAGATGTTCTGAGTCAAACAAGTCATTaGCTGAACTGCAAATGCCTATATGGCCACTTTGCCTCTGACACG +
Preference number: 1 (lower is better)
Translates to: TPKEAWPDVLSQTSH*LNCKCLYGHFASDT
Trigger: CGTGTCAGAGGCAAAGTGGCCATATAGGCATTTGCAGTTCAGCCAATGACTTGTTTGACTCAGAACATCTGGCCAGGCCTCCTTAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CCA 90 bp ATGGTGAACGGGTCATGCAGACATCAGCTGACATTCAGAAAGTTGTaGTGTCCACCCACCACCACCATCCCACCCCAGTTATTAGAGAGT +
Preference number: 1 (lower is better)
Translates to: MVNGSCRHQLTFRKL*CPPTTTIPPQLLES
Trigger: ACTCTCTAATAACTGGGGTGGGATGGTGGTGGTGGGTGGACACCACAACTTTCTGAATGTCAGCTGATGTCTGCATGACCCGTTCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 90 bp GAGAGGAGCAAGGTCTGGTTTACTTCTGAGGAGTGCAAATCCTGTTaGTTGAGATTTGCCTTTCTGATTTCCTCCATTCGGCACCAGCCG +
Preference number: 1 (lower is better)
Translates to: ERSKVWFTSEECKSC*LRFAFLISSIRHQP
Trigger: CGGCTGGTGCCGAATGGAGGAAATCAGAAAGGCAAATCTCAAGCAACAGGATTTGCACTCCTCAGAAGTAAACCAGACCTTGCTCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR TCA 90 bp GCTCCACTGCTAGACCCAAAAGCTCTCTGCTGTGGGGATTTCATTTaGACTGCTATCGAAGAATATTCCAAGAACCTCTCTCCGCACCCT +
Preference number: 1 (lower is better)
Translates to: APLLDPKALCCGDFI*TAIEEYSKNLSPHP
Trigger: AGGGTGCGGAGAGAGGTTCTTGGAATATTCTTCGATAGCAGTTCAAATGAAATCCCCACAGCAGAGAGCTTTTGGGTCTAGCAGTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR TCA 90 bp GTGTGGAATCAATTATGCATGCAGTTGGCCGGAGACCAAAGGCTGTaGAGTCGGAGAGGGCAGAATCGCTCGACACACACAAATAAAAAG +
Preference number: 1 (lower is better)
Translates to: VWNQLCMQLAGDQRL*SRRGQNRSTHTNKK
Trigger: CTTTTTATTTGTGTGTGTCGAGCGATTCTGCCCTCTCCGACTTCACAGCCTTTGGTCTCCGGCCAACTGCATGCATAATTGATTCCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 90 bp ACTGCTAGACCCAAAAGCTCTCTGCTGTGGGGATTTCATTTGAACTaGTATCGAAGAATATTCCAAGAACCTCTCTCCGCACCCTTCTCC +
Preference number: 1 (lower is better)
Translates to: TARPKSSLLWGFHLN*YRRIFQEPLSAPFS
Trigger: GGAGAAGGGTGCGGAGAGAGGTTCTTGGAATATTCTTCGATAGCAGTTCAAATGAAATCCCCACAGCAGAGAGCTTTTGGGTCTAGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CCA 90 bp GCCTATATGGCCACTTTGCCTCTGACACGTCACCAAGGCTGGAAATaGACAATGGAAGCTGGACTAGGTGTAGTAAAGCTCAATACTTCA +
Preference number: 1 (lower is better)
Translates to: AYMATLPLTRHQGWK*TMEAGLGVVKLNTS
Trigger: TGAAGTATTGAGCTTTACTACACCTAGTCCAGCTTCCATTGTCCATTTCCAGCCTTGGTGACGTGTCAGAGGCAAAGTGGCCATATAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CCA 90 bp GCAAATGCCTATATGGCCACTTTGCCTCTGACACGTCACCAAGGCTaGAAATGGACAATGGAAGCTGGACTAGGTGTAGTAAAGCTCAAT +
Preference number: 1 (lower is better)
Translates to: ANAYMATLPLTRHQG*KWTMEAGLGVVKLN
Trigger: ATTGAGCTTTACTACACCTAGTCCAGCTTCCATTGTCCATTTCCAGCCTTGGTGACGTGTCAGAGGCAAAGTGGCCATATAGGCATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CCA 90 bp ACATCACGCAAGTGTTACTCCATATTTGGTGATTTAGCAAGGCTTTaGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTC +
Preference number: 1 (lower is better)
Translates to: TSRKCYSIFGDLARL*ISEDDKSPSACSCF
Trigger: GAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATCACCAAATATGGAGTAACACTTGCGTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CCA 90 bp GTCCCAGCTTACCGCTCCACTGCTAGACCCAAAAGCTCTCTGCTGTaGGGATTTCATTTGAACTGCTATCGAAGAATATTCCAAGAACCT +
Preference number: 1 (lower is better)
Translates to: VPAYRSTARPKSSLL*GFHLNCYRRIFQEP
Trigger: AGGTTCTTGGAATATTCTTCGATAGCAGTTCAAATGAAATCCCCACAGCAGAGAGCTTTTGGGTCTAGCAGTGGAGCGGTAAGCTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 90 bp AGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTaGTTCATTAATCATGCCTTACACTTCTGTTCATTTTCCTTCCAG +
Preference number: 1 (lower is better)
Translates to: RLWISEDDKSPSACS*FINHALHFCSFSFQ
Trigger: CTGGAAGGAAAATGAACAGAAGTGTAAGGCATGATTAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR GCA 90 bp TTCCTCAATTCACTAAAGGAAACTTGGCAAGAAGATGCATCATTTTaGTCCTTTCTACTGGGGCATCTGAGGAGGAGAGCCACTGAGGCA +
Preference number: 1 (lower is better)
Translates to: FLNSLKETWQEDASF*SFLLGHLRRRATEA
Trigger: TGCCTCAGTGGCTCTCCTCCTCAGATGCCCCAGTAGAAAGGAGCAAAATGATGCATCTTCTTGCCAAGTTTCCTTTAGTGAATTGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 90 bp CAATTACATCAAGAAAATGATAGTGCGTGTGGAATCAATTATGCATaGAGTTGGCCGGAGACCAAAGGCTGTGAAGTCGGAGAGGGCAGA +
Preference number: 1 (lower is better)
Translates to: QLHQENDSACGINYA*SWPETKGCEVGEGR
Trigger: TCTGCCCTCTCCGACTTCACAGCCTTTGGTCTCCGGCCAACTGCATGCATAATTGATTCCACACGCACTATCATTTTCTTGATGTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 90 bp TTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTaGTCTTGCTTCATTAATCATGCCTTACACTTCTGTTCATTTTCC +
Preference number: 1 (lower is better)
Translates to: LARLWISEDDKSPSA*SCFINHALHFCSFS
Trigger: GGAAAATGAACAGAAGTGTAAGGCATGATTAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR GCA 90 bp ATGGTAATTTATCAAAAACAGCCCAGAGTCGCTCATAGGCAATACTaGATAGTCCTCCAACAGAACAGATTAACACGAGTCCCTCCACCC +
Preference number: 1 (lower is better)
Translates to: MVIYQKQPRVAHRQY*IVLQQNRLTRVPPP
Trigger: GGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAGGACTATGCAGTATTGCCTATGAGCGACTCTGGGCTGTTTTTGATAAATTACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR TCA 90 bp AATACTTCTTTCCATCTGGGTCATGTTTTGGAGGATCCCTTCCAGTaGGGTTCAAGACTGAAGCTGCCAAGAAAAGCTTCAGAGAATCAC +
Preference number: 1 (lower is better)
Translates to: NTSFHLGHVLEDPFQ*GSRLKLPRKASENH
Trigger: GTGATTCTCTGAAGCTTTTCTTGGCAGCTTCAGTCTTGAACCTCACTGGAAGGGATCCTCCAAAACATGACCCAGATGGAAAGAAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR GCA 90 bp ATGTGCCACATTTTAACATTTATTAGAAAGGATAGGATGCAGAGCTaGATGGAACCCACATCCACAACCATCTGTATGAGCCACAGGTCC +
Preference number: 1 (lower is better)
Translates to: MCHILTFIRKDRMQS*MEPTSTTICMSHRS
Trigger: GGACCTGTGGCTCATACAGATGGTTGTGGATGTGGGTTCCATGCAGCTCTGCATCCTATCCTTTCTAATAAATGTTAAAATGTGGCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CCA 90 bp AACCCAGGTGAAAGCAAGAAAGTATATGTTAAGTCCTATCTCAGCTaGTGTGCAAGTCAGACTGAGAATAACAGCTTCGAAAGGCCACGT +
Preference number: 1 (lower is better)
Translates to: NPGESKKVYVKSYLS*CASQTENNSFERPR
Trigger: ACGTGGCCTTTCGAAGCTGTTATTCTCAGTCTGACTTGCACACCAGCTGAGATAGGACTTAACATATACTTTCTTGCTTTCACCTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CCA 90 bp GAGTATCGTGGGAACCTGGATTTGCAGGCTTTCCAATTACTAGTCTaGAGAAGAATCCTTTGCTTGAATGCTAACTCACACCTTGCTAAC +
Preference number: 1 (lower is better)
Translates to: EYRGNLDLQAFQLLV*RRILCLNANSHLAN
Trigger: GTTAGCAAGGTGTGAGTTAGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATCCAGGTTCCCACGATACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 90 bp CTGGAATTCATTTGTCTTGGAAGAAAGTGTTCTCCTGGACGGTTCTaGACAGAATTCATTCACAGAGCATGTCTTGGATATACAGCTGAC +
Preference number: 1 (lower is better)
Translates to: LEFICLGRKCSPGRF*TEFIHRACLGYTAD
Trigger: GTCAGCTGTATATCCAAGACATGCTCTGTGAATGAATTCTGTGCAGAACCGTCCAGGAGAACACTTTCTTCCAAGACAAATGAATTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR GCA 90 bp AGACTTCTAATTCCTCAATTCACTAAAGGAAACTTGGCAAGAAGATaGATCATTTTGCTCCTTTCTACTGGGGCATCTGAGGAGGAGAGC +
Preference number: 1 (lower is better)
Translates to: RLLIPQFTKGNLARR*IILLLSTGASEEES
Trigger: GCTCTCCTCCTCAGATGCCCCAGTAGAAAGGAGCAAAATGATGCATCTTCTTGCCAAGTTTCCTTTAGTGAATTGAGGAATTAGAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 90 bp CAAACTAGGTCGGAGAGACAAGTTCCAGTGAATCAATTCATGATATaGACTACCTTTCCTAAAACTGAACAAACCTCTTGCCTTTCGGGA +
Preference number: 1 (lower is better)
Translates to: QTRSERQVPVNQFMI*TTFPKTEQTSCLSG
Trigger: TCCCGAAAGGCAAGAGGTTTGTTCAGTTTTAGGAAAGGTAGTGCATATCATGAATTGATTCACTGGAACTTGTCTCTCCGACCTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CCA 90 bp GTGTTCAGAACTGGAATTCATTTGTCTTGGAAGAAAGTGTTCTCCTaGACGGTTCTGCACAGAATTCATTCACAGAGCATGTCTTGGATA +
Preference number: 1 (lower is better)
Translates to: VFRTGIHLSWKKVFS*TVLHRIHSQSMSWI
Trigger: TATCCAAGACATGCTCTGTGAATGAATTCTGTGCAGAACCGTCCAGGAGAACACTTTCTTCCAAGACAAATGAATTCCAGTTCTGAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR GCA 90 bp CTGGATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTaGTTGAATGCTAACTCACACCTTGCTAACCTCCTGACATTTAAA +
Preference number: 1 (lower is better)
Translates to: LDLQAFQLLVWRRIL*LNANSHLANLLTFK
Trigger: TTTAAATGTCAGGAGGTTAGCAAGGTGTGAGTTAGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CCA 90 bp AATCAAGACTTTGTAATTATTCATGCACGAAAGGTTTACCTCACCTaGGTCACAGCACTTGTTGTGCGCCCATTGAATATCTTAGACATC +
Preference number: 1 (lower is better)
Translates to: NQDFVIIHARKVYLT*VTALVVRPLNILDI
Trigger: GATGTCTAAGATATTCAATGGGCGCACAACAAGTGCTGTGACCCAGGTGAGGTAAACCTTTCGTGCATGAATAATTACAAAGTCTTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CCA 90 bp TCCTGCCATCAAACTGCTAACAATAAAACTGCCCTGCAATGTTCGTaGGGAACAGAAACAGGCAATACATATTTCTCTATGTATCTGGAA +
Preference number: 1 (lower is better)
Translates to: SCHQTANNKTALQCS*GTETGNTYFSMYLE
Trigger: TTCCAGATACATAGAGAAATATGTATTGCCTGTTTCTGTTCCCCACGAACATTGCAGGGCAGTTTTATTGTTAGCAGTTTGATGGCAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 90 bp TCTATGTTAAGTGTATTCTGTTTCCATTCACAGCGCTTGCAATGTTaGGTCCAAGTAAGTAAGCTCAATAGTCAAGTAAATGGCTGGCAA +
Preference number: 1 (lower is better)
Translates to: SMLSVFCFHSQRLQC*VQVSKLNSQVNGWQ
Trigger: TTGCCAGCCATTTACTTGACTATTGAGCTTACTTACTTGGACGCAACATTGCAAGCGCTGTGAATGGAAACAGAATACACTTAACATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR CCA 90 bp GTTCGTGGGGAACAGAAACAGGCAATACATATTTCTCTATGTATCTaGAAGTGCCTCAATCATATACTTAAATTTTACAGTCTTCTCCCC +
Preference number: 1 (lower is better)
Translates to: VRGEQKQAIHISLCI*KCLNHILKFYSLLP
Trigger: GGGGAGAAGACTGTAAAATTTAAGTATATGATTGAGGCACTTCCAGATACATAGAGAAATATGTATTGCCTGTTTCTGTTCCCCACGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CCA 90 bp TTTCAGCATTCTTGCAACTTTTCCCTTAAGTATAGACCTGTAAACTaGGAAAATTGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTT +
Preference number: 1 (lower is better)
Translates to: FQHSCNFSLKYRPVN*ENCTVHLIVLSEQV
Trigger: AACCTGCTCAGATAGGACAATTAAGTGCACTGTACAATTTTCCCAGTTTACAGGTCTATACTTAAGGGAAAAGTTGCAAGAATGCTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR TCA 90 bp TACAATTACACCATAAGGTACACAAATACATCCTCCAGTTCAGTCTaGGCTAGGAGAGAATCAGAATGGATACAAAAAGAAAAGGTAAGT +
Preference number: 1 (lower is better)
Translates to: YNYTIRYTNTSSSSV*ARRESEWIQKEKVS
Trigger: ACTTACCTTTTCTTTTTGTATCCATTCTGATTCTCTCCTAGCTCAGACTGAACTGGAGGATGTATTTGTGTACCTTATGGTGTAATTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR GCA 90 bp GCGCCCCGCGAGCTGTTCTCGTGGTGGCGCGCCGCCTCCAGGCTCAGCCCGAAGGTGTGGCTGCGCCGGTaGACCACCAGGTTGCTCCGC +
Preference number: 2 (lower is better)
Translates to: APRELFSWWRAASRLSPKVWLRR*TTRLLR
Trigger: GCGGAGCAACCTGGTGGTGCACCGGCGCAGCCACAC...CTTCGGGCTGAGCCTGGAGGCGGCGCGCCACCACGAGAACAGCTCGCGGGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR GCA 90 bp CCCTGTGGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCCAGGAGCGCGCTGCTGGCGCTaGCCACCAAGTCGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: PCGPRPRPGGRAYASRPGARCWR*PPSRWC
Trigger: GCACCAGCGACTTGGTGGGCAGCGCCAGCAGCGCGC...TCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR CCA 90 bp CAAGTGTCCCTGTGGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCGGGTTCCGGGGAGCTaGCGGTGGAGAGACCGTCGT +
Preference number: 2 (lower is better)
Translates to: QVSLWPSASARWPRLCFSRVPGS*RWRDRR
Trigger: ACGACGGTCTCTCCACCGCCAGCTCCCCGGAACCCG...CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR CAA 90 bp TCCTCGTCCCCGTTCTCCGGGATCAGGTTGGGGTCGTTCTCGCTCTaGAACTTGGCCACCACGGACTTGAGCGCGCTGCTGGCGCTGCCC +
Preference number: 2 (lower is better)
Translates to: SSSPFSGIRLGSFSL*NLATTDLSALLALP
Trigger: GGGCAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCCCAACCTGATCCCGGAGAACGGGGACGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR CAA 90 bp ATCAGGTTGGGGTCGTTCTCGCTCTTGAACTTGGCCACCACGGACTaGAGCGCGCTGCTGGCGCTGCCCACCAAGTCGCTGGTGCCGGGT +
Preference number: 2 (lower is better)
Translates to: IRLGSFSLLNLATTD*SALLALPTKSLVPG
Trigger: ACCCGGCACCAGCGACTTGGTGGGCAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCCCAACCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR CAA 90 bp TCCCCGTTCTCCGGGATCAGGTTGGGGTCGTTCTCGCTCTTGAACTaGGCCACCACGGACTTGAGCGCGCTGCTGGCGCTGCCCACCAAG +
Preference number: 2 (lower is better)
Translates to: SPFSGIRLGSFSLLN*ATTDLSALLALPTK
Trigger: CTTGGTGGGCAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCCCAACCTGATCCCGGAGAACGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR GCA 90 bp GCGCCCCGCGAGCTGTTCTCGTGGTGGCGCGCCGCCTCCAGGCTCAGCCCGAAGGTGTTCTGTGCGTGTTaGAAGAGAAACCATGCACTG +
Preference number: 2 (lower is better)
Translates to: APRELFSWWRAASRLSPKVFCAC*KRNHAL
Trigger: CAGTGCATGGTTTCTCTTGCAACACGCACAGAACAC...CTTCGGGCTGAGCCTGGAGGCGGCGCGCCACCACGAGAACAGCTCGCGGGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR GCA 90 bp CAAGTGTCCCTGTGGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGAAGGCCTCGCTGAAGTaGTGCATGGAGCTGAGCACC +
Preference number: 2 (lower is better)
Translates to: QVSLWPSASARWPRLCFSKASLK*CMELST
Trigger: GGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTT...CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR TCA 90 bp GGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCCAGGGCATCACTCATaGCAGCGATGGTCCACGGGC +
Preference number: 2 (lower is better)
Translates to: GWFQKGQGITHDSDGPRAPGHHS*QRWSTG
Trigger: GCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGG...GGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR TCA 90 bp CAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGCCAGGGCATCACTCATaGCAGCGATGGTCCACGGGC +
Preference number: 2 (lower is better)
Translates to: QKGQGITHDSDGPRALSMPGHHS*QRWSTG
Trigger: GCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGG...CATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR TCA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACGATGACAGACCACGCTaGCGTCGACTGGGCGGCACG +
Preference number: 2 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYDDRPR*RRLGGT
Trigger: CGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR TCA 90 bp GGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 2 (lower is better)
Translates to: GWFQKGQGITHDSDGPRAHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...GGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR GCA 90 bp GAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGTGAAGAACAAGTGTCGCTGCAGGTGGCCGCGCTTATaGTTCTCGCCCAGGACCTGG +
Preference number: 2 (lower is better)
Translates to: ELSGYYAEWGCVKNKCRCRWPRL*FSPRTW
Trigger: CCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCT...GCAGCGACACTTGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR CCA 90 bp CCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCCAGGACCTGGTGGAAGGCCTGGTACTATGGCAAACTaGCCAAAGAGAAGCGTTGCT +
Preference number: 2 (lower is better)
Translates to: PRPGGRAYASRPGPGGRPGTMAN*PKRSVA
Trigger: AGCAACGCTTCTCTTTGGCCAGTTTGCCATAGTACC...AGGCCTTCCACCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR TCA 90 bp CATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGCCGAATGGGGGTGTGTaGAGAACCCGCGGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: HLLPISQICSSYPPDGCLPNGGV*RTRGVR
Trigger: CCTGACCCCGCGGGTTCTTCACACACCCCCATTCGG...CAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647472.1
3UTR-3UTR GCA 90 bp CCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCCAGGACCTGGTGGAAGGCCTTCCATGAGTGTTCTGTaGGTGTTGCAAGAGAAACCA +
Preference number: 2 (lower is better)
Translates to: PRPGGRAYASRPGPGGRPSMSVL*VLQEKP
Trigger: TGGTTTCTCTTGCAACACGCACAGAACACTCATGGA...AGGCCTTCCACCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR GCA 90 bp TCTGGGTACTACGCCGAATGGGGGTGTGTGAAGAACAAGTGTCGCTGCGTCTGCTCAGCGAGCTGGGGCTaGCCAGCAGCAGCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: SGYYAEWGCVKNKCRCVCSASWG*PAAAFW
Trigger: CCAAAAAGCTGCTGCTGGGCAGCCCCAGCTCGCTGA...GCAGACGCAGCGACACTTGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR CCA 90 bp CAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACACGCTGACGTCGACTaGGCGGCACGCGTCCACCCC +
Preference number: 2 (lower is better)
Translates to: QDSVFAQRLLGGYCQKTSHADVD*AARVHP
Trigger: GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTG...TGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CCA 90 bp AGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGCTGCAGGCCTAGGCTaGAAGGACTCTGCAGGACTC +
Preference number: 2 (lower is better)
Translates to: RLAGFRRARASLMTAMVHAAGLG*KDSAGL
Trigger: GAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGC...GTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CCA 90 bp CCCTGTGGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCCAGGATTATCTCAGGTACTATaGCAAACTGGCCAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: PCGPRPRPGGRAYASRPGLSQVL*QTGQRE
Trigger: TTCTCTTTGGCCAGTTTGCCATAGTACCTGAGATAA...TCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR TCA 90 bp TTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTGCACCATGCCCTGCATaGCGTCGGGCAGGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: FSQNLRALELPSENCHTSAPCPA*RRAGRG
Trigger: GCCGCGCCCTGCCCGACGTCATGCAGGGCATGGTGC...AGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR GCA 90 bp CAAACTCCCGTTCTCCGAGGAGTGCTCCGACGAGGAGGCAAAAGGCGATTGTCTGCCTCGCTGAAGTGCTaGATGGAGCTGAGCACCATG +
Preference number: 2 (lower is better)
Translates to: QTPVLRGVLRRGGKRRLSASLKC*MELSTM
Trigger: CATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGC...AGACAATCGCCTTTTGCCTCCTCGTCGGAGCACTCCTCGGAGAACGGGAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR CCA 90 bp GCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGCACGCTGACGTCGACTaGGCGGCACGCGTCCACCCC +
Preference number: 2 (lower is better)
Translates to: AQRLLGGYCQKTSQTSRMHADVD*AARVHP
Trigger: GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTG...CATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
3UTR CAA 90 bp ACTCCCGTTCTCCGAGGAGTGCTCCGACGAGGAGGCAAAAGGCGATaGTCTGGAGTCTCCGAAGCTAAGGAAGGGATCTTTGAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: TPVLRGVLRRGGKRR*SGVSEAKEGIFELP
Trigger: AGGCAGCTCAAAGATCCCTTCCTTAGCTTCGGAGACTCCAGACAATCGCCTTTTGCCTCCTCGTCGGAGCACTCCTCGGAGAACGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR GCA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCAC +
Preference number: 2 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYRLEGL*RTLSSH
Trigger: GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CCA 90 bp AAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTGAGCTCTCTGGGTTTCTCGCCCAGGACCTaGTGGAAGGCCTCGCTGAAG +
Preference number: 2 (lower is better)
Translates to: KGSRASIRKLPHILSSLGFSPRT*WKASLK
Trigger: CTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGAGAA...ACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR TCA 90 bp ATAAAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 2 (lower is better)
Translates to: IKWRCRPRLEGLCRTLSSHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...CGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR TCA 90 bp TCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGACCAGGGCATCACTCATaGCAGCGATGGTCCACGGGC +
Preference number: 2 (lower is better)
Translates to: SNLFLLPTRWVSVGNRYRPGHHS*QRWSTG
Trigger: GCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGG...TCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR TCA 90 bp GAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGTGAAGAACAAGTGTCGCTGCAACTGCCACACATCTTaGGCTCTCTGGGTACTACGC +
Preference number: 2 (lower is better)
Translates to: ELSGYYAEWGCVKNKCRCNCHTS*ALWVLR
Trigger: GCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTT...GCAGCGACACTTGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR GCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTGTGCAGGCAGCAGGCTaGCCCAAGCAGATAGGAGGG +
Preference number: 2 (lower is better)
Translates to: HQPHLIHGERVMQTSADIVQAAG*PKQIGG
Trigger: CCCTCCTATCTGCTTGGGGCAGCCTGCTGCCTGCAC...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAGCTGCCAGCCCTATCTaGAAAAGGGTGTGCAAGGCG +
Preference number: 2 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTAASPI*KRVCKA
Trigger: CGCCTTGCACACCCTTTTCCAGATAGGGCTGGCAGC...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR TCA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGCCAGGGCATCACTCATaGCAGCGATGGTCCACGGGC +
Preference number: 2 (lower is better)
Translates to: TIQVIRLAGFRRARASLMPGHHS*QRWSTG
Trigger: GCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGG...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR GCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAATCTGGAAAAGGGTGTaGAAGGCGCCTTCTCGCCTC +
Preference number: 2 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTIWKRV*KAPSRL
Trigger: GAGGCGAGAAGGCGCCTTGCACACCCTTTTCCAGAT...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CCA 90 bp TCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAGCTGCAGGCCTAGGCTaGAAGGACTCTGCAGGACTC +
Preference number: 2 (lower is better)
Translates to: SNLFLLPTRWVSVGNRYRAAGLG*KDSAGL
Trigger: GAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGC...TCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CCA 90 bp AAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTGAGCTCTCTGGGTCACTCATCCCAGGCGTaGGGATTAGAGCTCCATGTG +
Preference number: 2 (lower is better)
Translates to: KGSRASIRKLPHILSSLGHSSQA*GLELHV
Trigger: CACATGGAGCTCTAATCCCCACGCCTGGGATGAGTG...ACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
3UTR CAA 90 bp GATGGCAAGGAGGCTGCAACCTCCCTTTCTCAGTGCACACATCTGTaGGTAGGAAGAGGCAACTCTGCATGCCTTTACCAAAGGCCATCC +
Preference number: 2 (lower is better)
Translates to: DGKEAATSLSQCTHL*VGRGNSACLYQRPS
Trigger: GGATGGCCTTTGGTAAAGGCATGCAGAGTTGCCTCTTCCTACCAACAGATGTGTGCACTGAGAAAGGGAGGTTGCAGCCTCCTTGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646249.1
3UTR-3UTR CCA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGGCTGCAGGCCTAGGCTaGAAGGACTCTGCAGGACTC +
Preference number: 2 (lower is better)
Translates to: TIQVIRLAGFRRARASLMAAGLG*KDSAGL
Trigger: GAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGC...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CCA 90 bp TACATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCCACTCATCCCAGGCGTaGGGATTAGAGCTCCATGTG +
Preference number: 2 (lower is better)
Translates to: YISCPFLKSVPPTHPMGVHSSQA*GLELHV
Trigger: CACATGGAGCTCTAATCCCCACGCCTGGGATGAGTG...GACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647472.1
3UTR CAA 90 bp AGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTaGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATG +
Preference number: 2 (lower is better)
Translates to: RGWGLMRISTIQVIR*AGFRRARASLMTAM
Trigger: CATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR CAA 90 bp TTCAGAGAATCACACTCTCTAAAAAGGGCCTTGTGTAAAGCCACCTaGCATGTCAGCCCAAGCTCCTGCCCCTTGCAGTCCTTTGCCCTG +
Preference number: 2 (lower is better)
Translates to: FRESHSLKRALCKAT*HVSPSSCPLQSFAL
Trigger: CAGGGCAAAGGACTGCAAGGGGCAGGAGCTTGGGCTGACATGCAAGGTGGCTTTACACAAGGCCCTTTTTAGAGAGTGTGATTCTCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR CAA 90 bp TCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTCAGAAAGTaGTGGTGTCCACCCACCACCACCATCCCACCCCAGTTATTAGAG +
Preference number: 2 (lower is better)
Translates to: SMVNGSCRHQLTFRK*WCPPTTTIPPQLLE
Trigger: CTCTAATAACTGGGGTGGGATGGTGGTGGTGGGTGGACACCACAACTTTCTGAATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR TCA 90 bp AATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTCACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 2 (lower is better)
Translates to: NLFLLPTRWVSVGNRYRSHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...ACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR GCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAGATAGGATGCAGAGCTaGATGGAACCCACATCCACA +
Preference number: 2 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTDRMQS*MEPTST
Trigger: TGTGGATGTGGGTTCCATGCAGCTCTGCATCCTATC...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CCA 90 bp GCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGGGGTACTACGCCGAATaGGGGTGTGTGAAGAACCCG +
Preference number: 2 (lower is better)
Translates to: AQRLLGGYCQKTSQTSRMGYYAE*GCVKNP
Trigger: CGGGTTCTTCACACACCCCCATTCGGCGTAGTACCC...CATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647472.1
3UTR CAA 90 bp AGAAGTTTATCTCAGGTACTATGGCAAACTGGCCAAAGAGAAGCGTaGCTAGGAGAATGGACACGGCAGGAAACAGCCTCAGCTTGGCCC +
Preference number: 2 (lower is better)
Translates to: RSLSQVLWQTGQREA*LGEWTRQETASAWP
Trigger: GGGCCAAGCTGAGGCTGTTTCCTGCCGTGTCCATTCTCCTAGCAACGCTTCTCTTTGGCCAGTTTGCCATAGTACCTGAGATAAACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR TCA 90 bp GCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGCACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 2 (lower is better)
Translates to: AQRLLGGYCQKTSQTSRMHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...CATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR TCA 90 bp TTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAACACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 2 (lower is better)
Translates to: FLLPTRWVSVGNRYRSTKHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...TTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR GCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCAC +
Preference number: 2 (lower is better)
Translates to: LCLRTTASWRLLSENITNRLEGL*RTLSSH
Trigger: GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR GCA 90 bp GGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCAC +
Preference number: 2 (lower is better)
Translates to: GWGLMRISTIQVIRLAGFRLEGL*RTLSSH
Trigger: GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT...GAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR GCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACACTTATCCTTGGGCCCTaGTCAGAAATGTGCCACATT +
Preference number: 2 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTLILGP*SEMCHI
Trigger: AATGTGGCACATTTCTGAGCAGGGCCCAAGGATAAG...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACACCACTGGGAATTCTCTaGCAGAGACTGATTCAGTTC +
Preference number: 2 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTPLGIL*QRLIQF
Trigger: GAACTGAATCAGTCTCTGCCAGAGAATTCCCAGTGG...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTGGATGCAGAGCTGCATaGAACCCACATCCACAACCA +
Preference number: 2 (lower is better)
Translates to: HQPHLIHGERVMQTSADIGCRAA*NPHPQP
Trigger: TGGTTGTGGATGTGGGTTCCATGCAGCTCTGCATCC...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CAA 90 bp CGCTCCACTGCTAGACCCAAAAGCTCTCTGCTGTGGGGATTTCATTaGAACTGCTATCGAAGAATATTCCAAGAACCTCTCTCCGCACCC +
Preference number: 2 (lower is better)
Translates to: RSTARPKSSLLWGFH*NCYRRIFQEPLSAP
Trigger: GGGTGCGGAGAGAGGTTCTTGGAATATTCTTCGATAGCAGTTCAAATGAAATCCCCACAGCAGAGAGCTTTTGGGTCTAGCAGTGGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR GCA 90 bp TGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCAC +
Preference number: 2 (lower is better)
Translates to: WGLMRISTIQVIRLAGFRRLEGL*RTLSSH
Trigger: GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT...TCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CCA 90 bp ATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATGCTGCAGGCCTAGGCTaGAAGGACTCTGCAGGACTC +
Preference number: 2 (lower is better)
Translates to: MYRNKGLGTHAHFHNTGNAAGLG*KDSAGL
Trigger: GAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGC...ATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CCA 90 bp TCAGGGCTGAATGCACCCTCTGAGAGTCTCTGTGACAGTCCTCCCACATCGACTAAGAAAGTGTTCTCCTaGACGGTTCTGCACAGAATT +
Preference number: 2 (lower is better)
Translates to: SGLNAPSESLCDSPPTSTKKVFS*TVLHRI
Trigger: AATTCTGTGCAGAACCGTCCAGGAGAACACTTTCTT...AGTCGATGTGGGAGGACTGTCACAGAGACTCTCAGAGGGTGCATTCAGCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR-3UTR CCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAGTACAGGAACAGACTTaGCACATAGTGCTTTGTGCT +
Preference number: 2 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTVQEQT*HIVLCA
Trigger: AGCACAAAGCACTATGTGCCAAGTCTGTTCCTGTAC...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CAA 90 bp ATTGATAGGAAGTCACAAACAGGCCACTCGTGCAATCAGGGTTATTaGTCATGGAAAAGCCACAGGGGAAAGGTGATGGCAAGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: IDRKSQTGHSCNQGY*SWKSHRGKVMARRL
Trigger: CAGCCTCCTTGCCATCACCTTTCCCCTGTGGCTTTTCCATGACAAATAACCCTGATTGCACGAGTGGCCTGTTTGTGACTTCCTATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646249.1
3UTR-3UTR TCA 90 bp ACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTCCCTCTCTATGGGACTaGTTCACTGTTCCAATGTGG +
Preference number: 2 (lower is better)
Translates to: TRGWGLMRISTIQVIRLAPSLWD*FTVPMW
Trigger: CCACATTGGAACAGTGAATCAGTCCCATAGAGAGGG...AGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR TCA 90 bp GGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGAACTGCCACACATCTTaGGCTCTCTGGGTACTACGC +
Preference number: 2 (lower is better)
Translates to: GLMRISTIQVIRLAGFRRNCHTS*ALWVLR
Trigger: GCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTT...CCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479026.2
ENST00000647472.1
3UTR-3UTR GCA 90 bp ATCAGTCCCCAAGTCCACATCTTCCAGCTCCAACCACCACAGCTCACAGTCATTTCTCCTGGACGGTTCTaGACAGAATTCATTCACAGA +
Preference number: 2 (lower is better)
Translates to: ISPQVHIFQLQPPQLTVISPGRF*TEFIHR
Trigger: TCTGTGAATGAATTCTGTGCAGAACCGTCCAGGAGA...AATGACTGTGAGCTGTGGTGGTTGGAGCTGGAAGATGTGGACTTGGGGACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR-3UTR GCA 90 bp CACATCTTCCAGCTCCAACCACCACAGCTCACAGTCATTCTTGTCTTCTGTAACTGTGTAAAGCCACCTTaGATGTCAGCCCAAGCTCCT +
Preference number: 2 (lower is better)
Translates to: HIFQLQPPQLTVILVFCNCVKPP*MSAQAP
Trigger: AGGAGCTTGGGCTGACATGCAAGGTGGCTTTACACA...GTTACAGAAGACAAGAATGACTGTGAGCTGTGGTGGTTGGAGCTGGAAGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR-3UTR CCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAAAATCCTACAGGGAGTaGGGCTGGAGGGCGATGGGG +
Preference number: 2 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVKSYRE*GWRAMG
Trigger: CCCCATCGCCCTCCAGCCCCACTCCCTGTAGGATTT...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR CCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACCGCACAACGGCTTCTTaGAGGCTACTGTCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: LCLRTTASWRLLSENITNRTTAS*RLLSEN
Trigger: GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCG...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CCA 90 bp AACATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATAGCTGCAGGCCTAGGCTaGAAGGACTCTGCAGGACTC +
Preference number: 2 (lower is better)
Translates to: NIECIETRGWGLMRISTIAAGLG*KDSAGL
Trigger: GAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGC...TATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CCA 90 bp AGACTTGGAATTGTGCAGACGTGCTTTAGAGAAATGGGCTGGGGGTACACACACCACCAAGGCTGGAAATaGACAATGGAAGCTGGACTA +
Preference number: 2 (lower is better)
Translates to: RLGIVQTCFREMGWGYTHHQGWK*TMEAGL
Trigger: TAGTCCAGCTTCCATTGTCCATTTCCAGCCTTGGTG...GTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACGTCTGCACAATTCCAAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CCA 90 bp ATTTTCCTTCCAGTCACAAGACAACACATGGAAATGGTCATTCCCACATCCTGCCTGCCCTCTCTACTCTaGCCTGGCCAGTCGAAAATG +
Preference number: 2 (lower is better)
Translates to: IFLPVTRQHMEMVIPTSCLPSLL*PGQSKM
Trigger: CATTTTCGACTGGCCAGGCCAGAGTAGAGAGGGCAG...GCAGGATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGACTGGAAGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR TCA 90 bp GGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGCCCTCTCTATGGGACTaGTTCACTGTTCCAATGTGG +
Preference number: 2 (lower is better)
Translates to: GLMRISTIQVIRLAGFRRPSLWD*FTVPMW
Trigger: CCACATTGGAACAGTGAATCAGTCCCATAGAGAGGG...CCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR TCA 90 bp ACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGAAACCATGCACTGGTaGATGGCTGTTTGCAAGTTG +
Preference number: 2 (lower is better)
Translates to: TRGWGLMRISTIQVIRLAETMHW*MAVCKL
Trigger: CAACTTGCAAACAGCCATTCACCAGTGCATGGTTTC...AGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647472.1
3UTR-3UTR TCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAAATCATGGTATACCTTaGGTTGGTGAAGGAGAATAC +
Preference number: 2 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTNHGIP*VGEGEY
Trigger: GTATTCTCCTTCACCAACTCAAGGTATACCATGATT...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR TCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTAGTACGTGTCTGTGCTaGCTTGTTAAGCAATCCACT +
Preference number: 2 (lower is better)
Translates to: HQPHLIHGERVMQTSADISTCLC*LVKQST
Trigger: AGTGGATTGCTTAACAAGTCAGCACAGACACGTACT...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR GCA 90 bp AGCTTCAGAGAATCACACTCTCTAAAAAGGGCCTTGTGTAAAGCCACCTTGCATCATCCGACAAGCAGGTaGACTCCCAGTGTTCAGAAC +
Preference number: 2 (lower is better)
Translates to: SFRESHSLKRALCKATLHHPTSR*TPSVQN
Trigger: GTTCTGAACACTGGGAGTGCACCTGCTTGTCGGATG...ATGCAAGGTGGCTTTACACAAGGCCCTTTTTAGAGAGTGTGATTCTCTGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR-3UTR CCA 90 bp CTGGGCCAGAAAGAATTTTTACCACCTGTTTGTAGATGTAACTTATTTGTGGCAGCTGCAGGCCTAGGCTaGAAGGACTCTGCAGGACTC +
Preference number: 2 (lower is better)
Translates to: LGQKEFLPPVCRCNLFVAAAGLG*KDSAGL
Trigger: GAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGC...TGCCACAAATAAGTTACATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
3UTR CAA 90 bp CACCATCCCACCCCAGTTATTAGAGAGTATCGTGGGAACCTGGATTaGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTG +
Preference number: 2 (lower is better)
Translates to: HHPTPVIREYRGNLD*QAFQLLVWRRILCL
Trigger: CAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATCCAGGTTCCCACGATACTCTCTAATAACTGGGGTGGGATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR TCA 90 bp AACATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 2 (lower is better)
Translates to: NIECIETRGWGLMRISTIHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...TATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR TCA 90 bp CTATTGAAAGCTCTGACTGCAAGTCAAAGGCTGCTGATATCTGAGGGTGGATATCATTTATCATTTAGCTaGGGAGGCAGGCTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: LLKALTASQRLLISEGGYHLSFS*GGRLQG
Trigger: TCCCTGCAGCCTGCCTCCTCAGCTAAATGATAAATG...ATATCCACCCTCAGATATCAGCAGCCTTTGACTTGCAGTCAGAGCTTTCAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR TCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATGTGGGGATTTCATTTaGACTGCTATCGAAGAATAT +
Preference number: 2 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTCGDFI*TAIEEY
Trigger: ATATTCTTCGATAGCAGTTCAAATGAAATCCCCACA...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CCA 90 bp GGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCCCATGCACTGGTGAATaGCTGTTTGCAAGTTGTACA +
Preference number: 2 (lower is better)
Translates to: GWGLMRISTIQVIRLAGFPCTGE*LFASCT
Trigger: TGTACAACTTGCAAACAGCCATTCACCAGTGCATGG...GAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647472.1
3UTR-3UTR CCA 90 bp TGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCGCACCACTGACCTATTATaGTTCAACTTTGTGGTCAAA +
Preference number: 2 (lower is better)
Translates to: CFREMGWGYTHSRLPELRTTDLL*FNFVVK
Trigger: TTTGACCACAAAGTTGAACCATAATAGGTCAGTGGT...GCGAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTGCTCCAGGTTCCCACTaGGAATTCTCTGGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: DLQAFQLLVWRRILCLNAAPGSH*EFSGRD
Trigger: GTCTCTGCCAGAGAATTCCCAGTGGGAACCTGGAGC...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CCA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCAGTATCGTGGGAACCTaGATTTGCAGGCTTTCCAAT +
Preference number: 2 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSSIVGT*ICRLSN
Trigger: ATTGGAAAGCCTGCAAATCCAGGTTCCCACGATACT...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR TCA 90 bp AATAAGAAACTACTGACATTTATCACCTTCTTTAGGATTTACCGCTCGCCCAGTCACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 2 (lower is better)
Translates to: NKKLLTFITFFRIYRSPSHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...ACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
3UTR-3UTR GCA 90 bp GAAACAGGTACAGAAGTACAAAATCATAAGCAGCCTCATTGTCTTATAAGCATTCTGCGGGGCATATTCTaGACTCATCCCAGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: ETGTEVQNHKQPHCLISILRGIF*THPRRG
Trigger: CCCACGCCTGGGATGAGTGCAGAATATGCCCCGCAG...AATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647472.1
3UTR-3UTR GCA 90 bp ACCACTGACCTATTATGGTTCAACTTTGTGGTCAAACTAGGTCGGAGAGACAAGACCCACACACCTAGCTaGCTCCCTGCTAAAATTAAC +
Preference number: 2 (lower is better)
Translates to: TTDLLWFNFVVKLGRRDKTHTPS*LPAKIN
Trigger: GTTAATTTTAGCAGGGAGGCAGCTAGGTGTGTGGGT...CTTGTCTCTCCGACCTAGTTTGACCACAAAGTTGAACCATAATAGGTCAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR GCA 90 bp CGTGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCCTTTGTAATTATTCATaGACGAAAGGTTTACCTCAC +
Preference number: 2 (lower is better)
Translates to: RALEKWAGGTHTAVFQNFLCNYS*TKGLPH
Trigger: GTGAGGTAAACCTTTCGTGCATGAATAATTACAAAG...GAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR GCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTTTTTGTTTGAGGAGGTaGAGGGATTGGCCAAATATT +
Preference number: 2 (lower is better)
Translates to: HQPHLIHGERVMQTSADIFCLRR*RDWPNI
Trigger: AATATTTGGCCAATCCCTGCACCTCCTCAAACAAAA...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR GCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAAAGTTTAGAAACCAATaGTACACTACAGAGCAAATG +
Preference number: 2 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTKFRNQ*YTTEQM
Trigger: CATTTGCTCTGTAGTGTAGCATTGGTTTCTAAACTT...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR GCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTTGGAGAAGAATCCTTTaGTTGAATGCTAACTCACAC +
Preference number: 2 (lower is better)
Translates to: HQPHLIHGERVMQTSADIWRRIL*LNANSH
Trigger: GTGTGAGTTAGCATTCAAGCAAAGGATTCTTCTCCA...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR GCA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCGAGTGCAAATCCTGTTaGTTGAGATTTGCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSECKSC*LRFAFL
Trigger: CAGAAAGGCAAATCTCAAGCAACAGGATTTGCACTC...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTACACTACAGAGCAAATaGGACTTGAAGGCCAAATTT +
Preference number: 2 (lower is better)
Translates to: HQPHLIHGERVMQTSADITLQSK*DLKAKF
Trigger: AAATTTGGCCTTCAAGTCCCATTTGCTCTGTAGTGT...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR TCA 90 bp TTTAGACAACCAGGGAGTTCAAGCAAATATCTCTTATTTCCCTACATAGATTCACAGCCCCATCCGGGCTaGCAGCCAATATGGATCCAA +
Preference number: 2 (lower is better)
Translates to: FRQPGSSSKYLLFPYIDSQPHPG*QPIWIQ
Trigger: TTGGATCCATATTGGCTGTCAGCCCGGATGGGGCTG...TGAATCTATGTAGGGAAATAAGAGATATTTGCTTGAACTCCCTGGTTGTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR GCA 90 bp TGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACTCCTTGAAAATTTATaGCATCTGATAAGCGGTAAC +
Preference number: 2 (lower is better)
Translates to: CPFLKSVPPTHPMGVCRKLLENL*HLISGN
Trigger: GTTACCGCTTATCAGATGGCATAAATTTTCAAGGAG...TTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR GCA 90 bp AATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTCTCCTTGAAAATTTATaGCATCTGATAAGCGGTAAC +
Preference number: 2 (lower is better)
Translates to: NLFLLPTRWVSVGNRYRSLLENL*HLISGN
Trigger: GTTACCGCTTATCAGATGGCATAAATTTTCAAGGAG...ACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR GCA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTTCGTGCACTGCGCGTTaGCTTAGAGGAGCAACCTGT +
Preference number: 2 (lower is better)
Translates to: VYLELVKENTSGLVLLVFSCTAR*LRGATC
Trigger: ACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGA...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CAA 90 bp CGAAAGGTTTACCTCACCTGGGTCACAGCACTTGTTGTGCGCCCATaGAATATCTTAGACATCTTAGAGAGCTTTTCGTCTCAGTTAAAT +
Preference number: 2 (lower is better)
Translates to: RKVYLTWVTALVVRP*NILDILESFSSQLN
Trigger: ATTTAACTGAGACGAAAAGCTCTCTAAGATGTCTAAGATATTCAATGGGCGCACAACAAGTGCTGTGACCCAGGTGAGGTAAACCTTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CAA 90 bp GTTCTCCTGGACGGTTCTGCACAGAATTCATTCACAGAGCATGTCTaGGATATACAGCTGACTAGATATGTCAGTTATGTTCCAAATGGG +
Preference number: 2 (lower is better)
Translates to: VLLDGSAQNSFTEHV*DIQLTRYVSYVPNG
Trigger: CCCATTTGGAACATAACTGACATATCTAGTCAGCTGTATATCCAAGACATGCTCTGTGAATGAATTCTGTGCAGAACCGTCCAGGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR-3UTR TCA 90 bp TGCATTTTGATTCTCCTTGAAAATTTATGCCATCTGATAAGCGGTAACCTAGTTCACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 2 (lower is better)
Translates to: CILILLENLCHLISGNLVHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...AACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR TCA 90 bp GCCACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATTCCCTCTCTATGGGACTaGTTCACTGTTCCAATGTGG +
Preference number: 2 (lower is better)
Translates to: ATKSIYLKNRIRRAILCIPSLWD*FTVPMW
Trigger: CCACATTGGAACAGTGAATCAGTCCCATAGAGAGGG...AATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
3UTR-3UTR TCA 90 bp CTATTGAAAGCTCTGACTGCAAGTCAAAGGCTGCTGATATCTGAGGGTGGATATTATCCTGCCTACATCTaGTTCAGTGAGGTGGAAAAT +
Preference number: 2 (lower is better)
Translates to: LLKALTASQRLLISEGGYYPAYI*FSEVEN
Trigger: ATTTTCCACCTCACTGAATCAGATGTAGGCAGGATA...ATATCCACCCTCAGATATCAGCAGCCTTTGACTTGCAGTCAGAGCTTTCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR TCA 90 bp CACATCTTCCAGCTCCAACCACCACAGCTCACAGTCATTCTTGTCTTCTGTAACTCTTGGATATACAGCTaGCTAGATATGTCAGTTATG +
Preference number: 2 (lower is better)
Translates to: HIFQLQPPQLTVILVFCNSWIYS*LDMSVM
Trigger: CATAACTGACATATCTAGTCAGCTGTATATCCAAGA...GTTACAGAAGACAAGAATGACTGTGAGCTGTGGTGGTTGGAGCTGGAAGATGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR-3UTR TCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTAGACTGATTCAGTTCTaGATAACATGCTGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: DLQAFQLLVWRRILCLNARLIQF*ITCCQP
Trigger: GGGCTGGCAGCATGTTATTCAGAACTGAATCAGTCT...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR GCA 90 bp CTATTGAAAGCTCTGACTGCAAGTCAAAGGCTGCTGATATCTGAGGGTGGATATGCAGACTTGGAATTGTaGAGACGTGCTTTAGAGAAA +
Preference number: 2 (lower is better)
Translates to: LLKALTASQRLLISEGGYADLEL*RRALEK
Trigger: TTTCTCTAAAGCACGTCTGCACAATTCCAAGTCTGC...ATATCCACCCTCAGATATCAGCAGCCTTTGACTTGCAGTCAGAGCTTTCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CCA 90 bp CTGGGCCAGAAAGAATTTTTACCACCTGTTTGTAGATGTAACTTATTTGTGGCACGCACAACGGCTTCTTaGAGGCTACTGTCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: LGQKEFLPPVCRCNLFVARTTAS*RLLSEN
Trigger: GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCG...TGCCACAAATAAGTTACATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
3UTR-3UTR CCA 90 bp CTATTGAAAGCTCTGACTGCAAGTCAAAGGCTGCTGATATCTGAGGGTGGATATTGTAAGGGTGACATGTaGCTGTGTAAACCACAAACA +
Preference number: 2 (lower is better)
Translates to: LLKALTASQRLLISEGGYCKGDM*LCKPQT
Trigger: TGTTTGTGGTTTACACAGCCACATGTCACCCTTACA...ATATCCACCCTCAGATATCAGCAGCCTTTGACTTGCAGTCAGAGCTTTCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTGGAGTTTTTAATCAGTaGATTCGCCTCTATCTAAAA +
Preference number: 2 (lower is better)
Translates to: HQPHLIHGERVMQTSADIGVFNQ*IRLYLK
Trigger: TTTTAGATAGAGGCGAATCCACTGATTAAAAACTCC...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR TCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTCACTGGTTTTCTTTTTaGAGGCACCCTTGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: DLQAFQLLVWRRILCLNAHWFSF*RHPCRF
Trigger: AAACCTGCAAGGGTGCCTTCAAAAAGAAAACCAGTG...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR GCA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTTGCATACGTCAATCGTaGACTGCGCGTTGCCTTAGA +
Preference number: 2 (lower is better)
Translates to: VYLELVKENTSGLVLLVFCIRQS*TARCLR
Trigger: TCTAAGGCAACGCGCAGTGCACGATTGACGTATGCA...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR GCA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTCTTCATCAACATACCTaGTCCAGGTTCCCACTGGGA +
Preference number: 2 (lower is better)
Translates to: VYLELVKENTSGLVLLVFLHQHT*SRFPLG
Trigger: TCCCAGTGGGAACCTGGAGCAGGTATGTTGATGAAG...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CCA 90 bp GATTTTCCCCACTTAGGTTCACGGCCTGTATGTGAATCTACAGCACACAGGTGTTCTGTGCAAATTAACTaGGCCAGAAAGAATTTTTAC +
Preference number: 2 (lower is better)
Translates to: DFPHLGSRPVCESTAHRCSVQIN*ARKNFY
Trigger: GTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAGA...ACACCTGTGTGCTGTAGATTCACATACAGGCCGTGAACCTAAGTGGGGAAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
3UTR-3UTR CCA 90 bp ATTTTCCTTCCAGTCACAAGACAACACATGGAAATGGTCATTCCCACATCCTGCAGTCAAACAAGTCATTaGCTGAACTGCAAATGCCTA +
Preference number: 2 (lower is better)
Translates to: IFLPVTRQHMEMVIPTSCSQTSH*LNCKCL
Trigger: TAGGCATTTGCAGTTCAGCCAATGACTTGTTTGACT...GCAGGATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGACTGGAAGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CCA 90 bp ATGTCACATAAGGTAAATGTGGTGGATTCAAGAAATACACTCCACAAATGCAGCCAGTGGAGTCTGGACTaGACATTTGTAAGGGTGACA +
Preference number: 2 (lower is better)
Translates to: MSHKVNVVDSRNTLHKCSQWSLD*TFVRVT
Trigger: TGTCACCCTTACAAATGTCCAGTCCAGACTCCACTG...GCTGCATTTGTGGAGTGTATTTCTTGAATCCACCACATTTACCTTATGTGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTATAGCAATTAACTTCTaGTCAGCAGTGTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: DLQAFQLLVWRRILCLNAIAINF*SAVCRQ
Trigger: CTGCCTGCACACTGCTGACCAGAAGTTAATTGCTAT...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR TCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAAAACAGGTGTGCTGGTaGCAAGCACTCTCATATTCT +
Preference number: 2 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKKQVCW*QALSYS
Trigger: AGAATATGAGAGTGCTTGTCACCAGCACACCTGTTT...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR TCA 90 bp CAAGTACGTGTCTGTGCTGACTTGTTAAGCAATCCACTTGTATGTAGAATAAGAAAAACTCATTGTGAGTaGCCAAAGGTCCCCAGGTAT +
Preference number: 2 (lower is better)
Translates to: QVRVCADLLSNPLVCRIRKTHCE*PKVPRY
Trigger: ATACCTGGGGACCTTTGGTCACTCACAATGAGTTTT...TCTTATTCTACATACAAGTGGATTGCTTAACAAGTCAGCACAGACACGTACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR TCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGAATGAGTAGAGTTCAATaGGGGTTGATATGGGATGTG +
Preference number: 2 (lower is better)
Translates to: LLELILPEMWMLSRKSERMSRVQ*GLIWDV
Trigger: CACATCCCATATCAACCCTCATTGAACTCTACTCAT...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR TCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTTCAGGTACTACCCCCTaGTTTCTTAACTCTCTTATC +
Preference number: 2 (lower is better)
Translates to: DLQAFQLLVWRRILCLNASGTTP*FLNSLI
Trigger: GATAAGAGAGTTAAGAAATCAGGGGGTAGTACCTGA...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAACAGGCAGAGTCAAGTaGTATTTGAACACCAACTGG +
Preference number: 2 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKTGRVK*YLNTNW
Trigger: CCAGTTGGTGTTCAAATAGCACTTGACTCTGCCTGT...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR CCA 90 bp ATTTTGATTCTCCTTGAAAATTTATGCCATCTGATAAGCGGTAACCTAGTTCCCATAGAAACAAGGGGTTaGGGACTCATGCGCATTTCC +
Preference number: 2 (lower is better)
Translates to: ILILLENLCHLISGNLVPIETRG*GLMRIS
Trigger: GGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTAT...GGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR TCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCAAACAGGTGTGCTGGTaGCAAGCACTCTCATATTCT +
Preference number: 2 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLKQVCW*QALSYS
Trigger: AGAATATGAGAGTGCTTGTCACCAGCACACCTGTTT...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGCCCCATACAGATCATaGATTCAAACGGTGAGAACA +
Preference number: 2 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLAPYRS*IQTVRT
Trigger: TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCTCTCAGAACGGAACTaGAAACAGCAACATGTTTGC +
Preference number: 2 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLLSERN*KQQHVC
Trigger: GCAAACATGTTGCTGTTTCCAGTTCCGTTCTGAGAG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR CCA 90 bp CACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATTATATAGAAACAAGGGGTTaGGGACTCATGCGCATTTCC +
Preference number: 2 (lower is better)
Translates to: HQKHIFEKQDSACHIMHYIETRG*GLMRIS
Trigger: GGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTAT...ATAATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
3UTR-3UTR CCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGAATGCATTGTTTTAACTaGAAACTGAAAGGATCGGGG +
Preference number: 2 (lower is better)
Translates to: LLELILPEMWMLSRKSERMHCFN*KLKGSG
Trigger: CCCCGATCCTTTCAGTTTCCAGTTAAAACAATGCAT...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR TCA 90 bp ATGTCACATAAGGTAAATGTGGTGGATTCAAGAAATACACTCCACAAATGCAGCAAACAAGTCATTGGCTaGACTGCAAATGCCTATATG +
Preference number: 2 (lower is better)
Translates to: MSHKVNVVDSRNTLHKCSKQVIG*TANAYM
Trigger: CATATAGGCATTTGCAGTTCAGCCAATGACTTGTTT...GCTGCATTTGTGGAGTGTATTTCTTGAATCCACCACATTTACCTTATGTGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAGCGTTCCAGGGCTTTTaGACATTACACATTCAATTT +
Preference number: 2 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKAFQGF*TLHIQF
Trigger: AAATTGAATGTGTAATGTGCAAAAGCCCTGGAACGC...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR GCA 90 bp GTAGCCACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCCTCCTTGAAAATTTATaGCATCTGATAAGCGGTAAC +
Preference number: 2 (lower is better)
Translates to: VATKSIYLKNRIRRAILCLLENL*HLISGN
Trigger: GTTACCGCTTATCAGATGGCATAAATTTTCAAGGAG...GCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
3UTR-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAAGAATGTATGCAGCATaGTCTTTTTCTCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQRMYAA*SFSLSL
Trigger: GAGAGAGAGAGAAAAAGACCATGCTGCATACATTCT...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR TCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAACAACCTCTGTATCTCTaGTTAGAGAAAAGATACAGA +
Preference number: 2 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKQPLYL*LEKRYR
Trigger: TCTGTATCTTTTCTCTAATCAGAGATACAGAGGTTG...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCACTAGTGTATTTAATTaGGTTCCAGGGCTTTTGCAC +
Preference number: 2 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLTSVFN*VPGLLH
Trigger: GTGCAAAAGCCCTGGAACGCAATTAAATACACTAGT...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR TCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCTACCTCACCCAATGCTaGATTAAGCTACAAGTTTAT +
Preference number: 2 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLYLTQC*IKLQVY
Trigger: ATAAACTTGTAGCTTAATTCAGCATTGGGTGAGGTA...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAAAAGTTTGCGTAAAATaGAATAGTATTGCCCCATAC +
Preference number: 2 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQKVCVK*NSIAPY
Trigger: GTATGGGGCAATACTATTGCATTTTACGCAAACTTT...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAGTATTACAGAATGTATaGAGCATGGTCTTTTTCTCT +
Preference number: 2 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQVLQNV*SMVFFS
Trigger: AGAGAAAAAGACCATGCTGCATACATTCTGTAATAC...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAGTATTACAGAATGTATaGAGCATGGTCTTTTTCTCT +
Preference number: 2 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKVLQNV*SMVFFS
Trigger: AGAGAAAAAGACCATGCTGCATACATTCTGTAATAC...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR GCA 90 bp AATAAGAAACTACTGACATTTATCACCTTCTTTAGGATTTACCGCTCGCCCAGTAAACAGGATTCGGCGTaGCATATTATGCATTATTTA +
Preference number: 2 (lower is better)
Translates to: NKKLLTFITFFRIYRSPSKQDSA*HIMHYL
Trigger: TAAATAATGCATAATATGGCACGCCGAATCCTGTTT...ACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
3UTR-3UTR CCA 90 bp GAAACAGGTACAGAAGTACAAAATCATAAGCAGCCTCATTGTCTTATAAGCATTTACATGTGTAGCTGCTaGGCTCATCTTTACAAATAC +
Preference number: 2 (lower is better)
Translates to: ETGTEVQNHKQPHCLISIYMCSC*AHLYKY
Trigger: GTATTTGTAAAGATGAGCCCAGCAGCTACACATGTA...AATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647472.1
3UTR-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCAAAGTTTGCGTAAAATaGAATAGTATTGCCCCATAC +
Preference number: 2 (lower is better)
Translates to: LYMICITECMQHGLFLSLKVCVK*NSIAPY
Trigger: GTATGGGGCAATACTATTGCATTTTACGCAAACTTT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR CCA 72 bp TCGCCGGCCACCGAGTCTTCGTCGCAAGTGTCCCTGTaGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGC +
Preference number: 3 (lower is better)
Translates to: SPATESSSQVSL*PSASARWPRLC
Trigger: GCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTGCGACGAAGACTCGGTGGCCGGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR CAA 90 bp CCCTGTGGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCCAGGAGGGTCGTTCTCGCTCTaGAACTTGGCCACCACGGAC +
Preference number: 3 (lower is better)
Translates to: PCGPRPRPGGRAYASRPGGSFSL*NLATTD
Trigger: GTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCC...TCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR GCA 72 bp TCGCTGAAGTGCTGCATGGAGCTGAGCACCATGCCCTaGATGACGTCGGGCAGGGCGCGGCTCTCGTCGCCC +
Preference number: 3 (lower is better)
Translates to: SLKCCMELSTMP*MTSGRARLSSP
Trigger: GGGCGACGAGAGCCGCGCCCTGCCCGACGTCATGCAGGGCATGGTGCTCAGCTCCATGCAGCACTTCAGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR CAA 90 bp TGGTGGAAGGCCTCGCTGAAGTGCTGCATGGAGCTGAGCACCATGCCCTGCATGTTGGCCACCACGGACTaGAGCGCGCTGCTGGCGCTG +
Preference number: 3 (lower is better)
Translates to: WWKASLKCCMELSTMPCMLATTD*SALLAL
