RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCAT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000060982

Ensembl transcript IDs: ENST00000261192.12, ENST00000342945.9, ENST00000538118.5, ENST00000539282.5, ENST00000539780.5, ENST00000543099.1, ENST00000544418.1, ENST00000546285.1, ENST00000612790.1

Found 455 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATACAAAGATCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCTaGCAGCCAGCCAGCTACAACATAATGTGGAAAGGACAATGGTGG +
Preference number: 1 (lower is better)
Translates to: IQRSIRHKTLSLVVA*QPASYNIMWKGQWW
Trigger: CCACCATTGTCCTTTCCACATTATGTTGTAGCTGGCTGGCTGTCAGGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGATCTTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR GCA 90 bp TCACAGCTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTaGATCCTAACCACTTGCTCATCAAATCTCCATTCAAAGAAAAGA +
Preference number: 1 (lower is better)
Translates to: SQLLNKENITHSSSP*ILTTCSSNLHSKKR
Trigger: TCTTTTCTTTGAATGGAGATTTGATGAGCAAGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAGCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR TCA 90 bp TTAACAAGAAAGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATaGCAATGGTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTT +
Preference number: 1 (lower is better)
Translates to: LTRKRQGQFPVLLLK*QWWIVFSLSGDLQF
Trigger: AAACTGGAGGTCTCCTGATAAGGAGAACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCTTTCTTGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR GCA 90 bp ATATTGAATCTCTATCCAGTGGTGTGGTTTCTGGTCTTTCTGGTGTaGTCAATTCTCTCTGTGTCATTTTGGTGTAAAAATACTATCCTA +
Preference number: 1 (lower is better)
Translates to: ILNLYPVVWFLVFLV*SILSVSFWCKNTIL
Trigger: TAGGATAGTATTTTTACACCAAAATGACACAGAGAGAATTGAGCACACCAGAAAGACCAGAAACCACACCACTGGATAGAGATTCAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261192.12
3UTR-3UTR CCA 90 bp TCTTCTTTTGGTGTATCACGAGTTGAATCCTTAATAAATGACTGCCACAAAGAACCTCTTCCTGCTGTGTaGCCCATGGCCTGGGGGTTG +
Preference number: 2 (lower is better)
Translates to: SSFGVSRVESLINDCHKEPLPAV*PMAWGL
Trigger: CAACCCCCAGGCCATGGGCCACACAGCAGGAAGAGG...TTCTTTGTGGCAGTCATTTATTAAGGATTCAACTCGTGATACACCAAAAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR CAA 90 bp AATGAATACAAAATGTGTGACCCTTGGGTAATTCTGCACTTGGCTTaGTTCTCCCTTGGTGCTTTTGAGGACAATTTCTGCAAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: NEYKMCDPWVILHLA*FSLGAFEDNFCKAW
Trigger: CCAGGCCTTGCAGAAATTGTCCTCAAAAGCACCAAGGGAGAACAAAGCCAAGTGCAGAATTACCCAAGGGTCACACATTTTGTATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
3UTR-3UTR TCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTAGTCTTGTAGTCGCCTaGCAGCCAGCCAGCTACAAC +
Preference number: 2 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCSLVVA*QPASYN
Trigger: GTTGTAGCTGGCTGGCTGTCAGGCGACTACAAGACT...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR-3UTR GCA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTAATTTTTCCACAGACTaGAGGGTGAAGGGTGGTTTC +
Preference number: 2 (lower is better)
Translates to: LLNKENITHSSSPCILTTNFSTD*RVKGGF
Trigger: GAAACCACCCTTCACCCTGCAGTCTGTGGAAAAATT...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR-3UTR GCA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTAACACCCTTAGAATGTTaGTCGGGGTACACAGTGCGC +
Preference number: 2 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLTPLEC*SGYTVR
Trigger: GCGCACTGTGTACCCCGAGCAACATTCTAAGGGTGT...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR-3UTR TCA 90 bp GACAGGGTCTGGAGAAGTGGGTCACCGAGCACTCTGACATTTTTAAGTTCAGTTACTTTCTTCCACCTTTaGATCTTTAAAAGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: DRVWRSGSPSTLTFLSSVTFFHL*IFKRGL
