Pregenerated sensors for BCCIP (Homo sapiens)
Ensembl gene IDs: ENSG00000107949Ensembl transcript IDs: ENST00000278100.11, ENST00000299130.7, ENST00000368759.5, ENST00000463330.5, ENST00000478798.1
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATGGCTCTTTCTCTGGCCTGAGGTGGTTCCTTACACACATGCGCTaGTCAGTAGGGCTGTGCTGCCTAGTTGAGGGAGCTCCCTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: HGSFSGLRWFLTHMR*SVGLCCLVEGAPSG Trigger: GCCAGAGGGAGCTCCCTCAACTAGGCAGCACAGCCCTACTGATCAGCGCATGTGTGTAAGGAACCACCTCAGGCCAGAGAAAGAGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR CCA 90 bp | CCTAGGTCCTGTGTCAGCACCACTGTTCCTTCTAATCTTCTCACATaGCTCTTTCTCTGGCCTGAGGTGGTTCCTTACACACATGCGCTG | + |
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Preference number: 1 (lower is better) Translates to: PRSCVSTTVPSNLLT*LFLWPEVVPYTHAL Trigger: CAGCGCATGTGTGTAAGGAACCACCTCAGGCCAGAGAAAGAGCCATGTGAGAAGATTAGAAGGAACAGTGGTGCTGACACAGGACCTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR GCA 90 bp | ACTTTTGAGCTTTGTCCTAGGATGCAGTGTGATCCTTTCAGGTCCTaGTGTATAGCTGTGTCAGGTGGCAGTGCCCATCTAGGGTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: TFELCPRMQCDPFRS*CIAVSGGSAHLGFL Trigger: GAGAAACCCTAGATGGGCACTGCCACCTGACACAGCTATACAGCAGGACCTGAAAGGATCACACTGCATCCTAGGACAAAGCTCAAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR GCA 90 bp | CCCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTTGGTGGCTTaGAAACCGTTGTTTCACATATTTTGTCCATTGTTTGCTTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: PSQESLSFTPWYLVA*KPLFHIFCPLFACF Trigger: GAAACAAGCAAACAATGGACAAAATATGTGAAACAACGGTTTGCAAGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR CCA 90 bp | GTTTGCCCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTTGGTaGCTTGCAAACCGTTGTTTCACATATTTTGTCCATTGTTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: VCPLKNHYPSLPGIW*LANRCFTYFVHCLL Trigger: AAGCAAACAATGGACAAAATATGTGAAACAACGGTTTGCAAGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGGCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR CAA 90 bp | GTGACCGCGAGTTCCGGCCACCTTAGTCTCCCTGGATCCCTGGCATaGTTTTCCTACTGCAGGGAGGCTGGCAGGCTCCACCTGGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: VTASSGHLSLPGSLA*FSYCREAGRLHLGS Trigger: GGAACCCAGGTGGAGCCTGCCAGCCTCCCTGCAGTAGGAAAACAATGCCAGGGATCCAGGGAGACTAAGGTGGCCGGAACTCGCGGTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR-3UTR CCA 90 bp | GTGGGAACAGGCCCTACCCTAGGTCCTGTGTCAGCACCACTGTTCCTTCTAATCCATGCACACTGCAGCTaGGACCCTCCTCGGAGCATG | + |
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Preference number: 2 (lower is better) Translates to: VGTGPTLGPVSAPLFLLIHAHCS*DPPRSM Trigger: CATGCTCCGAGGAGGGTCCCAGCTGCAGTGTGCATG...GATTAGAAGGAACAGTGGTGCTGACACAGGACCTAGGGTAGGGCCTGTTCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCATGCCTCTCTACTGGATGCTAGACATTGTACATTTTACCTTCTTGGGCACGCTGTGCTGCCTAGTTaGGGGAGCTCCCTCTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: FHASLLDARHCTFYLLGHAVLPS*GSSLWP Trigger: GGGCCAGAGGGAGCTCCCTCAACTAGGCAGCACAGC...GTGCCCAAGAAGGTAAAATGTACAATGTCTAGCATCCAGTAGAGAGGCATGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR-3UTR GCA 90 bp | CAGTGCCCCATAAATCATGAGGTTTTCCAGCTAGGGTGGTGGGAACAGGCCCTATGTTTGCTTGTTTCATaGAGGAGGGAAAAGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: QCPINHEVFQLGWWEQALCLLVS*RREKSS Trigger: ACTGGACTTTTCCCTCCTGCATGAAACAAGCAAACA...TAGGGCCTGTTCCCACCACCCTAGCTGGAAAACCTCATGATTTATGGGGCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTTTGCCCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTTGGTGGCTGTCAGAGTTTCCTCTTaGTCCACAACTCTCGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: LSLPSQESLSFTPWYLVAVRVSS*STTLEV Trigger: GACTTCGAGAGTTGTGGATCAAGAGGAAACTCTGAC...AGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGGCAAACTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCCCCATAAATCATGAGGTTTTCCAGCTAGGGTGGTGGGAACAGGCCCTAATTATCTGGCAGCACTaGATAATGATGGAAATCTTT | + |
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Preference number: 2 (lower is better) Translates to: QCPINHEVFQLGWWEQALIIWQH*IMMEIF Trigger: AAAGATTTCCATCATTATCCAGTGCTGCCAGATAAT...TAGGGCCTGTTCCCACCACCCTAGCTGGAAAACCTCATGATTTATGGGGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR CAA 90 bp | CACTCCCTGGTATTTGGTGGCTTGCAAACCGTTGTTTCACATATTTaGTCCATTGTTTGCTTGTTTCATGCAGGAGGGAAAAGTCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: HSLVFGGLQTVVSHI*SIVCLFHAGGKSPV Trigger: TACTGGACTTTTCCCTCCTGCATGAAACAAGCAAACAATGGACAAAATATGTGAAACAACGGTTTGCAAGCCACCAAATACCAGGGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR-3UTR CCA 90 bp | TTTCATGCCTCTCTACTGGATGCTAGACATTGTACATTTTACCTTCTTGGGCACCTATCCTTCACTCCCTaGTATTTGGTGGCTTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: FHASLLDARHCTFYLLGHLSFTP*YLVACK Trigger: TTTGCAAGCCACCAAATACCAGGGAGTGAAGGATAG...GTGCCCAAGAAGGTAAAATGTACAATGTCTAGCATCCAGTAGAGAGGCATGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR CAA 90 bp | GCCCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTTGGTGGCTaGCAAACCGTTGTTTCACATATTTTGTCCATTGTTTGCTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: ALSRITILHSLVFGG*QTVVSHILSIVCLF Trigger: AAACAAGCAAACAATGGACAAAATATGTGAAACAACGGTTTGCAAGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR CAA 90 bp | CTGAGTTTGCCCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTaGGTGGCTTGCAAACCGTTGTTTCACATATTTTGTCCATTGTTT | + |
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Preference number: 2 (lower is better) Translates to: LSLPSQESLSFTPWY*VACKPLFHIFCPLF Trigger: AAACAATGGACAAAATATGTGAAACAACGGTTTGCAAGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGGCAAACTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR GCA 72 bp | CTTAGTCTCCCTGGATCCCTGGCATTGTTTTCCTACTaGAGGGAGGCTGGCAGGCTCCACCTGGGTTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: LSLPGSLALFSY*REAGRLHLGSP Trigger: GGGGGAACCCAGGTGGAGCCTGCCAGCCTCCCTGCAGTAGGAAAACAATGCCAGGGATCCAGGGAGACTAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR-3UTR CAA 90 bp | CTCTCCAGTACTGTGACCGCGAGTTCCGGCCACCTTAGTCTCCCTGGATCCCTGGCTCCCCTCCTGAGTTaGCCCTCTCAAGAATCACTA | + |