Trigger: CAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCAA...CATGCAGGGCATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTTCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR CAA 90 bp CCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCCAGGACCTGGTGGAAGGCCTTTCTCCGGGATCAGGTaGGGGTCGTTCTCGCTCTTG +
Preference number: 3 (lower is better)
Translates to: PRPGGRAYASRPGPGGRPFSGIR*GSFSLL
Trigger: CAAGAGCGAGAACGACCCCAACCTGATCCCGGAGAA...AGGCCTTCCACCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR CAA 90 bp CCCTCTTTTGAGCTGGGCCTGCCCGGGCCCGGACCACTAATATGGGGCGTGCTCGGCCAAAGAGAAGCGTaGCTAGGAGAATGGACACGG +
Preference number: 3 (lower is better)
Translates to: PSFELGLPGPGPLIWGVLGQREA*LGEWTR
Trigger: CCGTGTCCATTCTCCTAGCAACGCTTCTCTTTGGCC...GAGCACGCCCCATATTAGTGGTCCGGGCCCGGGCAGGCCCAGCTCAAAAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR TCA 72 bp GCACCTTGTTTTCACCACCAGGGCACTCGTGTACCTTaGGGGAGACACTGGGAGCCCAGGGAGCCTGGAGAC +
Preference number: 3 (lower is better)
Translates to: APCFHHQGTRVP*GRHWEPREPGD
Trigger: GTCTCCAGGCTCCCTGGGCTCCCAGTGTCTCCCTCAAGGTACACGAGTGCCCTGGTGGTGAAAACAAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR TCA 72 bp GGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATaGCAGCGATGGTCCACGGGCCCTCTCTATGGGACT +
Preference number: 3 (lower is better)
Translates to: GWLVSEGPGHHS*QRWSTGPLYGT
Trigger: AGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR CCA 72 bp TACCCTGCGGGGCATATTCTGCACTCATCCCAGGCGTaGGGATTAGAGCTCCATGTGCAGAACGAGGGGAGG +
Preference number: 3 (lower is better)
Translates to: YPAGHILHSSQA*GLELHVQNEGR
Trigger: CCTCCCCTCGTTCTGCACATGGAGCTCTAATCCCCACGCCTGGGATGAGTGCAGAATATGCCCCGCAGGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
3UTR-3UTR CAA 90 bp TCCGTGTTGGGCATCGCGGCCGGGGGCAGGTCGAACTCCTTCTCGAGCTTGATGAAACTGCCACACATCTaGAGCTCTCTGGGTACTACG +
Preference number: 3 (lower is better)
Translates to: SVLGIAAGGRSNSFSSLMKLPHI*SSLGTT
Trigger: CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTT...CATCAAGCTCGAGAAGGAGTTCGACCTGCCCCCGGCCGCGATGCCCAACACGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR CAA 90 bp CTCGCCCGGGGAGCAGCCGCGGCCATTAACAGTGCCATCGTCTATGCGGTCCGAAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 3 (lower is better)
Translates to: LARGAAAAINSAIVYAVRSVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...TCGGACCGCATAGACGATGGCACTGTTAATGGCCGCGGCTGCTCCCCGGGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR TCA 72 bp CTCCTGCCCCTTGCAGTCCTTTGCCCTGTTCAGGGCTaGATGCACCCTCTGAGAGTCTCTGTGACAGTCCTC +
Preference number: 3 (lower is better)
Translates to: LLPLAVLCPVQG*MHPLRVSVTVL
Trigger: GAGGACTGTCACAGAGACTCTCAGAGGGTGCATTCAGCCCTGAACAGGGCAAAGGACTGCAAGGGGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR CCA 72 bp TGGCAAACTGGCCAAAGAGAAGCGTTGCTAGGAGAATaGACACGGCAGGAAACAGCCTCAGCTTGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: WQTGQREALLGE*TRQETASAWPR
Trigger: CCTGGGCCAAGCTGAGGCTGTTTCCTGCCGTGTCCATTCTCCTAGCAACGCTTCTCTTTGGCCAGTTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR CCA 72 bp GCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATaGGGGTGTGTGAAGAACAAGTGTCGCTGCGTCTGC +
Preference number: 3 (lower is better)
Translates to: ATHLELSGYYAE*GCVKNKCRCVC
Trigger: GCAGACGCAGCGACACTTGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR TCA 72 bp GCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTaGGCTCTCTGGGTACTACGCCGAATGGGGGTGTGT +
Preference number: 3 (lower is better)
Translates to: ALELPSENCHTS*ALWVLRRMGVC
Trigger: ACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000479026.2
ENST00000631857.1
ENST00000647472.1
3UTR TCA 72 bp CACAGCCGTCTTCCAGAACTTCGCTTCAGGGGCACCTaGGGGCCAGAGCGTCGGAATTTATGTGCAATGGTA +
Preference number: 3 (lower is better)
Translates to: HSRLPELRFRGT*GPERRNLCAMV
Trigger: TACCATTGCACATAAATTCCGACGCTCTGGCCCTCAGGTGCCCCTGAAGCGAAGTTCTGGAAGACGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR GCA 72 bp ATAAAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCACAACGGCTTCTTGGAG +
Preference number: 3 (lower is better)
Translates to: IKWRCRPRLEGL*RTLSSHNGFLE
Trigger: CTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CAA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACAAACTGCCACACATCTaGAGCTCTCTGGGTACTACG +
Preference number: 3 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYKLPHI*SSLGTT
Trigger: CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTT...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479026.2
ENST00000647472.1
3UTR TCA 72 bp CAATTATGCATGCAGTTGGCCGGAGACCAAAGGCTGTaGAGTCGGAGAGGGCAGAATCGCTCGACACACACA +
Preference number: 3 (lower is better)
Translates to: QLCMQLAGDQRL*SRRGQNRSTHT
Trigger: TGTGTGTGTCGAGCGATTCTGCCCTCTCCGACTTCACAGCCTTTGGTCTCCGGCCAACTGCATGCATAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CCA 72 bp GGGTCATGCAGACATCAGCTGACATTCAGAAAGTTGTaGTGTCCACCCACCACCACCATCCCACCCCAGTTA +
Preference number: 3 (lower is better)
Translates to: GSCRHQLTFRKL*CPPTTTIPPQL
Trigger: TAACTGGGGTGGGATGGTGGTGGTGGGTGGACACCACAACTTTCTGAATGTCAGCTGATGTCTGCATGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 72 bp ACTTTTCGAGTAAGCATGTCTGTGCGCTTCAGCAACTaGCCTCTCTACTCTGGCCTGGCCAGTCGAAAATGG +
Preference number: 3 (lower is better)
Translates to: TFRVSMSVRFSN*PLYSGLASRKW
Trigger: CCATTTTCGACTGGCCAGGCCAGAGTAGAGAGGGCAGTTGCTGAAGCGCACAGACATGCTTACTCGAAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CCA 72 bp CTGTGCGCTTCAGCAACTGCCCTCTCTACTCTGGCCTaGCCAGTCGAAAATGGCATCTTAAAGTCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: LCASATALSTLA*PVENGILKSRS
Trigger: TGACCTTGACTTTAAGATGCCATTTTCGACTGGCCAGGCCAGAGTAGAGAGGGCAGTTGCTGAAGCGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CCA 72 bp CTTGGAATTGTGCAGACGTGCTTTAGAGAAATGGGCTaGGGGTACACACACAGCCGTCTTCCAGAACTTCGC +
Preference number: 3 (lower is better)
Translates to: LGIVQTCFREMG*GYTHSRLPELR
Trigger: GCGAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACGTCTGCACAATTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CCA 72 bp GCAGACTTGGAATTGTGCAGACGTGCTTTAGAGAAATaGGCTGGGGGTACACACACAGCCGTCTTCCAGAAC +
Preference number: 3 (lower is better)
Translates to: ADLELCRRALEK*AGGTHTAVFQN
Trigger: GTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACGTCTGCACAATTCCAAGTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CAA 90 bp GGCTTCAAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCGGAAACAGCCTCAGCTaGGCCCAGGAAGAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: GFKFSQNLRALELPSENCGNSLS*AQEEAG
Trigger: GCCAGCTTCTTCCTGGGCCAAGCTGAGGCTGTTTCC...GCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR CAA 90 bp AAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTGAGCTCTCTGGGTTATAGAAACAAGGGGTaGGGGACTCATGCGCATTTC +
Preference number: 3 (lower is better)
Translates to: KGSRASIRKLPHILSSLGYRNKG*GTHAHF
Trigger: GAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATA...ACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479026.2
ENST00000647472.1
3UTR CCA 72 bp CAAACAGGCCACTCGTGCAATCAGGGTTATTTGTCATaGAAAAGCCACAGGGGAAAGGTGATGGCAAGGAGG +
Preference number: 3 (lower is better)
Translates to: QTGHSCNQGYLS*KSHRGKVMARR
Trigger: CCTCCTTGCCATCACCTTTCCCCTGTGGCTTTTCCATGACAAATAACCCTGATTGCACGAGTGGCCTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646249.1
3UTR CCA 72 bp GCCACTTTGCCTCTGACACGTCACCAAGGCTGGAAATaGACAATGGAAGCTGGACTAGGTGTAGTAAAGCTC +
Preference number: 3 (lower is better)
Translates to: ATLPLTRHQGWK*TMEAGLGVVKL
Trigger: GAGCTTTACTACACCTAGTCCAGCTTCCATTGTCCATTTCCAGCCTTGGTGACGTGTCAGAGGCAAAGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CAA 90 bp ATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 3 (lower is better)
Translates to: ISCPFLKSVPPTHPMGVCSVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...ACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647472.1
3UTR TCA 72 bp GCTGAACTGCAAATGCCTATATGGCCACTTTGCCTCTaGCACGTCACCAAGGCTGGAAATGGACAATGGAAG +
Preference number: 3 (lower is better)
Translates to: AELQMPIWPLCL*HVTKAGNGQWK
Trigger: CTTCCATTGTCCATTTCCAGCCTTGGTGACGTGTCAGAGGCAAAGTGGCCATATAGGCATTTGCAGTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR TCA 72 bp GACTTGAAGGCCAAATTTCCCCTAACTGCCTTCAAGTaGTTTTCCCTATTAGAGCGTTTGCCTGCCACCCCC +
Preference number: 3 (lower is better)
Translates to: DLKAKFPLTAFK*FSLLERLPATP
Trigger: GGGGGTGGCAGGCAAACGCTCTAATAGGGAAAATCACTTGAAGGCAGTTAGGGGAAATTTGGCCTTCAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 72 bp TCAGTGCACACATCTGTTGGTAGGAAGAGGCAACTCTaGATGCCTTTACCAAAGGCCATCCTGGGTCTGTAT +
Preference number: 3 (lower is better)
Translates to: SVHTSVGRKRQL*MPLPKAILGLY
Trigger: ATACAGACCCAGGATGGCCTTTGGTAAAGGCATGCAGAGTTGCCTCTTCCTACCAACAGATGTGTGCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646249.1
3UTR CCA 72 bp GAGGCCTGGCCAGATGTTCTGAGTCAAACAAGTCATTaGCTGAACTGCAAATGCCTATATGGCCACTTTGCC +
Preference number: 3 (lower is better)
Translates to: EAWPDVLSQTSH*LNCKCLYGHFA
Trigger: GGCAAAGTGGCCATATAGGCATTTGCAGTTCAGCCAATGACTTGTTTGACTCAGAACATCTGGCCAGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CAA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTCGCACAACGGCTTCTaGGAGGCTACTGTCAGAAAA +
Preference number: 3 (lower is better)
Translates to: LCLRTTASWRLLSENITNSHNGF*EATVRK
Trigger: TTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CAA 90 bp TGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAATATAGAAACAAGGGGTaGGGGACTCATGCGCATTTC +
Preference number: 3 (lower is better)
Translates to: CPFLKSVPPTHPMGVCRKYRNKG*GTHAHF
Trigger: GAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATA...TTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CAA 90 bp GACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAAAACTGCCACACATCTaGAGCTCTCTGGGTACTACG +
Preference number: 3 (lower is better)
Translates to: DSVFAQRLLGGYCQKTSQKLPHI*SSLGTT
Trigger: CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTT...TTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479026.2
ENST00000647472.1
3UTR-3UTR CAA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTTGTACAGGAACAGACTaGGCACATAGTGCTTTGTGC +
Preference number: 3 (lower is better)
Translates to: HQPHLIHGERVMQTSADICTGTD*AHSALC
Trigger: GCACAAAGCACTATGTGCCAAGTCTGTTCCTGTACA...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR TCA 72 bp AACCAGAAAACCTGGCTTCTCTGCTTTCTCTCTTACTaGTGTGGCCTCTGGCAAGCCCTTAACCTTGGTAAG +
Preference number: 3 (lower is better)
Translates to: NQKTWLLCFLSY*CGLWQALNLGK
Trigger: CTTACCAAGGTTAAGGGCTTGCCAGAGGCCACATCAGTAAGAGAGAAAGCAGAGAAGCCAGGTTTTCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
3UTR TCA 72 bp CCACTGGGAATTCTCTGGCAGAGACTGATTCAGTTCTaGATAACATGCTGCCAGCCCTATCTGGAAAAGGGT +
Preference number: 3 (lower is better)
Translates to: PLGILWQRLIQF*ITCCQPYLEKG
Trigger: ACCCTTTTCCAGATAGGGCTGGCAGCATGTTATTCAGAACTGAATCAGTCTCTGCCAGAGAATTCCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CCA 72 bp CCAGTGCAGAAGTTTATCTCAGGTACTATGGCAAACTaGCCAAAGAGAAGCGTTGCTAGGAGAATGGACACG +
Preference number: 3 (lower is better)
Translates to: PVQKFISGTMAN*PKRSVARRMDT
Trigger: CGTGTCCATTCTCCTAGCAACGCTTCTCTTTGGCCAGTTTGCCATAGTACCTGAGATAAACTTCTGCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR-3UTR CAA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAATGGTATACCTTGAGTaGGTGAAGGAGAATACTTCA +
Preference number: 3 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTMVYLE*VKENTS
Trigger: TGAAGTATTCTCCTTCACCAACTCAAGGTATACCAT...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CAA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCCAGAGCAAATGGGACTaGAAGGCCAAATTTCCCCTA +
Preference number: 3 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSQSKWD*KAKFPL
Trigger: TAGGGGAAATTTGGCCTTCAAGTCCCATTTGCTCTG...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CAA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACACTGTGGGGATTTCATTaGAACTGCTATCGAAGAATA +
Preference number: 3 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTLWGFH*NCYRRI
Trigger: TATTCTTCGATAGCAGTTCAAATGAAATCCCCACAG...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CAA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAAGAAGAATCCTTTGCTaGAATGCTAACTCACACCTT +
Preference number: 3 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTRRILC*NANSHL
Trigger: AAGGTGTGAGTTAGCATTCAAGCAAAGGATTCTTCT...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CAA 90 bp CCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAATCATATATAGAAACAAGGGGTaGGGGACTCATGCGCATTTC +
Preference number: 3 (lower is better)
Translates to: PTHPMGVCRKQVQKYKIIYRNKG*GTHAHF
Trigger: GAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATA...TATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CAA 90 bp AGACTTGGAATTGTGCAGACGTGCTTTAGAGAAATGGGCTGGGGGTACACACACAATTTGCTTTTGGTTTaGGCTTCTCTAGGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: RLGIVQTCFREMGWGYTHNLLLV*ASLGSA
Trigger: AGCAGAGCCTAGAGAAGCCAAAACCAAAAGCAAATT...GTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACGTCTGCACAATTCCAAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CAA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCTTAACTCTCTTATCCTaGGGCCCTGCTCAGAAATGT +
Preference number: 3 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSLTLLS*GPAQKC
Trigger: ACATTTCTGAGCAGGGCCCAAGGATAAGAGAGTTAA...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR TCA 72 bp TTCCATCTGGGTCATGTTTTGGAGGATCCCTTCCAGTaGGGTTCAAGACTGAAGCTGCCAAGAAAAGCTTCA +
Preference number: 3 (lower is better)
Translates to: FHLGHVLEDPFQ*GSRLKLPRKAS
Trigger: TGAAGCTTTTCTTGGCAGCTTCAGTCTTGAACCTCACTGGAAGGGATCCTCCAAAACATGACCCAGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR TCA 72 bp AAGATGCATCATTTTGCTCCTTTCTACTGGGGCATCTaGGGAGGAGAGCCACTGAGGCAGCTAATACACAAA +
Preference number: 3 (lower is better)
Translates to: KMHHFAPFYWGI*GGEPLRQLIHK
Trigger: TTTGTGTATTAGCTGCCTCAGTGGCTCTCCTCCTCAGATGCCCCAGTAGAAAGGAGCAAAATGATGCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 72 bp CTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTaGTCTTGCTTCATTAATCATGCCTTACACTTCTGT +
Preference number: 3 (lower is better)
Translates to: LWISEDDKSPSA*SCFINHALHFC
Trigger: ACAGAAGTGTAAGGCATGATTAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR GCA 72 bp CAAGAAAATGATAGTGCGTGTGGAATCAATTATGCATaGAGTTGGCCGGAGACCAAAGGCTGTGAAGTCGGA +
Preference number: 3 (lower is better)
Translates to: QENDSACGINYA*SWPETKGCEVG
Trigger: TCCGACTTCACAGCCTTTGGTCTCCGGCCAACTGCATGCATAATTGATTCCACACGCACTATCATTTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CCA 72 bp AAGTGTTACTCCATATTTGGTGATTTAGCAAGGCTTTaGATCTCCGAAGACGACAAATCCCCTTCCGCCTGC +
Preference number: 3 (lower is better)
Translates to: KCYSIFGDLARL*ISEDDKSPSAC
Trigger: GCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATCACCAAATATGGAGTAACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
3UTR CCA 72 bp TGGCCAGTCGAAAATGGCATCTTAAAGTCAAGGTCATaGTGTCATCCCACCACGGGGCTGTGTTTAATTACA +
Preference number: 3 (lower is better)
Translates to: WPVENGILKSRS*CHPTTGLCLIT
Trigger: TGTAATTAAACACAGCCCCGTGGTGGGATGACACCATGACCTTGACTTTAAGATGCCATTTTCGACTGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CAA 90 bp AGACTTGGAATTGTGCAGACGTGCTTTAGAGAAATGGGCTGGGGGTACACACACCTTGTTGTGCGCCCATaGAATATCTTAGACATCTTA +
Preference number: 3 (lower is better)
Translates to: RLGIVQTCFREMGWGYTHLVVRP*NILDIL
Trigger: TAAGATGTCTAAGATATTCAATGGGCGCACAACAAG...GTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACGTCTGCACAATTCCAAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CAA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTACAGATGTGATTTCCTaGCAGCCTTTTTATGCATCA +
Preference number: 3 (lower is better)
Translates to: HQPHLIHGERVMQTSADITDVIS*QPFYAS
Trigger: TGATGCATAAAAAGGCTGCAAGGAAATCACATCTGT...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CAA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCCCTGACCAATTCCGTTaGACACTAATGTTACTCTAC +
Preference number: 3 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSPDQFR*TLMLLY
Trigger: GTAGAGTAACATTAGTGTCAAACGGAATTGGTCAGG...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 72 bp TCCATGAGTGTTCTGTGCGTGTTGCAAGAGAAACCATaGACTGGTGAATGGCTGTTTGCAAGTTGTACATGT +
Preference number: 3 (lower is better)
Translates to: SMSVLCVLQEKP*TGEWLFASCTC
Trigger: ACATGTACAACTTGCAAACAGCCATTCACCAGTGCATGGTTTCTCTTGCAACACGCACAGAACACTCATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
3UTR GCA 72 bp AGGGAGAGGAGCAAGGTCTGGTTTACTTCTGAGGAGTaGAAATCCTGTTGCTTGAGATTTGCCTTTCTGATT +
Preference number: 3 (lower is better)
Translates to: RERSKVWFTSEE*KSCCLRFAFLI
Trigger: AATCAGAAAGGCAAATCTCAAGCAACAGGATTTGCACTCCTCAGAAGTAAACCAGACCTTGCTCCTCTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CAA 90 bp ATGTCACATAAGGTAAATGTGGTGGATTCAAGAAATACACTCCACAAATGCAGCGCCTATATGGCCACTTaGCCTCTGACACGTCACCAA +
Preference number: 3 (lower is better)
Translates to: MSHKVNVVDSRNTLHKCSAYMAT*PLTRHQ
Trigger: TTGGTGACGTGTCAGAGGCAAAGTGGCCATATAGGC...GCTGCATTTGTGGAGTGTATTTCTTGAATCCACCACATTTACCTTATGTGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR TCA 72 bp GAAATCCAAAATCGACAGATCCAGAGAGAAGGTGTCTaGTGTGTGTACCTATCCTGCCTACATCTGATTCAG +
Preference number: 3 (lower is better)
Translates to: EIQNRQIQREGV*CVYLSCLHLIQ
Trigger: CTGAATCAGATGTAGGCAGGATAGGTACACACATCAGACACCTTCTCTCTGGATCTGTCGATTTTGGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR GCA 72 bp ATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTaGTTCATTAATCATGCCTTACACTTCTGTTCATTT +
Preference number: 3 (lower is better)
Translates to: ISEDDKSPSACS*FINHALHFCSF
Trigger: AAATGAACAGAAGTGTAAGGCATGATTAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR GCA 72 bp CAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTaGTTGAATGCTAACTCACACCTTGCTAACCTCCTG +
Preference number: 3 (lower is better)
Translates to: QAFQLLVWRRIL*LNANSHLANLL
Trigger: CAGGAGGTTAGCAAGGTGTGAGTTAGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 72 bp AAGGTCTGGTTTACTTCTGAGGAGTGCAAATCCTGTTaGTTGAGATTTGCCTTTCTGATTTCCTCCATTCGG +
Preference number: 3 (lower is better)
Translates to: KVWFTSEECKSC*LRFAFLISSIR
Trigger: CCGAATGGAGGAAATCAGAAAGGCAAATCTCAAGCAACAGGATTTGCACTCCTCAGAAGTAAACCAGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 72 bp TATCAAAAACAGCCCAGAGTCGCTCATAGGCAATACTaGATAGTCCTCCAACAGAACAGATTAACACGAGTC +
Preference number: 3 (lower is better)
Translates to: YQKQPRVAHRQY*IVLQQNRLTRV
Trigger: GACTCGTGTTAATCTGTTCTGTTGGAGGACTATGCAGTATTGCCTATGAGCGACTCTGGGCTGTTTTTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CAA 90 bp TTATTTGGCTATCTTTTCACTAAGCTAGGTAATCTAGCCAGAAGGTGGATAGGTTCGCACAACGGCTTCTaGGAGGCTACTGTCAGAAAA +
Preference number: 3 (lower is better)
Translates to: LFGYLFTKLGNLARRWIGSHNGF*EATVRK
Trigger: TTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA...ACCTATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
3UTR-3UTR CAA 90 bp TTACATTGTGTTATAGCAGAAACAGTGGAGTCTGGACTGGACATTTGTAAGGGTACAACTCCTTACTGCTaGGCTACAGCACCTCTGAAA +
Preference number: 3 (lower is better)
Translates to: LHCVIAETVESGLDICKGTTPYC*ATAPLK
Trigger: TTTCAGAGGTGCTGTAGCCAAGCAGTAAGGAGTTGT...ACCCTTACAAATGTCCAGTCCAGACTCCACTGTTTCTGCTATAACACAATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR TCA 72 bp AAAGTAGAAGTCGTGAGATCTGTCCCAGAGAGCAGGTaGAATAATGCACGAGACAGCACTGTATACAGTATA +
Preference number: 3 (lower is better)
Translates to: KVEVVRSVPESR*NNARDSTVYSI
Trigger: TATACTGTATACAGTGCTGTCTCGTGCATTATTTCACCTGCTCTCTGGGACAGATCTCACGACTTCTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646249.1
3UTR TCA 72 bp GGCGAGGTAGGTATACAACAGCACTGGTTTTCTTTTTaGAGGCACCCTTGCAGGTTTCACAATAATTCCATT +
Preference number: 3 (lower is better)
Translates to: GEVGIQQHWFSF*RHPCRFHNNSI
Trigger: AATGGAATTATTGTGAAACCTGCAAGGGTGCCTTCAAAAAGAAAACCAGTGCTGTTGTATACCTACCTCGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CCA 72 bp GTGGAGTCTGGACTGGACATTTGTAAGGGTGACATGTaGCTGTGTAAACCACAAACAAAATCAAGATACATC +
Preference number: 3 (lower is better)
Translates to: VESGLDICKGDM*LCKPQTKSRYI
Trigger: GATGTATCTTGATTTTGTTTGTGGTTTACACAGCCACATGTCACCCTTACAAATGTCCAGTCCAGACTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CCA 72 bp TTTGTAATTATTCATGCACGAAAGGTTTACCTCACCTaGGTCACAGCACTTGTTGTGCGCCCATTGAATATC +
Preference number: 3 (lower is better)
Translates to: FVIIHARKVYLT*VTALVVRPLNI
Trigger: GATATTCAATGGGCGCACAACAAGTGCTGTGACCCAGGTGAGGTAAACCTTTCGTGCATGAATAATTACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CAA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAATTCCATTCACAGCGCTaGCAATGTTGCGTCCAAGTA +
Preference number: 3 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKFHSQR*QCCVQV
Trigger: TACTTGGACGCAACATTGCAAGCGCTGTGAATGGAA...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR GCA 72 bp ATTTGTCTTGGAAGAAAGTGTTCTCCTGGACGGTTCTaGACAGAATTCATTCACAGAGCATGTCTTGGATAT +
Preference number: 3 (lower is better)
Translates to: ICLGRKCSPGRF*TEFIHRACLGY
Trigger: ATATCCAAGACATGCTCTGTGAATGAATTCTGTGCAGAACCGTCCAGGAGAACACTTTCTTCCAAGACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR CCA 72 bp AAAAGTTTAGAAACCAATGCTACACTACAGAGCAAATaGGACTTGAAGGCCAAATTTCCCCTAACTGCCTTC +
Preference number: 3 (lower is better)
Translates to: KSLETNATLQSK*DLKAKFPLTAF
Trigger: GAAGGCAGTTAGGGGAAATTTGGCCTTCAAGTCCCATTTGCTCTGTAGTGTAGCATTGGTTTCTAAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CCA 72 bp TCAGACTTTCTCCTAGAGTTGATCTTACCGGAAATGTaGATGTTATCAAGGAAATCGGAAAGAGAAGGGAGA +
Preference number: 3 (lower is better)
Translates to: SDFLLELILPEM*MLSRKSEREGR
Trigger: TCTCCCTTCTCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAGAAAGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR-3UTR CAA 90 bp ATTTTGATTCTCCTTGAAAATTTATGCCATCTGATAAGCGGTAACCTAGTTCCCTATAGAAACAAGGGGTaGGGGACTCATGCGCATTTC +
Preference number: 3 (lower is better)
Translates to: ILILLENLCHLISGNLVPYRNKG*GTHAHF
Trigger: GAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATA...GGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
3UTR-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGAAACAGCAACATGTTaGCTCAGCAACGAATTAGGG +
Preference number: 3 (lower is better)
Translates to: LYMICITECMQHGLFLSLETATC*LSNELG
Trigger: CCCTAATTCGTTGCTGAGCAAACATGTTGCTGTTTC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR CAA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAATGCGTTCCAGGGCTTTaGCACATTACACATTCAATT +
Preference number: 3 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKCVPGL*HITHSI
Trigger: AATTGAATGTGTAATGTGCAAAAGCCCTGGAACGCA...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR CAA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAACTCTGTCAAACCTTATaGTCAGCCTCTTCCTTTCAA +
Preference number: 3 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKLCQTL*SASSFQ
Trigger: TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAG...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR TCA 72 bp GGAGGAGAGCCACTGAGGCAGCTAATACACAAAACATaGTCAAAAGTGATTAACAACAGCTTCATATGCAAA +
Preference number: 3 (lower is better)
Translates to: GGEPLRQLIHKT*SKVINNSFICK
Trigger: TTTGCATATGAAGCTGTTGTTAATCACTTTTGATCATGTTTTGTGTATTAGCTGCCTCAGTGGCTCTCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR GCA 72 bp AAAAGCACACTACATAACAAACCAACGTTATTAGCTTaGAGTACTGCATACAGTATGGCAGCAGGAAAAAGG +
Preference number: 3 (lower is better)
Translates to: KSTLHNKPTLLA*STAYSMAAGKR
Trigger: CCTTTTTCCTGCTGCCATACTGTATGCAGTACTGCAAGCTAATAACGTTGGTTTGTTATGTAGTGTGCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR GCA 72 bp TCGGAGAGACAAGTTCCAGTGAATCAATTCATGATATaGACTACCTTTCCTAAAACTGAACAAACCTCTTGC +
Preference number: 3 (lower is better)
Translates to: SERQVPVNQFMI*TTFPKTEQTSC
Trigger: GCAAGAGGTTTGTTCAGTTTTAGGAAAGGTAGTGCATATCATGAATTGATTCACTGGAACTTGTCTCTCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CAA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCTCTGTCAAACCTTATaGTCAGCCTCTTCCTTTCAA +
Preference number: 3 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLLCQTL*SASSFQ
Trigger: TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR CAA 90 bp TTTAGACAACCAGGGAGTTCAAGCAAATATCTCTTATTTCCCTACATAGATTCAAAGGAGGGAGGGCTGTaGAATACGTGTGTGTATTTT +
Preference number: 3 (lower is better)
Translates to: FRQPGSSSKYLLFPYIDSKEGGL*NTCVYF
Trigger: AAAATACACACACGTATTCAACAGCCCTCCCTCCTT...TGAATCTATGTAGGGAAATAAGAGATATTTGCTTGAACTCCCTGGTTGTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR-3UTR CAA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTAGGTGCAATTGTTCATaGGCAATGCTAACAACAGTG +
Preference number: 3 (lower is better)
Translates to: VYLELVKENTSGLVLLVFRCNCS*AMLTTV
Trigger: CACTGTTGTTAGCATTGCCAATGAACAATTGCACCT...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR TCA 72 bp ACCATAAGGTACACAAATACATCCTCCAGTTCAGTCTaGGCTAGGAGAGAATCAGAATGGATACAAAAAGAA +
Preference number: 3 (lower is better)
Translates to: TIRYTNTSSSSV*ARRESEWIQKE
Trigger: TTCTTTTTGTATCCATTCTGATTCTCTCCTAGCTCAGACTGAACTGGAGGATGTATTTGTGTACCTTATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR GCA 72 bp AGTGTATTCTGTTTCCATTCACAGCGCTTGCAATGTTaGGTCCAAGTAAGTAAGCTCAATAGTCAAGTAAAT +
Preference number: 3 (lower is better)
Translates to: SVFCFHSQRLQC*VQVSKLNSQVN
Trigger: ATTTACTTGACTATTGAGCTTACTTACTTGGACGCAACATTGCAAGCGCTGTGAATGGAAACAGAATACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR-3UTR CAA 90 bp TTTAGACAACCAGGGAGTTCAAGCAAATATCTCTTATTTCCCTACATAGATTCAGACAGACACTGTGTTTaGTCTTTTAAACGAGCAGCT +
Preference number: 3 (lower is better)
Translates to: FRQPGSSSKYLLFPYIDSDRHCV*SFKRAA
Trigger: AGCTGCTCGTTTAAAAGACAAAACACAGTGTCTGTC...TGAATCTATGTAGGGAAATAAGAGATATTTGCTTGAACTCCCTGGTTGTCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR TCA 72 bp CTGGGAAAATTGTACAGTGCACTTAATTGTCCTATCTaGGCAGGTTTATTTTATACTCAACCTCTGTATCTC +
Preference number: 3 (lower is better)
Translates to: LGKLYSALNCPI*AGLFYTQPLYL
Trigger: GAGATACAGAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACAATTTTCCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR TCA 72 bp AGAATTCATTCACAGAGCATGTCTTGGATATACAGCTaGCTAGATATGTCAGTTATGTTCCAAATGGGTTTT +
Preference number: 3 (lower is better)
Translates to: RIHSQSMSWIYS*LDMSVMFQMGF
Trigger: AAAACCCATTTGGAACATAACTGACATATCTAGTCAGCTGTATATCCAAGACATGCTCTGTGAATGAATTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR CCA 72 bp ACTGTACATGATATGTATTACAGAATGTATGCAGCATaGTCTTTTTCTCTCTCTCTCTCTTTTTCTCTCAGA +
Preference number: 3 (lower is better)
Translates to: TVHDMYYRMYAA*SFSLSLSFSLR
Trigger: TCTGAGAGAAAAAGAGAGAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
3UTR CCA 72 bp TCTTGCAACTTTTCCCTTAAGTATAGACCTGTAAACTaGGAAAATTGTACAGTGCACTTAATTGTCCTATCT +
Preference number: 3 (lower is better)
Translates to: SCNFSLKYRPVN*ENCTVHLIVLS
Trigger: AGATAGGACAATTAAGTGCACTGTACAATTTTCCCAGTTTACAGGTCTATACTTAAGGGAAAAGTTGCAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp TCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCCAGGACCTGGTGGAAGGCGTCTGCCCTCTTTTaGGCTGGGCCTGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SASARWPRLCFSPRTWWKASALF*AGPARA
Trigger: GGCCCGGGCAGGCCCAGCTCAAAAGAGGGCAGACGC...CTTCCACCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp AGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCGCCGCGGCGGTGGCGTaGCCGGGAGAGAAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SRMTDHADVDWAARVHPTAAAVA*PGEKKG
Trigger: CCCTTTCTTCTCTCCCGGCCACGCCACCGCCGCGGC...GGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CCA 90 bp GCCCACGACCGCGCCCCGCGAGCTGTTCTCGTGGTGGCGCGCCGCCTCCAGGCTGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: AHDRAPRAVLVVARRLQAAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...AGCCTGGAGGCGGCGCGCCACCACGAGAACAGCTCGCGGGGCGCGGTCGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp AGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTTGCCCACCAAGTCGCTaGTGCCGGGTTCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RMTDHADVDWAARVHPTPCPPSR*CRVPGS
Trigger: GCTCCCCGGAACCCGGCACCAGCGACTTGGTGGGCA...AGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000631857.1
CDS-3UTR CCA 90 bp ATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGTCGGCCTCGGCCAGGTaGCCGCGCTTATGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: MTDHADVDWAARVHPTPGSASAR*PRLCFS
Trigger: CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGA...CCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000631857.1
CDS-3UTR TCA 90 bp GCGCCCCGCGAGCTGTTCTCGTGGTGGCGCGCCGCCTCCAGGCTCAGCCCGAAGATGGCGCAGGGAAGATaGATTGTGGGAGAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: APRELFSWWRAASRLSPKMAQGR*IVGEPS
Trigger: TGACGGCTCTCCCACAATTCATCTTCCCTGCGCCAT...CTTCGGGCTGAGCCTGGAGGCGGCGCGCCACCACGAGAACAGCTCGCGGGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp CAAGTGTCCCTGTGGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGGATGACAGACCACGCTaGCGTCGACTGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: QVSLWPSASARWPRLCFSDDRPR*RRLGGT
Trigger: CGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC...CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp AGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCGATGACAGACCACGCTaGCGTCGACTGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: SRMTDHADVDWAARVHPTDDRPR*RRLGGT
Trigger: CGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC...GGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000631857.1
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCGCTTGCGGCGAGACATaGTGGGCTGCGGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GWFQKGQGITHDSDGPRAACGET*WAAGRA
Trigger: CGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGC...GGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp AGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCGGCCCAGGAAGAAGCTaGCGCTCAGCTACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SRMTDHADVDWAARVHPTGPGRS*RSATGA
Trigger: GGCCCCTGTAGCTGAGCGCCAGCTTCTTCCTGGGCC...GGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp ATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGCAGGTGAGGAGGTCATaGTCCCCTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: MTDHADVDWAARVHPTPGQVRRS*SPSGAP
Trigger: GGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTG...CCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000631857.1
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR TCA 90 bp GGCGGTGGAGAGACCGTCGTCGGACTTGACCGTCATGGGGGACGATTTGTGCATGCACCATGCCCTGCATaGCGTCGGGCAGGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GGGETVVGLDRHGGRFVHAPCPA*RRAGRG
Trigger: GCCGCGCCCTGCCCGACGTCATGCAGGGCATGGTGC...ATGCACAAATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCTCTCCACCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp ACTAGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCCCGAATGGGGGTGTGTaGAGAACCCGCGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TSRMTDHADVDWAARVHPPNGGV*RTRGVR
Trigger: CCTGACCCCGCGGGTTCTTCACACACCCCCATTCGG...GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp TCCGTGTTGGGCATCGCGGCCGGGGGCAGGTCGAACTCCTTCTCGAGCTTGATGCCACCAAGTCGCTGGTaGCGGGTTCCGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVLGIAAGGRSNSFSSLMPPSRW*RVPGSW
Trigger: CCAGCTCCCCGGAACCCGGCACCAGCGACTTGGTGG...CATCAAGCTCGAGAAGGAGTTCGACCTGCCCCCGGCCGCGATGCCCAACACGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp AGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTCAGTGCCATCGTCTATaGGGTCCGACTCGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: RMTDHADVDWAARVHPTPQCHRL*GPTRRP
Trigger: TGGCCGGCGAGTCGGACCGCATAGACGATGGCACTG...AGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000631857.1
CDS-3UTR GCA 90 bp GCCCACGACCGCGCCCCGCGAGCTGTTCTCGTGGTGGCGCGCCGCCTCCAGGCTAAGAACAAGTGTCGCTaGGTCTGCCCTCTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: AHDRAPRAVLVVARRLQAKNKCR*VCPLLS
Trigger: GCTCAAAAGAGGGCAGACGCAGCGACACTTGTTCTT...AGCCTGGAGGCGGCGCGCCACCACGAGAACAGCTCGCGGGGCGCGGTCGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp GGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCCCCGAGCCCGCGGCTaGGCTCGGGAAACTTTGCCC +
Preference number: 4 (lower is better)
Translates to: GWFQKGQGITHDSDGPRAPRARG*ARETLP
Trigger: GGGCAAAGTTTCCCGAGCGCAGCCGCGGGCTCGGGG...GGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CCA 90 bp ATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGGCTGCAGGCCTAGGCTaGAAGGACTCTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: MTDHADVDWAARVHPTPGAAGLG*KDSAGL
Trigger: GAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGC...CCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CAAGTGTCCCTGTGGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCTTGGCGACAGGGCTaGACCTTTGCACTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QVSLWPSASARWPRLCFSPWRQG*TFALAA
Trigger: GGCTGCCAGTGCAAAGGTCCAGCCCTGTCGCCAAGG...CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp AGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTCAGGTGAGGAGGTCATaGTCCCCTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RMTDHADVDWAARVHPTPQVRRS*SPSGAP
Trigger: GGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTG...AGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000631857.1
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR GCA 90 bp CCCTCTTTTGAGCTGGGCCTGCCCGGGCCCGGACCACTAATATGGGGCGTGCTCTGTGGCGCTTCAGCTTaGTGGCCTGGGTGCACGCGT +
Preference number: 4 (lower is better)
Translates to: PSFELGLPGPGPLIWGVLCGASA*WPGCTR
Trigger: ACGCGTGCACCCAGGCCAGCAAGCTGAAGCGCCACA...GAGCACGCCCCATATTAGTGGTCCGGGCCCGGGCAGGCCCAGCTCAAAAGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp TCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCCAGGACCTGGTGGAAGCTGCGGGGCATATTCTaGACTCATCCCAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: SASARWPRLCFSPRTWWKLRGIF*THPRRG
Trigger: CCCACGCCTGGGATGAGTGCAGAATATGCCCCGCAG...CTTCCACCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp CAAGTGTCCCTGTGGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGTTCTCGCCCAGGACCTaGTGGAAGGCCTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QVSLWPSASARWPRLCFSFSPRT*WKASLK
Trigger: CTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGAGAA...CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp TCCGTGTTGGGCATCGCGGCCGGGGGCAGGTCGAACTCCTTCTCGAGCTTGATGACACGTTCTCCGTGTTaGGCATCGCGGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: SVLGIAAGGRSNSFSSLMTRSPC*ASRPGA
Trigger: TGCCCCCGGCCGCGATGCCCAACACGGAGAACGTGT...CATCAAGCTCGAGAAGGAGTTCGACCTGCCCCCGGCCGCGATGCCCAACACGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp GGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCTGCCCTCTTTTGAGCTaGGCCTGCCCGGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: GWFQKGQGITHDSDGPRACPLLS*ACPGPD
Trigger: GTCCGGGCCCGGGCAGGCCCAGCTCAAAAGAGGGCA...GGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356842.9
3UTR CAA 72 bp GGGTCGTTCTCGCTCTTGAACTTGGCCACCACGGACTaGAGCGCGCTGCTGGCGCTGCCCACCAAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: GSFSLLNLATTD*SALLALPTKSL
Trigger: CAGCGACTTGGTGGGCAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp ACTAGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCCAGGTGAGGAGGTCATaGTCCCCTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TSRMTDHADVDWAARVHPQVRRS*SPSGAP
Trigger: GGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTG...GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR TCA 90 bp ACTAGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCGGCACTGCCCACAGGTaGGGAGGTCATGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: TSRMTDHADVDWAARVHPGTAHR*GGHDPL
Trigger: AAGGGGATCATGACCTCCTCACCTGTGGGCAGTGCC...GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR TCA 90 bp TCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCCAGGACCTGGTGGAAGGGTCGTTCTCGCTCTTaGACTTGGCCACCACGGACT +
Preference number: 4 (lower is better)
Translates to: SASARWPRLCFSPRTWWKGRSRS*TWPPRT
Trigger: AGTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACC...CTTCCACCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACGCACCATGCCCTGCATaGCGTCGGGCAGGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYAPCPA*RRAGRG
Trigger: GCCGCGCCCTGCCCGACGTCATGCAGGGCATGGTGC...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp AGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCGCCTCGCTGAAGTGCTaGATGGAGCTGAGCACCATG +
Preference number: 4 (lower is better)
Translates to: SRMTDHADVDWAARVHPTASLKC*MELSTM
Trigger: CATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGC...GGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000631857.1
CDS-3UTR GCA 90 bp AGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCAAGGCCTCGCTGAAGTaGTGCATGGAGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: SRMTDHADVDWAARVHPTKASLK*CMELST
Trigger: GGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTT...GGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000631857.1
CDS-3UTR GCA 90 bp AGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCGTTCTCCGAGGAGTaGTCCGACGAGGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: SRMTDHADVDWAARVHPTPFSEE*SDEEAK
Trigger: TTTTGCCTCCTCGTCGGAGCACTCCTCGGAGAACGG...GGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000631857.1
CDS-3UTR GCA 90 bp GGCGGTGGAGAGACCGTCGTCGGACTTGACCGTCATGGGGGACGATTTGTGCATCACTTCCCGTGCCGCTaGGCCCCGAGATCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: GGGETVVGLDRHGGRFVHHFPCR*APRSLR
Trigger: ACGGAGGGATCTCGGGGCGCAGCGGCACGGGAAGTG...ATGCACAAATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCTCTCCACCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp AGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGCTTGCGGCGAGACATaGTGGGCTGCGGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RLAGFRRARASLMTAMVHACGET*WAAGRA
Trigger: CGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGC...GTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp ATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: MTDHADVDWAARVHPTPGAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...CCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000631857.1
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR CCA 90 bp TGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACCGGGTTCCGGGGAGCTaGCGGTGGAGAGACCGTCGT +
Preference number: 4 (lower is better)
Translates to: WRCRPRLEGLCRTLSSHNRVPGS*RWRDRR
Trigger: ACGACGGTCTCTCCACCGCCAGCTCCCCGGAACCCG...GTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp AAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACCACGCTGACGTCGACTaGGCGGCACGCGTCCACCCC +
Preference number: 4 (lower is better)
Translates to: KWRCRPRLEGLCRTLSSHHADVD*AARVHP
Trigger: GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTG...GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGCACGCTGACGTCGACTaGGCGGCACGCGTCCACCCC +
Preference number: 4 (lower is better)
Translates to: GLGWKDSAGLCLRTTASWHADVD*AARVHP
Trigger: GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTG...CCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp ATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGGGGTACTACGCCGAATaGGGGTGTGTGAAGAACCTG +
Preference number: 4 (lower is better)
Translates to: MTDHADVDWAARVHPTPGGYYAE*GCVKNL
Trigger: CAGGTTCTTCACACACCCCCATTCGGCGTAGTACCC...CCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCAT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000358510.6
3UTR CAA 72 bp TCCGGGATCAGGTTGGGGTCGTTCTCGCTCTTGAACTaGGCCACCACGGACTTGAGCGCGCTGCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SGIRLGSFSLLN*ATTDLSALLAL
Trigger: CAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCCCAACCTGATCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp TGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGATGACAGACCACGCTaGCGTCGACTGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: WRCRPRLEGLCRTLSSHNDDRPR*RRLGGT
Trigger: CGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC...GTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp TGGTGGAAGGCCTCGCTGAAGTGCTGCATGGAGCTGAGCACCATGCCCTGCATGCTGAGCACCATGCCCTaGATGACGTCGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: WWKASLKCCMELSTMPCMLSTMP*MTSGRA
Trigger: CGCCCTGCCCGACGTCATGCAGGGCATGGTGCTCAG...CATGCAGGGCATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTTCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp ACTAGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCAAGGCCTCGCTGAAGTaGTGCATGGAGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: TSRMTDHADVDWAARVHPKASLK*CMELST
Trigger: GGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTT...GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp CCCTCTTTTGAGCTGGGCCTGCCCGGGCCCGGACCACTAATATGGGGCGTGCTCAAGGCCTCGCTGAAGTaGTGCATGGAGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: PSFELGLPGPGPLIWGVLKASLK*CMELST
Trigger: GGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTT...GAGCACGCCCCATATTAGTGGTCCGGGCCCGGGCAGGCCCAGCTCAAAAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp AAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACCACTTCCCGTGCCGCTaGGCCCCGAGATCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: KWRCRPRLEGLCRTLSSHHFPCR*APRSLR
Trigger: ACGGAGGGATCTCGGGGCGCAGCGGCACGGGAAGTG...GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp GGCCCATCACCACATCCGACAAGCAGGTGCACTCCCAGTGTTCAGAACTGGAATGCTTGCGGCGAGACATaGTGGGCTGCGGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GPSPHPTSRCTPSVQNWNACGET*WAAGRA
Trigger: CGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGC...ATTCCAGTTCTGAACACTGGGAGTGCACCTGCTTGTCGGATGTGGTGATGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp CGAGTACACGTTCTCCGTGTTGGGCATCGCGGCCGGGGGCAGGTCGAACTCCTTGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RVHVLRVGHRGRGQVELLVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...AAGGAGTTCGACCTGCCCCCGGCCGCGATGCCCAACACGGAGAACGTGTACTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp CTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGAGGGCTGGGCCGGCCTaGGGACAGCGGTGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: LGWKDSAGLCLRTTASWRRAGPA*GQRWAR
Trigger: TCTAGCCCACCGCTGTCCCCAGGCCGGCCCAGCCCT...CCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp AGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTCGCGAGCTGTTCTCGTaGTGGCGCGCCGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RLEGLCRTLSSHNGFLEARELFS*WRAASR
Trigger: CCTGGAGGCGGCGCGCCACCACGAGAACAGCTCGCG...AGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp CTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCGCGAGCTGTTCTCGTaGTGGCGCGCCGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGWKDSAGLCLRTTASWRRELFS*WRAASR
Trigger: CCTGGAGGCGGCGCGCCACCACGAGAACAGCTCGCG...CCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp ACTAGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCCCCGGACCACTAATATaGGGCGTGCTCCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: TSRMTDHADVDWAARVHPPGPLI*GVLPPL
Trigger: AAGTGGAGGGAGCACGCCCCATATTAGTGGTCCGGG...GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp AGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCACTCATCCCAGGCGTaGGGATTAGAGCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: SRMTDHADVDWAARVHPTHSSQA*GLELHV
Trigger: CACATGGAGCTCTAATCCCCACGCCTGGGATGAGTG...GGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000631857.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCACGCTGACGTCGACTaGGCGGCACGCGTCCACCCC +
Preference number: 4 (lower is better)
Translates to: LGWKDSAGLCLRTTASWRHADVD*AARVHP
Trigger: GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTG...CCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: GWFQKGQGITHDSDGPRARHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...GGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp AAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACCGCATGACTTGGACTTaGCCGGGGGCTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KWRCRPRLEGLCRTLSSHRMTWT*PGAGRE
Trigger: CTCCCTCCCAGCCCCCGGTCAAGTCCAAGTCATGCG...GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp CAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGCCCCCAGGCGCTCTATaGGGTGGGGGTCCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: QKGQGITHDSDGPRALSMPPGAL*GGGPSD
Trigger: ATCACTTGGACCCCCACCGCATAGAGCGCCTGGGGG...CATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp ATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGATGGGGGACGATTTGTaGATGTGCGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: MTDHADVDWAARVHPTPGMGDDL*MCVFMW
Trigger: CCACATGAAGACGCACATGCACAAATCGTCCCCCAT...CCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000631857.1
CDS-3UTR GCA 90 bp AGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTCCACCAAGTCGCTGGTaGCGGGTTCCGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RLEGLCRTLSSHNGFLEAPPSRW*RVPGSW
Trigger: CCAGCTCCCCGGAACCCGGCACCAGCGACTTGGTGG...AGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp TGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACAGGTGGCCGCGCTTATaGTTCTCGCCCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: WRCRPRLEGLCRTLSSHNRWPRL*FSPRTW
Trigger: CCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCT...GTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp CGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTCAGCGAGCTGGGGCTaGCCAGCAGCAGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: RCRPRLEGLCRTLSSHNGSASWG*PAAAFW
Trigger: CCAAAAAGCTGCTGCTGGGCAGCCCCAGCTCGCTGA...GCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp GGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGGGACTGCTGCGGGGCATATTCTaGACTCATCCCAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GQGITHDSDGPRALSMGLLRGIF*THPRRG
Trigger: CCCACGCCTGGGATGAGTGCAGAATATGCCCCGCAG...CAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR GCA 90 bp CTCGCCCGGGGAGCAGCCGCGGCCATTAACAGTGCCATCGTCTATGCGGTCCGAATAGCTGGAGGCCTGTaGATTTCCCTGAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LARGAAAAINSAIVYAVRIAGGL*ISLRVS
Trigger: GGAGACCCTCAGGGAAATGCACAGGCCTCCAGCTAT...TCGGACCGCATAGACGATGGCACTGTTAATGGCCGCGGCTGCTCCCCGGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp CAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGCACTCGGGTGATGGGTaGCCAGGGCCATCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: QKGQGITHDSDGPRALSMHSGDG*PGPSLP
Trigger: CGGAAGAGATGGCCCTGGCCACCCATCACCCGAGTG...CATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp GGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTATGCCCACCAAGTCGCTaGTGCCGGGTTCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GWKDSAGLCLRTTASWRLCPPSR*CRVPGS
Trigger: GCTCCCCGGAACCCGGCACCAGCGACTTGGTGGGCA...TAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp ATTCTGCACTCATCCCAGGCGTGGGGATTAGAGCTCCATGTGCAGAACGAGGGGGAGCTGTTCTCGTGGTaGCGCGCCGCCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ILHSSQAWGLELHVQNEGELFSW*RAASRL
Trigger: GAGCCTGGAGGCGGCGCGCCACCACGAGAACAGCTC...CCCCTCGTTCTGCACATGGAGCTCTAATCCCCACGCCTGGGATGAGTGCAGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp AGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGTACTACGCCGAATaGGGGTGTGTGAAGAACAAG +
Preference number: 4 (lower is better)
Translates to: RMTDHADVDWAARVHPTPGYYAE*GCVKNK
Trigger: CTTGTTCTTCACACACCCCCATTCGGCGTAGTACCC...AGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000631857.1
3UTR CAA 72 bp CCGTTCTCCGGGATCAGGTTGGGGTCGTTCTCGCTCTaGAACTTGGCCACCACGGACTTGAGCGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PFSGIRLGSFSL*NLATTDLSALL
Trigger: CAGCAGCGCGCTCAAGTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCCCAACCTGATCCCGGAGAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp GGCGGTGGAGAGACCGTCGTCGGACTTGACCGTCATGGGGGACGATTTGTGCATCAGGTGAGGAGGTCATaGTCCCCTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GGGETVVGLDRHGGRFVHQVRRS*SPSGAP
Trigger: GGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTG...ATGCACAAATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCTCTCCACCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp ACTAGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCAACTGCCACACATCTTaGGCTCTCTGGGTACTACGC +
Preference number: 4 (lower is better)
Translates to: TSRMTDHADVDWAARVHPNCHTS*ALWVLR
Trigger: GCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTT...GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp CAAGTGTCCCTGTGGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGGCGAGAATTCCCGTTTaGTTAAGTGCTGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: QVSLWPSASARWPRLCFSARIPV*LSAGVC
Trigger: GCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGC...CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp ATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGGTGTTCTGTGCGTGTTaGAAGAGAAACCATGCACTG +
Preference number: 4 (lower is better)
Translates to: MTDHADVDWAARVHPTPGVFCAC*KRNHAL
Trigger: CAGTGCATGGTTTCTCTTGCAACACGCACAGAACAC...CCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000631857.1
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGGGACTGGGTTGCAGTAACCTTTaGATAGGGCTGGGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: GQGITHDSDGPRALSMGLGCSNL*IGLGRP
Trigger: AGGCCGGCCCAGCCCTATGCAAAGGTTACTGCAACC...CAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp GTGGAGAGACCGTCGTCGGACTTGACCGTCATGGGGGACGATTTGTGCATGTGCAGGTGGCCGCGCTTATaGTTCTCGCCCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: VERPSSDLTVMGDDLCMCRWPRL*FSPRTW
Trigger: CCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCT...GCACATGCACAAATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCTCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp TTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGGCTTGCGGCGAGACATaGTGGGCTGCGGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: FSKALDLRRRQIPFRLLLACGET*WAAGRA
Trigger: CGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGC...CAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp TGGTGGAAGGCCTCGCTGAAGTGCTGCATGGAGCTGAGCACCATGCCCTGCATGTCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: WWKASLKCCMELSTMPCMSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...CATGCAGGGCATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTTCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp TGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACTCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: WRCRPRLEGLCRTLSSHNSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...GTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GGCTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCATCCCAGGCGTGCGCGAGCTGTTCTCGTaGTGGCGCGCCGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSSLQIPCGAYSALIPGVRELFS*WRAASR
Trigger: CCTGGAGGCGGCGCGCCACCACGAGAACAGCTCGCG...CACGCCTGGGATGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp GGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGGGACTGGGGTACTACGCCGAATaGGGGTGTGTGAAGAACCCG +
Preference number: 4 (lower is better)
Translates to: GQGITHDSDGPRALSMGLGYYAE*GCVKNP
Trigger: CGGGTTCTTCACACACCCCCATTCGGCGTAGTACCC...CAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAACACGCTGACGTCGACTaGGCGGCACGCGTCCACCCC +
Preference number: 4 (lower is better)
Translates to: DSAGLCLRTTASWRLLSEHADVD*AARVHP
Trigger: GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTG...TTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp ATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGATAGAAACAAGGGGTTaGGGACTCATGCGCATTTCC +
Preference number: 4 (lower is better)
Translates to: MTDHADVDWAARVHPTPGIETRG*GLMRIS
Trigger: GGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTAT...CCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACTGGCCACCACGGACTTaGGCGCGCTGCTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENWPPRT*ARCWRC
Trigger: GCAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCA...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp GGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGCACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 4 (lower is better)
Translates to: GAAGLGWKDSAGLCLRTTHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...CGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACCCAGGGCATCACTCATaGCAGCGATGGTCCACGGGC +
Preference number: 4 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYPGHHS*QRWSTG
Trigger: GCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGG...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTTGCTGGGGTTTGCCTTaGTTGCGGCGAGACATGGTG +
Preference number: 4 (lower is better)
Translates to: GFRRARASLMTAMVHGPSCWGLP*LRRDMV
Trigger: CACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCA...AGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR GCA 90 bp AGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGTGTTCTGTGCGTGTTaGAAGAGAAACCATGCACTG +
Preference number: 4 (lower is better)
Translates to: RMTDHADVDWAARVHPTPVFCAC*KRNHAL
Trigger: CAGTGCATGGTTTCTCTTGCAACACGCACAGAACAC...AGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000631857.1
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACGCGCGCTGCTGGCGCTaGCCACCAAGTCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENARCWR*PPSRWC
Trigger: GCACCAGCGACTTGGTGGGCAGCGCCAGCAGCGCGC...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp TGCTCCGCGGGGTCAGGGGACTTCCGTGTTCGCTTTCTAAGTAGATTCTTAATCGCGCGCTGCTGGCGCTaGCCACCAAGTCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CSAGSGDFRVRFLSRFLIARCWR*PPSRWC
