Pregenerated sensors for BCKDHB (Homo sapiens)
Ensembl gene IDs: ENSG00000083123Ensembl transcript IDs: ENST00000320393.9, ENST00000356489.9, ENST00000369760.8, ENST00000468520.1, ENST00000486968.1, ENST00000491328.1
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGAGGCACGTGGCCACCATCACTACCTTGGCTCTTTATTACGGCTaGTCCACGGAAGGGAACCACATGGACAACAAAAGTGAAGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: TRHVATITTLALYYG*STEGNHMDNKSEGV Trigger: GACTCCTTCACTTTTGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAGTGATGGTGGCCACGTGCCTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR GCA 90 bp | ACCAACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTaGTGTGTCTTGGTTAACAGTACGTTAATGTCAGGGGCACATAGT | + |
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Preference number: 1 (lower is better) Translates to: TNFTIKVCYHQNTDD*CVLVNSTLMSGAHS Trigger: ACTATGTGCCCCTGACATTAACGTACTGTTAACCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGTTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR TCA 90 bp | TTCTCTATCCGCACAAATGTAAAGGCGTTTCACTCTGATTTTCAGTaGGCTAGATTTACTACCCATACACAAAAGTCAAGAATTCTAGCA | + |
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Preference number: 1 (lower is better) Translates to: FSIRTNVKAFHSDFQ*ARFTTHTQKSRILA Trigger: TGCTAGAATTCTTGACTTTTGTGTATGGGTAGTAAATCTAGCTCACTGAAAATCAGAGTGAAACGCCTTTACATTTGTGCGGATAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR-3UTR TCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGGCAGGACAATCGCTTaGACCTGGGAGGCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LPWLFITAGPRKGTTWTTGRTIA*TWEAEV Trigger: AACCTCTGCCTCCCAGGTTCAAGCGATTGTCCTGCC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR CAA 90 bp | ATTACTTTAAAAATAGCAACGAGGCACGTGGCCACCATCACTACCTaGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGAC | + |
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Preference number: 2 (lower is better) Translates to: ITLKIATRHVATITT*ALYYGWSTEGNHMD Trigger: GTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAGTGATGGTGGCCACGTGCCTCGTTGCTATTTTTAAAGTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR-3UTR CCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGAATACATGCATCTGTaGGCTAATGGTCCTAACTTC | + |
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Preference number: 2 (lower is better) Translates to: LPWLFITAGPRKGTTWTTEYMHL*ANGPNF Trigger: GAAGTTAGGACCATTAGCCCACAGATGCATGTATTC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR-3UTR TCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACACACTCTGATTTTCAGTaGGCTAGATTTACTACCCAT | + |
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Preference number: 2 (lower is better) Translates to: LPWLFITAGPRKGTTWTTHSDFQ*ARFTTH Trigger: ATGGGTAGTAAATCTAGCTCACTGAAAATCAGAGTG...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR-3UTR GCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGGTATAAAGTACACTTaGAATCTAAACCATGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: LPWLFITAGPRKGTTWTTGIKYT*NLNHGR Trigger: TCTACCATGGTTTAGATTGCAAGTGTACTTTATACC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR CCA 72 bp | CTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATaGACAACAAAAGTGAAGGAGTCCTCTAACCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: LFITAGPRKGTT*TTKVKESSNQL Trigger: GAGCTGGTTAGAGGACTCCTTCACTTTTGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR TCA 72 bp | CTGGTCCACGGAAGGGAACCACATGGACAACAAAAGTaGAGGAGTCCTCTAACCAGCTCTAAGTGTGATTTA | + |
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Preference number: 3 (lower is better) Translates to: LVHGREPHGQQK*RSPLTSSKCDL Trigger: TAAATCACACTTAGAGCTGGTTAGAGGACTCCTTCACTTTTGTTGTCCATGTGGTTCCCTTCCGTGGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR-3UTR CAA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACATATTGTAGATGCCAGTaGCTTTCACAGACATTAAGA | + |