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Preference number: 3 (lower is better) Translates to: LSSTVTASSGHLSLPGSLAPLLS*PSQESL Trigger: TAGTGATTCTTGAGAGGGCAAACTCAGGAGGGGAGC...CAGGGATCCAGGGAGACTAAGGTGGCCGGAACTCGCGGTCACAGTACTGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR TCA 72 bp | CCCCGACTTAGATCTGTGTGTCTCTCTCCAGTACTGTaGCCGCGAGTTCCGGCCACCTTAGTCTCCCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: PRLRSVCLSPVL*PRVPATLVSLD Trigger: ATCCAGGGAGACTAAGGTGGCCGGAACTCGCGGTCACAGTACTGGAGAGAGACACACAGATCTAAGTCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR TCA 72 bp | TTCTCTGGCCTGAGGTGGTTCCTTACACACATGCGCTaGTCAGTAGGGCTGTGCTGCCTAGTTGAGGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: FSGLRWFLTHMR*SVGLCCLVEGA Trigger: AGCTCCCTCAACTAGGCAGCACAGCCCTACTGATCAGCGCATGTGTGTAAGGAACCACCTCAGGCCAGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR-3UTR CAA 90 bp | CTCTCCAGTACTGTGACCGCGAGTTCCGGCCACCTTAGTCTCCCTGGATCCCTGGTGGCTTGCAAACCGTaGTTTCACATATTTTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: LSSTVTASSGHLSLPGSLVACKP*FHIFCP Trigger: TGGACAAAATATGTGAAACAACGGTTTGCAAGCCAC...CAGGGATCCAGGGAGACTAAGGTGGCCGGAACTCGCGGTCACAGTACTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR GCA 72 bp | CTTTGTCCTAGGATGCAGTGTGATCCTTTCAGGTCCTaGTGTATAGCTGTGTCAGGTGGCAGTGCCCATCTA | + |
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Preference number: 3 (lower is better) Translates to: LCPRMQCDPFRS*CIAVSGGSAHL Trigger: TAGATGGGCACTGCCACCTGACACAGCTATACAGCAGGACCTGAAAGGATCACACTGCATCCTAGGACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR GCA 72 bp | TTTCAGGTCCTGCTGTATAGCTGTGTCAGGTGGCAGTaGCCATCTAGGGTTTCTCACTTGTGTTTTCTACCC | + |
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Preference number: 3 (lower is better) Translates to: FQVLLYSCVRWQ*PSRVSHLCFLP Trigger: GGGTAGAAAACACAAGTGAGAAACCCTAGATGGGCACTGCCACCTGACACAGCTATACAGCAGGACCTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR-3UTR CAA 90 bp | TCCTGTGTCAGCACCACTGTTCCTTCTAATCTTCTCACATGGCTCTTTCTCTGGCTAGCACCAGAAAGTTaGATGCAGGCATTGGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: SCVSTTVPSNLLTWLFLWLAPES*MQALED Trigger: GTCTTCCAATGCCTGCATCAAACTTTCTGGTGCTAG...CCAGAGAAAGAGCCATGTGAGAAGATTAGAAGGAACAGTGGTGCTGACACAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR-3UTR CAA 90 bp | TCCTGTGTCAGCACCACTGTTCCTTCTAATCTTCTCACATGGCTCTTTCTCTGGAGTTTGATGCAGGCATaGGAAGACTTAGATTATCTG | + |
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Preference number: 3 (lower is better) Translates to: SCVSTTVPSNLLTWLFLWSLMQA*EDLDYL Trigger: CAGATAATCTAAGTCTTCCAATGCCTGCATCAAACT...CCAGAGAAAGAGCCATGTGAGAAGATTAGAAGGAACAGTGGTGCTGACACAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR-3UTR CAA 90 bp | CTGAGTTTGCCCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTTGGTGGCTTATTTTGTCCATTGTTaGCTTGTTTCATGCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LSLPSQESLSFTPWYLVAYFVHC*LVSCRR Trigger: CCTCCTGCATGAAACAAGCAAACAATGGACAAAATA...AGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGGCAAACTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR CCA 72 bp | AGTTTGCCCTCTCAAGAATCACTATCCTTCACTCCCTaGTATTTGGTGGCTTGCAAACCGTTGTTTCACATA | + |
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Preference number: 3 (lower is better) Translates to: SLPSQESLSFTP*YLVACKPLFHI Trigger: TATGTGAAACAACGGTTTGCAAGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGGCAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR CCA 72 bp | CCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTTaGTGGCTTGCAAACCGTTGTTTCACATATTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: PLKNHYPSLPGI*WLANRCFTYFV Trigger: GACAAAATATGTGAAACAACGGTTTGCAAGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR CCA 72 bp | CTCAAGAATCACTATCCTTCACTCCCTGGTATTTGGTaGCTTGCAAACCGTTGTTTCACATATTTTGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: LKNHYPSLPGIW*LANRCFTYFVH Trigger: ATGGACAAAATATGTGAAACAACGGTTTGCAAGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR GCA 72 bp | TGTTTCACATATTTTGTCCATTGTTTGCTTGTTTCATaGAGGAGGGAAAAGTCCAGTACCTGTTTCTCCATC | + |
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Preference number: 3 (lower is better) Translates to: CFTYFVHCLLVS*RREKSSTCFSI Trigger: GATGGAGAAACAGGTACTGGACTTTTCCCTCCTGCATGAAACAAGCAAACAATGGACAAAATATGTGAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR GCA 72 bp | GAATCACTATCCTTCACTCCCTGGTATTTGGTGGCTTaGAAACCGTTGTTTCACATATTTTGTCCATTGTTT | + |
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Preference number: 3 (lower is better) Translates to: ESLSFTPWYLVA*KPLFHIFCPLF Trigger: AAACAATGGACAAAATATGTGAAACAACGGTTTGCAAGCCACCAAATACCAGGGAGTGAAGGATAGTGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR GCA 90 bp | CTCTCCAGTACTGTGACCGCGAGTTCCGGCCACCTTAGTCTCCCTGGATCCCTGGGGGGATCCGGCGGCTaGGGAACCCCACTTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: LSSTVTASSGHLSLPGSLGGSGG*GTPLST Trigger: CGTGGAAAGTGGGGTTCCGCAGCCGCCGGATCCCCC...CAGGGATCCAGGGAGACTAAGGTGGCCGGAACTCGCGGTCACAGTACTGGAGAG 64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | CTCTCCAGTACTGTGACCGCGAGTTCCGGCCACCTTAGTCTCCCTGGATCCCTGTCTTCCTCGTCGCGCTaGACTGGGGGATCCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LSSTVTASSGHLSLPGSLSSSSR*TGGSGG Trigger: GCCGCCGGATCCCCCAGTCCAGCGCGACGAGGAAGA...CAGGGATCCAGGGAGACTAAGGTGGCCGGAACTCGCGGTCACAGTACTGGAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR GCA 90 bp | CTGAGTTTGCCCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTTGGTGGCTCCCCCGCATGCACACTaGAGCTGGGACCCTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LSLPSQESLSFTPWYLVAPPHAH*SWDPPR Trigger: CCGAGGAGGGTCCCAGCTGCAGTGTGCATGCGGGGG...AGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGGCAAACTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | ACCGCGAGTTCCGGCCACCTTAGTCTCCCTGGATCCCTGGCATTGTTTTCCTACTCCCACATGGCTTATTaGTTCTGTGTGCCCCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: TASSGHLSLPGSLALFSYSHMAY*FCVPPP Trigger: TGGCGGGGGCACACAGAACCAATAAGCCATGTGGGA...GTAGGAAAACAATGCCAGGGATCCAGGGAGACTAAGGTGGCCGGAACTCGCGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | GTCAGGTGGCAGTGCCCATCTAGGGTTTCTCACTTGTGTTTTCTACCCAGTGCCCATGCACACTGCAGCTaGGACCCTCCTCGGAGCATG | + |