Trigger: GCACCAGCGACTTGGTGGGCAGCGCCAGCAGCGCGC...GATTAAGAATCTACTTAGAAAGCGAACACGGAAGTCCCCTGACCCCGCGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp CGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: RCRPRLEGLCRTLSSHNGAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...GCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR CCA 90 bp CGAGTACACGTTCTCCGTGTTGGGCATCGCGGCCGGGGGCAGGTCGAACTCCTTACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: RVHVLRVGHRGRGQVELLTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...AAGGAGTTCGACCTGCCCCCGGCCGCGATGCCCAACACGGAGAACGTGTACTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp ATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGCCATGCACTGGTGAATaGCTGTTTGCAAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: MTDHADVDWAARVHPTPGPCTGE*LFASCT
Trigger: TGTACAACTTGCAAACAGCCATTCACCAGTGCATGG...CCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000631857.1
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGGCCTGGGGACAGCGGTaGGCTAGACGTGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: WKDSAGLCLRTTASWRLLAWGQR*ARRVPC
Trigger: GCAGGGAACACGTCTAGCCCACCGCTGTCCCCAGGC...CAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp GACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAACGGGTTCCGGGGAGCTaGCGGTGGAGAGACCGTCGT +
Preference number: 4 (lower is better)
Translates to: DSAGLCLRTTASWRLLSERVPGS*RWRDRR
Trigger: ACGACGGTCTCTCCACCGCCAGCTCCCCGGAACCCG...TTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp CTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGTCGCCCAGGACCTGGTaGAAGGCCTCGCTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LGWKDSAGLCLRTTASWRSPRTW*KASLKC
Trigger: GCACTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGA...CCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp GGCTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCATCCCAGGCGTGAGGGGCTCAGCGAGCTaGGGCTGCCCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSSLQIPCGAYSALIPGVRGSAS*GCPAAA
Trigger: AGCTGCTGCTGGGCAGCCCCAGCTCGCTGAGCCCCT...CACGCCTGGGATGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp TGGTGGAAGGCCTCGCTGAAGTGCTGCATGGAGCTGAGCACCATGCCCTGCATGCCCGGACCACTAATATaGGGCGTGCTCCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: WWKASLKCCMELSTMPCMPGPLI*GVLPPL
Trigger: AAGTGGAGGGAGCACGCCCCATATTAGTGGTCCGGG...CATGCAGGGCATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTTCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp CTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCATCCCAGGCGTGGGTGCCCTCTTTTGAGCTaGGCCTGCCCGGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: LIFTNTLRGIFCTHPRRGCPLLS*ACPGPD
Trigger: GTCCGGGCCCGGGCAGGCCCAGCTCAAAAGAGGGCA...CCCACGCCTGGGATGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp GCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCCACGCTGACGTCGACTaGGCGGCACGCGTCCACCCC +
Preference number: 4 (lower is better)
Translates to: AGLCLRTTASWRLLSENIHADVD*AARVHP
Trigger: GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTG...GATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTGAGCTCTCTGCACGCTGACGTCGACTaGGCGGCACGCGTCCACCCC +
Preference number: 4 (lower is better)
Translates to: LKGSRASIRKLPHILSSLHADVD*AARVHP
Trigger: GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTG...CAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479026.2
ENST00000631857.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGGCTGCAGGCCTAGGCTaGAAGGACTCTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: GLGWKDSAGLCLRTTASWAAGLG*KDSAGL
Trigger: GAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGC...CCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGGGACTGCTCCTACCCACCCGATaGGTGTCTGTAGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: GQGITHDSDGPRALSMGLLLPTR*VSVGNR
Trigger: CCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAG...CAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
3UTR CAA 72 bp AGCACCTTGTTTTCACCACCAGGGCACTCGTGTACCTaGAGGGAGACACTGGGAGCCCAGGGAGCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: STLFSPPGHSCT*RETLGAQGAWR
Trigger: TCTCCAGGCTCCCTGGGCTCCCAGTGTCTCCCTCAAGGTACACGAGTGCCCTGGTGGTGAAAACAAGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp ACTAGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCTTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: TSRMTDHADVDWAARVHPFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp AGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACCGGTGGGGGTCCAAGTaGTGTCTCGGTGGTGGACTA +
Preference number: 4 (lower is better)
Translates to: RLAGFRRARASLMTAMVHRWGSK*CLGGGL
Trigger: TAGTCCACCACCGAGACATCACTTGGACCCCCACCG...GTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR TCA 90 bp GGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTAGACCGTCGTCGGACTTaGCCGTCATGGGGGACGATT +
Preference number: 4 (lower is better)
Translates to: GWKDSAGLCLRTTASWRLDRRRT*PSWGTI
Trigger: AATCGTCCCCCATGACGGTCAAGTCCGACGACGGTC...TAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp CAAACTCCCGTTCTCCGAGGAGTGCTCCGACGAGGAGGCAAAAGGCGATTGTCTGACCGTCGTCGGACTTaGCCGTCATGGGGGACGATT +
Preference number: 4 (lower is better)
Translates to: QTPVLRGVLRRGGKRRLSDRRRT*PSWGTI
Trigger: AATCGTCCCCCATGACGGTCAAGTCCGACGACGGTC...AGACAATCGCCTTTTGCCTCCTCGTCGGAGCACTCCTCGGAGAACGGGAGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp GACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAGCACCATGCCCTGCATaGCGTCGGGCAGGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: DSVFAQRLLGGYCQKTSQAPCPA*RRAGRG
Trigger: GCCGCGCCCTGCCCGACGTCATGCAGGGCATGGTGC...TTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp CAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCAGCGTCTGCCCTCTTTTaGGCTGGGCCTGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QDSVFAQRLLGGYCQKTSASALF*AGPARA
Trigger: GGCCCGGGCAGGCCCAGCTCAAAAGAGGGCAGACGC...TGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp GGCTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCATCCCAGGCGTGGATGACAGACCACGCTaGCGTCGACTGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: GSSLQIPCGAYSALIPGVDDRPR*RRLGGT
Trigger: CGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC...CACGCCTGGGATGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GGTGATTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCCGCTTCAGGGGCACCTaGGGGCCAGAGCGTCGGAAT +
Preference number: 4 (lower is better)
Translates to: GDLARLWISEDDKSPSACRFRGT*GPERRN
Trigger: ATTCCGACGCTCTGGCCCTCAGGTGCCCCTGAAGCG...GCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp AGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCTCCATGAGTGTTCTGTaGGTGTTGCAAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: SRMTDHADVDWAARVHPTSMSVL*VLQEKP
Trigger: TGGTTTCTCTTGCAACACGCACAGAACACTCATGGA...GGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000631857.1
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATGCGCGCTGCTGGCGCTaGCCACCAAGTCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHARCWR*PPSRWC
Trigger: GCACCAGCGACTTGGTGGGCAGCGCCAGCAGCGCGC...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp AGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTTCTTTACAAATACCCTaGGGGGCATATTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: RMTDHADVDWAARVHPTPSLQIP*GAYSAL
Trigger: GAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGA...AGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000631857.1
ENST00000647472.1
CDS-3UTR GCA 90 bp AGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCTCTTTACAAATACCCTaGGGGGCATATTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: SRMTDHADVDWAARVHPTSLQIP*GAYSAL
Trigger: GAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGA...GGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000631857.1
ENST00000647472.1
CDS-3UTR GCA 90 bp TGCTCCGCGGGGTCAGGGGACTTCCGTGTTCGCTTTCTAAGTAGATTCTTAATCGTGTGGCTGCGCCGGTaGACCACCAGGTTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: CSAGSGDFRVRFLSRFLIVWLRR*TTRLLR
Trigger: GCGGAGCAACCTGGTGGTGCACCGGCGCAGCCACAC...GATTAAGAATCTACTTAGAAAGCGAACACGGAAGTCCCCTGACCCCGCGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCAGTGCAGGCAGCAGGCTaGCCCAAGCAGATAGGAGGG +
Preference number: 4 (lower is better)
Translates to: WCIRQSCTARCLRGATCAVQAAG*PKQIGG
Trigger: CCCTCCTATCTGCTTGGGGCAGCCTGCTGCCTGCAC...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACGCTTGCGGCGAGACATaGTGGGCTGCGGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LCLRTTASWRLLSENITNACGET*WAAGRA
Trigger: CGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGC...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp GACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAGCTTGCGGCGAGACATaGTGGGCTGCGGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: DSVFAQRLLGGYCQKTSQACGET*WAAGRA
Trigger: CGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGC...TTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp GGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCGTTTGCTTAAGTGCTaGGGTTTGCCTTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GWFQKGQGITHDSDGPRARLLKC*GLPCLR
Trigger: CCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACG...GGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp ACTAGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: TSRMTDHADVDWAARVHPQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR CCA 90 bp CGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: RCRPRLEGLCRTLSSHNGTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...GCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TGCTCCGCGGGGTCAGGGGACTTCCGTGTTCGCTTTCTAAGTAGATTCTTAATCTCGCAAGTGTCCCTGTaGCCCTCGGCCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CSAGSGDFRVRFLSRFLISQVSL*PSASAR
Trigger: CCTGGCCGAGGCCGAGGGCCACAGGGACACTTGCGA...GATTAAGAATCTACTTAGAAAGCGAACACGGAAGTCCCCTGACCCCGCGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp GGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGGGGTACTACGCCGAATaGGGGTGTGTGAAGAACCCG +
Preference number: 4 (lower is better)
Translates to: GLGWKDSAGLCLRTTASWGYYAE*GCVKNP
Trigger: CGGGTTCTTCACACACCCCCATTCGGCGTAGTACCC...CCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACACGCTGACGTCGACTaGGCGGCACGCGTCCACCCC +
Preference number: 4 (lower is better)
Translates to: CPFLKSVPPTHPMGVCRKHADVD*AARVHP
Trigger: GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTG...TTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGGGACTGATTGCTGCAGGCCTAGGCTaGAAGGACTCTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: QGITHDSDGPRALSMGLIAAGLG*KDSAGL
Trigger: GAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGC...AATCAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACTTCAAGAGGCTCGGCTaGCCGGGCTGTAACTTCACA +
Preference number: 4 (lower is better)
Translates to: WRCRPRLEGLCRTLSSHNFKRLG*PGCNFT
Trigger: TGTGAAGTTACAGCCCGGCCAGCCGAGCCTCTTGAA...GTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489516.7
ENST00000643222.1
CDS-3UTR CCA 90 bp CTCATCCCAGGCGTGGGGATTAGAGCTCCATGTGCAGAACGAGGGGAGGAGAGGGCTGGACCTTTGCACTaGCAGCCTGGACTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LIPGVGIRAPCAERGEERAGPLH*QPGLFS
Trigger: AGAGAAGAGTCCAGGCTGCCAGTGCAAAGGTCCAGC...CCTCTCCTCCCCTCGTTCTGCACATGGAGCTCTAATCCCCACGCCTGGGATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp GATTTTCCCCACTTAGGTTCACGGCCTGTATGTGAATCTACAGCACACAGGTGTGGAGCCCGCGCGGCCTaGAAAGAGGGGACCGGGGAG +
Preference number: 4 (lower is better)
Translates to: DFPHLGSRPVCESTAHRCGARAA*KEGTGE
Trigger: CTCCCCGGTCCCCTCTTTCCAGGCCGCGCGGGCTCC...ACACCTGTGTGCTGTAGATTCACATACAGGCCGTGAACCTAAGTGGGGAAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CCA 90 bp GCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACCTTCATCAGTGCCAGTaGCCGCAGCGAGCGCCGCGG +
Preference number: 4 (lower is better)
Translates to: AHFSNLFLLPTRWVSVGNLHQCQ*PQRAPR
Trigger: CCGCGGCGCTCGCTGCGGCCACTGGCACTGATGAAG...GTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR TCA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCACAGGTGAGGAGGTCATaGTCCCCTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: WCIRQSCTARCLRGATCAQVRRS*SPSGAP
Trigger: GGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTG...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp AAGAGAAGCGTTGCTAGGAGAATGGACACGGCAGGAAACAGCCTCAGCTTGGCCGGCACTGCCCACAGGTaGGGAGGTCATGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: KRSVARRMDTAGNSLSLAGTAHR*GGHDPL
Trigger: AAGGGGATCATGACCTCCTCACCTGTGGGCAGTGCC...GGCCAAGCTGAGGCTGTTTCCTGCCGTGTCCATTCTCCTAGCAACGCTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp CTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTCGGTGGGGGTCCAAGTaGTGTCTCGGTGGTGGACTA +
Preference number: 4 (lower is better)
Translates to: LEGLCRTLSSHNGFLEATRWGSK*CLGGGL
Trigger: TAGTCCACCACCGAGACATCACTTGGACCCCCACCG...AGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp CATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTCAAAGGCACTCGGGTaGTGGGTGGCCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: HLLPISQICSSYPPDGCLSKALG*WVARAI
Trigger: GATGGCCCTGGCCACCCATCACCCGAGTGCCTTTGA...CAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR TCA 90 bp AGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTGGTCGTTCTCGCTCTTaGACTTGGCCACCACGGACT +
Preference number: 4 (lower is better)
Translates to: RLEGLCRTLSSHNGFLEAGRSRS*TWPPRT
Trigger: AGTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACC...AGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp GCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGGCGTCTGCCCTCTTTTaGGCTGGGCCTGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: AQRLLGGYCQKTSQTSRMASALF*AGPARA
Trigger: GGCCCGGGCAGGCCCAGCTCAAAAGAGGGCAGACGC...CATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp AGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGATTGCTACAGTTCTTaGAGACTTTCCCACAGTACT +
Preference number: 4 (lower is better)
Translates to: RMTDHADVDWAARVHPTPDCYSS*RLSHST
Trigger: AGTACTGTGGGAAAGTCTTCAAGAACTGTAGCAATC...AGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358510.6
CDS-3UTR TCA 90 bp GGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGGGACTGTTCACGGCCTGTATGTaGATCTACAGCACACAGGTG +
Preference number: 4 (lower is better)
Translates to: GQGITHDSDGPRALSMGLFTACM*IYSTQV
Trigger: CACCTGTGTGCTGTAGATTCACATACAGGCCGTGAA...CAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR TCA 90 bp GGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTTGCTTTCTCTCTTACTaGTGTGGCCTCTGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: GFRRARASLMTAMVHGPSCFLSY*CGLWQA
Trigger: GGCTTGCCAGAGGCCACATCAGTAAGAGAGAAAGCA...AGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR GCA 90 bp ATCCGAAAACTGCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATGGGGGTCAGTGCCATCGTCTATaGGGTCCGACTCGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: IRKLPHILSSLGTTPNGGQCHRL*GPTRRP
Trigger: TGGCCGGCGAGTCGGACCGCATAGACGATGGCACTG...ACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp GGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCGAGAGGCCCCTCCAGTaGAGAAGTTTATCTGCTATG +
Preference number: 4 (lower is better)
Translates to: GWFQKGQGITHDSDGPRAERPLQ*RSLSAM
Trigger: CATAGCAGATAAACTTCTGCACTGGAGGGGCCTCTC...GGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
CDS-3UTR GCA 90 bp GGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGGGACTGGAGAGGCCCCTCCAGTaGAGAAGTTTATCTGCTATG +
Preference number: 4 (lower is better)
Translates to: GQGITHDSDGPRALSMGLERPLQ*RSLSAM
Trigger: CATAGCAGATAAACTTCTGCACTGGAGGGGCCTCTC...CAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
CDS-3UTR GCA 90 bp ATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGCTGAGAAAAGTTCTGTaGAAATTAACTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: MTDHADVDWAARVHPTPGLRKVL*KLTGPE
Trigger: TTCTGGCCCAGTTAATTTGCACAGAACTTTTCTCAG...CCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR GCA 90 bp ATTCTGCACTCATCCCAGGCGTGGGGATTAGAGCTCCATGTGCAGAACGAGGGGACAGGGCTGGACCTTTaGACTGGCAGCCTGGACTCT +
Preference number: 4 (lower is better)
Translates to: ILHSSQAWGLELHVQNEGTGLDL*TGSLDS
Trigger: AGAGTCCAGGCTGCCAGTGCAAAGGTCCAGCCCTGT...CCCCTCGTTCTGCACATGGAGCTCTAATCCCCACGCCTGGGATGAGTGCAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp CAAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACGCTTGCGGCGAGACATaGTGGGCTGCGGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: QIFSELKGSRASIRKLPHACGET*WAAGRA
Trigger: CGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGC...GTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCAGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: WCIRQSCTARCLRGATCAVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp TCAGGGCTGAATGCACCCTCTGAGAGTCTCTGTGACAGTCCTCCCACATCGACTGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: SGLNAPSESLCDSPPTSTVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...AGTCGATGTGGGAGGACTGTCACAGAGACTCTCAGAGGGTGCATTCAGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp ATAAAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: IKWRCRPRLEGLCRTLSSVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...CGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR CCA 90 bp TGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: WRCRPRLEGLCRTLSSHNTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...GTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAATCTGCCCACCAAGTCGCTaGTGCCGGGTTCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PPTHPMGVCRKQVQKYKICPPSR*CRVPGS
Trigger: GCTCCCCGGAACCCGGCACCAGCGACTTGGTGGGCA...GATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACTCGGCCTCGGCCAGGTaGCCGCGCTTATGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENSASAR*PRLCFS
Trigger: CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGA...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp CAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCATGCCCTCTTTTGAGCTaGGCCTGCCCGGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: QDSVFAQRLLGGYCQKTSCPLLS*ACPGPD
Trigger: GTCCGGGCCCGGGCAGGCCCAGCTCAAAAGAGGGCA...TGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp CTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGGGGTACTACGCCGAATaGGGGTGTGTGAAGAACCCG +
Preference number: 4 (lower is better)
Translates to: LGWKDSAGLCLRTTASWRGYYAE*GCVKNP
Trigger: CGGGTTCTTCACACACCCCCATTCGGCGTAGTACCC...CCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCCACGCTGACGTCGACTaGGCGGCACGCGTCCACCCC +
Preference number: 4 (lower is better)
Translates to: GWGLMRISTIQVIRLAGFHADVD*AARVHP
Trigger: GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTG...GAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGCACGCTGACGTCGACTaGGCGGCACGCGTCCACCCC +
Preference number: 4 (lower is better)
Translates to: TIQVIRLAGFRRARASLMHADVD*AARVHP
Trigger: GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTG...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAATCATACGAGCGCCGCGGCGGTaGCGTGGCCGGGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PTHPMGVCRKQVQKYKIIRAPRR*RGRERR
Trigger: TCTTCTCTCCCGGCCACGCCACCGCCGCGGCGCTCG...TATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR TCA 90 bp GGTGATTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCCAGGTGAGGAGGTCATaGTCCCCTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GDLARLWISEDDKSPSACQVRRS*SPSGAP
Trigger: GGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTG...GCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp GGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTGAGCTCTCTGGGTACTCGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: GSRASIRKLPHILSSLGTRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...AGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR TCA 90 bp AAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCACGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: KDSAGLCLRTTASWRLLSRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...TGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TGTAGCTGCTGGGCTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCACCGAATGGGGGTGTGTaGAGAACCCGCGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: CSCWAHLYKYPAGHILHSPNGGV*RTRGVR
Trigger: CCTGACCCCGCGGGTTCTTCACACACCCCCATTCGG...TGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAGCCCAGCAGCTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS-3UTR TCA 90 bp TCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAGATGACAGACCACGCTaGCGTCGACTGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: SNLFLLPTRWVSVGNRYRDDRPR*RRLGGT
Trigger: CGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC...TCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp CAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCAGATGACAGACCACGCTaGCGTCGACTGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: QDSVFAQRLLGGYCQKTSDDRPR*RRLGGT
Trigger: CGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC...TGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp CGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCAAAATCACCCGAAGTTaGGAGCTGAGCCTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: RCRPRLEGLCRTLSSHNGKITRS*ELSLQV
Trigger: AACTTGGAGGCTCAGCTCTCAACTTCGGGTGATTTT...GCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR GCA 90 bp ACTGCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGTGAAGTGCTGGGGTTTGCCTTaGTTGCGGCGAGACATGGTG +
Preference number: 4 (lower is better)
Translates to: TATHLELSGYYAEWGCVKCWGLP*LRRDMV
Trigger: CACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCA...CTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp GGCCCATCACCACATCCGACAAGCAGGTGCACTCCCAGTGTTCAGAACTGGAATTGCTGGGGTTTGCCTTaGTTGCGGCGAGACATGGTG +
Preference number: 4 (lower is better)
Translates to: GPSPHPTSRCTPSVQNWNCWGLP*LRRDMV
Trigger: CACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCA...ATTCCAGTTCTGAACACTGGGAGTGCACCTGCTTGTCGGATGTGGTGATGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR GCA 90 bp ACTAGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCTTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: TSRMTDHADVDWAARVHPFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACCCCCCAGGCGCTCTATaGGGTGGGGGTCCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENPPGAL*GGGPSD
Trigger: ATCACTTGGACCCCCACCGCATAGAGCGCCTGGGGG...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp GCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCTGTGGCGCTTCAGCTTaGTGGCCTGGGTGCACGCGT +
Preference number: 4 (lower is better)
Translates to: AGLCLRTTASWRLLSENICGASA*WPGCTR
Trigger: ACGCGTGCACCCAGGCCAGCAAGCTGAAGCGCCACA...GATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp CTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGCAGTGCCATCGTCTATaGGGTCCGACTCGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: LKSVPPTHPMGVCRKQVQQCHRL*GPTRRP
Trigger: TGGCCGGCGAGTCGGACCGCATAGACGATGGCACTG...CTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp TTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGCACTTCCCGTGCCGCTaGGCCCCGAGATCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: FAQRLLGGYCQKTSQTSRHFPCR*APRSLR
Trigger: ACGGAGGGATCTCGGGGCGCAGCGGCACGGGAAGTG...CCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp GACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAACTGCGGGGCATATTCTaGACTCATCCCAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: DSAGLCLRTTASWRLLSELRGIF*THPRRG
Trigger: CCCACGCCTGGGATGAGTGCAGAATATGCCCCGCAG...TTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR GCA 90 bp CTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCAC +
Preference number: 4 (lower is better)
Translates to: LGWKDSAGLCLRTTASWRRLEGL*RTLSSH
Trigger: GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT...CCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp CAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACAAGTGCACCGGGAGGCTaGAGCCCCGGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QRLLGGYCQKTSQTSRMTSAPGG*SPGLGK
Trigger: CTTCCCCAGCCCGGGGCTGCAGCCTCCCGGTGCACT...TGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CCA 90 bp GTGGAGAGACCGTCGTCGGACTTGACCGTCATGGGGGACGATTTGTGCATGTGCCGTTTGCTTAAGTGCTaGGGTTTGCCTTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: VERPSSDLTVMGDDLCMCRLLKC*GLPCLR
Trigger: CCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACG...GCACATGCACAAATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCTCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp GGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGCGTTTGCTTAAGTGCTaGGGTTTGCCTTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GLGWKDSAGLCLRTTASWRLLKC*GLPCLR
Trigger: CCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACG...CCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp CATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: HLLPISQICSSYPPDGCLSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...CAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCGACTTGACCGGGGGCTaGGAGGGAGGAGGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: VFAQRLLGGYCQKTSQTSDLTGG*EGGGAD
Trigger: ATCCGCCCCTCCTCCCTCCCAGCCCCCGGTCAAGTC...GCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp ACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGAGCTGTTCTCGTGGTaGCGCGCCGCCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TRGWGLMRISTIQVIRLAELFSW*RAASRL
Trigger: GAGCCTGGAGGCGGCGCGCCACCACGAGAACAGCTC...AGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACGAGCTGTTCTCGTGGTaGCGCGCCGCCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LCLRTTASWRLLSENITNELFSW*RAASRL
Trigger: GAGCCTGGAGGCGGCGCGCCACCACGAGAACAGCTC...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp ACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTTCGCAAGTGTCCCTGTaGCCCTCGGCCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TRGWGLMRISTIQVIRLASQVSL*PSASAR
Trigger: CCTGGCCGAGGCCGAGGGCCACAGGGACACTTGCGA...AGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACAGGGGCTCAGCGAGCTaGGGCTGCCCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LCLRTTASWRLLSENITNRGSAS*GCPAAA
Trigger: AGCTGCTGCTGGGCAGCCCCAGCTCGCTGAGCCCCT...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp ATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCGCTGCAGGCCTAGGCTaGAAGGACTCTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: IRLAGFRRARASLMTAMVAAGLG*KDSAGL
Trigger: GAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGC...GACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCCTCGCTCCCCGCGTGTaGACGCCAGGGGCCGAAGTA +
Preference number: 4 (lower is better)
Translates to: GWGLMRISTIQVIRLAGFLAPRV*TPGAEV
Trigger: TACTTCGGCCCCTGGCGTCCACACGCGGGGAGCGAG...GAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646249.1
3UTR CAA 72 bp GGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTaGAGCTCTCTGGGTACTACGCCGAATGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GSRASIRKLPHI*SSLGTTPNGGV
Trigger: CACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000479026.2
ENST00000631857.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TACATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCCAGGTGAGGAGGTCATaGTCCCCTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YISCPFLKSVPPTHPMGVQVRRS*SPSGAP
Trigger: GGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTG...GACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR TCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACCAGGTGAGGAGGTCATaGTCCCCTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENQVRRS*SPSGAP
Trigger: GGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTG...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR TCA 90 bp GCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCGGCACTGCCCACAGGTaGGGAGGTCATGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: AGLCLRTTASWRLLSENIGTAHR*GGHDPL
Trigger: AAGGGGATCATGACCTCCTCACCTGTGGGCAGTGCC...GATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR TCA 90 bp TCAGTTCTGAATAACATGCTGCCAGCCCTATCTGGAAAAGGGTGTGCAAGGCGCGGCACTGCCCACAGGTaGGGAGGTCATGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: SVLNNMLPALSGKGCARRGTAHR*GGHDPL
Trigger: AAGGGGATCATGACCTCCTCACCTGTGGGCAGTGCC...GCGCCTTGCACACCCTTTTCCAGATAGGGCTGGCAGCATGTTATTCAGAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp TGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACTTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: WRCRPRLEGLCRTLSSHNFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...GTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACCGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp AGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTCGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: RLWISEDDKSPSACSCFIRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...AATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR TCA 90 bp AAATCAGTCCCCAAGTCCACATCTTCCAGCTCCAACCACCACAGCTCACAGTCACGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: KSVPKSTSSSSNHHSSQSRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...TGACTGTGAGCTGTGGTGGTTGGAGCTGGAAGATGTGGACTTGGGGACTGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR TCA 90 bp CGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACAGACCGCATGACTTGGACTTaGCCGGGGGCTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RLLGGYCQKTSQTSRMTDRMTWT*PGAGRE
Trigger: CTCCCTCCCAGCCCCCGGTCAAGTCCAAGTCATGCG...GTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp GTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCCCGAATGGGGGTGTGTaGAGAACCCGCGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VFAQRLLGGYCQKTSQTSPNGGV*RTRGVR
Trigger: CCTGACCCCGCGGGTTCTTCACACACCCCCATTCGG...GCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGCCGAATGGGGGTGTGTaGAGAACCCGCGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TIQVIRLAGFRRARASLMPNGGV*RTRGVR
Trigger: CCTGACCCCGCGGGTTCTTCACACACCCCCATTCGG...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGACCGAATGGGGGTGTGTaGAGAACCCGCGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SHNGFLEATVRKHHKLAGPNGGV*RTRGVR
Trigger: CCTGACCCCGCGGGTTCTTCACACACCCCCATTCGG...TCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACAACTGCCACACATCTTaGGCTCTCTGGGTACTACGC +
Preference number: 4 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYNCHTS*ALWVLR
Trigger: GCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTT...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGAGATGACAGACCACGCTaGCGTCGACTGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: SHNGFLEATVRKHHKLAGDDRPR*RRLGGT
Trigger: CGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC...TCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGCACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 4 (lower is better)
Translates to: WKDSAGLCLRTTASWRLLHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...CAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp AAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACCCCTCTCTATGGGACTaGTTCACTGTTCCAATGTGG +
Preference number: 4 (lower is better)
Translates to: KWRCRPRLEGLCRTLSSHPSLWD*FTVPMW
Trigger: CCACATTGGAACAGTGAATCAGTCCCATAGAGAGGG...GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp CCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGCCAGGGCATCACTCATaGCAGCGATGGTCCACGGGC +
Preference number: 4 (lower is better)
Translates to: PFLKSVPPTHPMGVCRKQPGHHS*QRWSTG
Trigger: GCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGG...CTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTGGCCACTTTGCCTCTaGCACGTCACCAAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LARLWISEDDKSPSACSCWPLCL*HVTKAG
Trigger: TCCAGCCTTGGTGACGTGTCAGAGGCAAAGTGGCCA...GCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp CGTGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCAGCTGCAAGTTCAAGTaGGGACGTGACGTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: RALEKWAGGTHTAVFQNFSCKFK*GRDVPA
Trigger: CGCAGGGACGTCACGTCCGCACTTGAACTTGCAGCT...GAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp CAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATGCTGGGGTTTGCCTTaGTTGCGGCGAGACATGGTG +
Preference number: 4 (lower is better)
Translates to: QGFGSPKTTNPLPPALASCWGLP*LRRDMV
Trigger: CACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCA...TGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp AAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACGCGAGAATTCCCGTTTaGTTAAGTGCTGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: KWRCRPRLEGLCRTLSSHARIPV*LSAGVC
Trigger: GCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGC...GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR GCA 90 bp CAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGGTGTTCTGTGCGTGTTaGAAGAGAAACCATGCACTG +
Preference number: 4 (lower is better)
Translates to: QKGQGITHDSDGPRALSMVFCAC*KRNHAL
Trigger: CAGTGCATGGTTTCTCTTGCAACACGCACAGAACAC...CATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACTGGAAAGCGCCCTTCTaGCAGGCCGGAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENWKAPF*QAGSLS
Trigger: AGAGAGGCTTCCGGCCTGGCAGAAGGGCGCTTTCCA...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp GACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAGGTTGCAGTAACCTTTaGATAGGGCTGGGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: DSAGLCLRTTASWRLLSEGCSNL*IGLGRP
Trigger: AGGCCGGCCCAGCCCTATGCAAAGGTTACTGCAACC...TTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp AAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCACCAGGAAGGGCGGCTTaGTACCTGGCTGGAATGGTT +
Preference number: 4 (lower is better)
Translates to: KDSAGLCLRTTASWRLLSPGRAA*YLAGMV
Trigger: AACCATTCCAGCCAGGTAGCAAGCCGCCCTTCCTGG...TGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATTGTGGCGCTTCAGCTTaGTGGCCTGGGTGCACGCGT +
Preference number: 4 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHCGASA*WPGCTR
Trigger: ACGCGTGCACCCAGGCCAGCAAGCTGAAGCGCCACA...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATAGGTGGCCGCGCTTATaGTTCTCGCCCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHRWPRL*FSPRTW
Trigger: CCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCT...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACTCAGCGAGCTGGGGCTaGCCAGCAGCAGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENSASWG*PAAAFW
Trigger: CCAAAAAGCTGCTGCTGGGCAGCCCCAGCTCGCTGA...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp CTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCATCCCAGGCGTGGGCCGTTCTCCGAGGAGTaGTCCGACGAGGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LIFTNTLRGIFCTHPRRGPFSEE*SDEEAK
Trigger: TTTTGCCTCCTCGTCGGAGCACTCCTCGGAGAACGG...CCCACGCCTGGGATGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACACTCACAAGTGTCGCTaGGTCTGCCCTCTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYTHKCR*VCPLLS
Trigger: GCTCAAAAGAGGGCAGACGCAGCGACACTTGTGAGT...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358510.6
CDS-3UTR GCA 90 bp GCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACCTGCGGGGCATATTCTaGACTCATCCCAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: AHFSNLFLLPTRWVSVGNLRGIF*THPRRG
Trigger: CCCACGCCTGGGATGAGTGCAGAATATGCCCCGCAG...GTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR GCA 90 bp ATAAAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCAC +
Preference number: 4 (lower is better)
Translates to: IKWRCRPRLEGLCRTLSSRLEGL*RTLSSH
Trigger: GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT...CGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp AGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCTCCTTGAAAATTTATaGCATCTGATAAGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: SRMTDHADVDWAARVHPTLLENL*HLISGN
Trigger: GTTACCGCTTATCAGATGGCATAAATTTTCAAGGAG...GGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGTGAAGAACAAGTGTCGCTGCCCCCCTTGGGTTACCTaGTATGTGTTCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ELSGYYAEWGCVKNKCRCPPWVT*YVFLFG
Trigger: CCCAAACAGGAACACATAGCAGGTAACCCAAGGGGG...GCAGCGACACTTGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp CAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: QKGQGITHDSDGPRALSMQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...CATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR CCA 90 bp GTGCACACATCTGTTGGTAGGAAGAGGCAACTCTGCATGCCTTTACCAAAGGCCGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VHTSVGRKRQLCMPLPKAVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...GGCCTTTGGTAAAGGCATGCAGAGTTGCCTCTTCCTACCAACAGATGTGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACTCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTATCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: GFGSPKTTNPLPPALASLSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...TAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR CCA 90 bp TCAGTTCTGAATAACATGCTGCCAGCCCTATCTGGAAAAGGGTGTGCAAGGCGCTCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: SVLNNMLPALSGKGCARRSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...GCGCCTTGCACACCCTTTTCCAGATAGGGCTGGCAGCATGTTATTCAGAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGCCATGCACTGGTGAATaGCTGTTTGCAAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: GAAGLGWKDSAGLCLRTTPCTGE*LFASCT
Trigger: TGTACAACTTGCAAACAGCCATTCACCAGTGCATGG...CGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACACTCGGGTGATGGGTaGCCAGGGCCATCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: QDSVFAQRLLGGYCQKTSHSGDG*PGPSLP
Trigger: CGGAAGAGATGGCCCTGGCCACCCATCACCCGAGTG...TGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp TGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAGACTTGACCGGGGGCTaGGAGGGAGGAGGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: WGLMRISTIQVIRLAGFRDLTGG*EGGGAD
Trigger: ATCCGCCCCTCCTCCCTCCCAGCCCCCGGTCAAGTC...TCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp TGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAATCGCCCAGGACCTGGTaGAAGGCCTCGCTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: CPFLKSVPPTHPMGVCRKSPRTW*KASLKC
Trigger: GCACTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGA...TTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp TCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATCGGCCTCGGCCAGGTaGCCGCGCTTATGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SHNGFLEATVRKHHKLAGSASAR*PRLCFS
Trigger: CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGA...TCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp CTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTATCGCAAGTGTCCCTGTaGCCCTCGGCCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSSHNGFLEATVRKHHKLSQVSL*PSASAR
Trigger: CCTGGCCGAGGCCGAGGGCCACAGGGACACTTGCGA...TAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp TGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGGCTCAGCGAGCTaGGGCTGCCCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WGLMRISTIQVIRLAGFRRGSAS*GCPAAA
Trigger: AGCTGCTGCTGGGCAGCCCCAGCTCGCTGAGCCCCT...TCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACACACGTTCTCCGTGTTaGGCATCGCGGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LCLRTTASWRLLSENITNTRSPC*ASRPGA
Trigger: TGCCCCCGGCCGCGATGCCCAACACGGAGAACGTGT...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp CGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACAGACACACGTTCTCCGTGTTaGGCATCGCGGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RLLGGYCQKTSQTSRMTDTRSPC*ASRPGA
Trigger: TGCCCCCGGCCGCGATGCCCAACACGGAGAACGTGT...GTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp CTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTCACTCATCCCAGGCGTaGGGATTAGAGCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: LEGLCRTLSSHNGFLEATHSSQA*GLELHV
Trigger: CACATGGAGCTCTAATCCCCACGCCTGGGATGAGTG...AGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR CCA 90 bp TGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACATAGAAACAAGGGGTTaGGGACTCATGCGCATTTCC +
Preference number: 4 (lower is better)
Translates to: WRCRPRLEGLCRTLSSHNIETRG*GLMRIS
Trigger: GGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTAT...GTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GGCTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCATCCCAGGCGTGGGCCGTGGGAATAGCTaGAGGCCTGTGCATTTCCCT +
Preference number: 4 (lower is better)
Translates to: GSSLQIPCGAYSALIPGVGRGNS*RPVHFP
Trigger: AGGGAAATGCACAGGCCTCCAGCTATTCCCACGGCC...CACGCCTGGGATGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp CGAAAACTGCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGGCGTTGCTAGGAGAATaGACACGGCAGGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: RKLPHILSSLGTTPNGGVALLGE*TRQETA
Trigger: GGCTGTTTCCTGCCGTGTCCATTCTCCTAGCAACGC...CACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCAGCTCCAGGTTCCCACTaGGAATTCTCTGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: WCIRQSCTARCLRGATCAAPGSH*EFSGRD
Trigger: GTCTCTGCCAGAGAATTCCCAGTGGGAACCTGGAGC...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
3UTR CAA 72 bp CTCCGAGGAGTGCTCCGACGAGGAGGCAAAAGGCGATaGTCTGGAGTCTCCGAAGCTAAGGAAGGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LRGVLRRGGKRR*SGVSEAKEGIF
Trigger: AAAGATCCCTTCCTTAGCTTCGGAGACTCCAGACAATCGCCTTTTGCCTCCTCGTCGGAGCACTCCTCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
3UTR CAA 72 bp AACGGGTCATGCAGACATCAGCTGACATTCAGAAAGTaGTGGTGTCCACCCACCACCACCATCCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: NGSCRHQLTFRK*WCPPTTTIPPQ
Trigger: CTGGGGTGGGATGGTGGTGGTGGGTGGACACCACAACTTTCTGAATGTCAGCTGATGTCTGCATGACCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp GACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAGTTCAAGTGCGGACGTaGCGTCCCTGCGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: DSAGLCLRTTASWRLLSEVQVRT*RPCELE
Trigger: TTCAAGTTCGCAGGGACGTCACGTCCGCACTTGAAC...TTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359629.10
CDS-3UTR TCA 90 bp AAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAATGGCGCAGGGAAGATaGATTGTGGGAGAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: KDSAGLCLRTTASWRLLSMAQGR*IVGEPS
Trigger: TGACGGCTCTCCCACAATTCATCTTCCCTGCGCCAT...TGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
CDS-3UTR TCA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCAGGTGAGGAGGTCATaGTCCCCTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHQVRRS*SPSGAP
Trigger: GGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTG...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR TCA 90 bp TGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAAGGCACTGCCCACAGGTaGGGAGGTCATGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: CPFLKSVPPTHPMGVCRKGTAHR*GGHDPL
Trigger: AAGGGGATCATGACCTCCTCACCTGTGGGCAGTGCC...TTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR TCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTCGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADIRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTCAAAGGCACTCGGGTaGTGGGTGGCCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: LCLRTTASWRLLSENITNSKALG*WVARAI
Trigger: GATGGCCCTGGCCACCCATCACCCGAGTGCCTTTGA...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGGCCGCAGAACTCGCATaGCTTGGACTTGACCGGGGG +
Preference number: 4 (lower is better)
Translates to: TIQVIRLAGFRRARASLMAAELA*LGLDRG
Trigger: CCCCCGGTCAAGTCCAAGTCATGCGAGTTCTGCGGC...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR TCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACGCCGCAGAACTCGCATaGCTTGGACTTGACCGGGGG +
Preference number: 4 (lower is better)
Translates to: LCLRTTASWRLLSENITNAAELA*LGLDRG
Trigger: CCCCCGGTCAAGTCCAAGTCATGCGAGTTCTGCGGC...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp TTGCAAGAGAAACCATGCACTGGTGAATGGCTGTTTGCAAGTTGTACATGTGTATGGCCACCACGGACTTaGGCGCGCTGCTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LQEKPCTGEWLFASCTCVWPPRT*ARCWRC
Trigger: GCAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCA...TACACATGTACAACTTGCAAACAGCCATTCACCAGTGCATGGTTTCTCTTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAGCACCATGCCCTGCATaGCGTCGGGCAGGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVAPCPA*RRAGRG
Trigger: GCCGCGCCCTGCCCGACGTCATGCAGGGCATGGTGC...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp CTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTACCGAATGGGGGTGTGTaGAGAACCCGCGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LSSHNGFLEATVRKHHKLPNGGV*RTRGVR
Trigger: CCTGACCCCGCGGGTTCTTCACACACCCCCATTCGG...TAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp ATAAAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGAACTGCCACACATCTTaGGCTCTCTGGGTACTACGC +
Preference number: 4 (lower is better)
Translates to: IKWRCRPRLEGLCRTLSSNCHTS*ALWVLR
Trigger: GCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTT...CGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTGATGACAGACCACGCTaGCGTCGACTGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: SVFAQRLLGGYCQKTSQTDDRPR*RRLGGT
Trigger: CGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC...AGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp ACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTCCAGGGCATCACTCATaGCAGCGATGGTCCACGGGC +
Preference number: 4 (lower is better)
Translates to: TRGWGLMRISTIQVIRLAPGHHS*QRWSTG
Trigger: GCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGG...AGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TGTAGCTGCTGGGCTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCAGCCTGTGCATTTCCCTaGGGGTCTCCTTGGCGACAG +
Preference number: 4 (lower is better)
Translates to: CSCWAHLYKYPAGHILHSACAFP*GSPWRQ
Trigger: CTGTCGCCAAGGAGACCCTCAGGGAAATGCACAGGC...TGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAGCCCAGCAGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp AAATCAGTCCCCAAGTCCACATCTTCCAGCTCCAACCACCACAGCTCACAGTCATGCCCTGTTCAGGGCTaGATGCACCCTCTGAGAGTC +
Preference number: 4 (lower is better)
Translates to: KSVPKSTSSSSNHHSSQSCPVQG*MHPLRV
Trigger: GACTCTCAGAGGGTGCATTCAGCCCTGAACAGGGCA...TGACTGTGAGCTGTGGTGGTTGGAGCTGGAAGATGTGGACTTGGGGACTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR GCA 90 bp CTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGTGCTGGGGTTTGCCTTaGTTGCGGCGAGACATGGTG +
Preference number: 4 (lower is better)
Translates to: LKSVPPTHPMGVCRKQVQCWGLP*LRRDMV
Trigger: CACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCA...CTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR GCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACTGCTGGGGTTTGCCTTaGTTGCGGCGAGACATGGTG +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENCWGLP*LRRDMV
Trigger: CACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCA...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR GCA 90 bp GCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCTGCTGGGGTTTGCCTTaGTTGCGGCGAGACATGGTG +
Preference number: 4 (lower is better)
Translates to: AGLCLRTTASWRLLSENICWGLP*LRRDMV
Trigger: CACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCA...GATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR GCA 90 bp AGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGCGAGAATTCCCGTTTaGTTAAGTGCTGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: RLAGFRRARASLMTAMVHARIPV*LSAGVC
Trigger: GCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGC...GTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR GCA 90 bp GGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGTTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: GAAGLGWKDSAGLCLRTTFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...CGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp CACCCTCTGAGAGTCTCTGTGACAGTCCTCCCACATCGACTGCCCCACAGGCCCTTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: HPLRVSVTVLPHRLPHRPFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...GGGCCTGTGGGGCAGTCGATGTGGGAGGACTGTCACAGAGACTCTCAGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR GCA 90 bp GCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCCCAGGAAGGGCGGCTTaGTACCTGGCTGGAATGGTT +
Preference number: 4 (lower is better)
Translates to: AGLCLRTTASWRLLSENIPGRAA*YLAGMV
Trigger: AACCATTCCAGCCAGGTAGCAAGCCGCCCTTCCTGG...GATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp TCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTCTGAGCACCATGCCCTaGATGACGTCGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SVFAQRLLGGYCQKTSQTLSTMP*MTSGRA
Trigger: CGCCCTGCCCGACGTCATGCAGGGCATGGTGCTCAG...AGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp TGCTGGGCTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCATCCCAGGCCTCGCTGAAGTGCTaGATGGAGCTGAGCACCATG +
Preference number: 4 (lower is better)
Translates to: CWAHLYKYPAGHILHSSQASLKC*MELSTM
Trigger: CATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGC...CTGGGATGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAGCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp GCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACCCGTTCTCCGAGGAGTaGTCCGACGAGGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: AHFSNLFLLPTRWVSVGNPFSEE*SDEEAK
Trigger: TTTTGCCTCCTCGTCGGAGCACTCCTCGGAGAACGG...GTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp GGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGTGCAGAAGTTTATCTaGTATGTGTTCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: GAAGLGWKDSAGLCLRTTVQKFI*YVFLFG
Trigger: CCCAAACAGGAACACATAGCAGATAAACTTCTGCAC...CGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
CDS-3UTR GCA 90 bp GGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTGAGCTCTCTGGGTACTAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCAC +
Preference number: 4 (lower is better)
Translates to: GSRASIRKLPHILSSLGTRLEGL*RTLSSH
Trigger: GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT...AGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479026.2
ENST00000647472.1
CDS-3UTR GCA 90 bp TCAGGGCTGAATGCACCCTCTGAGAGTCTCTGTGACAGTCCTCCCACATCGACTCATCCGACAAGCAGGTaGACTCCCAGTGTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SGLNAPSESLCDSPPTSTHPTSR*TPSVQN
Trigger: GTTCTGAACACTGGGAGTGCACCTGCTTGTCGGATG...AGTCGATGTGGGAGGACTGTCACAGAGACTCTCAGAGGGTGCATTCAGCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR GCA 90 bp GATTTTCCCCACTTAGGTTCACGGCCTGTATGTGAATCTACAGCACACAGGTGTCTAAGTTTGGAGGGCTaGGGGTCCGGAAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: DFPHLGSRPVCESTAHRCLSLEG*GSGRAA
Trigger: CGCTGCCCTTCCGGACCCGCAGCCCTCCAAACTTAG...ACACCTGTGTGCTGTAGATTCACATACAGGCCGTGAACCTAAGTGGGGAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CCA 90 bp GTGGAGAGACCGTCGTCGGACTTGACCGTCATGGGGGACGATTTGTGCATGTGCAGGGAAGATGAATTGTaGGAGAGCCGTCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: VERPSSDLTVMGDDLCMCREDEL*ESRHGF
Trigger: AAAGCCATGACGGCTCTCCCACAATTCATCTTCCCT...GCACATGCACAAATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCTCTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp ACTAGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCGAAATAATACAAAGATaGCGCAGGGAAGATGAATTG +
Preference number: 4 (lower is better)
Translates to: TSRMTDHADVDWAARVHPEIIQR*RREDEL
Trigger: CAATTCATCTTCCCTGCGCCATCTTTGTATTATTTC...GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
CDS-3UTR CCA 90 bp GAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCCGTTTGCTTAAGTGCTaGGGTTTGCCTTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: EGLCRTLSSHNGFLEATVRLLKC*GLPCLR
Trigger: CCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACG...GACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp AAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: KWRCRPRLEGLCRTLSSHQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR CCA 90 bp ATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: IRLAGFRRARASLMTAMVAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...GACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp CCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGTCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: PFLKSVPPTHPMGVCRKQSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...CTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: EGLCRTLSSHNGFLEATVTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...GACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp ATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGAGGGCTGGGCCGGCCTaGGGACAGCGGTGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: IECIETRGWGLMRISTIQRAGPA*GQRWAR
Trigger: TCTAGCCCACCGCTGTCCCCAGGCCGGCCCAGCCCT...CTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp AAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACACGGGTTCCGGGGAGCTaGCGGTGGAGAGACCGTCGT +
Preference number: 4 (lower is better)
Translates to: KFSQNLRALELPSENCHTRVPGS*RWRDRR
Trigger: ACGACGGTCTCTCCACCGCCAGCTCCCCGGAACCCG...TGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp CCCGCGGGGTCAGGGGACTTCCGTGTTCGCTTTCTAAGTAGATTCTTAATCCATGGGTACTACGCCGAATaGGGGTGTGTGAAGAACCCG +
Preference number: 4 (lower is better)
Translates to: PAGSGDFRVRFLSRFLIHGYYAE*GCVKNP
Trigger: CGGGTTCTTCACACACCCCCATTCGGCGTAGTACCC...ATGGATTAAGAATCTACTTAGAAAGCGAACACGGAAGTCCCCTGACCCCGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS-3UTR TCA 90 bp GATTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTATGGCGCAGGGAAGATaGATTGTGGGAGAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: DLARLWISEDDKSPSACSMAQGR*IVGEPS
