RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCAT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000105552

Ensembl transcript IDs: ENST00000316273.11, ENST00000402551.5, ENST00000545387.6, ENST00000593515.5, ENST00000595376.1, ENST00000596981.1, ENST00000597011.5, ENST00000598162.5, ENST00000599246.5, ENST00000599510.1, ENST00000601496.5, ENST00000601681.5

Found 543 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATaGCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATG +
Preference number: 1 (lower is better)
Translates to: VMGGPEPATRGWGPR*LGRPLRLWECRNHM
Trigger: CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR CCA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATaGGGGCGCCAGAGACCCAGACGCCGCCCGCTGGCCTTTTATTTC +
Preference number: 1 (lower is better)
Translates to: DAWVGPYGFGSVATT*GRQRPRRRPLAFYF
Trigger: GAAATAAAAGGCCAGCGGGCGGCGTCTGGGTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR TCA 90 bp TATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGGCGTaGCGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCCTGCAGC +
Preference number: 1 (lower is better)
Translates to: YCTSGESLVGRRVLA*RDATGRWIWSTACS
Trigger: GCTGCAGGCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR CCA 90 bp ATTAAACAGTCTGGTGCCAGAGAGGGGCCAAGGTCCAGAGGCTCATaGGAGGAAGCTTTCTCCGGCCAAAGGGATAGCCCAGGGCTCCAG +
Preference number: 1 (lower is better)
Translates to: IKQSGAREGPRSRGS*EEAFSGQRDSPGLQ
Trigger: CTGGAGCCCTGGGCTATCCCTTTGGCCGGAGAAAGCTTCCTCCCATGAGCCTCTGGACCTTGGCCCCTCTCTGGCACCAGACTGTTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599246.5
3UTR TCA 90 bp CCCAGACGCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTaGGTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTAC +
Preference number: 1 (lower is better)
Translates to: PRRRPLAFYFVLHFR*VIGREASAGVTRCY
Trigger: GTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR TCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGAGGCGAGTGCTGGCGTaGCGAGATGCTACGGGTCGG +
Preference number: 2 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKRRVLA*RDATGR
Trigger: CCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCT...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR CCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGGATGCTACGGGTCGGTaGATCTGGAGCACAGCCTGC +
Preference number: 2 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLDATGR*IWSTAC
Trigger: GCAGGCTGTGCTCCAGATCCACCGACCCGTAGCATC...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR CCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGGGGGCCAAGATGCCTaGGTCGGCCCTTACGGCTTT +
Preference number: 2 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKGGQDA*VGPYGF
Trigger: AAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCC...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR GCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGCTGGCGTGACGAGATaGTACGGGTCGGTGGATCTG +
Preference number: 2 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKAGVTR*YGSVDL
Trigger: CAGATCCACCGACCCGTAGCATCTCGTCACGCCAGC...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR GCA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCGCTGGCGTGACGAGATaGTACGGGTCGGTGGATCTG +
Preference number: 2 (lower is better)
Translates to: DAWVGPYGFGSVATTWGRAGVTR*YGSVDL
Trigger: CAGATCCACCGACCCGTAGCATCTCGTCACGCCAGC...GCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR TCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGAGTAATGGGCGGACCTaGACCCGCGACGAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGSNGRT*TRDEGL
Trigger: CAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACT...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR GCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGCTGGCGTGACGAGATaGTACGGGTCGGTGGATCTG +
Preference number: 2 (lower is better)
Translates to: LTARQGVMGGPEPATRGWAGVTR*YGSVDL
Trigger: CAGATCCACCGACCCGTAGCATCTCGTCACGCCAGC...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR CCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAAGTGTCGCAACCACATaGGGGCGCCAGAGACCCAGA +
Preference number: 2 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQSVATT*GRQRPR
Trigger: TCTGGGTCTCTGGCGCCCCCATGTGGTTGCGACACT...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR TCA 90 bp CGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAAAGGCGAGTGCTGGCGTaGCGAGATGCTACGGGTCGG +
Preference number: 2 (lower is better)
Translates to: RGQGVSLTARQGVMGGPERRVLA*RDATGR
Trigger: CCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCT...TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR CCA 90 bp GGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGATGCTACGGGTCGGTaGATCTGGAGCACAGCCTGC +
Preference number: 2 (lower is better)
Translates to: GQDAWVGPYGFGSVATTWDATGR*IWSTAC
Trigger: GCAGGCTGTGCTCCAGATCCACCGACCCGTAGCATC...CCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR CAA 90 bp TGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCTaGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACG +
Preference number: 2 (lower is better)
Translates to: WPENGEIRNRGQGVS*TARQGVMGGPEPAT
Trigger: CGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR TCA 90 bp GGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCAGAGACGTATTGCACTTCAGGTaGGTCATTGGTAGGGAGGCG +
Preference number: 2 (lower is better)
Translates to: GSALTALGVSQPHGGARDVLHFR*VIGREA
Trigger: CGCCTCCCTACCAATGACTCACCTGAAGTGCAATAC...GTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR TCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCAGGCGAGTGCTGGCGTaGCGAGATGCTACGGGTCGG +
Preference number: 2 (lower is better)
Translates to: KNQRQHQGSGLRTERSGIRRVLA*RDATGR
Trigger: CCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCT...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR GCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGGCTGGCGTGACGAGATaGTACGGGTCGGTGGATCTG +
Preference number: 2 (lower is better)
Translates to: QGVSLTARQGVMGGPEPAAGVTR*YGSVDL
Trigger: CAGATCCACCGACCCGTAGCATCTCGTCACGCCAGC...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR CCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGGATGCTACGGGTCGGTaGATCTGGAGCACAGCCTGC +
Preference number: 2 (lower is better)
Translates to: QGVSLTARQGVMGGPEPADATGR*IWSTAC
Trigger: GCAGGCTGTGCTCCAGATCCACCGACCCGTAGCATC...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR CCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGAGTGTCGCAACCACATaGGGGCGCCAGAGACCCAGA +
Preference number: 2 (lower is better)
Translates to: QGVSLTARQGVMGGPEPASVATT*GRQRPR
Trigger: TCTGGGTCTCTGGCGCCCCCATGTGGTTGCGACACT...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR CCA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGGGGGGCCAAGATGCCTaGGTCGGCCCTTACGGCTTT +
Preference number: 2 (lower is better)
Translates to: DPESGPRCILDRTTRSNGGGQDA*VGPYGF
Trigger: AAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCC...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR TCA 90 bp GGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGTATTGCACTTCAGGTaGGTCATTGGTAGGGAGGCG +
Preference number: 2 (lower is better)
Translates to: GQDAWVGPYGFGSVATTWVLHFR*VIGREA
Trigger: CGCCTCCCTACCAATGACTCACCTGAAGTGCAATAC...CCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR CCA 90 bp ATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGATGCTACGGGTCGGTaGATCTGGAGCACAGCCTGC +
Preference number: 2 (lower is better)
Translates to: IRNRGQGVSLTARQGVMGDATGR*IWSTAC
Trigger: GCAGGCTGTGCTCCAGATCCACCGACCCGTAGCATC...GCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR CCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGGCCAAGATGCCTaGGTCGGCCCTTACGGCTTT +
Preference number: 2 (lower is better)
Translates to: KNQRQHQGSGLRTERSGIGGQDA*VGPYGF
Trigger: AAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCC...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR CCA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCCAGACGCCGCCCGCTaGCCTTTTATTTCGTATTGC +
Preference number: 2 (lower is better)
Translates to: DPESGPRCILDRTTRSNGPDAAR*PFISYC
Trigger: GCAATACGAAATAAAAGGCCAGCGGGCGGCGTCTGG...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR GCA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCCTTTTATTTCGTATTaGACTTCAGGTGAGTCATTG +
Preference number: 2 (lower is better)
Translates to: DPESGPRCILDRTTRSNGPFISY*TSGESL
Trigger: CAATGACTCACCTGAAGTGCAATACGAAATAAAAGG...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR GCA 72 bp GGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATaGCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGC +
Preference number: 3 (lower is better)
Translates to: GPEPATRGWGPR*LGRPLRLWECR
Trigger: GCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR CCA 72 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTaGGAGTGTCGCAACCACATGGGGGCGCCAGAGACC +
Preference number: 3 (lower is better)
Translates to: WGPRCLGRPLRL*ECRNHMGAPET
Trigger: GGTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR TCA 72 bp ATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTaGACCCGCGACGAGGGGCTGGGGGCCAAGATGCCT +
Preference number: 3 (lower is better)
Translates to: ILDRTTRSNGRT*TRDEGLGAKMP
Trigger: AGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR GCA 72 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATaGTACGGGTCGGTGGATCTGGAGCACAGCCTGCAG +
Preference number: 3 (lower is better)
Translates to: VIGREASAGVTR*YGSVDLEHSLQ
Trigger: CTGCAGGCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR TCA 72 bp TCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGGCGTaGCGAGATGCTACGGGTCGGTGGATCTGGAGCACA +
Preference number: 3 (lower is better)
Translates to: SGESLVGRRVLA*RDATGRWIWST
Trigger: TGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGACTCACCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR-3UTR CAA 90 bp ATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCTCGGCCCTTACGGCTTaGGGAGTGTCGCAACCACAT +
Preference number: 3 (lower is better)
Translates to: IRNRGQGVSLTARQGVMGSALTA*GVSQPH
Trigger: ATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGA...GCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR TCA 72 bp GAGCCGCAGAGGATCACAGGAAGGGGTTTCCAAAGCTaGAGACATATCCAGGGCTCCGGGAGCTCCCAGGAA +
Preference number: 3 (lower is better)
Translates to: EPQRITGRGFQS*RHIQGSGSSQE
Trigger: TTCCTGGGAGCTCCCGGAGCCCTGGATATGTCTTCAGCTTTGGAAACCCCTTCCTGTGATCCTCTGCGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599246.5
3UTR TCA 72 bp CGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTaGGTCATTGGTAGGGAGGCGAGTGCTGGCGTGACG +
Preference number: 3 (lower is better)
Translates to: RPLAFYFVLHFR*VIGREASAGVT
Trigger: CGTCACGCCAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR GCA 72 bp GACCCAGACGCCGCCCGCTGGCCTTTTATTTCGTATTaGACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTG +
Preference number: 3 (lower is better)
Translates to: DPDAARWPFISY*TSGESLVGRRV
Trigger: CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTCTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGCCACCCAGGCCCGGATaGAGGCTGGGTCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLPPRPG*RLGRPG
Trigger: TCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGG...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGCTGCCCCAGAGCGGCTaGGGCCATGATCCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLLPQSG*GHDPCG
Trigger: GCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAG...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316273.11
ENST00000402551.5
CDS-3UTR CCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGAGCGCGCGCGTGGGCTaGCTGACACCCAGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKSARVG*LTPSEG
Trigger: GCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCT...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCAGCGCGCGCGTGGGCTaGCTGACACCCAGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: DAWVGPYGFGSVATTWGRSARVG*LTPSEG
Trigger: GCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCT...GCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAACGCGCGTGGGCTGGCTaGCACCCAGCGAGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQRAWAG*HPARAR
Trigger: ACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCG...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGCGCGCGTGGGCTGGCTaGCACCCAGCGAGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: LTARQGVMGGPEPATRGWRAWAG*HPARAR
Trigger: ACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCG...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGCCACCCAGGCCCGGATaGAGGCTGGGTCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKPPRPG*RLGRPG
Trigger: TCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGG...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCCACCCAGGCCCGGATaGAGGCTGGGTCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: DAWVGPYGFGSVATTWGRPPRPG*RLGRPG
Trigger: TCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGG...GCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCAGCGCGCGCGTGGGCTaGCTGACACCCAGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSSARVG*LTPSEG
Trigger: GCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCT...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGTGGTTCCCACCTCGGTaGGCTGGTGGTCGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLWFPPR*AGGRAH
Trigger: ATGGGCCCGACCACCAGCTCACCGAGGTGGGAACCA...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGCTGCCCCAGAGCGGCTaGGGCCATGATCCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LTARQGVMGGPEPATRGWLPQSG*GHDPCG
Trigger: GCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAG...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316273.11
ENST00000402551.5
CDS-3UTR GCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGCACATAGAGGCTGGTaGCGGCGGCATCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKAHRGW*RRHRGP
Trigger: GGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGC...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGGCAGGCACAGGCGCATaGCTGAGCGCAGCATCCGGT +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLAGTGA*LSAASG
Trigger: ACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGC...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGCCGCACATAGAGGCTaGTGCCGGCGGCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKAAHRG*CRRHRG
Trigger: TCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGC...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCGCCGCACATAGAGGCTaGTGCCGGCGGCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: DAWVGPYGFGSVATTWGRAAHRG*CRRHRG
Trigger: TCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGC...GCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGAGCGGCTGCGGCCATaGTCCGTGCGGCGCGTAACT +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQERLRP*SVRRVT
Trigger: AGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTC...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316273.11
ENST00000402551.5
CDS-3UTR TCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGCATCCGGTCCATGTTaGGCCAGGGGCGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKASGPC*ARGGRG
Trigger: GCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGC...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGCACAGGCGCATGGCTaGGCGCAGCATCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKAQAHG*AQHPVH
Trigger: ATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGC...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCGCGCGTGGGCTGGCTaGCACCCAGCGAGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDRAWAG*HPARAR
Trigger: ACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCG...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGCCACTGGGCAGAGAATaGCGAACAGGAGCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKPLGRE*RTGARA
Trigger: CGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGG...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCTGGTTCCCACCTCGGTaGGCTGGTGGTCGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: DAWVGPYGFGSVATTWGRWFPPR*AGGRAH
Trigger: ATGGGCCCGACCACCAGCTCACCGAGGTGGGAACCA...GCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCAGGCGAGTGCTGGCGTaGCGAGATGCTACGGGTCGG +
Preference number: 4 (lower is better)
Translates to: DAWVGPYGFGSVATTWGRRRVLA*RDATGR
Trigger: CCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCT...GCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGCCAGGGATTCCGGGGTaGTCAGAGCGTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKPGIPG*SERGSP
Trigger: TGGGGACCCACGCTCTGATCACCCCGGAATCCCTGG...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR GCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGGCACATAGAGGCTGGTaGCGGCGGCATCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLEAHRGW*RRHRGP
Trigger: GGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGC...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGAGCGCGCGCGTGGGCTaGCTGACACCCAGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGSARVG*LTPSEG
Trigger: GCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCT...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGACCTCGGTGAGCTGGTaGTCGGGCCCATACAGCCAG +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLTSVSW*SGPYSQ
Trigger: CTGGCTGTATGGGCCCGACCACCAGCTCACCGAGGT...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGTGCACTGGGCAGACCTaGCAAGCGGTGCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKCTGQT*QAVPEP
Trigger: TGGCTCGGGCACCGCTTGCCAGGTCTGCCCAGTGCA...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp AAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGAGCGGCTGCGGCCATaGTCCGTGCGGCGCGTAACT +
Preference number: 4 (lower is better)
Translates to: KMPGSALTALGVSQPHGGERLRP*SVRRVT
Trigger: AGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTC...GCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316273.11
ENST00000402551.5
CDS-3UTR TCA 90 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACGCATCCGGTCCATGTTaGGCCAGGGGCGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: WGPRCLGRPLRLWECRNHASGPC*ARGGRG
Trigger: GCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGC...GTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGCCTTGTCCACTTCGATaGGCCGGCGGATGCACTCCA +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLPCPLR*AGGCTP
Trigger: TGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGG...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAACCACTGGGCAGAGAATaGCGAACAGGAGCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQPLGRE*RTGARA
Trigger: CGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGG...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGCCACCCAGGCCCGGATaGAGGCTGGGTCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGPPRPG*RLGRPG