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Preference number: 3 (lower is better) Translates to: LPWLFITAGPRKGTTWTTYCRCQ*LSQTLR Trigger: TCTTAATGTCTGTGAAAGCAACTGGCATCTACAATA...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR TCA 72 bp | CGCACAAATGTAAAGGCGTTTCACTCTGATTTTCAGTaGGCTAGATTTACTACCCATACACAAAAGTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: RTNVKAFHSDFQ*ARFTTHTQKSR Trigger: TCTTGACTTTTGTGTATGGGTAGTAAATCTAGCTCACTGAAAATCAGAGTGAAACGCCTTTACATTTGTGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR GCA 72 bp | ACCATCAAAGTTTGTTACCATCAAAACACTGATGATTaGTGTGTCTTGGTTAACAGTACGTTAATGTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: TIKVCYHQNTDD*CVLVNSTLMSG Trigger: CCCTGACATTAACGTACTGTTAACCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR GCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGGAAGCCGACGCCAGTaGCCCTCAGCCCCTGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTGSRRQ*PSAPAA Trigger: GGCGGCAGGGGCTGAGGGGCACTGGCGTCGGCTTCC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGCCACCTGCCGCCTCTaGGCCGCATCCTCGACAGTC | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTATCRL*AASSTV Trigger: GACTGTCGAGGATGCGGCCCAGAGGCGGCAGGTGGC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGGCTGGAAAGTAAAATaGGCCACCTGCCGCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTGWKVK*ATCRLW Trigger: CCAGAGGCGGCAGGTGGCTCATTTTACTTTCCAGCC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACACACTCCCTTCCTGTATaGCTTCGGCCTGGGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTHSLPV*LRPGTV Trigger: CACTGTCCCAGGCCGAAGTCATACAGGAAGGGAGTG...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGTCAAGGGAGCCTCGTaGCTGATTAGCAGTCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTVKGAS*LISSRP Trigger: AGGGCGACTGCTAATCAGTCACGAGGCTCCCTTGAC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAAGGGAGCCTCGTGACTaGTTAGCAGTCGCCCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTREPRD*LAVALF Trigger: AAACAGGGCGACTGCTAATCAGTCACGAGGCTCCCT...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| 3UTR CAA 72 bp | AAAATAGCAACGAGGCACGTGGCCACCATCACTACCTaGGCTCTTTATTACGGCTGGTCCACGGAAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: KIATRHVATITT*ALYYGWSTEGN Trigger: GTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAGTGATGGTGGCCACGTGCCTCGTTGCTATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR GCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAAGAGCTGATTTCCGATaGAAAGCCGCCTGTCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTRADFR*KAACQG Trigger: CCCTTGACAGGCGGCTTTGCATCGGAAATCAGCTCT...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGCTCTTTATTACGGCTaGTCCACGGAAGGGAACCAC | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTALYYG*STEGNH Trigger: GTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAAACACAAAAATTAGCTaGGCATGGTGGTGGGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTNTKIS*AWWWAP Trigger: AGGCGCCCACCACCATGCCCAGCTAATTTTTGTGTT...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAAGAAGTCCTTTGGCCTaGAAAGGGCTTCTGGGTATA | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTRSPLA*KGLLGI Trigger: TATACCCAGAAGCCCTTTCCAGGCCAAAGGACTTCT...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACATGTATGACTTCGGCCTaGGACAGTGGGATGTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTCMTSA*DSGMLY Trigger: ATACAACATCCCACTGTCCCAGGCCGAAGTCATACA...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACACCACCATCACTACCTTaGCTCTTTATTACGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTPPSLP*LFITAG Trigger: ACCAGCCGTAATAAAGAGCCAAGGTAGTGATGGTGG...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAAAAAGATTCATTTTCTaGGTTTGCCCGTACTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTKRFIF*VCPYSR Trigger: CCGGGAGTACGGGCAAACTCAGAAAATGAATCTTTT...