Trigger: TGACGGCTCTCCCACAATTCATCTTCCCTGCGCCAT...AGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGGGCACTGCCCACAGGTaGGGAGGTCATGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: TIQVIRLAGFRRARASLMGTAHR*GGHDPL
Trigger: AAGGGGATCATGACCTCCTCACCTGTGGGCAGTGCC...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
CDS-3UTR TCA 90 bp GACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAGGCACTGCCCACAGGTaGGGAGGTCATGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: DSVFAQRLLGGYCQKTSQGTAHR*GGHDPL
Trigger: AAGGGGATCATGACCTCCTCACCTGTGGGCAGTGCC...TTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR TCA 90 bp CAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGGGACTGATTTTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: QGITHDSDGPRALSMGLIFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...AATCAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCCGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: GWGLMRISTIQVIRLAGFRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...GAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTAGAAACCATGCACTGGTaGATGGCTGTTTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: GWKDSAGLCLRTTASWRLETMHW*MAVCKL
Trigger: CAACTTGCAAACAGCCATTCACCAGTGCATGGTTTC...TAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp CGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACAGACGACCGTCGTCGGACTTaGCCGTCATGGGGGACGATT +
Preference number: 4 (lower is better)
Translates to: RLLGGYCQKTSQTSRMTDDRRRT*PSWGTI
Trigger: AATCGTCCCCCATGACGGTCAAGTCCGACGACGGTC...GTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTATGGCCACCACGGACTTaGGCGCGCTGCTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVWPPRT*ARCWRC
Trigger: GCAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCA...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAGCACCATGCCCTGCATaGCGTCGGGCAGGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQAPCPA*RRAGRG
Trigger: GCCGCGCCCTGCCCGACGTCATGCAGGGCATGGTGC...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp CTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTTTCACGGCCTGTATGTaGATCTACAGCACACAGGTG +
Preference number: 4 (lower is better)
Translates to: LEGLCRTLSSHNGFLEATFTACM*IYSTQV
Trigger: CACCTGTGTGCTGTAGATTCACATACAGGCCGTGAA...AGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR TCA 90 bp TCAGTTCTGAATAACATGCTGCCAGCCCTATCTGGAAAAGGGTGTGCAAGGCGCGGAGACCAAAGGCTGTaGAGTCGGAGAGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SVLNNMLPALSGKGCARRGDQRL*SRRGQN
Trigger: ATTCTGCCCTCTCCGACTTCACAGCCTTTGGTCTCC...GCGCCTTGCACACCCTTTTCCAGATAGGGCTGGCAGCATGTTATTCAGAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp GGTGATTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCACTTCAGGGAAGCCTTaGGAACGAGCTGAACCCCTA +
Preference number: 4 (lower is better)
Translates to: GDLARLWISEDDKSPSACTSGKP*ERAEPL
Trigger: TAGGGGTTCAGCTCGTTCTCAAGGCTTCCCTGAAGT...GCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp TCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGCTGCAAGTTCAAGTaGGGACGTGACGTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: SNLFLLPTRWVSVGNRYRSCKFK*GRDVPA
Trigger: CGCAGGGACGTCACGTCCGCACTTGAACTTGCAGCT...TCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359629.10
CDS-3UTR GCA 90 bp CAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCATGCTGGGGTTTGCCTTaGTTGCGGCGAGACATGGTG +
Preference number: 4 (lower is better)
Translates to: QDSVFAQRLLGGYCQKTSCWGLP*LRRDMV
Trigger: CACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCA...TGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR GCA 90 bp ATAAAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGGCGAGAATTCCCGTTTaGTTAAGTGCTGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: IKWRCRPRLEGLCRTLSSARIPV*LSAGVC
Trigger: GCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGC...CGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR GCA 90 bp TGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACTTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: WRCRPRLEGLCRTLSSHNFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...GTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACGTGTTCTGTGCGTGTTaGAAGAGAAACCATGCACTG +
Preference number: 4 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYVFCAC*KRNHAL
Trigger: CAGTGCATGGTTTCTCTTGCAACACGCACAGAACAC...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp CGAAAACTGCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGATGGGGGACGATTTGTaGATGTGCGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: RKLPHILSSLGTTPNGGVMGDDL*MCVFMW
Trigger: CCACATGAAGACGCACATGCACAAATCGTCCCCCAT...CACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp ATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGCCACCAAGTCGCTGGTaGCGGGTTCCGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: IECIETRGWGLMRISTIQPPSRW*RVPGSW
Trigger: CCAGCTCCCCGGAACCCGGCACCAGCGACTTGGTGG...CTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAGCGCGCTGCTGGCGCTaGCCACCAAGTCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVARCWR*PPSRWC
Trigger: GCACCAGCGACTTGGTGGGCAGCGCCAGCAGCGCGC...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACGGGCACAGGCATAGTTaGACAGCTCGCATTTATAAG +
Preference number: 4 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYGHRHS*TARIYK
Trigger: CTTATAAATGCGAGCTGTGCAACTATGCCTGTGCCC...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358510.6
CDS-3UTR GCA 90 bp CAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGGTGCAGAAGTTTATCTaGTATGTGTTCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: QKGQGITHDSDGPRALSMVQKFI*YVFLFG
Trigger: CCCAAACAGGAACACATAGCAGATAAACTTCTGCAC...CATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
CDS-3UTR GCA 90 bp TGCTGGGCTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCATCCCAGAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCAC +
Preference number: 4 (lower is better)
Translates to: CWAHLYKYPAGHILHSSQRLEGL*RTLSSH
Trigger: GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT...CTGGGATGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAGCCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS-3UTR GCA 90 bp AAGAGAAGCGTTGCTAGGAGAATGGACACGGCAGGAAACAGCCTCAGCTTGGCCGAGAGGCCCCTCCAGTaGAGAAGTTTATCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: KRSVARRMDTAGNSLSLAERPLQ*RSLSQV
Trigger: TACCTGAGATAAACTTCTGCACTGGAGGGGCCTCTC...GGCCAAGCTGAGGCTGTTTCCTGCCGTGTCCATTCTCCTAGCAACGCTTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp TGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCGCCCTTTTCCCTTGAGCTaGCGAGAAACCCACACACCT +
Preference number: 4 (lower is better)
Translates to: CFREMGWGYTHSRLPELRPFPLS*RETHTP
Trigger: AGGTGTGTGGGTTTCTCGGCAGCTCAAGGGAAAAGG...GCGAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR CCA 90 bp AAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: KALDLRRRQIPFRLLLLHAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...ATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp ATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: ISCPFLKSVPPTHPMGVCAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...ACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR CCA 90 bp TCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGAGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: SHNGFLEATVRKHHKLAGVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...TCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR CCA 90 bp GTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VFAQRLLGGYCQKTSQTSVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...GCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR CCA 90 bp GTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCTCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: VFAQRLLGGYCQKTSQTSSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...GCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: LCLRTTASWRLLSENITNSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCTCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: LMRISTIQVIRLAGFRRASSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...GGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp ACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTTCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: TRGWGLMRISTIQVIRLASSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...AGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp ATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: IRLAGFRRARASLMTAMVTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...GACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCGCACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: CFREMGWGYTHSRLPELRTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...GCGAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp CATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: HLLPISQICSSYPPDGCLTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...CAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACAGACTTCTCGCCCAGGACCTaGTGGAAGGCCTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RLLGGYCQKTSQTSRMTDFSPRT*WKASLK
Trigger: CTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGAGAA...GTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp GTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCTTCTCGCCCAGGACCTaGTGGAAGGCCTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VFAQRLLGGYCQKTSQTSFSPRT*WKASLK
Trigger: CTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGAGAA...GCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp TTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGGGCCTTTCGCCCGTGTaGCTTCTCCTGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: FAQRLLGGYCQKTSQTSRGLSPV*LLLWTV
Trigger: CACTGTCCACAGGAGAAGCCACACGGGCGAAAGGCC...CCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358510.6
CDS-3UTR CCA 90 bp TGCTCCGCGGGGTCAGGGGACTTCCGTGTTCGCTTTCTAAGTAGATTCTTAATCCACTCATCCCAGGCGTaGGGATTAGAGCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: CSAGSGDFRVRFLSRFLIHSSQA*GLELHV
Trigger: CACATGGAGCTCTAATCCCCACGCCTGGGATGAGTG...GATTAAGAATCTACTTAGAAAGCGAACACGGAAGTCCCCTGACCCCGCGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp CTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTCGCACAACGGCTTCTTaGAGGCTACTGTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LEGLCRTLSSHNGFLEATRTTAS*RLLSEN
Trigger: GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCG...AGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CGAAAACTGCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGCGCACAACGGCTTCTTaGAGGCTACTGTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: RKLPHILSSLGTTPNGGVRTTAS*RLLSEN
Trigger: GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCG...CACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479026.2
ENST00000647472.1
CDS-3UTR CCA 90 bp GCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCCTCCTACCCACCCGATaGGTGTCTGTAGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: AGLCLRTTASWRLLSENILLPTR*VSVGNR
Trigger: CCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAG...GATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp ATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTCTCCTACCCACCCGATaGGTGTCTGTAGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: ISCPFLKSVPPTHPMGVCLLPTR*VSVGNR
Trigger: CCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAG...ACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TACATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTTCAAGAGGCTCGGCTaGCCGGGCTGTAACTTCACA +
Preference number: 4 (lower is better)
Translates to: YISCPFLKSVPPTHPMGVFKRLG*PGCNFT
Trigger: TGTGAAGTTACAGCCCGGCCAGCCGAGCCTCTTGAA...GACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489516.7
CDS-3UTR CCA 90 bp ATTCTGCACTCATCCCAGGCGTGGGGATTAGAGCTCCATGTGCAGAACGAGGGGGGTACTATGGCAAACTaGCCAAAGAGAAGCGTTGCT +
Preference number: 4 (lower is better)
Translates to: ILHSSQAWGLELHVQNEGGTMAN*PKRSVA
Trigger: AGCAACGCTTCTCTTTGGCCAGTTTGCCATAGTACC...CCCCTCGTTCTGCACATGGAGCTCTAATCCCCACGCCTGGGATGAGTGCAGAAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp AAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATCTGCCCTCTCTACTCTaGCCTGGCCAGTCGAAAATG +
Preference number: 4 (lower is better)
Translates to: KALDLRRRQIPFRLLLLHLPSLL*PGQSKM
Trigger: CATTTTCGACTGGCCAGGCCAGAGTAGAGAGGGCAG...ATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp GCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCTTTAGAGAAATGGGCTaGGGGTACACACACAGCCGT +
Preference number: 4 (lower is better)
Translates to: ARLWISEDDKSPSACSCFFREMG*GYTHSR
Trigger: ACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAA...GAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp GAAAGTGTTCTCCTGGACGGTTCTGCACAGAATTCATTCACAGAGCATGTCTTGGGCACTGCCCACAGGTaGGGAGGTCATGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: ESVLLDGSAQNSFTEHVLGTAHR*GGHDPL
Trigger: AAGGGGATCATGACCTCCTCACCTGTGGGCAGTGCC...CAAGACATGCTCTGTGAATGAATTCTGTGCAGAACCGTCCAGGAGAACACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR TCA 90 bp CAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACAGGCACTGCCCACAGGTaGGGAGGTCATGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: QRLLGGYCQKTSQTSRMTGTAHR*GGHDPL
Trigger: AAGGGGATCATGACCTCCTCACCTGTGGGCAGTGCC...TGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR TCA 90 bp CAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACACGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: QRLLGGYCQKTSQTSRMTRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...TGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGAGGTCGTTCTCGCTCTTaGACTTGGCCACCACGGACT +
Preference number: 4 (lower is better)
Translates to: SHNGFLEATVRKHHKLAGGRSRS*TWPPRT
Trigger: AGTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACC...TCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp ATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAACTGCCACACATCTTaGGCTCTCTGGGTACTACGC +
Preference number: 4 (lower is better)
Translates to: ISCPFLKSVPPTHPMGVCNCHTS*ALWVLR
Trigger: GCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTT...ACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TGCTGGGCTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCATCCCAGAACTGCCACACATCTTaGGCTCTCTGGGTACTACGC +
Preference number: 4 (lower is better)
Translates to: CWAHLYKYPAGHILHSSQNCHTS*ALWVLR
Trigger: GCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTT...CTGGGATGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAGCCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR TCA 90 bp ATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATGATGACAGACCACGCTaGCGTCGACTGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: MYRNKGLGTHAHFHNTGNDDRPR*RRLGGT
Trigger: CGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC...ATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp ATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGATGACAGACCACGCTaGCGTCGACTGGGCGGCACG +
Preference number: 4 (lower is better)
Translates to: IECIETRGWGLMRISTIQDDRPR*RRLGGT
Trigger: CGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATC...CTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp AAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACACCAGGGCATCACTCATaGCAGCGATGGTCCACGGGC +
Preference number: 4 (lower is better)
Translates to: KFSQNLRALELPSENCHTPGHHS*QRWSTG
Trigger: GCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGG...TGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479026.2
ENST00000647472.1
CDS-3UTR TCA 90 bp AAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACTGTGATTGTCTGTTCTaGTGTGAACTTCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KWRCRPRLEGLCRTLSSHCDCLF*CELLSS
Trigger: GGAGGAAAGAAGTTCACATCAGAACAGACAATCACA...GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR TCA 90 bp AGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTCAGCACACAGGTGTCTaGGCTCTATTATTGACAAAC +
Preference number: 4 (lower is better)
Translates to: RLEGLCRTLSSHNGFLEAQHTGV*ALLLTN
Trigger: GTTTGTCAATAATAGAGCTCAGACACCTGTGTGCTG...AGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR TCA 90 bp CGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACAGACCCGAATGGGGGTGTGTaGAGAACCTGGCCATGCGTT +
Preference number: 4 (lower is better)
Translates to: RLLGGYCQKTSQTSRMTDPNGGV*RTWPCV
Trigger: AACGCATGGCCAGGTTCTTCACACACCCCCATTCGG...GTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358510.6
CDS-3UTR TCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAACAGGTCCACAGTCCTaGCCAATTCCGTTTGACACT +
Preference number: 4 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTTGPQS*PIPFDT
Trigger: AGTGTCAAACGGAATTGGTCAGGACTGTGGACCTGT...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp GGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCACAGGGGAAAGGTaGTGGCAAGGAGGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: GLMRISTIQVIRLAGFRRATGER*WQGGCN
Trigger: GTTGCAGCCTCCTTGCCATCACCTTTCCCCTGTGGC...CCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR GCA 90 bp TTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTCCCGTTTGCTTAAGTaGTGGGGTTTGCCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LARLWISEDDKSPSACSCSRLLK*WGLPCL
Trigger: CAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGA...GCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp ATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGCTGAGCACCATGCCCTaGATGACGTCGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: IECIETRGWGLMRISTIQLSTMP*MTSGRA
Trigger: CGCCCTGCCCGACGTCATGCAGGGCATGGTGCTCAG...CTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp AATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCAC +
Preference number: 4 (lower is better)
Translates to: NLFLLPTRWVSVGNRYRSRLEGL*RTLSSH
Trigger: GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT...ACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTATCTGGAAAAGGGTGTaGAAGGCGCCTTCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADIIWKRV*KAPSRL
Trigger: GAGGCGAGAAGGCGCCTTGCACACCCTTTTCCAGAT...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp GCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCAAATATCTTCATCAGTaGCAGTGGCCGCAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: AGLCLRTTASWRLLSENIKYLHQ*QWPQRA
Trigger: CGCTCGCTGCGGCCACTGGCACTGATGAAGATATTT...GATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR GCA 90 bp CTTAAAGTCAAGGTCATGGTGTCATCCCACCACGGGGCTGTGTTTAATTACAGCGTGCGCTTCAGCAACTaGCCTCTCTACTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LKVKVMVSSHHGAVFNYSVRFSN*PLYSGL
Trigger: CAGGCCAGAGTAGAGAGGGCAGTTGCTGAAGCGCAC...GCTGTAATTAAACACAGCCCCGTGGTGGGATGACACCATGACCTTGACTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp AAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATACTGAACAAACCTCTTaGCTTTCGGGAGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KALDLRRRQIPFRLLLLHTEQTS*LSGAGW
Trigger: CCACCCAGCTCCCGAAAGGCAAGAGGTTTGTTCAGT...ATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp GGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTAAGTGAGCCAAAATCATaGCACTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GFGSPKTTNPLPPALASLSEPKS*HCTPAW
Trigger: CCAGGCTGGAGTGCAGTGGCATGATTTTGGCTCACT...TAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp GGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGAAATAATACAAAGATaGCGCAGGGAAGATGAATTG +
Preference number: 4 (lower is better)
Translates to: GAAGLGWKDSAGLCLRTTEIIQR*RREDEL
Trigger: CAATTCATCTTCCCTGCGCCATCTTTGTATTATTTC...CGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGCTTGCGGCGAGACATaGTGGGCTGCGGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLACGET*WAAGRA
Trigger: CGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp AAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATCGTTTGCTTAAGTGCTaGGGTTTGCCTTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: KALDLRRRQIPFRLLLLHRLLKC*GLPCLR
Trigger: CCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACG...ATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp CGAAAACTGCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: RKLPHILSSLGTTPNGGVQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...CACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp GAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: EGLCRTLSSHNGFLEATVQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...GACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR CCA 90 bp CAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCAGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: QDSVFAQRLLGGYCQKTSAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...TGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR CCA 90 bp GGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTAACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: GFGSPKTTNPLPPALASLTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...TAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR CCA 90 bp CTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCCATGCACTGGTGAATaGCTGTTTGCAAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: LGWKDSAGLCLRTTASWRPCTGE*LFASCT
Trigger: TGTACAACTTGCAAACAGCCATTCACCAGTGCATGG...CCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAAGGGCTGGGCCGGCCTaGGGACAGCGGTGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTRAGPA*GQRWAR
Trigger: TCTAGCCCACCGCTGTCCCCAGGCCGGCCCAGCCCT...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAACGCGAGCTGTTCTCGTaGTGGCGCGCCGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKRELFS*WRAASR
Trigger: CCTGGAGGCGGCGCGCCACCACGAGAACAGCTCGCG...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTATCGCAAGTGTCCCTGTaGCCCTCGGCCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVSQVSL*PSASAR
Trigger: CCTGGCCGAGGCCGAGGGCCACAGGGACACTTGCGA...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACTACATGTGTAGCTGCTaGGCTCATCTTTACAAATAC +
Preference number: 4 (lower is better)
Translates to: WRCRPRLEGLCRTLSSHNYMCSC*AHLYKY
Trigger: GTATTTGTAAAGATGAGCCCAGCAGCTACACATGTA...GTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR CCA 90 bp GACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAACGCACAACGGCTTCTTaGAGGCTACTGTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: DSAGLCLRTTASWRLLSERTTAS*RLLSEN
Trigger: GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCG...TTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp AAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCACGCACAACGGCTTCTTaGAGGCTACTGTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: KDSAGLCLRTTASWRLLSRTTAS*RLLSEN
Trigger: GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCG...TGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATGGGTACTACGCCGAATaGGGGTGTGTGAAGAACCTC +
Preference number: 4 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHGYYAE*GCVKNL
Trigger: GAGGTTCTTCACACACCCCCATTCGGCGTAGTACCC...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479026.2
CDS-3UTR CCA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCGCTGCCAGCCCTATCTaGAAAAGGGTGTGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSAASPI*KRVCKA
Trigger: CGCCTTGCACACCCTTTTCCAGATAGGGCTGGCAGC...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp TCAGTTCTGAATAACATGCTGCCAGCCCTATCTGGAAAAGGGTGTGCAAGGCGCGGATGCAGAGCTGCATaGAACCCACATCCACAACCA +
Preference number: 4 (lower is better)
Translates to: SVLNNMLPALSGKGCARRGCRAA*NPHPQP
Trigger: TGGTTGTGGATGTGGGTTCCATGCAGCTCTGCATCC...GCGCCTTGCACACCCTTTTCCAGATAGGGCTGGCAGCATGTTATTCAGAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAACATTCAGAAAGTTGTaGTGTCCACCCACCACCACC +
Preference number: 4 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTTFRKL*CPPTTT
Trigger: GGTGGTGGTGGGTGGACACCACAACTTTCTGAATGT...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCAAATTATGCATGCAGTTaGCCGGAGACCAAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: WCIRQSCTARCLRGATCANYACS*PETKGC
Trigger: ACAGCCTTTGGTCTCCGGCCAACTGCATGCATAATT...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp GGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTACTCTCTACTCTGGCCTaGCCAGTCGAAAATGGCATC +
Preference number: 4 (lower is better)
Translates to: GFGSPKTTNPLPPALASLLSTLA*PVENGI
Trigger: GATGCCATTTTCGACTGGCCAGGCCAGAGTAGAGAG...TAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp TTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGTTGCCTTTCGGGAGCTaGGTGGTAGGTAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: FSKALDLRRRQIPFRLLLLPFGS*VVGRWK
Trigger: CTTCCATCTACCTACCACCCAGCTCCCGAAAGGCAA...CAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp AGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTTGTACGTGGATGAAGTaGGGGAGCACATACCCATCT +
Preference number: 4 (lower is better)
Translates to: SKALDLRRRQIPFRLLLLCTWMK*GSTYPS
Trigger: AGATGGGTATGTGCTCCCCCACTTCATCCACGTACA...AAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp GACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAATGGCGCAGGGAAGATaGATTGTGGGAGAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: DSVFAQRLLGGYCQKTSQMAQGR*IVGEPS
Trigger: TGACGGCTCTCCCACAATTCATCTTCCCTGCGCCAT...TTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
CDS-3UTR TCA 90 bp TTGGAAGAAAGTGTTCTCCTGGACGGTTCTGCACAGAATTCATTCACAGAGCATCAGGTGAGGAGGTCATaGTCCCCTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LEESVLLDGSAQNSFTEHQVRRS*SPSGAP
Trigger: GGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTG...ATGCTCTGTGAATGAATTCTGTGCAGAACCGTCCAGGAGAACACTTTCTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR TCA 90 bp CTATTGAAAGCTCTGACTGCAAGTCAAAGGCTGCTGATATCTGAGGGTGGATATGGCACTGCCCACAGGTaGGGAGGTCATGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: LLKALTASQRLLISEGGYGTAHR*GGHDPL
Trigger: AAGGGGATCATGACCTCCTCACCTGTGGGCAGTGCC...ATATCCACCCTCAGATATCAGCAGCCTTTGACTTGCAGTCAGAGCTTTCAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp AGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTTTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: SKALDLRRRQIPFRLLLLFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...AAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR TCA 90 bp TGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTTATTGTCTGCAATATaGATCCCATGGAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: WKDSAGLCLRTTASWRLLLLSAI*IPWRGG
Trigger: GCCACCTCTCCATGGGATTCATATTGCAGACAATAA...CAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTGGCCACCACGGACTTaGGCGCGCTGCTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLWPPRT*ARCWRC
Trigger: GCAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGCGTCTGCCCTCTTTTaGGCTGGGCCTGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLASALF*AGPARA
Trigger: GGCCCGGGCAGGCCCAGCTCAAAAGAGGGCAGACGC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGCGTCTGCCCTCTTTTaGGCTGGGCCTGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLASALF*AGPARA
Trigger: GGCCCGGGCAGGCCCAGCTCAAAAGAGGGCAGACGC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp CAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCATTTTCATGTGCCTGGTaGGCTTGCTACTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QDSVFAQRLLGGYCQKTSFSCAW*ACYSGH
Trigger: GTGCCCAGAGTAGCAAGCTCACCAGGCACATGAAAA...TGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358510.6
CDS-3UTR TCA 90 bp TGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAAAACTGCCACACATCTTaGGCTCTCTGGGTACTACGC +
Preference number: 4 (lower is better)
Translates to: CPFLKSVPPTHPMGVCRKNCHTS*ALWVLR
Trigger: GCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTT...TTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp CGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCAAACTGCCACACATCTTaGGCTCTCTGGGTACTACGC +
Preference number: 4 (lower is better)
Translates to: RISTIQVIRLAGFRRARANCHTS*ALWVLR
Trigger: GCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTT...TGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGCACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 4 (lower is better)
Translates to: FAQRLLGGYCQKTSQTSRHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...CCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGACACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 4 (lower is better)
Translates to: SHNGFLEATVRKHHKLAGHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...TCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp ATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACACACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 4 (lower is better)
Translates to: IQVIRLAGFRRARASLMTHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...TGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GATTTTCCCCACTTAGGTTCACGGCCTGTATGTGAATCTACAGCACACAGGTGTCCCGAAGTTGAGAGCTaGGCCTCCAAGTTACAGCTC +
Preference number: 4 (lower is better)
Translates to: DFPHLGSRPVCESTAHRCPEVES*ASKLQL
Trigger: GAGCTGTAACTTGGAGGCTCAGCTCTCAACTTCGGG...ACACCTGTGTGCTGTAGATTCACATACAGGCCGTGAACCTAAGTGGGGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR TCA 90 bp CCTATTATGGTTCAACTTTGTGGTCAAACTAGGTCGGAGAGACAAGTTCCAGTGGCCTTGAGAACGAGCTaGACCCCTAAGGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PIMVQLCGQTRSERQVPVALRTS*TPKEAW
Trigger: CCAGGCCTCCTTAGGGGTTCAGCTCGTTCTCAAGGC...CACTGGAACTTGTCTCTCCGACCTAGTTTGACCACAAAGTTGAACCATAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp AGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTCATTTATCATTTAGCTaGGGAGGCAGGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RLWISEDDKSPSACSCFIHLSFS*GGRLQG
Trigger: TCCCTGCAGCCTGCCTCCTCAGCTAAATGATAAATG...AATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp GATTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTATATGTGTACGTGGATaGAGTGGGGGAGCACATACC +
Preference number: 4 (lower is better)
Translates to: DLARLWISEDDKSPSACSICVRG*SGGAHT
Trigger: GGTATGTGCTCCCCCACTTCATCCACGTACACATAT...AGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp CAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATCCTCCAGTTCAGTCTaGGCTAGGAGAGAATCAGAA +
Preference number: 4 (lower is better)
Translates to: QGFGSPKTTNPLPPALASSSSSV*ARRESE
Trigger: TTCTGATTCTCTCCTAGCTCAGACTGAACTGGAGGA...TGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACTCCCGTTTGCTTAAGTaGTGGGGTTTGCCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENSRLLK*WGLPCL
Trigger: CAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGA...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR GCA 90 bp ATCAGTCCCCAAGTCCACATCTTCCAGCTCCAACCACCACAGCTCACAGTCATTTCCCGTTTGCTTAAGTaGTGGGGTTTGCCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ISPQVHIFQLQPPQLTVISRLLK*WGLPCL
Trigger: CAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGA...AATGACTGTGAGCTGTGGTGGTTGGAGCTGGAAGATGTGGACTTGGGGACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR GCA 90 bp GGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTAGCGAGAATTCCCGTTTaGTTAAGTGCTGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GFGSPKTTNPLPPALASLARIPV*LSAGVC
Trigger: GCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGC...TAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp GGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTATTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: GWKDSAGLCLRTTASWRLFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...TAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAGTGTTCTGTGCGTGTTaGAAGAGAAACCATGCACTG +
Preference number: 4 (lower is better)
Translates to: DSAGLCLRTTASWRLLSEVFCAC*KRNHAL
Trigger: CAGTGCATGGTTTCTCTTGCAACACGCACAGAACAC...TTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACACCACCAAGTCGCTGGTaGCGGGTTCCGGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTPPSRW*RVPGSW
Trigger: CCAGCTCCCCGGAACCCGGCACCAGCGACTTGGTGG...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGCGCGCTGCTGGCGCTaGCCACCAAGTCGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLARCWR*PPSRWC
Trigger: GCACCAGCGACTTGGTGGGCAGCGCCAGCAGCGCGC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CTTCAAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCATCAGCGAGCTGGGGCTaGCCAGCAGCAGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: LQIFSELKGSRASIRKLPSASWG*PAAAFW
Trigger: CCAAAAAGCTGCTGCTGGGCAGCCCCAGCTCGCTGA...TGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAACACTTCCCGTGCCGCTaGGCCCCGAGATCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQHFPCR*APRSLR
Trigger: ACGGAGGGATCTCGGGGCGCAGCGGCACGGGAAGTG...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGAACAAGTGTCGCTaGGTCTGCCCTCTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LKSVPPTHPMGVCRKQVQKNKCR*VCPLLS
Trigger: GCTCAAAAGAGGGCAGACGCAGCGACACTTGTTCTT...CTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCAGCTCATAGGCAATACTaGATAGTCCTCCAACAGAAC +
Preference number: 4 (lower is better)
Translates to: WCIRQSCTARCLRGATCAAHRQY*IVLQQN
Trigger: GTTCTGTTGGAGGACTATGCAGTATTGCCTATGAGC...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGGAGAGGCCCCTCCAGTaGAGAAGTTTATCATGTTGC +
Preference number: 4 (lower is better)
Translates to: LKSVPPTHPMGVCRKQVQERPLQ*RSLSCC
Trigger: GCAACATGATAAACTTCTGCACTGGAGGGGCCTCTC...CTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS-3UTR GCA 90 bp AGCTTCAGAGAATCACACTCTCTAAAAAGGGCCTTGTGTAAAGCCACCTTGCATTCCTCCCACATCGACTaGCCCACAGGCCCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SFRESHSLKRALCKATLHSSHID*PTGPES
Trigger: AGACTCAGGGCCTGTGGGGCAGTCGATGTGGGAGGA...ATGCAAGGTGGCTTTACACAAGGCCCTTTTTAGAGAGTGTGATTCTCTGAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp GGCGGTGGAGAGACCGTCGTCGGACTTGACCGTCATGGGGGACGATTTGTGCATGAAATAATACAAAGATaGCGCAGGGAAGATGAATTG +
Preference number: 4 (lower is better)
Translates to: GGGETVVGLDRHGGRFVHEIIQR*RREDEL
Trigger: CAATTCATCTTCCCTGCGCCATCTTTGTATTATTTC...ATGCACAAATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCTCTCCACCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp CACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATTATGCTTGCGGCGAGACATaGTGGGCTGCGGGGCGGGCG +
Preference number: 4 (lower is better)
Translates to: HQKHIFEKQDSACHIMHYACGET*WAAGRA
Trigger: CGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGC...ATAATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CCA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCGTTTGCTTAAGTGCTaGGGTTTGCCTTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHRLLKC*GLPCLR
Trigger: CCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACG...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp AAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCACAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: KDSAGLCLRTTASWRLLSQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...TGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS-3UTR CCA 90 bp ACCACTGACCTATTATGGTTCAACTTTGTGGTCAAACTAGGTCGGAGAGACAAGGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: TTDLLWFNFVVKLGRRDKVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...CTTGTCTCTCCGACCTAGTTTGACCACAAAGTTGAACCATAATAGGTCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp CTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTCCATGCACTGGTGAATaGCTGTTTGCAAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: LEGLCRTLSSHNGFLEATPCTGE*LFASCT
Trigger: TGTACAACTTGCAAACAGCCATTCACCAGTGCATGG...AGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp ACTGCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGTGAAGCCATGCACTGGTGAATaGCTGTTTGCAAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: TATHLELSGYYAEWGCVKPCTGE*LFASCT
Trigger: TGTACAACTTGCAAACAGCCATTCACCAGTGCATGG...CTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATAGGCTCCATAGCCATTaGATTCAACCGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHRLHSH*IQPQHP
Trigger: AGGGTGCTGCGGTTGAATCCAATGGCTATGGAGCCT...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAGACTTGACCGGGGGCTaGGAGGGAGGAGGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTDLTGG*EGGGAD
Trigger: ATCCGCCCCTCCTCCCTCCCAGCCCCCGGTCAAGTC...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAACGGGTTCCGGGGAGCTaGCGGTGGAGAGACCGTCGT +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQRVPGS*RWRDRR
Trigger: ACGACGGTCTCTCCACCGCCAGCTCCCCGGAACCCG...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAATGCCCACCAAGTCGCTaGTGCCGGGTTCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQCPPSR*CRVPGS
Trigger: GCTCCCCGGAACCCGGCACCAGCGACTTGGTGGGCA...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCGCGAGCTGTTCTCGTaGTGGCGCGCCGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLRELFS*WRAASR
Trigger: CCTGGAGGCGGCGCGCCACCACGAGAACAGCTCGCG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TTGCAAGAGAAACCATGCACTGGTGAATGGCTGTTTGCAAGTTGTACATGTGTATCGCCCAGGACCTGGTaGAAGGCCTCGCTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LQEKPCTGEWLFASCTCVSPRTW*KASLKC
Trigger: GCACTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGA...TACACATGTACAACTTGCAAACAGCCATTCACCAGTGCATGGTTTCTCTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACATCGCAAGTGTCCCTGTaGCCCTCGGCCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTSQVSL*PSASAR
Trigger: CCTGGCCGAGGCCGAGGGCCACAGGGACACTTGCGA...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAAGGGGCTCAGCGAGCTaGGGCTGCCCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTRGSAS*GCPAAA
Trigger: AGCTGCTGCTGGGCAGCCCCAGCTCGCTGAGCCCCT...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAATGCCCTCTTTTGAGCTaGGCCTGCCCGGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKCPLLS*ACPGPD
Trigger: GTCCGGGCCCGGGCAGGCCCAGCTCAAAAGAGGGCA...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAATGCCCTCTTTTGAGCTaGGCCTGCCCGGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQCPLLS*ACPGPD
Trigger: GTCCGGGCCCGGGCAGGCCCAGCTCAAAAGAGGGCA...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGGGTACTACGCCGAATaGGGGTGTGTGAAGAACCCG +
Preference number: 4 (lower is better)
Translates to: GLMRISTIQVIRLAGFRRGYYAE*GCVKNP
Trigger: CGGGTTCTTCACACACCCCCATTCGGCGTAGTACCC...CCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TGTAGCTGCTGGGCTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCAGGGTACTACGCCGAATaGGGGTGTGTGAAGAACAAG +
Preference number: 4 (lower is better)
Translates to: CSCWAHLYKYPAGHILHSGYYAE*GCVKNK
Trigger: CTTGTTCTTCACACACCCCCATTCGGCGTAGTACCC...TGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAGCCCAGCAGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCAAGCATGCTTTTAGCATaGTATGGATGGAAGTCACGG +
Preference number: 4 (lower is better)
Translates to: WCIRQSCTARCLRGATCASMLLA*YGWKSR
Trigger: CCGTGACTTCCATCCATACCATGCTAAAAGCATGCT...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACGTTGCCCAGGCTGGGTaGAAAGTGTTATGTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SAGLCLRTTASWRLLSENVAQAG*KVLCSS
Trigger: GGAAGAACATAACACTTTCCACCCAGCCTGGGCAAC...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS-3UTR CCA 90 bp CATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTCATGTTGCCCAGGCTaGGTGGAAAGTGTTATGTTC +
Preference number: 4 (lower is better)
Translates to: HLLPISQICSSYPPDGCLSCCPG*VESVMF
Trigger: GAACATAACACTTTCCACCCAGCCTGGGCAACATGA...CAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS-3UTR CCA 90 bp CTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTCAGGGTTATTTGTCATaGAAAAGCCACAGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LEGLCRTLSSHNGFLEATQGYLS*KSHRGK
Trigger: CTTTCCCCTGTGGCTTTTCCATGACAAATAACCCTG...AGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CCA 90 bp GGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTATTAAAGTCAAGGTCATaGTGTCATCCCACCACGGGG +
Preference number: 4 (lower is better)
Translates to: GFGSPKTTNPLPPALASLLKSRS*CHPTTG
Trigger: CCCCGTGGTGGGATGACACCATGACCTTGACTTTAA...TAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp TTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCGTGCTTTAGAGAAATaGGCTGGGGGTACACACACA +
Preference number: 4 (lower is better)
Translates to: FSKALDLRRRQIPFRLLLRALEK*AGGTHT
Trigger: TGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACG...CAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CAA 72 bp TCTCAGGTACTATGGCAAACTGGCCAAAGAGAAGCGTaGCTAGGAGAATGGACACGGCAGGAAACAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SQVLWQTGQREA*LGEWTRQETAS
Trigger: TGAGGCTGTTTCCTGCCGTGTCCATTCTCCTAGCAACGCTTCTCTTTGGCCAGTTTGCCATAGTACCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR TCA 90 bp CTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGTTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: LKSVPPTHPMGVCRKQVQFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...CTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GGCTGTCATGGACAGTCACATAGAGTAATAGAGAAAGCACTTCACAACTCCTTACGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: GCHGQSHRVIEKALHNSLRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...TAAGGAGTTGTGAAGTGCTTTCTCTATTACTCTATGTGACTGTCCATGACAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp ATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTGAAACCATGCACTGGTaGATGGCTGTTTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: ISCPFLKSVPPTHPMGVCETMHW*MAVCKL
Trigger: CAACTTGCAAACAGCCATTCACCAGTGCATGGTTTC...ACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACGAAACCATGCACTGGTaGATGGCTGTTTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: AHFSNLFLLPTRWVSVGNETMHW*MAVCKL
Trigger: CAACTTGCAAACAGCCATTCACCAGTGCATGGTTTC...GTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TGCATTTTGATTCTCCTTGAAAATTTATGCCATCTGATAAGCGGTAACCTAGTTTGGCCACCACGGACTTaGGCGCGCTGCTGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: CILILLENLCHLISGNLVWPPRT*ARCWRC
Trigger: GCAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCA...AACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR TCA 90 bp GTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAACTGCCACACATCTTaGGCTCTCTGGGTACTACGC +
Preference number: 4 (lower is better)
Translates to: VFAQRLLGGYCQKTSQTSNCHTS*ALWVLR
Trigger: GCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTT...GCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTCACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 4 (lower is better)
Translates to: SVFAQRLLGGYCQKTSQTHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...AGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAAGTACGTGTCTGTGCTaGCTTGTTAAGCAATCCACT +
Preference number: 4 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTSTCLC*LVKQST
Trigger: AGTGGATTGCTTAACAAGTCAGCACAGACACGTACT...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTAAATACCGGGTCAGCTaGATACCCCTTTCTCCACTG +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADIKYRVS*IPLSPL
Trigger: CAGTGGAGAAAGGGGTATTCAGCTGACCCGGTATTT...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGGTCCCAGAGAGCAGGTaGAATAATGCACGAGACAGC +
Preference number: 4 (lower is better)
Translates to: TIQVIRLAGFRRARASLMVPESR*NNARDS
Trigger: GCTGTCTCGTGCATTATTTCACCTGCTCTCTGGGAC...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR TCA 90 bp GGTGATTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCAAGGCTGCTGATATCTaGGGGTGGATATTTGACACA +
Preference number: 4 (lower is better)
Translates to: GDLARLWISEDDKSPSACKAADI*GWIFDT
Trigger: TGTGTCAAATATCCACCCTCAGATATCAGCAGCCTT...GCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp CAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCATCCCGTTTGCTTAAGTaGTGGGGTTTGCCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: QDSVFAQRLLGGYCQKTSSRLLK*WGLPCL
Trigger: CAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGA...TGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR GCA 90 bp TGTAGCTGCTGGGCTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCATCCCGTTTGCTTAAGTaGTGGGGTTTGCCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: CSCWAHLYKYPAGHILHSSRLLK*WGLPCL
Trigger: CAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGA...TGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAGCCCAGCAGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp GCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCTTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: ARLWISEDDKSPSACSCFFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...GAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR GCA 90 bp TGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: WKDSAGLCLRTTASWRLLFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...CAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAATCCATGAGTGTTCTGTaGGTGTTGCAAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: DSAGLCLRTTASWRLLSESMSVL*VLQEKP
Trigger: TGGTTTCTCTTGCAACACGCACAGAACACTCATGGA...TTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp ATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTGGAAAGCGCCCTTCTaGCAGGCCGGAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: MYRNKGLGTHAHFHNTGNWKAPF*QAGSLS
Trigger: AGAGAGGCTTCCGGCCTGGCAGAAGGGCGCTTTCCA...ATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTATGTGGCGCTTCAGCTTaGTGGCCTGGGTGCACGCGT +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVCGASA*WPGCTR
Trigger: ACGCGTGCACCCAGGCCAGCAAGCTGAAGCGCCACA...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATATGGGGGACGATTTGTaGATGTGCGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHMGDDL*MCVFMW
Trigger: CCACATGAAGACGCACATGCACAAATCGTCCCCCAT...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAACTGAGCACCATGCCCTaGATGACGTCGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQLSTMP*MTSGRA
Trigger: CGCCCTGCCCGACGTCATGCAGGGCATGGTGCTCAG...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAAGGTGGCCGCGCTTATaGTTCTCGCCCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVRWPRL*FSPRTW
Trigger: CCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCT...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCACTTCCCGTGCCGCTaGGCCCCGAGATCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLHFPCR*APRSLR
Trigger: ACGGAGGGATCTCGGGGCGCAGCGGCACGGGAAGTG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATGAGAGGCCCCTCCAGTaGAGAAGTTTATCTGCTATG +
Preference number: 4 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHERPLQ*RSLSAM
Trigger: CATAGCAGATAAACTTCTGCACTGGAGGGGCCTCTC...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
CDS-3UTR GCA 90 bp CTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCAC +
Preference number: 4 (lower is better)
Translates to: LSSHNGFLEATVRKHHKLRLEGL*RTLSSH
Trigger: GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT...TAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCAC +
Preference number: 4 (lower is better)
Translates to: GLMRISTIQVIRLAGFRRRLEGL*RTLSSH
Trigger: GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT...CCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp TCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGGCTGGAAGGACTCTaGAGGACTCTGTCTTCGCAC +
Preference number: 4 (lower is better)
Translates to: SVFAQRLLGGYCQKTSQTRLEGL*RTLSSH
Trigger: GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT...AGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp AAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATATTCCCACATCCTGCTaGTATGTGTTCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: KALDLRRRQIPFRLLLLHIPTSC*YVFLFG
Trigger: CCCAAACAGGAACACATAGCAGCAGGATGTGGGAAT...ATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489183.1
CDS-3UTR GCA 90 bp CGTGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCCCTTCCGCCTGCTCTTaGTTCATTAATCATGCCTTA +
Preference number: 4 (lower is better)
Translates to: RALEKWAGGTHTAVFQNFPSACS*FINHAL
Trigger: TAAGGCATGATTAATGAAGCAAGAGCAGGCGGAAGG...GAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp TCAGTTCTGAATAACATGCTGCCAGCCCTATCTGGAAAAGGGTGTGCAAGGCGCCTTATCCTTGGGCCCTaGTCAGAAATGTGCCACATT +
Preference number: 4 (lower is better)
Translates to: SVLNNMLPALSGKGCARRLILGP*SEMCHI
Trigger: AATGTGGCACATTTCTGAGCAGGGCCCAAGGATAAG...GCGCCTTGCACACCCTTTTCCAGATAGGGCTGGCAGCATGTTATTCAGAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CGTGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCAATACACTCCACAAATaGAGCTTCCCTAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RALEKWAGGTHTAVFQNFNTLHK*SFPSSR
Trigger: TCTGCTGCTAGGGAAGCTGCATTTGTGGAGTGTATT...GAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp GATTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTGGAATTGTGCAGACGTaGTTTAGAGAAATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: DLARLWISEDDKSPSACSGIVQT*FREMGW
Trigger: CCAGCCCATTTCTCTAAAGCACGTCTGCACAATTCC...AGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACCGTTTGCTTAAGTGCTaGGGTTTGCCTTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LCLRTTASWRLLSENITNRLLKC*GLPCLR
Trigger: CCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACG...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp AAATCAGTCCCCAAGTCCACATCTTCCAGCTCCAACCACCACAGCTCACAGTCACAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: KSVPKSTSSSSNHHSSQSQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...TGACTGTGAGCTGTGGTGGTTGGAGCTGGAAGATGTGGACTTGGGGACTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp CCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAATCATAGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: PTHPMGVCRKQVQKYKIIAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...TATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR CCA 90 bp ATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: MYRNKGLGTHAHFHNTGNVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...ATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp GAATTCATTTGTCTTGGAAGAAAGTGTTCTCCTGGACGGTTCTGCACAGAATTCTCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: EFICLGRKCSPGRFCTEFSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...GAATTCTGTGCAGAACCGTCCAGGAGAACACTTTCTTCCAAGACAAATGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp GTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: VFAQRLLGGYCQKTSQTSTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...GCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGAATCCCATGGAGAGGTaGCTGGGAAGGACATTCTGC +
Preference number: 4 (lower is better)
Translates to: AQRLLGGYCQKTSQTSRMNPMER*LGRTFC
Trigger: GCAGAATGTCCTTCCCAGCCACCTCTCCATGGGATT...CATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp CGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACAGACAGGCTCCATAGCCATTaGATTCAACCGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: RLLGGYCQKTSQTSRMTDRLHSH*IQPQHP
Trigger: AGGGTGCTGCGGTTGAATCCAATGGCTATGGAGCCT...GTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAGCCTGGGGACAGCGGTaGGCTAGACGTGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKAWGQR*ARRVPC
Trigger: GCAGGGAACACGTCTAGCCCACCGCTGTCCCCAGGC...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGACTTGACCGGGGGCTaGGAGGGAGGAGGGGCGGAT +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLDLTGG*EGGGAD
Trigger: ATCCGCCCCTCCTCCCTCCCAGCCCCCGGTCAAGTC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCGGGTTCCGGGGAGCTaGCGGTGGAGAGACCGTCGT +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLRVPGS*RWRDRR
Trigger: ACGACGGTCTCTCCACCGCCAGCTCCCCGGAACCCG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCTGCCCACCAAGTCGCTaGTGCCGGGTTCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLCPPSR*CRVPGS
Trigger: GCTCCCCGGAACCCGGCACCAGCGACTTGGTGGGCA...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGAGCTGTTCTCGTGGTaGCGCGCCGCCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLELFSW*RAASRL
Trigger: GAGCCTGGAGGCGGCGCGCCACCACGAGAACAGCTC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGAGCTGTTCTCGTGGTaGCGCGCCGCCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLELFSW*RAASRL
Trigger: GAGCCTGGAGGCGGCGCGCCACCACGAGAACAGCTC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACATCGGCCTCGGCCAGGTaGCCGCGCTTATGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTSASAR*PRLCFS
Trigger: CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGA...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCAGGGGCTCAGCGAGCTaGGGCTGCCCAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLRGSAS*GCPAAA
Trigger: AGCTGCTGCTGGGCAGCCCCAGCTCGCTGAGCCCCT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAACACGTTCTCCGTGTTaGGCATCGCGGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQTRSPC*ASRPGA
Trigger: TGCCCCCGGCCGCGATGCCCAACACGGAGAACGTGT...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp AGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTTACATGTGTAGCTGCTaGGCTCATCTTTACAAATAC +
Preference number: 4 (lower is better)
Translates to: RLEGLCRTLSSHNGFLEAYMCSC*AHLYKY
Trigger: GTATTTGTAAAGATGAGCCCAGCAGCTACACATGTA...AGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR CCA 90 bp TCTGGGTACTACGCCGAATGGGGGTGTGTGAAGAACAAGTGTCGCTGCGTCTGCTACATGTGTAGCTGCTaGGCTCATCTTTACAAATAC +
Preference number: 4 (lower is better)
Translates to: SGYYAEWGCVKNKCRCVCYMCSC*AHLYKY
Trigger: GTATTTGTAAAGATGAGCCCAGCAGCTACACATGTA...GCAGACGCAGCGACACTTGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCGCACAACGGCTTCTTaGAGGCTACTGTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHRTTAS*RLLSEN
Trigger: GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCG...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTCTCCTACCCACCCGATaGGTGTCTGTAGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: SVFAQRLLGGYCQKTSQTLLPTR*VSVGNR