Trigger: TCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGG...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGAGGCGAGTGCTGGCGTaGCGAGATGCTACGGGTCGG +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLERRVLA*RDATGR
Trigger: CCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCT...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCAGTAATGGGCGGACCTaGACCCGCGACGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSSNGRT*TRDEGL
Trigger: CAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACT...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGAGTAATGGGCGGACCTaGACCCGCGACGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLESNGRT*TRDEGL
Trigger: CAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACT...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGACCAGGGGTCTGGCCTaGGAACGGAGAGATCCGGAA +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLTRGLA*ERRDPE
Trigger: TTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGT...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCAGAGACGTGGTCTTGCTGGTGTaGGGCTCCAGGGATTCCGGG +
Preference number: 4 (lower is better)
Translates to: GSALTALGVSQPHGGARDVVLLV*GSRDSG
Trigger: CCCGGAATCCCTGGAGCCTCACACCAGCAAGACCAC...GTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR GCA 90 bp CCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCGCACATAGAGGCTGGTaGCGGCGGCATCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: PGVWPENGEIRNRGQGVSAHRGW*RRHRGP
Trigger: GGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGC...GGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGAGACCTGGCAAGCGGTaGCCGAGCCAAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLRPGKR*PSQRLP
Trigger: GGGAAGTCTTTGGCTCGGGCACCGCTTGCCAGGTCT...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGAGGCTGGAGGAGGCTaGGTGCAGCGTGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKEAGGG*VQREVL
Trigger: CAGAACCTCACGCTGCACCCAGCCTCCTCCAGCCTC...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACGCAGGCACAGGCGCATaGCTGAGCGCAGCATCCGGT +
Preference number: 4 (lower is better)
Translates to: WGPRCLGRPLRLWECRNHAGTGA*LSAASG
Trigger: ACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGC...GTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGGCAGGCACAGGCGCATaGCTGAGCGCAGCATCCGGT +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLEAGTGA*LSAASG
Trigger: ACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGC...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGACCTCGGTGAGCTGGTaGTCGGGCCCATACAGCCAG +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKTSVSW*SGPYSQ
Trigger: CTGGCTGTATGGGCCCGACCACCAGCTCACCGAGGT...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGCCCACCTCGGTGAGCTaGTGGTCGGGCCCATACAGC +
Preference number: 4 (lower is better)
Translates to: LTARQGVMGGPEPATRGWPTSVS*WSGPYS
Trigger: GCTGTATGGGCCCGACCACCAGCTCACCGAGGTGGG...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCTGCACTGGGCAGACCTaGCAAGCGGTGCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSCTGQT*QAVPEP
Trigger: TGGCTCGGGCACCGCTTGCCAGGTCTGCCCAGTGCA...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGGCAGCACCAGGGGTCTaGCCTGAGAACGGAGAGATC +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLAAPGV*PENGEI
Trigger: GATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGC...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGCATCCGGTCCATGTTaGGCCAGGGGCGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GQDAWVGPYGFGSVATTWASGPC*ARGGRG
Trigger: GCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGC...CCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGCACAGGCGCATGGCTaGGCGCAGCATCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMAQAHG*AQHPVH
Trigger: ATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGC...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CCCAAGGGGTTTTCCAGGCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCGCACAGGCGCATGGCTaGGCGCAGCATCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: PKGFSRPQSSTESPLSRAAQAHG*AQHPVH
Trigger: ATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGC...GGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGCCTGGAAAACCCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR TCA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCCTTGTCCACTTCGATaGGCCGGCGGATGCACTCCA +
Preference number: 4 (lower is better)
Translates to: DAWVGPYGFGSVATTWGRPCPLR*AGGCTP
Trigger: TGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGG...GCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp ATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCCGCGCGTGGGCTGGCTaGCACCCAGCGAGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: IRNRGQGVSLTARQGVMGRAWAG*HPARAR
Trigger: ACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCG...GCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp AGGCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCCGCGCGTGGGCTGGCTaGCACCCAGCGAGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: RPQSSTESPLSRASIRKARAWAG*HPARAR
Trigger: ACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCG...GGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGCAACTGCTTCATGGTaGTCGTGCGCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKATASW*SCAPPP
Trigger: GGGTGGTGGAGCGCACGATCACCATGAAGCAGTTGC...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCAGTAATGGGCGGACCTaGACCCGCGACGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGVWPENGEIRNRGQGVSSNGRT*TRDEGL
Trigger: CAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACT...GGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCAGAGACACCAGGGGTCTGGCCTaGGAACGGAGAGATCCGGAA +
Preference number: 4 (lower is better)
Translates to: GSALTALGVSQPHGGARDTRGLA*ERRDPE
Trigger: TTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGT...GTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGTCACTTGTCGCTAGGTaGGTTGCTGGGAGATGGGCC +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLSLVAR*VAGRWA
Trigger: GGCCCATCTCCCAGCAACTCACCTAGCGACAAGTGA...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR GCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCACATAGAGGCTGGTaGCGGCGGCATCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGAHRGW*RRHRGP
Trigger: GGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGC...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCAGAGACCACCTAACTTGTAGTTaGCGACCCCGCCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: GSALTALGVSQPHGGARDHLTCS*RPRPPR
Trigger: CCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTG...GTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCAGGGCCCGCAGCAACTaGTTCATGGTGATCGTGCGC +
Preference number: 4 (lower is better)
Translates to: DAWVGPYGFGSVATTWGRRARSN*FMVIVR
Trigger: GCGCACGATCACCATGAAGCAGTTGCTGCGGGCCCT...GCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGTTGCAGCCATGCTTCTaGCCCAGAGCGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMLQPCF*PRAAAA
Trigger: GGCCGCAGCCGCTCTGGGGCAGAAGCATGGCTGCAA...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR GCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAACCTGCAGCGTGGTCTTaGTGGTGTGAGGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQPAAWS*WCEAPG
Trigger: CCCTGGAGCCTCACACCAGCAAGACCACGCTGCAGG...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR GCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGCTGGGAGATGGGCCTaGAGCGTGGTCTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQAGRWA*SVVLLV
Trigger: CACCAGCAAGACCACGCTGCAGGCCCATCTCCCAGC...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR CCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGCTGGATTCGGGGCTaGCCCCAGCCCTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQGWIRG*PQPLSF
Trigger: GAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCC...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGGGCTGGATTCGGGGCTaGCCCCAGCCCTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLEGWIRG*PQPLSF
Trigger: GAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCC...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCAGGTTCTGGAAGGGCTaGATTCGGGGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSRFWKG*IRGWPQ
Trigger: CTGGGGCCAGCCCCGAATCCAGCCCTTCCAGAACCT...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGAGGTTCTGGAAGGGCTaGATTCGGGGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LTARQGVMGGPEPATRGWRFWKG*IRGWPQ
Trigger: CTGGGGCCAGCCCCGAATCCAGCCCTTCCAGAACCT...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCTGCAGCGTGAGGTTCTaGAAGGGCTGGATTCGGGGC +
Preference number: 4 (lower is better)
Translates to: DAWVGPYGFGSVATTWGRCSVRF*KGWIRG
Trigger: GCCCCGAATCCAGCCCTTCCAGAACCTCACGCTGCA...GCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGCAGGCACAGGCGCATaGCTGAGCGCAGCATCCGGT +
Preference number: 4 (lower is better)
Translates to: GQDAWVGPYGFGSVATTWAGTGA*LSAASG
Trigger: ACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGC...CCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCGCAGGCACAGGCGCATaGCTGAGCGCAGCATCCGGT +
Preference number: 4 (lower is better)
Translates to: PGVWPENGEIRNRGQGVSAGTGA*LSAASG
Trigger: ACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGC...GGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATGCCGCACATAGAGGCTaGTGCCGGCGGCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDAAHRG*CRRHRG
Trigger: TCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGC...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGGCTGGCTAAGGTCTCAGTGATTCATGGAAAGGGCCTTTCTCCCACCAGGGCAAGCGCGCGCGTGGGCTaGCTGACACCCAGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: GLAKVSVIHGKGLSPTRASARVG*LTPSEG
Trigger: GCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCT...TGCCCTGGTGGGAGAAAGGCCCTTTCCATGAATCACTGAGACCTTAGCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR CCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGACCTCGGTGAGCTGGTaGTCGGGCCCATACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LTARQGVMGGPEPATRGWTSVSW*SGPYSQ
Trigger: CTGGCTGTATGGGCCCGACCACCAGCTCACCGAGGT...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CCCAAGGGGTTTTCCAGGCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTGCACTGGGCAGACCTaGCAAGCGGTGCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: PKGFSRPQSSTESPLSRACTGQT*QAVPEP
Trigger: TGGCTCGGGCACCGCTTGCCAGGTCTGCCCAGTGCA...GGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGCCTGGAAAACCCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR CCA 90 bp GGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCAGAGACCAGGATTCGGTGCACTaGGCAGACCTGGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: GSALTALGVSQPHGGARDQDSVH*ADLASG
Trigger: ACCGCTTGCCAGGTCTGCCCAGTGCACCGAATCCTG...GTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCAGTGTCGCAACCACATaGGGGCGCCAGAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: DAWVGPYGFGSVATTWGRSVATT*GRQRPR
Trigger: TCTGGGTCTCTGGCGCCCCCATGTGGTTGCGACACT...GCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGGGGGGCCAAGATGCCTaGGTCGGCCCTTACGGCTTT +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLEGGQDA*VGPYGF
Trigger: AAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCC...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACGGGGGCCAAGATGCCTaGGTCGGCCCTTACGGCTTT +
Preference number: 4 (lower is better)
Translates to: WGPRCLGRPLRLWECRNHGGQDA*VGPYGF
Trigger: AAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCC...GTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCGCAGCACCAGGGGTCTaGCCTGAGAACGGAGAGATC +
Preference number: 4 (lower is better)
Translates to: DAWVGPYGFGSVATTWGRAAPGV*PENGEI
Trigger: GATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGC...GCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGCAGCTACAGGGGCCTaGGGAGCCACTGCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMAATGA*GATAVL
Trigger: GAGGACTGCAGTGGCTCCCCAGGCCCCTGTAGCTGC...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR TCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCACAGGCGCATGGCTaGGCGCAGCATCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGAQAHG*AQHPVH
Trigger: ATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGC...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGGCACAGGCGCATGGCTaGGCGCAGCATCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: PESGPRCILDRTTRSNGRAQAHG*AQHPVH
Trigger: ATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGC...CCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGCCACTGGGCAGAGAATaGCGAACAGGAGCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: PESGPRCILDRTTRSNGRPLGRE*RTGARA
Trigger: CGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGG...CCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATTGGTTCCCACCTCGGTaGGCTGGTGGTCGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDWFPPR*AGGRAH
Trigger: ATGGGCCCGACCACCAGCTCACCGAGGTGGGAACCA...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGAACTCACCCCAGGTCTaGGCCATGTCCAGTAGACTC +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLNSPQV*AMSSRL
Trigger: GAGTCTACTGGACATGGCTCAGACCTGGGGTGAGTT...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGGCAACTGCTTCATGGTaGTCGTGCGCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLEATASW*SCAPPP
Trigger: GGGTGGTGGAGCGCACGATCACCATGAAGCAGTTGC...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGAGGCGAGTGCTGGCGTaGCGAGATGCTACGGGTCGG +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGRRVLA*RDATGR
Trigger: CCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCT...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATAGGCGAGTGCTGGCGTaGCGAGATGCTACGGGTCGG +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDRRVLA*RDATGR
Trigger: CCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCT...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACACCAGGGGTCTGGCCTaGGAACGGAGAGATCCGGAA +
Preference number: 4 (lower is better)
Translates to: WGPRCLGRPLRLWECRNHTRGLA*ERRDPE
Trigger: TTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGT...GTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp AGGCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCCTGCCCCAGAGCGGCTaGGGCCATGATCCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: RPQSSTESPLSRASIRKALPQSG*GHDPCG
Trigger: GCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAG...GGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGCGGAAGAGGCGCACCTaGTGGTCTTTGCCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLRKRRT*WSLPLN
Trigger: GTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCG...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCCACCTAACTTGTAGTTaGCGACCCCGCCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSHLTCS*RPRPPR
Trigger: CCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTG...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACAGACCTGGCAAGCGGTaGCCGAGCCAAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: WGPRCLGRPLRLWECRNHRPGKR*PSQRLP
Trigger: GGGAAGTCTTTGGCTCGGGCACCGCTTGCCAGGTCT...GTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGATCTGGAGCACAGCCTaGAGCTTCACACCGGGAACA +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLIWSTA*SFTPGT
Trigger: TGTTCCCGGTGTGAAGCTGCAGGCTGTGCTCCAGAT...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCGCTGGCGTGACGAGATaGTACGGGTCGGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSAGVTR*YGSVDL
Trigger: CAGATCCACCGACCCGTAGCATCTCGTCACGCCAGC...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACCACTGCAGTCCTCACTaGATGAGGCTCAGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: WGPRCLGRPLRLWECRNHHCSPH*MRLRRV
Trigger: GACCCGCCTGAGCCTCATGCAGTGAGGACTGCAGTG...GTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR GCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCTCCTCCTCCGCGCCCTaGAGCGGAACCCCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: KNQRQHQGSGLRTERSGISSSAP*SGTPGR
Trigger: CCGCCCTGGGGTTCCGCTGCAGGGCGCGGAGGAGGA...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000597011.5
CDS-3UTR CCA 90 bp CCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCGGCTGGATTCGGGGCTaGCCCCAGCCCTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: PGVWPENGEIRNRGQGVSGWIRG*PQPLSF
Trigger: GAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCC...GGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGAGGCTGGAGGAGGCTaGGTGCAGCGTGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: GQDAWVGPYGFGSVATTWEAGGG*VQREVL
Trigger: CAGAACCTCACGCTGCACCCAGCCTCCTCCAGCCTC...CCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGACCTCGGTGAGCTGGTaGTCGGGCCCATACAGCCAG +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMTSVSW*SGPYSQ
Trigger: CTGGCTGTATGGGCCCGACCACCAGCTCACCGAGGT...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGACCTCGGTGAGCTGGTaGTCGGGCCCATACAGCCAG +
Preference number: 4 (lower is better)
Translates to: GQDAWVGPYGFGSVATTWTSVSW*SGPYSQ
Trigger: CTGGCTGTATGGGCCCGACCACCAGCTCACCGAGGT...CCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCCCACCTCGGTGAGCTaGTGGTCGGGCCCATACAGC +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDPTSVS*WSGPYS
Trigger: GCTGTATGGGCCCGACCACCAGCTCACCGAGGTGGG...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGCCCACCTCGGTGAGCTaGTGGTCGGGCCCATACAGC +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGPTSVS*WSGPYS
Trigger: GCTGTATGGGCCCGACCACCAGCTCACCGAGGTGGG...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATTGCACTGGGCAGACCTaGCAAGCGGTGCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDCTGQT*QAVPEP
Trigger: TGGCTCGGGCACCGCTTGCCAGGTCTGCCCAGTGCA...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCAGGATTCGGTGCACTaGGCAGACCTGGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLEQDSVH*ADLASG
Trigger: ACCGCTTGCCAGGTCTGCCCAGTGCACCGAATCCTG...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACGATGCTACGGGTCGGTaGATCTGGAGCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: WGPRCLGRPLRLWECRNHDATGR*IWSTAC
Trigger: GCAGGCTGTGCTCCAGATCCACCGACCCGTAGCATC...GTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGCCAGACGCCGCCCGCTaGCCTTTTATTTCGTATTGC +
Preference number: 4 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLPDAAR*PFISYC
Trigger: GCAATACGAAATAAAAGGCCAGCGGGCGGCGTCTGG...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGGGGGCCAAGATGCCTaGGTCGGCCCTTACGGCTTT +
Preference number: 4 (lower is better)
Translates to: KMPGSALTALGVSQPHGGGGQDA*VGPYGF
Trigger: AAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCC...GCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCGGGGGCCAAGATGCCTaGGTCGGCCCTTACGGCTTT +
Preference number: 4 (lower is better)
Translates to: PGVWPENGEIRNRGQGVSGGQDA*VGPYGF
Trigger: AAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCC...GGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCGCAGCACCAGGGGTCTaGCCTGAGAACGGAGAGATC +