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Preference number: 4 (lower is better) Translates to: VRWQCPSRVSHLCFLPSAHAHCS*DPPRSM Trigger: CATGCTCCGAGGAGGGTCCCAGCTGCAGTGTGCATG...GGCACTGGGTAGAAAACACAAGTGAGAAACCCTAGATGGGCACTGCCACCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR TCA 90 bp | CTGAGTTTGCCCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTTGGTGGCTGCTGTGCTGCCTAGTTaGGGGAGCTCCCTCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSLPSQESLSFTPWYLVAAVLPS*GSSLWP Trigger: GGGCCAGAGGGAGCTCCCTCAACTAGGCAGCACAGC...AGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGGCAAACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGCTCGTCGCGCTGGACTaGGGGATCCGGCGGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLLVALD*GIRRLR Trigger: CCGCAGCCGCCGGATCCCCCAGTCCAGCGCGACGAG...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR CCA 90 bp | TTTCATGCCTCTCTACTGGATGCTAGACATTGTACATTTTACCTTCTTGGGCACCTCGTCGCGCTGGACTaGGGGATCCGGCGGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: FHASLLDARHCTFYLLGHLVALD*GIRRLR Trigger: CCGCAGCCGCCGGATCCCCCAGTCCAGCGCGACGAG...GTGCCCAAGAAGGTAAAATGTACAATGTCTAGCATCCAGTAGAGAGGCATGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | GTGGGAACAGGCCCTACCCTAGGTCCTGTGTCAGCACCACTGTTCCTTCTAATCGAAGCTGCTGGTACATaGGCAGAGCGATCTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VGTGPTLGPVSAPLFLLIEAAGT*AERSVE Trigger: CTCCACAGATCGCTCTGCCCATGTACCAGCAGCTTC...GATTAGAAGGAACAGTGGTGCTGACACAGGACCTAGGGTAGGGCCTGTTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | TCCTGTGTCAGCACCACTGTTCCTTCTAATCTTCTCACATGGCTCTTTCTCTGGCTACTGCAGGGAGGCTaGCAGGCTCCACCTGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SCVSTTVPSNLLTWLFLWLLQGG*QAPPGF Trigger: GAACCCAGGTGGAGCCTGCCAGCCTCCCTGCAGTAG...CCAGAGAAAGAGCCATGTGAGAAGATTAGAAGGAACAGTGGTGCTGACACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR TCA 90 bp | CTCTCCAGTACTGTGACCGCGAGTTCCGGCCACCTTAGTCTCCCTGGATCCCTGCGTAGAACCAACTCTTaGATTTGTTCAACACACTGG | + |
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Preference number: 4 (lower is better) Translates to: LSSTVTASSGHLSLPGSLRRTNS*ICSTHW Trigger: CCAGTGTGTTGAACAAATTCAAGAGTTGGTTCTACG...CAGGGATCCAGGGAGACTAAGGTGGCCGGAACTCGCGGTCACAGTACTGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR GCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGGGGGGATCCGGCGGCTaGGGAACCCCACTTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLGGSGG*GTPLST Trigger: CGTGGAAAGTGGGGTTCCGCAGCCGCCGGATCCCCC...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGTCTTCCTCGTCGCGCTaGACTGGGGGATCCGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLSSSSR*TGGSGG Trigger: GCCGCCGGATCCCCCAGTCCAGCGCGACGAGGAAGA...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR CCA 90 bp | ACCGCGAGTTCCGGCCACCTTAGTCTCCCTGGATCCCTGGCATTGTTTTCCTACCTATCCTTCACTCCCTaGTATTTGGTGGCTTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: TASSGHLSLPGSLALFSYLSFTP*YLVACK Trigger: TTTGCAAGCCACCAAATACCAGGGAGTGAAGGATAG...GTAGGAAAACAATGCCAGGGATCCAGGGAGACTAAGGTGGCCGGAACTCGCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | GTCAGGTGGCAGTGCCCATCTAGGGTTTCTCACTTGTGTTTTCTACCCAGTGCCGTCTCCCTGGATCCCTaGCATTGTTTTCCTACTGCA | + |
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Preference number: 4 (lower is better) Translates to: VRWQCPSRVSHLCFLPSAVSLDP*HCFPTA Trigger: TGCAGTAGGAAAACAATGCCAGGGATCCAGGGAGAC...GGCACTGGGTAGAAAACACAAGTGAGAAACCCTAGATGGGCACTGCCACCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR TCA 90 bp | GAGCTGGACAATCACAGGGCTCCCCTCCTGAGTTTGCCCTCTCAAGAATCACTAGTCAGAGTTTCCTCTTaGTCCACAACTCTCGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: ELDNHRAPLLSLPSQESLVRVSS*STTLEV Trigger: GACTTCGAGAGTTGTGGATCAAGAGGAAACTCTGAC...TAGTGATTCTTGAGAGGGCAAACTCAGGAGGGGAGCCCTGTGATTGTCCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR GCA 90 bp | TCCTGTGTCAGCACCACTGTTCCTTCTAATCTTCTCACATGGCTCTTTCTCTGGGCATTGTTTTCCTACTaGAGGGAGGCTGGCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SCVSTTVPSNLLTWLFLWALFSY*REAGRL Trigger: GAGCCTGCCAGCCTCCCTGCAGTAGGAAAACAATGC...CCAGAGAAAGAGCCATGTGAGAAGATTAGAAGGAACAGTGGTGCTGACACAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | GTGGGAACAGGCCCTACCCTAGGTCCTGTGTCAGCACCACTGTTCCTTCTAATCGTGCTGTATCGGAACTaGTTCCAATCCTCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VGTGPTLGPVSAPLFLLIVLYRN*FQSSSC Trigger: ACAAGAAGAGGATTGGAACCAGTTCCGATACAGCAC...GATTAGAAGGAACAGTGGTGCTGACACAGGACCTAGGGTAGGGCCTGTTCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | AGGTGGCAGTGCCCATCTAGGGTTTCTCACTTGTGTTTTCTACCCAGTGCCCCAGAAGGCCCACAGGCTTaGTGGTGTCATTTAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RWQCPSRVSHLCFLPSAPEGPQA*WCHLKT Trigger: AGTTTTTAAATGACACCACCAAGCCTGTGGGCCTTC...TGGGGCACTGGGTAGAAAACACAAGTGAGAAACCCTAGATGGGCACTGCCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | TCCTGTGTCAGCACCACTGTTCCTTCTAATCTTCTCACATGGCTCTTTCTCTGGTCCTCTTCTTGTGTCTaGACCTCCAAGCACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SCVSTTVPSNLLTWLFLWSSSCV*TSKHLR Trigger: CCTGAGGTGCTTGGAGGTCCAGACACAAGAAGAGGA...CCAGAGAAAGAGCCATGTGAGAAGATTAGAAGGAACAGTGGTGCTGACACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR TCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGCCCGCCAGTTCTTTCTaGAGCTGCTGGTACATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLPASSF*SCWYMG Trigger: GCCCATGTACCAGCAGCTTCAGAAAGAACTGGCGGG...