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGCAGTCGCCCTGTTTTaGTCACAGACTTACAAATTG | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTAVALF*SQTYKL Trigger: CAATTTGTAAGTCTGTGATCAAAACAGGGCGACTGC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGAATTTGAAATCAGCTaGGCCAACATAGTGACACCC | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTEFEIS*ANIVTP Trigger: GGGTGTCACTATGTTGGCTCAGCTGATTTCAAATTC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACACTACACCGGTATGTCTaGGAGAATACATGCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTLHRYV*ENTCIC Trigger: ACAGATGCATGTATTCTCTCAGACATACCGGTGTAG...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGCTTTTCTTTTGCCATaGAAGCTACCTCTCGGATCA | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTAFLLP*KLPLGS Trigger: TGATCCGAGAGGTAGCTTCCATGGCAAAAGAAAAGC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR GCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACATTCACCAAATATTACTaGAGTAGGATCTTTGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTFTKYY*SRIFGQ Trigger: TTGGCCAAAGATCCTACTGCAGTAATATTTGGTGAA...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR GCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACACAAAACACTGATGATTaGTGTGTCTTGGTTAACAGT | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTQNTDD*CVLVNS Trigger: ACTGTTAACCAAGACACAGCAATCATCAGTGTTTTG...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR GCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGTGATTTATTGTAGATaGCAGTTGCTTTCACAGACA | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTVIYCR*QLLSQT Trigger: TGTCTGTGAAAGCAACTGGCATCTACAATAAATCAC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGTCTGGGATGTAGAATaGTTCAAAAATGTGAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTVWDVE*FKNVRK Trigger: TTTCCTCACATTTTTGAACCATTCTACATCCCAGAC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAACACTTCCATTTGTCTaGGATGTAGAATGGTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTTLPFV*DVEWFK Trigger: TTTGAACCATTCTACATCCCAGACAAATGGAAGTGT...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGCCGGGGCTCCGGATCTaGCTGGAAAGTAAAATGAGC | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWPGLRI*LESKMS Trigger: GCTCATTTTACTTTCCAGCCAGATCCGGAGCCCCGG...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAAAAAATGTGAGGAAATaGTGTGTCATAACCACATAC | + |
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Preference number: 4 (lower is better) Translates to: LPWLFITAGPRKGTTWTTKNVRK*CVITTY Trigger: GTATGTGGTTATGACACACCATTTCCTCACATTTTT...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGGGAGGCCAAGGCGGGTaGAACACAAGGTCAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWGGQGG*NTRSRD Trigger: ATCTCTTGACCTTGTGTTCCACCCGCCTTGGCCTCC...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGGGCAGGTGGATCACTTaGGGTCAGGAATTTGAAATC | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWGRWIT*GQEFEI Trigger: GATTTCAAATTCCTGACCTCAAGTGATCCACCTGCC...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGCATGGACAACAAAAGTaGAGGAGTCCTCTAACCAGC | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWHGQQK*RSPLTS Trigger: GCTGGTTAGAGGACTCCTTCACTTTTGTTGTCCATG...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGACAAAAGAAGTCCTTTaGCCTGGAAAGGGCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWTKEVL*PGKGFW Trigger: CCAGAAGCCCTTTCCAGGCCAAAGGACTTCTTTTGT...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGTTCGGCCTGGGACAGTaGGATGTTGTATGGTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWFGLGQ*DVVWFY Trigger: ATAGAACCATACAACATCCCACTGTCCCAGGCCGAA...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGCGGAAGGGAACCACATaGACAACAAAAGTGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWRKGTT*TTKVKE Trigger: CTCCTTCACTTTTGTTGTCCATGTGGTTCCCTTCCG...