Preference number: 4 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSAAPGV*PENGEI
Trigger: GATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGC...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGATGGGCCTGCAGCGTaGTCTTGCTGGTGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LTARQGVMGGPEPATRGWDGPAA*SCWCEA
Trigger: AGCCTCACACCAGCAAGACCACGCTGCAGGCCCATC...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR CCA 90 bp AAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCCCTGTGGGGAGGCGTTaGGGCGTGAGGTTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: KMPGSALTALGVSQPHGGPVGRR*GVRLRE
Trigger: CTCTCTCAACCTCACGCCCCAACGCCTCCCCACAGG...GCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR TCA 90 bp CAGGAAGGGGTTTCCAAAGCTGAAGACATATCCAGGGCTCCGGGAGCTCCCAGGGCATCCGGTCCATGTTaGGCCAGGGGCGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: QEGVSKAEDISRAPGAPRASGPC*ARGGRG
Trigger: GCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGC...CCTGGGAGCTCCCGGAGCCCTGGATATGTCTTCAGCTTTGGAAACCCCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR TCA 90 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACAGGGCTCGTTCCCAATaGGCACAGGCCGCACATAGA +
Preference number: 4 (lower is better)
Translates to: WGPRCLGRPLRLWECRNHRARSQ*AQAAHR
Trigger: TCTATGTGCGGCCTGTGCTCATTGGGAACGAGCCCT...GTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGAGGGCTCGTTCCCAATaGGCACAGGCCGCACATAGA +
Preference number: 4 (lower is better)
Translates to: LTARQGVMGGPEPATRGWRARSQ*AQAAHR
Trigger: TCTATGTGCGGCCTGTGCTCATTGGGAACGAGCCCT...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGCCACTGGGCAGAGAATaGCGAACAGGAGCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: QGVSLTARQGVMGGPEPAPLGRE*RTGARA
Trigger: CGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGG...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAATGGTTCCCACCTCGGTaGGCTGGTGGTCGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RGQGVSLTARQGVMGGPEWFPPR*AGGRAH
Trigger: ATGGGCCCGACCACCAGCTCACCGAGGTGGGAACCA...TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGCAACTGCTTCATGGTaGTCGTGCGCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMATASW*SCAPPP
Trigger: GGGTGGTGGAGCGCACGATCACCATGAAGCAGTTGC...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGACCAGGGGTCTGGCCTaGGAACGGAGAGATCCGGAA +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMTRGLA*ERRDPE
Trigger: TTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGT...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CCCAAGGGGTTTTCCAGGCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCCACCTAACTTGTAGTTaGCGACCCCGCCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: PKGFSRPQSSTESPLSRAHLTCS*RPRPPR
Trigger: CCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTG...GGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGCCTGGAAAACCCCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR GCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGTTGAGTGCCTCCTGTTaGACTAACACGGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKLSASC*TNTVGP
Trigger: TGGGCCCACCGTGTTAGTGCAACAGGAGGCACTCAA...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCAGAGACTTGAGTGCCTCCTGTTaGACTAACACGGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSALTALGVSQPHGGARDLSASC*TNTVGP
Trigger: TGGGCCCACCGTGTTAGTGCAACAGGAGGCACTCAA...GTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp AAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCAGGGCCCGCAGCAACTaGTTCATGGTGATCGTGCGC +
Preference number: 4 (lower is better)
Translates to: KMPGSALTALGVSQPHGGRARSN*FMVIVR
Trigger: GCGCACGATCACCATGAAGCAGTTGCTGCGGGCCCT...GCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCAGAGACATCTGGAGCACAGCCTaGAGCTTCACACCGGGAACA +
Preference number: 4 (lower is better)
Translates to: GSALTALGVSQPHGGARDIWSTA*SFTPGT
Trigger: TGTTCCCGGTGTGAAGCTGCAGGCTGTGCTCCAGAT...GTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCGCTGGCGTGACGAGATaGTACGGGTCGGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: PGVWPENGEIRNRGQGVSAGVTR*YGSVDL
Trigger: CAGATCCACCGACCCGTAGCATCTCGTCACGCCAGC...GGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGCTGGCGTGACGAGATaGTACGGGTCGGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMAGVTR*YGSVDL
Trigger: CAGATCCACCGACCCGTAGCATCTCGTCACGCCAGC...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp AAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCTGGCGTGACGAGATaGTACGGGTCGGTGGATCTG +
Preference number: 4 (lower is better)
Translates to: KMPGSALTALGVSQPHGGAGVTR*YGSVDL
Trigger: CAGATCCACCGACCCGTAGCATCTCGTCACGCCAGC...GCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAACGTGGGTCCCCAGATTaGCTTTGGGTGGCGACATCT +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQRGSPD*LWVATS
Trigger: AGATGTCGCCACCCAAAGGCAATCTGGGGACCCACG...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR CCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGCCCACCTCGGTGAGCTaGTGGTCGGGCCCATACAGC +
Preference number: 4 (lower is better)
Translates to: QGVSLTARQGVMGGPEPAPTSVS*WSGPYS
Trigger: GCTGTATGGGCCCGACCACCAGCTCACCGAGGTGGG...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGCAGGATTCGGTGCACTaGGCAGACCTGGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMQDSVH*ADLASG
Trigger: ACCGCTTGCCAGGTCTGCCCAGTGCACCGAATCCTG...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCACGGGTCGGTGGATCTaGAGCACAGCCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PGVWPENGEIRNRGQGVSTGRWI*STACSF
Trigger: GAAGCTGCAGGCTGTGCTCCAGATCCACCGACCCGT...GGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGATGCTACGGGTCGGTaGATCTGGAGCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMDATGR*IWSTAC
Trigger: GCAGGCTGTGCTCCAGATCCACCGACCCGTAGCATC...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAACGGCCCTTACGGCTTTaGGAGTGTCGCAACCACATG +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQRPLRL*ECRNHM
Trigger: CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCG...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGCGGCCCTTACGGCTTTaGGAGTGTCGCAACCACATG +
Preference number: 4 (lower is better)
Translates to: LTARQGVMGGPEPATRGWRPLRL*ECRNHM
Trigger: CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCG...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGCAGCGTGGTCTTGCTaGTGTGAGGCTCCAGGGATT +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQAAWSC*CEAPGI
Trigger: AATCCCTGGAGCCTCACACCAGCAAGACCACGCTGC...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR TCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCCTTGTCCACTTCGATaGGCCGGCGGATGCACTCCA +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDPCPLR*AGGCTP
Trigger: TGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGG...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGAACTCACCCCAGGTCTaGGCCATGTCCAGTAGACTC +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLENSPQV*AMSSRL
Trigger: GAGTCTACTGGACATGGCTCAGACCTGGGGTGAGTT...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCTCCACTCGTGGGCTCTaGTTCCGTACTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSSTRGL*FRTGSP
Trigger: AGGAGATCCAGTACGGAATCAGAGCCCACGAGTGGA...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000597011.5
CDS-3UTR TCA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGAGTAATGGGCGGACCTaGACCCGCGACGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DPESGPRCILDRTTRSNGSNGRT*TRDEGL
Trigger: CAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACT...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGCACCTAACTTGTAGTTaGCGACCCCGCCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGHLTCS*RPRPPR
Trigger: CCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTG...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGCACCTAACTTGTAGTTaGCGACCCCGCCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: PESGPRCILDRTTRSNGRHLTCS*RPRPPR
Trigger: CCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTG...CCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATAGGGCCCGCAGCAACTaGTTCATGGTGATCGTGCGC +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDRARSN*FMVIVR
Trigger: GCGCACGATCACCATGAAGCAGTTGCTGCGGGCCCT...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGAGACCTGGCAAGCGGTaGCCGAGCCAAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: PESGPRCILDRTTRSNGRRPGKR*PSQRLP
Trigger: GGGAAGTCTTTGGCTCGGGCACCGCTTGCCAGGTCT...CCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGTTGTACAGGATTCGGTaGACTGGGCAGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKLYRIR*TGQTWQ
Trigger: TTGCCAGGTCTGCCCAGTGCACCGAATCCTGTACAA...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGTGCAGCGTGAGGTTCTaGAAGGGCTGGATTCGGGGC +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGCSVRF*KGWIRG
Trigger: GCCCCGAATCCAGCCCTTCCAGAACCTCACGCTGCA...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCAAGAGGCGCACCTGCTaGTCTTTGCCTTTGAACGCC +
Preference number: 4 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSKRRTC*SLPLNA
Trigger: GGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTT...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGAAGAGGCGCACCTGCTaGTCTTTGCCTTTGAACGCC +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLEKRRTC*SLPLNA
Trigger: GGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTT...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGAAGAGGCGCACCTGCTaGTCTTTGCCTTTGAACGCC +
Preference number: 4 (lower is better)
Translates to: LTARQGVMGGPEPATRGWKRRTC*SLPLNA
Trigger: GGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTT...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATGCCGCACATAGAGGCTaGTGCCGGCGGCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: ATEQHRKPTLQGLNKKGHAAHRG*CRRHRG
Trigger: TCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGC...ATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp CAGGAAGGGGTTTCCAAAGCTGAAGACATATCCAGGGCTCCGGGAGCTCCCAGGACCTCGGTGAGCTGGTaGTCGGGCCCATACAGCCAG +
Preference number: 4 (lower is better)
Translates to: QEGVSKAEDISRAPGAPRTSVSW*SGPYSQ
Trigger: CTGGCTGTATGGGCCCGACCACCAGCTCACCGAGGT...CCTGGGAGCTCCCGGAGCCCTGGATATGTCTTCAGCTTTGGAAACCCCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR CCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCAGGATTCGGTGCACTaGGCAGACCTGGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDQDSVH*ADLASG
Trigger: ACCGCTTGCCAGGTCTGCCCAGTGCACCGAATCCTG...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGCAGGCCCATTTTCCATaGTGGGAATGTGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKQAHFP*WECGGS
Trigger: GGAACCTCCACATTCCCACCATGGAAAATGGGCCTG...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGGGGAACATCCACTCGTaGGCTCTGATTCCGTACTGG +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLEGNIHS*ALIPYW
Trigger: CCAGTACGGAATCAGAGCCCACGAGTGGATGTTCCC...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000597011.5
CDS-3UTR CCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATACGGGTCGGTGGATCTaGAGCACAGCCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDTGRWI*STACSF
Trigger: GAAGCTGCAGGCTGTGCTCCAGATCCACCGACCCGT...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGACGGGTCGGTGGATCTaGAGCACAGCCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGTGRWI*STACSF
Trigger: GAAGCTGCAGGCTGTGCTCCAGATCCACCGACCCGT...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGAGTGTCGCAACCACATaGGGGCGCCAGAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: PESGPRCILDRTTRSNGRSVATT*GRQRPR
Trigger: TCTGGGTCTCTGGCGCCCCCATGTGGTTGCGACACT...CCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATAGTGTCGCAACCACATaGGGGCGCCAGAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDSVATT*GRQRPR
Trigger: TCTGGGTCTCTGGCGCCCCCATGTGGTTGCGACACT...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATAGGGCTCGTTCCCAATaGGCACAGGCCGCACATAGA +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDRARSQ*AQAAHR
Trigger: TCTATGTGCGGCCTGTGCTCATTGGGAACGAGCCCT...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCGCGCGTGGGCTGGCTaGCACCCAGCGAGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: QHRKPTLQGLNKKGHYLFRAWAG*HPARAR
Trigger: ACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCG...GAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp GCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTGGTTCCCACCTCGGTaGGCTGGTGGTCGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: ATEQHRKPTLQGLNKKGHWFPPR*AGGRAH
Trigger: ATGGGCCCGACCACCAGCTCACCGAGGTGGGAACCA...ATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGGCAACTGCTTCATGGTaGTCGTGCGCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: QGVSLTARQGVMGGPEPAATASW*SCAPPP
Trigger: GGGTGGTGGAGCGCACGATCACCATGAAGCAGTTGC...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGTATTGCACTTCAGGTaGGTCATTGGTAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LTARQGVMGGPEPATRGWVLHFR*VIGREA
Trigger: CGCCTCCCTACCAATGACTCACCTGAAGTGCAATAC...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAATCCACTCGTGGGCTCTaGTTCCGTACAGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: RGQGVSLTARQGVMGGPESTRGL*FRTGHP
Trigger: TGGGTGCCCTGTACGGAATCAGAGCCCACGAGTGGA...TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593515.5
CDS-3UTR GCA 90 bp AAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCCGGAAGAGGCGCACCTaGTGGTCTTTGCCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: KMPGSALTALGVSQPHGGRKRRT*WSLPLN
Trigger: GTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCG...GCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGTTGAGTGCCTCCTGTTaGACTAACACGGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMLSASC*TNTVGP
Trigger: TGGGCCCACCGTGTTAGTGCAACAGGAGGCACTCAA...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CAGGAAGGGGTTTCCAAAGCTGAAGACATATCCAGGGCTCCGGGAGCTCCCAGGAGGGCCCGCAGCAACTaGTTCATGGTGATCGTGCGC +
Preference number: 4 (lower is better)
Translates to: QEGVSKAEDISRAPGAPRRARSN*FMVIVR
Trigger: GCGCACGATCACCATGAAGCAGTTGCTGCGGGCCCT...CCTGGGAGCTCCCGGAGCCCTGGATATGTCTTCAGCTTTGGAAACCCCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR GCA 90 bp GGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGATCTGGAGCACAGCCTaGAGCTTCACACCGGGAACA +
Preference number: 4 (lower is better)
Translates to: GQDAWVGPYGFGSVATTWIWSTA*SFTPGT
Trigger: TGTTCCCGGTGTGAAGCTGCAGGCTGTGCTCCAGAT...CCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGGGCCTGGGGAGCCACTaGAGTCCTCACTGCATGAGG +
Preference number: 4 (lower is better)
Translates to: DPESGPRCILDRTTRSNGGLGSH*SPHCMR
Trigger: CCTCATGCAGTGAGGACTGCAGTGGCTCCCCAGGCC...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR CCA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGAGGTTCTGGAAGGGCTaGATTCGGGGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DPESGPRCILDRTTRSNGRFWKG*IRGWPQ
Trigger: CTGGGGCCAGCCCCGAATCCAGCCCTTCCAGAACCT...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp ATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGAGGCTGGAGGAGGCTaGGTGCAGCGTGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: IRNRGQGVSLTARQGVMGEAGGG*VQREVL
Trigger: CAGAACCTCACGCTGCACCCAGCCTCCTCCAGCCTC...GCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTTGCACTAACACGGTaGGCCCATAATTCCCACCTA +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKVALTR*AHNSHL
Trigger: TAGGTGGGAATTATGGGCCCACCGTGTTAGTGCAAC...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCTGCACTGGGCAGACCTaGCAAGCGGTGCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: KNQRQHQGSGLRTERSGICTGQT*QAVPEP
Trigger: TGGCTCGGGCACCGCTTGCCAGGTCTGCCCAGTGCA...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGCAGGATTCGGTGCACTaGGCAGACCTGGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: QGVSLTARQGVMGGPEPAQDSVH*ADLASG
Trigger: ACCGCTTGCCAGGTCTGCCCAGTGCACCGAATCCTG...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCAGAGACGCCCATTTTCCATGGTaGGAATGTGGAGGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GSALTALGVSQPHGGARDAHFPW*ECGGSC
Trigger: ACAGGAACCTCCACATTCCCACCATGGAAAATGGGC...GTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGTCCTTCAGCTCCTTCTaGAAGCGGAGGATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLESFSSF*KRRISS
Trigger: TGAGCTGATCCTCCGCTTCCAGAAGGAGCTGAAGGA...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAATCCTTCAGCTCCTTCTaGAAGCGGAGGATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQSFSSF*KRRISS
Trigger: TGAGCTGATCCTCCGCTTCCAGAAGGAGCTGAAGGA...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAAACGGGTCGGTGGATCTaGAGCACAGCCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RGQGVSLTARQGVMGGPETGRWI*STACSF
Trigger: GAAGCTGCAGGCTGTGCTCCAGATCCACCGACCCGT...TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCCCAGACGCCGCCCGCTaGCCTTTTATTTCGTATTGC +
Preference number: 4 (lower is better)
Translates to: KMPGSALTALGVSQPHGGPDAAR*PFISYC
Trigger: GCAATACGAAATAAAAGGCCAGCGGGCGGCGTCTGG...GCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGAAGATGGACGTGAATaGGCGTGGTCACTTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LTARQGVMGGPEPATRGWEDGRE*AWSLVA
Trigger: AGCGACAAGTGACCACGCCCATTCACGTCCATCTTC...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR CCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGAACATCCACTCGTaGGCTCTGATTCCGTACAGG +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMGNIHS*ALIPYR
Trigger: CCTGTACGGAATCAGAGCCCACGAGTGGATGTTCCC...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593515.5
CDS-3UTR TCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATGCAGGTCTGCAGCCTTaGAACTGGAGGAGGCATATC +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDAGLQP*NWRRHI
Trigger: GATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGC...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGCTGGTCTTTGCCTTTaGACGCCTTCATGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMAGLCL*TPSCPQ
Trigger: TTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGC...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAAAGGGCTCGTTCCCAATaGGCACAGGCCGCACATAGA +
Preference number: 4 (lower is better)
Translates to: RGQGVSLTARQGVMGGPERARSQ*AQAAHR
Trigger: TCTATGTGCGGCCTGTGCTCATTGGGAACGAGCCCT...TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGCCACTGGGCAGAGAATaGCGAACAGGAGCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: AARWPFISYCTSGESLVGPLGRE*RTGARA
Trigger: CGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGG...CCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp ACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCCACCCAGGCCCGGATaGAGGCTGGGTCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TEQHRKPTLQGLNKKGHYPPRPG*RLGRPG