Trigger: CCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAG...AGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGTGAAGAACAAGTGTCGCTGCTTATCTCAGGTACTATaGCAAACTGGCCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: ELSGYYAEWGCVKNKCRCLSQVL*QTGQRE
Trigger: TTCTCTTTGGCCAGTTTGCCATAGTACCTGAGATAA...GCAGCGACACTTGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CCA 90 bp AGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTCAGTGGAGTCTGGACTaGACATTTGTAAGGGTGACA +
Preference number: 4 (lower is better)
Translates to: RLWISEDDKSPSACSCFIQWSLD*TFVRVT
Trigger: TGTCACCCTTACAAATGTCCAGTCCAGACTCCACTG...AATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CAA 72 bp GGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTaGGAGGCTACTGTCAGAAAACATCACAAACTAGCA +
Preference number: 4 (lower is better)
Translates to: GLCRTLSSHNGF*EATVRKHHKLA
Trigger: TGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
3UTR CAA 72 bp GGACTCATGCGCATTTCCACAATACAGGTAATTAGGTaGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATG +
Preference number: 4 (lower is better)
Translates to: GLMRISTIQVIR*AGFRRARASLM
Trigger: CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
3UTR CAA 72 bp GGAGGCCTGGCCAGATGTTCTGAGTCAAACAAGTCATaGGCTGAACTGCAAATGCCTATATGGCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: GGLARCSESNKS*AELQMPIWPLC
Trigger: GCAAAGTGGCCATATAGGCATTTGCAGTTCAGCCAATGACTTGTTTGACTCAGAACATCTGGCCAGGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CAA 72 bp CAGGCTCTCAAAAATCGGAAACCGTTAGTTAGCACCTaGTTTTCACCACCAGGGCACTCGTGTACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QALKNRKPLVST*FSPPGHSCTLR
Trigger: CCTCAAGGTACACGAGTGCCCTGGTGGTGAAAACAAGGTGCTAACTAACGGTTTCCGATTTTTGAGAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCAGAAACCATGCACTGGTaGATGGCTGTTTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: RISTIQVIRLAGFRRARAETMHW*MAVCKL
Trigger: CAACTTGCAAACAGCCATTCACCAGTGCATGGTTTC...TGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAATCAAAGGCACTCGGGTaGTGGGTGGCCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQSKALG*WVARAI
Trigger: GATGGCCCTGGCCACCCATCACCCGAGTGCCTTTGA...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCCGCATGACTTGGACTTaGCCGGGGGCTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLRMTWT*PGAGRE
Trigger: CTCCCTCCCAGCCCCCGGTCAAGTCCAAGTCATGCG...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCGCATGACTTGGACTTaGCCGGGGGCTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLRMTWT*PGAGRE
Trigger: CTCCCTCCCAGCCCCCGGTCAAGTCCAAGTCATGCG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAGCCGCAGAACTCGCATaGCTTGGACTTGACCGGGGG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTAAELA*LGLDRG
Trigger: CCCCCGGTCAAGTCCAAGTCATGCGAGTTCTGCGGC...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAGCCGCAGAACTCGCATaGCTTGGACTTGACCGGGGG +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKAAELA*LGLDRG
Trigger: CCCCCGGTCAAGTCCAAGTCATGCGAGTTCTGCGGC...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGCCCTCTCTATGGGACTaGTTCACTGTTCCAATGTGG +
Preference number: 4 (lower is better)
Translates to: AQRLLGGYCQKTSQTSRMPSLWD*FTVPMW
Trigger: CCACATTGGAACAGTGAATCAGTCCCATAGAGAGGG...CATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp AATAAGAAACTACTGACATTTATCACCTTCTTTAGGATTTACCGCTCGCCCAGTCCAGGGCATCACTCATaGCAGCGATGGTCCACGGGC +
Preference number: 4 (lower is better)
Translates to: NKKLLTFITFFRIYRSPSPGHHS*QRWSTG
Trigger: GCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGG...ACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR TCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTGGTCTGGTTTACTTCTaGGGAGTGCAAATCCTGTTG +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADIGLVYF*GVQILL
Trigger: CAACAGGATTTGCACTCCTCAGAAGTAAACCAGACC...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp TGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCGCTATCCTGCCTACATCTaGTTCAGTGAGGTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: CFREMGWGYTHSRLPELRYPAYI*FSEVEN
Trigger: ATTTTCCACCTCACTGAATCAGATGTAGGCAGGATA...GCGAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp CTTAAAGTCAAGGTCATGGTGTCATCCCACCACGGGGCTGTGTTTAATTACAGCCAGAGAGAAGGTGTCTaGTGTGTGTACCTATCCTGC +
Preference number: 4 (lower is better)
Translates to: LKVKVMVSSHHGAVFNYSQREGV*CVYLSC
Trigger: GCAGGATAGGTACACACATCAGACACCTTCTCTCTG...GCTGTAATTAAACACAGCCCCGTGGTGGGATGACACCATGACCTTGACTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp TTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGTCCCCTCTAGACCACTaGCCTATTATGGTTCAACTT +
Preference number: 4 (lower is better)
Translates to: FSKALDLRRRQIPFRLLLSPLDH*PIMVQL
Trigger: AAGTTGAACCATAATAGGTCAGTGGTCTAGAGGGGA...CAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp GATTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTCCCAGCACGCTTAAATaGCTACCTTTTATGTGGTTG +
Preference number: 4 (lower is better)
Translates to: DLARLWISEDDKSPSACSPSTLK*LPFMWL
Trigger: CAACCACATAAAAGGTAGTCATTTAAGCGTGCTGGG...AGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp TGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCGCAGTACAGGCTCACAGTaGACTCAAATCCAACTTACA +
Preference number: 4 (lower is better)
Translates to: CFREMGWGYTHSRLPELRSTGSQ*TQIQLT
Trigger: TGTAAGTTGGATTTGAGTTCACTGTGAGCCTGTACT...GCGAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp AAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATCAAGTCAAAGGCTGCTaGTATCTGAGGGTGGATATT +
Preference number: 4 (lower is better)
Translates to: KALDLRRRQIPFRLLLLHQVKGC*YLRVDI
Trigger: AATATCCACCCTCAGATATCAGCAGCCTTTGACTTG...ATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp GATTTTCCCCACTTAGGTTCACGGCCTGTATGTGAATCTACAGCACACAGGTGTTCCCGTTTGCTTAAGTaGTGGGGTTTGCCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: DFPHLGSRPVCESTAHRCSRLLK*WGLPCL
Trigger: CAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGA...ACACCTGTGTGCTGTAGATTCACATACAGGCCGTGAACCTAAGTGGGGAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR GCA 90 bp TCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGAGCGAGAATTCCCGTTTaGTTAAGTGCTGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SHNGFLEATVRKHHKLAGARIPV*LSAGVC
Trigger: GCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGC...TCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR GCA 90 bp CCGACAAGCAGGTGCACTCCCAGTGTTCAGAACTGGAATTCATTTGTCTTGGAAGCGAGAATTCCCGTTTaGTTAAGTGCTGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: PTSRCTPSVQNWNSFVLEARIPV*LSAGVC
Trigger: GCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGC...TTCCAAGACAAATGAATTCCAGTTCTGAACACTGGGAGTGCACCTGCTTGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR GCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp TGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCGCTTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: CFREMGWGYTHSRLPELRFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...GCGAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp CCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTGTTCTGTGCGTGTTaGAAGAGAAACCATGCACTG +
Preference number: 4 (lower is better)
Translates to: PFLKSVPPTHPMGVCRKQVFCAC*KRNHAL
Trigger: CAGTGCATGGTTTCTCTTGCAACACGCACAGAACAC...CTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GAGGAGGCAAAAGGCGATTGTCTGGAGTCTCCGAAGCTAAGGAAGGGATCTTTGTCCATGAGTGTTCTGTaGGTGTTGCAAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: EEAKGDCLESPKLRKGSLSMSVL*VLQEKP
Trigger: TGGTTTCTCTTGCAACACGCACAGAACACTCATGGA...CAAAGATCCCTTCCTTAGCTTCGGAGACTCCAGACAATCGCCTTTTGCCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR GCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACACCCCCAGGCGCTCTATaGGGTGGGGGTCCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTPPGAL*GGGPSD
Trigger: ATCACTTGGACCCCCACCGCATAGAGCGCCTGGGGG...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAACCCCCAGGCGCTCTATaGGGTGGGGGTCCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKPPGAL*GGGPSD
Trigger: ATCACTTGGACCCCCACCGCATAGAGCGCCTGGGGG...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTGCTAGACGTGTTCCCTaGCAGCTCTCTAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SVFAQRLLGGYCQKTSQTARRVP*QLSKSP
Trigger: AGGAGACTTAGAGAGCTGGCAGGGAACACGTCTAGC...AGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp TTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAACCTGGCTGGAATGGTTaGAGTAACCTTTGCATAGGG +
Preference number: 4 (lower is better)
Translates to: FLLPTRWVSVGNRYRSTKPGWNG*SNLCIG
Trigger: CCCTATGCAAAGGTTACTGCAACCATTCCAGCCAGG...TTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCCTGAGCACCATGCCCTaGATGACGTCGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLLSTMP*MTSGRA
Trigger: CGCCCTGCCCGACGTCATGCAGGGCATGGTGCTCAG...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp ATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATGCCTCGCTGAAGTGCTaGATGGAGCTGAGCACCATG +
Preference number: 4 (lower is better)
Translates to: MYRNKGLGTHAHFHNTGNASLKC*MELSTM
Trigger: CATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGC...ATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAACAGTGCCATCGTCTATaGGGTCCGACTCGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKQCHRL*GPTRRP
Trigger: TGGCCGGCGAGTCGGACCGCATAGACGATGGCACTG...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTATCAGCGAGCTGGGGCTaGCCAGCAGCAGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVSASWG*PAAAFW
Trigger: CCAAAAAGCTGCTGCTGGGCAGCCCCAGCTCGCTGA...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GTAGCCACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCCTGCGGGGCATATTCTaGACTCATCCCAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: VATKSIYLKNRIRRAILCLRGIF*THPRRG
Trigger: CCCACGCCTGGGATGAGTGCAGAATATGCCCCGCAG...GCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
CDS-3UTR GCA 90 bp TACATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTCTTTACAAATACCCTaGGGGGCATATTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: YISCPFLKSVPPTHPMGVSLQIP*GAYSAL
Trigger: GAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGA...GACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR GCA 90 bp CTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTCCTTGAAAATTTATaGCATCTGATAAGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: LGWKDSAGLCLRTTASWRLLENL*HLISGN
Trigger: GTTACCGCTTATCAGATGGCATAAATTTTCAAGGAG...CCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GATTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTGTCATTCCCACATCCTaGTGCTATGTGTTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: DLARLWISEDDKSPSACSVIPTS*CYVFLF
Trigger: AAACAGGAACACATAGCAGCAGGATGTGGGAATGAC...AGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489183.1
CDS-3UTR GCA 90 bp GATTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTCCTTCCGCCTGCTCTTaGTTCATTAATCATGCCTTA +
Preference number: 4 (lower is better)
Translates to: DLARLWISEDDKSPSACSPSACS*FINHAL
Trigger: TAAGGCATGATTAATGAAGCAAGAGCAGGCGGAAGG...AGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR GCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAATAGCCAAGGCTTCCTaGCATCAAACTGCTAACAAT +
Preference number: 4 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTIAKAS*HQTANN
Trigger: ATTGTTAGCAGTTTGATGGCAGGAAGCCTTGGCTAT...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CCGACAAGCAGGTGCACTCCCAGTGTTCAGAACTGGAATTCATTTGTCTTGGAATGTGTAAAGCCACCTTaGATGTCAGCCCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PTSRCTPSVQNWNSFVLECVKPP*MSAQAP
Trigger: AGGAGCTTGGGCTGACATGCAAGGTGGCTTTACACA...TTCCAAGACAAATGAATTCCAGTTCTGAACACTGGGAGTGCACCTGCTTGTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR GCA 90 bp GCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGAGGAAGAGGCAACTCTaGATGCCTTTACCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: AQRLLGGYCQKTSQTSRMRKRQL*MPLPKA
Trigger: GGCCTTTGGTAAAGGCATGCAGAGTTGCCTCTTCCT...CATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CCA 90 bp CGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCACAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: RISTIQVIRLAGFRRARAQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...TGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADIQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp AGCTTCAGAGAATCACACTCTCTAAAAAGGGCCTTGTGTAAAGCCACCTTGCATGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: SFRESHSLKRALCKATLHAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...ATGCAAGGTGGCTTTACACAAGGCCCTTTTTAGAGAGTGTGATTCTCTGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAACACTCGGGTGATGGGTaGCCAGGGCCATCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQHSGDG*PGPSLP
Trigger: CGGAAGAGATGGCCCTGGCCACCCATCACCCGAGTG...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGCCTGGGGACAGCGGTaGGCTAGACGTGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLAWGQR*ARRVPC
Trigger: GCAGGGAACACGTCTAGCCCACCGCTGTCCCCAGGC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAGGCTTGCTACCTGGCTaGAATGGTTGCAGTAACCTT +
Preference number: 4 (lower is better)
Translates to: DSVFAQRLLGGYCQKTSQGLLPG*NGCSNL
Trigger: AAGGTTACTGCAACCATTCCAGCCAGGTAGCAAGCC...TTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTATTCTCGCCCAGGACCTaGTGGAAGGCCTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVFSPRT*WKASLK
Trigger: CTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGAGAA...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTCGGCCTCGGCCAGGTaGCCGCGCTTATGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLSASAR*PRLCFS
Trigger: CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCACACGTTCTCCGTGTTaGGCATCGCGGCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLTRSPC*ASRPGA
Trigger: TGCCCCCGGCCGCGATGCCCAACACGGAGAACGTGT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAGGCCTTTCGCCCGTGTaGCTTCTCCTGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVGLSPV*LLLWTV
Trigger: CACTGTCCACAGGAGAAGCCACACGGGCGAAAGGCC...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp ATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGGGTACTACGCCGAATaGGGGTGTGTGAAGAACCCG +
Preference number: 4 (lower is better)
Translates to: IECIETRGWGLMRISTIQGYYAE*GCVKNP
Trigger: CGGGTTCTTCACACACCCCCATTCGGCGTAGTACCC...CTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAACGCACAACGGCTTCTTaGAGGCTACTGTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: DSVFAQRLLGGYCQKTSQRTTAS*RLLSEN
Trigger: GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCG...TTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAACGCACAACGGCTTCTTaGAGGCTACTGTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: FLLPTRWVSVGNRYRSTKRTTAS*RLLSEN
Trigger: GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCG...TTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGGACAACACATGGAAATaGTCATTCCCACATCCTGCT +
Preference number: 4 (lower is better)
Translates to: FSKALDLRRRQIPFRLLLDNTWK*SFPHPA
Trigger: AGCAGGATGTGGGAATGACCATTTCCATGTGTTGTC...CAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR CCA 90 bp AAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATGACAACACATGGAAATaGTCATTCCCACATCCTGCT +
Preference number: 4 (lower is better)
Translates to: KALDLRRRQIPFRLLLLHDNTWK*SFPHPA
Trigger: AGCAGGATGTGGGAATGACCATTTCCATGTGTTGTC...ATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR CCA 90 bp TTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCGATTTAGCAAGGCTTTaGATCTCCGAAGACGACAAA +
Preference number: 4 (lower is better)
Translates to: LARLWISEDDKSPSACSCDLARL*ISEDDK
Trigger: TTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATC...GCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR CCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTGCTTTTAGCATGGTATaGATGGAAGTCACGGTAGGG +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADIAFSMV*MEVTVG
Trigger: CCCTACCGTGACTTCCATCCATACCATGCTAAAAGC...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTCAAATAAAAAGCCCCTaGATCTCACAGATGGACCCC +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADIQIKSP*ISQMDP
Trigger: GGGGTCCATCTGTGAGATCCAGGGGCTTTTTATTTG...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp TGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAATACCAAAGGCCATCCTaGGTCTGTATGTGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: CPFLKSVPPTHPMGVCRKYQRPS*VCMCKP
Trigger: TGGCTTACACATACAGACCCAGGATGGCCTTTGGTA...TTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CCA 90 bp AGACTTGGAATTGTGCAGACGTGCTTTAGAGAAATGGGCTGGGGGTACACACACAAGGTTTACCTCACCTaGGTCACAGCACTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: RLGIVQTCFREMGWGYTHKVYLT*VTALVV
Trigger: CACAACAAGTGCTGTGACCCAGGTGAGGTAAACCTT...GTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACGTCTGCACAATTCCAAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CAA 72 bp AAGTCACAAACAGGCCACTCGTGCAATCAGGGTTATTaGTCATGGAAAAGCCACAGGGGAAAGGTGATGGCA +
Preference number: 4 (lower is better)
Translates to: KSQTGHSCNQGY*SWKSHRGKVMA
Trigger: TGCCATCACCTTTCCCCTGTGGCTTTTCCATGACAAATAACCCTGATTGCACGAGTGGCCTGTTTGTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR TCA 90 bp ATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATATGGCGCAGGGAAGATaGATTGTGGGAGAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: MYRNKGLGTHAHFHNTGNMAQGR*IVGEPS
Trigger: TGACGGCTCTCCCACAATTCATCTTCCCTGCGCCAT...ATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
CDS-3UTR TCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACACAGGTGAGGAGGTCATaGTCCCCTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTQVRRS*SPSGAP
Trigger: GGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTG...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAGGCACTGCCCACAGGTaGGGAGGTCATGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTGTAHR*GGHDPL
Trigger: AAGGGGATCATGACCTCCTCACCTGTGGGCAGTGCC...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACACGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAACGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACGAAACCATGCACTGGTaGATGGCTGTTTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LCLRTTASWRLLSENITNETMHW*MAVCKL
Trigger: CAACTTGCAAACAGCCATTCACCAGTGCATGGTTTC...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTCAAAGGCACTCGGGTaGTGGGTGGCCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLSKALG*WVARAI
Trigger: GATGGCCCTGGCCACCCATCACCCGAGTGCCTTTGA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAGACCGTCGTCGGACTTaGCCGTCATGGGGGACGATT +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKDRRRT*PSWGTI
Trigger: AATCGTCCCCCATGACGGTCAAGTCCGACGACGGTC...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp ATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGCACAAACTAGCAGGATaGCAGACCACGCTGACGTCG +
Preference number: 4 (lower is better)
Translates to: IECIETRGWGLMRISTIQHKLAG*QTTLTS
Trigger: CGACGTCAGCGTGGTCTGTCATCCTGCTAGTTTGTG...CTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGACCCTCTCTATGGGACTaGTTCACTGTTCCAATGTGG +
Preference number: 4 (lower is better)
Translates to: WGLMRISTIQVIRLAGFRPSLWD*FTVPMW
Trigger: CCACATTGGAACAGTGAATCAGTCCCATAGAGAGGG...TCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTCCCTCTCTATGGGACTaGTTCACTGTTCCAATGTGG +
Preference number: 4 (lower is better)
Translates to: SVFAQRLLGGYCQKTSQTPSLWD*FTVPMW
Trigger: CCACATTGGAACAGTGAATCAGTCCCATAGAGAGGG...AGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GGCTTCAAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCCCTCTCTATGGGACTaGTTCACTGTTCCAATGTGG +
Preference number: 4 (lower is better)
Translates to: GFKFSQNLRALELPSENCPSLWD*FTVPMW
Trigger: CCACATTGGAACAGTGAATCAGTCCCATAGAGAGGG...GCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479026.2
ENST00000647472.1
CDS-3UTR TCA 90 bp CCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAATCATATTCACGGCCTGTATGTaGATCTACAGCACACAGGTG +
Preference number: 4 (lower is better)
Translates to: PTHPMGVCRKQVQKYKIIFTACM*IYSTQV
Trigger: CACCTGTGTGCTGTAGATTCACATACAGGCCGTGAA...TATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR TCA 90 bp GCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCTTACTCCATATTTGGTaGTTTAGCAAGGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: ARLWISEDDKSPSACSCFLLHIW*FSKALD
Trigger: ATCCAAAGCCTTGCTAAATCACCAAATATGGAGTAA...GAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR TCA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTGGCACTCGTGTACCTTaGGGGAGACACTGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VYLELVKENTSGLVLLVFGTRVP*GRHWEP
Trigger: GGGCTCCCAGTGTCTCCCTCAAGGTACACGAGTGCC...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CAAGCAGGTGCACTCCCAGTGTTCAGAACTGGAATTCATTTGTCTTGGAAGAAAGAGGATCCCTTCCAGTaGGGTTCAAGACTGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QAGALPVFRTGIHLSWKKEDPFQ*GSRLKL
Trigger: CAGCTTCAGTCTTGAACCTCACTGGAAGGGATCCTC...TTTCTTCCAAGACAAATGAATTCCAGTTCTGAACACTGGGAGTGCACCTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR TCA 90 bp AAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATCAGGGTGGGAACAGGTaGTTAAACACAATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: KALDLRRRQIPFRLLLLHQGGNR*LNTMKE
Trigger: TTCTTTCATTGTGTTTAATCACCTGTTCCCACCCTG...ATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp GGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGTCCCGTTTGCTTAAGTaGTGGGGTTTGCCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: GLMRISTIQVIRLAGFRRSRLLK*WGLPCL
Trigger: CAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGA...CCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR GCA 90 bp GACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAGTGTTCTGTGCGTGTTaGAAGAGAAACCATGCACTG +
Preference number: 4 (lower is better)
Translates to: DSVFAQRLLGGYCQKTSQVFCAC*KRNHAL
Trigger: CAGTGCATGGTTTCTCTTGCAACACGCACAGAACAC...TTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp CTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCGTGTTCTGTGCGTGTTaGAAGAGAAACCATGCACTG +
Preference number: 4 (lower is better)
Translates to: LMRISTIQVIRLAGFRRAVFCAC*KRNHAL
Trigger: CAGTGCATGGTTTCTCTTGCAACACGCACAGAACAC...GGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp CAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCATCCATGAGTGTTCTGTaGGTGTTGCAAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: QDSVFAQRLLGGYCQKTSSMSVL*VLQEKP
Trigger: TGGTTTCTCTTGCAACACGCACAGAACACTCATGGA...TGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAGGTTGCAGTAACCTTTaGATAGGGCTGGGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVGCSNL*IGLGRP
Trigger: AGGCCGGCCCAGCCCTATGCAAAGGTTACTGCAACC...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTCCTGGCTGGAATGGTTaGAGTAACCTTTGCATAGGG +
Preference number: 4 (lower is better)
Translates to: SVFAQRLLGGYCQKTSQTPGWNG*SNLCIG
Trigger: CCCTATGCAAAGGTTACTGCAACCATTCCAGCCAGG...AGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTGTGGCGCTTCAGCTTaGTGGCCTGGGTGCACGCGT +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLCGASA*WPGCTR
Trigger: ACGCGTGCACCCAGGCCAGCAAGCTGAAGCGCCACA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAAAGGCCTCGCTGAAGTaGTGCATGGAGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVKASLK*CMELST
Trigger: GGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTT...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCAGGTGGCCGCGCTTATaGTTCTCGCCCAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLRWPRL*FSPRTW
Trigger: CCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCAGTGCCATCGTCTATaGGGTCCGACTCGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLQCHRL*GPTRRP
Trigger: TGGCCGGCGAGTCGGACCGCATAGACGATGGCACTG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAATCAGCGAGCTGGGGCTaGCCAGCAGCAGCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKSASWG*PAAAFW
Trigger: CCAAAAAGCTGCTGCTGGGCAGCCCCAGCTCGCTGA...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTACCGTTCTCCGAGGAGTaGTCCGACGAGGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVPFSEE*SDEEAK
Trigger: TTTTGCCTCCTCGTCGGAGCACTCCTCGGAGAACGG...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp ATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCTTGTACATGTGTAGCTaGTGGGCTCATCTTTACAAA +
Preference number: 4 (lower is better)
Translates to: IRLAGFRRARASLMTAMVLYMCS*WAHLYK
Trigger: TTTGTAAAGATGAGCCCAGCAGCTACACATGTACAA...GACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR GCA 90 bp AAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTGAGCTCTCTGGGTTTGTACATGTGTAGCTaGTGGGCTCATCTTTACAAA +
Preference number: 4 (lower is better)
Translates to: KGSRASIRKLPHILSSLGLYMCS*WAHLYK
Trigger: TTTGTAAAGATGAGCCCAGCAGCTACACATGTACAA...ACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR GCA 90 bp CTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGAAACAGGATTCGGCGTaGCATATTATGCATTATTTA +
Preference number: 4 (lower is better)
Translates to: LGWKDSAGLCLRTTASWRKQDSA*HIMHYL
Trigger: TAAATAATGCATAATATGGCACGCCGAATCCTGTTT...CCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR GCA 90 bp AGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTAAACAGGATTCGGCGTaGCATATTATGCATTATTTA +
Preference number: 4 (lower is better)
Translates to: RLEGLCRTLSSHNGFLEAKQDSA*HIMHYL
Trigger: TAAATAATGCATAATATGGCACGCCGAATCCTGTTT...AGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR GCA 90 bp AGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTAAATCCCCTTCCGCCTaGTCTTGCTTCATTAATCAT +
Preference number: 4 (lower is better)
Translates to: RLWISEDDKSPSACSCFIKSPSA*SCFINH
Trigger: ATGATTAATGAAGCAAGAGCAGGCGGAAGGGGATTT...AATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR GCA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCATGGTGAACGGGTCATaGAGACATCAGCTGACATTC +
Preference number: 4 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSMVNGS*RHQLTF
Trigger: GAATGTCAGCTGATGTCTGCATGACCCGTTCACCAT...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTGGAATCAATTATGCATaGAGTTGGCCGGAGACCAAA +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADIGINYA*SWPETK
Trigger: TTTGGTCTCCGGCCAACTGCATGCATAATTGATTCC...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCGTGTGGAATCAATTATaGATGCAGTTGGCCGGAGAC +
Preference number: 4 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSVWNQL*MQLAGD
Trigger: GTCTCCGGCCAACTGCATGCATAATTGATTCCACAC...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp AACATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATAGCGCTCGGGAAACTTTaGCCGAGGAGAGGACAGCAA +
Preference number: 4 (lower is better)
Translates to: NIECIETRGWGLMRISTIALGKL*PRRGQQ
Trigger: TTGCTGTCCTCTCCTCGGGCAAAGTTTCCCGAGCGC...TATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR GCA 90 bp GACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACCTCCCTTTCTCAGTaGACACATCTGTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: DSVFAQRLLGGYCQKTSQTSLSQ*THLLVG
Trigger: TCCTACCAACAGATGTGTGCACTGAGAAAGGGAGGT...TTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CCA 90 bp AGCTTCAGAGAATCACACTCTCTAAAAAGGGCCTTGTGTAAAGCCACCTTGCATCGTTTGCTTAAGTGCTaGGGTTTGCCTTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SFRESHSLKRALCKATLHRLLKC*GLPCLR
Trigger: CCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACG...ATGCAAGGTGGCTTTACACAAGGCCCTTTTTAGAGAGTGTGATTCTCTGAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAATCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp ACTCAGAAATACTTCTTTCCATCTGGGTCATGTTTTGGAGGATCCCTTCCAGTGACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: TQKYFFPSGSCFGGSLPVTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...CACTGGAAGGGATCCTCCAAAACATGACCCAGATGGAAAGAAGTATTTCTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCCACTCGGGTGATGGGTaGCCAGGGCCATCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLHSGDG*PGPSLP
Trigger: CGGAAGAGATGGCCCTGGCCACCCATCACCCGAGTG...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GAAACAGGTACAGAAGTACAAAATCATAAGCAGCCTCATTGTCTTATAAGCATTGCCTGGGGACAGCGGTaGGCTAGACGTGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ETGTEVQNHKQPHCLISIAWGQR*ARRVPC
Trigger: GCAGGGAACACGTCTAGCCCACCGCTGTCCCCAGGC...AATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCTCGCCCAGGACCTGGTaGAAGGCCTCGCTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLSPRTW*KASLKC
Trigger: GCACTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGA...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACATTCTCGCCCAGGACCTaGTGGAAGGCCTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTFSPRT*WKASLK
Trigger: CTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGAGAA...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAGGCCTTTCGCCCGTGTaGCTTCTCCTGTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTGLSPV*LLLWTV
Trigger: CACTGTCCACAGGAGAAGCCACACGGGCGAAAGGCC...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACACGCACAACGGCTTCTTaGAGGCTACTGTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: QRLLGGYCQKTSQTSRMTRTTAS*RLLSEN
Trigger: GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCG...TGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GCCACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATTGCTGCAGGCCTAGGCTaGAAGGACTCTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: ATKSIYLKNRIRRAILCIAAGLG*KDSAGL
Trigger: GAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGC...AATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR CCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACATAGAAACAAGGGGTTaGGGACTCATGCGCATTTCC +
Preference number: 4 (lower is better)
Translates to: LCLRTTASWRLLSENITNIETRG*GLMRIS
Trigger: GGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTAT...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp AGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTTCTGTGCAAATTAACTaGGCCAGAAAGAATTTTTAC +
Preference number: 4 (lower is better)
Translates to: RLEGLCRTLSSHNGFLEASVQIN*ARKNFY
Trigger: GTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAGA...AGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTGTACAGGAACAGACTTaGCACATAGTGCTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADIVQEQT*HIVLCA
Trigger: AGCACAAAGCACTATGTGCCAAGTCTGTTCCTGTAC...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAAGGAGGTGCAGGGATTaGCCAAATATTAAAACTCTA +
Preference number: 4 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTRRCRD*PNIKTL
Trigger: TAGAGTTTTAATATTTGGCCAATCCCTGCACCTCCT...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTAGTATCGTGGGAACCTaGATTTGCAGGCTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADISIVGT*ICRLSN
Trigger: ATTGGAAAGCCTGCAAATCCAGGTTCCCACGATACT...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp TTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGTGTAAGGGTGACATGTaGCTGTGTAAACCACAAACA +
Preference number: 4 (lower is better)
Translates to: FSKALDLRRRQIPFRLLLCKGDM*LCKPQT
Trigger: TGTTTGTGGTTTACACAGCCACATGTCACCCTTACA...CAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAGTTCAAGTGCGGACGTaGCGTCCCTGCGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVVQVRT*RPCELE
Trigger: TTCAAGTTCGCAGGGACGTCACGTCCGCACTTGAAC...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCAGGTGAGGAGGTCATaGTCCCCTTCTGGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLQVRRS*SPSGAP
Trigger: GGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGGCACTGCCCACAGGTaGGGAGGTCATGATCCCCTT +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLGTAHR*GGHDPL
Trigger: AAGGGGATCATGACCTCCTCACCTGTGGGCAGTGCC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp CTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTATTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: LSSHNGFLEATVRKHHKLFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...TAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TGGGGGCTTCAAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAATTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: WGLQIFSELKGSRASIRKFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...TTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GAAAGTGTTCTCCTGGACGGTTCTGCACAGAATTCATTCACAGAGCATGTCTTGTTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: ESVLLDGSAQNSFTEHVLFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...CAAGACATGCTCTGTGAATGAATTCTGTGCAGAACCGTCCAGGAGAACACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR TCA 90 bp CAATTATTTGGCTATCTTTTCACTAAGCTAGGTAATCTAGCCAGAAGGTGGATACGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: QLFGYLFTKLGNLARRWIRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...TATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR TCA 90 bp CTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGAAACCATGCACTGGTaGATGGCTGTTTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LSSHNGFLEATVRKHHKLETMHW*MAVCKL
Trigger: CAACTTGCAAACAGCCATTCACCAGTGCATGGTTTC...TAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GGCTTCAAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCGAAACCATGCACTGGTaGATGGCTGTTTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: GFKFSQNLRALELPSENCETMHW*MAVCKL
Trigger: CAACTTGCAAACAGCCATTCACCAGTGCATGGTTTC...GCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR TCA 90 bp TGGGGGCTTCAAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAAGAAACCATGCACTGGTaGATGGCTGTTTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: WGLQIFSELKGSRASIRKETMHW*MAVCKL
Trigger: CAACTTGCAAACAGCCATTCACCAGTGCATGGTTTC...TTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR TCA 90 bp GTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCTTATTGTCTGCAATATaGATCCCATGGAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VFAQRLLGGYCQKTSQTSLLSAI*IPWRGG
Trigger: GCCACCTCTCCATGGGATTCATATTGCAGACAATAA...GCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR TCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCGGTGGGGGTCCAAGTaGTGTCTCGGTGGTGGACTA +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLRWGSK*CLGGGL
Trigger: TAGTCCACCACCGAGACATCACTTGGACCCCCACCG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGACCGTCGTCGGACTTaGCCGTCATGGGGGACGATT +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLDRRRT*PSWGTI
Trigger: AATCGTCCCCCATGACGGTCAAGTCCGACGACGGTC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAGGTCGTTCTCGCTCTTaGACTTGGCCACCACGGACT +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQGRSRS*TWPPRT
Trigger: AGTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACC...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGCAGCACACAGGTGTCTaGGCTCTATTATTGACAAAC +
Preference number: 4 (lower is better)
Translates to: TIQVIRLAGFRRARASLMQHTGV*ALLLTN
Trigger: GTTTGTCAATAATAGAGCTCAGACACCTGTGTGCTG...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR TCA 90 bp TTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTCCGAATGGGGGTGTGTaGAGAACCTCTATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FSQNLRALELPSENCHTSPNGGV*RTSIQF
Trigger: AAACTGAATAGAGGTTCTTCACACACCCCCATTCGG...AGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000479026.2
CDS-3UTR TCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTGCTGACAGGCCAGCCTaGTGTGCACCGAATGTACAT +
Preference number: 4 (lower is better)
Translates to: DLQAFQLLVWRRILCLNAADRPA*CAPNVH
Trigger: ATGTACATTCGGTGCACATCAGGCTGGCCTGTCAGC...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CAAGTACGTGTCTGTGCTGACTTGTTAAGCAATCCACTTGTATGTAGAATAAGATTCTACTGGGGCATCTaGGGAGGAGAGCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: QVRVCADLLSNPLVCRIRFYWGI*GGEPLR
Trigger: CCTCAGTGGCTCTCCTCCTCAGATGCCCCAGTAGAA...TCTTATTCTACATACAAGTGGATTGCTTAACAAGTCAGCACAGACACGTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp ATGTCACATAAGGTAAATGTGGTGGATTCAAGAAATACACTCCACAAATGCAGCCAGCCCCATCCGGGCTaGCAGCCAATATGGATCCAA +
Preference number: 4 (lower is better)
Translates to: MSHKVNVVDSRNTLHKCSQPHPG*QPIWIQ
Trigger: TTGGATCCATATTGGCTGTCAGCCCGGATGGGGCTG...GCTGCATTTGTGGAGTGTATTTCTTGAATCCACCACATTTACCTTATGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp GATTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTCACAGAATCTGCATTaGCTTTTGTCTAACATGCTC +
Preference number: 4 (lower is better)
Translates to: DLARLWISEDDKSPSACSSQNLH*LLSNML
Trigger: GAGCATGTTAGACAAAAGTCAATGCAGATTCTGTGA...AGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp CAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCAGTTTTAATTCTTGCTTaGCAGACACTGTGTTTTGTC +
Preference number: 4 (lower is better)
Translates to: QGFGSPKTTNPLPPALASVLILA*QTLCFV
Trigger: GACAAAACACAGTGTCTGTCAAGCAAGAATTAAAAC...TGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp TTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTCTCACTTTGAGATGTaGCCACACTATTTATGTTCA +
Preference number: 4 (lower is better)
Translates to: LARLWISEDDKSPSACSCSHFEM*PHYLCS
Trigger: TGAACATAAATAGTGTGGTCACATCTCAAAGTGAGA...GCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAAGCTGCAAGTTCAAGTaGGGACGTGACGTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQSCKFK*GRDVPA
Trigger: CGCAGGGACGTCACGTCCGCACTTGAACTTGCAGCT...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGGGGTTTGCCTTGCTTaGGGCGAGACATGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLGVCLA*GETWWA
Trigger: AGCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp AATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTTTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: NLFLLPTRWVSVGNRYRSFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...ACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCTCCATGAGTGTTCTGTaGGTGTTGCAAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: GWGLMRISTIQVIRLAGFSMSVL*VLQEKP
Trigger: TGGTTTCTCTTGCAACACGCACAGAACACTCATGGA...GAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCTCCATGAGTGTTCTGTaGGTGTTGCAAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: VFAQRLLGGYCQKTSQTSSMSVL*VLQEKP
Trigger: TGGTTTCTCTTGCAACACGCACAGAACACTCATGGA...GCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp TCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATCCATGAGTGTTCTGTaGGTGTTGCAAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: SHNGFLEATVRKHHKLAGSMSVL*VLQEKP
Trigger: TGGTTTCTCTTGCAACACGCACAGAACACTCATGGA...TCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTGGAAAGCGCCCTTCTaGCAGGCCGGAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLWKAPF*QAGSLS
Trigger: AGAGAGGCTTCCGGCCTGGCAGAAGGGCGCTTTCCA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAGGTTGCAGTAACCTTTaGATAGGGCTGGGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKGCSNL*IGLGRP
Trigger: AGGCCGGCCCAGCCCTATGCAAAGGTTACTGCAACC...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACACCAGGAAGGGCGGCTTaGTACCTGGCTGGAATGGTT +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTPGRAA*YLAGMV
Trigger: AACCATTCCAGCCAGGTAGCAAGCCGCCCTTCCTGG...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAACCAGGAAGGGCGGCTTaGTACCTGGCTGGAATGGTT +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKPGRAA*YLAGMV
Trigger: AACCATTCCAGCCAGGTAGCAAGCCGCCCTTCCTGG...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACACCGTTCTCCGAGGAGTaGTCCGACGAGGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTPFSEE*SDEEAK
Trigger: TTTTGCCTCCTCGTCGGAGCACTCCTCGGAGAACGG...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTATTCCCCACCTGGCCATaGGTTTTCATGTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVFPTWP*VFMCLV
Trigger: CACCAGGCACATGAAAACGCATGGCCAGGTGGGGAA...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCTGCGGGGCATATTCTaGACTCATCCCAGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLLRGIF*THPRRG
Trigger: CCCACGCCTGGGATGAGTGCAGAATATGCCCCGCAG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642384.2
CDS-3UTR GCA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGTCTTTACAAATACCCTaGGGGGCATATTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: TIQVIRLAGFRRARASLMSLQIP*GAYSAL
Trigger: GAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGA...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR GCA 90 bp ATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCTCCTTGAAAATTTATaGCATCTGATAAGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: IRLAGFRRARASLMTAMVLLENL*HLISGN
Trigger: GTTACCGCTTATCAGATGGCATAAATTTTCAAGGAG...GACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCCTTCAGTTCCCTGTCTaGAAACTTCTAATTCGCCAG +
Preference number: 4 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSLQFPV*KLLIRQ
Trigger: CTGGCGAATTAGAAGTTTGCAGACAGGGAACTGAAG...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTTCCAACAACAATGCCTaGTGTCAGCAGCTGAATTAT +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADISNNNA*CQQLNY
Trigger: ATAATTCAGCTGCTGACAGCAGGCATTGTTGTTGGA...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp GCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGAGAAGTTTATCATGTTaGCCAGGCTGGGTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: AQRLLGGYCQKTSQTSRMRSLSC*PGWVES
Trigger: ACTTTCCACCCAGCCTGGGCAACATGATAAACTTCT...CATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS-3UTR GCA 90 bp CTGGGCCAGAAAGAATTTTTACCACCTGTTTGTAGATGTAACTTATTTGTGGCAAAAATAGAGCGAGAGTaGACCGGGAGGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LGQKEFLPPVCRCNLFVAKIERE*TGRLQP
Trigger: GGGCTGCAGCCTCCCGGTGCACTCTCGCTCTATTTT...TGCCACAAATAAGTTACATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: DLQAFQLLVWRRILCLNAAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCTCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAACCATGCACTGGTGAATaGCTGTTTGCAAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: DSVFAQRLLGGYCQKTSQPCTGE*LFASCT
Trigger: TGTACAACTTGCAAACAGCCATTCACCAGTGCATGG...TTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAACCCGGACCACTAATATaGGGCGTGCTCCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQPGPLI*GVLPPL
Trigger: AAGTGGAGGGAGCACGCCCCATATTAGTGGTCCGGG...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAACGTCCTTCCCCACCTaGCCATGCGTTTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVTSFPT*PCVFMC
Trigger: GCACATGAAAACGCATGGCCAGGTGGGGAAGGACGT...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCAAATCCTACAGGGAGTaGGGCTGGAGGGCGATGGGG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLKSYRE*GWRAMG
Trigger: CCCCATCGCCCTCCAGCCCCACTCCCTGTAGGATTT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCAAATCCTACAGGGAGTaGGGCTGGAGGGCGATGGGG +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLKSYRE*GWRAMG
Trigger: CCCCATCGCCCTCCAGCCCCACTCCCTGTAGGATTT...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTACACTCATCCCAGGCGTaGGGATTAGAGCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVHSSQA*GLELHV
Trigger: CACATGGAGCTCTAATCCCCACGCCTGGGATGAGTG...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642384.2
CDS-3UTR CCA 90 bp AACATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACTCCTACCCACCCGATaGGTGTCTGTAGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: NIECIETRGWGLMRISTILLPTR*VSVGNR
Trigger: CCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAG...TATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp AGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTTCACAAGACAACACATaGAAATGGTCATTCCCACAT +
Preference number: 4 (lower is better)
Translates to: RLWISEDDKSPSACSCFISQDNT*KWSFPH
Trigger: ATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGA...AATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR CCA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCAGGAGTTTTTAATCAGTaGATTCGCCTCTATCTAAAA +
Preference number: 4 (lower is better)
Translates to: WCIRQSCTARCLRGATCAGVFNQ*IRLYLK
Trigger: TTTTAGATAGAGGCGAATCCACTGATTAAAAACTCC...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCGCAGGGGAGTTAAAATaGGGAGTAAATGGTTCACTG +
Preference number: 4 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSAGELK*GVNGSL
Trigger: CAGTGAACCATTTACTCCCCATTTTAACTCCCCTGC...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAATCTTACCGGAAATGTaGATGTTATCAAGGAAATCG +
Preference number: 4 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTILPEM*MLSRKS
Trigger: CGATTTCCTTGATAACATCCACATTTCCGGTAAGAT...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACAACAATTCGCAATTACTaGAAGGACCTAATGGTCATT +
Preference number: 4 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTTIRNY*KDLMVI
Trigger: AATGACCATTAGGTCCTTCCAGTAATTGCGAATTGT...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp AAATCAGTCCCCAAGTCCACATCTTCCAGCTCCAACCACCACAGCTCACAGTCACCCAGTGTTCAGAACTaGAATTCATTTGTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KSVPKSTSSSSNHHSSQSPSVQN*NSFVLE
Trigger: TTCCAAGACAAATGAATTCCAGTTCTGAACACTGGG...TGACTGTGAGCTGTGGTGGTTGGAGCTGGAAGATGTGGACTTGGGGACTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp GAAAGTGTTCTCCTGGACGGTTCTGCACAGAATTCATTCACAGAGCATGTCTTGATCTGGGTCATGTTTTaGAGGATCCCTTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: ESVLLDGSAQNSFTEHVLIWVMF*RIPSSE
Trigger: CTCACTGGAAGGGATCCTCCAAAACATGACCCAGAT...CAAGACATGCTCTGTGAATGAATTCTGTGCAGAACCGTCCAGGAGAACACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp ATCAGTCCCCAAGTCCACATCTTCCAGCTCCAACCACCACAGCTCACAGTCATTATACTTCTTTCCATCTaGGTCATGTTTTGGAGGATC +
Preference number: 4 (lower is better)
Translates to: ISPQVHIFQLQPPQLTVIILLSI*VMFWRI
Trigger: GATCCTCCAAAACATGACCCAGATGGAAAGAAGTAT...AATGACTGTGAGCTGTGGTGGTTGGAGCTGGAAGATGTGGACTTGGGGACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp AGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTAGTCAAACAAGTCATTaGCTGAACTGCAAATGCCTA +
Preference number: 4 (lower is better)
Translates to: RLWISEDDKSPSACSCFISQTSH*LNCKCL
Trigger: TAGGCATTTGCAGTTCAGCCAATGACTTGTTTGACT...AATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp ATTTTCCTTCCAGTCACAAGACAACACATGGAAATGGTCATTCCCACATCCTGCCAGCCAGTTCCAGGGTaGGAACAGGTGATTAAACAC +
Preference number: 4 (lower is better)
Translates to: IFLPVTRQHMEMVIPTSCQPVPG*EQVIKH
Trigger: GTGTTTAATCACCTGTTCCCACCCTGGAACTGGCTG...GCAGGATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGACTGGAAGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CAA 72 bp AAAAGCTTCAGAGAATCACACTCTCTAAAAAGGGCCTaGTGTAAAGCCACCTTGCATGTCAGCCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: KSFRESHSLKRA*CKATLHVSPSS
Trigger: GGAGCTTGGGCTGACATGCAAGGTGGCTTTACACAAGGCCCTTTTTAGAGAGTGTGATTCTCTGAAGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR TCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAACGTCCCTGCGAACTTaGACGTCAGGAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTTSLRT*TSGVWM
Trigger: CATCCAGACTCCTGACGTTCAAGTTCGCAGGGACGT...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAATGGCGCAGGGAAGATaGATTGTGGGAGAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKMAQGR*IVGEPS
Trigger: TGACGGCTCTCCCACAATTCATCTTCCCTGCGCCAT...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp CACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATTATCGTCATCCTCTGGCGTaGCCTGGATGCCAACCTCCA +
Preference number: 4 (lower is better)
Translates to: HQKHIFEKQDSACHIMHYRHPLA*PGCQPP
Trigger: TGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACG...ATAATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR TCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGGTCGTTCTCGCTCTTaGACTTGGCCACCACGGACT +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLGRSRS*TWPPRT
Trigger: AGTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTATTTTCATGTGCCTGGTaGGCTTGCTACTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVFSCAW*ACYSGH
Trigger: GTGCCCAGAGTAGCAAGCTCACCAGGCACATGAAAA...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp TGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGACAGCACACAGGTGTCTaGGCTCTATTATTGACAAAC +
Preference number: 4 (lower is better)
Translates to: WGLMRISTIQVIRLAGFRQHTGV*ALLLTN
Trigger: GTTTGTCAATAATAGAGCTCAGACACCTGTGTGCTG...TCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR TCA 90 bp TTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGTTACTCCATATTTGGTaGTTTAGCAAGGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: FSKALDLRRRQIPFRLLLLLHIW*FSKALD
Trigger: ATCCAAAGCCTTGCTAAATCACCAAATATGGAGTAA...CAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR TCA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCATGAGTAGAGTTCAATaGGGGTTGATATGGGATGTG +
Preference number: 4 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSMSRVQ*GLIWDV
Trigger: CACATCCCATATCAACCCTCATTGAACTCTACTCAT...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCTCAGGTACTACCCCCTaGTTTCTTAACTCTCTTATC +
Preference number: 4 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSSGTTP*FLNSLI
Trigger: GATAAGAGAGTTAAGAAATCAGGGGGTAGTACCTGA...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp AGACTTGGAATTGTGCAGACGTGCTTTAGAGAAATGGGCTGGGGGTACACACACCGTGATTCTAGTTACTaGCATCTCACTTTGAGATGT +
Preference number: 4 (lower is better)
Translates to: RLGIVQTCFREMGWGYTHRDSSY*HLTLRC
Trigger: ACATCTCAAAGTGAGATGTCAGTAACTAGAATCACG...GTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACGTCTGCACAATTCCAAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCAGCTGCAAGTTCAAGTaGGGACGTGACGTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLSCKFK*GRDVPA
Trigger: CGCAGGGACGTCACGTCCGCACTTGAACTTGCAGCT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTGCTGGGGTTTGCCTTaGTTGCGGCGAGACATGGTG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLCWGLP*LRRDMV
Trigger: CACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACAGACTTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: RLLGGYCQKTSQTSRMTDFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...GTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: LCLRTTASWRLLSENITNFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp TGGGGGCTTCAAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAATCCATGAGTGTTCTGTaGGTGTTGCAAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: WGLQIFSELKGSRASIRKSMSVL*VLQEKP
Trigger: TGGTTTCTCTTGCAACACGCACAGAACACTCATGGA...TTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR GCA 90 bp AACATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATAGCTAGACGTGTTCCCTaGCAGCTCTCTAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: NIECIETRGWGLMRISTIARRVP*QLSKSP
Trigger: AGGAGACTTAGAGAGCTGGCAGGGAACACGTCTAGC...TATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGCCTCGCTGAAGTGCTaGATGGAGCTGAGCACCATG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLASLKC*MELSTM
Trigger: CATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGCCTCGCTGAAGTGCTaGATGGAGCTGAGCACCATG +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLASLKC*MELSTM
Trigger: CATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCAAGGCCTCGCTGAAGTaGTGCATGGAGCTGAGCACC +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLKASLK*CMELST
Trigger: GGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAACTCACAAGTGTCGCTaGGTCTGCCCTCTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVTHKCR*VCPLLS
Trigger: GCTCAAAAGAGGGCAGACGCAGCGACACTTGTGAGT...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACATTCCCCACCTGGCCATaGGTTTTCATGTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTFPTWP*VFMCLV
Trigger: CACCAGGCACATGAAAACGCATGGCCAGGTGGGGAA...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAAACAGGATTCGGCGTaGCATATTATGCATTATTTA +
Preference number: 4 (lower is better)
Translates to: DSAGLCLRTTASWRLLSEKQDSA*HIMHYL
Trigger: TAAATAATGCATAATATGGCACGCCGAATCCTGTTT...TTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR GCA 90 bp ACCACTGACCTATTATGGTTCAACTTTGTGGTCAAACTAGGTCGGAGAGACAAGTGGCTGAACTGCAAATaGCTATATGGCCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: TTDLLWFNFVVKLGRRDKWLNCK*LYGHFA
Trigger: GGCAAAGTGGCCATATAGGCATTTGCAGTTCAGCCA...CTTGTCTCTCCGACCTAGTTTGACCACAAAGTTGAACCATAATAGGTCAGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp CTTAAAGTCAAGGTCATGGTGTCATCCCACCACGGGGCTGTGTTTAATTACAGCGCAGACTTGGAATTGTaGAGACGTGCTTTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LKVKVMVSSHHGAVFNYSADLEL*RRALEK
Trigger: TTTCTCTAAAGCACGTCTGCACAATTCCAAGTCTGC...GCTGTAATTAAACACAGCCCCGTGGTGGGATGACACCATGACCTTGACTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp ATTTTCCTTCCAGTCACAAGACAACACATGGAAATGGTCATTCCCACATCCTGCCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: IFLPVTRQHMEMVIPTSCQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...GCAGGATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGACTGGAAGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GAAACAGGTACAGAAGTACAAAATCATAAGCAGCCTCATTGTCTTATAAGCATTGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: ETGTEVQNHKQPHCLISIVMIPF*SSQRAV
Trigger: CACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGAC...AATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR CCA 90 bp TTTAGACAACCAGGGAGTTCAAGCAAATATCTCTTATTTCCCTACATAGATTCATCCTCTGGCGTGACCTaGATGCCAACCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: FRQPGSSSKYLLFPYIDSSSGVT*MPTSTG
Trigger: TCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGA...TGAATCTATGTAGGGAAATAAGAGATATTTGCTTGAACTCCCTGGTTGTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAAATCCCATGGAGAGGTaGCTGGGAAGGACATTCTGC +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVNPMER*LGRTFC
Trigger: GCAGAATGTCCTTCCCAGCCACCTCTCCATGGGATT...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCCCGGACCACTAATATaGGGCGTGCTCCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLPGPLI*GVLPPL