Trigger: CAAACCCCTTTTAAAGATTCAAAGGTGGAAGAAAGT...AACTGAACTTAAAAATGTCAGAGTGCTCGGTGACCCACTTCTCCAGACCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261192.12
3UTR-3UTR CCA 90 bp GACAGGGTCTGGAGAAGTGGGTCACCGAGCACTCTGACATTTTTAAGTTCAGTTACTATATGTCAGCCATaGGGGATACAAAGATCTATA +
Preference number: 2 (lower is better)
Translates to: DRVWRSGSPSTLTFLSSVTICQP*GIQRSI
Trigger: TATAGATCTTTGTATCCCCCATGGCTGACATATAGT...AACTGAACTTAAAAATGTCAGAGTGCTCGGTGACCCACTTCTCCAGACCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261192.12
3UTR-3UTR CCA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTCAGGGACCAGTTTTGTaGAAGACAATTTTTCCACAG +
Preference number: 2 (lower is better)
Translates to: LLNKENITHSSSPCILTTQGPVL*KTIFPQ
Trigger: CTGTGGAAAAATTGTCTTCCACAAAACTGGTCCCTG...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR-3UTR GCA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTACATAGTAGCTCTCCCTaGATCCTAACCACTTGCTCA +
Preference number: 2 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLHSSSP*ILTTCS
Trigger: TGAGCAAGTGGTTAGGATGCAGGGAGAGCTACTATG...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR-3UTR GCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATGAACTGCTCAGGTTTTaGCTTTGTCTTGACACTTCA +
Preference number: 2 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNELLRF*LCLDTS
Trigger: TGAAGTGTCAAGACAAAGGCAAAACCTGAGCAGTTC...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR-3UTR CCA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTCCAGTAGCATACAGTTaGTATCCTCTATTTTCCATT +
Preference number: 2 (lower is better)
Translates to: LLNKENITHSSSPCILTTPVAYS*YPLFSI
Trigger: AATGGAAAATAGAGGATACCAACTGTATGCTACTGG...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR-3UTR TCA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTACTACTATTTAGTATCTaGGTGAAGTACAAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLLLFSI*VKYKRR
Trigger: CCTCCTTTTGTACTTCACTCAGATACTAAATAGTAG...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR-3UTR TCA 90 bp TCTTCTTTTGGTGTATCACGAGTTGAATCCTTAATAAATGACTGCCACAAAGAACCAAAATACAATGTCTaGGAGTTGACCTTCCAAGGA +
Preference number: 2 (lower is better)
Translates to: SSFGVSRVESLINDCHKEPKYNV*ELTFQG
Trigger: TCCTTGGAAGGTCAACTCTCAGACATTGTATTTTGG...TTCTTTGTGGCAGTCATTTATTAAGGATTCAACTCGTGATACACCAAAAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR-3UTR TCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTGGAAGTTATGAGGACTaGGGGAAACCAAAATACAAT +
Preference number: 2 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCGSYED*GKPKYN
Trigger: ATTGTATTTTGGTTTCCCTCAGTCCTCATAACTTCC...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR-3UTR CCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTAGCTACAACATAATGTaGAAAGGACAATGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCSYNIM*KGQWWE
Trigger: TTCCCACCATTGTCCTTTCCACATTATGTTGTAGCT...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR-3UTR TCA 90 bp TCTTCTTTTGGTGTATCACGAGTTGAATCCTTAATAAATGACTGCCACAAAGAACTGACAAGCTCGGTCTaGAATGTAGAAACTGAAAAA +
Preference number: 2 (lower is better)
Translates to: SSFGVSRVESLINDCHKELTSSV*NVETEK
Trigger: TTTTTCAGTTTCTACATTTCAGACCGAGCTTGTCAG...TTCTTTGTGGCAGTCATTTATTAAGGATTCAACTCGTGATACACCAAAAGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR GCA 72 bp GGAGTTAGCCAAGGCGAAAGCACACCCTTAGAATGTTaGTCGGGGTACACAGTGCGCAGGCGACAGTCAAGA +
Preference number: 3 (lower is better)
Translates to: GVSQGESTPLEC*SGYTVRRRQSR
Trigger: TCTTGACTGTCGCCTGCGCACTGTGTACCCCGAGCAACATTCTAAGGGTGTGCTTTCGCCTTGGCTAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR TCA 72 bp ACAGTGCGCAGGCGACAGTCAAGAGCACCTCAGGCCTaGAAAGAACAGCTTCTCCCAAGATTTCAGATCACC +