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR GCA 90 bp | AGGTGGCAGTGCCCATCTAGGGTTTCTCACTTGTGTTTTCTACCCAGTGCCCCATGTTTGCTTGTTTCATaGAGGAGGGAAAAGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RWQCPSRVSHLCFLPSAPCLLVS*RREKSS Trigger: ACTGGACTTTTCCCTCCTGCATGAAACAAGCAAACA...TGGGGCACTGGGTAGAAAACACAAGTGAGAAACCCTAGATGGGCACTGCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR TCA 90 bp | TTTCATGCCTCTCTACTGGATGCTAGACATTGTACATTTTACCTTCTTGGGCACACAGGGCTCCCCTCCTaGGTTTGCCCTCTCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FHASLLDARHCTFYLLGHTGLPS*VCPLKN Trigger: ATTCTTGAGAGGGCAAACTCAGGAGGGGAGCCCTGT...GTGCCCAAGAAGGTAAAATGTACAATGTCTAGCATCCAGTAGAGAGGCATGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | CTGAGTTTGCCCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTTGGTGGCTGGGCAGAGCGATCTGTaGAGGGACATTAATGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSQESLSFTPWYLVAGQSDL*RDINES Trigger: AGATTCATTAATGTCCCTCCACAGATCGCTCTGCCC...AGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGGCAAACTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGGAAGCTGCTGGTACATaGGCAGAGCGATCTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLEAAGT*AERSVE Trigger: CTCCACAGATCGCTCTGCCCATGTACCAGCAGCTTC...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGTCCCACATGGCTTATTaGTTCTGTGTGCCCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLSHMAY*FCVPPP Trigger: TGGCGGGGGCACACAGAACCAATAAGCCATGTGGGA...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR CCA 90 bp | TCCTGTGTCAGCACCACTGTTCCTTCTAATCTTCTCACATGGCTCTTTCTCTGGGTAGCACTTCCCACATaGCTTATTGGTTCTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCVSTTVPSNLLTWLFLWVALPT*LIGSVC Trigger: GCACACAGAACCAATAAGCCATGTGGGAAGTGCTAC...CCAGAGAAAGAGCCATGTGAGAAGATTAGAAGGAACAGTGGTGCTGACACAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | ACCGCGAGTTCCGGCCACCTTAGTCTCCCTGGATCCCTGGCATTGTTTTCCTACATTATCTGGCAGCACTaGATAATGATGGAAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TASSGHLSLPGSLALFSYIIWQH*IMMEIF Trigger: AAAGATTTCCATCATTATCCAGTGCTGCCAGATAAT...GTAGGAAAACAATGCCAGGGATCCAGGGAGACTAAGGTGGCCGGAACTCGCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR TCA 90 bp | CAGTGCCCCATAAATCATGAGGTTTTCCAGCTAGGGTGGTGGGAACAGGCCCTAATCATTGCTGTCTTCTaGAACATCCGTTTGCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QCPINHEVFQLGWWEQALIIAVF*NIRLLN Trigger: ATTAAGCAAACGGATGTTTCAGAAGACAGCAATGAT...TAGGGCCTGTTCCCACCACCCTAGCTGGAAAACCTCATGATTTATGGGGCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | TCCTGTGTCAGCACCACTGTTCCTTCTAATCTTCTCACATGGCTCTTTCTCTGGGGCCCACAGGCTTGGTaGTGTCATTTAAAAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCVSTTVPSNLLTWLFLWGPQAW*CHLKTC Trigger: ACAAGTTTTTAAATGACACCACCAAGCCTGTGGGCC...CCAGAGAAAGAGCCATGTGAGAAGATTAGAAGGAACAGTGGTGCTGACACAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299130.7 |
||
| CDS-3UTR CCA 90 bp | AGTTTGCCCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTTGGTGGCTTGCTCTAATCTTCTCACATaGCTCTTTCTCTGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLPSQESLSFTPWYLVACSNLLT*LFLWPE Trigger: CTCAGGCCAGAGAAAGAGCCATGTGAGAAGATTAGA...GCAAGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGGCAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR GCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGCTTATTGGTTCTGTGTaGCCCCGCCAGTTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLLIGSV*PRQFFL Trigger: CAGAAAGAACTGGCGGGGGCACACAGAACCAATAAG...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR GCA 90 bp | CAGGAGGGAAAAGTCCAGTACCTGTTTCTCCATCTTAGCCATATGAGACTCTTAACAGACCAACCATTGTaGTGTATCGGAACTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QEGKVQYLFLHLSHMRLLTDQPL*CIGTGS Trigger: GGAACCAGTTCCGATACAGCACAATGGTTGGTCTGT...TAAGAGTCTCATATGGCTAAGATGGAGAAACAGGTACTGGACTTTTCCCTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR TCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGGCTCTCCTCCTGCACTaGGTAGTTGAACTTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLALLLH*VVELEN Trigger: ATTCTCAAGTTCAACTACTCAGTGCAGGAGGAGAGC...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR GCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGCATCAAAAGACCATTTaGCTCCCAGACAAGTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLHQKTI*LPDKCR Trigger: GCGACACTTGTCTGGGAGGCAAATGGTCTTTTGATG...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGGGGCAGAGCGATCTGTaGAGGGACATTAATGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLGQSDL*RDINES Trigger: AGATTCATTAATGTCCCTCCACAGATCGCTCTGCCC...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278100.11 |
||
| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGGTAGCACTTCCCACATaGCTTATTGGTTCTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLVALPT*LIGSVC Trigger: GCACACAGAACCAATAAGCCATGTGGGAAGTGCTAC...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGTCGCAAGGGCGTCATTaGTACGTCATCAAAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLSQGRH*YVIKRP Trigger: TGGTCTTTTGATGACGTACCAATGACGCCCTTGCGA...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR GCA 90 bp | CAGGAGGGAAAAGTCCAGTACCTGTTTCTCCATCTTAGCCATATGAGACTCTTACCAGCTGTTCAACCATaGTCTTTTCACAGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QEGKVQYLFLHLSHMRLLPAVQP*SFHSSS Trigger: AGAAGAACTGTGAAAAGAGCATGGTTGAACAGCTGG...TAAGAGTCTCATATGGCTAAGATGGAGAAACAGGTACTGGACTTTTCCCTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGGGCCCACAGGCTTGGTaGTGTCATTTAAAAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLGPQAW*CHLKTC Trigger: ACAAGTTTTTAAATGACACCACCAAGCCTGTGGGCC...