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGAGGATCTTTGGCCAATaGGTTATCCAAGGCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWRIFGQ*VIQGTC Trigger: ACAAGTGCCTTGGATAACTCATTGGCCAAAGATCCT...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR GCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGGACTTCTTCCGCTGCTaGCCTGTAAAGTATTTTAGG | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWDFFRC*PVKYFR Trigger: CCTAAAATACTTTACAGGGCAGCAGCGGAAGAAGTC...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR GCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGTCCAAGCTTTTCTTTTaGCATGGAAGCTACCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWSKLFF*HGSYLS Trigger: CGAGAGGTAGCTTCCATGGCAAAAGAAAAGCTTGGA...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGTTGAGGTCAGGAATTTaGAATCAGCTGAGCCAACAT | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWLRSGI*NQLSQH Trigger: ATGTTGGCTCAGCTGATTTCAAATTCCTGACCTCAA...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGCAGTGGGATGTTGTATaGTTCTATAGGGACTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWQWDVV*FYRDFF Trigger: GAAGAAGTCCCTATAGAACCATACAACATCCCACTG...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGGAATACATGCATCTGTaGGCTAATGGTCCTAACTTC | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWEYMHL*ANGPNF Trigger: GAAGTTAGGACCATTAGCCCACAGATGCATGTATTC...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR TCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGTTTATCCTCTATGCATaGCAAAAGAAGTCCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWFILYA*QKKSFG Trigger: GCCAAAGGACTTCTTTTGTCATGCATAGAGGATAAA...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR GCA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGGGTATAAAGTACACTTaGAATCTAAACCATGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWGIKYT*NLNHGR Trigger: TCTACCATGGTTTAGATTGCAAGTGTACTTTATACC...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS TCA 90 bp | GTTTGCCCGTACTCCCGGGGCTCCGGATCTGGCTGGAAAGTAAAATaGGCCACCTGCCGCCTCTGGGCCGCATCCTCGACAGTCGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: VCPYSRGSGSGWKVK*ATCRLWAASSTVAA Trigger: CGCCGCGACTGTCGAGGATGCGGCCCAGAGGCGGCAGGTGGCTCATTTTACTTTCCAGCCAGATCCGGAGCCCCGGGAGTACGGGCAAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000320393.9 ENST00000356489.9 ENST00000369760.8 |
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| CDS-3UTR CAA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGCCACCATCACTACCTaGGCTCTTTATTACGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LPWLFITAGPRKGTTWTTATITT*ALYYGW Trigger: CCAGCCGTAATAAAGAGCCAAGGTAGTGATGGTGGC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CAA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGACAAAAGAAGTCCTTaGGCCTGGAAAGGGCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LPWLFITAGPRKGTTWTTDKRSP*AWKGLL Trigger: CAGAAGCCCTTTCCAGGCCAAAGGACTTCTTTTGTC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS CCA 90 bp | CAGGCAACTAGAGTAACATCACTCCCTTCCTGTATGACTTCGGCCTaGGACAGTGGGATGTTGTATGGTTCTATAGGGACTTCTTCCGCT | + |
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Preference number: 5 (lower is better) Translates to: QATRVTSLPSCMTSA*DSGMLYGSIGTSSA Trigger: AGCGGAAGAAGTCCCTATAGAACCATACAACATCCCACTGTCCCAGGCCGAAGTCATACAGGAAGGGAGTGATGTTACTCTAGTTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320393.9 ENST00000356489.9 |
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| CDS-3UTR CAA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACATGGGACAGTGGGATGTaGTATGGTTCTATAGGGACT | + |
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Preference number: 5 (lower is better) Translates to: LPWLFITAGPRKGTTWTTWDSGM*YGSIGT Trigger: AGTCCCTATAGAACCATACAACATCCCACTGTCCCA...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS TCA 90 bp | GTAGAGCTGATTTCCGATGCAAAGCCGCCTGTCAAGGGAGCCTCGTaGCTGATTAGCAGTCGCCCTGTTTTGATCACAGACTTACAAATT | + |