Trigger: TCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGG...ATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp CCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGTCCACTCGTGGGCTCTaGTTCCGTACTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: PESGPRCILDRTTRSNGRSTRGL*FRTGSP
Trigger: AGGAGATCCAGTACGGAATCAGAGCCCACGAGTGGA...CCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000597011.5
CDS-3UTR TCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGTATTGCACTTCAGGTaGGTCATTGGTAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMVLHFR*VIGREA
Trigger: CGCCTCCCTACCAATGACTCACCTGAAGTGCAATAC...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGTGGGTGAGTTGGCACTaGTTCTGGAAGATGGACGTG +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMWVSWH*FWKMDV
Trigger: CACGTCCATCTTCCAGAATCAGTGCCAACTCACCCA...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR TCA 90 bp CCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCCTCTCTGGTGACCTTTaGCCTCACAAGGCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PGVWPENGEIRNRGQGVSLSGDL*PHKASF
Trigger: GAAAGAGGCCTTGTGAGGTCAAAGGTCACCAGAGAG...GGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR TCA 90 bp GCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGGCAGTCCTCACTGCATaGGGCTCAGGCGGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AARWPFISYCTSGESLVGAVLTA*GSGGSS
Trigger: GGAGGACCCGCCTGAGCCTCATGCAGTGAGGACTGC...CCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR TCA 90 bp CCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGGCTCCCAGGAAAGGGTaGTTTAGCCCCAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PESGPRCILDRTTRSNGRAPRKG*FSPKGF
Trigger: AAACCCCTTGGGGCTAAATCACCCTTTCCTGGGAGC...CCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593515.5
CDS-3UTR TCA 90 bp GGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGAGGGGTTTCCAAAGCTaGAGACATATCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GQDAWVGPYGFGSVATTWRGFQS*RHIQGS
Trigger: GGAGCCCTGGATATGTCTTCAGCTTTGGAAACCCCT...CCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593515.5
CDS-3UTR GCA 90 bp CGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGTGTGTCATTTCCAGCTaGAGGTCTGCAGCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: RQHQGSGLRTERSGIGAKCVISS*RSAALK
Trigger: TTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACA...CTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp ATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCAGACCTGGCAAGCGGTaGCCGAGCCAAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: IRNRGQGVSLTARQGVMGRPGKR*PSQRLP
Trigger: GGGAAGTCTTTGGCTCGGGCACCGCTTGCCAGGTCT...GCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGTTGTACAGGATTCGGTaGACTGGGCAGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMLYRIR*TGQTWQ
Trigger: TTGCCAGGTCTGCCCAGTGCACCGAATCCTGTACAA...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCCCATTAAAGCCTCGTaGTCCTTTCCAAAGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDPIKAS*SFPKGA
Trigger: GGCGCCCTTTGGAAAGGAGCACGAGGCTTTAATGGG...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597011.5
CDS-3UTR CCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCAGGTTCTGGAAGGGCTaGATTCGGGGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KNQRQHQGSGLRTERSGIRFWKG*IRGWPQ
Trigger: CTGGGGCCAGCCCCGAATCCAGCCCTTCCAGAACCT...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp ATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCTGCAGCGTGAGGTTCTaGAAGGGCTGGATTCGGGGC +
Preference number: 4 (lower is better)
Translates to: IRNRGQGVSLTARQGVMGCSVRF*KGWIRG
Trigger: GCCCCGAATCCAGCCCTTCCAGAACCTCACGCTGCA...GCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTGCAGGCACAGGCGCATaGCTGAGCGCAGCATCCGGT +
Preference number: 4 (lower is better)
Translates to: PQSSTESPLSRASIRKAIAGTGA*LSAASG
Trigger: ACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGC...AATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp GACGCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGCCGCACATAGAGGCTaGTGCCGGCGGCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: DAARWPFISYCTSGESLVAAHRG*CRRHRG
Trigger: TCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGC...TACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTAAGCGCGCGCGTGGGCTaGCTGACACCCAGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: KPTLQGLNKKGHYLFLVLSARVG*LTPSEG
Trigger: GCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCT...TAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp CCCAAGGGGTTTTCCAGGCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCGAAGTAGGCACCCACTaGGCAGAGAATGACGAACAG +
Preference number: 4 (lower is better)
Translates to: PKGFSRPQSSTESPLSRAEVGTH*AENDEQ
Trigger: CTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTC...GGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGCCTGGAAAACCCCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR CCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGTTGCACTAACACGGTaGGCCCATAATTCCCACCTA +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQVALTR*AHNSHL
Trigger: TAGGTGGGAATTATGGGCCCACCGTGTTAGTGCAAC...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGGTTGCACTAACACGGTaGGCCCATAATTCCCACCTA +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLEVALTR*AHNSHL
Trigger: TAGGTGGGAATTATGGGCCCACCGTGTTAGTGCAAC...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGCAGGCCCATTTTCCATaGTGGGAATGTGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMQAHFP*WECGGS
Trigger: GGAACCTCCACATTCCCACCATGGAAAATGGGCCTG...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCGCTCTGATTCCGTACTaGATCTCCTTCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSALIPY*ISFSSF
Trigger: GAAGGAGCTGAAGGAGATCCAGTACGGAATCAGAGC...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000597011.5
CDS-3UTR CCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGGGAACATCCACTCGTaGGCTCTGATTCCGTACTGG +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGGNIHS*ALIPYW
Trigger: CCAGTACGGAATCAGAGCCCACGAGTGGATGTTCCC...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000597011.5
CDS-3UTR CCA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGGATGCTACGGGTCGGTaGATCTGGAGCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: DPESGPRCILDRTTRSNGDATGR*IWSTAC
Trigger: GCAGGCTGTGCTCCAGATCCACCGACCCGTAGCATC...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGCCAGACGCCGCCCGCTaGCCTTTTATTTCGTATTGC +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGPDAAR*PFISYC
Trigger: GCAATACGAAATAAAAGGCCAGCGGGCGGCGTCTGG...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGGCAGCACCAGGGGTCTaGCCTGAGAACGGAGAGATC +
Preference number: 4 (lower is better)
Translates to: DPESGPRCILDRTTRSNGAAPGV*PENGEI
Trigger: GATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGC...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp AGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACGAGCGGCTGCGGCCATaGTCCGTGCGGCGCGTAACT +
Preference number: 4 (lower is better)
Translates to: SPLSRASIRKAIICSWYYERLRP*SVRRVT
Trigger: AGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTC...GTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp AGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCGAGCGGCTGCGGCCATaGTCCGTGCGGCGCGTAACT +
Preference number: 4 (lower is better)
Translates to: STESPLSRASIRKAIICSERLRP*SVRRVT
Trigger: AGTTACGCGCCGCACGGATCATGGCCGCAGCCGCTC...GGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCTGGTCTTTGCCTTTaGACGCCTTCATGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGAGLCL*TPSCPQ
Trigger: TTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGC...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GACGCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGCATCCGGTCCATGTTaGGCCAGGGGCGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: DAARWPFISYCTSGESLVASGPC*ARGGRG
Trigger: GCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGC...TACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGGCACAGGCGCATGGCTaGGCGCAGCATCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: ARWPFISYCTSGESLVGRAQAHG*AQHPVH
Trigger: ATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGC...CCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCCCTTGTCCACTTCGATaGGCCGGCGGATGCACTCCA +
Preference number: 4 (lower is better)
Translates to: KNQRQHQGSGLRTERSGIPCPLR*AGGCTP
Trigger: TGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGG...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCCCACTGGGCAGAGAATaGCGAACAGGAGCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: QSSTESPLSRASIRKAIIPLGRE*RTGARA
Trigger: CGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGG...GATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCCACCCAGGCCCGGATaGAGGCTGGGTCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVPPRPG*RLGRPG
Trigger: TCCTGGCCGACCCAGCCTTCATCCGGGCCTGGGTGG...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGAACTCACCCCAGGTCTaGGCCATGTCCAGTAGACTC +
Preference number: 4 (lower is better)
Translates to: QGVSLTARQGVMGGPEPANSPQV*AMSSRL
Trigger: GAGTCTACTGGACATGGCTCAGACCTGGGGTGAGTT...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAAAACTCACCCCAGGTCTaGGCCATGTCCAGTAGACTC +
Preference number: 4 (lower is better)
Translates to: RGQGVSLTARQGVMGGPENSPQV*AMSSRL
Trigger: GAGTCTACTGGACATGGCTCAGACCTGGGGTGAGTT...TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGAGGCGAGTGCTGGCGTaGCGAGATGCTACGGGTCGG +
Preference number: 4 (lower is better)
Translates to: ARWPFISYCTSGESLVGRRRVLA*RDATGR
Trigger: CCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCT...CCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGGTATTGCACTTCAGGTaGGTCATTGGTAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: PESGPRCILDRTTRSNGRVLHFR*VIGREA
Trigger: CGCCTCCCTACCAATGACTCACCTGAAGTGCAATAC...CCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GACGCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAAGTAATGGGCGGACCTaGACCCGCGACGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DAARWPFISYCTSGESLVSNGRT*TRDEGL
Trigger: CAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACT...TACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp AGGGGTTTTCCAGGCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAAGCTCCCAGGAAAGGGTaGTTTAGCCCCAAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: RGFPGHRAAQKAHSPGPQAPRKG*FSPKGF
Trigger: AAACCCCTTGGGGCTAAATCACCCTTTCCTGGGAGC...TTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGCCTGGAAAACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR GCA 90 bp CTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGAGCTGCCCCAGAGCGGCTaGGGCCATGATCCGTGCGGC +
Preference number: 4 (lower is better)
Translates to: LQGLNKKGHYLFLVLLKELPQSG*GHDPCG
Trigger: GCCGCACGGATCATGGCCGCAGCCGCTCTGGGGCAG...CTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGAGAGAGAAGCTTTCGTaGCCAGATCTGCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QGVSLTARQGVMGGPEPAREKLS*PDLPQS
Trigger: GCTCTGGGGCAGATCTGGGCACGAAAGCTTCTCTCT...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316273.11
CDS-3UTR GCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAATGTGTCATTTCCAGCTaGAGGTCTGCAGCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQCVISS*RSAALK
Trigger: TTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACA...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGCGGAAGAGGCGCACCTaGTGGTCTTTGCCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: QGVSLTARQGVMGGPEPARKRRT*WSLPLN
Trigger: GTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCG...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACGGAAGAGGCGCACCTaGTGGTCTTTGCCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: RGQGVSLTARQGVMGGPERKRRT*WSLPLN
Trigger: GTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCG...TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGAGGCTGGCGCACATAGAGGCTGGTaGCGGCGGCATCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: GLNKKGHYLFLVLLKEAGAHRGW*RRHRGP
Trigger: GGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGC...GCCAGCCTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp AGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACGCACATAGAGGCTGGTaGCGGCGGCATCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: SPLSRASIRKAIICSWYYAHRGW*RRHRGP
Trigger: GGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGC...GTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCAGGGCCCGCAGCAACTaGTTCATGGTGATCGTGCGC +
Preference number: 4 (lower is better)
Translates to: KNQRQHQGSGLRTERSGIRARSN*FMVIVR
Trigger: GCGCACGATCACCATGAAGCAGTTGCTGCGGGCCCT...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGTTGTACAGGATTCGGTaGACTGGGCAGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGLYRIR*TGQTWQ
Trigger: TTGCCAGGTCTGCCCAGTGCACCGAATCCTGTACAA...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGGGCTGGATTCGGGGCTaGCCCCAGCCCTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: AARWPFISYCTSGESLVGGWIRG*PQPLSF
Trigger: GAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCC...CCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGAAGAGGCGCACCTGCTaGTCTTTGCCTTTGAACGCC +
Preference number: 4 (lower is better)
Translates to: QGVSLTARQGVMGGPEPAKRRTC*SLPLNA
Trigger: GGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTT...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGAAGTAGGCACCCACTaGGCAGAGAATGACGAACAG +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGEVGTH*AENDEQ
Trigger: CTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTC...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATGAAGTAGGCACCCACTaGGCAGAGAATGACGAACAG +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDEVGTH*AENDEQ
Trigger: CTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTC...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTACCTCGGTGAGCTGGTaGTCGGGCCCATACAGCCAG +
Preference number: 4 (lower is better)
Translates to: PQSSTESPLSRASIRKAITSVSW*SGPYSQ
Trigger: CTGGCTGTATGGGCCCGACCACCAGCTCACCGAGGT...AATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGTCCATGGTGGGAATGTaGAGGTTCCTGTCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: LTARQGVMGGPEPATRGWSMVGM*RFLSLY
Trigger: GTACAAAGACAGGAACCTCCACATTCCCACCATGGA...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCTCCATGGTGGGAATGTaGAGGTTCCTGTCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSSMVGM*RFLSLY
Trigger: GTACAAAGACAGGAACCTCCACATTCCCACCATGGA...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGCCCATTTTCCATGGTaGGAATGTGGAGGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMAHFPW*ECGGSC
Trigger: ACAGGAACCTCCACATTCCCACCATGGAAAATGGGC...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATTCCTTCAGCTCCTTCTaGAAGCGGAGGATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDSFSSF*KRRISS
Trigger: TGAGCTGATCCTCCGCTTCCAGAAGGAGCTGAAGGA...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGTCCTTCAGCTCCTTCTaGAAGCGGAGGATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGSFSSF*KRRISS
Trigger: TGAGCTGATCCTCCGCTTCCAGAAGGAGCTGAAGGA...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp ATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCCGGCCCTTACGGCTTTaGGAGTGTCGCAACCACATG +
Preference number: 4 (lower is better)
Translates to: IRNRGQGVSLTARQGVMGRPLRL*ECRNHM
Trigger: CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCG...GCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATCTGTTCCTGGTACTaGATCTCCTTCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WGPRCLGRPLRLWECRNHICSWY*ISFSSF
Trigger: GAAGGAGCTGAAGGAGATCCAGTACCAGGAACAGAT...GTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593515.5
CDS-3UTR CCA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGGCCATTATCTGTTCCTaGTACTGGATCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GREASAGVTRCYGSVDLEAIICS*YWISFS
Trigger: GCTGAAGGAGATCCAGTACCAGGAACAGATAATGGC...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593515.5
CDS-3UTR TCA 90 bp CGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAAGCTGGTCTTTGCCTTTaGACGCCTTCATGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: RGQGVSLTARQGVMGGPEAGLCL*TPSCPQ
Trigger: TTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGC...TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGCATCCGGTCCATGTTaGGCCAGGGGCGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: HRKPTLQGLNKKGHYLFLASGPC*ARGGRG
Trigger: GCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGC...CAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp GCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGCCTTGTCCACTTCGATaGGCCGGCGGATGCACTCCA +
Preference number: 4 (lower is better)
Translates to: AARWPFISYCTSGESLVGPCPLR*AGGCTP
Trigger: TGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGG...CCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCAGGGCTCGTTCCCAATaGGCACAGGCCGCACATAGA +
Preference number: 4 (lower is better)
Translates to: KNQRQHQGSGLRTERSGIRARSQ*AQAAHR
Trigger: TCTATGTGCGGCCTGTGCTCATTGGGAACGAGCCCT...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp ACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCCACTGGGCAGAGAATaGCGAACAGGAGCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: TEQHRKPTLQGLNKKGHYPLGRE*RTGARA
Trigger: CGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGG...ATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp GGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGAGGCTGGCTGGTTCCCACCTCGGTaGGCTGGTGGTCGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GLNKKGHYLFLVLLKEAGWFPPR*AGGRAH
Trigger: ATGGGCCCGACCACCAGCTCACCGAGGTGGGAACCA...GCCAGCCTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp CCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCTGTGTCATTTCCAGCTaGAGGTCTGCAGCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: PGVWPENGEIRNRGQGVSCVISS*RSAALK
Trigger: TTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACA...GGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGGCACATAGAGGCTGGTaGCGGCGGCATCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: PFISYCTSGESLVGRRVLAHRGW*RRHRGP
Trigger: GGGTCCCCGATGCCGCCGGCACCAGCCTCTATGTGC...CAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGTCCACCATCAGCATGTaGTCGGTAAATGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GQDAWVGPYGFGSVATTWSTISM*SVNVFP
Trigger: TGGGAAGACATTTACCGACCACATGCTGATGGTGGA...CCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GACGCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGAGGCTGGAGGAGGCTaGGTGCAGCGTGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DAARWPFISYCTSGESLVEAGGG*VQREVL
Trigger: CAGAACCTCACGCTGCACCCAGCCTCCTCCAGCCTC...TACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGGAGGCTGGAGGAGGCTaGGTGCAGCGTGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: EQHRKPTLQGLNKKGHYLEAGGG*VQREVL
Trigger: CAGAACCTCACGCTGCACCCAGCCTCCTCCAGCCTC...CAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598162.5