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGGAAGGCCCACAGGCTTaGTGGTGTCATTTAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLEGPQA*WCHLKT Trigger: AGTTTTTAAATGACACCACCAAGCCTGTGGGCCTTC...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| 3UTR CAA 72 bp | TGGGCACTGAATATTTTTGTAGTCCCAGAGGTACTTTaGAGCTTTGTCCTAGGATGCAGTGTGATCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WALNIFVVPEVL*SFVLGCSVILS Trigger: TGAAAGGATCACACTGCATCCTAGGACAAAGCTCAAAAGTACCTCTGGGACTACAAAAATATTCAGTGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR TCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGCGTAGAACCAACTCTTaGATTTGTTCAACACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLRRTNS*ICSTHW Trigger: CCAGTGTGTTGAACAAATTCAAGAGTTGGTTCTACG...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR GCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGCCAGCTGTTCAACCATaGTCTTTTCACAGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLPAVQP*SFHSSS Trigger: AGAAGAACTGTGAAAAGAGCATGGTTGAACAGCTGG...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR GCA 90 bp | GCACTGGATAATGATGGAAATCTTTCTGAATTTGGAATCATCATGTCAGAGTTTTGTGTCAGGTGGCAGTaGCCATCTAGGGTTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALDNDGNLSEFGIIMSEFCVRWQ*PSRVSH Trigger: GTGAGAAACCCTAGATGGGCACTGCCACCTGACACA...AAACTCTGACATGATGATTCCAAATTCAGAAAGATTTCCATCATTATCCAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGCCCATCACTGTCCATTaGAAATGGGTTAGACAGATA | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLPITVH*KWVRQI Trigger: TATCTGTCTAACCCATTTCCAATGGACAGTGATGGG...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGTGTGTCAGAGACACATaGGACAGAACCCTACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLCVRDT*DRTLLF Trigger: AAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| 3UTR CAA 72 bp | TCCTTCACTCCCTGGTATTTGGTGGCTTGCAAACCGTaGTTTCACATATTTTGTCCATTGTTTGCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFTPWYLVACKP*FHIFCPLFACF Trigger: GAAACAAGCAAACAATGGACAAAATATGTGAAACAACGGTTTGCAAGCCACCAAATACCAGGGAGTGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR TCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGCTTTCAGTTTATCCATaGTTTCGTTCATCTTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLLSVYP*FRSSCR Trigger: GCGACAAGATGAACGAAATCATGGATAAACTGAAAG...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR GCA 90 bp | CAGGAGGGAAAAGTCCAGTACCTGTTTCTCCATCTTAGCCATATGAGACTCTTATGCAATGTATTTTCCTaGTTTTCATGCCTCTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: QEGKVQYLFLHLSHMRLLCNVFS*FSCLST Trigger: AGTAGAGAGGCATGAAAAGCAGGAAAATACATTGCA...TAAGAGTCTCATATGGCTAAGATGGAGAAACAGGTACTGGACTTTTCCCTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | TTTCATGCCTCTCTACTGGATGCTAGACATTGTACATTTTACCTTCTTGGGCACTTCATGCCTCTCTACTaGATGCTAGACATTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: FHASLLDARHCTFYLLGHFMPLY*MLDIVH Trigger: ATGTACAATGTCTAGCATCCAGTAGAGAGGCATGAA...GTGCCCAAGAAGGTAAAATGTACAATGTCTAGCATCCAGTAGAGAGGCATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR TCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGATCATTGCTGTCTTCTaGAACATCCGTTTGCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLIIAVF*NIRLLN Trigger: ATTAAGCAAACGGATGTTTCAGAAGACAGCAATGAT...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGATTTGTTCAACACACTaGGTACCCTTTCTTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLICSTH*VPFLSV Trigger: AACTGAAAGAAAGGGTACCCAGTGTGTTGAACAAAT...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS-3UTR CCA 90 bp | GCACTGGATAATGATGGAAATCTTTCTGAATTTGGAATCATCATGTCAGAGTTTCTCCCTGGTATTTGGTaGCTTGCAAACCGTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALDNDGNLSEFGIIMSEFLPGIW*LANRCF Trigger: GAAACAACGGTTTGCAAGCCACCAAATACCAGGGAG...AAACTCTGACATGATGATTCCAAATTCAGAAAGATTTCCATCATTATCCAGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| 3UTR CAA 72 bp | AGAATCACTATCCTTCACTCCCTGGTATTTGGTGGCTaGCAAACCGTTGTTTCACATATTTTGTCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RITILHSLVFGG*QTVVSHILSIV Trigger: AACAATGGACAAAATATGTGAAACAACGGTTTGCAAGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGACTGTCCATTGGAAATaGGTTAGACAGATAGATATT | + |
|
Preference number: 4 (lower is better) Translates to: CVRDTWDRTLLFVEELNLTVHWK*VRQIDI Trigger: AATATCTATCTGTCTAACCCATTTCCAATGGACAGT...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
||
| 3UTR CAA 72 bp | AAATCTGCACTAGGTATAGATTTAGATCGGATCCATTaGAAATTATATTTTGAGGAGCACAGAGCAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: KSALGIDLDRIH*KLYFEEHRAEI Trigger: TATCTCTGCTCTGTGCTCCTCAAAATATAATTTCAAATGGATCCGATCTAAATCTATACCTAGTGCAGATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
||
| CDS-3UTR CAA 90 bp | GGACCCTCCTCGGAGCATGAGCTGGACAATCACAGGGCTCCCCTCCTGAGTTTGTCTTCATCCTTTTCCTaGTCACTGTCATCATCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPSSEHELDNHRAPLLSLSSSFS*SLSSSS Trigger: AGACGATGATGACAGTGACAAGGAAAAGGATGAAGA...CAAACTCAGGAGGGGAGCCCTGTGATTGTCCAGCTCATGCTCCGAGGAGGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
||
| CDS-3UTR CAA 90 bp | GTGGGAACAGGCCCTACCCTAGGTCCTGTGTCAGCACCACTGTTCCTTCTAATCGGAACAGACCAACCATaGTGCTGTATCGGAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VGTGPTLGPVSAPLFLLIGTDQP*CCIGTG Trigger: ACCAGTTCCGATACAGCACAATGGTTGGTCTGTTCC...GATTAGAAGGAACAGTGGTGCTGACACAGGACCTAGGGTAGGGCCTGTTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
||
| CDS-3UTR CAA 90 bp | CTCTCCAGTACTGTGACCGCGAGTTCCGGCCACCTTAGTCTCCCTGGATCCCTGGTGTCATTTAAAAACTaGTCCAGCTGTTCAACCATG | + |
|
Preference number: 5 (lower is better) Translates to: LSSTVTASSGHLSLPGSLVSFKN*SSCSTM Trigger: CATGGTTGAACAGCTGGACAAGTTTTTAAATGACAC...CAGGGATCCAGGGAGACTAAGGTGGCCGGAACTCGCGGTCACAGTACTGGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299130.7 |
||