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Preference number: 5 (lower is better) Translates to: VELISDAKPPVKGAS*LISSRPVLITDLQI Trigger: AATTTGTAAGTCTGTGATCAAAACAGGGCGACTGCTAATCAGTCACGAGGCTCCCTTGACAGGCGGCTTTGCATCGGAAATCAGCTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000320393.9 ENST00000356489.9 |
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| CDS CCA 90 bp | ACTCCCTTCCTGTATGACTTCGGCCTGGGACAGTGGGATGTTGTATaGTTCTATAGGGACTTCTTCCGCTGCTGCCCTGTAAAGTATTTT | + |
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Preference number: 5 (lower is better) Translates to: TPFLYDFGLGQWDVV*FYRDFFRCCPVKYF Trigger: AAAATACTTTACAGGGCAGCAGCGGAAGAAGTCCCTATAGAACCATACAACATCCCACTGTCCCAGGCCGAAGTCATACAGGAAGGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320393.9 ENST00000356489.9 |
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| CDS-3UTR CAA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAACTGCAGTAGGATCTTaGGCCAATGAGTTATCCAAG | + |
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Preference number: 5 (lower is better) Translates to: LPWLFITAGPRKGTTWTTTAVGS*ANELSK Trigger: CTTGGATAACTCATTGGCCAAAGATCCTACTGCAGT...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CAA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACACTATCTTTTCCATATTaGTCTCGCAAGCCAACAGTG | + |
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Preference number: 5 (lower is better) Translates to: LPWLFITAGPRKGTTWTTLSFPY*SRKPTV Trigger: CACTGTTGGCTTGCGAGACAAATATGGAAAAGATAG...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CAA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACATCACAGACTTACAAATaGTGTCCACATCCCAAGGTA | + |
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Preference number: 5 (lower is better) Translates to: LPWLFITAGPRKGTTWTTSQTYK*CPHPKV Trigger: TACCTTGGGATGTGGACACAATTTGTAAGTCTGTGA...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CAA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAAGCAGTCGCCCTGTTTaGATCACAGACTTACAAATT | + |
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Preference number: 5 (lower is better) Translates to: LPWLFITAGPRKGTTWTTSSRPV*ITDLQI Trigger: AATTTGTAAGTCTGTGATCAAAACAGGGCGACTGCT...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CAA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAGATGATTGCTGTGTCTaGGTTAACAGTACGTTAATG | + |
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Preference number: 5 (lower is better) Translates to: LPWLFITAGPRKGTTWTTDDCCV*VNSTLM Trigger: CATTAACGTACTGTTAACCAAGACACAGCAATCATC...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS CCA 90 bp | CAAGGATTTTTATCCTCTATGCATGACAAAAGAAGTCCTTTGGCCTaGAAAGGGCTTCTGGGTATAACCACCTTGATTCCTGGGCAATGG | + |
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Preference number: 5 (lower is better) Translates to: QGFLSSMHDKRSPLA*KGLLGITTLIPGQW Trigger: CCATTGCCCAGGAATCAAGGTGGTTATACCCAGAAGCCCTTTCCAGGCCAAAGGACTTCTTTTGTCATGCATAGAGGATAAAAATCCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000320393.9 ENST00000356489.9 |
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| CDS-3UTR CAA 90 bp | CTACCTTGGCTCTTTATTACGGCTGGTCCACGGAAGGGAACCACATGGACAACAAAATCCAACAATTCCTaGTTCACACAATGGGGTATT | + |