Preference number: 3 (lower is better)
Translates to: TVRRRQSRAPQA*KEQLLPRFQIT
Trigger: GGTGATCTGAAATCTTGGGAGAAGCTGTTCTTTTCAGGCCTGAGGTGCTCTTGACTGTCGCCTGCGCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR CCA 72 bp TGGGAAGTAGCCATAAATACAGATGAAGCTCCTCAATaGCCCACCACTCACCTCTTCCTGCTGTGTGGCCCA +
Preference number: 3 (lower is better)
Translates to: WEVAINTDEAPQ*PTTHLFLLCGP
Trigger: TGGGCCACACAGCAGGAAGAGGTGAGTGGTGGGCCATTGAGGAGCTTCATCTGTATTTATGGCTACTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR TCA 72 bp TCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCTaGCAGCCAGCCAGCTACAACATAATGTGGAAAGGA +
Preference number: 3 (lower is better)
Translates to: SIRHKTLSLVVA*QPASYNIMWKG
Trigger: TCCTTTCCACATTATGTTGTAGCTGGCTGGCTGTCAGGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR CCA 72 bp CAGCCAGCCAGCTACAACATAATGTGGAAAGGACAATaGTGGGAAATGCACTCAGGTCTTCCTAATGCACAG +
Preference number: 3 (lower is better)
Translates to: QPASYNIMWKGQ*WEMHSGLPNAQ
Trigger: CTGTGCATTAGGAAGACCTGAGTGCATTTCCCACCATTGTCCTTTCCACATTATGTTGTAGCTGGCTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR GCA 72 bp CTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTaGATCCTAACCACTTGCTCATCAAATCTCCATTCA +
Preference number: 3 (lower is better)
Translates to: LNKENITHSSSP*ILTTCSSNLHS
Trigger: TGAATGGAGATTTGATGAGCAAGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
3UTR-3UTR CAA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAACCCAGTAGCATACAGTaGGTATCCTCTATTTTCCAT +
Preference number: 3 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQPSSIQ*VSSIFH
Trigger: ATGGAAAATAGAGGATACCAACTGTATGCTACTGGG...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
3UTR TCA 72 bp CTCTGGCATGAAGAAACAATCACTCTTGTAACACATTaGTACTACAAACTACATTATGCACAGGTAGCCAAA +
Preference number: 3 (lower is better)
Translates to: LWHEETITLVTH*YYKLHYAQVAK
Trigger: TTTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTTTCTTCATGCCAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
3UTR CCA 72 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTaGTATCCTCTATTTTCCATTGTATCCTCTATTTTC +
Preference number: 3 (lower is better)
Translates to: IQMQQSVPVAYS*YPLFSIVSSIF
Trigger: GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
3UTR CCA 72 bp GAACATCATGCAACTCAAGTTATACGTCTTGTTGATTaGGTCTATTGTAGAATGAAAAATACACTTTCAGAC +
Preference number: 3 (lower is better)
Translates to: EHHATQVIRLVD*VYCRMKNTLSD
Trigger: GTCTGAAAGTGTATTTTTCATTCTACAATAGACCCAATCAACAAGACGTATAACTTGAGTTGCATGATGTTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR GCA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTGACCGGGTCTGCGGCTaGAGAGCGCGGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LLNKENITHSSSPCILTTDRVCG*RARSRL
Trigger: CAGCCGGGACCGCGCTCTGCAGCCGCAGACCCGGTC...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000342945.9
CDS-3UTR CCA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCGAAGCGGGCTGGCCATaGGGAGGCTGCGGGGACGCG +
Preference number: 4 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCIEAGWP*GGCGDA
Trigger: CGCGTCCCCGCAGCCTCCCCATGGCCAGCCCGCTTC...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539282.5
CDS-3UTR CCA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGCGGAGCGAAGCGGGCTaGCCATGGGGAGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQRSEAG*PWGGCG
Trigger: CCCGCAGCCTCCCCATGGCCAGCCCGCTTCGCTCCG...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539282.5
CDS-3UTR GCA 90 bp GTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATCGTGTGGACCGGGTCTaGGGCTGCAGAGCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: VCPSSIQLVSSIFHCILYRVDRV*GCRARS