| CDS-3UTR CAA 90 bp | TCCTGTGTCAGCACCACTGTTCCTTCTAATCTTCTCACATGGCTCTTTCTCTGGTTCCCACATGGCTTATaGGTTCTGTGTGCCCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCVSTTVPSNLLTWLFLWFPHGL*VLCAPA Trigger: GGCGGGGGCACACAGAACCAATAAGCCATGTGGGAA...CCAGAGAAAGAGCCATGTGAGAAGATTAGAAGGAACAGTGGTGCTGACACAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299130.7 |
||
| CDS-3UTR CAA 90 bp | GAGCTGGACAATCACAGGGCTCCCCTCCTGAGTTTGCCCTCTCAAGAATCACTAAGAAGGCCCACAGGCTaGGTGGTGTCATTTAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ELDNHRAPLLSLPSQESLRRPTG*VVSFKN Trigger: GTTTTTAAATGACACCACCAAGCCTGTGGGCCTTCT...TAGTGATTCTTGAGAGGGCAAACTCAGGAGGGGAGCCCTGTGATTGTCCAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299130.7 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGTTCCCACATGGCTTATaGGTTCTGTGTGCCCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: CVRDTWDRTLLFVEELNLFPHGL*VLCAPA Trigger: GGCGGGGGCACACAGAACCAATAAGCCATGTGGGAA...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278100.11 |
||
| CDS-3UTR CAA 90 bp | ACCTTAGTCTCCCTGGATCCCTGGCATTGTTTTCCTACTGCAGGGAGGCTGGCAATTCTTCCTCTGCATTaGCAAACATTAACGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLVSLDPWHCFPTAGRLAILPLH*QTLTQL Trigger: AAGCTGCGTTAATGTTTGCAAATGCAGAGGAAGAAT...TGCCAGCCTCCCTGCAGTAGGAAAACAATGCCAGGGATCCAGGGAGACTAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CAA 90 bp | CTGAGTTTGCCCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTTGGTGGCTGTCCCAGAGGTACTTTaGAGCTTTGTCCTAGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: LSLPSQESLSFTPWYLVAVPEVL*SFVLGC Trigger: GCATCCTAGGACAAAGCTCAAAAGTACCTCTGGGAC...AGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGGCAAACTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299130.7 |
||
| CDS-3UTR CAA 90 bp | AGGTGGCAGTGCCCATCTAGGGTTTCTCACTTGTGTTTTCTACCCAGTGCCCCATCATCCATATCATCATaGCTGTCTTCTGAAACATCC | + |
|
Preference number: 5 (lower is better) Translates to: RWQCPSRVSHLCFLPSAPSSISS*LSSETS Trigger: GGATGTTTCAGAAGACAGCAATGATGATATGGATGA...TGGGGCACTGGGTAGAAAACACAAGTGAGAAACCCTAGATGGGCACTGCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CAA 90 bp | AGGTGGCAGTGCCCATCTAGGGTTTCTCACTTGTGTTTTCTACCCAGTGCCCCAAGTTTGATGCAGGCATaGGAAGACTTAGATTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RWQCPSRVSHLCFLPSAPSLMQA*EDLDYL Trigger: CAGATAATCTAAGTCTTCCAATGCCTGCATCAAACT...TGGGGCACTGGGTAGAAAACACAAGTGAGAAACCCTAGATGGGCACTGCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CAA 90 bp | GAGCTGGACAATCACAGGGCTCCCCTCCTGAGTTTGCCCTCTCAAGAATCACTATATTTTGTCCATTGTTaGCTTGTTTCATGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ELDNHRAPLLSLPSQESLYFVHC*LVSCRR Trigger: CCTCCTGCATGAAACAAGCAAACAATGGACAAAATA...TAGTGATTCTTGAGAGGGCAAACTCAGGAGGGGAGCCCTGTGATTGTCCAGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS TCA 90 bp | ACAGTCATGAAGGTTCCCTGGAAATCACTTAGAGTTGATCTTGATTaGATTAGTCCAGCCTTCAGAGAAACCAGGGCTGTCACTTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TVMKVPWKSLRVDLD*ISPAFRETRAVTCP Trigger: GGGGCAAGTGACAGCCCTGGTTTCTCTGAAGGCTGGACTAATTCAATCAAGATCAACTCTAAGTGATTTCCAGGGAACCTTCATGACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368759.5 |
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| CDS CCA 90 bp | CACAAATGTCTTACTAATCAGAAGGTAAAAGTAGCACTTCCCACATaGCTTATTGGTTCTGTGTGCCCCCGCCAGTTCTTTCTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HKCLTNQKVKVALPT*LIGSVCPRQFFLKL Trigger: CAGCTTCAGAAAGAACTGGCGGGGGCACACAGAACCAATAAGCCATGTGGGAAGTGCTACTTTTACCTTCTGATTAGTAAGACATTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000278100.11 ENST00000299130.7 ENST00000368759.5 |
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| CDS-3UTR CAA 90 bp | CTGAGTTTGCCCTCTCAAGAATCACTATCCTTCACTCCCTGGTATTTGGTGGCTGTGGCTTGCAAACCGTaGTTTCACATATTTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSLPSQESLSFTPWYLVAVACKP*FHIFCP Trigger: TGGACAAAATATGTGAAACAACGGTTTGCAAGCCAC...AGCCACCAAATACCAGGGAGTGAAGGATAGTGATTCTTGAGAGGGCAAACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CAA 90 bp | CAGGAGGGAAAAGTCCAGTACCTGTTTCTCCATCTTAGCCATATGAGACTCTTATCTAGGGTTTCTCACTaGTGTTTTCTACCCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QEGKVQYLFLHLSHMRLLSRVSH*CFLPSA Trigger: GGCACTGGGTAGAAAACACAAGTGAGAAACCCTAGA...TAAGAGTCTCATATGGCTAAGATGGAGAAACAGGTACTGGACTTTTCCCTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS-3UTR CAA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGTTCGCAAGGGCGTCATaGGTACGTCATCAAAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: CVRDTWDRTLLFVEELNLFARAS*VRHQKT Trigger: GGTCTTTTGATGACGTACCAATGACGCCCTTGCGAA...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS TCA 90 bp | TCCCTCCAGGAGACTATGAGCCTCCTAAATATCCCTGACTTATTATaGCAGAGCAATTCCAACAGTCATGAAGGTTCCCTGGAAATCACT | + |
|
Preference number: 5 (lower is better) Translates to: SLQETMSLLNIPDLL*QSNSNSHEGSLEIT Trigger: AGTGATTTCCAGGGAACCTTCATGACTGTTGGAATTGCTCTGTCATAATAAGTCAGGGATATTTAGGAGGCTCATAGTCTCCTGGAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368759.5 |
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| CDS-3UTR CAA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAGAAGGCCCACAGGCTaGGTGGTGTCATTTAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CVRDTWDRTLLFVEELNLRRPTG*VVSFKN Trigger: GTTTTTAAATGACACCACCAAGCCTGTGGGCCTTCT...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS TCA 90 bp | AAAAGACCATTTGCCTCCCAGACAAGTGTCGCTCTCCTCCTGCACTaGGTAGTTGAACTTGAGAATTGCCTTCTCATAGAAAAATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KRPFASQTSVALLLH*VVELENCLLIEKFF Trigger: GAAGAATTTTTCTATGAGAAGGCAATTCTCAAGTTCAACTACTCAGTGCAGGAGGAGAGCGACACTTGTCTGGGAGGCAAATGGTCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS TCA 90 bp | TCAACACACTGGGTACCCTTAATCACACTCCCAATATGGTTCTGTTaGATTAAGAGATCTGTTAGTTCTGCAGTGTTCACAGGAGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: STHWVPLITLPIWFC*IKRSVSSAVFTGAF Trigger: AAAGGCTCCTGTGAACACTGCAGAACTAACAGATCTCTTAATTCAACAGAACCATATTGGGAGTGTGATTAAGGGTACCCAGTGTGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463330.5 |