Trigger: AAGTGGAGGGAGCACGCCCCATATTAGTGGTCCGGG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAACGTCCTTCCCCACCTaGCCATGCGTTTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTTSFPT*PCVFMC
Trigger: GCACATGAAAACGCATGGCCAGGTGGGGAAGGACGT...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGTACATGTGTAGCTGCTaGGCTCATCTTTACAAATAC +
Preference number: 4 (lower is better)
Translates to: PFLKSVPPTHPMGVCRKQYMCSC*AHLYKY
Trigger: GTATTTGTAAAGATGAGCCCAGCAGCTACACATGTA...CTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR CCA 90 bp GAAACAGGTACAGAAGTACAAAATCATAAGCAGCCTCATTGTCTTATAAGCATTGCTGCAGGCCTAGGCTaGAAGGACTCTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: ETGTEVQNHKQPHCLISIAAGLG*KDSAGL
Trigger: GAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGC...AATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CTTCAAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCAATAGAAACAAGGGGTTaGGGACTCATGCGCATTTCC +
Preference number: 4 (lower is better)
Translates to: LQIFSELKGSRASIRKLPIETRG*GLMRIS
Trigger: GGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTAT...TGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479026.2
ENST00000647472.1
CDS-3UTR CCA 90 bp CTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAAATCTAGCCAGAAGGTaGATAGGTAGGATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LSSHNGFLEATVRKHHKLNLARR*IGRIFP
Trigger: GGGGAAAATCCTACCTATCCACCTTCTGGCTAGATT...TAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CCA 90 bp TGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAATCTAGCCAGAAGGTaGATAGGTAGGATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: WGLMRISTIQVIRLAGFRNLARR*IGRIFP
Trigger: GGGGAAAATCCTACCTATCCACCTTCTGGCTAGATT...TCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CCA 90 bp ATTTTCCTTCCAGTCACAAGACAACACATGGAAATGGTCATTCCCACATCCTGCCACCAAGGCTGGAAATaGACAATGGAAGCTGGACTA +
Preference number: 4 (lower is better)
Translates to: IFLPVTRQHMEMVIPTSCHQGWK*TMEAGL
Trigger: TAGTCCAGCTTCCATTGTCCATTTCCAGCCTTGGTG...GCAGGATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGACTGGAAGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp ACCACTGACCTATTATGGTTCAACTTTGTGGTCAAACTAGGTCGGAGAGACAAGATCCACCAACAGGCATaGCATGTCTGTCATCACAGA +
Preference number: 4 (lower is better)
Translates to: TTDLLWFNFVVKLGRRDKIHQQA*HVCHHR
Trigger: TCTGTGATGACAGACATGCCATGCCTGTTGGTGGAT...CTTGTCTCTCCGACCTAGTTTGACCACAAAGTTGAACCATAATAGGTCAGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CAA 72 bp TACCTCACCTGGGTCACAGCACTTGTTGTGCGCCCATaGAATATCTTAGACATCTTAGAGAGCTTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: YLTWVTALVVRP*NILDILESFSS
Trigger: AGACGAAAAGCTCTCTAAGATGTCTAAGATATTCAATGGGCGCACAACAAGTGCTGTGACCCAGGTGAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCACGTCCCTGCGAACTTaGACGTCAGGAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLTSLRT*TSGVWM
Trigger: CATCCAGACTCCTGACGTTCAAGTTCGCAGGGACGT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGTTCAAGTGCGGACGTaGCGTCCCTGCGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLVQVRT*RPCELE
Trigger: TTCAAGTTCGCAGGGACGTCACGTCCGCACTTGAAC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCATGGCGCAGGGAAGATaGATTGTGGGAGAGCCGTCA +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLMAQGR*IVGEPS
Trigger: TGACGGCTCTCCCACAATTCATCTTCCCTGCGCCAT...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTCCACAACCATCTGTATaGGCCACAGGTCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: VYLELVKENTSGLVLLVFPQPSV*ATGPQS
Trigger: GGACTGTGGACCTGTGGCTCATACAGATGGTTGTGG...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTCACAGCCAACGCGACTaGAGCAGCATGCATAAGTTA +
Preference number: 4 (lower is better)
Translates to: DLQAFQLLVWRRILCLNAHSQRD*SSMHKL
Trigger: TAACTTATGCATGCTGCTTCAGTCGCGTTGGCTGTG...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCAACTCCTGGATAGACTaGATAATAAGGCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSNSWID*IIRLVM
Trigger: CATCACAAGCCTTATTATTCAGTCTATCCAGGAGTT...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp AACATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATAGCGAGAATTCCCGTTTaGTTAAGTGCTGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: NIECIETRGWGLMRISTIARIPV*LSAGVC
Trigger: GCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGC...TATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR GCA 90 bp TGGGGGCTTCAAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAATTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: WGLQIFSELKGSRASIRKFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...TTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTGAAGCCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAATGGGGGACGATTTGTaGATGTGCGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVMGDDL*MCVFMW
Trigger: CCACATGAAGACGCACATGCACAAATCGTCCCCCAT...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GATTTTCCCCACTTAGGTTCACGGCCTGTATGTGAATCTACAGCACACAGGTGTTTGTACATGTGTAGCTaGTGGGCTCATCTTTACAAA +
Preference number: 4 (lower is better)
Translates to: DFPHLGSRPVCESTAHRCLYMCS*WAHLYK
Trigger: TTTGTAAAGATGAGCCCAGCAGCTACACATGTACAA...ACACCTGTGTGCTGTAGATTCACATACAGGCCGTGAACCTAAGTGGGGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000359629.10
CDS-3UTR GCA 90 bp TTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAACTGAGAAAAGTTCTGTaGAAATTAACTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: FLLPTRWVSVGNRYRSTKLRKVL*KLTGPE
Trigger: TTCTGGCCCAGTTAATTTGCACAGAACTTTTCTCAG...TTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR GCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTCTTCATCAACATACCTaGTCCAGGTTCCCACTGGGA +
Preference number: 4 (lower is better)
Translates to: DLQAFQLLVWRRILCLNALHQHT*SRFPLG
Trigger: TCCCAGTGGGAACCTGGAGCAGGTATGTTGATGAAG...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCGCACATAGTGCTTTGTaGTCCAACATAAGAATCCAA +
Preference number: 4 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSAHSAL*SNIRIQ
Trigger: TTGGATTCTTATGTTGGAGCACAAAGCACTATGTGC...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTGATAGGATGCAGAGCTaGATGGAACCCACATCCACA +
Preference number: 4 (lower is better)
Translates to: DLQAFQLLVWRRILCLNADRMQS*MEPTST
Trigger: TGTGGATGTGGGTTCCATGCAGCTCTGCATCCTATC...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTAGTCTGCCCACACCATaGATATTCATAAAGCAATTT +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADISLPTP*IFIKQF
Trigger: AAATTGCTTTATGAATATGCATGGTGTGGGCAGACT...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp AGCTTCAGAGAATCACACTCTCTAAAAAGGGCCTTGTGTAAAGCCACCTTGCATTCTCCTGGACGGTTCTaGACAGAATTCATTCACAGA +
Preference number: 4 (lower is better)
Translates to: SFRESHSLKRALCKATLHSPGRF*TEFIHR
Trigger: TCTGTGAATGAATTCTGTGCAGAACCGTCCAGGAGA...ATGCAAGGTGGCTTTACACAAGGCCCTTTTTAGAGAGTGTGATTCTCTGAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR GCA 90 bp GGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTATGTCATCACAGAATCTaGATTGACTTTTGTCTAACA +
Preference number: 4 (lower is better)
Translates to: GFGSPKTTNPLPPALASLCHHRI*IDFCLT
Trigger: TGTTAGACAAAAGTCAATGCAGATTCTGTGATGACA...TAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp CAAGTACGTGTCTGTGCTGACTTGTTAAGCAATCCACTTGTATGTAGAATAAGAACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: QVRVCADLLSNPLVCRIRTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...TCTTATTCTACATACAAGTGGATTGCTTAACAAGTCAGCACAGACACGTACTTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GCCACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATTAATCCCATGGAGAGGTaGCTGGGAAGGACATTCTGC +
Preference number: 4 (lower is better)
Translates to: ATKSIYLKNRIRRAILCINPMER*LGRTFC
Trigger: GCAGAATGTCCTTCCCAGCCACCTCTCCATGGGATT...AATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAAATCCCATGGAGAGGTaGCTGGGAAGGACATTCTGC +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQNPMER*LGRTFC
Trigger: GCAGAATGTCCTTCCCAGCCACCTCTCCATGGGATT...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAAGGCTCCATAGCCATTaGATTCAACCGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKRLHSH*IQPQHP
Trigger: AGGGTGCTGCGGTTGAATCCAATGGCTATGGAGCCT...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GTAGCCACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCGGCTTGCTACCTGGCTaGAATGGTTGCAGTAACCTT +
Preference number: 4 (lower is better)
Translates to: VATKSIYLKNRIRRAILCGLLPG*NGCSNL
Trigger: AAGGTTACTGCAACCATTCCAGCCAGGTAGCAAGCC...GCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CCA 90 bp ATTTTGATTCTCCTTGAAAATTTATGCCATCTGATAAGCGGTAACCTAGTTCCCCACTCATCCCAGGCGTaGGGATTAGAGCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: ILILLENLCHLISGNLVPHSSQA*GLELHV
Trigger: CACATGGAGCTCTAATCCCCACGCCTGGGATGAGTG...GGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR CCA 90 bp GCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCTCTGTGCAAATTAACTaGGCCAGAAAGAATTTTTAC +
Preference number: 4 (lower is better)
Translates to: AGLCLRTTASWRLLSENISVQIN*ARKNFY
Trigger: GTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAGA...GATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGAGAGAGGAGCAAGGTCTaGTTTACTTCTGAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LLELILPEMWMLSRKSERERSKV*FTSEEC
Trigger: GCACTCCTCAGAAGTAAACCAGACCTTGCTCCTCTC...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTGGAGCCCAGGGAGCCTaGAGACCAGGATATACTTTG +
Preference number: 4 (lower is better)
Translates to: VYLELVKENTSGLVLLVFGAQGA*RPGYTL
Trigger: CAAAGTATATCCTGGTCTCCAGGCTCCCTGGGCTCC...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTGAGAGATTTATACACTaGCTTCCATATGTCACAAAG +
Preference number: 4 (lower is better)
Translates to: HQPHLIHGERVMQTSADIERFIH*LPYVTK
Trigger: CTTTGTGACATATGGAAGCCAGTGTATAAATCTCTC...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp GAAAGTGTTCTCCTGGACGGTTCTGCACAGAATTCATTCACAGAGCATGTCTTGAAGAAAGTGTTCTCCTaGACGGTTCTGCACAGAATT +
Preference number: 4 (lower is better)
Translates to: ESVLLDGSAQNSFTEHVLKKVFS*TVLHRI
Trigger: AATTCTGTGCAGAACCGTCCAGGAGAACACTTTCTT...CAAGACATGCTCTGTGAATGAATTCTGTGCAGAACCGTCCAGGAGAACACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp AGACTTGGAATTGTGCAGACGTGCTTTAGAGAAATGGGCTGGGGGTACACACACACCACTGACCTATTATaGTTCAACTTTGTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: RLGIVQTCFREMGWGYTHTTDLL*FNFVVK
Trigger: TTTGACCACAAAGTTGAACCATAATAGGTCAGTGGT...GTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACGTCTGCACAATTCCAAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CAA 72 bp ACCCCAGTTATTAGAGAGTATCGTGGGAACCTGGATTaGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: TPVIREYRGNLD*QAFQLLVWRRI
Trigger: GATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATCCAGGTTCCCACGATACTCTCTAATAACTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTTTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: DLQAFQLLVWRRILCLNAFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp AACATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATAGAAACCATGCACTGGTaGATGGCTGTTTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: NIECIETRGWGLMRISTIETMHW*MAVCKL
Trigger: CAACTTGCAAACAGCCATTCACCAGTGCATGGTTTC...TATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp CTCCAACAGAACAGATTAACACGAGTCCCTCCACCCTTCCAAAAAGCCTTTTCCTGTGGGGATTTCATTTaGACTGCTATCGAAGAATAT +
Preference number: 4 (lower is better)
Translates to: LQQNRLTRVPPPFQKAFSCGDFI*TAIEEY
Trigger: ATATTCTTCGATAGCAGTTCAAATGAAATCCCCACA...GGAAAAGGCTTTTTGGAAGGGTGGAGGGACTCGTGTTAATCTGTTCTGTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTGCATTTAATCCATGGTaGACGGGTCATGCAGACATC +
Preference number: 4 (lower is better)
Translates to: DLQAFQLLVWRRILCLNAAFNPW*TGHADI
Trigger: GATGTCTGCATGACCCGTTCACCATGGATTAAATGC...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGAAGTCTTCTCCCCAAATaGGAACGATTTCCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LLELILPEMWMLSRKSERSLLPK*ERFPAN
Trigger: GTTGGCTGGAAATCGTTCTCATTTGGGGAGAAGACT...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp ATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAACATGTGTGTGTCTGTaGACATTTATGACTTATGTG +
Preference number: 4 (lower is better)
Translates to: IQVIRLAGFRRARASLMTTCVCL*TFMTYV
Trigger: CACATAAGTCATAAATGTTCACAGACACACACATGT...TGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR TCA 90 bp ATTTTCCTTCCAGTCACAAGACAACACATGGAAATGGTCATTCCCACATCCTGCACCTCAAATCTGACATaGTGGGATAATGTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: IFLPVTRQHMEMVIPTSCTSNLT*WDNVWV
Trigger: GACCCAAACATTATCCCATCATGTCAGATTTGAGGT...GCAGGATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGACTGGAAGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAATCCCGTTTGCTTAAGTaGTGGGGTTTGCCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQSRLLK*WGLPCL
Trigger: CAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGA...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAGCGAGAATTCCCGTTTaGTTAAGTGCTGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKARIPV*LSAGVC
Trigger: GCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGC...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGCTAGACGTGTTCCCTaGCAGCTCTCTAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLARRVP*QLSKSP
Trigger: AGGAGACTTAGAGAGCTGGCAGGGAACACGTCTAGC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGCTAGACGTGTTCCCTaGCAGCTCTCTAAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLARRVP*QLSKSP
Trigger: AGGAGACTTAGAGAGCTGGCAGGGAACACGTCTAGC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAACCTGGCTGGAATGGTTaGAGTAACCTTTGCATAGGG +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQPGWNG*SNLCIG
Trigger: CCCTATGCAAAGGTTACTGCAACCATTCCAGCCAGG...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAATGGGGGACGATTTGTaGATGTGCGTCTTCATGTGG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTMGDDL*MCVFMW
Trigger: CCACATGAAGACGCACATGCACAAATCGTCCCCCAT...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCACTCACAAGTGTCGCTaGGTCTGCCCTCTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLTHKCR*VCPLLS
Trigger: GCTCAAAAGAGGGCAGACGCAGCGACACTTGTGAGT...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTATTGTACATGTGTAGCTaGTGGGCTCATCTTTACAAA +
Preference number: 4 (lower is better)
Translates to: LSSHNGFLEATVRKHHKLLYMCS*WAHLYK
Trigger: TTTGTAAAGATGAGCCCAGCAGCTACACATGTACAA...TAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR GCA 90 bp GTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCCTCCTTGAAAATTTATaGCATCTGATAAGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: VFAQRLLGGYCQKTSQTSLLENL*HLISGN
Trigger: GTTACCGCTTATCAGATGGCATAAATTTTCAAGGAG...GCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp TTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAACTCCTTGAAAATTTATaGCATCTGATAAGCGGTAAC +
Preference number: 4 (lower is better)
Translates to: FLLPTRWVSVGNRYRSTKLLENL*HLISGN
Trigger: GTTACCGCTTATCAGATGGCATAAATTTTCAAGGAG...TTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR GCA 90 bp ATTTTCCTTCCAGTCACAAGACAACACATGGAAATGGTCATTCCCACATCCTGCAAATCCCCTTCCGCCTaGTCTTGCTTCATTAATCAT +
Preference number: 4 (lower is better)
Translates to: IFLPVTRQHMEMVIPTSCKSPSA*SCFINH
Trigger: ATGATTAATGAAGCAAGAGCAGGCGGAAGGGGATTT...GCAGGATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGACTGGAAGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp CAAGTACGTGTCTGTGCTGACTTGTTAAGCAATCCACTTGTATGTAGAATAAGATGCATACGTCAATCGTaGACTGCGCGTTGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: QVRVCADLLSNPLVCRIRCIRQS*TARCLR
Trigger: TCTAAGGCAACGCGCAGTGCACGATTGACGTATGCA...TCTTATTCTACATACAAGTGGATTGCTTAACAAGTCAGCACAGACACGTACTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CAAGTACGTGTCTGTGCTGACTTGTTAAGCAATCCACTTGTATGTAGAATAAGACAGGTCCAACAACAATaGCTGCTGTCAGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: QVRVCADLLSNPLVCRIRQVQQQ*LLSAAE
Trigger: TTCAGCTGCTGACAGCAGGCATTGTTGTTGGACCTG...TCTTATTCTACATACAAGTGGATTGCTTAACAAGTCAGCACAGACACGTACTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAAGGGAAGATGAATTGTaGGAGAGCCGTCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVREDEL*ESRHGF
Trigger: AAAGCCATGACGGCTCTCCCACAATTCATCTTCCCT...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGGAAATAATACAAAGATaGCGCAGGGAAGATGAATTG +
Preference number: 4 (lower is better)
Translates to: TIQVIRLAGFRRARASLMEIIQR*RREDEL
Trigger: CAATTCATCTTCCCTGCGCCATCTTTGTATTATTTC...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCCGTTTGCTTAAGTGCTaGGGTTTGCCTTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLRLLKC*GLPCLR
Trigger: CCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACG...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCGTTTGCTTAAGTGCTaGGGTTTGCCTTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLRLLKC*GLPCLR
Trigger: CCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTACAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATTATGCTCCCAACGGGCCGTaGTCTGGTTCATCATCTGTA +
Preference number: 4 (lower is better)
Translates to: HQKHIFEKQDSACHIMHYAPNGP*SGSSSV
Trigger: TACAGATGATGAACCAGACCACGGCCCGTTGGGAGC...ATAATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp ATTTTGATTCTCCTTGAAAATTTATGCCATCTGATAAGCGGTAACCTAGTTCCCACAATCGTCATCCTCTaGCGTGACCTGGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: ILILLENLCHLISGNLVPTIVIL*RDLDAN
Trigger: GTTGGCATCCAGGTCACGCCAGAGGATGACGATTGT...GGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp ATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGCCATGCACTGGTGAATaGCTGTTTGCAAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: IECIETRGWGLMRISTIQPCTGE*LFASCT
Trigger: TGTACAACTTGCAAACAGCCATTCACCAGTGCATGG...CTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCAGGCTCCATAGCCATTaGATTCAACCGCAGCACCCT +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLRLHSH*IQPQHP
Trigger: AGGGTGCTGCGGTTGAATCCAATGGCTATGGAGCCT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAGGCTTGCTACCTGGCTaGAATGGTTGCAGTAACCTT +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKGLLPG*NGCSNL
Trigger: AAGGTTACTGCAACCATTCCAGCCAGGTAGCAAGCC...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAATCATATACATGTGTAGCTGCTaGGCTCATCTTTACAAATAC +
Preference number: 4 (lower is better)
Translates to: PTHPMGVCRKQVQKYKIIYMCSC*AHLYKY
Trigger: GTATTTGTAAAGATGAGCCCAGCAGCTACACATGTA...TATGATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR CCA 90 bp GTAGCCACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATAGAAACAAGGGGTTaGGGACTCATGCGCATTTCC +
Preference number: 4 (lower is better)
Translates to: VATKSIYLKNRIRRAILCIETRG*GLMRIS
Trigger: GGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTAT...GCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR CCA 90 bp AACATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATAATAGAAACAAGGGGTTaGGGACTCATGCGCATTTCC +
Preference number: 4 (lower is better)
Translates to: NIECIETRGWGLMRISTIIETRG*GLMRIS
Trigger: GGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTAT...TATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GAAAGTGTTCTCCTGGACGGTTCTGCACAGAATTCATTCACAGAGCATGTCTTGCAGTTATGTTCCAAATaGGTTTTCACAGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: ESVLLDGSAQNSFTEHVLQLCSK*VFTGQG
Trigger: ACCTTGACCTGTGAAAACCCATTTGGAACATAACTG...CAAGACATGCTCTGTGAATGAATTCTGTGCAGAACCGTCCAGGAGAACACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
3UTR CAA 72 bp GCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTaGAATGCTAACTCACACCTTGCTAACCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: AFQLLVWRRILC*NANSHLANLLT
Trigger: TGTCAGGAGGTTAGCAAGGTGTGAGTTAGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAGAAACCATGCACTGGTaGATGGCTGTTTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQETMHW*MAVCKL
Trigger: CAACTTGCAAACAGCCATTCACCAGTGCATGGTTTC...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAGAAACCATGCACTGGTaGATGGCTGTTTGCAAGTTG +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKETMHW*MAVCKL
Trigger: CAACTTGCAAACAGCCATTCACCAGTGCATGGTTTC...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAAAACAGGTGTGCTGGTaGCAAGCACTCTCATATTCT +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVKQVCW*QALSYS
Trigger: AGAATATGAGAGTGCTTGTCACCAGCACACCTGTTT...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAGAGTCAAGTGCTATTTaGACACCAACTGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTESSAI*TPTGAD
Trigger: ATCTGCCCCAGTTGGTGTTCAAATAGCACTTGACTC...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp ATTTTGATTCTCCTTGAAAATTTATGCCATCTGATAAGCGGTAACCTAGTTCCCCCCTCTCTATGGGACTaGTTCACTGTTCCAATGTGG +
Preference number: 4 (lower is better)
Translates to: ILILLENLCHLISGNLVPPSLWD*FTVPMW
Trigger: CCACATTGGAACAGTGAATCAGTCCCATAGAGAGGG...GGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGATACCACAACTGCTTCTaGCAGCTGTTGATTCTGCTA +
Preference number: 4 (lower is better)
Translates to: LLELILPEMWMLSRKSERYHNCF*QLLILL
Trigger: TAGCAGAATCAACAGCTGTCAGAAGCAGTTGTGGTA...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTAAAACTCATTGTGAGTaGCCAAAGGTCCCCAGGTAT +
Preference number: 4 (lower is better)
Translates to: DLQAFQLLVWRRILCLNAKTHCE*PKVPRY
Trigger: ATACCTGGGGACCTTTGGTCACTCACAATGAGTTTT...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGACACTGGTTTTCTTTTTaGAGGCACCCTTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LLELILPEMWMLSRKSERHWFSF*RHPCRF
Trigger: AAACCTGCAAGGGTGCCTTCAAAAAGAAAACCAGTG...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGACCTCTCCAACCCAGGTaGAAGCAAGAAAGTATATGT +
Preference number: 4 (lower is better)
Translates to: LLELILPEMWMLSRKSERPLQPR*KQESIC
Trigger: ACATATACTTTCTTGCTTTCACCTGGGTTGGAGAGG...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CTATTGAAAGCTCTGACTGCAAGTCAAAGGCTGCTGATATCTGAGGGTGGATATGTCAAACCAACCTTTTaGAATTTCCAACATGCCCTT +
Preference number: 4 (lower is better)
Translates to: LLKALTASQRLLISEGGYVKPTF*NFQHAL
Trigger: AAGGGCATGTTGGAAATTTCAAAAGGTTGGTTTGAC...ATATCCACCCTCAGATATCAGCAGCCTTTGACTTGCAGTCAGAGCTTTCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp TTACATTGTGTTATAGCAGAAACAGTGGAGTCTGGACTGGACATTTGTAAGGGTAGGAGGGAGGGCTGTTaGATACGTGTGTGTATTTTT +
Preference number: 4 (lower is better)
Translates to: LHCVIAETVESGLDICKGRREGC*IRVCIF
Trigger: AAAAATACACACACGTATTCAACAGCCCTCCCTCCT...ACCCTTACAAATGTCCAGTCCAGACTCCACTGTTTCTGCTATAACACAATGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCTCCCGTTTGCTTAAGTaGTGGGGTTTGCCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLSRLLK*WGLPCL
Trigger: CAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGA...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CAATTATTTGGCTATCTTTTCACTAAGCTAGGTAATCTAGCCAGAAGGTGGATATCCCGTTTGCTTAAGTaGTGGGGTTTGCCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: QLFGYLFTKLGNLARRWISRLLK*WGLPCL
Trigger: CAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGA...TATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGCGAGAATTCCCGTTTaGTTAAGTGCTGGGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLARIPV*LSAGVC
Trigger: GCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAGTGTTCTGTGCGTGTTaGAAGAGAAACCATGCACTG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTVFCAC*KRNHAL
Trigger: CAGTGCATGGTTTCTCTTGCAACACGCACAGAACAC...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCCCTGGCTGGAATGGTTaGAGTAACCTTTGCATAGGG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLPGWNG*SNLCIG
Trigger: CCCTATGCAAAGGTTACTGCAACCATTCCAGCCAGG...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAGGGCACAGGCATAGTTaGACAGCTCGCATTTATAAG +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQGHRHS*TARIYK
Trigger: CTTATAAATGCGAGCTGTGCAACTATGCCTGTGCCC...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAACAGCGCTTGCAATGTTaGGTCCAAGTAAGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQQRLQC*VQVSKL
Trigger: GAGCTTACTTACTTGGACGCAACATTGCAAGCGCTG...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACACAGCGCTTGCAATGTTaGGTCCAAGTAAGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTQRLQC*VQVSKL
Trigger: GAGCTTACTTACTTGGACGCAACATTGCAAGCGCTG...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGAGAGGCCCCTCCAGTaGAGAAGTTTATCTGCTATG +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLERPLQ*RSLSAM
Trigger: CATAGCAGATAAACTTCTGCACTGGAGGGGCCTCTC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642384.2
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTATCTTTACAAATACCCTaGGGGGCATATTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVSLQIP*GAYSAL
Trigger: GAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGA...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642384.2
CDS-3UTR GCA 90 bp CGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACAGACAAACAGGATTCGGCGTaGCATATTATGCATTATTTA +
Preference number: 4 (lower is better)
Translates to: RLLGGYCQKTSQTSRMTDKQDSA*HIMHYL
Trigger: TAAATAATGCATAATATGGCACGCCGAATCCTGTTT...GTCTGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR GCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTGATACAAACAGAGGCTaGAAACATCGTCACGGACTT +
Preference number: 4 (lower is better)
Translates to: DLQAFQLLVWRRILCLNADTNRG*KHRHGL
Trigger: AAGTCCGTGACGATGTTTGCAGCCTCTGTTTGTATC...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CTTAAAGTCAAGGTCATGGTGTCATCCCACCACGGGGCTGTGTTTAATTACAGCTACCTTTTATGTGGTTaGCAAACACATTCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: LKVKVMVSSHHGAVFNYSYLLCG*QTHSSR
Trigger: TCTAGAAGAATGTGTTTGGCAACCACATAAAAGGTA...GCTGTAATTAAACACAGCCCCGTGGTGGGATGACACCATGACCTTGACTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp GCCACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATTAGGGAAGATGAATTGTaGGAGAGCCGTCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: ATKSIYLKNRIRRAILCIREDEL*ESRHGF
Trigger: AAAGCCATGACGGCTCTCCCACAATTCATCTTCCCT...AATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000359629.10
CDS-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAAGGGAAGATGAATTGTaGGAGAGCCGTCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQREDEL*ESRHGF
Trigger: AAAGCCATGACGGCTCTCCCACAATTCATCTTCCCT...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGGCTTGCTACCTGGCTaGAATGGTTGCAGTAACCTT +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLGLLPG*NGCSNL
Trigger: AAGGTTACTGCAACCATTCCAGCCAGGTAGCAAGCC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp ATTTTCCTTCCAGTCACAAGACAACACATGGAAATGGTCATTCCCACATCCTGCTCACAAGACAACACATaGAAATGGTCATTCCCACAT +
Preference number: 4 (lower is better)
Translates to: IFLPVTRQHMEMVIPTSCSQDNT*KWSFPH
Trigger: ATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGA...GCAGGATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGACTGGAAGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGACTTTCTTGTAAAGTTTaGGGGAGAGAGAGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLELILPEMWMLSRKSERLSCKV*GRERGE
Trigger: CTCTCCTCTCTCTCTCCCCCAAACTTTACAAGAAAG...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp CTATTGAAAGCTCTGACTGCAAGTCAAAGGCTGCTGATATCTGAGGGTGGATATAAAGAAAAGCAGACTTaGAATTGTGCAGACGTGCTT +
Preference number: 4 (lower is better)
Translates to: LLKALTASQRLLISEGGYKEKQT*NCADVL
Trigger: AAGCACGTCTGCACAATTCCAAGTCTGCTTTTCTTT...ATATCCACCCTCAGATATCAGCAGCCTTTGACTTGCAGTCAGAGCTTTCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCTTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACATTATTGTCTGCAATATaGATCCCATGGAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTLLSAI*IPWRGG
Trigger: GCCACCTCTCCATGGGATTCATATTGCAGACAATAA...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAATTATTGTCTGCAATATaGATCCCATGGAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQLLSAI*IPWRGG
Trigger: GCCACCTCTCCATGGGATTCATATTGCAGACAATAA...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAAAACAGGTGTGCTGGTaGCAAGCACTCTCATATTCT +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTKQVCW*QALSYS
Trigger: AGAATATGAGAGTGCTTGTCACCAGCACACCTGTTT...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGAGTCAAGTGCTATTTaGACACCAACTGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLESSAI*TPTGAD
Trigger: ATCTGCCCCAGTTGGTGTTCAAATAGCACTTGACTC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTAGACTGATTCAGTTCTaGATAACATGCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VYLELVKENTSGLVLLVFRLIQF*ITCCQP
Trigger: GGGCTGGCAGCATGTTATTCAGAACTGAATCAGTCT...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGAGAAGAATCCTTTGCTTaGATGCTAACTCACACCTTG +
Preference number: 4 (lower is better)
Translates to: LLELILPEMWMLSRKSEREESFA*MLTHTL
Trigger: CAAGGTGTGAGTTAGCATTCAAGCAAAGGATTCTTC...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp CAAGCAGGTGCACTCCCAGTGTTCAGAACTGGAATTCATTTGTCTTGGAAGAAATCTTGGATATACAGCTaGCTAGATATGTCAGTTATG +
Preference number: 4 (lower is better)
Translates to: QAGALPVFRTGIHLSWKKSWIYS*LDMSVM
Trigger: CATAACTGACATATCTAGTCAGCTGTATATCCAAGA...TTTCTTCCAAGACAAATGAATTCCAGTTCTGAACACTGGGAGTGCACCTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR TCA 90 bp ACCACTGACCTATTATGGTTCAACTTTGTGGTCAAACTAGGTCGGAGAGACAAGCCAAAACCTCAAATCTaGCATGATGGGATAATGTTT +
Preference number: 4 (lower is better)
Translates to: TTDLLWFNFVVKLGRRDKPKPQI*HDGIMF
Trigger: AAACATTATCCCATCATGTCAGATTTGAGGTTTTGG...CTTGTCTCTCCGACCTAGTTTGACCACAAAGTTGAACCATAATAGGTCAGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTATTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CAATTATTTGGCTATCTTTTCACTAAGCTAGGTAATCTAGCCAGAAGGTGGATAGTGTTCTGTGCGTGTTaGAAGAGAAACCATGCACTG +
Preference number: 4 (lower is better)
Translates to: QLFGYLFTKLGNLARRWIVFCAC*KRNHAL
Trigger: CAGTGCATGGTTTCTCTTGCAACACGCACAGAACAC...TATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAATCCATGAGTGTTCTGTaGGTGTTGCAAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKSMSVL*VLQEKP
Trigger: TGGTTTCTCTTGCAACACGCACAGAACACTCATGGA...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGGGCACAGGCATAGTTaGACAGCTCGCATTTATAAG +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLGHRHS*TARIYK
Trigger: CTTATAAATGCGAGCTGTGCAACTATGCCTGTGCCC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAGCCCCATACAGATCATaGATTCAAACGGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKAPYRS*IQTVRT
Trigger: TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGC...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAGCCCCATACAGATCATaGATTCAAACGGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQAPYRS*IQTVRT
Trigger: TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGC...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAACAGGCAGAGTCAAGTaGTATTTGAACACCAACTGG +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQTGRVK*YLNTNW
Trigger: CCAGTTGGTGTTCAAATAGCACTTGACTCTGCCTGT...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAACAGGCAGAGTCAAGTaGTATTTGAACACCAACTGG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTTGRVK*YLNTNW
Trigger: CCAGTTGGTGTTCAAATAGCACTTGACTCTGCCTGT...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAATTAGCTTGCAGTACTaGATACAGTATGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTISLQY*IQYGSR
Trigger: CCTGCTGCCATACTGTATGCAGTACTGCAAGCTAAT...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp ATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATCTGAGAAAAGTTCTGTaGAAATTAACTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: MYRNKGLGTHAHFHNTGNLRKVL*KLTGPE
Trigger: TTCTGGCCCAGTTAATTTGCACAGAACTTTTCTCAG...ATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR GCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGAGAGTGCAAATCCTGTTaGTTGAGATTTGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LLELILPEMWMLSRKSERECKSC*LRFAFL
Trigger: CAGAAAGGCAAATCTCAAGCAACAGGATTTGCACTC...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp ATTTTCCTTCCAGTCACAAGACAACACATGGAAATGGTCATTCCCACATCCTGCGGCTTCTCTAGGCTCTaGTATTATACTTGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: IFLPVTRQHMEMVIPTSCGFSRL*YYTCSL
Trigger: TAAAGAACAAGTATAATAGCAGAGCCTAGAGAAGCC...GCAGGATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGACTGGAAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp ATTTTGATTCTCCTTGAAAATTTATGCCATCTGATAAGCGGTAACCTAGTTCCCAGGGAAGATGAATTGTaGGAGAGCCGTCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: ILILLENLCHLISGNLVPREDEL*ESRHGF
Trigger: AAAGCCATGACGGCTCTCCCACAATTCATCTTCCCT...GGGAACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000359629.10
CDS-3UTR CCA 90 bp CAAGCAGGTGCACTCCCAGTGTTCAGAACTGGAATTCATTTGTCTTGGAAGAAAGAAATAATACAAAGATaGCGCAGGGAAGATGAATTG +
Preference number: 4 (lower is better)
Translates to: QAGALPVFRTGIHLSWKKEIIQR*RREDEL
Trigger: CAATTCATCTTCCCTGCGCCATCTTTGTATTATTTC...TTTCTTCCAAGACAAATGAATTCCAGTTCTGAACACTGGGAGTGCACCTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLQRAVV*FIICKN
Trigger: ATTCTTACAGATGATGAACCAGACCACGGCCCGTTG...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAACCATGCACTGGTGAATaGCTGTTTGCAAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKPCTGE*LFASCT
Trigger: TGTACAACTTGCAAACAGCCATTCACCAGTGCATGG...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CTGGGCCAGAAAGAATTTTTACCACCTGTTTGTAGATGTAACTTATTTGTGGCACCATGCACTGGTGAATaGCTGTTTGCAAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: LGQKEFLPPVCRCNLFVAPCTGE*LFASCT
Trigger: TGTACAACTTGCAAACAGCCATTCACCAGTGCATGG...TGCCACAAATAAGTTACATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACACCATGCACTGGTGAATaGCTGTTTGCAAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTPCTGE*LFASCT
Trigger: TGTACAACTTGCAAACAGCCATTCACCAGTGCATGG...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAACTCTCAGAACGGAACTaGAAACAGCAACATGTTTGC +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKLSERN*KQQHVC
Trigger: GCAAACATGTTGCTGTTTCCAGTTCCGTTCTGAGAG...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGCATTTTGATTCTCCTTGAAAATTTATGCCATCTGATAAGCGGTAACCTAGTTCGCACAACGGCTTCTTaGAGGCTACTGTCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: CILILLENLCHLISGNLVRTTAS*RLLSEN
Trigger: GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCG...AACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CCA 90 bp GCCACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATTAATCTAGCCAGAAGGTaGATAGGTAGGATTTTCCCC +
Preference number: 4 (lower is better)
Translates to: ATKSIYLKNRIRRAILCINLARR*IGRIFP
Trigger: GGGGAAAATCCTACCTATCCACCTTCTGGCTAGATT...AATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGAAAAAGCTCTCTGCTGTaGGGATTTCATTTGAACTGC +
Preference number: 4 (lower is better)
Translates to: LLELILPEMWMLSRKSERKSSLL*GFHLNC
Trigger: GCAGTTCAAATGAAATCCCCACAGCAGAGAGCTTTT...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTCCACTGGGAATTCTCTaGCAGAGACTGATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: VYLELVKENTSGLVLLVFPLGIL*QRLIQF
Trigger: GAACTGAATCAGTCTCTGCCAGAGAATTCCCAGTGG...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp CAAGTACGTGTCTGTGCTGACTTGTTAAGCAATCCACTTGTATGTAGAATAAGAATAGCAATTAACTTCTaGTCAGCAGTGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QVRVCADLLSNPLVCRIRIAINF*SAVCRQ
Trigger: CTGCCTGCACACTGCTGACCAGAAGTTAATTGCTAT...TCTTATTCTACATACAAGTGGATTGCTTAACAAGTCAGCACAGACACGTACTTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp ATGTCACATAAGGTAAATGTGGTGGATTCAAGAAATACACTCCACAAATGCAGCCTGGCCAGTCGAAAATaGCATCTTAAAGTCAAGGTC +
Preference number: 4 (lower is better)
Translates to: MSHKVNVVDSRNTLHKCSLASRK*HLKVKV
Trigger: GACCTTGACTTTAAGATGCCATTTTCGACTGGCCAG...GCTGCATTTGTGGAGTGTATTTCTTGAATCCACCACATTTACCTTATGTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp GAAACAGGTACAGAAGTACAAAATCATAAGCAGCCTCATTGTCTTATAAGCATTTTTCATCTCGATTGGTaGAGGGGAAGGTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: ETGTEVQNHKQPHCLISIFHLDW*RGRWLI
Trigger: GATAAGCCACCTTCCCCTTCACCAATCGAGATGAAA...AATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR TCA 90 bp AATAAGAAACTACTGACATTTATCACCTTCTTTAGGATTTACCGCTCGCCCAGTTGTGATTGTCTGTTCTaGTGTGAACTTCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: NKKLLTFITFFRIYRSPSCDCLF*CELLSS
Trigger: GGAGGAAAGAAGTTCACATCAGAACAGACAATCACA...ACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR TCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGATATACCTTGAGTTGGTaGAGGAGAATACTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: LLELILPEMWMLSRKSERYTLSW*RRILQV
Trigger: AACCTGAAGTATTCTCCTTCACCAACTCAAGGTATA...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAATTTCTAAGCAGAGGCTaGCATTGCATTGTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKFLSRG*HCIVSV
Trigger: AACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAA...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCTCCATGAGTGTTCTGTaGGTGTTGCAAGAGAAACCA +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLSMSVL*VLQEKP
Trigger: TGGTTTCTCTTGCAACACGCACAGAACACTCATGGA...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAGCGTTCCAGGGCTTTTaGACATTACACATTCAATTT +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVAFQGF*TLHIQF
Trigger: AAATTGAATGTGTAATGTGCAAAAGCCCTGGAACGC...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCATTAGCTTGCAGTACTaGATACAGTATGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLISLQY*IQYGSR
Trigger: CCTGCTGCCATACTGTATGCAGTACTGCAAGCTAAT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTTTAGAAAGGATAGGATaGAGAGCTGCATGGAACCCA +
Preference number: 4 (lower is better)
Translates to: VYLELVKENTSGLVLLVFLERIG*RAAWNP
Trigger: TGGGTTCCATGCAGCTCTGCATCCTATCCTTTCTAA...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGATGGAGAAGAATCCTTTaGTTGAATGCTAACTCACAC +
Preference number: 4 (lower is better)
Translates to: LLELILPEMWMLSRKSERWRRIL*LNANSH
Trigger: GTGTGAGTTAGCATTCAAGCAAAGGATTCTTCTCCA...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTCTGTTGCTTGAGATTTaGCTTTCTGATTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: DLQAFQLLVWRRILCLNALLLEI*LSDFLH
Trigger: ATGGAGGAAATCAGAAAGGCAAATCTCAAGCAACAG...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp TTTAGACAACCAGGGAGTTCAAGCAAATATCTCTTATTTCCCTACATAGATTCAACCCACACACCTAGCTaGCTCCCTGCTAAAATTAAC +
Preference number: 4 (lower is better)
Translates to: FRQPGSSSKYLLFPYIDSTHTPS*LPAKIN
Trigger: GTTAATTTTAGCAGGGAGGCAGCTAGGTGTGTGGGT...TGAATCTATGTAGGGAAATAAGAGATATTTGCTTGAACTCCCTGGTTGTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCCTCTCAGAACGGAACTaGAAACAGCAACATGTTTGC +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLLSERN*KQQHVC
Trigger: GCAAACATGTTGCTGTTTCCAGTTCCGTTCTGAGAG...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAAGAATGTATGCAGCATaGTCTTTTTCTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVRMYAA*SFSLSL
Trigger: GAGAGAGAGAGAAAAAGACCATGCTGCATACATTCT...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAACACCACCAAGACAATaGAACCCTAAAATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTTPPRQ*NPKMQF
Trigger: GAACTGCATTTTAGGGTTCCATTGTCTTGGTGGTGT...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTACAAACCGCCATTATATaGCTTCTCATCTGTAATGTC +
Preference number: 4 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVQTAII*LLICNV
Trigger: GACATTACAGATGAGAAGCCATATAATGGCGGTTTG...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TTTAGACAACCAGGGAGTTCAAGCAAATATCTCTTATTTCCCTACATAGATTCAACACGTCACCAAGGCTaGAAATGGACAATGGAAGCT +
Preference number: 4 (lower is better)
Translates to: FRQPGSSSKYLLFPYIDSTRHQG*KWTMEA
Trigger: AGCTTCCATTGTCCATTTCCAGCCTTGGTGACGTGT...TGAATCTATGTAGGGAAATAAGAGATATTTGCTTGAACTCCCTGGTTGTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGATTGCTACAGTTCTTaGAGACTTTCCCACAGTACT +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLDCYSS*RLSHST
Trigger: AGTACTGTGGGAAAGTCTTCAAGAACTGTAGCAATC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTCTAACTGCCTTCAAGTaGTTTTCCCTATTAGAGCGT +
Preference number: 4 (lower is better)
Translates to: VYLELVKENTSGLVLLVFLTAFK*FSLLER
Trigger: ACGCTCTAATAGGGAAAATCACTTGAAGGCAGTTAG...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAGCGTTCCAGGGCTTTTaGACATTACACATTCAATTT +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTAFQGF*TLHIQF
Trigger: AAATTGAATGTGTAATGTGCAAAAGCCCTGGAACGC...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAACTAGTGTATTTAATTaGGTTCCAGGGCTTTTGCAC +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKTSVFN*VPGLLH
Trigger: GTGCAAAAGCCCTGGAACGCAATTAAATACACTAGT...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAACCAACGTTATTAGCTTaGAGTACTGCATACAGTATG +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQPTLLA*STAYSM
Trigger: CATACTGTATGCAGTACTGCAAGCTAATAACGTTGG...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGTGCAGAAGTTTATCTaGTATGTGTTCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLVQKFI*YVFLFG
Trigger: CCCAAACAGGAACACATAGCAGATAAACTTCTGCAC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642384.2
CDS-3UTR GCA 90 bp GAAACAGGTACAGAAGTACAAAATCATAAGCAGCCTCATTGTCTTATAAGCATTTCTTTACAAATACCCTaGGGGGCATATTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: ETGTEVQNHKQPHCLISISLQIP*GAYSAL
Trigger: GAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGA...AATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000647472.1
CDS-3UTR GCA 90 bp GCCACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATTTTGTACATGTGTAGCTaGTGGGCTCATCTTTACAAA +
Preference number: 4 (lower is better)
Translates to: ATKSIYLKNRIRRAILCILYMCS*WAHLYK
Trigger: TTTGTAAAGATGAGCCCAGCAGCTACACATGTACAA...AATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
CDS-3UTR GCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAATTGTACATGTGTAGCTaGTGGGCTCATCTTTACAAA +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQLYMCS*WAHLYK
Trigger: TTTGTAAAGATGAGCCCAGCAGCTACACATGTACAA...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642384.2
CDS-3UTR GCA 90 bp GAAACAGGTACAGAAGTACAAAATCATAAGCAGCCTCATTGTCTTATAAGCATTCAAACAGGCCACTCGTaGAATCAGGGTTATTTGTCA +
Preference number: 4 (lower is better)
Translates to: ETGTEVQNHKQPHCLISIQTGHS*NQGYLS
Trigger: TGACAAATAACCCTGATTGCACGAGTGGCCTGTTTG...AATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR GCA 90 bp TTACATTGTGTTATAGCAGAAACAGTGGAGTCTGGACTGGACATTTGTAAGGGTGCGTCGGAATTTATGTaGAATGGTAGAATGTTAACT +
Preference number: 4 (lower is better)
Translates to: LHCVIAETVESGLDICKGASEFM*NGRMLT
Trigger: AGTTAACATTCTACCATTGCACATAAATTCCGACGC...ACCCTTACAAATGTCCAGTCCAGACTCCACTGTTTCTGCTATAACACAATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCACACCACCAAGACAATaGAACCCTAAAATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLTPPRQ*NPKMQF
Trigger: GAACTGCATTTTAGGGTTCCATTGTCTTGGTGGTGT...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CAATTATTTGGCTATCTTTTCACTAAGCTAGGTAATCTAGCCAGAAGGTGGATAAGAAACCAGAAAACCTaGCTTCTCTGCTTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: QLFGYLFTKLGNLARRWIRNQKT*LLCFLS
Trigger: AGAGAGAAAGCAGAGAAGCCAGGTTTTCTGGTTTCT...TATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646249.1
3UTR CAA 72 bp TTCAAATCCTGCATGGTAGCCACCAAAAGCATATATTaGAAAAACAGGATTCGGCGTGCCATATTATGCATT +
Preference number: 4 (lower is better)
Translates to: FKSCMVATKSIY*KNRIRRAILCI
Trigger: AATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGCTACCATGCAGGATTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR TCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACATACCTCACCCAATGCTaGATTAAGCTACAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTYLTQC*IKLQVY
Trigger: ATAAACTTGTAGCTTAATTCAGCATTGGGTGAGGTA...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACACAACCTCTGTATCTCTaGTTAGAGAAAAGATACAGA +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTQPLYL*LEKRYR
Trigger: TCTGTATCTTTTCTCTAATCAGAGATACAGAGGTTG...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GAAACAGGTACAGAAGTACAAAATCATAAGCAGCCTCATTGTCTTATAAGCATTTGTGATTGTCTGTTCTaGTGTGAACTTCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ETGTEVQNHKQPHCLISICDCLF*CELLSS
Trigger: GGAGGAAAGAAGTTCACATCAGAACAGACAATCACA...AATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR TCA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTAATCATGGTATACCTTaGGTTGGTGAAGGAGAATAC +
Preference number: 4 (lower is better)
Translates to: VYLELVKENTSGLVLLVFNHGIP*VGEGEY
Trigger: GTATTCTCCTTCACCAACTCAAGGTATACCATGATT...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTAGAGCAGCAGCTGAATaGGAAAACTTACTTGATCTA +
Preference number: 4 (lower is better)
Translates to: VYLELVKENTSGLVLLVFRAAAE*ENLLDL
Trigger: TAGATCAAGTAAGTTTTCTCATTCAGCTGCTGCTCT...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR TCA 90 bp GTTAATCTAAGACTGAATAACCTATTTGGGACCTCAGTAAGAAGTGTGGTTTTACCTTATTCTCCTATCTaGAAGTCCCGAATTCTAAGC +
Preference number: 4 (lower is better)
Translates to: VNLRLNNLFGTSVRSVVLPYSPI*KSRILS
Trigger: GCTTAGAATTCGGGACTTTCAGATAGGAGAATAAGG...TAAAACCACACTTCTTACTGAGGTCCCAAATAGGTTATTCAGTCTTAGATTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCACTAGTGTATTTAATTaGGTTCCAGGGCTTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLTSVFN*VPGLLH
Trigger: GTGCAAAAGCCCTGGAACGCAATTAAATACACTAGT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCCCAACGTTATTAGCTTaGAGTACTGCATACAGTATG +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLPTLLA*STAYSM
Trigger: CATACTGTATGCAGTACTGCAAGCTAATAACGTTGG...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp GAAACAGGTACAGAAGTACAAAATCATAAGCAGCCTCATTGTCTTATAAGCATTGTGCAGAAGTTTATCTaGTATGTGTTCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ETGTEVQNHKQPHCLISIVQKFI*YVFLFG
Trigger: CCCAAACAGGAACACATAGCAGATAAACTTCTGCAC...AATGCTTATAAGACAATGAGGCTGCTTATGATTTTGTACTTCTGTACCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
CDS-3UTR GCA 90 bp TTACATTGTGTTATAGCAGAAACAGTGGAGTCTGGACTGGACATTTGTAAGGGTTGTGGTTTTAATTCTTaGTTGACAGACACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: LHCVIAETVESGLDICKGCGFNS*LTDTVF
Trigger: AAACACAGTGTCTGTCAAGCAAGAATTAAAACCACA...ACCCTTACAAATGTCCAGTCCAGACTCCACTGTTTCTGCTATAACACAATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp GTTAATCTAAGACTGAATAACCTATTTGGGACCTCAGTAAGAAGTGTGGTTTTAATTGAAAGCTCTGACTaGAAGTCAAAGGCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: VNLRLNNLFGTSVRSVVLIESSD*KSKAAD
Trigger: ATCAGCAGCCTTTGACTTGCAGTCAGAGCTTTCAAT...TAAAACCACACTTCTTACTGAGGTCCCAAATAGGTTATTCAGTCTTAGATTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAGAAATAATACAAAGATaGCGCAGGGAAGATGAATTG +
Preference number: 4 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTEIIQR*RREDEL
Trigger: CAATTCATCTTCCCTGCGCCATCTTTGTATTATTTC...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAGAAATAATACAAAGATaGCGCAGGGAAGATGAATTG +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKEIIQR*RREDEL
Trigger: CAATTCATCTTCCCTGCGCCATCTTTGTATTATTTC...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCAGAATGTATGCAGCATaGTCTTTTTCTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLRMYAA*SFSLSL
Trigger: GAGAGAGAGAGAAAAAGACCATGCTGCATACATTCT...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAATATAGACCTGTAAACTaGGAAAATTGTACAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQYRPVN*ENCTVH
Trigger: GTGCACTGTACAATTTTCCCAGTTTACAGGTCTATA...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAATATAGACCTGTAAACTaGGAAAATTGTACAGTGCAC +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKYRPVN*ENCTVH
Trigger: GTGCACTGTACAATTTTCCCAGTTTACAGGTCTATA...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCAAACCGCCATTATATaGCTTCTCATCTGTAATGTC +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLQTAII*LLICNV
Trigger: GACATTACAGATGAGAAGCCATATAATGGCGGTTTG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTACATGTGTAGCTGCTaGGCTCATCTTTACAAATAC +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLYMCSC*AHLYKY
Trigger: GTATTTGTAAAGATGAGCCCAGCAGCTACACATGTA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642384.2
CDS-3UTR CCA 90 bp GTTAATCTAAGACTGAATAACCTATTTGGGACCTCAGTAAGAAGTGTGGTTTTAGATTTAGCAAGGCTTTaGATCTCCGAAGACGACAAA +
Preference number: 4 (lower is better)
Translates to: VNLRLNNLFGTSVRSVVLDLARL*ISEDDK
Trigger: TTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATC...TAAAACCACACTTCTTACTGAGGTCCCAAATAGGTTATTCAGTCTTAGATTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CCA 90 bp CAAGTACGTGTCTGTGCTGACTTGTTAAGCAATCCACTTGTATGTAGAATAAGATCTTTATACGTTTTGTaGATCTACCACAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: QVRVCADLLSNPLVCRIRSLYVL*IYHNCF
Trigger: GAAGCAGTTGTGGTAGATCCACAAAACGTATAAAGA...TCTTATTCTACATACAAGTGGATTGCTTAACAAGTCAGCACAGACACGTACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp TTTAGACAACCAGGGAGTTCAAGCAAATATCTCTTATTTCCCTACATAGATTCAATGGACAATGGAAGCTaGACTAGGTGTAGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: FRQPGSSSKYLLFPYIDSMDNGS*TRCSKA
Trigger: AGCTTTACTACACCTAGTCCAGCTTCCATTGTCCAT...TGAATCTATGTAGGGAAATAAGAGATATTTGCTTGAACTCCCTGGTTGTCTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR TCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTACCTCACCCAATGCTaGATTAAGCTACAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLYLTQC*IKLQVY
Trigger: ATAAACTTGTAGCTTAATTCAGCATTGGGTGAGGTA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR TCA 90 bp GTTAATCTAAGACTGAATAACCTATTTGGGACCTCAGTAAGAAGTGTGGTTTTAAAACAAGTCATTGGCTaGACTGCAAATGCCTATATG +
Preference number: 4 (lower is better)
Translates to: VNLRLNNLFGTSVRSVVLKQVIG*TANAYM
Trigger: CATATAGGCATTTGCAGTTCAGCCAATGACTTGTTT...TAAAACCACACTTCTTACTGAGGTCCCAAATAGGTTATTCAGTCTTAGATTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR GCA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAAAAGTTTGCGTAAAATaGAATAGTATTGCCCCATAC +
Preference number: 4 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKKVCVK*NSIAPY
Trigger: GTATGGGGCAATACTATTGCATTTTACGCAAACTTT...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CAAGTACGTGTCTGTGCTGACTTGTTAAGCAATCCACTTGTATGTAGAATAAGACCCTGCTCAGAAATGTaGCACATTTTAACATTTATT +
Preference number: 4 (lower is better)
Translates to: QVRVCADLLSNPLVCRIRPCSEM*HILTFI
Trigger: AATAAATGTTAAAATGTGGCACATTTCTGAGCAGGG...TCTTATTCTACATACAAGTGGATTGCTTAACAAGTCAGCACAGACACGTACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CAAGTACGTGTCTGTGCTGACTTGTTAAGCAATCCACTTGTATGTAGAATAAGAATCAGTTCATCTTACTaGCTAAAAAGTTCATGCACT +
Preference number: 4 (lower is better)
Translates to: QVRVCADLLSNPLVCRIRISSSY*LKSSCT
Trigger: AGTGCATGAACTTTTTAGGCAGTAAGATGAACTGAT...TCTTATTCTACATACAAGTGGATTGCTTAACAAGTCAGCACAGACACGTACTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCAAAGATCAAATTAAGTaGCTCTGTTTTGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLKDQIK*LCFEQG
Trigger: GCCCTGTTCAAAACAGAGGCACTTAATTTGATCTTT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642384.2
CDS-3UTR CCA 90 bp TTATTTGGCTATCTTTTCACTAAGCTAGGTAATCTAGCCAGAAGGTGGATAGGTTCTGTGCAAATTAACTaGGCCAGAAAGAATTTTTAC +
Preference number: 4 (lower is better)
Translates to: LFGYLFTKLGNLARRWIGSVQIN*ARKNFY
Trigger: GTAAAAATTCTTTCTGGCCCAGTTAATTTGCACAGA...ACCTATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CCA 90 bp CAAGTACGTGTCTGTGCTGACTTGTTAAGCAATCCACTTGTATGTAGAATAAGAGCTTTTTCATTGGCTTaGAGTGGCATTAATTTTAGA +
Preference number: 4 (lower is better)
Translates to: QVRVCADLLSNPLVCRIRAFSLA*SGINFR
Trigger: TCTAAAATTAATGCCACTCCAAGCCAATGAAAAAGC...TCTTATTCTACATACAAGTGGATTGCTTAACAAGTCAGCACAGACACGTACTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CCA 90 bp CAAGTACGTGTCTGTGCTGACTTGTTAAGCAATCCACTTGTATGTAGAATAAGATCACTAAAGGAAACTTaGCAAGAAGATGCATCATTT +
Preference number: 4 (lower is better)
Translates to: QVRVCADLLSNPLVCRIRSLKET*QEDASF
Trigger: AAATGATGCATCTTCTTGCCAAGTTTCCTTTAGTGA...TCTTATTCTACATACAAGTGGATTGCTTAACAAGTCAGCACAGACACGTACTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGTATTACAGAATGTATaGAGCATGGTCTTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLVLQNV*SMVFFS
Trigger: AGAGAAAAAGACCATGCTGCATACATTCTGTAATAC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR GCA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGTATTACAGAATGTATaGAGCATGGTCTTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LYMICITECMQHGLFLSLVLQNV*SMVFFS
Trigger: AGAGAAAAAGACCATGCTGCATACATTCTGTAATAC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CCA 90 bp GTTAATCTAAGACTGAATAACCTATTTGGGACCTCAGTAAGAAGTGTGGTTTTAGAAATAATACAAAGATaGCGCAGGGAAGATGAATTG +
Preference number: 4 (lower is better)
Translates to: VNLRLNNLFGTSVRSVVLEIIQR*RREDEL
Trigger: CAATTCATCTTCCCTGCGCCATCTTTGTATTATTTC...TAAAACCACACTTCTTACTGAGGTCCCAAATAGGTTATTCAGTCTTAGATTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
3UTR CAA 72 bp TCTCTATTGTACAAACAAGTACGTGTCTGTGCTGACTaGTTAAGCAATCCACTTGTATGTAGAATAAGATTT +
Preference number: 4 (lower is better)
Translates to: SLLYKQVRVCAD*LSNPLVCRIRF
Trigger: AAATCTTATTCTACATACAAGTGGATTGCTTAACAAGTCAGCACAGACACGTACTTGTTTGTACAATAGAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR GCA 90 bp GTTAATCTAAGACTGAATAACCTATTTGGGACCTCAGTAAGAAGTGTGGTTTTACTTTGTAATTATTCATaGACGAAAGGTTTACCTCAC +
Preference number: 4 (lower is better)
Translates to: VNLRLNNLFGTSVRSVVLLCNYS*TKGLPH
Trigger: GTGAGGTAAACCTTTCGTGCATGAATAATTACAAAG...TAAAACCACACTTCTTACTGAGGTCCCAAATAGGTTATTCAGTCTTAGATTAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS CCA 90 bp CCCGTTTGCTTAAGTGCTGGGGTTTGCCTTGCTTGCGGCGAGACATaGTGGGCTGCGGGGCGGGCGGCGGCGGCGGCGGCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: PVCLSAGVCLACGET*WAAGRAAAAAAAAA
Trigger: CGCCGCCGCCGCCGCCGCCGCCGCCGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS GCA 90 bp CGGGCGAGAATTCCCGTTTGCTTAAGTGCTGGGGTTTGCCTTGCTTaGGGCGAGACATGGTGGGCTGCGGGGCGGGCGGCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: RARIPVCLSAGVCLA*GETWWAAGRAAAAA
Trigger: CGCCGCCGCCGCCGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS GCA 90 bp GAGGGAGCGCACGGCAACGCGGAATCCAGCCTAAGTTTGGAGGGCTaGGGGTCCGGAAGGGCAGCGCCCAAGTCTCCAGGAGCCCGCGCG +
Preference number: 5 (lower is better)
Translates to: EGAHGNAESSLSLEG*GSGRAAPKSPGARA
Trigger: CGCGCGGGCTCCTGGAGACTTGGGCGCTGCCCTTCCGGACCCGCAGCCCTCCAAACTTAGGCTGGATTCCGCGTTGCCGTGCGCTCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CAA 90 bp ATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGTACACGTTCTCCGTGTaGGGCATCGCGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: MTDHADVDWAARVHPTPGYTFSV*GIAAGG
Trigger: GCCCCCGGCCGCGATGCCCAACACGGAGAACGTGTA...CCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000631857.1
CDS-3UTR CAA 90 bp CAAGTGTCCCTGTGGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGTACACGTTCTCCGTGTaGGGCATCGCGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: QVSLWPSASARWPRLCFSYTFSV*GIAAGG
Trigger: GCCCCCGGCCGCGATGCCCAACACGGAGAACGTGTA...CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS GCA 90 bp GGGGGCGTCGCCAGGAAGGGCGGCTTGCTACCTGGCTGGAATGGTTaGAGTAACCTTTGCATAGGGCTGGGCCGGCCTGGGGACAGCGGT +
Preference number: 5 (lower is better)
Translates to: GGVARKGGLLPGWNG*SNLCIGLGRPGDSG
Trigger: ACCGCTGTCCCCAGGCCGGCCCAGCCCTATGCAAAGGTTACTGCAACCATTCCAGCCAGGTAGCAAGCCGCCCTTCCTGGCGACGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000477659.1
ENST00000642384.2
CDS-3UTR CAA 90 bp CCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGCCCAGGACCTGGTGGAAGGCCTTGGGGTTTGCCTTGCTaGCGGCGAGACATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: PRPGGRAYASRPGPGGRPWGLPC*RRDMVG
Trigger: GCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCA...AGGCCTTCCACCAGGTCCTGGGCGAGAAGCATAAGCGCGGCCACCTGGCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp ACTAGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCGCCAGGAAGGGCGGCTaGCTACCTGGCTGGAATGGT +
Preference number: 5 (lower is better)
Translates to: TSRMTDHADVDWAARVHPARKGG*LPGWNG
Trigger: ACCATTCCAGCCAGGTAGCAAGCCGCCCTTCCTGGC...GGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp AGCAGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCAGACCGTCGTCGGACTaGACCGTCATGGGGGACGAT +
Preference number: 5 (lower is better)
Translates to: SRMTDHADVDWAARVHPTRPSSD*TVMGDD
Trigger: ATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCT...GGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000631857.1
CDS CCA 90 bp TTGGATTCAACCGCAGCACCCTGTCAAAGGCACTCGGGTGATGGGTaGCCAGGGCCATCTCTTCCGCCCCCAGGCGCTCTATGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: LDSTAAPCQRHSGDG*PGPSLPPPGALCGG
Trigger: CCCACCGCATAGAGCGCCTGGGGGCGGAAGAGATGGCCCTGGCCACCCATCACCCGAGTGCCTTTGACAGGGTGCTGCGGTTGAATCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000477659.1
ENST00000642384.2
ENST00000643459.1
ENST00000645455.1
CDS CCA 90 bp AGAGCTGAGCCTCCAAGTTACAGCTCCGCAGCGGGCGAGGGGAGGTaGGAGGGAGCGCACGGCAACGCGGAATCCAGCCTAAGTTTGGAG +
Preference number: 5 (lower is better)
Translates to: RAEPPSYSSAAGEGR*EGAHGNAESSLSLE
Trigger: CTCCAAACTTAGGCTGGATTCCGCGTTGCCGTGCGCTCCCTCCCACCTCCCCTCGCCCGCTGCGGAGCTGTAACTTGGAGGCTCAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS GCA 90 bp AGGAAGGGCGGCTTGCTACCTGGCTGGAATGGTTGCAGTAACCTTTaGATAGGGCTGGGCCGGCCTGGGGACAGCGGTGGGCTAGACGTG +
Preference number: 5 (lower is better)
Translates to: RKGGLLPGWNGCSNL*IGLGRPGDSGGLDV
Trigger: CACGTCTAGCCCACCGCTGTCCCCAGGCCGGCCCAGCCCTATGCAAAGGTTACTGCAACCATTCCAGCCAGGTAGCAAGCCGCCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000477659.1
ENST00000642384.2
CDS GCA 90 bp AGCTGGCGCTCAGCTACAGGGGCCGTGGGAATAGCTGGAGGCCTGTaGATTTCCCTGAGGGTCTCCTTGGCGACAGGGCTGGACCTTTGC +
Preference number: 5 (lower is better)
Translates to: SWRSATGAVGIAGGL*ISLRVSLATGLDLC
Trigger: GCAAAGGTCCAGCCCTGTCGCCAAGGAGACCCTCAGGGAAATGCACAGGCCTCCAGCTATTCCCACGGCCCCTGTAGCTGAGCGCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS CCA 90 bp CCCAGGAAGAAGCTGGCGCTCAGCTACAGGGGCCGTGGGAATAGCTaGAGGCCTGTGCATTTCCCTGAGGGTCTCCTTGGCGACAGGGCT +
Preference number: 5 (lower is better)
Translates to: PRKKLALSYRGRGNS*RPVHFPEGLLGDRA
Trigger: AGCCCTGTCGCCAAGGAGACCCTCAGGGAAATGCACAGGCCTCCAGCTATTCCCACGGCCCCTGTAGCTGAGCGCCAGCTTCTTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS CCA 90 bp AATGGACACGGCAGGAAACAGCCTCAGCTTGGCCCAGGAAGAAGCTaGCGCTCAGCTACAGGGGCCGTGGGAATAGCTGGAGGCCTGTGC +
Preference number: 5 (lower is better)
Translates to: NGHGRKQPQLGPGRS*RSATGAVGIAGGLC
Trigger: GCACAGGCCTCCAGCTATTCCCACGGCCCCTGTAGCTGAGCGCCAGCTTCTTCCTGGGCCAAGCTGAGGCTGTTTCCTGCCGTGTCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp CAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGTGGGGTTTGCCTTGCTaGCGGCGAGACATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: QKGQGITHDSDGPRALSMWGLPC*RRDMVG
Trigger: GCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCA...CATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CAA 90 bp GAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGTGAAGAACAAGTGTCGCTGCTGCGTCTGCCCTCTTTaGAGCTGGGCCTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: ELSGYYAEWGCVKNKCRCCVCPL*SWACPG
Trigger: GCCCGGGCAGGCCCAGCTCAAAAGAGGGCAGACGCA...GCAGCGACACTTGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS TCA 90 bp ATAGCCATTGGATTCAACCGCAGCACCCTGTCAAAGGCACTCGGGTaGTGGGTGGCCAGGGCCATCTCTTCCGCCCCCAGGCGCTCTATG +
Preference number: 5 (lower is better)
Translates to: IAIGFNRSTLSKALG*WVARAISSAPRRSM
Trigger: CATAGAGCGCCTGGGGGCGGAAGAGATGGCCCTGGCCACCCATCACCCGAGTGCCTTTGACAGGGTGCTGCGGTTGAATCCAATGGCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000477659.1
ENST00000642384.2
ENST00000643459.1
ENST00000645455.1
CDS CCA 90 bp ATGGCTTCAAGAGGCTCGGGCGAGAATTCCCGTTTGCTTAAGTGCTaGGGTTTGCCTTGCTTGCGGCGAGACATGGTGGGCTGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: MASRGSGENSRLLKC*GLPCLRRDMVGCGA
Trigger: CGCCCCGCAGCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCCCGAGCCTCTTGAAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS-3UTR CAA 90 bp AGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: RMTDHADVDWAARVHPTPKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...AGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000631857.1
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp CCCTCTTTTGAGCTGGGCCTGCCCGGGCCCGGACCACTAATATGGGGCGTGCTCGTCATGGGGGACGATTaGTGCATGTGCGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: PSFELGLPGPGPLIWGVLVMGDD*CMCVFM
Trigger: CATGAAGACGCACATGCACAAATCGTCCCCCATGAC...GAGCACGCCCCATATTAGTGGTCCGGGCCCGGGCAGGCCCAGCTCAAAAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp CTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTTTGGCCACCACGGACTaGAGCGCGCTGCTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: LEGLCRTLSSHNGFLEATLATTD*SALLAL
Trigger: CAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCAA...AGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp TCCGTGTTGGGCATCGCGGCCGGGGGCAGGTCGAACTCCTTCTCGAGCTTGATGGGAGGCAAAAGGCGATaGTCTGGAGTCTCCGAAGCT +
Preference number: 5 (lower is better)
Translates to: SVLGIAAGGRSNSFSSLMGGKRR*SGVSEA
Trigger: AGCTTCGGAGACTCCAGACAATCGCCTTTTGCCTCC...CATCAAGCTCGAGAAGGAGTTCGACCTGCCCCCGGCCGCGATGCCCAACACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp AGGATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTAAACTGCCACACATCTaGAGCTCTCTGGGTACTACG +
Preference number: 5 (lower is better)
Translates to: RMTDHADVDWAARVHPTPKLPHI*SSLGTT
Trigger: CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTT...AGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000631857.1
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp GTGGAGAGACCGTCGTCGGACTTGACCGTCATGGGGGACGATTTGTGCATGTGCGACAGGGCTGGACCTTaGCACTGGCAGCCTGGACTC +
Preference number: 5 (lower is better)
Translates to: VERPSSDLTVMGDDLCMCDRAGP*HWQPGL
Trigger: GAGTCCAGGCTGCCAGTGCAAAGGTCCAGCCCTGTC...GCACATGCACAAATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCTCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS GCA 90 bp CTGTGCATTTCCCTGAGGGTCTCCTTGGCGACAGGGCTGGACCTTTaGACTGGCAGCCTGGACTCTTCTCTGAGCTCCCCCTTGGGTTAC +
Preference number: 5 (lower is better)
Translates to: LCISLRVSLATGLDL*TGSLDSSLSSPLGY
Trigger: GTAACCCAAGGGGGAGCTCAGAGAAGAGTCCAGGCTGCCAGTGCAAAGGTCCAGCCCTGTCGCCAAGGAGACCCTCAGGGAAATGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS CCA 90 bp CATTTCCCTGAGGGTCTCCTTGGCGACAGGGCTGGACCTTTGCACTaGCAGCCTGGACTCTTCTCTGAGCTCCCCCTTGGGTTACCTGCT +
Preference number: 5 (lower is better)
Translates to: HFPEGLLGDRAGPLH*QPGLFSELPLGLPA
Trigger: AGCAGGTAACCCAAGGGGGAGCTCAGAGAAGAGTCCAGGCTGCCAGTGCAAAGGTCCAGCCCTGTCGCCAAGGAGACCCTCAGGGAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS CCA 90 bp GAAGCGTTGCTAGGAGAATGGACACGGCAGGAAACAGCCTCAGCTTaGCCCAGGAAGAAGCTGGCGCTCAGCTACAGGGGCCGTGGGAAT +
Preference number: 5 (lower is better)
Translates to: EALLGEWTRQETASA*PRKKLALSYRGRGN
Trigger: ATTCCCACGGCCCCTGTAGCTGAGCGCCAGCTTCTTCCTGGGCCAAGCTGAGGCTGTTTCCTGCCGTGTCCATTCTCCTAGCAACGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp TGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACCTTAAGTGCTGGGGTTaGCCTTGCTTGCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: WRCRPRLEGLCRTLSSHNLKCWG*PCLRRD
Trigger: GTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAG...GTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CAA 90 bp CAAGTGTCCCTGTGGCCCTCGGCCTCGGCCAGGTGGCCGCGCTTATGCTTCTCGAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 5 (lower is better)
Translates to: QVSLWPSASARWPRLCFSSVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...CGAGAAGCATAAGCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp ATGACAGACCACGCTGACGTCGACTGGGCGGCACGCGTCCACCCCACCCCTGGGCTGTGGACAGTGAGATaGCTACAGTTCTTGAAGACT +
Preference number: 5 (lower is better)
Translates to: MTDHADVDWAARVHPTPGLWTVR*LQFLKT
Trigger: AGTCTTCAAGAACTGTAGCAATCTCACTGTCCACAG...CCCAGGGGTGGGGTGGACGCGTGCCGCCCAGTCGACGTCAGCGTGGTCTGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358510.6
CDS-3UTR CAA 90 bp GAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGTGAAGAACAAGTGTCGCTGCTCCCTGAGGGTCTCCTaGGCGACAGGGCTGGACCTT +
Preference number: 5 (lower is better)
Translates to: ELSGYYAEWGCVKNKCRCSLRVS*ATGLDL
Trigger: AAGGTCCAGCCCTGTCGCCAAGGAGACCCTCAGGGA...GCAGCGACACTTGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp AGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGAAGCCAGGTAGAGTaGCTCCCGGACACCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RLAGFRRARASLMTAMVHGSQVE*LPDTLL
Trigger: GAGGAGGGTGTCCGGGAGCAACTCTACCTGGCTTCC...GTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS GCA 90 bp AGAATGGCTTCAAGAGGCTCGGGCGAGAATTCCCGTTTGCTTAAGTaGTGGGGTTTGCCTTGCTTGCGGCGAGACATGGTGGGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: RMASRGSGENSRLLK*WGLPCLRRDMVGCG
Trigger: CCCGCAGCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCCCGAGCCTCTTGAAGCCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS CCA 90 bp GAGGAGGTCATGATCCCCTTCTGGAGCTCCCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAATGGCTTCAAGAGGCTCGGCTGGCCG +
Preference number: 5 (lower is better)
Translates to: EEVMIPFWSSQRAVV*FIICKNGFKRLGWP
Trigger: CGGCCAGCCGAGCCTCTTGAAGCCATTCTTACAGATGATGAACCAGACCACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGACCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000489516.7
ENST00000643222.1
ENST00000643459.1
CDS-3UTR CAA 90 bp CTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTTCGCATGACTTGGACTaGACCGGGGGCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LEGLCRTLSSHNGFLEATSHDLD*TGGWEG
Trigger: TCCCTCCCAGCCCCCGGTCAAGTCCAAGTCATGCGA...AGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACCAGAACTCGCATGACTaGGACTTGACCGGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYQNSHD*DLTGGW
Trigger: CCAGCCCCCGGTCAAGTCCAAGTCATGCGAGTTCTG...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp AGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTGGGTCGTTCTCGCTCTaGAACTTGGCCACCACGGAC +
Preference number: 5 (lower is better)
Translates to: RLEGLCRTLSSHNGFLEAGSFSL*NLATTD
Trigger: GTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCC...AGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp TCATCCCAGGCGTGGGGATTAGAGCTCCATGTGCAGAACGAGGGGAGGAGAGGCGGCCAAAGAGAAGCGTaGCTAGGAGAATGGACACGG +
Preference number: 5 (lower is better)
Translates to: SSQAWGLELHVQNEGRRGGQREA*LGEWTR
Trigger: CCGTGTCCATTCTCCTAGCAACGCTTCTCTTTGGCC...GCCTCTCCTCCCCTCGTTCTGCACATGGAGCTCTAATCCCCACGCCTGGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS CCA 90 bp GAGGAGGTCATGATCCCCTTCTGGAGCTCCCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAATGGCTTCAAGAGGCTCGGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: EEVMIPFWSSQRAVV*FIICKNGFKRLGWC
Trigger: GCACCAGCCGAGCCTCTTGAAGCCATTCTTACAGATGATGAACCAGACCACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGACCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647038.1
CDS-3UTR CAA 90 bp CTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTTAAGTGCTGGGGTTaGCCTTGCTTGCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: LGWKDSAGLCLRTTASWRLKCWG*PCLRRD
Trigger: GTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAG...CCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CAA 90 bp AGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTCTTAAGTGCTGGGGTTaGCCTTGCTTGCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: RLEGLCRTLSSHNGFLEALKCWG*PCLRRD
Trigger: GTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAG...AGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CAA 90 bp GGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: GAAGLGWKDSAGLCLRTTEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...CGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp CCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGTGCGTCTGCCCTCTTTaGAGCTGGGCCTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: PFLKSVPPTHPMGVCRKQCVCPL*SWACPG
Trigger: GCCCGGGCAGGCCCAGCTCAAAAGAGGGCAGACGCA...CTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CAA 90 bp AGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTATGTGCCTGGTGAGCTaGCTACTCTGGGCACAGGCA +
Preference number: 5 (lower is better)
Translates to: RLEGLCRTLSSHNGFLEAMCLVS*LLWAQA
Trigger: TGCCTGTGCCCAGAGTAGCAAGCTCACCAGGCACAT...AGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358510.6
CDS CCA 90 bp GAGGAGGTCATGATCCCCTTCTGGAGCTCCCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAATGGCTTCAAGAGGCTCGGGCGAGAA +
Preference number: 5 (lower is better)
Translates to: EEVMIPFWSSQRAVV*FIICKNGFKRLGRE
Trigger: TTCTCGCCCGAGCCTCTTGAAGCCATTCTTACAGATGATGAACCAGACCACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGACCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS CCA 90 bp GAGGAGGTCATGATCCCCTTCTGGAGCTCCCAACGGGCCGTGGTCTaGTTCATCATCTGTAAGAATGGCTTCAAGAGGCTCGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: EEVMIPFWSSQRAVV*FIICKNGFKRLGCG
Trigger: ACCACAGCCGAGCCTCTTGAAGCCATTCTTACAGATGATGAACCAGACCACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGACCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644606.1
CDS-3UTR CAA 90 bp GGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: GFRRARASLMTAMVHGPSEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...AGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp GGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTCTATGGGACTGAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 5 (lower is better)
Translates to: GQGITHDSDGPRALSMGLSVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...CAGTCCCATAGAGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp CATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGCAGAACTCGCATGACTaGGACTTGACCGGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: HLLPISQICSSYPPDGCLQNSHD*DLTGGW
Trigger: CCAGCCCCCGGTCAAGTCCAAGTCATGCGAGTTCTG...CAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CAA 90 bp GGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTGAGCTCTCTGGGTACTAGACCGTCGTCGGACTaGACCGTCATGGGGGACGAT +
Preference number: 5 (lower is better)
Translates to: GSRASIRKLPHILSSLGTRPSSD*TVMGDD
Trigger: ATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCT...AGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp ACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTTACACGTTCTCCGTGTaGGGCATCGCGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: TRGWGLMRISTIQVIRLAYTFSV*GIAAGG
Trigger: GCCCCCGGCCGCGATGCCCAACACGGAGAACGTGTA...AGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CAA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTGCGTCTGCCCTCTTTaGAGCTGGGCCTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: LCLRTTASWRLLSENITNCVCPL*SWACPG
Trigger: GCCCGGGCAGGCCCAGCTCAAAAGAGGGCAGACGCA...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp GGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTTCGCACAACGGCTTCTaGGAGGCTACTGTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: GFRRARASLMTAMVHGPSSHNGF*EATVRK
Trigger: TTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA...AGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp AAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTGAGCTCTCTGGGTGGAAACAGCCTCAGCTaGGCCCAGGAAGAAGCTGGC +
Preference number: 5 (lower is better)
Translates to: KGSRASIRKLPHILSSLGGNSLS*AQEEAG
Trigger: GCCAGCTTCTTCCTGGGCCAAGCTGAGGCTGTTTCC...ACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS TCA 90 bp AAACTTTGCCCGAGGAGAGGACAGCAAAGAAAAATCACCCGAAGTTaGGAGCTGAGCCTCCAAGTTACAGCTCCGCAGCGGGCGAGGGGA +
Preference number: 5 (lower is better)
Translates to: KLCPRRGQQRKITRS*ELSLQVTAPQRARG
Trigger: TCCCCTCGCCCGCTGCGGAGCTGTAACTTGGAGGCTCAGCTCTCAACTTCGGGTGATTTTTCTTTGCTGTCCTCTCCTCGGGCAAAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CAA 90 bp AGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTGGCGAGAATTCCCGTTaGCTTAAGTGCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: RLEGLCRTLSSHNGFLEAGENSR*LKCWGL
Trigger: CAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCC...AGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CAA 90 bp CTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGGGCGAGAATTCCCGTTaGCTTAAGTGCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LGWKDSAGLCLRTTASWRGENSR*LKCWGL
Trigger: CAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCC...CCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CAA 90 bp AAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: KWRCRPRLEGLCRTLSSHEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp GGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: GLGWKDSAGLCLRTTASWKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...CCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp GGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: GAAGLGWKDSAGLCLRTTAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...CGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp CAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACATTGGCCACCACGGACTaGAGCGCGCTGCTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: QRLLGGYCQKTSQTSRMTLATTD*SALLAL
Trigger: CAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCAA...TGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp TTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTTGGCCACCACGGACTaGAGCGCGCTGCTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: FSQNLRALELPSENCHTSLATTD*SALLAL
Trigger: CAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCAA...AGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp TGCTGGGCTCATCTTTACAAATACCCTGCGGGGCATATTCTGCACTCATCCCAGGGGTCGTTCTCGCTCTaGAACTTGGCCACCACGGAC +
Preference number: 5 (lower is better)
Translates to: CWAHLYKYPAGHILHSSQGSFSL*NLATTD
Trigger: GTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCC...CTGGGATGAGTGCAGAATATGCCCCGCAGGGTATTTGTAAAGATGAGCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp GACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAATTCTCCGGGATCAGGTaGGGGTCGTTCTCGCTCTTG +
Preference number: 5 (lower is better)
Translates to: DSAGLCLRTTASWRLLSEFSGIR*GSFSLL
Trigger: CAAGAGCGAGAACGACCCCAACCTGATCCCGGAGAA...TTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACAACTCCTTCTCGAGCTaGATGCGCTTAGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYNSFSS*MRLEKG
Trigger: CCCCTTCTCTAAGCGCATCAAGCTCGAGAAGGAGTT...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp CAAACTCCCGTTCTCCGAGGAGTGCTCCGACGAGGAGGCAAAAGGCGATTGTCTAACTCCTTCTCGAGCTaGATGCGCTTAGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: QTPVLRGVLRRGGKRRLSNSFSS*MRLEKG
Trigger: CCCCTTCTCTAAGCGCATCAAGCTCGAGAAGGAGTT...AGACAATCGCCTTTTGCCTCCTCGTCGGAGCACTCCTCGGAGAACGGGAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp GGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGGGCCCTCTTATAGAAACAAGGGGTaGGGGACTCATGCGCATTTC +
Preference number: 5 (lower is better)
Translates to: GFRRARASLMTAMVHGPSYRNKG*GTHAHF
Trigger: GAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATA...AGAGGGCCCGTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACTATAGAAACAAGGGGTaGGGGACTCATGCGCATTTC +
Preference number: 5 (lower is better)
Translates to: WRCRPRLEGLCRTLSSHNYRNKG*GTHAHF
Trigger: GAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATA...GTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS TCA 90 bp GTCTTGCTTCAGCAAATATTAATAGCGTCAGGGCAGCCTGTGGAGTaGCTGGGAGAGGCCACCACGCAGCTGAAAACTTGCCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: VLLQQILIASGQPVE*LGEATTQLKTCLWG
Trigger: TCCCCAGAGGCAAGTTTTCAGCTGCGTGGTGGCCTCTCCCAGTCACTCCACAGGCTGCCCTGACGCTATTAATATTTGCTGAAGCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 90 bp TGCCCCGGGACAGAGTGCGAAGTAAAAGTGAAGCTTTGGAGCTCTTaGCCCACATGGATTCTCAGCAGCCACCTCCATCCCACCTCAAAC +
Preference number: 5 (lower is better)
Translates to: CPGTECEVKVKLWSS*PTWILSSHLHPTSN
Trigger: GTTTGAGGTGGGATGGAGGTGGCTGCTGAGAATCCATGTGGGTCAAGAGCTCCAAAGCTTCACTTTTACTTCGCACTCTGTCCCGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS GCA 90 bp TCTAGGAGCTGGCAGGGTTGTCCAGACTCTGACAGTGTCAGAAAATaGAGTCACCACGGCTGCTTCACAGGAAGTTACACGCAAGGTCCG +
Preference number: 5 (lower is better)
Translates to: SRSWQGCPDSDSVRK*SHHGCFTGSYTQGP
Trigger: CGGACCTTGCGTGTAACTTCCTGTGAAGCAGCCGTGGTGACTGCATTTTCTGACACTGTCAGAGTCTGGACAACCCTGCCAGCTCCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642824.1
CDS-3UTR CAA 90 bp GTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCTGGGGTTTGCCTTGCTaGCGGCGAGACATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: VFAQRLLGGYCQKTSQTSWGLPC*RRDMVG
Trigger: GCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCA...GCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CAA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTGGGGTTTGCCTTGCTaGCGGCGAGACATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LCLRTTASWRLLSENITNWGLPC*RRDMVG
Trigger: GCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCA...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CAA 90 bp ACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTTGGGGTTTGCCTTGCTaGCGGCGAGACATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: TRGWGLMRISTIQVIRLAWGLPC*RRDMVG
Trigger: GCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCA...AGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CAA 90 bp CTTAAAGTCAAGGTCATGGTGTCATCCCACCACGGGGCTGTGTTTAATTACAGCTGGGGTTTGCCTTGCTaGCGGCGAGACATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LKVKVMVSSHHGAVFNYSWGLPC*RRDMVG
Trigger: GCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCA...GCTGTAATTAAACACAGCCCCGTGGTGGGATGACACCATGACCTTGACTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp AGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: RLEGLCRTLSSHNGFLEAKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...AGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp GACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAGCCAGGAAGGGCGGCTaGCTACCTGGCTGGAATGGT +
Preference number: 5 (lower is better)
Translates to: DSVFAQRLLGGYCQKTSQARKGG*LPGWNG
Trigger: ACCATTCCAGCCAGGTAGCAAGCCGCCCTTCCTGGC...TTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp CTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCTCGCATGACTTGGACTaGACCGGGGGCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LMRISTIQVIRLAGFRRASHDLD*TGGWEG
Trigger: TCCCTCCCAGCCCCCGGTCAAGTCCAAGTCATGCGA...GGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CAA 90 bp GAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCGTCATGGGGGACGATTaGTGCATGTGCGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: EGLCRTLSSHNGFLEATVVMGDD*CMCVFM
Trigger: CATGAAGACGCACATGCACAAATCGTCCCCCATGAC...GACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATGGGTCGTTCTCGCTCTaGAACTTGGCCACCACGGAC +
Preference number: 5 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHGSFSL*NLATTD
Trigger: GTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCC...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp GGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTATCGCACAACGGCTTCTaGGAGGCTACTGTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: GWKDSAGLCLRTTASWRLSHNGF*EATVRK
Trigger: TTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA...TAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp AAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACTATAGAAACAAGGGGTaGGGGACTCATGCGCATTTC +
Preference number: 5 (lower is better)
Translates to: KWRCRPRLEGLCRTLSSHYRNKG*GTHAHF
Trigger: GAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATA...GTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp GGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGTATAGAAACAAGGGGTaGGGGACTCATGCGCATTTC +
Preference number: 5 (lower is better)
Translates to: GLGWKDSAGLCLRTTASWYRNKG*GTHAHF
Trigger: GAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATA...CCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCACCGTTAGTTAGCACCTaGTTTTCACCACCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: WCIRQSCTARCLRGATCAPLVST*FSPPGH
Trigger: GTGCCCTGGTGGTGAAAACAAGGTGCTAACTAACGG...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS TCA 90 bp CTACCCGGCTCATCCAACAGCCTCTTAACCAGTCCACTGCCCCTCTaGGGTCTCCCCGGTTATGGCTTTGCTAAATTTCCATTGCTCTCA +
Preference number: 5 (lower is better)
Translates to: LPGSSNSLLTSPLPL*GLPGYGFAKFPLLS
Trigger: TGAGAGCAATGGAAATTTAGCAAAGCCATAACCGGGGAGACCTCAGAGGGGCAGTGGACTGGTTAAGAGGCTGTTGGATGAGCCGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS GCA 90 bp ATTAGAGCTCCATGTGCAGAACGAGGGGAGGAGAGGCCCCTCCAGTaGAGAAGTTTATCATGTTGCCCAGGCTGGGTGGAAAGTGTTATG +
Preference number: 5 (lower is better)
Translates to: IRAPCAERGEERPLQ*RSLSCCPGWVESVM
Trigger: CATAACACTTTCCACCCAGCCTGGGCAACATGATAAACTTCTGCACTGGAGGGGCCTCTCCTCCCCTCGTTCTGCACATGGAGCTCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS GCA 90 bp GTAGCTTTGCCACATCCAGGCACTTGGCCTGAAGGGTCACCGGCCTaGCTCTTGGGACATCAAATTTGTGCTTACCTAACGAAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: VALPHPGTWPEGSPA*LLGHQICAYLTKAE
Trigger: TTCTGCCTTCGTTAGGTAAGCACAAATTTGATGTCCCAAGAGGCAGGCCGGTGACCCTTCAGGCCAAGTGCCTGGATGTGGCAAAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS-3UTR CAA 90 bp GAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: EGLCRTLSSHNGFLEATVEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...GACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCAAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: WCIRQSCTARCLRGATCAKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp GGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: GLGWKDSAGLCLRTTASWAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...CCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGAGACCGTCGTCGGACTaGACCGTCATGGGGGACGAT +
Preference number: 5 (lower is better)
Translates to: FAQRLLGGYCQKTSQTSRRPSSD*TVMGDD
Trigger: ATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCT...CCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp CGAAAACTGCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGAAACTGCCACACATCTaGAGCTCTCTGGGTACTACG +
Preference number: 5 (lower is better)
Translates to: RKLPHILSSLGTTPNGGVKLPHI*SSLGTT
Trigger: CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTT...CACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000479026.2
ENST00000631857.1
ENST00000647472.1
CDS-3UTR CAA 90 bp CTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTAAACTGCCACACATCTaGAGCTCTCTGGGTACTACG +
Preference number: 5 (lower is better)
Translates to: LEGLCRTLSSHNGFLEATKLPHI*SSLGTT
Trigger: CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTT...AGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCAAGACCAGGATATACTTaGGTGATGAGGGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: WCIRQSCTARCLRGATCARPGYT*VMRGGH
Trigger: GTGTCCTCCCCTCATCACCAAAGTATATCCTGGTCT...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACACAATTATGCATGCAGTaGGCCGGAGACCAAAGGCTG +
Preference number: 5 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTQLCMQ*AGDQRL
Trigger: CAGCCTTTGGTCTCCGGCCAACTGCATGCATAATTG...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp TTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGGAATCCAGCCTAAGTTaGGAGGGCTGCGGGTCCGGA +
Preference number: 5 (lower is better)
Translates to: FAQRLLGGYCQKTSQTSRESSLS*EGCGSG
Trigger: TCCGGACCCGCAGCCCTCCAAACTTAGGCTGGATTC...CCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS GCA 90 bp GGTTGTCCAGACTCTGACAGTGTCAGAAAATGCAGTCACCACGGCTaGTTCACAGGAAGTTACACGCAAGGTCCGCACACAGTCAGTTTC +
Preference number: 5 (lower is better)
Translates to: GCPDSDSVRKCSHHG*FTGSYTQGPHTVSF
Trigger: GAAACTGACTGTGTGCGGACCTTGCGTGTAACTTCCTGTGAAGCAGCCGTGGTGACTGCATTTTCTGACACTGTCAGAGTCTGGACAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642824.1
CDS-3UTR CAA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACCGCAGGGAAGATGAATaGTGGGAGAGCCGTCATGGC +
Preference number: 5 (lower is better)
Translates to: LCLRTTASWRLLSENITNRREDE*WESRHG
Trigger: GCCATGACGGCTCTCCCACAATTCATCTTCCCTGCG...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000642439.1
CDS-3UTR CAA 90 bp GATTTTCCCCACTTAGGTTCACGGCCTGTATGTGAATCTACAGCACACAGGTGTCGCAGGGAAGATGAATaGTGGGAGAGCCGTCATGGC +
Preference number: 5 (lower is better)
Translates to: DFPHLGSRPVCESTAHRCRREDE*WESRHG
Trigger: GCCATGACGGCTCTCCCACAATTCATCTTCCCTGCG...ACACCTGTGTGCTGTAGATTCACATACAGGCCGTGAACCTAAGTGGGGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000359629.10
CDS-3UTR CAA 90 bp CAAGCAGGTGCACTCCCAGTGTTCAGAACTGGAATTCATTTGTCTTGGAAGAAATGGGGTTTGCCTTGCTaGCGGCGAGACATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: QAGALPVFRTGIHLSWKKWGLPC*RRDMVG
Trigger: GCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCA...TTTCTTCCAAGACAAATGAATTCCAGTTCTGAACACTGGGAGTGCACCTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CAA 90 bp CTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGGGCGAGAATTCCCGTTaGCTTAAGTGCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LKSVPPTHPMGVCRKQVQGENSR*LKCWGL
Trigger: CAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCC...CTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CAA 90 bp CAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCAAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: QGFGSPKTTNPLPPALASKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...TGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR CAA 90 bp ATCCGAAAACTGCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATGGGGGTAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: IRKLPHILSSLGTTPNGGKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...ACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR CAA 90 bp GCTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: AGRTLQDSVFAQRLLGGYAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...GTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp AGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAGCGATGGTCCACGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: RLAGFRRARASLMTAMVHAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...GTGGACCATCGCTGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp CTGGAAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 5 (lower is better)
Translates to: LEGLCRTLSSHNGFLEATSVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...AGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp CTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGGTCATGGGGGACGATTaGTGCATGTGCGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: LKSVPPTHPMGVCRKQVQVMGDD*CMCVFM
Trigger: CATGAAGACGCACATGCACAAATCGTCCCCCATGAC...CTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CAA 90 bp AAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTTGAGCTCTCTGGGTTCGCACAACGGCTTCTaGGAGGCTACTGTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: KGSRASIRKLPHILSSLGSHNGF*EATVRK
Trigger: TTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA...ACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479026.2
ENST00000647472.1
CDS-3UTR CAA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCACGTGGGAACCTGGATTaGCAGGCTTTCCAATTACTA +
Preference number: 5 (lower is better)
Translates to: WCIRQSCTARCLRGATCARGNLD*QAFQLL
Trigger: TAGTAATTGGAAAGCCTGCAAATCCAGGTTCCCACG...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp TACATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCGGCAAGCCCTTAACCTaGGTAAGCCTCAATCTCCAC +
Preference number: 5 (lower is better)
Translates to: YISCPFLKSVPPTHPMGVGKPLT*VSLNLH
Trigger: GTGGAGATTGAGGCTTACCAAGGTTAAGGGCTTGCC...GACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS TCA 90 bp AATGCAGGTCACTATCGACAGCTCATGCTTTTGATGCTTCGTCTGTaGCAGTTGTTGGGTTGCCCTTCTAGGAGCTGGCAGGGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: NAGHYRQLMLLMLRL*QLLGCPSRSWQGCP
Trigger: TGGACAACCCTGCCAGCTCCTAGAAGGGCAACCCAACAACTGTCACAGACGAAGCATCAAAAGCATGAGCTGTCGATAGTGACCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642824.1
CDS TCA 90 bp CTGGTGCAGTCTCAGTATCTCCGCACACACCTCAAGCGCGGGTCCTaGGATTCATTCTGTGTCCACAAGCTTACACTTTTTACTTTGGGG +
Preference number: 5 (lower is better)
Translates to: LVQSQYLRTHLKRGS*DSFCVHKLTLFTLG
Trigger: CCCCAAAGTAAAAAGTGTAAGCTTGTGGACACAGAATGAATCTCAGGACCCGCGCTTGAGGTGTGTGCGGAGATACTGAGACTGCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647038.1
CDS-3UTR CAA 90 bp TCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTCTTAAGTGCTGGGGTTaGCCTTGCTTGCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: SVFAQRLLGGYCQKTSQTLKCWG*PCLRRD
Trigger: GTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAG...AGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000642439.1
ENST00000646249.1
CDS-3UTR CAA 90 bp CAAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACCTTAAGTGCTGGGGTTaGCCTTGCTTGCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: QIFSELKGSRASIRKLPHLKCWG*PCLRRD
Trigger: GTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAG...GTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp TGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAAGGCGAGAATTCCCGTTaGCTTAAGTGCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: CPFLKSVPPTHPMGVCRKGENSR*LKCWGL
Trigger: CAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCC...TTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CAA 90 bp GGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTAGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: GFGSPKTTNPLPPALASLEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...TAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR CAA 90 bp TACATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: YISCPFLKSVPPTHPMGVEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...GACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TACATCTCCTGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: YISCPFLKSVPPTHPMGVKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...GACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCAGGAGATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp CGAAAACTGCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATGGGGGTGTGGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: RKLPHILSSLGTTPNGGVAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...CACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR CAA 90 bp GACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 5 (lower is better)
Translates to: DSAGLCLRTTASWRLLSESVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...TTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAATTGGCCACCACGGACTaGAGCGCGCTGCTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQLATTD*SALLAL
Trigger: CAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCAA...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCTTCTCGCTCTTGAACTaGGCCACCACGGACTTGAGC +
Preference number: 5 (lower is better)
Translates to: GWGLMRISTIQVIRLAGFFSLLN*ATTDLS
Trigger: GCTCAAGTCCGTGGTGGCCAAGTTCAAGAGCGAGAA...GAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CAA 90 bp GCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGTTCTCGCTCTTGAACTaGGCCACCACGGACTTGAGC +
Preference number: 5 (lower is better)
Translates to: AQRLLGGYCQKTSQTSRMFSLLN*ATTDLS
Trigger: GCTCAAGTCCGTGGTGGCCAAGTTCAAGAGCGAGAA...CATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAATACACGTTCTCCGTGTaGGGCATCGCGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKYTFSV*GIAAGG
Trigger: GCCCCCGGCCGCGATGCCCAACACGGAGAACGTGTA...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACGGAGGCAAAAGGCGATaGTCTGGAGTCTCCGAAGCT +
Preference number: 5 (lower is better)
Translates to: LCLRTTASWRLLSENITNGGKRR*SGVSEA
Trigger: AGCTTCGGAGACTCCAGACAATCGCCTTTTGCCTCC...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp TTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGGGAGGCAAAAGGCGATaGTCTGGAGTCTCCGAAGCT +
Preference number: 5 (lower is better)
Translates to: FAQRLLGGYCQKTSQTSRGGKRR*SGVSEA
Trigger: AGCTTCGGAGACTCCAGACAATCGCCTTTTGCCTCC...CCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAATGCGTCTGCCCTCTTTaGAGCTGGGCCTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKCVCPL*SWACPG
Trigger: GCCCGGGCAGGCCCAGCTCAAAAGAGGGCAGACGCA...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCAAATCTTCCAGCAGCATaGCATCAGATCCACTCACAT +
Preference number: 5 (lower is better)
Translates to: WCIRQSCTARCLRGATCANLPAA*HQIHSH
Trigger: ATGTGAGTGGATCTGATGCAATGCTGCTGGAAGATT...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACACAGAGCAAATGGGACTaGAAGGCCAAATTTCCCCTA +
Preference number: 5 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTQSKWD*KAKFPL
Trigger: TAGGGGAAATTTGGCCTTCAAGTCCCATTTGCTCTG...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTCTGACATTCAGAAAGTaGTGGTGTCCACCCACCACC +
Preference number: 5 (lower is better)
Translates to: HQPHLIHGERVMQTSADILTFRK*WCPPTT
Trigger: GGTGGTGGGTGGACACCACAACTTTCTGAATGTCAG...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp GCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCAAGGAGGGAGGGCTGTaGAATACGTGTGTGTATTTT +
Preference number: 5 (lower is better)
Translates to: ARLWISEDDKSPSACSCFKEGGL*NTCVYF
Trigger: AAAATACACACACGTATTCAACAGCCCTCCCTCCTT...GAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp CACATCTTCCAGCTCCAACCACCACAGCTCACAGTCATTCTTGTCTTCTGTAACGGCGAGAATTCCCGTTaGCTTAAGTGCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: HIFQLQPPQLTVILVFCNGENSR*LKCWGL
Trigger: CAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCC...GTTACAGAAGACAAGAATGACTGTGAGCTGTGGTGGTTGGAGCTGGAAGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CAA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: HQPHLIHGERVMQTSADIEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp CGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCAGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: RISTIQVIRLAGFRRARAEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...TGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp AGACTTGGAATTGTGCAGACGTGCTTTAGAGAAATGGGCTGGGGGTACACACACGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: RLGIVQTCFREMGWGYTHEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...GTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACGTCTGCACAATTCCAAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTTGGCCACCACGGACTaGAGCGCGCTGCTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLLATTD*SALLAL
Trigger: CAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCAA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAAACTCCTTCTCGAGCTaGATGCGCTTAGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: DSVFAQRLLGGYCQKTSQNSFSS*MRLEKG
Trigger: CCCCTTCTCTAAGCGCATCAAGCTCGAGAAGGAGTT...TTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356842.9
ENST00000358510.6
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTACACGTTCTCCGTGTaGGGCATCGCGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLYTFSV*GIAAGG
Trigger: GCCCCCGGCCGCGATGCCCAACACGGAGAACGTGTA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTGCGTCTGCCCTCTTTaGAGCTGGGCCTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLCVCPL*SWACPG
Trigger: GCCCGGGCAGGCCCAGCTCAAAAGAGGGCAGACGCA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TGCCCATTTCTCAAATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAATCGCACAACGGCTTCTaGGAGGCTACTGTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: CPFLKSVPPTHPMGVCRKSHNGF*EATVRK
Trigger: TTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA...TTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATTTGAGAAATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp CCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAATCTCGCACAACGGCTTCTaGGAGGCTACTGTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: PPTHPMGVCRKQVQKYKISHNGF*EATVRK
Trigger: TTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA...GATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATTCGCACAACGGCTTCTaGGAGGCTACTGTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHSHNGF*EATVRK
Trigger: TTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TCAGTTCTGAATAACATGCTGCCAGCCCTATCTGGAAAAGGGTGTGCAAGGCGCTGTACAGGAACAGACTaGGCACATAGTGCTTTGTGC +
Preference number: 5 (lower is better)
Translates to: SVLNNMLPALSGKGCARRCTGTD*AHSALC
Trigger: GCACAAAGCACTATGTGCCAAGTCTGTTCCTGTACA...GCGCCTTGCACACCCTTTTCCAGATAGGGCTGGCAGCATGTTATTCAGAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp GATTTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTACAACTCCTTACTGCTaGGCTACAGCACCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: DLARLWISEDDKSPSACSTTPYC*ATAPLK
Trigger: TTTCAGAGGTGCTGTAGCCAAGCAGTAAGGAGTTGT...AGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp AAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTTAATTCCTTTTCCCTaGAGCTGCCGAGAAACCCAC +
Preference number: 5 (lower is better)
Translates to: KALDLRRRQIPFRLLLLHLIPFP*SCRETH
Trigger: GTGGGTTTCTCGGCAGCTCAAGGGAAAAGGAATTAA...ATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS GCA 90 bp CCGCACACAGTCAGTTTCCCTGTAGCCCAGAAGCCTGATGAAATCTaGACTCACATTCAGCTGAAAATAGCTCGAATTCCAACCCTCTCT +
Preference number: 5 (lower is better)
Translates to: PHTVSFPVAQKPDEI*THIQLKIARIPTLS
Trigger: AGAGAGGGTTGGAATTCGAGCTATTTTCAGCTGAATGTGAGTGCAGATTTCATCAGGCTTCTGGGCTACAGGGAAACTGACTGTGTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642824.1
CDS CCA 90 bp TCTCACCATTCGATATTTATTGTAGCTTTGCCACATCCAGGCACTTaGCCTGAAGGGTCACCGGCCTGCCTCTTGGGACATCAAATTTGT +
Preference number: 5 (lower is better)
Translates to: SHHSIFIVALPHPGT*PEGSPACLLGHQIC
Trigger: ACAAATTTGATGTCCCAAGAGGCAGGCCGGTGACCCTTCAGGCCAAGTGCCTGGATGTGGCAAAGCTACAATAAATATCGAATGGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS-3UTR CAA 90 bp GCCACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATTTGGGGTTTGCCTTGCTaGCGGCGAGACATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: ATKSIYLKNRIRRAILCIWGLPC*RRDMVG
Trigger: GCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCA...AATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CAA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACATGGGGTTTGCCTTGCTaGCGGCGAGACATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTWGLPC*RRDMVG
Trigger: GCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCA...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GAATTCATTTGTCTTGGAAGAAAGTGTTCTCCTGGACGGTTCTGCACAGAATTCCTTAAGTGCTGGGGTTaGCCTTGCTTGCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: EFICLGRKCSPGRFCTEFLKCWG*PCLRRD
Trigger: GTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAG...GAATTCTGTGCAGAACCGTCCAGGAGAACACTTTCTTCCAAGACAAATGAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CAA 90 bp GGCTGTCATGGACAGTCACATAGAGTAATAGAGAAAGCACTTCACAACTCCTTACTTAAGTGCTGGGGTTaGCCTTGCTTGCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: GCHGQSHRVIEKALHNSLLKCWG*PCLRRD
Trigger: GTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAG...TAAGGAGTTGTGAAGTGCTTTCTCTATTACTCTATGTGACTGTCCATGACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: TIQVIRLAGFRRARASLMEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp CCGACAAGCAGGTGCACTCCCAGTGTTCAGAACTGGAATTCATTTGTCTTGGAAGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: PTSRCTPSVQNWNSFVLEEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...TTCCAAGACAAATGAATTCCAGTTCTGAACACTGGGAGTGCACCTGCTTGTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CAA 90 bp TTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAAAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: FLLPTRWVSVGNRYRSTKKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...TTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp ATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: IQVIRLAGFRRARASLMTKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...TGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: SAGLCLRTTASWRLLSENAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...GTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp GGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTAGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: GFGSPKTTNPLPPALASLAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...TAATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489183.1
ENST00000643716.1
CDS-3UTR CAA 90 bp GCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: AGLCLRTTASWRLLSENIAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...GATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp AATCTGTTCCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 5 (lower is better)
Translates to: NLFLLPTRWVSVGNRYRSSVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...ACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGGAACAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAATCGCATGACTTGGACTaGACCGGGGGCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQSHDLD*TGGWEG
Trigger: TCCCTCCCAGCCCCCGGTCAAGTCCAAGTCATGCGA...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp AAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATTCTCGCTCTTGAACTaGGCCACCACGGACTTGAGC +
Preference number: 5 (lower is better)
Translates to: KFSQNLRALELPSENCHTFSLLN*ATTDLS
Trigger: GCTCAAGTCCGTGGTGGCCAAGTTCAAGAGCGAGAA...TGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp ATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTTCTCCGGGATCAGGTaGGGGTCGTTCTCGCTCTTG +
Preference number: 5 (lower is better)
Translates to: MYRNKGLGTHAHFHNTGNFSGIR*GSFSLL
Trigger: CAAGAGCGAGAACGACCCCAACCTGATCCCGGAGAA...ATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356842.9
CDS-3UTR CAA 90 bp AAGGACTCTGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAAGATTGCTACAGTTCTaGAAGACTTTCCCACAGTAC +
Preference number: 5 (lower is better)
Translates to: KDSAGLCLRTTASWRLLSRLLQF*KTFPQY
Trigger: GTACTGTGGGAAAGTCTTCAAGAACTGTAGCAATCT...TGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCAGAGTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358510.6
CDS-3UTR CAA 90 bp ACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTAAACTGCCACACATCTaGAGCTCTCTGGGTACTACG +
Preference number: 5 (lower is better)
Translates to: TRGWGLMRISTIQVIRLAKLPHI*SSLGTT
Trigger: CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTT...AGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp GTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAAACTGCCACACATCTaGAGCTCTCTGGGTACTACG +
Preference number: 5 (lower is better)
Translates to: VFAQRLLGGYCQKTSQTSKLPHI*SSLGTT
Trigger: CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTT...GCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGTCGCACAACGGCTTCTaGGAGGCTACTGTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: TIQVIRLAGFRRARASLMSHNGF*EATVRK
Trigger: TTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGA...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TGCAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATTATAGAAACAAGGGGTaGGGGACTCATGCGCATTTC +
Preference number: 5 (lower is better)
Translates to: CRTLSSHNGFLEATVRKHYRNKG*GTHAHF
Trigger: GAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATA...ATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TCAGTTCTGAATAACATGCTGCCAGCCCTATCTGGAAAAGGGTGTGCAAGGCGCTTAACTCTCTTATCCTaGGGCCCTGCTCAGAAATGT +
Preference number: 5 (lower is better)
Translates to: SVLNNMLPALSGKGCARRLTLLS*GPAQKC
Trigger: ACATTTCTGAGCAGGGCCCAAGGATAAGAGAGTTAA...GCGCCTTGCACACCCTTTTCCAGATAGGGCTGGCAGCATGTTATTCAGAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp TGGTGCATACGTCAATCGTGCACTGCGCGTTGCCTTAGAGGAGCAACCTGTGCAAGAAGAATCCTTTGCTaGAATGCTAACTCACACCTT +
Preference number: 5 (lower is better)
Translates to: WCIRQSCTARCLRGATCARRILC*NANSHL
Trigger: AAGGTGTGAGTTAGCATTCAAGCAAAGGATTCTTCT...TGCACAGGTTGCTCCTCTAAGGCAACGCGCAGTGCACGATTGACGTATGCACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp GCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGCAGAAGTTTATCATGTaGCCCAGGCTGGGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: AQRLLGGYCQKTSQTSRMQKFIM*PRLGGK
Trigger: CTTTCCACCCAGCCTGGGCAACATGATAAACTTCTG...CATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS-3UTR CAA 90 bp AACATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATATGCGCTCGGGAAACTTaGCCCGAGGAGAGGACAGCA +
Preference number: 5 (lower is better)
Translates to: NIECIETRGWGLMRISTICARET*PEERTA
Trigger: TGCTGTCCTCTCCTCGGGCAAAGTTTCCCGAGCGCA...TATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CAA 90 bp ATAAAATGGCGCTGCAGGCCTAGGCTGGAAGGACTCTGCAGGACTCTGTCTTCGTCAGTTAAACAGAGTTaGGTGAAATTAGCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: IKWRCRPRLEGLCRTLSSSVKQS*VKLALD
Trigger: GTCCAGAGCTAATTTCACCAAACTCTGTTTAACTGA...CGAAGACAGAGTCCTGCAGAGTCCTTCCAGCCTAGGCCTGCAGCGCCATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CAA 90 bp TTAGCAAGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCGACAGACACTGTGTTTaGTCTTTTAAACGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: LARLWISEDDKSPSACSCDRHCV*SFKRAA
Trigger: AGCTGCTCGTTTAAAAGACAAAACACAGTGTCTGTC...GCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCTTGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTGGGGTTTGCCTTGCTaGCGGCGAGACATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLWGLPC*RRDMVG
Trigger: GCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp AAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACAGGCGAGAATTCCCGTTaGCTTAAGTGCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: KFSQNLRALELPSENCHTGENSR*LKCWGL
Trigger: CAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCC...TGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp GGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: GLMRISTIQVIRLAGFRRKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...CCTTCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp ATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGACAAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 5 (lower is better)
Translates to: IQVIRLAGFRRARASLMTSVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...TGTCATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 5 (lower is better)
Translates to: TIQVIRLAGFRRARASLMSVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGCCAGGAAGGGCGGCTaGCTACCTGGCTGGAATGGT +
Preference number: 5 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLARKGG*LPGWNG
Trigger: ACCATTCCAGCCAGGTAGCAAGCCGCCCTTCCTGGC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTCGCATGACTTGGACTaGACCGGGGGCTGGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLSHDLD*TGGWEG
Trigger: TCCCTCCCAGCCCCCGGTCAAGTCCAAGTCATGCGA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACACAGAACTCGCATGACTaGGACTTGACCGGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTQNSHD*DLTGGW
Trigger: CCAGCCCCCGGTCAAGTCCAAGTCATGCGAGTTCTG...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAAGACCGTCGTCGGACTaGACCGTCATGGGGGACGAT +
Preference number: 5 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTRPSSD*TVMGDD
Trigger: ATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCT...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAGGGTCGTTCTCGCTCTaGAACTTGGCCACCACGGAC +
Preference number: 5 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQGSFSL*NLATTD
Trigger: GTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCC...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAGGGTCGTTCTCGCTCTaGAACTTGGCCACCACGGAC +