Trigger: GGACCGCGCTCTGCAGCCGCAGACCCGGTCCACACG...ATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000539780.5
CDS-3UTR GCA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCTTGGGAGCGCTGCCCTaGACTTCCCACCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCILGALP*TSHPAG
Trigger: CCCGGCAGGGTGGGAAGTGCAGGGCAGCGCTCCCAA...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538118.5
CDS-3UTR GCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTGCGGGGACGCGGGGCTaGAGAGAGCGGCAGTGGCAC +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSAGTRG*RERQWH
Trigger: GTGCCACTGCCGCTCTCTGCAGCCCCGCGTCCCCGC...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539282.5
CDS-3UTR TCA 90 bp CCATGGGGGATACAAAGATCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCCGTTACTGCAATCCATaGTACCGTGCGCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PWGIQRSIRHKTLSLVVARYCNP*YRALLS
Trigger: GGAGAGGAGCGCACGGTATCATGGATTGCAGTAACG...GGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGATCTTTGTATCCCCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538118.5
CDS-3UTR GCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCCAAGACCTGGGGCAGTaGCCGAGGCGGCGGCGAGTA +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPQDLGQ*PRRRRV
Trigger: TACTCGCCGCCGCCTCGGGCACTGCCCCAGGTCTTG...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000342945.9
CDS-3UTR GCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATGAGCGCGGTCCCGGCTaGAGCAAGACCTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNERGPG*SKTWGS
Trigger: ACTGCCCCAGGTCTTGCTGCAGCCGGGACCGCGCTC...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000342945.9
CDS-3UTR GCA 90 bp GCTGCTTTCATAGCACAATTCCCCAAAAGCAGAACTGAAACTGTAGCTTTAATACGTGTGGACCGGGTCTaGGGCTGCAGAGCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: AAFIAQFPKSRTETVALIRVDRV*GCRARS
Trigger: GGACCGCGCTCTGCAGCCGCAGACCCGGTCCACACG...TATTAAAGCTACAGTTTCAGTTCTGCTTTTGGGGAATTGTGCTATGAAAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR GCA 90 bp CCATGGGGGATACAAAGATCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCTTCACCCCACTGATGTaGCAGGTCCAGAATGCACCG +
Preference number: 4 (lower is better)
Translates to: PWGIQRSIRHKTLSLVVAFTPLM*QVQNAP
Trigger: CGGTGCATTCTGGACCTGGCACATCAGTGGGGTGAA...GGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGATCTTTGTATCCCCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTGGCTGCAGCAAGACCTaGGGCAGTGCCCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSGCSKT*GSARGG
Trigger: GCCGCCTCGGGCACTGCCCCAGGTCTTGCTGCAGCC...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000342945.9
CDS-3UTR CCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATAGGCTGCAGCAAGACCTaGGGCAGTGCCCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSIGCSKT*GSARGG
Trigger: GCCGCCTCGGGCACTGCCCCAGGTCTTGCTGCAGCC...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000342945.9
CDS-3UTR CCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCTGCAGAGAGCGGCAGTaGCACGGAGCGCGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFCRERQ*HGARGW
Trigger: CCAGCCGCGCGCTCCGTGCCACTGCCGCTCTCTGCA...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539282.5
CDS-3UTR GCA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCAGAGCGCGGTCCCGGCTaGAGCAAGACCTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPERGPG*SKTWGS
Trigger: ACTGCCCCAGGTCTTGCTGCAGCCGGGACCGCGCTC...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000342945.9