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| CDS-3UTR CAA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGTCTTCATCCTTTTCCTaGTCACTGTCATCATCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CVRDTWDRTLLFVEELNLSSSFS*SLSSSS Trigger: AGACGATGATGACAGTGACAAGGAAAAGGATGAAGA...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000278100.11 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGAACCAACTCTTGAATTaGTTCAACACACTGGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: CVRDTWDRTLLFVEELNLNQLLN*FNTLGT Trigger: GGTACCCAGTGTGTTGAACAAATTCAAGAGTTGGTT...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
||
| CDS TCA 90 bp | ATGCTCTTTTCACAGTTCTTCTCACAGAAGCGTAGAACCAACTCTTaGATTTGTTCAACACACTGGGTACCCTTAATCACACTCCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: MLFSQFFSQKRRTNS*ICSTHWVPLITLPI Trigger: TATTGGGAGTGTGATTAAGGGTACCCAGTGTGTTGAACAAATTCAAGAGTTGGTTCTACGCTTCTGTGAGAAGAACTGTGAAAAGAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463330.5 |
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| CDS GCA 90 bp | TATGTTTTAATTTATTCTAATACTGGGGGAACAGACCAACCATTGTaGTGTATCGGAACTGGTTCCAATCCTCTTCTTGTGTCTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: YVLIYSNTGGTDQPL*CIGTGSNPLLVSGP Trigger: AGGTCCAGACACAAGAAGAGGATTGGAACCAGTTCCGATACAGCACAATGGTTGGTCTGTTCCCCCAGTATTAGAATAAATTAAAACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299130.7 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGTCATCCATATCATCATaGCTGTCTTCTGAAACATCC | + |
|
Preference number: 5 (lower is better) Translates to: CVRDTWDRTLLFVEELNLSSISS*LSSETS Trigger: GGATGTTTCAGAAGACAGCAATGATGATATGGATGA...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGGTGTCATTTAAAAACTaGTCCAGCTGTTCAACCATG | + |
|
Preference number: 5 (lower is better) Translates to: CVRDTWDRTLLFVEELNLVSFKN*SSCSTM Trigger: CATGGTTGAACAGCTGGACAAGTTTTTAAATGACAC...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000278100.11 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGATTCTTCCTCTGCATTaGCAAACATTAACGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CVRDTWDRTLLFVEELNLILPLH*QTLTQL Trigger: AAGCTGCGTTAATGTTTGCAAATGCAGAGGAAGAAT...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGAGACACATGGGACAGAACCCTACTTTTTGTAGAGGAACTTAATCTGATGATTTCGTTCATCTaGTCGCCTGGAATTAACATC | + |
|
Preference number: 5 (lower is better) Translates to: CVRDTWDRTLLFVEELNLMISFI*SPGINI Trigger: GATGTTAATTCCAGGCGACAAGATGAACGAAATCAT...CAGATTAAGTTCCTCTACAAAAAGTAGGGTTCTGTCCCATGTGTCTCTGACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS TCA 90 bp | TCTGAAACATCCGTTTGCTTAATCACACTCCCAATATGGTTCTGTTaGATTAAGAGATCTGTTAGTTCTGCAGTGTTCACAGGAGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SETSVCLITLPIWFC*IKRSVSSAVFTGAF Trigger: AAAGGCTCCTGTGAACACTGCAGAACTAACAGATCTCTTAATTCAACAGAACCATATTGGGAGTGTGATTAAGCAAACGGATGTTTCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000278100.11 ENST00000299130.7 ENST00000368759.5 ENST00000478798.1 |
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| CDS TCA 90 bp | ATGCTCTTTTCACAGTTCTTCTCACAGAAGCGTAGAACCAACTCTTaGATTTGTTCAACACACTGGGTACCCTTTCTTTCAGTTAAATTT | + |
|
Preference number: 5 (lower is better) Translates to: MLFSQFFSQKRRTNS*ICSTHWVPFLSVKF Trigger: AAATTTAACTGAAAGAAAGGGTACCCAGTGTGTTGAACAAATTCAAGAGTTGGTTCTACGCTTCTGTGAGAAGAACTGTGAAAAGAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000278100.11 ENST00000299130.7 ENST00000368759.5 ENST00000478798.1 |
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| CDS TCA 90 bp | CATTGGAAATGGGTTAGACAGATAGATATTCTTTCAGTTTATCCATaGTTTCGTTCATCTTGTCGCCTGGAATTAACATCACAGTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: HWKWVRQIDILSVYP*FRSSCRLELTSQFA Trigger: TGCGAACTGTGATGTTAATTCCAGGCGACAAGATGAACGAAATCATGGATAAACTGAAAGAATATCTATCTGTCTAACCCATTTCCAATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS GCA 72 bp | TCTTCCTCGTCGCGCTGGACTGGGGGATCCGGCGGCTaGGGAACCCCACTTTCCACGGCACGCCGCTTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSRWTGGSGG*GTPLSTARRLD Trigger: GTCTAAGCGGCGTGCCGTGGAAAGTGGGGTTCCGCAGCCGCCGGATCCCCCAGTCCAGCGCGACGAGGAAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000278100.11 ENST00000299130.7 ENST00000368759.5 |
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| CDS GCA 72 bp | GCAAGGGCGTCATTGGTACGTCATCAAAAGACCATTTaGCTCCCAGACAAGTGTCGCTCTCCTCCTGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ARASLVRHQKTI*LPDKCRSPPAL Trigger: CAGTGCAGGAGGAGAGCGACACTTGTCTGGGAGGCAAATGGTCTTTTGATGACGTACCAATGACGCCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS CAA 72 bp | CGCAAGGGCGTCATTGGTACGTCATCAAAAGACCATTaGCCTCCCAGACAAGTGTCGCTCTCCTCCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: RKGVIGTSSKDH*PPRQVSLSSCT Trigger: AGTGCAGGAGGAGAGCGACACTTGTCTGGGAGGCAAATGGTCTTTTGATGACGTACCAATGACGCCCTTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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| CDS CCA 72 bp | TGGGGGAACAGACCAACCATTGTGCTGTATCGGAACTaGTTCCAATCCTCTTCTTGTGTCTGGACCTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: WGNRPTIVLYRN*FQSSSCVWTSK Trigger: CTTGGAGGTCCAGACACAAGAAGAGGATTGGAACCAGTTCCGATACAGCACAATGGTTGGTCTGTTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299130.7 |
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| CDS GCA 72 bp | AAAGTAGCACTTCCCACATGGCTTATTGGTTCTGTGTaGCCCCGCCAGTTCTTTCTGAAGCTGCTGGTACAT | + |
|
Preference number: 6 (lower is better) Translates to: KVALPTWLIGSV*PRQFFLKLLVH Trigger: ATGTACCAGCAGCTTCAGAAAGAACTGGCGGGGGCACACAGAACCAATAAGCCATGTGGGAAGTGCTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000278100.11 ENST00000299130.7 ENST00000368759.5 |