Preference number: 5 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTGSFSL*NLATTD
Trigger: GTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCC...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp ACAAGGGGTTGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTTATAGAAACAAGGGGTaGGGGACTCATGCGCATTTC +
Preference number: 5 (lower is better)
Translates to: TRGWGLMRISTIQVIRLAYRNKG*GTHAHF
Trigger: GAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATA...AGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000479026.2
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp AAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACATCTCTGAGCTCCCCCTaGGGTTACCTGCTATGTGTT +
Preference number: 5 (lower is better)
Translates to: KFSQNLRALELPSENCHTSLSSP*GYLLCV
Trigger: AACACATAGCAGGTAACCCAAGGGGGAGCTCAGAGA...TGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS-3UTR CAA 90 bp TCAGTTCTGAATAACATGCTGCCAGCCCTATCTGGAAAAGGGTGTGCAAGGCGCCCTGACCAATTCCGTTaGACACTAATGTTACTCTAC +
Preference number: 5 (lower is better)
Translates to: SVLNNMLPALSGKGCARRPDQFR*TLMLLY
Trigger: GTAGAGTAACATTAGTGTCAAACGGAATTGGTCAGG...GCGCCTTGCACACCCTTTTCCAGATAGGGCTGGCAGCATGTTATTCAGAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp CCTCCTACCCACCCGATGGGTGTCTGTAGGAAACAGGTACAGAAGTACAAAATCTGCAATCAGGGTTATTaGTCATGGAAAAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: PPTHPMGVCRKQVQKYKICNQGY*SWKSHR
Trigger: CCTGTGGCTTTTCCATGACAAATAACCCTGATTGCA...GATTTTGTACTTCTGTACCTGTTTCCTACAGACACCCATCGGGTGGGTAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CAA 90 bp ATTTTCCTTCCAGTCACAAGACAACACATGGAAATGGTCATTCCCACATCCTGCGCCTATATGGCCACTTaGCCTCTGACACGTCACCAA +
Preference number: 5 (lower is better)
Translates to: IFLPVTRQHMEMVIPTSCAYMAT*PLTRHQ
Trigger: TTGGTGACGTGTCAGAGGCAAAGTGGCCATATAGGC...GCAGGATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGACTGGAAGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp CGTGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCTGTCAAACCAACCTTTaGAAATTTCCAACATGCCCT +
Preference number: 5 (lower is better)
Translates to: RALEKWAGGTHTAVFQNFCQTNL*KFPTCP
Trigger: AGGGCATGTTGGAAATTTCAAAAGGTTGGTTTGACA...GAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp TGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCGCCTTGTTGTGCGCCCATaGAATATCTTAGACATCTTA +
Preference number: 5 (lower is better)
Translates to: CFREMGWGYTHSRLPELRLVVRP*NILDIL
Trigger: TAAGATGTCTAAGATATTCAATGGGCGCACAACAAG...GCGAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp AGGCTTTGGATCTCCGAAGACGACAAATCCCCTTCCGCCTGCTCTTGCTTCATTTATTTGACACACATATaGATGAACTGGGCCCACACA +
Preference number: 5 (lower is better)
Translates to: RLWISEDDKSPSACSCFIYLTHI*MNWAHT
Trigger: TGTGTGGGCCCAGTTCATCAATATGTGTGTCAAATA...AATGAAGCAAGAGCAGGCGGAAGGGGATTTGTCGTCTTCGGAGATCCAAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp TGCTTTAGAGAAATGGGCTGGGGGTACACACACAGCCGTCTTCCAGAACTTCGCTCTGAGGGTGGATATTaGACACACATATTGATGAAC +
Preference number: 5 (lower is better)
Translates to: CFREMGWGYTHSRLPELRSEGGY*THILMN
Trigger: GTTCATCAATATGTGTGTCAAATATCCACCCTCAGA...GCGAAGTTCTGGAAGACGGCTGTGTGTGTACCCCCAGCCCATTTCTCTAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS TCA 90 bp GATCCTGGTATTCTTAGCAGGTTAAAGGGGTTATTGTCTGCAATATaGATCCCATGGAGAGGTGGCTGGGAAGGACATTCTGCACCTAGT +
Preference number: 5 (lower is better)
Translates to: DPGILSRLKGLLSAI*IPWRGGWEGHSAPS
Trigger: ACTAGGTGCAGAATGTCCTTCCCAGCCACCTCTCCATGGGATTCATATTGCAGACAATAACCCCTTTAACCTGCTAAGAATACCAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000477659.1
ENST00000642384.2
ENST00000643459.1
ENST00000645455.1
CDS TCA 90 bp TCAGATTTTCTGCAAATGCAGGTCACTATCGACAGCTCATGCTTTTaGTGCTTCGTCTGTGACAGTTGTTGGGTTGCCCTTCTAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SDFLQMQVTIDSSCF*CFVCDSCWVALLGA
Trigger: AGCTCCTAGAAGGGCAACCCAACAACTGTCACAGACGAAGCATCAAAAGCATGAGCTGTCGATAGTGACCTGCATTTGCAGAAAATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642824.1
CDS TCA 90 bp GATGAAACAAATAAAGGGCTGACCTATAATGCGTCTGATTCATTGTaGCACACACAACTCCCTGCGCTAATCTCTGCCCAGCCAACGCAT +
Preference number: 5 (lower is better)
Translates to: DETNKGLTYNASDSL*HTQLPALISAQPTH
Trigger: ATGCGTTGGCTGGGCAGAGATTAGCGCAGGGAGTTGTGTGTGTCACAATGAATCAGACGCATTATAGGTCAGCCCTTTATTTGTTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS-3UTR CAA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAACGCAGGGAAGATGAATaGTGGGAGAGCCGTCATGGC +
Preference number: 5 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQRREDE*WESRHG
Trigger: GCCATGACGGCTCTCCCACAATTCATCTTCCCTGCG...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TTATTTGGCTATCTTTTCACTAAGCTAGGTAATCTAGCCAGAAGGTGGATAGGTCTTAAGTGCTGGGGTTaGCCTTGCTTGCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: LFGYLFTKLGNLARRWIGLKCWG*PCLRRD
Trigger: GTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAG...ACCTATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CAA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAACTTAAGTGCTGGGGTTaGCCTTGCTTGCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKLKCWG*PCLRRD
Trigger: GTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAG...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TCAGAAATACTTCTTTCCATCTGGGTCATGTTTTGGAGGATCCCTTCCAGTGAGAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: SEILLSIWVMFWRIPSSEKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...CTCACTGGAAGGGATCCTCCAAAACATGACCCAGATGGAAAGAAGTATTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CAA 90 bp ACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGGGCCAGGGCATCACTCATGGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: TIQVIRLAGFRRARASLMAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...CATGAGTGATGCCCTGGCCCTTCTGAAACCAGCCAACCTAATTACCTGTATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp CTTAAAGTCAAGGTCATGGTGTCATCCCACCACGGGGCTGTGTTTAATTACAGCGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: LKVKVMVSSHHGAVFNYSAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...GCTGTAATTAAACACAGCCCCGTGGTGGGATGACACCATGACCTTGACTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp CAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTAGCAGGATGACAAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 5 (lower is better)
Translates to: QRLLGGYCQKTSQTSRMTSVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...TGTCATCCTGCTAGTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TGGGGACTCATGCGCATTTCCACAATACAGGTAATTAGGTTGGCTGGTTTCAGAAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 5 (lower is better)
Translates to: WGLMRISTIQVIRLAGFRSVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...TCTGAAACCAGCCAACCTAATTACCTGTATTGTGGAAATGCGCATGAGTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCAGAACTCGCATGACTaGGACTTGACCGGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLQNSHD*DLTGGW
Trigger: CCAGCCCCCGGTCAAGTCCAAGTCATGCGAGTTCTG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCAGACCGTCGTCGGACTaGACCGTCATGGGGGACGAT +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLRPSSD*TVMGDD
Trigger: ATCGTCCCCCATGACGGTCAAGTCCGACGACGGTCT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTATTCTCGCTCTTGAACTaGGCCACCACGGACTTGAGC +
Preference number: 5 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVFSLLN*ATTDLS
Trigger: GCTCAAGTCCGTGGTGGCCAAGTTCAAGAGCGAGAA...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACATTCTCCGGGATCAGGTaGGGGTCGTTCTCGCTCTTG +
Preference number: 5 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTFSGIR*GSFSLL
Trigger: CAAGAGCGAGAACGACCCCAACCTGATCCCGGAGAA...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp AAATTTTCTCAGAACTTAAGGGCTCTCGAGCTTCCATCCGAAAACTGCCACACAAAACTGCCACACATCTaGAGCTCTCTGGGTACTACG +
Preference number: 5 (lower is better)
Translates to: KFSQNLRALELPSENCHTKLPHI*SSLGTT
Trigger: CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTT...TGTGTGGCAGTTTTCGGATGGAAGCTCGAGAGCCCTTAAGTTCTGAGAAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000479026.2
ENST00000631857.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TCCTCCATTCGGCACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATTAAAAGGACAGCAGTaGTTTTCAAAGATCCAAGAG +
Preference number: 5 (lower is better)
Translates to: SSIRHQPHLIHGERVMQTLKGQQ*FSKIQE
Trigger: CTCTTGGATCTTTGAAAACAACTGCTGTCCTTTTAA...TGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTGCCGAATGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp GGTTCTGCACAGAATTCATTCACAGAGCATGTCTTGGATATACAGCTGACTAGATTGTGTAAAGCCACCTaGCATGTCAGCCCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: GSAQNSFTEHVLDIQLTRLCKAT*HVSPSS
Trigger: GGAGCTTGGGCTGACATGCAAGGTGGCTTTACACAA...TCTAGTCAGCTGTATATCCAAGACATGCTCTGTGAATGAATTCTGTGCAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CAA 90 bp CTTAAAGTCAAGGTCATGGTGTCATCCCACCACGGGGCTGTGTTTAATTACAGCGAGTCAAACAAGTCATaGGCTGAACTGCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: LKVKVMVSSHHGAVFNYSESNKS*AELQMP
Trigger: AGGCATTTGCAGTTCAGCCAATGACTTGTTTGACTC...GCTGTAATTAAACACAGCCCCGTGGTGGGATGACACCATGACCTTGACTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAGACGTCCCTGCGAACTaGAACGTCAGGAGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQDVPAN*NVRSLD
Trigger: ATCCAGACTCCTGACGTTCAAGTTCGCAGGGACGTC...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCCTTAAGTGCTGGGGTTaGCCTTGCTTGCGGCGAGAC +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLLKCWG*PCLRRD
Trigger: GTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAG...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TTACATTGTGTTATAGCAGAAACAGTGGAGTCTGGACTGGACATTTGTAAGGGTGGCGAGAATTCCCGTTaGCTTAAGTGCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: LHCVIAETVESGLDICKGGENSR*LKCWGL
Trigger: CAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCC...ACCCTTACAAATGTCCAGTCCAGACTCCACTGTTTCTGCTATAACACAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS-3UTR CAA 90 bp TTGCAAGAGAAACCATGCACTGGTGAATGGCTGTTTGCAAGTTGTACATGTGTAGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: LQEKPCTGEWLFASCTCVEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...TACACATGTACAACTTGCAAACAGCCATTCACCAGTGCATGGTTTCTCTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000631857.1
ENST00000647472.1
CDS-3UTR CAA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAGTCATGGGGGACGATTaGTGCATGTGCGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVVMGDD*CMCVFM
Trigger: CATGAAGACGCACATGCACAAATCGTCCCCCATGAC...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAATTCTCGCTCTTGAACTaGGCCACCACGGACTTGAGC +
Preference number: 5 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQFSLLN*ATTDLS
Trigger: GCTCAAGTCCGTGGTGGCCAAGTTCAAGAGCGAGAA...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAGGAGGCAAAAGGCGATaGTCTGGAGTCTCCGAAGCT +
Preference number: 5 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTGGKRR*SGVSEA
Trigger: AGCTTCGGAGACTCCAGACAATCGCCTTTTGCCTCC...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCATGTGCCTGGTGAGCTaGCTACTCTGGGCACAGGCA +
Preference number: 5 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLMCLVS*LLWAQA
Trigger: TGCCTGTGCCCAGAGTAGCAAGCTCACCAGGCACAT...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp CACCAGCCGCATTTAATCCATGGTGAACGGGTCATGCAGACATCAGCTGACATTATGGTATACCTTGAGTaGGTGAAGGAGAATACTTCA +
Preference number: 5 (lower is better)
Translates to: HQPHLIHGERVMQTSADIMVYLE*VKENTS
Trigger: TGAAGTATTCTCCTTCACCAACTCAAGGTATACCAT...AATGTCAGCTGATGTCTGCATGACCCGTTCACCATGGATTAAATGCGGCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp TCAGTTCTGAATAACATGCTGCCAGCCCTATCTGGAAAAGGGTGTGCAAGGCGCAAAACAGCTTTTTCATaGGCTTGGAGTGGCATTAAT +
Preference number: 5 (lower is better)
Translates to: SVLNNMLPALSGKGCARRKTAFS*AWSGIN
Trigger: ATTAATGCCACTCCAAGCCAATGAAAAAGCTGTTTT...GCGCCTTGCACACCCTTTTCCAGATAGGGCTGGCAGCATGTTATTCAGAACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS CCA 90 bp GCCTTACACTTCTGTTCATTTTCCTTCCAGTCACAAGACAACACATaGAAATGGTCATTCCCACATCCTGCTGCTATGTGTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: ALHFCSFSFQSQDNT*KWSFPHPAAMCSCL
Trigger: CAAACAGGAACACATAGCAGCAGGATGTGGGAATGACCATTTCCATGTGTTGTCTTGTGACTGGAAGGAAAATGAACAGAAGTGTAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489183.1
CDS CCA 90 bp TGGTTCATCATCTGTAAGAATGGCTTCAAGAGGCTCGGCTGTGGTTaGAGAAACAAAAGCACAATTATTAGAGTGCCAGAGAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: WFIICKNGFKRLGCG*RNKSTIIRVPERTE
Trigger: TTCTGTCCTCTCTGGCACTCTAATAATTGTGCTTTTGTTTCTCCAACCACAGCCGAGCCTCTTGAAGCCATTCTTACAGATGATGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644606.1
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGACGTCCCTGCGAACTaGAACGTCAGGAGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLDVPAN*NVRSLD
Trigger: ATCCAGACTCCTGACGTTCAAGTTCGCAGGGACGTC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAGGCGAGAATTCCCGTTaGCTTAAGTGCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTGENSR*LKCWGL
Trigger: CAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCC...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp CAAGCAGGTGCACTCCCAGTGTTCAGAACTGGAATTCATTTGTCTTGGAAGAAAGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: QAGALPVFRTGIHLSWKKAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...TTTCTTCCAAGACAAATGAATTCCAGTTCTGAACACTGGGAGTGCACCTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CAA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAGTCATGGGGGACGATTaGTGCATGTGCGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQVMGDD*CMCVFM
Trigger: CATGAAGACGCACATGCACAAATCGTCCCCCATGAC...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp AACCTGAAGAGCGGTGTGTATCCAAGGCATAGAATTTCCACTACCATTTTTAAAAACTCCTTCTCGAGCTaGATGCGCTTAGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: NLKSGVYPRHRISTTIFKNSFSS*MRLEKG
Trigger: CCCCTTCTCTAAGCGCATCAAGCTCGAGAAGGAGTT...TTTAAAAATGGTAGTGGAAATTCTATGCCTTGGATACACACCGCTCTTCAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAAACTCCTTCTCGAGCTaGATGCGCTTAGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTNSFSS*MRLEKG
Trigger: CCCCTTCTCTAAGCGCATCAAGCTCGAGAAGGAGTT...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGGAGGCAAAAGGCGATaGTCTGGAGTCTCCGAAGCT +
Preference number: 5 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLGGKRR*SGVSEA
Trigger: AGCTTCGGAGACTCCAGACAATCGCCTTTTGCCTCC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp CAGGACTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCATCACATGCCAATTATTaGGCTATCTTTTCACTAAGC +
Preference number: 5 (lower is better)
Translates to: QDSVFAQRLLGGYCQKTSSHANY*AIFSLS
Trigger: GCTTAGTGAAAAGATAGCCAAATAATTGGCATGTGA...TGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAGTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS CCA 90 bp AGGGAGAAAACTGGTCAGTGGTGTTCATACTATGCTAGAACATCATaGGGACTTAGAGACCCACCCAGTCCAAACTATCTATTTTACCTA +
Preference number: 5 (lower is better)
Translates to: REKTGQWCSYYARTS*GLRDPPSPNYLFYL
Trigger: TAGGTAAAATAGATAGTTTGGACTGGGTGGGTCTCTAAGTCCCCATGATGTTCTAGCATAGTATGAACACCACTGACCAGTTTTCTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS-3UTR CAA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGGCGAGAATTCCCGTTaGCTTAAGTGCTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLGENSR*LKCWGL
Trigger: CAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTAAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 5 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVSVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GCCACCAAAAGCATATATTTGAAAAACAGGATTCGGCGTGCCATATTATGCATTAAACTGCCACACATCTaGAGCTCTCTGGGTACTACG +
Preference number: 5 (lower is better)
Translates to: ATKSIYLKNRIRRAILCIKLPHI*SSLGTT
Trigger: CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTT...AATGCATAATATGGCACGCCGAATCCTGTTTTTCAAATATATGCTTTTGGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
CDS-3UTR CAA 90 bp CTCTGTCTTCGCACAACGGCTTCTTGGAGGCTACTGTCAGAAAACATCACAAACTCACATGCCAATTATTaGGCTATCTTTTCACTAAGC +
Preference number: 5 (lower is better)
Translates to: LCLRTTASWRLLSENITNSHANY*AIFSLS
Trigger: GCTTAGTGAAAAGATAGCCAAATAATTGGCATGTGA...GTTTGTGATGTTTTCTGACAGTAGCCTCCAAGAAGCCGTTGTGCGAAGACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS-3UTR CAA 90 bp CTGGGCCAGAAAGAATTTTTACCACCTGTTTGTAGATGTAACTTATTTGTGGCACAGTGCACACATCTGTaGGTAGGAAGAGGCAACTCT +
Preference number: 5 (lower is better)
Translates to: LGQKEFLPPVCRCNLFVAQCTHL*VGRGNS
Trigger: AGAGTTGCCTCTTCCTACCAACAGATGTGTGCACTG...TGCCACAAATAAGTTACATCTACAAACAGGTGGTAAAAATTCTTTCTGGCCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGAGGCTGCCATTGCATaGTTTCCGTTTGTGCTCGAT +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLEAAIA*FPFVLD
Trigger: ATCGAGCACAAACGGAAACAATGCAATGGCAGCCTC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLKQRLP*HCFRLC
Trigger: GCACAAACGGAAACAATGCAATGGCAGCCTCTGCTT...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp AACATAGAATGTATAGAAACAAGGGGTTGGGGACTCATGCGCATTTCCACAATAGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: NIECIETRGWGLMRISTIAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...TATTGTGGAAATGCGCATGAGTCCCCAACCCCTTGTTTCTATACATTCTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642439.1
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAAGTGTTCTGTGCGTGTaGCAAGAGAAACCATGCACT +
Preference number: 5 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQSVLCV*QEKPCT
Trigger: AGTGCATGGTTTCTCTTGCAACACGCACAGAACACT...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTGACTTTCTCCTAGAGTaGATCTTACCGGAAATGTGG +
Preference number: 5 (lower is better)
Translates to: DLQAFQLLVWRRILCLNADFLLE*ILPEMW
Trigger: CCACATTTCCGGTAAGATCAACTCTAGGAGAAAGTC...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGAGGAGTGCAAATCCTGTaGCTTGAGATTTGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: LLELILPEMWMLSRKSERGVQIL*LEICLS
Trigger: AGAAAGGCAAATCTCAAGCAACAGGATTTGCACTCC...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp AATAAGAAACTACTGACATTTATCACCTTCTTTAGGATTTACCGCTCGCCCAGTAAAAATCACCCGAAGTaGAGAGCTGAGCCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: NKKLLTFITFFRIYRSPSKNHPK*RAEPPS
Trigger: ACTTGGAGGCTCAGCTCTCAACTTCGGGTGATTTTT...ACTGGGCGAGCGGTAAATCCTAAAGAAGGTGATAAATGTCAGTAGTTTCTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS-3UTR CAA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GATTGTCCACTTGACAACCAAGTAGATCTGGATCTATTTCTTTTGGTGCCAGTACTCTGTCAAACCTTATaGTCAGCCTCTTCCTTTCAA +
Preference number: 5 (lower is better)
Translates to: DCPLDNQVDLDLFLLVPVLCQTL*SASSFQ
Trigger: TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAG...TACTGGCACCAAAAGAAATAGATCCAGATCTACTTGGTTGTCAAGTGGACAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCAGAGTCAAGTGCTATTaGAACACCAACTGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLRVKCY*NTNWGR
Trigger: TCTGCCCCAGTTGGTGTTCAAATAGCACTTGACTCT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCAGAGTCAAGTGCTATTaGAACACCAACTGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLRVKCY*NTNWGR
Trigger: TCTGCCCCAGTTGGTGTTCAAATAGCACTTGACTCT...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCTTCCATTCACAGCGCTaGCAATGTTGCGTCCAAGTA +
Preference number: 5 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLFHSQR*QCCVQV
Trigger: TACTTGGACGCAACATTGCAAGCGCTGTGAATGGAA...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TGCATTTTGATTCTCCTTGAAAATTTATGCCATCTGATAAGCGGTAACCTAGTTAAACTGCCACACATCTaGAGCTCTCTGGGTACTACG +
Preference number: 5 (lower is better)
Translates to: CILILLENLCHLISGNLVKLPHI*SSLGTT
Trigger: CGTAGTACCCAGAGAGCTCAAGATGTGTGGCAGTTT...AACTAGGTTACCGCTTATCAGATGGCATAAATTTTCAAGGAGAATCAAAATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000646249.1
ENST00000647472.1
CDS-3UTR CAA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTAGGTGCAATTGTTCATaGGCAATGCTAACAACAGTG +
Preference number: 5 (lower is better)
Translates to: DLQAFQLLVWRRILCLNARCNCS*AMLTTV
Trigger: CACTGTTGTTAGCATTGCCAATGAACAATTGCACCT...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS TCA 90 bp GTTCTGCACAGAATTCATTCACAGAGCATGTCTTGGATATACAGCTaGCTAGATATGTCAGTTATGTTCCAAATGGGTTTTCACAGGTCA +
Preference number: 5 (lower is better)
Translates to: VLHRIHSQSMSWIYS*LDMSVMFQMGFHRS
Trigger: TGACCTGTGAAAACCCATTTGGAACATAACTGACATATCTAGTCAGCTGTATATCCAAGACATGCTCTGTGAATGAATTCTGTGCAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS-3UTR CAA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: VYLELVKENTSGLVLLVFAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLAMCSC*GQIPLD
Trigger: ATCTAGAGGAATTTGCCCCAAACAGGAACACATAGC...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACAAGATTGCTACAGTTCTaGAAGACTTTCCCACAGTAC +
Preference number: 5 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTRLLQF*KTFPQY
Trigger: GTACTGTGGGAAAGTCTTCAAGAACTGTAGCAATCT...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCCTGTGGACAGTGAGATaGCTACAGTTCTTGAAGACT +
Preference number: 5 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLLWTVR*LQFLKT
Trigger: AGTCTTCAAGAACTGTAGCAATCTCACTGTCCACAG...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCCTGTGGACAGTGAGATaGCTACAGTTCTTGAAGACT +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLLWTVR*LQFLKT
Trigger: AGTCTTCAAGAACTGTAGCAATCTCACTGTCCACAG...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCGAAACAGCAACATGTTaGCTCAGCAACGAATTAGGG +
Preference number: 5 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLETATC*LSNELG
Trigger: CCCTAATTCGTTGCTGAGCAAACATGTTGCTGTTTC...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GTAAAATGCAATAGTATTGCCCCATACAGATCATGCATTCAAACGGTGAGAACACTCTGTCAAACCTTATaGTCAGCCTCTTCCTTTCAA +
Preference number: 5 (lower is better)
Translates to: VKCNSIAPYRSCIQTVRTLCQTL*SASSFQ
Trigger: TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAG...TGTTCTCACCGTTTGAATGCATGATCTGTATGGGGCAATACTATTGCATTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTACAGATGTGATTTCCTaGCAGCCTTTTTATGCATCA +
Preference number: 5 (lower is better)
Translates to: DLQAFQLLVWRRILCLNATDVIS*QPFYAS
Trigger: TGATGCATAAAAAGGCTGCAAGGAAATCACATCTGT...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTCGTGTCTGTGCTGACTaGTTAAGCAATCCACTTGTA +
Preference number: 5 (lower is better)
Translates to: VYLELVKENTSGLVLLVFRVCAD*LSNPLV
Trigger: TACAAGTGGATTGCTTAACAAGTCAGCACAGACACG...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp GATTTGCAGGCTTTCCAATTACTAGTCTGGAGAAGAATCCTTTGCTTGAATGCTTGCAAATCCTGTTGCTaGAGATTTGCCTTTCTGATT +
Preference number: 5 (lower is better)
Translates to: DLQAFQLLVWRRILCLNACKSCC*RFAFLI
Trigger: AATCAGAAAGGCAAATCTCAAGCAACAGGATTTGCA...AGCATTCAAGCAAAGGATTCTTCTCCAGACTAGTAATTGGAAAGCCTGCAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS TCA 90 bp TCTATTTTACCTACTTTACAAGACAAGGAAACAAATGCTAACAGGTaGAGGGAGCCCAAAATCTCACAGCATGATACAATAAGGGTCAGA +
Preference number: 5 (lower is better)
Translates to: SILPTLQDKETNANR*REPKISQHDTIRVR
Trigger: TCTGACCCTTATTGTATCATGCTGTGAGATTTTGGGCTCCCTTCACCTGTTAGCATTTGTTTCCTTGTCTTGTAAAGTAGGTAAAATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 90 bp ATCACCATTCCATTATACTGCACTTCAATTTTGCTTCCAGCAATTTaGAAGATGCCTTTAAGCTTTCTGTTGGGGAATCACGAATCCAAG +
Preference number: 5 (lower is better)
Translates to: ITIPLYCTSILLPAI*KMPLSFLLGNHESK
Trigger: CTTGGATTCGTGATTCCCCAACAGAAAGCTTAAAGGCATCTTTCAAATTGCTGGAAGCAAAATTGAAGTGCAGTATAATGGAATGGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CCA 90 bp ATTCTCTCAGTGGAGGTCTATGTTAGCCTGGCCAATTTGAAAGGATaGAGAATACAGGAAAACAGTAACATTTGGTTTTGGAATACATTG +
Preference number: 5 (lower is better)
Translates to: ILSVEVYVSLANLKG*RIQENSNIWFWNTL
Trigger: CAATGTATTCCAAAACCAAATGTTACTGTTTTCCTGTATTCTCCATCCTTTCAAATTGGCCAGGCTAACATAGACCTCCACTGAGAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCAGATTGCTACAGTTCTaGAAGACTTTCCCACAGTAC +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLRLLQF*KTFPQY
Trigger: GTACTGTGGGAAAGTCTTCAAGAACTGTAGCAATCT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TGTACAGTGCACTTAATTGTCCTATCTGAGCAGGTTTATTTTATACTCAACCTCTGCGTTCCAGGGCTTTaGCACATTACACATTCAATT +
Preference number: 5 (lower is better)
Translates to: CTVHLIVLSEQVYFILNLCVPGL*HITHSI
Trigger: AATTGAATGTGTAATGTGCAAAAGCCCTGGAACGCA...GAGGTTGAGTATAAAATAAACCTGCTCAGATAGGACAATTAAGTGCACTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp TTATTTTCTTCTGTTCCCCTCTGTCAAACCTTATTGTCAGCCTCTTCCTTTCAAACCAACGTTATTAGCTaGCAGTACTGCATACAGTAT +
Preference number: 5 (lower is better)
Translates to: LFSSVPLCQTLLSASSFQTNVIS*QYCIQY
Trigger: ATACTGTATGCAGTACTGCAAGCTAATAACGTTGGT...TTGAAAGGAAGAGGCTGACAATAAGGTTTGACAGAGGGGAACAGAAGAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp CTCCTAGAGTTGATCTTACCGGAAATGTGGATGTTATCAAGGAAATCGGAAAGATTTTCTTTATACGTTTaGTGGATCTACCACAACTGC +
Preference number: 5 (lower is better)
Translates to: LLELILPEMWMLSRKSERFSLYV*WIYHNC
Trigger: GCAGTTGTGGTAGATCCACAAAACGTATAAAGAAAA...TCTTTCCGATTTCCTTGATAACATCCACATTTCCGGTAAGATCAACTCTAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCTTAAGTGCCTCTGTTTaGAACAGGGCACATAAGCAA +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLLSASV*NRAHKQ
Trigger: TTGCTTATGTGCCCTGTTCAAAACAGAGGCACTTAA...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642384.2
CDS-3UTR CAA 90 bp CTGTACATGATATGTATTACAGAATGTATGCAGCATGGTCTTTTTCTCTCTCTCACCAACGTTATTAGCTaGCAGTACTGCATACAGTAT +
Preference number: 5 (lower is better)
Translates to: LYMICITECMQHGLFLSLTNVIS*QYCIQY
Trigger: ATACTGTATGCAGTACTGCAAGCTAATAACGTTGGT...GAGAGAGAGAAAAAGACCATGCTGCATACATTCTGTAATACATATCATGTACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335712.11
ENST00000642384.2
CDS-3UTR CAA 90 bp GTATACCTTGAGTTGGTGAAGGAGAATACTTCAGGTTTGGTTCTCTTAGTTTTTAAGGAGCTAATGAGATaGTCCCACCACCAAAATTTA +
Preference number: 5 (lower is better)
Translates to: VYLELVKENTSGLVLLVFKELMR*SHHQNL
Trigger: TAAATTTTGGTGGTGGGACAATCTCATTAGCTCCTT...AAAAACTAAGAGAACCAAACCTGAAGTATTCTCCTTCACCAACTCAAGGTATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS-3UTR CAA 90 bp GTTAATCTAAGACTGAATAACCTATTTGGGACCTCAGTAAGAAGTGTGGTTTTAAATTTGCTTTTGGTTTaGGCTTCTCTAGGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: VNLRLNNLFGTSVRSVVLNLLLV*ASLGSA
Trigger: AGCAGAGCCTAGAGAAGCCAAAACCAAAAGCAAATT...TAAAACCACACTTCTTACTGAGGTCCCAAATAGGTTATTCAGTCTTAGATTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643716.1
CDS CCA 90 bp AAACATTTCATATCTCATTCAATGCCACATATAAATGGTATTTGCTaGACAGTGTGGAAAACAGAAACATCCGTGCTAAAAGCCAATGGT +
Preference number: 5 (lower is better)
Translates to: KHFISHSMPHINGIC*TVWKTETSVLKANG
Trigger: ACCATTGGCTTTTAGCACGGATGTTTCTGTTTTCCACACTGTCCAGCAAATACCATTTATATGTGGCATTGAATGAGATATGAAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS-3UTR CAA 90 bp CAATTATTTGGCTATCTTTTCACTAAGCTAGGTAATCTAGCCAGAAGGTGGATATCACATGCCAATTATTaGGCTATCTTTTCACTAAGC +
Preference number: 5 (lower is better)
Translates to: QLFGYLFTKLGNLARRWISHANY*AIFSLS
Trigger: GCTTAGTGAAAAGATAGCCAAATAATTGGCATGTGA...TATCCACCTTCTGGCTAGATTACCTAGCTTAGTGAAAAGATAGCCAAATAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000646249.1
CDS CCA 90 bp ATGCTTCTGAAAACATTTCATATCTCATTCAATGCCACATATAAATaGTATTTGCTGGACAGTGTGGAAAACAGAAACATCCGTGCTAAA +
Preference number: 5 (lower is better)
Translates to: MLLKTFHISFNATYK*YLLDSVENRNIRAK
Trigger: TTTAGCACGGATGTTTCTGTTTTCCACACTGTCCAGCAAATACCATTTATATGTGGCATTGAATGAGATATGAAATGTTTTCAGAAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CCA 72 bp AGGGCAGCGCCCAAGTCTCCAGGAGCCCGCGCGGCCTaGAAAGAGGGGACCGGGGAGAGGCAGGCGGCGCAG +
Preference number: 6 (lower is better)
Translates to: RAAPKSPGARAA*KEGTGERQAAQ
Trigger: CTGCGCCGCCTGCCTCTCCCCGGTCCCCTCTTTCCAGGCCGCGCGGGCTCCTGGAGACTTGGGCGCTGCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS CCA 72 bp TTAAGTGCTGGGGTTTGCCTTGCTTGCGGCGAGACATaGTGGGCTGCGGGGCGGGCGGCGGCGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: LSAGVCLACGET*WAAGRAAAAAA
Trigger: CGCCGCCGCCGCCGCCGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS CAA 90 bp TCGGGCGAGAATTCCCGTTTGCTTAAGTGCTGGGGTTTGCCTTGCTaGCGGCGAGACATGGTGGGCTGCGGGGCGGGCGGCGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: SGENSRLLKCWGLPC*RRDMVGCGAGGGGG
Trigger: GCCGCCGCCGCCGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS CAA 90 bp GGGAGGTGGGAGGGAGCGCACGGCAACGCGGAATCCAGCCTAAGTTaGGAGGGCTGCGGGTCCGGAAGGGCAGCGCCCAAGTCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: GRWEGAHGNAESSLS*EGCGSGRAAPKSPG
Trigger: TCCTGGAGACTTGGGCGCTGCCCTTCCGGACCCGCAGCCCTCCAAACTTAGGCTGGATTCCGCGTTGCCGTGCGCTCCCTCCCACCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS CCA 72 bp CCTCCAAGTTACAGCTCCGCAGCGGGCGAGGGGAGGTaGGAGGGAGCGCACGGCAACGCGGAATCCAGCCTA +
Preference number: 6 (lower is better)
Translates to: PPSYSSAAGEGR*EGAHGNAESSL
Trigger: TAGGCTGGATTCCGCGTTGCCGTGCGCTCCCTCCCACCTCCCCTCGCCCGCTGCGGAGCTGTAACTTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS CAA 72 bp GAGGGAGCGCACGGCAACGCGGAATCCAGCCTAAGTTaGGAGGGCTGCGGGTCCGGAAGGGCAGCGCCCAAG +
Preference number: 6 (lower is better)
Translates to: EGAHGNAESSLS*EGCGSGRAAPK
Trigger: CTTGGGCGCTGCCCTTCCGGACCCGCAGCCCTCCAAACTTAGGCTGGATTCCGCGTTGCCGTGCGCTCCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS GCA 72 bp ATTCCCGTTTGCTTAAGTGCTGGGGTTTGCCTTGCTTaGGGCGAGACATGGTGGGCTGCGGGGCGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: IPVCLSAGVCLA*GETWWAAGRAA
Trigger: CGCCGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGAAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS GCA 72 bp CACGGCAACGCGGAATCCAGCCTAAGTTTGGAGGGCTaGGGGTCCGGAAGGGCAGCGCCCAAGTCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: HGNAESSLSLEG*GSGRAAPKSPG
Trigger: TCCTGGAGACTTGGGCGCTGCCCTTCCGGACCCGCAGCCCTCCAAACTTAGGCTGGATTCCGCGTTGCCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS CAA 90 bp TCAAGAGGCTCGGGCGAGAATTCCCGTTTGCTTAAGTGCTGGGGTTaGCCTTGCTTGCGGCGAGACATGGTGGGCTGCGGGGCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: SRGSGENSRLLKCWG*PCLRRDMVGCGAGG
Trigger: GCCGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCCCGAGCCTCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS GCA 72 bp GGCTTGCTACCTGGCTGGAATGGTTGCAGTAACCTTTaGATAGGGCTGGGCCGGCCTGGGGACAGCGGTGGG +
Preference number: 6 (lower is better)
Translates to: GLLPGWNGCSNL*IGLGRPGDSGG
Trigger: CCCACCGCTGTCCCCAGGCCGGCCCAGCCCTATGCAAAGGTTACTGCAACCATTCCAGCCAGGTAGCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000477659.1
ENST00000642384.2
CDS GCA 72 bp TCCCTGAGGGTCTCCTTGGCGACAGGGCTGGACCTTTaGACTGGCAGCCTGGACTCTTCTCTGAGCTCCCCC +
Preference number: 6 (lower is better)
Translates to: SLRVSLATGLDL*TGSLDSSLSSP
Trigger: GGGGGAGCTCAGAGAAGAGTCCAGGCTGCCAGTGCAAAGGTCCAGCCCTGTCGCCAAGGAGACCCTCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS CCA 72 bp GGGGGCGTCGCCAGGAAGGGCGGCTTGCTACCTGGCTaGAATGGTTGCAGTAACCTTTGCATAGGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: GGVARKGGLLPG*NGCSNLCIGLG
Trigger: GCCCAGCCCTATGCAAAGGTTACTGCAACCATTCCAGCCAGGTAGCAAGCCGCCCTTCCTGGCGACGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000477659.1
ENST00000642384.2
CDS CAA 72 bp AATTCCCGTTTGCTTAAGTGCTGGGGTTTGCCTTGCTaGCGGCGAGACATGGTGGGCTGCGGGGCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: NSRLLKCWGLPC*RRDMVGCGAGG
Trigger: GCCGCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS GCA 72 bp GAGAATTCCCGTTTGCTTAAGTGCTGGGGTTTGCCTTaGTTGCGGCGAGACATGGTGGGCTGCGGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: ENSRLLKCWGLP*LRRDMVGCGAG
Trigger: GCCCGCCCCGCAGCCCACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGAATTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS GCA 72 bp TCAGCTACAGGGGCCGTGGGAATAGCTGGAGGCCTGTaGATTTCCCTGAGGGTCTCCTTGGCGACAGGGCTG +
Preference number: 6 (lower is better)
Translates to: SATGAVGIAGGL*ISLRVSLATGL
Trigger: CAGCCCTGTCGCCAAGGAGACCCTCAGGGAAATGCACAGGCCTCCAGCTATTCCCACGGCCCCTGTAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS CCA 72 bp GGCAGGAAACAGCCTCAGCTTGGCCCAGGAAGAAGCTaGCGCTCAGCTACAGGGGCCGTGGGAATAGCTGGA +
Preference number: 6 (lower is better)
Translates to: GRKQPQLGPGRS*RSATGAVGIAG
Trigger: TCCAGCTATTCCCACGGCCCCTGTAGCTGAGCGCCAGCTTCTTCCTGGGCCAAGCTGAGGCTGTTTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS CAA 72 bp TTCCCTGAGGGTCTCCTTGGCGACAGGGCTGGACCTTaGCACTGGCAGCCTGGACTCTTCTCTGAGCTCCCC +
Preference number: 6 (lower is better)
Translates to: FPEGLLGDRAGP*HWQPGLFSELP
Trigger: GGGGAGCTCAGAGAAGAGTCCAGGCTGCCAGTGCAAAGGTCCAGCCCTGTCGCCAAGGAGACCCTCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS CAA 90 bp GCCGTGGGAATAGCTGGAGGCCTGTGCATTTCCCTGAGGGTCTCCTaGGCGACAGGGCTGGACCTTTGCACTGGCAGCCTGGACTCTTCT +
Preference number: 6 (lower is better)
Translates to: AVGIAGGLCISLRVS*ATGLDLCTGSLDSS
Trigger: AGAAGAGTCCAGGCTGCCAGTGCAAAGGTCCAGCCCTGTCGCCAAGGAGACCCTCAGGGAAATGCACAGGCCTCCAGCTATTCCCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS GCA 72 bp CCGGCCTGGGGACAGCGGTGGGCTAGACGTGTTCCCTaGCAGCTCTCTAAGTCTCCTAGAGAAATCCATGGC +
Preference number: 6 (lower is better)
Translates to: PAWGQRWARRVP*QLSKSPREIHG
Trigger: GCCATGGATTTCTCTAGGAGACTTAGAGAGCTGGCAGGGAACACGTCTAGCCCACCGCTGTCCCCAGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000477659.1
ENST00000642384.2
ENST00000643459.1
CDS CCA 72 bp GCACTGCCCACAGGTGAGGAGGTCATGATCCCCTTCTaGAGCTCCCAACGGGCCGTGGTCTGGTTCATCATC +
Preference number: 6 (lower is better)
Translates to: ALPTGEEVMIPF*SSQRAVVWFII
Trigger: GATGATGAACCAGACCACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGACCTCCTCACCTGTGGGCAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000489516.7
ENST00000631857.1
ENST00000642180.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643222.1
ENST00000643459.1
ENST00000643716.1
ENST00000644606.1
ENST00000646249.1
ENST00000647038.1
CDS CCA 72 bp CTAGGAGAATGGACACGGCAGGAAACAGCCTCAGCTTaGCCCAGGAAGAAGCTGGCGCTCAGCTACAGGGGC +
Preference number: 6 (lower is better)
Translates to: LGEWTRQETASA*PRKKLALSYRG
Trigger: GCCCCTGTAGCTGAGCGCCAGCTTCTTCCTGGGCCAAGCTGAGGCTGTTTCCTGCCGTGTCCATTCTCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS CAA 90 bp CCTGTGCATTTCCCTGAGGGTCTCCTTGGCGACAGGGCTGGACCTTaGCACTGGCAGCCTGGACTCTTCTCTGAGCTCCCCCTTGGGTTA +
Preference number: 6 (lower is better)
Translates to: PVHFPEGLLGDRAGP*HWQPGLFSELPLGL
Trigger: TAACCCAAGGGGGAGCTCAGAGAAGAGTCCAGGCTGCCAGTGCAAAGGTCCAGCCCTGTCGCCAAGGAGACCCTCAGGGAAATGCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS CAA 90 bp GCAGCCTGTGGAGTGACTGGGAGAGGCCACCACGCAGCTGAAAACTaGCCTCTGGGGAAGCCACATGCGGATCATATGGAGCTGTTGACT +
Preference number: 6 (lower is better)
Translates to: AACGVTGRGHHAAEN*PLGKPHADHMELLT
Trigger: AGTCAACAGCTCCATATGATCCGCATGTGGCTTCCCCAGAGGCAAGTTTTCAGCTGCGTGGTGGCCTCTCCCAGTCACTCCACAGGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS GCA 72 bp CCATGTGCAGAACGAGGGGAGGAGAGGCCCCTCCAGTaGAGAAGTTTATCATGTTGCCCAGGCTGGGTGGAA +
Preference number: 6 (lower is better)
Translates to: PCAERGEERPLQ*RSLSCCPGWVE
Trigger: TTCCACCCAGCCTGGGCAACATGATAAACTTCTGCACTGGAGGGGCCTCTCCTCCCCTCGTTCTGCACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS CAA 72 bp GGAGTGACTGGGAGAGGCCACCACGCAGCTGAAAACTaGCCTCTGGGGAAGCCACATGCGGATCATATGGAG +
Preference number: 6 (lower is better)
Translates to: GVTGRGHHAAEN*PLGKPHADHME
Trigger: CTCCATATGATCCGCATGTGGCTTCCCCAGAGGCAAGTTTTCAGCTGCGTGGTGGCCTCTCCCAGTCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 90 bp GAAACTTTGCCCGAGGAGAGGACAGCAAAGAAAAATCACCCGAAGTaGAGAGCTGAGCCTCCAAGTTACAGCTCCGCAGCGGGCGAGGGG +
Preference number: 6 (lower is better)
Translates to: ETLPEERTAKKNHPK*RAEPPSYSSAAGEG
Trigger: CCCCTCGCCCGCTGCGGAGCTGTAACTTGGAGGCTCAGCTCTCAACTTCGGGTGATTTTTCTTTGCTGTCCTCTCCTCGGGCAAAGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS TCA 72 bp CCTTCCCCACCTGGCCATGCGTTTTCATGTGCCTGGTaGGCTTGCTACTCTGGGCACAGGCATAGTTGCACA +
Preference number: 6 (lower is better)
Translates to: PSPPGHAFSCAW*ACYSGHRHSCT
Trigger: TGTGCAACTATGCCTGTGCCCAGAGTAGCAAGCTCACCAGGCACATGAAAACGCATGGCCAGGTGGGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335712.11
ENST00000477659.1
ENST00000642384.2
CDS GCA 72 bp TCAAGAGGCTCGGGCGAGAATTCCCGTTTGCTTAAGTaGTGGGGTTTGCCTTGCTTGCGGCGAGACATGGTG +
Preference number: 6 (lower is better)
Translates to: SRGSGENSRLLK*WGLPCLRRDMV
Trigger: CACCATGTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCCCGAGCCTCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS GCA 72 bp GAATGGCTTCAAGAGGCTCGGGCGAGAATTCCCGTTTaGTTAAGTGCTGGGGTTTGCCTTGCTTGCGGCGAG +
Preference number: 6 (lower is better)
Translates to: EWLQEARARIPV*LSAGVCLACGE
Trigger: CTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCCCGAGCCTCTTGAAGCCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS CAA 90 bp AGGACGTCCATGCCCCGGGACAGAGTGCGAAGTAAAAGTGAAGCTTaGGAGCTCTTGACCCACATGGATTCTCAGCAGCCACCTCCATCC +
Preference number: 6 (lower is better)
Translates to: RTSMPRDRVRSKSEA*ELLTHMDSQQPPPS
Trigger: GGATGGAGGTGGCTGCTGAGAATCCATGTGGGTCAAGAGCTCCAAAGCTTCACTTTTACTTCGCACTCTGTCCCGGGGCATGGACGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 72 bp CCGAGGAGAGGACAGCAAAGAAAAATCACCCGAAGTTaGGAGCTGAGCCTCCAAGTTACAGCTCCGCAGCGG +
Preference number: 6 (lower is better)
Translates to: PRRGQQRKITRS*ELSLQVTAPQR
Trigger: CCGCTGCGGAGCTGTAACTTGGAGGCTCAGCTCTCAACTTCGGGTGATTTTTCTTTGCTGTCCTCTCCTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646249.1
CDS GCA 72 bp CCACATCCAGGCACTTGGCCTGAAGGGTCACCGGCCTaGCTCTTGGGACATCAAATTTGTGCTTACCTAACG +
Preference number: 6 (lower is better)
Translates to: PHPGTWPEGSPA*LLGHQICAYLT
Trigger: CGTTAGGTAAGCACAAATTTGATGTCCCAAGAGGCAGGCCGGTGACCCTTCAGGCCAAGTGCCTGGATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 72 bp AGAATGGCTTCAAGAGGCTCGGGCGAGAATTCCCGTTaGCTTAAGTGCTGGGGTTTGCCTTGCTTGCGGCGA +
Preference number: 6 (lower is better)
Translates to: RMASRGSGENSR*LKCWGLPCLRR
Trigger: TCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCCCGAGCCTCTTGAAGCCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000631857.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643716.1
ENST00000646249.1
CDS CAA 72 bp CCAGGCACTTGGCCTGAAGGGTCACCGGCCTGCCTCTaGGGACATCAAATTTGTGCTTACCTAACGAAGGCA +
Preference number: 6 (lower is better)
Translates to: PGTWPEGSPACL*GHQICAYLTKA
Trigger: TGCCTTCGTTAGGTAAGCACAAATTTGATGTCCCAAGAGGCAGGCCGGTGACCCTTCAGGCCAAGTGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 72 bp CAGCAAATATTAATAGCGTCAGGGCAGCCTGTGGAGTaGCTGGGAGAGGCCACCACGCAGCTGAAAACTTGC +
Preference number: 6 (lower is better)
Translates to: QQILIASGQPVE*LGEATTQLKTC
Trigger: GCAAGTTTTCAGCTGCGTGGTGGCCTCTCCCAGTCACTCCACAGGCTGCCCTGACGCTATTAATATTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CCA 72 bp GCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATaGGGGTGTGTGAAGAACCTGGCCATGCGTTTTCAT +
Preference number: 6 (lower is better)
Translates to: ATHLELSGYYAE*GCVKNLAMRFH
Trigger: ATGAAAACGCATGGCCAGGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358510.6
CDS CCA 72 bp GCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATaGGGGTGTGTGAAGAACCTGGAAGGAAACACTTGC +
Preference number: 6 (lower is better)
Translates to: ATHLELSGYYAE*GCVKNLEGNTC
Trigger: GCAAGTGTTTCCTTCCAGGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645405.1
CDS CAA 90 bp ATGCCCCGGGACAGAGTGCGAAGTAAAAGTGAAGCTTTGGAGCTCTaGACCCACATGGATTCTCAGCAGCCACCTCCATCCCACCTCAAA +
Preference number: 6 (lower is better)
Translates to: MPRDRVRSKSEALEL*THMDSQQPPPSHLK
Trigger: TTTGAGGTGGGATGGAGGTGGCTGCTGAGAATCCATGTGGGTCAAGAGCTCCAAAGCTTCACTTTTACTTCGCACTCTGTCCCGGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 72 bp TGTGAAGAACCTGGCCATGCGTTTTCATGTGCCTGGTaGGCTTGCTACTCTGGGCACAGGCATAGTTGCACA +
Preference number: 6 (lower is better)
Translates to: CEEPGHAFSCAW*ACYSGHRHSCT
Trigger: TGTGCAACTATGCCTGTGCCCAGAGTAGCAAGCTCACCAGGCACATGAAAACGCATGGCCAGGTTCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358510.6
CDS GCA 72 bp GACTCTGACAGTGTCAGAAAATGCAGTCACCACGGCTaGTTCACAGGAAGTTACACGCAAGGTCCGCACACA +
Preference number: 6 (lower is better)
Translates to: DSDSVRKCSHHG*FTGSYTQGPHT
Trigger: TGTGTGCGGACCTTGCGTGTAACTTCCTGTGAAGCAGCCGTGGTGACTGCATTTTCTGACACTGTCAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642824.1
CDS GCA 72 bp TGGCAGGGTTGTCCAGACTCTGACAGTGTCAGAAAATaGAGTCACCACGGCTGCTTCACAGGAAGTTACACG +
Preference number: 6 (lower is better)
Translates to: WQGCPDSDSVRK*SHHGCFTGSYT
Trigger: CGTGTAACTTCCTGTGAAGCAGCCGTGGTGACTGCATTTTCTGACACTGTCAGAGTCTGGACAACCCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642824.1
CDS CCA 72 bp TCGATATTTATTGTAGCTTTGCCACATCCAGGCACTTaGCCTGAAGGGTCACCGGCCTGCCTCTTGGGACAT +
Preference number: 6 (lower is better)
Translates to: SIFIVALPHPGT*PEGSPACLLGH
Trigger: ATGTCCCAAGAGGCAGGCCGGTGACCCTTCAGGCCAAGTGCCTGGATGTGGCAAAGCTACAATAAATATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 72 bp ATGCCCCGGGACAGAGTGCGAAGTAAAAGTGAAGCTTaGGAGCTCTTGACCCACATGGATTCTCAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: MPRDRVRSKSEA*ELLTHMDSQQP
Trigger: TGGCTGCTGAGAATCCATGTGGGTCAAGAGCTCCAAAGCTTCACTTTTACTTCGCACTCTGTCCCGGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 90 bp TTGCCACATCCAGGCACTTGGCCTGAAGGGTCACCGGCCTGCCTCTaGGGACATCAAATTTGTGCTTACCTAACGAAGGCAGAAACAGAA +
Preference number: 6 (lower is better)
Translates to: LPHPGTWPEGSPACL*GHQICAYLTKAETE
Trigger: TTCTGTTTCTGCCTTCGTTAGGTAAGCACAAATTTGATGTCCCAAGAGGCAGGCCGGTGACCCTTCAGGCCAAGTGCCTGGATGTGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 72 bp CACTATCGACAGCTCATGCTTTTGATGCTTCGTCTGTaGCAGTTGTTGGGTTGCCCTTCTAGGAGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: HYRQLMLLMLRL*QLLGCPSRSWQ
Trigger: CTGCCAGCTCCTAGAAGGGCAACCCAACAACTGTCACAGACGAAGCATCAAAAGCATGAGCTGTCGATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642824.1
CDS TCA 72 bp ACAGAGTGCGAAGTAAAAGTGAAGCTTTGGAGCTCTTaGCCCACATGGATTCTCAGCAGCCACCTCCATCCC +
Preference number: 6 (lower is better)
Translates to: TECEVKVKLWSS*PTWILSSHLHP
Trigger: GGGATGGAGGTGGCTGCTGAGAATCCATGTGGGTCAAGAGCTCCAAAGCTTCACTTTTACTTCGCACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 72 bp TCATCCAACAGCCTCTTAACCAGTCCACTGCCCCTCTaGGGTCTCCCCGGTTATGGCTTTGCTAAATTTCCA +
Preference number: 6 (lower is better)
Translates to: SSNSLLTSPLPL*GLPGYGFAKFP
Trigger: TGGAAATTTAGCAAAGCCATAACCGGGGAGACCTCAGAGGGGCAGTGGACTGGTTAAGAGGCTGTTGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 72 bp GACAGAGTGCGAAGTAAAAGTGAAGCTTTGGAGCTCTaGACCCACATGGATTCTCAGCAGCCACCTCCATCC +
Preference number: 6 (lower is better)
Translates to: DRVRSKSEALEL*THMDSQQPPPS
Trigger: GGATGGAGGTGGCTGCTGAGAATCCATGTGGGTCAAGAGCTCCAAAGCTTCACTTTTACTTCGCACTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS GCA 72 bp TTCATTGTGACACACACAACTCCCTGCGCTAATCTCTaGCCAGCCAACGCATTCTTAAGCGGGGAACTACTT +
Preference number: 6 (lower is better)
Translates to: FIVTHTTPCANL*PANAFLSGELL
Trigger: AAGTAGTTCCCCGCTTAAGAATGCGTTGGCTGGGCAGAGATTAGCGCAGGGAGTTGTGTGTGTCACAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 90 bp TTGCTAAATTTCCATTGCTCTCACCATTCGATATTTATTGTAGCTTaGCCACATCCAGGCACTTGGCCTGAAGGGTCACCGGCCTGCCTC +
Preference number: 6 (lower is better)
Translates to: LLNFHCSHHSIFIVA*PHPGTWPEGSPACL
Trigger: GAGGCAGGCCGGTGACCCTTCAGGCCAAGTGCCTGGATGTGGCAAAGCTACAATAAATATCGAATGGTGAGAGCAATGGAAATTTAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 72 bp CTGCAAATGCAGGTCACTATCGACAGCTCATGCTTTTaGTGCTTCGTCTGTGACAGTTGTTGGGTTGCCCTT +
Preference number: 6 (lower is better)
Translates to: LQMQVTIDSSCF*CFVCDSCWVAL
Trigger: AAGGGCAACCCAACAACTGTCACAGACGAAGCATCAAAAGCATGAGCTGTCGATAGTGACCTGCATTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642824.1
CDS CCA 72 bp CCCCTCCAGTGCAGAAGTTTATCATGTTGCCCAGGCTaGGTGGAAAGTGTTATGTTCTTCCCAAAGTACTCT +
Preference number: 6 (lower is better)
Translates to: PLQCRSLSCCPG*VESVMFFPKYS
Trigger: AGAGTACTTTGGGAAGAACATAACACTTTCCACCCAGCCTGGGCAACATGATAAACTTCTGCACTGGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS CAA 72 bp TCCTGCCCCAACAGTCGCCCTGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGATGACGTTGATAAACAA +
Preference number: 6 (lower is better)
Translates to: SCPNSRPAMCSC*GQIPLDDVDKQ
Trigger: TTGTTTATCAACGTCATCTAGAGGAATTTGCCCCAAACAGGAACACATAGCAGGGCGACTGTTGGGGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS CAA 72 bp CCTCTGGGGAAGCCACATGCGGATCATATGGAGCTGTaGACTGCAGTTTCCATTCAAAACTTCCCTCAAGTT +
Preference number: 6 (lower is better)
Translates to: PLGKPHADHMEL*TAVSIQNFPQV
Trigger: AACTTGAGGGAAGTTTTGAATGGAAACTGCAGTCAACAGCTCCATATGATCCGCATGTGGCTTCCCCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 72 bp TTCCATTGCTCTCACCATTCGATATTTATTGTAGCTTaGCCACATCCAGGCACTTGGCCTGAAGGGTCACCG +
Preference number: 6 (lower is better)
Translates to: FHCSHHSIFIVA*PHPGTWPEGSP
Trigger: CGGTGACCCTTCAGGCCAAGTGCCTGGATGTGGCAAAGCTACAATAAATATCGAATGGTGAGAGCAATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 90 bp TTTCCATTCAAAACTTCCCTCAAGTTTCCAGCATGCCTTCCGGACTaGCCTTACCACAGCCTTGTTCAGCCAGAAATGAAAACCTCCTCG +
Preference number: 6 (lower is better)
Translates to: FPFKTSLKFPACLPD*PYHSLVQPEMKTSS
Trigger: CGAGGAGGTTTTCATTTCTGGCTGAACAAGGCTGTGGTAAGGCAAGTCCGGAAGGCATGCTGGAAACTTGAGGGAAGTTTTGAATGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 72 bp CTCTGGGGAAGCCACATGCGGATCATATGGAGCTGTTaGCTGCAGTTTCCATTCAAAACTTCCCTCAAGTTT +
Preference number: 6 (lower is better)
Translates to: LWGSHMRIIWSC*LQFPFKTSLKF
Trigger: AAACTTGAGGGAAGTTTTGAATGGAAACTGCAGTCAACAGCTCCATATGATCCGCATGTGGCTTCCCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 72 bp AATAAAGGGCTGACCTATAATGCGTCTGATTCATTGTaGCACACACAACTCCCTGCGCTAATCTCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: NKGLTYNASDSL*HTQLPALISAQ
Trigger: CTGGGCAGAGATTAGCGCAGGGAGTTGTGTGTGTCACAATGAATCAGACGCATTATAGGTCAGCCCTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CCA 72 bp GCCACACATCTTGAGCTCTCTGGGTACTACGCCGAATaGGGGTGTGTGAAGAACCTCTATTCAGTTTTTATA +
Preference number: 6 (lower is better)
Translates to: ATHLELSGYYAE*GCVKNLYSVFI
Trigger: TATAAAAACTGAATAGAGGTTCTTCACACACCCCCATTCGGCGTAGTACCCAGAGAGCTCAAGATGTGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479026.2
CDS CCA 72 bp TCCAGTGCAGAAGTTTATCATGTTGCCCAGGCTGGGTaGAAAGTGTTATGTTCTTCCCAAAGTACTCTCCTC +
Preference number: 6 (lower is better)
Translates to: SSAEVYHVAQAG*KVLCSSQSTLL
Trigger: GAGGAGAGTACTTTGGGAAGAACATAACACTTTCCACCCAGCCTGGGCAACATGATAAACTTCTGCACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647472.1
CDS CAA 72 bp GAGCTCCCCCTTGGGTTACCTGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGATGACGTTGATAAACAA +
Preference number: 6 (lower is better)
Translates to: ELPLGLPAMCSC*GQIPLDDVDKQ
Trigger: TTGTTTATCAACGTCATCTAGAGGAATTTGCCCCAAACAGGAACACATAGCAGGTAACCCAAGGGGGAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631857.1
CDS CAA 72 bp AAAACTTCCCTCAAGTTTCCAGCATGCCTTCCGGACTaGCCTTACCACAGCCTTGTTCAGCCAGAAATGAAA +
Preference number: 6 (lower is better)
Translates to: KTSLKFPACLPD*PYHSLVQPEMK
Trigger: TTTCATTTCTGGCTGAACAAGGCTGTGGTAAGGCAAGTCCGGAAGGCATGCTGGAAACTTGAGGGAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 72 bp CTGCTGGGCTCATCTTTACCTGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGATGACGTTGATAAACAA +
Preference number: 6 (lower is better)
Translates to: LLGSSLPAMCSC*GQIPLDDVDKQ
Trigger: TTGTTTATCAACGTCATCTAGAGGAATTTGCCCCAAACAGGAACACATAGCAGGTAAAGATGAGCCCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335712.11
ENST00000358510.6
ENST00000642439.1
ENST00000643222.1
ENST00000646249.1
CDS CAA 72 bp TGGTCATTCCCACATCCTGCTGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGATGACGTTGATAAACAA +
Preference number: 6 (lower is better)
Translates to: WSFPHPAAMCSC*GQIPLDDVDKQ
Trigger: TTGTTTATCAACGTCATCTAGAGGAATTTGCCCCAAACAGGAACACATAGCAGCAGGATGTGGGAATGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489183.1
CDS TCA 72 bp GTGTGTGAAGAACCTGGAAGGAAACACTTGCCCTTATaGCTGAGAAAACTTAGTAAGAAACAGTCCTTTGGT +
Preference number: 6 (lower is better)
Translates to: VCEEPGRKHLPL*LRKLSKKQSFG
Trigger: ACCAAAGGACTGTTTCTTACTAAGTTTTCTCAGTCATAAGGGCAAGTGTTTCCTTCCAGGTTCTTCACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645405.1
CDS CAA 72 bp GGCTTATCCACAGCTTTTTCTAAGCAGAGGCTGCCATaGCATTGTTTCCGTTTGTGCTCGATAAAAATAAGA +
Preference number: 6 (lower is better)
Translates to: GLSTAFSKQRLP*HCFRLCSIKIR
Trigger: TCTTATTTTTATCGAGCACAAACGGAAACAATGCAATGGCAGCCTCTGCTTAGAAAAAGCTGTGGATAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 20 transcripts:
ENST00000335712.11
ENST00000356842.9
ENST00000358510.6
ENST00000359629.10
ENST00000409351.5
ENST00000489183.1
ENST00000489516.7
ENST00000631857.1
ENST00000642180.1
ENST00000642384.2
ENST00000642439.1
ENST00000643004.1
ENST00000643222.1
ENST00000643459.1
ENST00000643716.1
ENST00000644606.1
ENST00000646249.1
ENST00000647038.1
ENST00000647469.1
ENST00000647472.1
CDS CAA 72 bp CTCCAGTGCAGAAGTTTATCTGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGATGACGTTGATAAACAA +
Preference number: 6 (lower is better)
Translates to: LQCRSLSAMCSC*GQIPLDDVDKQ
Trigger: TTGTTTATCAACGTCATCTAGAGGAATTTGCCCCAAACAGGAACACATAGCAGATAAACTTCTGCACTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356842.9
ENST00000359629.10
ENST00000489516.7
ENST00000642384.2
ENST00000643459.1
ENST00000644606.1
CDS CAA 72 bp CTTCTGACAGCTGTTGATTCTGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGATGACGTTGATAAACAA +
Preference number: 6 (lower is better)
Translates to: LLTAVDSAMCSC*GQIPLDDVDKQ
Trigger: TTGTTTATCAACGTCATCTAGAGGAATTTGCCCCAAACAGGAACACATAGCAGAATCAACAGCTGTCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642180.1
CDS CAA 72 bp ATACATCCTCCAGTTCAGTCTGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGATGACGTTGATAAACAA +
Preference number: 6 (lower is better)
Translates to: IHPPVQSAMCSC*GQIPLDDVDKQ
Trigger: TTGTTTATCAACGTCATCTAGAGGAATTTGCCCCAAACAGGAACACATAGCAGACTGAACTGGAGGATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647469.1
CDS CAA 72 bp GTTTTCACAGGTCAAGGTTCTGCTATGTGTTCCTGTTaGGGGCAAATTCCTCTAGATGACGTTGATAAACAA +
Preference number: 6 (lower is better)
Translates to: VFTGQGSAMCSC*GQIPLDDVDKQ
Trigger: TTGTTTATCAACGTCATCTAGAGGAATTTGCCCCAAACAGGAACACATAGCAGAACCTTGACCTGTGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643004.1
CDS CAA 90 bp GGATGGAGAATACAGGAAAACAGTAACATTTGGTTTTGGAATACATaGTGTAATCCATCTGCAACGAACCTCAGGTCTTGCTTCAGCAAA +
Preference number: 6 (lower is better)
Translates to: GWRIQENSNIWFWNT*CNPSATNLRSCFSK
Trigger: TTTGCTGAAGCAAGACCTGAGGTTCGTTGCAGATGGATTACACAATGTATTCCAAAACCAAATGTTACTGTTTTCCTGTATTCTCCATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 72 bp TTCTCTCAGTGGAGGTCTATGTTAGCCTGGCCAATTTaGAAGGATGGAGAATACAGGAAAACAGTAACATTT +
Preference number: 6 (lower is better)
Translates to: FSQWRSMLAWPI*KDGEYRKTVTF
Trigger: AAATGTTACTGTTTTCCTGTATTCTCCATCCTTTCAAATTGGCCAGGCTAACATAGACCTCCACTGAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645224.1
ENST00000645455.1
CDS TCA 72 bp GTGCGAGCGAGGGAAATAAGAAGGGTTCTAAAGCCATaGTACGCCTTTTATCATTTCAGCTTTATCATTTCA +
Preference number: 6 (lower is better)
Translates to: VRAREIRRVLKP*YAFYHFSFIIS
Trigger: TGAAATGATAAAGCTGAAATGATAAAAGGCGTATCATGGCTTTAGAACCCTTCTTATTTCCCTCGCTCGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 72 bp TGTAATTTGATGGTTTATAGGCCTCCTCTCGGATTATaGAACAATACCAAGCCTTCAAGTGCAGTGTGTCTA +
Preference number: 6 (lower is better)
Translates to: CNLMVYRPPLGL*NNTKPSSAVCL
Trigger: TAGACACACTGCACTTGAAGGCTTGGTATTGTTTCATAATCCGAGAGGAGGCCTATAAACCATCAAATTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS TCA 72 bp CCATTATACTGCACTTCAATTTTGCTTCCAGCAATTTaGAAGATGCCTTTAAGCTTTCTGTTGGGGAATCAC +
Preference number: 6 (lower is better)
Translates to: PLYCTSILLPAI*KMPLSFLLGNH
Trigger: GTGATTCCCCAACAGAAAGCTTAAAGGCATCTTTCAAATTGCTGGAAGCAAAATTGAAGTGCAGTATAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 72 bp GTCCTACAAGGAACACATATTTCACAACTGATTCATTaGCCCCTTACTCTGAGCACATGGGATAATAAAAGA +
Preference number: 6 (lower is better)
Translates to: VLQGTHISQLIH*PLTLSTWDNKR
Trigger: TCTTTTATTATCCCATGTGCTCAGAGTAAGGGGCAAATGAATCAGTTGTGAAATATGTGTTCCTTGTAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 90 bp TATCACCATTCCATTATACTGCACTTCAATTTTGCTTCCAGCAATTaGAAAGATGCCTTTAAGCTTTCTGTTGGGGAATCACGAATCCAA +
Preference number: 6 (lower is better)
Translates to: YHHSIILHFNFASSN*KDAFKLSVGESRIQ
Trigger: TTGGATTCGTGATTCCCCAACAGAAAGCTTAAAGGCATCTTTCAAATTGCTGGAAGCAAAATTGAAGTGCAGTATAATGGAATGGTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 72 bp TCCATTATACTGCACTTCAATTTTGCTTCCAGCAATTaGAAAGATGCCTTTAAGCTTTCTGTTGGGGAATCA +
Preference number: 6 (lower is better)
Translates to: SIILHFNFASSN*KDAFKLSVGES
Trigger: TGATTCCCCAACAGAAAGCTTAAAGGCATCTTTCAAATTGCTGGAAGCAAAATTGAAGTGCAGTATAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CAA 72 bp TTTCATATCTCATTCAATGCCACATATAAATGGTATTaGCTGGACAGTGTGGAAAACAGAAACATCCGTGCT +
Preference number: 6 (lower is better)
Translates to: FHISFNATYKWY*LDSVENRNIRA
Trigger: AGCACGGATGTTTCTGTTTTCCACACTGTCCAGCAAATACCATTTATATGTGGCATTGAATGAGATATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645224.1
CDS CCA 72 bp GACAAACAAAGCAGCATATGTTTATCCTTTACCATTTaGGAAGTGTACATTAATTACTGCAGATTGTCTCCT +
Preference number: 6 (lower is better)
Translates to: DKQSSICLSFTI*EVYINYCRLSP
Trigger: AGGAGACAATCTGCAGTAATTAATGTACACTTCCCAAATGGTAAAGGATAAACATATGCTGCTTTGTTTGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645224.1