CDS-3UTR CCA 90 bp GAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACGCAGGCACAGGCGCATaGCTGAGCGCAGCATCCGGT +
Preference number: 4 (lower is better)
Translates to: ESPLSRASIRKAIICSWYAGTGA*LSAASG
Trigger: ACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGC...GTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp AGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTAGCCGCACATAGAGGCTaGTGCCGGCGGCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: RKPTLQGLNKKGHYLFLVAAHRG*CRRHRG
Trigger: TCCCCGATGCCGCCGGCACCAGCCTCTATGTGCGGC...TACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp AGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCCCCACCTCGGTGAGCTaGTGGTCGGGCCCATACAGC +
Preference number: 4 (lower is better)
Translates to: STESPLSRASIRKAIICSPTSVS*WSGPYS
Trigger: GCTGTATGGGCCCGACCACCAGCTCACCGAGGTGGG...GGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp TTTTCCAGGCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGACAGGATTCGGTGCACTaGGCAGACCTGGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: FSRPQSSTESPLSRASIRQDSVH*ADLASG
Trigger: ACCGCTTGCCAGGTCTGCCCAGTGCACCGAATCCTG...TCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGCCTGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR CCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATGCCCATTTTCCATGGTaGGAATGTGGAGGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDAHFPW*ECGGSC
Trigger: ACAGGAACCTCCACATTCCCACCATGGAAAATGGGC...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGGGGGGCCAAGATGCCTaGGTCGGCCCTTACGGCTTT +
Preference number: 4 (lower is better)
Translates to: ARWPFISYCTSGESLVGRGGQDA*VGPYGF
Trigger: AAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCC...CCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
3UTR CAA 72 bp AACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCTaGACCGCACGACAAGGAGTAATGGGCGGACCTGAA +
Preference number: 4 (lower is better)
Translates to: NGEIRNRGQGVS*TARQGVMGGPE
Trigger: TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATCTCTCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGGGGCCAGGCTTCTTATaGGGCTTCTGTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: DPESGPRCILDRTTRSNGGPGFL*GFCVIS
Trigger: GGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCC...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGGCTGGTCTTTGCCTTTaGACGCCTTCATGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: DPESGPRCILDRTTRSNGAGLCL*TPSCPQ
Trigger: TTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGC...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGGCATCCGGTCCATGTTaGGCCAGGGGCGGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVASGPC*ARGGRG
Trigger: GCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGC...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp AGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTAGCACAGGCGCATGGCTaGGCGCAGCATCCGGTCCAT +
Preference number: 4 (lower is better)
Translates to: RKPTLQGLNKKGHYLFLVAQAHG*AQHPVH
Trigger: ATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGC...TACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGTGGTTCCCACCTCGGTaGGCTGGTGGTCGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVWFPPR*AGGRAH
Trigger: ATGGGCCCGACCACCAGCTCACCGAGGTGGGAACCA...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCTCCACTCGTGGGCTCTaGTTCCGTACTGGATCTCCT +
Preference number: 4 (lower is better)
Translates to: KNQRQHQGSGLRTERSGISTRGL*FRTGSP
Trigger: AGGAGATCCAGTACGGAATCAGAGCCCACGAGTGGA...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000597011.5
CDS-3UTR TCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGAACCCATTTTGGCAGTaGCTCCAATTCCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QGVSLTARQGVMGGPEPANPFWQ*LQFPSA
Trigger: GGCTGAAGGGAATTGGAGTCACTGCCAAAATGGGTT...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR TCA 90 bp AGGCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCAGGGGTTTCCAAAGCTaGAGACATATCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RPQSSTESPLSRASIRKARGFQS*RHIQGS
Trigger: GGAGCCCTGGATATGTCTTCAGCTTTGGAAACCCCT...GGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR TCA 90 bp AAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTATGGGAGGCCAACCTCTaGGATGGCCAGAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KPTLQGLNKKGHYLFLVLWEANL*DGQRAG
Trigger: GCCAGCCCTCTGGCCATCTCAGAGGTTGGCCTCCCA...TAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR GCA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATTGTGTCATTTCCAGCTaGAGGTCTGCAGCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: VIGREASAGVTRCYGSVDCVISS*RSAALK
Trigger: TTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACA...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GACGCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTACACCTAACTTGTAGTTaGCGACCCCGCCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: DAARWPFISYCTSGESLVHLTCS*RPRPPR
Trigger: CCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTG...TACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCTTGAGTGCCTCCTGTTaGACTAACACGGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: KNQRQHQGSGLRTERSGILSASC*TNTVGP
Trigger: TGGGCCCACCGTGTTAGTGCAACAGGAGGCACTCAA...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGGGCTGGATTCGGGGCTaGCCCCAGCCCTTGTCATTC +
Preference number: 4 (lower is better)
Translates to: PTLQGLNKKGHYLFLVLLGWIRG*PQPLSF
Trigger: GAATGACAAGGGCTGGGGCCAGCCCCGAATCCAGCC...CAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598162.5
CDS-3UTR CCA 90 bp CCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAGGTTCTGGAAGGGCTaGATTCGGGGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PTLQGLNKKGHYLFLVLLRFWKG*IRGWPQ
Trigger: CTGGGGCCAGCCCCGAATCCAGCCCTTCCAGAACCT...CAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598162.5
CDS-3UTR CCA 90 bp CCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGTGCACTGGGCAGACCTaGCAAGCGGTGCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: PFISYCTSGESLVGRRVLCTGQT*QAVPEP
Trigger: TGGCTCGGGCACCGCTTGCCAGGTCTGCCCAGTGCA...CAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGAGTGCACTGGGCAGACCTaGCAAGCGGTGCCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: LQGLNKKGHYLFLVLLKECTGQT*QAVPEP
Trigger: TGGCTCGGGCACCGCTTGCCAGGTCTGCCCAGTGCA...CTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGTCCATGGTGGGAATGTaGAGGTTCCTGTCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGSMVGM*RFLSLY
Trigger: GTACAAAGACAGGAACCTCCACATTCCCACCATGGA...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGGCCCATTTTCCATGGTaGGAATGTGGAGGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: QGVSLTARQGVMGGPEPAAHFPW*ECGGSC
Trigger: ACAGGAACCTCCACATTCCCACCATGGAAAATGGGC...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCAGGCCCATTTTCCATaGTGGGAATGTGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: DPESGPRCILDRTTRSNGQAHFP*WECGGS
Trigger: GGAACCTCCACATTCCCACCATGGAAAATGGGCCTG...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGGCTCTGATTCCGTACTaGATCTCCTTCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QGVSLTARQGVMGGPEPAALIPY*ISFSSF
Trigger: GAAGGAGCTGAAGGAGATCCAGTACGGAATCAGAGC...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000597011.5
CDS-3UTR CCA 90 bp GCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGGATGCTACGGGTCGGTaGATCTGGAGCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ARWPFISYCTSGESLVGRDATGR*IWSTAC
Trigger: GCAGGCTGTGCTCCAGATCCACCGACCCGTAGCATC...CCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GACGCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAAGTGTCGCAACCACATaGGGGCGCCAGAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: DAARWPFISYCTSGESLVSVATT*GRQRPR
Trigger: TCTGGGTCTCTGGCGCCCCCATGTGGTTGCGACACT...TACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp AGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACCCTTGTCCACTTCGATaGGCCGGCGGATGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SPLSRASIRKAIICSWYYPCPLR*AGGCTP
Trigger: TGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGG...GTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp GCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAACTCACCCCAGGTCTaGGCCATGTCCAGTAGACTC +
Preference number: 4 (lower is better)
Translates to: AARWPFISYCTSGESLVGNSPQV*AMSSRL
Trigger: GAGTCTACTGGACATGGCTCAGACCTGGGGTGAGTT...CCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp CAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCGCAACTGCTTCATGGTaGTCGTGCGCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: QHRKPTLQGLNKKGHYLFATASW*SCAPPP
Trigger: GGGTGGTGGAGCGCACGATCACCATGAAGCAGTTGC...GAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp ACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATGCAACTGCTTCATGGTaGTCGTGCGCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: TEQHRKPTLQGLNKKGHYATASW*SCAPPP
Trigger: GGGTGGTGGAGCGCACGATCACCATGAAGCAGTTGC...ATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCTCTGGAAGATGGACGTaGATGGGCGTGGTCACTTGT +
Preference number: 4 (lower is better)
Translates to: KNQRQHQGSGLRTERSGISGRWT*MGVVTC
Trigger: ACAAGTGACCACGCCCATTCACGTCCATCTTCCAGA...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR TCA 90 bp GGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGTTTCGTGCCCAGATCTaGAATACAAACCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: GQDAWVGPYGFGSVATTWFRAQI*NTNPFW
Trigger: CCAAAATGGGTTTGTATTTCAGATCTGGGCACGAAA...CCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR GCA 90 bp GCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGTGGCGACATCTAGACTaGTCAGCCTTGCAGCCATGC +
Preference number: 4 (lower is better)
Translates to: AARWPFISYCTSGESLVGWRHLD*SALQPC
Trigger: GCATGGCTGCAAGGCTGAGCAGTCTAGATGTCGCCA...CCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR GCA 90 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACAGAGAGAAGCTTTCGTaGCCAGATCTGAAATACAAA +
Preference number: 4 (lower is better)
Translates to: WGPRCLGRPLRLWECRNHREKLS*PDLKYK
Trigger: TTTGTATTTCAGATCTGGGCACGAAAGCTTCTCTCT...GTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR GCA 90 bp CGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAAAGAGAGAAGCTTTCGTaGCCAGATCCCATTAAAGCC +
Preference number: 4 (lower is better)
Translates to: RGQGVSLTARQGVMGGPEREKLS*PDPIKA
Trigger: GGCTTTAATGGGATCTGGGCACGAAAGCTTCTCTCT...TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597011.5
CDS-3UTR CCA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGTCCACCATCAGCATGTaGTCGGTAAATGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: QGVSLTARQGVMGGPEPASTISM*SVNVFP
Trigger: TGGGAAGACATTTACCGACCACATGCTGATGGTGGA...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGCAGCGTGAGGTTCTaGAAGGGCTGGATTCGGGGC +
Preference number: 4 (lower is better)
Translates to: SPLSRASIRKAIICSWYYCSVRF*KGWIRG
Trigger: GCCCCGAATCCAGCCCTTCCAGAACCTCACGCTGCA...GTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598162.5
CDS-3UTR CCA 90 bp TTTTCCAGGCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGAGGCGCACCTGCTaGTCTTTGCCTTTGAACGCC +
Preference number: 4 (lower is better)
Translates to: FSRPQSSTESPLSRASIRKRRTC*SLPLNA
Trigger: GGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTT...TCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGCCTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR CCA 90 bp GCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATGAAGTAGGCACCCACTaGGCAGAGAATGACGAACAG +
Preference number: 4 (lower is better)
Translates to: ATEQHRKPTLQGLNKKGHEVGTH*AENDEQ
Trigger: CTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTC...ATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp CCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGCAGGATTCGGTGCACTaGGCAGACCTGGCAAGCGGT +
Preference number: 4 (lower is better)
Translates to: PTLQGLNKKGHYLFLVLLQDSVH*ADLASG
Trigger: ACCGCTTGCCAGGTCTGCCCAGTGCACCGAATCCTG...CAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp GCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTCCTTCAGCTCCTTCTaGAAGCGGAGGATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ATEQHRKPTLQGLNKKGHSFSSF*KRRISS
Trigger: TGAGCTGATCCTCCGCTTCCAGAAGGAGCTGAAGGA...ATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp GCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGGGGGTGATCAGAGCGTaGGTCCCCAGATTGCCTTTG +
Preference number: 4 (lower is better)
Translates to: ARWPFISYCTSGESLVGRGVIRA*VPRLPL
Trigger: CAAAGGCAATCTGGGGACCCACGCTCTGATCACCCC...CCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR CCA 90 bp CCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGAGAGACAGAGTGGCCTaGCCTGGCCTGCCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PFISYCTSGESLVGRRVLRDRVA*PGLPCE
Trigger: CTCACAGGGCAGGCCAGGCCAGGCCACTCTGTCTCT...CAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR TCA 90 bp GCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGGGGCCAGGCTTCTTATaGGGCTTCTGTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: AARWPFISYCTSGESLVGGPGFL*GFCVIS
Trigger: GGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCC...CCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp ACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGAGGGCTCGTTCCCAATaGGCACAGGCCGCACATAGA +
Preference number: 4 (lower is better)
Translates to: TESPLSRASIRKAIICSWRARSQ*AQAAHR
Trigger: TCTATGTGCGGCCTGTGCTCATTGGGAACGAGCCCT...CCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp GAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACAGGGCTCGTTCCCAATaGGCACAGGCCGCACATAGA +
Preference number: 4 (lower is better)
Translates to: ESPLSRASIRKAIICSWYRARSQ*AQAAHR
Trigger: TCTATGTGCGGCCTGTGCTCATTGGGAACGAGCCCT...GTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGGCAACTGCTTCATGGTaGTCGTGCGCTCCACCACCC +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVATASW*SCAPPP
Trigger: GGGTGGTGGAGCGCACGATCACCATGAAGCAGTTGC...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGGTATTGCACTTCAGGTaGGTCATTGGTAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: AARWPFISYCTSGESLVGVLHFR*VIGREA
Trigger: CGCCTCCCTACCAATGACTCACCTGAAGTGCAATAC...CCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGACCAGGGGTCTGGCCTaGGAACGGAGAGATCCGGAA +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVTRGLA*ERRDPE
Trigger: TTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGT...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTGTTCCTGGTACTACTaGAGGAGGCTGGCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: ATEQHRKPTLQGLNKKGHCSWYY*RRLAVS
Trigger: ACTAACAGCCAGCCTCCTTCAGTAGTACCAGGAACA...ATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp GACGCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTATTGAGTGCCTCCTGTTaGACTAACACGGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DAARWPFISYCTSGESLVLSASC*TNTVGP
Trigger: TGGGCCCACCGTGTTAGTGCAACAGGAGGCACTCAA...TACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGAGGGCCCGCAGCAACTaGTTCATGGTGATCGTGCGC +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVRARSN*FMVIVR
Trigger: GCGCACGATCACCATGAAGCAGTTGCTGCGGGCCCT...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp AGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTAAGGGCCCGCAGCAACTaGTTCATGGTGATCGTGCGC +
Preference number: 4 (lower is better)
Translates to: RKPTLQGLNKKGHYLFLVRARSN*FMVIVR
Trigger: GCGCACGATCACCATGAAGCAGTTGCTGCGGGCCCT...TACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGAGACCTGGCAAGCGGTaGCCGAGCCAAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVRPGKR*PSQRLP
Trigger: GGGAAGTCTTTGGCTCGGGCACCGCTTGCCAGGTCT...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGAGGCTAGACCTGGCAAGCGGTaGCCGAGCCAAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: QGLNKKGHYLFLVLLKEARPGKR*PSQRLP
Trigger: GGGAAGTCTTTGGCTCGGGCACCGCTTGCCAGGTCT...AGCCTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCCCTTTTATTTCGTATTaGACTTCAGGTGAGTCATTG +
Preference number: 4 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSPFISY*TSGESL
Trigger: CAATGACTCACCTGAAGTGCAATACGAAATAAAAGG...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAACCTTTTATTTCGTATTaGACTTCAGGTGAGTCATTG +
Preference number: 4 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQPFISY*TSGESL
Trigger: CAATGACTCACCTGAAGTGCAATACGAAATAAAAGG...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp ATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCTCCACCATCAGCATGTaGTCGGTAAATGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: IRNRGQGVSLTARQGVMGSTISM*SVNVFP
Trigger: TGGGAAGACATTTACCGACCACATGCTGATGGTGGA...GCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp AGGCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCTCCATGGTGGGAATGTaGAGGTTCCTGTCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: RPQSSTESPLSRASIRKASMVGM*RFLSLY
Trigger: GTACAAAGACAGGAACCTCCACATTCCCACCATGGA...GGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGCCCATTTTCCATGGTaGGAATGTGGAGGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: KNQRQHQGSGLRTERSGIAHFPW*ECGGSC
Trigger: ACAGGAACCTCCACATTCCCACCATGGAAAATGGGC...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGGGGAACATCCACTCGTaGGCTCTGATTCCGTACTGG +
Preference number: 4 (lower is better)
Translates to: ARWPFISYCTSGESLVGRGNIHS*ALIPYW
Trigger: CCAGTACGGAATCAGAGCCCACGAGTGGATGTTCCC...CCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000597011.5
CDS-3UTR CCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGACGGGTCGGTGGATCTaGAGCACAGCCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVTGRWI*STACSF
Trigger: GAAGCTGCAGGCTGTGCTCCAGATCCACCGACCCGT...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGGATGCTACGGGTCGGTaGATCTGGAGCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVDATGR*IWSTAC
Trigger: GCAGGCTGTGCTCCAGATCCACCGACCCGTAGCATC...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCCAGACGCCGCCCGCTaGCCTTTTATTTCGTATTGC +
Preference number: 4 (lower is better)
Translates to: ARWPFISYCTSGESLVGRPDAAR*PFISYC
Trigger: GCAATACGAAATAAAAGGCCAGCGGGCGGCGTCTGG...CCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTCCCTGCAGCTCACCTaGATCTCCTTCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QSSTESPLSRASIRKAIISLQLT*ISFSSF
Trigger: GAAGGAGCTGAAGGAGATCCAGGTGAGCTGCAGGGA...GATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp GCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGGGGCCAGGCTTCTTATaGGGCTTCTGTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: ARWPFISYCTSGESLVGRGPGFL*GFCVIS
Trigger: GGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCC...CCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp GAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACAACTCACCCCAGGTCTaGGCCATGTCCAGTAGACTC +
Preference number: 4 (lower is better)