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| CDS CAA 72 bp | CGCCTGGAATTAACATCACAGTTCGCAAGGGCGTCATaGGTACGTCATCAAAAGACCATTTGCCTCCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLELTSQFARAS*VRHQKTICLPD Trigger: GTCTGGGAGGCAAATGGTCTTTTGATGACGTACCAATGACGCCCTTGCGAACTGTGATGTTAATTCCAGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278100.11 |
||
| CDS CAA 90 bp | TCATCTTGTCGCCTGGAATTAACATCACAGTTCGCAAGGGCGTCATaGGTACGTCATCAAAAGACCATTTGCCTCCCAGACAAGTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSCRLELTSQFARAS*VRHQKTICLPDKCR Trigger: GCGACACTTGTCTGGGAGGCAAATGGTCTTTTGATGACGTACCAATGACGCCCTTGCGAACTGTGATGTTAATTCCAGGCGACAAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000278100.11 |
||
| CDS CCA 72 bp | TCAGAAGGTAAAAGTAGCACTTCCCACATGGCTTATTaGTTCTGTGTGCCCCCGCCAGTTCTTTCTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SEGKSSTSHMAY*FCVPPPVLSEA Trigger: AGCTTCAGAAAGAACTGGCGGGGGCACACAGAACCAATAAGCCATGTGGGAAGTGCTACTTTTACCTTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000278100.11 ENST00000299130.7 ENST00000368759.5 |
||
| CDS TCA 72 bp | TTTGCCTCCCAGACAAGTGTCGCTCTCCTCCTGCACTaGGTAGTTGAACTTGAGAATTGCCTTCTCATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FASQTSVALLLH*VVELENCLLIE Trigger: TTCTATGAGAAGGCAATTCTCAAGTTCAACTACTCAGTGCAGGAGGAGAGCGACACTTGTCTGGGAGGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278100.11 |
||
| CDS CAA 90 bp | TCACTTAGGAGAAGGCCCACAGGCTTGGTGGTGTCATTTAAAAACTaGTCCAGCTGTTCAACCATGCTCTTTTCACAGTTCTTCTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SLRRRPTGLVVSFKN*SSCSTMLFSQFFSQ Trigger: CTGTGAGAAGAACTGTGAAAAGAGCATGGTTGAACAGCTGGACAAGTTTTTAAATGACACCACCAAGCCTGTGGGCCTTCTCCTAAGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000278100.11 ENST00000299130.7 ENST00000368759.5 ENST00000463330.5 |
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| CDS CAA 90 bp | GGAGGGACATTAATGAATCTTTCACTTAGGAGAAGGCCCACAGGCTaGGTGGTGTCATTTAAAAACTTGTCCAGCTGTTCAACCATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GGTLMNLSLRRRPTG*VVSFKNLSSCSTML Trigger: GAGCATGGTTGAACAGCTGGACAAGTTTTTAAATGACACCACCAAGCCTGTGGGCCTTCTCCTAAGTGAAAGATTCATTAATGTCCCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000278100.11 ENST00000299130.7 ENST00000368759.5 ENST00000463330.5 |
||
| CDS CCA 72 bp | CTTACTAATCAGAAGGTAAAAGTAGCACTTCCCACATaGCTTATTGGTTCTGTGTGCCCCCGCCAGTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LTNQKVKVALPT*LIGSVCPRQFF Trigger: AAAGAACTGGCGGGGGCACACAGAACCAATAAGCCATGTGGGAAGTGCTACTTTTACCTTCTGATTAGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000278100.11 ENST00000299130.7 ENST00000368759.5 |
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| CDS TCA 72 bp | GAGACTATGAGCCTCCTAAATATCCCTGACTTATTATaGCAGAGCAATTCCAACAGTCATGAAGGTTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ETMSLLNIPDLL*QSNSNSHEGSL Trigger: CAGGGAACCTTCATGACTGTTGGAATTGCTCTGTCATAATAAGTCAGGGATATTTAGGAGGCTCATAGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368759.5 |
||
| CDS GCA 72 bp | ATTTATTCTAATACTGGGGGAACAGACCAACCATTGTaGTGTATCGGAACTGGTTCCAATCCTCTTCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: IYSNTGGTDQPL*CIGTGSNPLLV Trigger: CACAAGAAGAGGATTGGAACCAGTTCCGATACAGCACAATGGTTGGTCTGTTCCCCCAGTATTAGAATAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299130.7 |
||
| CDS TCA 72 bp | TCACAGTTCTTCTCACAGAAGCGTAGAACCAACTCTTaGATTTGTTCAACACACTGGGTACCCTTTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SQFFSQKRRTNS*ICSTHWVPFLS Trigger: TGAAAGAAAGGGTACCCAGTGTGTTGAACAAATTCAAGAGTTGGTTCTACGCTTCTGTGAGAAGAACTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000278100.11 ENST00000299130.7 ENST00000368759.5 ENST00000478798.1 |
||
| CDS TCA 72 bp | TCACAGTTCTTCTCACAGAAGCGTAGAACCAACTCTTaGATTTGTTCAACACACTGGGTACCCTTAATCACA | + |
|
Preference number: 6 (lower is better) Translates to: SQFFSQKRRTNS*ICSTHWVPLIT Trigger: TGTGATTAAGGGTACCCAGTGTGTTGAACAAATTCAAGAGTTGGTTCTACGCTTCTGTGAGAAGAACTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463330.5 |
||
| CDS CAA 90 bp | TTGTATGTTTTAATTTATTCTAATACTGGGGGAACAGACCAACCATaGTGCTGTATCGGAACTGGTTCCAATCCTCTTCTTGTGTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LYVLIYSNTGGTDQP*CCIGTGSNPLLVSG Trigger: TCCAGACACAAGAAGAGGATTGGAACCAGTTCCGATACAGCACAATGGTTGGTCTGTTCCCCCAGTATTAGAATAAATTAAAACATACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299130.7 |
||
| CDS TCA 72 bp | TGGGTACCCTTAATCACACTCCCAATATGGTTCTGTTaGATTAAGAGATCTGTTAGTTCTGCAGTGTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: WVPLITLPIWFC*IKRSVSSAVFT Trigger: TGTGAACACTGCAGAACTAACAGATCTCTTAATTCAACAGAACCATATTGGGAGTGTGATTAAGGGTACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463330.5 |
||
| CDS CAA 72 bp | TTAATTTATTCTAATACTGGGGGAACAGACCAACCATaGTGCTGTATCGGAACTGGTTCCAATCCTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LIYSNTGGTDQP*CCIGTGSNPLL Trigger: AAGAAGAGGATTGGAACCAGTTCCGATACAGCACAATGGTTGGTCTGTTCCCCCAGTATTAGAATAAATTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299130.7 |
||
| CDS TCA 72 bp | TCCGTTTGCTTAATCACACTCCCAATATGGTTCTGTTaGATTAAGAGATCTGTTAGTTCTGCAGTGTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: SVCLITLPIWFC*IKRSVSSAVFT Trigger: TGTGAACACTGCAGAACTAACAGATCTCTTAATTCAACAGAACCATATTGGGAGTGTGATTAAGCAAACGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000278100.11 ENST00000299130.7 ENST00000368759.5 ENST00000478798.1 |
||
| CDS TCA 72 bp | TGGGTTAGACAGATAGATATTCTTTCAGTTTATCCATaGTTTCGTTCATCTTGTCGCCTGGAATTAACATCA | + |
|
Preference number: 6 (lower is better) Translates to: WVRQIDILSVYP*FRSSCRLELTS Trigger: TGATGTTAATTCCAGGCGACAAGATGAACGAAATCATGGATAAACTGAAAGAATATCTATCTGTCTAACCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000278100.11 |
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