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Preference number: 5 (lower is better) Translates to: LPWLFITAGPRKGTTWTTKSNNS*FTQWGI Trigger: AATACCCCATTGTGTGAACAAGGAATTGTTGGATTT...TGTTGTCCATGTGGTTCCCTTCCGTGGACCAGCCGTAATAAAGAGCCAAGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CAA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGATTCATTTTCTGAGTTaGCCCGTACTCCCGGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWIHFLS*PVLPGL Trigger: GAGCCCCGGGAGTACGGGCAAACTCAGAAAATGAAT...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CAA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGCTGGGTATAACCACCTaGATTCCTGGGCAATGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWLGITT*IPGQWA Trigger: TGCCCATTGCCCAGGAATCAAGGTGGTTATACCCAG...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS-3UTR CAA 90 bp | ACTTTACCATCAAAGTTTGTTACCATCAAAACACTGATGATTGCTGTGTCTTGGCTCCAAGCTTTTCTTTaGCCATGGAAGCTACCTCTC | + |
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Preference number: 5 (lower is better) Translates to: TLPSKFVTIKTLMIAVSWLQAFL*PWKLPL Trigger: GAGAGGTAGCTTCCATGGCAAAAGAAAAGCTTGGAG...CCAAGACACAGCAATCATCAGTGTTTTGATGGTAACAAACTTTGATGGTAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS CCA 90 bp | TTTTCGAAGGGCATCATAACACTTCCATTTGTCTGGGATGTAGAATaGTTCAAAAATGTGAGGAAATGGTGTGTCATAACCACATACTCT | + |
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Preference number: 5 (lower is better) Translates to: FSKGIITLPFVWDVE*FKNVRKWCVITTYS Trigger: AGAGTATGTGGTTATGACACACCATTTCCTCACATTTTTGAACCATTCTACATCCCAGACAAATGGAAGTGTTATGATGCCCTTCGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000320393.9 ENST00000356489.9 ENST00000491328.1 |
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| CDS TCA 90 bp | ATAGTAGCTTTCTCAAGATGCATACCTACCTATATGGTCAATAGTTaGTCATTTTTCGAAGGGCATCATAACACTTCCATTTGTCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: IVAFSRCIPTYMVNS*SFFEGHHNTSICLG Trigger: TCCCAGACAAATGGAAGTGTTATGATGCCCTTCGAAAAATGATCAACTATTGACCATATAGGTAGGTATGCATCTTGAGAAAGCTACTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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| CDS TCA 72 bp | TACTCCCGGGGCTCCGGATCTGGCTGGAAAGTAAAATaGGCCACCTGCCGCCTCTGGGCCGCATCCTCGACA | + |
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Preference number: 6 (lower is better) Translates to: YSRGSGSGWKVK*ATCRLWAASST Trigger: TGTCGAGGATGCGGCCCAGAGGCGGCAGGTGGCTCATTTTACTTTCCAGCCAGATCCGGAGCCCCGGGAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000320393.9 ENST00000356489.9 ENST00000369760.8 |
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| CDS CAA 72 bp | CCTTCCTGTATGACTTCGGCCTGGGACAGTGGGATGTaGTATGGTTCTATAGGGACTTCTTCCGCTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PSCMTSAWDSGM*YGSIGTSSAAA Trigger: GGCAGCAGCGGAAGAAGTCCCTATAGAACCATACAACATCCCACTGTCCCAGGCCGAAGTCATACAGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320393.9 ENST00000356489.9 |
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| CDS TCA 72 bp | ATTTCCGATGCAAAGCCGCCTGTCAAGGGAGCCTCGTaGCTGATTAGCAGTCGCCCTGTTTTGATCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: ISDAKPPVKGAS*LISSRPVLITD Trigger: GTCTGTGATCAAAACAGGGCGACTGCTAATCAGTCACGAGGCTCCCTTGACAGGCGGCTTTGCATCGGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000320393.9 ENST00000356489.9 |
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| CDS CCA 72 bp | CTGTATGACTTCGGCCTGGGACAGTGGGATGTTGTATaGTTCTATAGGGACTTCTTCCGCTGCTGCCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: LYDFGLGQWDVV*FYRDFFRCCPV Trigger: TACAGGGCAGCAGCGGAAGAAGTCCCTATAGAACCATACAACATCCCACTGTCCCAGGCCGAAGTCATACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320393.9 ENST00000356489.9 |
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| CDS GCA 72 bp | GAAACATTCCTCCTGAACTGTAGAGCTGATTTCCGATaGAAAGCCGCCTGTCAAGGGAGCCTCGTGACTGAT | + |
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Preference number: 6 (lower is better) Translates to: ETFLLNCRADFR*KAACQGSLVTD Trigger: ATCAGTCACGAGGCTCCCTTGACAGGCGGCTTTGCATCGGAAATCAGCTCTACAGTTCAGGAGGAATGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320393.9 ENST00000356489.9 |