Translates to: ESPLSRASIRKAIICSWYNSPQV*AMSSRL
Trigger: GAGTCTACTGGACATGGCTCAGACCTGGGGTGAGTT...GTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp CACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGAACTCACCCCAGGTCTaGGCCATGTCCAGTAGACTC +
Preference number: 4 (lower is better)
Translates to: HRKPTLQGLNKKGHYLFLNSPQV*AMSSRL
Trigger: GAGTCTACTGGACATGGCTCAGACCTGGGGTGAGTT...CAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp GCCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTGGCTAAGGTCTCAGTaGTTCATGGAAAGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: ATEQHRKPTLQGLNKKGHWLRSQ*FMERAF
Trigger: AAAGGCCCTTTCCATGAATCACTGAGACCTTAGCCA...ATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR GCA 90 bp AGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTCGGAAGAGGCGCACCTaGTGGTCTTTGCCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: SSTESPLSRASIRKAIICRKRRT*WSLPLN
Trigger: GTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCG...ACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp ACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGCACCTAACTTGTAGTTaGCGACCCCGCCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: TLQGLNKKGHYLFLVLLKHLTCS*RPRPPR
Trigger: CCTGGGTGGGCGGGGTCGGCAACTACAAGTTAGGTG...CTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp GAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTTGAGTGCCTCCTGTTaGACTAACACGGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: ESPLSRASIRKAIICSWYLSASC*TNTVGP
Trigger: TGGGCCCACCGTGTTAGTGCAACAGGAGGCACTCAA...GTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp ACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGAGACCTGGCAAGCGGTaGCCGAGCCAAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: TLQGLNKKGHYLFLVLLKRPGKR*PSQRLP
Trigger: GGGAAGTCTTTGGCTCGGGCACCGCTTGCCAGGTCT...CTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGCCTTTTATTTCGTATTaGACTTCAGGTGAGTCATTG +
Preference number: 4 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMPFISY*TSGESL
Trigger: CAATGACTCACCTGAAGTGCAATACGAAATAAAAGG...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp GGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGCCTTTTATTTCGTATTaGACTTCAGGTGAGTCATTG +
Preference number: 4 (lower is better)
Translates to: GQDAWVGPYGFGSVATTWPFISY*TSGESL
Trigger: CAATGACTCACCTGAAGTGCAATACGAAATAAAAGG...CCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp ACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGAAGAGGCGCACCTGCTaGTCTTTGCCTTTGAACGCC +
Preference number: 4 (lower is better)
Translates to: TESPLSRASIRKAIICSWKRRTC*SLPLNA
Trigger: GGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTT...CCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp AAAAATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCTCCATGGTGGGAATGTaGAGGTTCCTGTCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: KNQRQHQGSGLRTERSGISMVGM*RFLSLY
Trigger: GTACAAAGACAGGAACCTCCACATTCCCACCATGGA...GATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GACGCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTACAGGCCCATTTTCCATaGTGGGAATGTGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: DAARWPFISYCTSGESLVQAHFP*WECGGS
Trigger: GGAACCTCCACATTCCCACCATGGAAAATGGGCCTG...TACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGGCTCTGATTCCGTACTaGATCTCCTTCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AARWPFISYCTSGESLVGALIPY*ISFSSF
Trigger: GAAGGAGCTGAAGGAGATCCAGTACGGAATCAGAGC...CCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000597011.5
CDS-3UTR CCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCGGCCCTTACGGCTTTaGGAGTGTCGCAACCACATG +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVRPLRL*ECRNHM
Trigger: CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCG...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGTCCCCAGATTGCCTTTaGGTGGCGACATCTAGACTG +
Preference number: 4 (lower is better)
Translates to: ARWPFISYCTSGESLVGRSPDCL*VATSRL
Trigger: CAGTCTAGATGTCGCCACCCAAAGGCAATCTGGGGA...CCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR CCA 90 bp CCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGTCCCTGCAGCTCACCTaGATCTCCTTCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PTLQGLNKKGHYLFLVLLSLQLT*ISFSSF
Trigger: GAAGGAGCTGAAGGAGATCCAGGTGAGCTGCAGGGA...CAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp CAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCACTACTGAAGGAGGCTaGCTGTTAGTCCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: QHRKPTLQGLNKKGHYLFTTEGG*LLVQGL
Trigger: GAGCCCCTGGACTAACAGCCAGCCTCCTTCAGTAGT...GAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp AGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTGGGCCAGGCTTCTTATaGGGCTTCTGTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SSTESPLSRASIRKAIICGPGFL*GFCVIS
Trigger: GGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCC...ACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598162.5
CDS-3UTR GCA 90 bp CCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGCGGAAGAGGCGCACCTaGTGGTCTTTGCCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: PFISYCTSGESLVGRRVLRKRRT*WSLPLN
Trigger: GTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCG...CAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGAGCGGAAGAGGCGCACCTaGTGGTCTTTGCCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: LQGLNKKGHYLFLVLLKERKRRT*WSLPLN
Trigger: GTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCG...CTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp AAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTATTGAGTGCCTCCTGTTaGACTAACACGGTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: KPTLQGLNKKGHYLFLVLLSASC*TNTVGP
Trigger: TGGGCCCACCGTGTTAGTGCAACAGGAGGCACTCAA...TAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp ACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATTTGTACAGGATTCGGTaGACTGGGCAGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: TEQHRKPTLQGLNKKGHYLYRIR*TGQTWQ
Trigger: TTGCCAGGTCTGCCCAGTGCACCGAATCCTGTACAA...ATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp GAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTTGTACAGGATTCGGTaGACTGGGCAGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: ESPLSRASIRKAIICSWYLYRIR*TGQTWQ
Trigger: TTGCCAGGTCTGCCCAGTGCACCGAATCCTGTACAA...GTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp CCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGATCTGGAGCACAGCCTaGAGCTTCACACCGGGAACA +
Preference number: 4 (lower is better)
Translates to: PFISYCTSGESLVGRRVLIWSTA*SFTPGT
Trigger: TGTTCCCGGTGTGAAGCTGCAGGCTGTGCTCCAGAT...CAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGGTTGCACTAACACGGTaGGCCCATAATTCCCACCTA +
Preference number: 4 (lower is better)
Translates to: ARWPFISYCTSGESLVGRVALTR*AHNSHL
Trigger: TAGGTGGGAATTATGGGCCCACCGTGTTAGTGCAAC...CCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTTCCATGGTGGGAATGTaGAGGTTCCTGTCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: PQSSTESPLSRASIRKAISMVGM*RFLSLY
Trigger: GTACAAAGACAGGAACCTCCACATTCCCACCATGGA...AATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp CAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCGCCCATTTTCCATGGTaGGAATGTGGAGGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: QSSTESPLSRASIRKAIIAHFPW*ECGGSC
Trigger: ACAGGAACCTCCACATTCCCACCATGGAAAATGGGC...GATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp GAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACCAGGCCCATTTTCCATaGTGGGAATGTGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: ESPLSRASIRKAIICSWYQAHFP*WECGGS
Trigger: GGAACCTCCACATTCCCACCATGGAAAATGGGCCTG...GTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp GAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTCCTTCAGCTCCTTCTaGAAGCGGAGGATCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ESPLSRASIRKAIICSWYSFSSF*KRRISS
Trigger: TGAGCTGATCCTCCGCTTCCAGAAGGAGCTGAAGGA...GTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp GCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGGCTCTGATTCCGTACTaGATCTCCTTCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ARWPFISYCTSGESLVGRALIPY*ISFSSF
Trigger: GAAGGAGCTGAAGGAGATCCAGTACGGAATCAGAGC...CCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000597011.5
CDS-3UTR CCA 90 bp CCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGGGGAACATCCACTCGTaGGCTCTGATTCCGTACTGG +
Preference number: 4 (lower is better)
Translates to: PFISYCTSGESLVGRRVLGNIHS*ALIPYW
Trigger: CCAGTACGGAATCAGAGCCCACGAGTGGATGTTCCC...CAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000597011.5
CDS-3UTR CCA 90 bp CAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGAGGCTACTACTGAAGGAGGCTaGCTGTTAGTCCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: QGLNKKGHYLFLVLLKEATTEGG*LLVQGL
Trigger: GAGCCCCTGGACTAACAGCCAGCCTCCTTCAGTAGT...AGCCTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGGGGCCAGGCTTCTTATaGGGCTTCTGTGTCATTTCC +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVGPGFL*GFCVIS
Trigger: GGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCC...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR TCA 90 bp AAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTAGCTGGTCTTTGCCTTTaGACGCCTTCATGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: KPTLQGLNKKGHYLFLVLAGLCL*TPSCPQ
Trigger: TTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGC...TAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR GCA 90 bp CAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTGTCATTTCCAGCTaGAGGTCTGCAGCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: QSSTESPLSRASIRKAIICVISS*RSAALK
Trigger: TTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACA...GATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598162.5
CDS-3UTR GCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGTTGTACAGGATTCGGTaGACTGGGCAGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVLYRIR*TGQTWQ
Trigger: TTGCCAGGTCTGCCCAGTGCACCGAATCCTGTACAA...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGTTGTACAGGATTCGGTaGACTGGGCAGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PFISYCTSGESLVGRRVLLYRIR*TGQTWQ
Trigger: TTGCCAGGTCTGCCCAGTGCACCGAATCCTGTACAA...CAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGGAAGTAGGCACCCACTaGGCAGAGAATGACGAACAG +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVEVGTH*AENDEQ
Trigger: CTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTC...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp CCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGGAAGTAGGCACCCACTaGGCAGAGAATGACGAACAG +
Preference number: 4 (lower is better)
Translates to: PFISYCTSGESLVGRRVLEVGTH*AENDEQ
Trigger: CTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTC...CAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp GAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACGTTGCACTAACACGGTaGGCCCATAATTCCCACCTA +
Preference number: 4 (lower is better)
Translates to: ESPLSRASIRKAIICSWYVALTR*AHNSHL
Trigger: TAGGTGGGAATTATGGGCCCACCGTGTTAGTGCAAC...GTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp ACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATGTTGCACTAACACGGTaGGCCCATAATTCCCACCTA +
Preference number: 4 (lower is better)
Translates to: TEQHRKPTLQGLNKKGHYVALTR*AHNSHL
Trigger: TAGGTGGGAATTATGGGCCCACCGTGTTAGTGCAAC...ATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp AGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTGCCCATTTTCCATGGTaGGAATGTGGAGGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SSTESPLSRASIRKAIICAHFPW*ECGGSC
Trigger: ACAGGAACCTCCACATTCCCACCATGGAAAATGGGC...ACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp AAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACAGGCCCATTTTCCATaGTGGGAATGTGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: KPTLQGLNKKGHYLFLVLQAHFP*WECGGS
Trigger: GGAACCTCCACATTCCCACCATGGAAAATGGGCCTG...TAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp AGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTGGTCTCAGTGATTCATaGAAAGGGCCTTTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSTESPLSRASIRKAIICGLSDS*KGPFSH
Trigger: GTGGGAGAAAGGCCCTTTCCATGAATCACTGAGACC...ACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS-3UTR TCA 90 bp ACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGCTGGTCTTTGCCTTTaGACGCCTTCATGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: TLQGLNKKGHYLFLVLLKAGLCL*TPSCPQ
Trigger: TTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGC...CTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR TCA 90 bp CTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGAGTGTTCCTGGTACTACTaGAGGAGGCTGGCTGTTAGT +
Preference number: 4 (lower is better)
Translates to: LQGLNKKGHYLFLVLLKECSWYY*RRLAVS
Trigger: ACTAACAGCCAGCCTCCTTCAGTAGTACCAGGAACA...CTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CCA 90 bp CCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGTCCACCATCAGCATGTaGTCGGTAAATGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PTLQGLNKKGHYLFLVLLSTISM*SVNVFP
Trigger: TGGGAAGACATTTACCGACCACATGCTGATGGTGGA...CAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598162.5
CDS-3UTR CCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGGTTGCACTAACACGGTaGGCCCATAATTCCCACCTA +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVVALTR*AHNSHL
Trigger: TAGGTGGGAATTATGGGCCCACCGTGTTAGTGCAAC...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGTCCACCATCAGCATGTaGTCGGTAAATGTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVSTISM*SVNVFP
Trigger: TGGGAAGACATTTACCGACCACATGCTGATGGTGGA...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CCA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGTCCATGGTGGGAATGTaGAGGTTCCTGTCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: WPFISYCTSGESLVGRRVSMVGM*RFLSLY
Trigger: GTACAAAGACAGGAACCTCCACATTCCCACCATGGA...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR GCA 90 bp CCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGCCTTTTATTTCGTATTaGACTTCAGGTGAGTCATTG +
Preference number: 4 (lower is better)
Translates to: PFISYCTSGESLVGRRVLPFISY*TSGESL
Trigger: CAATGACTCACCTGAAGTGCAATACGAAATAAAAGG...CAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS CCA 90 bp GAGGGAGACCGGGGTCACGGAGCCTCCAGGGAAGTAGGCACCCACTaGGCAGAGAATGACGAACAGGAGCGCGCGCGTGGGCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: EGDRGHGASREVGTH*AENDEQERARGLAD
Trigger: GTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTCCGTGACCCCGGTCTCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000595376.1
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
CDS GCA 90 bp CCAAAGACTTCCCGCACGCGGCCCTCCTCCAGGGCCCGCAGCAACTaGTTCATGGTGATCGTGCGCTCCACCACCCGGAACTCACCCCAG +
Preference number: 5 (lower is better)
Translates to: PKTSRTRPSSRARSN*FMVIVRSTTRNSPQ
Trigger: CTGGGGTGAGTTCCGGGTGGTGGAGCGCACGATCACCATGAAGCAGTTGCTGCGGGCCCTGGAGGAGGGCCGCGTGCGGGAAGTCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS-3UTR CAA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGAGCATCCGGTCCATGTaGAGCCAGGGGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLSIRSM*SQGRKR
Trigger: CCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCT...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS GCA 90 bp CCAGGCCCGCCTCCCTCAGACCTAAGTAAGAGTCCAGACTCTAGCTaGCTCCTCCCTCAGACCCGAAGTCTGGGCCCCCAGCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PGPPPSDLSKSPDSS*LLPQTRSLGPQPLL
Trigger: GAGGAGGGGCTGGGGGCCCAGACTTCGGGTCTGAGGGAGGAGGCAGCTAGAGTCTGGACTCTTACTTAGGTCTGAGGGAGGCGGGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS CCA 90 bp GGGCACAGCAGGGGCCCTGGCAGCTCGCTCGCCACCTCCTGCACTTaGAGGTCCCACTGGCCTGCCTGTTCTGTCCCAGTTTCAGTCCAT +
Preference number: 5 (lower is better)
Translates to: GHSRGPGSSLATSCT*RSHWPACSVPVSVH
Trigger: ATGGACTGAAACTGGGACAGAACAGGCAGGCCAGTGGGACCTCCAAGTGCAGGAGGTGGCGAGCGAGCTGCCAGGGCCCCTGCTGTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS-3UTR CAA 90 bp GGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCAGAGACTCGGGGACCCAGTCCTaGTCCACTTCGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: GSALTALGVSQPHGGARDSGTQS*STSMSR
Trigger: CCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGA...GTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS TCA 90 bp GGCTGGTGCCGGCGGCATCGGGGACCCAGTCCTTGTCCACTTCGATaGGCCGGCGGATGCACTCCAGCAACTCCAGCTTGTCGAAACTCG +
Preference number: 5 (lower is better)
Translates to: GWCRRHRGPSPCPLR*AGGCTPATPACRNS
Trigger: CGAGTTTCGACAAGCTGGAGTTGCTGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCGGCACCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000595376.1
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
CDS GCA 90 bp AGGGCTCGCTGGAAAGAGCTGAGTCAGCTCCCGCCCCCTCCTCCATaGTGCGGCAAAGTCAAACGCAAGCGCCTCCCACCCCAGAGACCT +
Preference number: 5 (lower is better)
Translates to: RARWKELSQLPPPPP*CGKVKRKRLPPQRP
Trigger: AGGTCTCTGGGGTGGGAGGCGCTTGCGTTTGACTTTGCCGCAGCATGGAGGAGGGGGCGGGAGCTGACTCAGCTCTTTCCAGCGAGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS GCA 90 bp GAATGCACCCCCAGCTGGGGCCACATTCCTGTCCCAACACGCCAGTaGCCACCCTCTGCCTTGGTTGCCCAGGAGACCCAGCTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: ECTPSWGHIPVPTRQ*PPSALVAQETQLSP
Trigger: AGGAGACAGCTGGGTCTCCTGGGCAACCAAGGCAGAGGGTGGGCACTGGCGTGTTGGGACAGGAATGTGGCCCCAGCTGGGGGTGCATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS-3UTR CAA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCAGCATCCGGTCCATGTaGAGCCAGGGGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSSIRSM*SQGRKR
Trigger: CCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCT...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACTCGGGGACCCAGTCCTaGTCCACTTCGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: WGPRCLGRPLRLWECRNHSGTQS*STSMSR
Trigger: CCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGA...GTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp GATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCGTTGGGGCGTGAGGTaGAGAGAGACAGAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: DAWVGPYGFGSVATTWGRRWGVR*RETEWP
Trigger: AGGCCACTCTGTCTCTCTCAACCTCACGCCCCAACG...GCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS GCA 90 bp GCTCGCTGGAAAGAGCTGAGTCAGCTCCCGCCCCCTCCTCCATGCTaGGGCAAAGTCAAACGCAAGCGCCTCCCACCCCAGAGACCTTTG +
Preference number: 5 (lower is better)
Translates to: ARWKELSQLPPPPPC*GKVKRKRLPPQRPL
Trigger: CAAAGGTCTCTGGGGTGGGAGGCGCTTGCGTTTGACTTTGCCGCAGCATGGAGGAGGGGGCGGGAGCTGACTCAGCTCTTTCCAGCGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS CCA 90 bp TGGAGGTTCCTGTCTTTGTACAGGATTCGGTGCACTGGGCAGACCTaGCAAGCGGTGCCCGAGCCAAAGACTTCCCGCACGCGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: WRFLSLYRIRCTGQT*QAVPEPKTSRTRPS
Trigger: GGAGGGCCGCGTGCGGGAAGTCTTTGGCTCGGGCACCGCTTGCCAGGTCTGCCCAGTGCACCGAATCCTGTACAAAGACAGGAACCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS CCA 90 bp TGTGGGGAGGCGTTGGGGCGTGAGGTTGAGAGAGACAGAGTGGCCTaGCCTGGCCTGCCCTGTGAGCTGGGTGAGTTGGCACTGATTCTG +
Preference number: 5 (lower is better)
Translates to: CGEALGREVERDRVA*PGLPCELGELALIL
Trigger: CAGAATCAGTGCCAACTCACCCAGCTCACAGGGCAGGCCAGGCCAGGCCACTCTGTCTCTCTCAACCTCACGCCCCAACGCCTCCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402551.5
ENST00000596981.1
ENST00000601496.5
ENST00000601681.5
CDS-3UTR CAA 90 bp AAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCAGCATCCGGTCCATGTaGAGCCAGGGGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: KMPGSALTALGVSQPHGGSIRSM*SQGRKR
Trigger: CCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCT...GCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCGCGTGGGTCCCCAGATaGCCTTTGGGTGGCGACATC +
Preference number: 5 (lower is better)
Translates to: PGVWPENGEIRNRGQGVSAWVPR*PLGGDI
Trigger: GATGTCGCCACCCAAAGGCAATCTGGGGACCCACGC...GGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS GCA 90 bp ATGGCCGAAAGCACGCACGCTGGTCCCTGTGTCTCCAACGCCCAGTaGGCCAGTCGTTCTGGGGATGGGGGTGCTACTTACCCACCTAAC +
Preference number: 5 (lower is better)
Translates to: MAESTHAGPCVSNAQ*ASRSGDGGATYPPN
Trigger: GTTAGGTGGGTAAGTAGCACCCCCATCCCCAGAACGACTGGCGCACTGGGCGTTGGAGACACAGGGACCAGCGTGCGTGCTTTCGGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS-3UTR CAA 90 bp GGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGGCCAAGATGCCTGTGCAGGTCTGCAGCCTaGAAACTGGAGGAGGCATAT +
Preference number: 5 (lower is better)
Translates to: GVMGGPEPATRGWGPRCLCRSAA*KLEEAY
Trigger: ATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCA...CAGGCATCTTGGCCCCCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp GGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCAGAGACCGCACCTGCTGGTCTTaGCCTTTGAACGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: GSALTALGVSQPHGGARDRTCWS*PLNAFM
Trigger: CATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCG...GTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCTCCAGCAACTCCAGCTaGTCGAAACTCGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSSSNSS*SKLGRH
Trigger: GTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGA...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGTGTTCACAGCCCCGCTaGAGTGCCTCCTGTTGCACT +
Preference number: 5 (lower is better)
Translates to: LTARQGVMGGPEPATRGWCSQPR*SASCCT
Trigger: AGTGCAACAGGAGGCACTCAAGCGGGGCTGTGAACA...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS TCA 90 bp GGTGGTCGGGCCCATACAGCCAGAGGACCTGTTCACAGCCCCGCTTaGGTGCCTCCTGTTGCACTAACACGGTGGGCCCATAATTCCCAC +
Preference number: 5 (lower is better)
Translates to: GGRAHTARGPVHSPA*VPPVALTRWAHNSH
Trigger: GTGGGAATTATGGGCCCACCGTGTTAGTGCAACAGGAGGCACTCAAGCGGGGCTGTGAACAGGTCCTCTGGCTGTATGGGCCCGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
CDS TCA 90 bp GGTGGTCGGGCCCATACAGCCAGAGGACCTGTTCACAGCCCCGCTTaGGTGCCTCCTGTTGCACTAACACGGTGGGCCCATAATTCCTGG +
Preference number: 5 (lower is better)
Translates to: GGRAHTARGPVHSPA*VPPVALTRWAHNSW
Trigger: CCAGGAATTATGGGCCCACCGTGTTAGTGCAACAGGAGGCACTCAAGCGGGGCTGTGAACAGGTCCTCTGGCTGTATGGGCCCGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599510.1
CDS GCA 90 bp CGCAGCATCCGGTCCATGTTGAGCCAGGGGCGGAAGAGGCGCACCTaGTGGTCTTTGCCTTTGAACGCCTTCATGCCCTCAAACAGCTGC +
Preference number: 5 (lower is better)
Translates to: RSIRSMLSQGRKRRT*WSLPLNAFMPSNSC
Trigger: GCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000595376.1
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000601681.5
CDS CCA 90 bp AGCATCCGGTCCATGTTGAGCCAGGGGCGGAAGAGGCGCACCTGCTaGTCTTTGCCTTTGAACGCCTTCATGCCCTCAAACAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: SIRSMLSQGRKRRTC*SLPLNAFMPSNSCP
Trigger: GGGGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545387.6
ENST00000599246.5
CDS CCA 90 bp TCACCTTCATGTGACATCCAGAGGCATGGCCGAAAGCACGCACGCTaGTCCCTGTGTCTCCAACGCCCAGTGCGCCAGTCGTTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: SPSCDIQRHGRKHAR*SLCLQRPVRQSFWG
Trigger: TCCCCAGAACGACTGGCGCACTGGGCGTTGGAGACACAGGGACCAGCGTGCGTGCTTTCGGCCATGCCTCTGGATGTCACATGAAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS-3UTR CAA 90 bp GGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCGCCAGAGACTGCTGGTCTTTGCCTTaGAACGCCTTCATGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GSALTALGVSQPHGGARDCWSLP*NAFMPS
Trigger: TGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCA...GTCTCTGGCGCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp GGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCGCACCTGCTGGTCTTaGCCTTTGAACGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: GREASAGVTRCYGSVDLERTCWS*PLNAFM
Trigger: CATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCG...CTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp GAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCCGCACCTGCTGGTCTTaGCCTTTGAACGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: EASAGVTRCYGSVDLEHSRTCWS*PLNAFM
Trigger: CATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCG...GCTGTGCTCCAGATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCTCCAGCAACTCCAGCTaGTCGAAACTCGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: PGVWPENGEIRNRGQGVSSSNSS*SKLGRH
Trigger: GTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGA...GGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAATCGGGGACCCAGTCCTaGTCCACTTCGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: RGQGVSLTARQGVMGGPESGTQS*STSMSR
Trigger: CCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGA...TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGTGTTCACAGCCCCGCTaGAGTGCCTCCTGTTGCACT +
Preference number: 5 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMCSQPR*SASCCT
Trigger: AGTGCAACAGGAGGCACTCAAGCGGGGCTGTGAACA...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGTCGGCCCTTACGGCTTaGGGAGTGTCGCAACCACAT +
Preference number: 5 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMSALTA*GVSQPH
Trigger: ATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGA...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp AAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGGCTCGGCCCTTACGGCTTaGGGAGTGTCGCAACCACAT +
Preference number: 5 (lower is better)
Translates to: KMPGSALTALGVSQPHGGSALTA*GVSQPH
Trigger: ATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGA...GCCCCCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp TTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGACGAGGGGCTGGGGCCAAGGTGTATCCTaGACCGCACGACAAGGAGTA +
Preference number: 5 (lower is better)
Translates to: LTARQGVMGGPEPATRGWGQGVS*TARQGV
Trigger: TACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCC...CCAGCCCCTCGTCGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGCTAGACTGCTCAGCCTaGCAGCCATGCTTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGLDCSA*QPCFCP
Trigger: GGGGCAGAAGCATGGCTGCAAGGCTGAGCAGTCTAG...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS TCA 90 bp AGGGAAGGCACACAGGTAAGTGAAGGCCTCCGGGTACCCAAGTGCTaGCAGGCCTTAGAAGACCAAGGACCGACAGGTCCTGCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: REGTQVSEGLRVPKC*QALEDQGPTGPAPP
Trigger: TGGGGGAGCAGGACCTGTCGGTCCTTGGTCTTCTAAGGCCTGTCAGCACTTGGGTACCCGGAGGCCTTCACTTACCTGTGTGCCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS CCA 90 bp AGCATCCGGTCCATGTTGAGCCAGGGGCGGAAGAGGCGCACCTGCTaGTCTTTGCCTTTGAACGCCTTCATGCCCTCAAACAGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SIRSMLSQGRKRRTC*SLPLNAFMPSNSCR
Trigger: CCTGCAGCTGTTTGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000595376.1
ENST00000597011.5
ENST00000598162.5
ENST00000601681.5
CDS CCA 90 bp GGTGGGAATGTGGAGGTTCCTGTCTTTGTACAGGATTCGGTGCACTaGGCAGACCTGGCAAGCGGTGCCCGAGCCAAAGACTTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: GGNVEVPVFVQDSVH*ADLASGARAKDFPH
Trigger: GTGCGGGAAGTCTTTGGCTCGGGCACCGCTTGCCAGGTCTGCCCAGTGCACCGAATCCTGTACAAAGACAGGAACCTCCACATTCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS CCA 90 bp CGTGAGCCACCGCCTCTGGCCTCTGTGAAGGCTTTCACAATGCCCTaGGTCACCTCACCAGAGAACATGCAGCTCCGAATACTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: REPPPLASVKAFTMP*VTSPENMQLRILGL
Trigger: GAGCCCCAGTATTCGGAGCTGCATGTTCTCTGGTGAGGTGACCCAGGGCATTGTGAAAGCCTTCACAGAGGCCAGAGGCGGTGGCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS-3UTR CAA 90 bp ACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAATGCTGGTCTTTGCCTTaGAACGCCTTCATGCCCTCA +
Preference number: 5 (lower is better)
Translates to: TAAPGVWPENGEIRNRGQCWSLP*NAFMPS
Trigger: TGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCA...TTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp TGGGGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACTGCTGGTCTTTGCCTTaGAACGCCTTCATGCCCTCA +
Preference number: 5 (lower is better)
Translates to: WGPRCLGRPLRLWECRNHCWSLP*NAFMPS
Trigger: TGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCA...GTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGGCCAAGGTGTATCCCGCACCTGCTGGTCTTaGCCTTTGAACGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: PGVWPENGEIRNRGQGVSRTCWS*PLNAFM
Trigger: CATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCG...GGATACACCTTGGCCCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGAGCATCCGGTCCATGTaGAGCCAGGGGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: DPESGPRCILDRTTRSNGSIRSM*SQGRKR
Trigger: CCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCT...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGTCCAGCAACTCCAGCTaGTCGAAACTCGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: PESGPRCILDRTTRSNGRSSNSS*SKLGRH
Trigger: GTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGA...CCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp ATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCTCGGGGACCCAGTCCTaGTCCACTTCGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: IRNRGQGVSLTARQGVMGSGTQS*STSMSR
Trigger: CCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGA...GCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGTGTTCACAGCCCCGCTaGAGTGCCTCCTGTTGCACT +
Preference number: 5 (lower is better)
Translates to: PESGPRCILDRTTRSNGRCSQPR*SASCCT
Trigger: AGTGCAACAGGAGGCACTCAAGCGGGGCTGTGAACA...CCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGTCGGCCCTTACGGCTTaGGGAGTGTCGCAACCACAT +
Preference number: 5 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGSALTA*GVSQPH
Trigger: ATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGA...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp GGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGGGGCCAAGGTGTATCCTaGACCGCACGACAAGGAGTA +
Preference number: 5 (lower is better)
Translates to: GQDAWVGPYGFGSVATTWGQGVS*TARQGV
Trigger: TACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCC...CCATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp AATCAACGGCAGCACCAGGGGTCTGGCCTGAGAACGGAGAGATCCGGAATCGGGTTGTCGCTAGGTGAGTaGCTGGGAGATGGGCCTGCA +
Preference number: 5 (lower is better)
Translates to: NQRQHQGSGLRTERSGIGLSLGE*LGDGPA
Trigger: TGCAGGCCCATCTCCCAGCAACTCACCTAGCGACAA...CCCGATTCCGGATCTCTCCGTTCTCAGGCCAGACCCCTGGTGCTGCCGTTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR CAA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGAATGGGCGTGGTCACTaGTCGCTAGGTGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMNGRGH*SLGELL
Trigger: CAGCAACTCACCTAGCGACAAGTGACCACGCCCATT...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR CAA 90 bp GGGCCAAGATGCCTGGGTCGGCCCTTACGGCTTTGGGAGTGTCGCAACCACATGTGCAGGTCTGCAGCCTaGAAACTGGAGGAGGCATAT +
Preference number: 5 (lower is better)
Translates to: GPRCLGRPLRLWECRNHMCRSAA*KLEEAY
Trigger: ATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCA...CATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGACCCAGGCATCTTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAATGTTCACAGCCCCGCTaGAGTGCCTCCTGTTGCACT +
Preference number: 5 (lower is better)
Translates to: RGQGVSLTARQGVMGGPECSQPR*SASCCT
Trigger: AGTGCAACAGGAGGCACTCAAGCGGGGCTGTGAACA...TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAACCCGCGTCGGCCCTTACGGCTTaGGGAGTGTCGCAACCACAT +
Preference number: 5 (lower is better)
Translates to: QGVSLTARQGVMGGPEPASALTA*GVSQPH
Trigger: ATGTGGTTGCGACACTCCCAAAGCCGTAAGGGCCGA...CGCGGGTTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS TCA 90 bp CTTCGTGGGTCCAGTAGACAAAGATGTTCATGGTTCCCACCTCGGTaGGCTGGTGGTCGGGCCCATACAGCCAGAGGACCTGTTCACAGC +
Preference number: 5 (lower is better)
Translates to: LRGSSRQRCSWFPPR*AGGRAHTARGPVHS
Trigger: GCTGTGAACAGGTCCTCTGGCTGTATGGGCCCGACCACCAGCTCACCGAGGTGGGAACCATGAACATCTTTGTCTACTGGACCCACGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS GCA 90 bp TCCATGGTGGGAATGTGGAGGTTCCTGTCTTTGTACAGGATTCGGTaGACTGGGCAGACCTGGCAAGCGGTGCCCGAGCCAAAGACTTCC +
Preference number: 5 (lower is better)
Translates to: SMVGMWRFLSLYRIR*TGQTWQAVPEPKTS
Trigger: GGAAGTCTTTGGCTCGGGCACCGCTTGCCAGGTCTGCCCAGTGCACCGAATCCTGTACAAAGACAGGAACCTCCACATTCCCACCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS CCA 90 bp GTCAAACGCAAGCGCCTCCCACCCCAGAGACCTTTGGTCGCAGCCTaGAGATCAGCTCAGACAAGAAAACAACCAGGGAAGGCACACAGG +
Preference number: 5 (lower is better)
Translates to: VKRKRLPPQRPLVAA*RSAQTRKQPGKAHR
Trigger: CCTGTGTGCCTTCCCTGGTTGTTTTCTTGTCTGAGCTGATCTCCAGGCTGCGACCAAAGGTCTCTGGGGTGGGAGGCGCTTGCGTTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS-3UTR CAA 90 bp GTCATTGGTAGGGAGGCGAGTGCTGGCGTGACGAGATGCTACGGGTCGGTGGATTGCAGGTCTGCAGCCTaGAAACTGGAGGAGGCATAT +
Preference number: 5 (lower is better)
Translates to: VIGREASAGVTRCYGSVDCRSAA*KLEEAY
Trigger: ATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCA...ATCCACCGACCCGTAGCATCTCGTCACGCCAGCACTCGCCTCCCTACCAATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGTGCTGGTCTTTGCCTTaGAACGCCTTCATGCCCTCA +
Preference number: 5 (lower is better)
Translates to: PESGPRCILDRTTRSNGRCWSLP*NAFMPS
Trigger: TGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCA...CCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CCACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTAGCATCCGGTCCATGTaGAGCCAGGGGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PQSSTESPLSRASIRKAISIRSM*SQGRKR
Trigger: CCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCT...AATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CAA 90 bp GATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGTCCAGCAACTCCAGCTaGTCGAAACTCGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: DPESGPRCILDRTTRSNGSSNSS*SKLGRH
Trigger: GTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGA...CCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGACCTGAAGGCCAAGGTGTATCCTaGACCGCACGACAAGGAGTA +
Preference number: 5 (lower is better)
Translates to: RGQGVSLTARQGVMGGPEGQGVS*TARQGV
Trigger: TACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCC...TTCAGGTCCGCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS TCA 90 bp GCTTCACTCCTGGAGGCTTCCAGGGACCAGTCCTGGTTTCCCCACTaGCCTCCACCCAATGCCTTCCCATCTGTGAGCCTTTTTGTCCAT +
Preference number: 5 (lower is better)
Translates to: ASLLEASRDQSWFPH*PPPNAFPSVSLFVH
Trigger: ATGGACAAAAAGGCTCACAGATGGGAAGGCATTGGGTGGAGGTCAGTGGGGAAACCAGGACTGGTCCCTGGAAGCCTCCAGGAGTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS-3UTR CAA 90 bp CAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCAGCATCCGGTCCATGTaGAGCCAGGGGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: QSSTESPLSRASIRKAIISIRSM*SQGRKR
Trigger: CCTCTTCCGCCCCTGGCTCAACATGGACCGGATGCT...GATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CAA 90 bp GACGCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTATCGGGGACCCAGTCCTaGTCCACTTCGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: DAARWPFISYCTSGESLVSGTQS*STSMSR
Trigger: CCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGA...TACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp ATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCGGCCAAGGTGTATCCTaGACCGCACGACAAGGAGTA +
Preference number: 5 (lower is better)
Translates to: IRNRGQGVSLTARQGVMGGQGVS*TARQGV
Trigger: TACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCC...GCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS TCA 90 bp AATGTCTTCCCAAACACCAGGGGCTCGCCGGGGCCAGGCTTCTTATaGGGCTTCTGTGTCATTTCCAGCTGCAGGTCTGCAGCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: NVFPNTRGSPGPGFL*GFCVISSCRSAALK
Trigger: TTTCAAGGCTGCAGACCTGCAGCTGGAAATGACACAGAAGCCTCATAAGAAGCCTGGCCCCGGCGAGCCCCTGGTGTTTGGGAAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000595376.1
ENST00000597011.5
ENST00000598162.5
ENST00000601681.5
CDS-3UTR CAA 90 bp ATCCGGAATCGGGGCCAAGGTGTATCCTTGACCGCACGACAAGGAGTAATGGGCTGCAGGTCTGCAGCCTaGAAACTGGAGGAGGCATAT +
Preference number: 5 (lower is better)
Translates to: IRNRGQGVSLTARQGVMGCRSAA*KLEEAY
Trigger: ATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCA...GCCCATTACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCCCCGATTCCGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp AGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTCGGGGACCCAGTCCTaGTCCACTTCGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: SPLSRASIRKAIICSWYYSGTQS*STSMSR
Trigger: CCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGA...GTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CAA 90 bp CTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGAGTCGGGGACCCAGTCCTaGTCCACTTCGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LQGLNKKGHYLFLVLLKESGTQS*STSMSR
Trigger: CCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGA...CTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CAA 90 bp GACGCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTATGTTCACAGCCCCGCTaGAGTGCCTCCTGTTGCACT +
Preference number: 5 (lower is better)
Translates to: DAARWPFISYCTSGESLVCSQPR*SASCCT
Trigger: AGTGCAACAGGAGGCACTCAAGCGGGGCTGTGAACA...TACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp GGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGAGGCTGGCGGGCTCCAGGGAATCTaGGGAGGCCAACCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: GLNKKGHYLFLVLLKEAGGLQGI*GGQPLR
Trigger: TCTCAGAGGTTGGCCTCCCAAGATTCCCTGGAGCCC...GCCAGCCTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599246.5
CDS TCA 90 bp GATCAGCTCAGACAAGAAAACAACCAGGGAAGGCACACAGGTAAGTaGAGGCCTCCGGGTACCCAAGTGCTGACAGGCCTTAGAAGACCA +
Preference number: 5 (lower is better)
Translates to: DQLRQENNQGRHTGK*RPPGTQVLTGLRRP
Trigger: TGGTCTTCTAAGGCCTGTCAGCACTTGGGTACCCGGAGGCCTTCACTTACCTGTGTGCCTTCCCTGGTTGTTTTCTTGTCTGAGCTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS-3UTR CAA 90 bp GAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGCGCACCTGCTGGTCTTaGCCTTTGAACGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: EQHRKPTLQGLNKKGHYLRTCWS*PLNAFM