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| CDS CCA 72 bp | ATCACTCCCTTCCTGTATGACTTCGGCCTGGGACAGTaGGATGTTGTATGGTTCTATAGGGACTTCTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: ITPFLYDFGLGQ*DVVWFYRDFFR Trigger: GCGGAAGAAGTCCCTATAGAACCATACAACATCCCACTGTCCCAGGCCGAAGTCATACAGGAAGGGAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320393.9 ENST00000356489.9 |
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| CDS CCA 72 bp | AGAGTAACATCACTCCCTTCCTGTATGACTTCGGCCTaGGACAGTGGGATGTTGTATGGTTCTATAGGGACT | + |
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Preference number: 6 (lower is better) Translates to: RVTSLPSCMTSA*DSGMLYGSIGT Trigger: AGTCCCTATAGAACCATACAACATCCCACTGTCCCAGGCCGAAGTCATACAGGAAGGGAGTGATGTTACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000320393.9 ENST00000356489.9 |
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| CDS CAA 72 bp | GGATTTTTATCCTCTATGCATGACAAAAGAAGTCCTTaGGCCTGGAAAGGGCTTCTGGGTATAACCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: GFLSSMHDKRSP*AWKGLLGITTL Trigger: CAAGGTGGTTATACCCAGAAGCCCTTTCCAGGCCAAAGGACTTCTTTTGTCATGCATAGAGGATAAAAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000320393.9 ENST00000356489.9 |
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| CDS CAA 90 bp | AATATACAAGGATTTTTATCCTCTATGCATGACAAAAGAAGTCCTTaGGCCTGGAAAGGGCTTCTGGGTATAACCACCTTGATTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: NIQGFLSSMHDKRSP*AWKGLLGITTLIPG Trigger: CCCAGGAATCAAGGTGGTTATACCCAGAAGCCCTTTCCAGGCCAAAGGACTTCTTTTGTCATGCATAGAGGATAAAAATCCTTGTATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000320393.9 ENST00000356489.9 |
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| CDS TCA 72 bp | TTCACCAAATATTACTGCAGTAGGATCTTTGGCCAATaGGTTATCCAAGGCACTTGTTACAGACTGGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: FTKYYCSRIFGQ*VIQGTCYRLEK Trigger: CTTTTCCAGTCTGTAACAAGTGCCTTGGATAACTCATTGGCCAAAGATCCTACTGCAGTAATATTTGGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000320393.9 ENST00000356489.9 ENST00000369760.8 ENST00000486968.1 |
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| CDS CAA 72 bp | AGTGACCGCAATTCCGATTCCAAATCCAACAATTCCTaGTTCACACAATGGGGTATTAAAAACTCTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: SDRNSDSKSNNS*FTQWGIKNSIF Trigger: AAAGATAGAGTTTTTAATACCCCATTGTGTGAACAAGGAATTGTTGGATTTGGAATCGGAATTGCGGTCACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000320393.9 ENST00000356489.9 ENST00000369760.8 |
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| CDS CAA 72 bp | GACTTGAAAAATGAGAGAACAAACCAGCTGTTGATGTaGGTTGCTGCAAATACCATACACAAACAGAAATAC | + |
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Preference number: 6 (lower is better) Translates to: DLKNERTNQLLM*VAANTIHKQKY Trigger: GTATTTCTGTTTGTGTATGGTATTTGCAGCAACCAACATCAACAGCTGGTTTGTTCTCTCATTTTTCAAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468520.1 |
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| CDS CAA 90 bp | TTGATCACAGACTTGAAAAATGAGAGAACAAACCAGCTGTTGATGTaGGTTGCTGCAAATACCATACACAAACAGAAATACCTTACAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LITDLKNERTNQLLM*VAANTIHKQKYLTN Trigger: ATTTGTAAGGTATTTCTGTTTGTGTATGGTATTTGCAGCAACCAACATCAACAGCTGGTTTGTTCTCTCATTTTTCAAGTCTGTGATCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468520.1 |
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| CDS TCA 72 bp | TTCTCAAGATGCATACCTACCTATATGGTCAATAGTTaGTCATTTTTCGAAGGGCATCATAACACTTCCATT | + |
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Preference number: 6 (lower is better) Translates to: FSRCIPTYMVNS*SFFEGHHNTSI Trigger: AATGGAAGTGTTATGATGCCCTTCGAAAAATGATCAACTATTGACCATATAGGTAGGTATGCATCTTGAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000320393.9 |
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