Trigger: CATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCG...CAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CAA 90 bp CAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCTCCAGCAACTCCAGCTaGTCGAAACTCGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: QHRKPTLQGLNKKGHYLFSSNSS*SKLGRH
Trigger: GTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGA...GAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CAA 90 bp ACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATTGTTCACAGCCCCGCTaGAGTGCCTCCTGTTGCACT +
Preference number: 5 (lower is better)
Translates to: TEQHRKPTLQGLNKKGHYCSQPR*SASCCT
Trigger: AGTGCAACAGGAGGCACTCAAGCGGGGCTGTGAACA...ATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CAA 90 bp AGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGTTCACAGCCCCGCTaGAGTGCCTCCTGTTGCACT +
Preference number: 5 (lower is better)
Translates to: STESPLSRASIRKAIICSCSQPR*SASCCT
Trigger: AGTGCAACAGGAGGCACTCAAGCGGGGCTGTGAACA...GGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS TCA 90 bp TCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTaGAGGAGGCTGGCTGTTAGTCCAGGGGCTCATGGGACACCAACT +
Preference number: 5 (lower is better)
Translates to: SRASIRKAIICSWYY*RRLAVSPGAHGTPT
Trigger: AGTTGGTGTCCCATGAGCCCCTGGACTAACAGCCAGCCTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS GCA 90 bp ATGGTTTGTTTTCAGGGACCAGGGAGGTCACTTAGCACTGAGCCCTaGACGGTGCTGATGATGTCACCTTCATGTGACATCCAGAGGCAT +
Preference number: 5 (lower is better)
Translates to: MVCFQGPGRSLSTEP*TVLMMSPSCDIQRH
Trigger: ATGCCTCTGGATGTCACATGAAGGTGACATCATCAGCACCGTGCAGGGCTCAGTGCTAAGTGACCTCCCTGGTCCCTGAAAACAAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS-3UTR CAA 90 bp GACGCCGCCCGCTGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTATGCTGGTCTTTGCCTTaGAACGCCTTCATGCCCTCA +
Preference number: 5 (lower is better)
Translates to: DAARWPFISYCTSGESLVCWSLP*NAFMPS
Trigger: TGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCA...TACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCAGCGGGCGGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp ACAGAGCAGCACAGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCGCACCTGCTGGTCTTaGCCTTTGAACGCCTTCATG +
Preference number: 5 (lower is better)
Translates to: TEQHRKPTLQGLNKKGHYRTCWS*PLNAFM
Trigger: CATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCG...ATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCTGTGCTGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CAA 90 bp CCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGTCCAGCAACTCCAGCTaGTCGAAACTCGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: PFISYCTSGESLVGRRVLSSNSS*SKLGRH
Trigger: GTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGA...CAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGAGGCTTCCAGCAACTCCAGCTaGTCGAAACTCGGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: QGLNKKGHYLFLVLLKEASSNSS*SKLGRH
Trigger: GTGCCTGCCGAGTTTCGACAAGCTGGAGTTGCTGGA...AGCCTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CAA 90 bp TGGCCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGGGCCAAGGTGTATCCTaGACCGCACGACAAGGAGTA +
Preference number: 5 (lower is better)
Translates to: WPFISYCTSGESLVGRRVGQGVS*TARQGV
Trigger: TACTCCTTGTCGTGCGGTCAAGGATACACCTTGGCC...CACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS-3UTR CAA 90 bp CAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGGAGGCTTGCAGGTCTGCAGCCTaGAAACTGGAGGAGGCATAT +
Preference number: 5 (lower is better)
Translates to: QGLNKKGHYLFLVLLKEACRSAA*KLEEAY
Trigger: ATATGCCTCCTCCAGTTTCAAGGCTGCAGACCTGCA...AGCCTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598162.5
CDS-3UTR CAA 90 bp AGAAAGCCCACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTATGCTGGTCTTTGCCTTaGAACGCCTTCATGCCCTCA +
Preference number: 5 (lower is better)
Translates to: RKPTLQGLNKKGHYLFLVCWSLP*NAFMPS
Trigger: TGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCA...TACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGTGGGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CAA 90 bp ACTCTCCAGGGCCTCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTGAAGTGCTGGTCTTTGCCTTaGAACGCCTTCATGCCCTCA +
Preference number: 5 (lower is better)
Translates to: TLQGLNKKGHYLFLVLLKCWSLP*NAFMPS
Trigger: TGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCA...CTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGAGGCCCTGGAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598162.5
ENST00000599246.5
CDS-3UTR CAA 90 bp CCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGTGTGAGCTGGGTGAGTaGGCACTGATTCTGGAAGAT +
Preference number: 5 (lower is better)
Translates to: PFISYCTSGESLVGRRVLCELGE*ALILED
Trigger: ATCTTCCAGAATCAGTGCCAACTCACCCAGCTCACA...CAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS-3UTR CAA 90 bp CCTTTTATTTCGTATTGCACTTCAGGTGAGTCATTGGTAGGGAGGCGAGTGCTGAAATACAAACCCATTTaGGCAGTGACTCCAATTCCC +
Preference number: 5 (lower is better)
Translates to: PFISYCTSGESLVGRRVLKYKPI*AVTPIP
Trigger: GGGAATTGGAGTCACTGCCAAAATGGGTTTGTATTT...CAGCACTCGCCTCCCTACCAATGACTCACCTGAAGTGCAATACGAAATAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402551.5
CDS GCA 72 bp TCCCGCACGCGGCCCTCCTCCAGGGCCCGCAGCAACTaGTTCATGGTGATCGTGCGCTCCACCACCCGGAAC +
Preference number: 6 (lower is better)
Translates to: SRTRPSSRARSN*FMVIVRSTTRN
Trigger: GTTCCGGGTGGTGGAGCGCACGATCACCATGAAGCAGTTGCTGCGGGCCCTGGAGGAGGGCCGCGTGCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS TCA 72 bp GGCCCTCCTCCAGGGCCCGCAGCAACTGCTTCATGGTaGTCGTGCGCTCCACCACCCGGAACTCACCCCAGG +
Preference number: 6 (lower is better)
Translates to: GPPPGPAATASW*SCAPPPGTHPR
Trigger: CCTGGGGTGAGTTCCGGGTGGTGGAGCGCACGATCACCATGAAGCAGTTGCTGCGGGCCCTGGAGGAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS CCA 72 bp CGGGGTCACGGAGCCTCCAGGGAAGTAGGCACCCACTaGGCAGAGAATGACGAACAGGAGCGCGCGCGTGGG +
Preference number: 6 (lower is better)
Translates to: RGHGASREVGTH*AENDEQERARG
Trigger: CCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCCAGTGGGTGCCTACTTCCCTGGAGGCTCCGTGACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000595376.1
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
CDS GCA 72 bp CCCAGCTGGGGCCACATTCCTGTCCCAACACGCCAGTaGCCACCCTCTGCCTTGGTTGCCCAGGAGACCCAG +
Preference number: 6 (lower is better)
Translates to: PSWGHIPVPTRQ*PPSALVAQETQ
Trigger: CTGGGTCTCCTGGGCAACCAAGGCAGAGGGTGGGCACTGGCGTGTTGGGACAGGAATGTGGCCCCAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS CCA 72 bp GGGCAGAGAATGACGAACAGGAGCGCGCGCGTGGGCTaGCTGACACCCAGCGAGGGCTCGTTCCCAATGAGC +
Preference number: 6 (lower is better)
Translates to: GQRMTNRSARVG*LTPSEGSFPMS
Trigger: GCTCATTGGGAACGAGCCCTCGCTGGGTGTCAGCCAGCCCACGCGCGCGCTCCTGTTCGTCATTCTCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000595376.1
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
CDS TCA 72 bp CAGCTTGTCGAAACTCGGCAGGCACAGGCGCATGGCTaGGCGCAGCATCCGGTCCATGTTGAGCCAGGGGCG +
Preference number: 6 (lower is better)
Translates to: QLVETRQAQAHG*AQHPVHVEPGA
Trigger: CGCCCCTGGCTCAACATGGACCGGATGCTGCGCTCAGCCATGCGCCTGTGCCTGCCGAGTTTCGACAAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000595376.1
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000601681.5
CDS TCA 72 bp GCTGGGAGATGGGCCTGCAGCGTGGTCTTGCTGGTGTaGGGCTCCAGGGATTCCGGGGTGATCAGAGCGTGG +
Preference number: 6 (lower is better)
Translates to: AGRWACSVVLLV*GSRDSGVIRAW
Trigger: CCACGCTCTGATCACCCCGGAATCCCTGGAGCCTCACACCAGCAAGACCACGCTGCAGGCCCATCTCCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402551.5
ENST00000596981.1
ENST00000601496.5
ENST00000601681.5
CDS TCA 72 bp CGGCGGCATCGGGGACCCAGTCCTTGTCCACTTCGATaGGCCGGCGGATGCACTCCAGCAACTCCAGCTTGT +
Preference number: 6 (lower is better)
Translates to: RRHRGPSPCPLR*AGGCTPATPAC
Trigger: ACAAGCTGGAGTTGCTGGAGTGCATCCGCCGGCTCATCGAAGTGGACAAGGACTGGGTCCCCGATGCCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000595376.1
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
CDS TCA 72 bp AGGGCCTGGCCCTCAGGAGACCTCACAGGATGTGGCTaGAAGGACCTGAATGCACCCCCAGCTGGGGCCACA +
Preference number: 6 (lower is better)
Translates to: RAWPSGDLTGCG*KDLNAPPAGAT
Trigger: TGTGGCCCCAGCTGGGGGTGCATTCAGGTCCTTTCAGCCACATCCTGTGAGGTCTCCTGAGGGCCAGGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS GCA 72 bp AGCACGCACGCTGGTCCCTGTGTCTCCAACGCCCAGTaGGCCAGTCGTTCTGGGGATGGGGGTGCTACTTAC +
Preference number: 6 (lower is better)
Translates to: STHAGPCVSNAQ*ASRSGDGGATY
Trigger: GTAAGTAGCACCCCCATCCCCAGAACGACTGGCGCACTGGGCGTTGGAGACACAGGGACCAGCGTGCGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS CCA 72 bp TGTGACATCCAGAGGCATGGCCGAAAGCACGCACGCTaGTCCCTGTGTCTCCAACGCCCAGTGCGCCAGTCG +
Preference number: 6 (lower is better)
Translates to: CDIQRHGRKHAR*SLCLQRPVRQS
Trigger: CGACTGGCGCACTGGGCGTTGGAGACACAGGGACCAGCGTGCGTGCTTTCGGCCATGCCTCTGGATGTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS GCA 72 bp CGAGATGCTACGGGTCGGTGGATCTGGAGCACAGCCTaGAGCTTCACACCGGGAACATCCACTCGTGGGCTC +
Preference number: 6 (lower is better)
Translates to: RDATGRWIWSTA*SFTPGTSTRGL
Trigger: GAGCCCACGAGTGGATGTTCCCGGTGTGAAGCTGCAGGCTGTGCTCCAGATCCACCGACCCGTAGCATCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
CDS CCA 72 bp TATGAGAGACACAAACACAGTGCGACAGCCAGCCTGTaGGCAGGAGAGCTGCCCCAGAGCGGCTGCGGCCAT +
Preference number: 6 (lower is better)
Translates to: YERHKHSATASL*AGELPQSGCGH
Trigger: ATGGCCGCAGCCGCTCTGGGGCAGCTCTCCTGCCCACAGGCTGGCTGTCGCACTGTGTTTGTGTCTCTCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596981.1
CDS CAA 72 bp GGCCCATACAGCCAGAGGACCTGTTCACAGCCCCGCTaGAGTGCCTCCTGTTGCACTAACACGGTGGGCCCA +
Preference number: 6 (lower is better)
Translates to: GPYSQRTCSQPR*SASCCTNTVGP
Trigger: TGGGCCCACCGTGTTAGTGCAACAGGAGGCACTCAAGCGGGGCTGTGAACAGGTCCTCTGGCTGTATGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS TCA 72 bp GCCCATACAGCCAGAGGACCTGTTCACAGCCCCGCTTaGGTGCCTCCTGTTGCACTAACACGGTGGGCCCAT +
Preference number: 6 (lower is better)
Translates to: AHTARGPVHSPA*VPPVALTRWAH
Trigger: ATGGGCCCACCGTGTTAGTGCAACAGGAGGCACTCAAGCGGGGCTGTGAACAGGTCCTCTGGCTGTATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS GCA 72 bp CGGTCCATGTTGAGCCAGGGGCGGAAGAGGCGCACCTaGTGGTCTTTGCCTTTGAACGCCTTCATGCCCTCA +
Preference number: 6 (lower is better)
Translates to: RSMLSQGRKRRT*WSLPLNAFMPS
Trigger: TGAGGGCATGAAGGCGTTCAAAGGCAAAGACCAGCAGGTGCGCCTCTTCCGCCCCTGGCTCAACATGGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000595376.1
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000601681.5
CDS GCA 72 bp GGTCCCCAGATTGCCTTTGGGTGGCGACATCTAGACTaGTCAGCCTTGCAGCCATGCTTCTGCCCCAGAGCG +
Preference number: 6 (lower is better)
Translates to: GPQIAFGWRHLD*SALQPCFCPRA
Trigger: CGCTCTGGGGCAGAAGCATGGCTGCAAGGCTGAGCAGTCTAGATGTCGCCACCCAAAGGCAATCTGGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402551.5
ENST00000601496.5
CDS GCA 72 bp CCTCCCTCAGACCTAAGTAAGAGTCCAGACTCTAGCTaGCTCCTCCCTCAGACCCGAAGTCTGGGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: PPSDLSKSPDSS*LLPQTRSLGPQ
Trigger: CTGGGGGCCCAGACTTCGGGTCTGAGGGAGGAGGCAGCTAGAGTCTGGACTCTTACTTAGGTCTGAGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS CCA 72 bp CTGTCTTTGTACAGGATTCGGTGCACTGGGCAGACCTaGCAAGCGGTGCCCGAGCCAAAGACTTCCCGCACG +
Preference number: 6 (lower is better)
Translates to: LSLYRIRCTGQT*QAVPEPKTSRT
Trigger: CGTGCGGGAAGTCTTTGGCTCGGGCACCGCTTGCCAGGTCTGCCCAGTGCACCGAATCCTGTACAAAGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS CCA 72 bp AGGATGTGGCTGAAAGGACCTGAATGCACCCCCAGCTaGGGCCACATTCCTGTCCCAACACGCCAGTGCCCA +
Preference number: 6 (lower is better)
Translates to: RMWLKGPECTPS*GHIPVPTRQCP
Trigger: TGGGCACTGGCGTGTTGGGACAGGAATGTGGCCCCAGCTGGGGGTGCATTCAGGTCCTTTCAGCCACATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS CAA 72 bp GACGTGAATGGGCGTGGTCACTTGTCGCTAGGTGAGTaGCTGGGAGATGGGCCTGCAGCGTGGTCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: DVNGRGHLSLGE*LGDGPAAWSCW
Trigger: CCAGCAAGACCACGCTGCAGGCCCATCTCCCAGCAACTCACCTAGCGACAAGTGACCACGCCCATTCACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402551.5
ENST00000596981.1
ENST00000601496.5
ENST00000601681.5
CDS TCA 72 bp GATGGACGTGAATGGGCGTGGTCACTTGTCGCTAGGTaGGTTGCTGGGAGATGGGCCTGCAGCGTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: DGREWAWSLVAR*VAGRWACSVVL
Trigger: CAAGACCACGCTGCAGGCCCATCTCCCAGCAACTCACCTAGCGACAAGTGACCACGCCCATTCACGTCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402551.5
ENST00000596981.1
ENST00000601496.5
ENST00000601681.5
CDS GCA 72 bp GGTCCCCAGATTGCCTTTGGGTGGCGACATCTAGACTaGTCAGCCTTGCAGCCATGCTTCTGCCCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: GPQIAFGWRHLD*SALQPCFCPEG
Trigger: TCCCTCTGGGCAGAAGCATGGCTGCAAGGCTGAGCAGTCTAGATGTCGCCACCCAAAGGCAATCTGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596981.1
CDS CCA 72 bp GTGGAGGTTCCTGTCTTTGTACAGGATTCGGTGCACTaGGCAGACCTGGCAAGCGGTGCCCGAGCCAAAGAC +
Preference number: 6 (lower is better)
Translates to: VEVPVFVQDSVH*ADLASGARAKD
Trigger: GTCTTTGGCTCGGGCACCGCTTGCCAGGTCTGCCCAGTGCACCGAATCCTGTACAAAGACAGGAACCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS CAA 90 bp TGGAAGATGGACGTGAATGGGCGTGGTCACTTGTCGCTAGGTGAGTaGCTGGGAGATGGGCCTGCAGCGTGGTCTTGCTGGTGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: WKMDVNGRGHLSLGE*LGDGPAAWSCWCEA
Trigger: AGCCTCACACCAGCAAGACCACGCTGCAGGCCCATCTCCCAGCAACTCACCTAGCGACAAGTGACCACGCCCATTCACGTCCATCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402551.5
ENST00000596981.1
ENST00000601496.5
ENST00000601681.5
CDS CAA 90 bp TGCTGCGGCAAAGTCAAACGCAAGCGCCTCCCACCCCAGAGACCTTaGGTCGCAGCCTGGAGATCAGCTCAGACAAGAAAACAACCAGGG +
Preference number: 6 (lower is better)
Translates to: CCGKVKRKRLPPQRP*VAAWRSAQTRKQPG
Trigger: CCCTGGTTGTTTTCTTGTCTGAGCTGATCTCCAGGCTGCGACCAAAGGTCTCTGGGGTGGGAGGCGCTTGCGTTTGACTTTGCCGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS TCA 72 bp TCCAGTAGACAAAGATGTTCATGGTTCCCACCTCGGTaGGCTGGTGGTCGGGCCCATACAGCCAGAGGACCT +
Preference number: 6 (lower is better)
Translates to: SSRQRCSWFPPR*AGGRAHTARGP
Trigger: AGGTCCTCTGGCTGTATGGGCCCGACCACCAGCTCACCGAGGTGGGAACCATGAACATCTTTGTCTACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS TCA 72 bp ACACAGGTAAGTGAAGGCCTCCGGGTACCCAAGTGCTaGCAGGCCTTAGAAGACCAAGGACCGACAGGTCCT +
Preference number: 6 (lower is better)
Translates to: TQVSEGLRVPKC*QALEDQGPTGP
Trigger: AGGACCTGTCGGTCCTTGGTCTTCTAAGGCCTGTCAGCACTTGGGTACCCGGAGGCCTTCACTTACCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS CCA 72 bp ACAAAGATGTTCATGGTTCCCACCTCGGTGAGCTGGTaGTCGGGCCCATACAGCCAGAGGACCTGTTCACAG +
Preference number: 6 (lower is better)
Translates to: TKMFMVPTSVSW*SGPYSQRTCSQ
Trigger: CTGTGAACAGGTCCTCTGGCTGTATGGGCCCGACCACCAGCTCACCGAGGTGGGAACCATGAACATCTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000593515.5
ENST00000597011.5
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS CCA 72 bp ATTTACACAGAAAGTCCACACGGGGGTGAGGGGCTTTaGAGGCTCAAACGACTGTGGGAGCTGGGTATGGGG +
Preference number: 6 (lower is better)
Translates to: IYTESPHGGEGL*RLKRLWELGMG
Trigger: CCCCATACCCAGCTCCCACAGTCGTTTGAGCCTCCAAAGCCCCTCACCCCCGTGTGGACTTTCTGTGTAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS TCA 72 bp CATGCTTCTGCCCAGAGGGATAGGACACCCACAGTATaGGAGACACAAACACAGTGCGACAGCCAGCCTGTG +
Preference number: 6 (lower is better)
Translates to: HASAQRDRTPTV*ETQTQCDSQPV
Trigger: CACAGGCTGGCTGTCGCACTGTGTTTGTGTCTCTCATACTGTGGGTGTCCTATCCCTCTGGGCAGAAGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596981.1
CDS TCA 72 bp TGGGAGACAGATTTACACAGAAAGTCCACACGGGGGTaGGGGGCTTTGGAGGCTCAAACGACTGTGGGAGCT +
Preference number: 6 (lower is better)
Translates to: WETDLHRKSTRG*GALEAQTTVGA
Trigger: AGCTCCCACAGTCGTTTGAGCCTCCAAAGCCCCTCACCCCCGTGTGGACTTTCTGTGTAAATCTGTCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS CCA 72 bp CCCCAGCCCTTGTCATTCCATTCCACCATCAGCATGTaGTCGGTAAATGTCTTCCCAAACACCAGGGGCTCG +
Preference number: 6 (lower is better)
Translates to: PQPLSFHSTISM*SVNVFPNTRGS
Trigger: CGAGCCCCTGGTGTTTGGGAAGACATTTACCGACCACATGCTGATGGTGGAATGGAATGACAAGGGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000593515.5
ENST00000595376.1
ENST00000597011.5
ENST00000598162.5
ENST00000601681.5
CDS TCA 72 bp AGACAAGAAAACAACCAGGGAAGGCACACAGGTAAGTaGAGGCCTCCGGGTACCCAAGTGCTGACAGGCCTT +
Preference number: 6 (lower is better)
Translates to: RQENNQGRHTGK*RPPGTQVLTGL
Trigger: AAGGCCTGTCAGCACTTGGGTACCCGGAGGCCTTCACTTACCTGTGTGCCTTCCCTGGTTGTTTTCTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS GCA 72 bp TTTCAGGGACCAGGGAGGTCACTTAGCACTGAGCCCTaGACGGTGCTGATGATGTCACCTTCATGTGACATC +
Preference number: 6 (lower is better)
Translates to: FQGPGRSLSTEP*TVLMMSPSCDI
Trigger: GATGTCACATGAAGGTGACATCATCAGCACCGTGCAGGGCTCAGTGCTAAGTGACCTCCCTGGTCCCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS GCA 72 bp GGACCAGTCCTGGTTTCCCCACTGACCTCCACCCAATaGCTTCCCATCTGTGAGCCTTTTTGTCCATCTGAA +
Preference number: 6 (lower is better)
Translates to: GPVLVSPLTSTQ*LPICEPFCPSE
Trigger: TTCAGATGGACAAAAAGGCTCACAGATGGGAAGGCATTGGGTGGAGGTCAGTGGGGAAACCAGGACTGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS CCA 72 bp GCTCTGATTCCGTACTGGATCTCCTTCAGCTCCTTCTaGAAGCGGAGGATCAGCTCAGGCCCATTTTCCATG +
Preference number: 6 (lower is better)
Translates to: ALIPYWISFSSF*KRRISSGPFSM
Trigger: CATGGAAAATGGGCCTGAGCTGATCCTCCGCTTCCAGAAGGAGCTGAAGGAGATCCAGTACGGAATCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316273.11
ENST00000402551.5
ENST00000545387.6
ENST00000597011.5
CDS CAA 72 bp ATTGCCTTTGGGTGGCGACATCTAGACTGCTCAGCCTaGCAGCCATGCTTCCCATTAAAGCCTCGTGCTCCT +
Preference number: 6 (lower is better)
Translates to: IAFGWRHLDCSA*QPCFPLKPRAP
Trigger: AGGAGCACGAGGCTTTAATGGGAAGCATGGCTGCAAGGCTGAGCAGTCTAGATGTCGCCACCCAAAGGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601681.5
CDS CAA 72 bp AAAGTCAAACGCAAGCGCCTCCCACCCCAGAGACCTTaGGTCGCAGCCTGGAGATCAGCTCAGACAAGAAAA +
Preference number: 6 (lower is better)
Translates to: KVKRKRLPPQRP*VAAWRSAQTRK
Trigger: TTTTCTTGTCTGAGCTGATCTCCAGGCTGCGACCAAAGGTCTCTGGGGTGGGAGGCGCTTGCGTTTGACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595376.1
CDS CCA 72 bp AGGCCATTATCTGTTCCTGGTACTACTGAAGGAGGCTaGCTGTTAGTCCAGGGGCTCATGGGACACCAACTT +
Preference number: 6 (lower is better)
Translates to: RPLSVPGTTEGG*LLVQGLMGHQL
Trigger: AAGTTGGTGTCCCATGAGCCCCTGGACTAACAGCCAGCCTCCTTCAGTAGTACCAGGAACAGATAATGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1
CDS TCA 72 bp TCAATAAGAAAGGCCATTATCTGTTCCTGGTACTACTaGAGGAGGCTGGCTGTTAGTCCAGGGGCTCATGGG +
Preference number: 6 (lower is better)
Translates to: SIRKAIICSWYY*RRLAVSPGAHG
Trigger: CCCATGAGCCCCTGGACTAACAGCCAGCCTCCTTCAGTAGTACCAGGAACAGATAATGGCCTTTCTTATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598162.5
ENST00000599246.5
ENST00000599510.1