CDS-3UTR GCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGCTGCACTTCCCACCCTaGCGGGGTCGCGGCGGTTTT +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQLHFPP*RGRGGF
Trigger: AAAACCGCCGCGACCCCGGCAGGGTGGGAAGTGCAG...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538118.5
CDS-3UTR TCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCGAGGGAAGCTCGAGCTaGGCGGAGGGCAGATCCCAA +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPEGSSS*AEGRSQ
Trigger: TTGGGATCTGCCCTCCGCTCAGCTCGAGCTTCCCTC...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000539780.5
CDS-3UTR TCA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTCTCCCATCCAAACTCTaGGGACCACTCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: LLNKENITHSSSPCILTTLPSKL*GPLHRQ
Trigger: CTGACGGTGGAGTGGTCCTCAGAGTTTGGATGGGAG...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp CCATGGGGGATACAAAGATCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCTCACTCCTGGAAGAATaGTGCCATCTAGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PWGIQRSIRHKTLSLVVASLLEE*CHLVEE
Trigger: CTCCTCCACTAGATGGCATCATTCTTCCAGGAGTGA...GGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGATCTTTGTATCCCCCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp CCATGGGGGATACAAAGATCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCCTCCCTTGGTGCTTTTaGGGACAATTTCTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: PWGIQRSIRHKTLSLVVALPWCF*GQFLQG
Trigger: GCCTTGCAGAAATTGTCCTCAAAAGCACCAAGGGAG...GGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGATCTTTGTATCCCCCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR GCA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCCAAGACCTGGGGCAGTaGCCGAGGCGGCGGCGAGTA +
Preference number: 4 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVQDLGQ*PRRRRV
Trigger: TACTCGCCGCCGCCTCGGGCACTGCCCCAGGTCTTG...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000342945.9
CDS-3UTR GCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAACGTGTGGACCGGGTCTaGGGCTGCAGAGCGCGGTCC +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQRVDRV*GCRARS
Trigger: GGACCGCGCTCTGCAGCCGCAGACCCGGTCCACACG...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000539780.5
CDS-3UTR GCA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTGTGCCAGGTCCAGAATaGACCGCCTTGTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: LLNKENITHSSSPCILTTVPGPE*TALSLL
Trigger: CAGGAGTGACAAGGCGGTGCATTCTGGACCTGGCAC...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp GACAGGGTCTGGAGAAGTGGGTCACCGAGCACTCTGACATTTTTAAGTTCAGTTGCTCAAGATGCGGCTTaGCAGCTTAGGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: DRVWRSGSPSTLTFLSSVAQDAA*QLRTIL
Trigger: GAGAATGGTCCTAAGCTGGCAAGCCGCATCTTGAGC...AACTGAACTTAAAAATGTCAGAGTGCTCGGTGACCCACTTCTCCAGACCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR GCA 90 bp GCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTCGGAGCATCCGTTACTaGAATCCTGGCGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: AQVAKEIYHNSNATVCPSRSIRY*NPGGQG
Trigger: CCCTTGCCCGCCAGGATTGCAGTAACGGATGCTCCG...ACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539282.5
CDS-3UTR CCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGCCTCTTCCTGCTGTGTaGCCCATGGCCTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQPLPAV*PMAWGL
Trigger: CAACCCCCAGGCCATGGGCCACACAGCAGGAAGAGG...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACCGTTACTGCAATCCTaGCGGGCAAGGGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSIPLLQS*RARAAA
Trigger: CGCTGCGGCCCTTGCCCGCCAGGATTGCAGTAACGG...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539282.5
CDS-3UTR TCA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTAGTCTTGTAGTCGCCTaGCAGCCAGCCAGCTACAAC +
Preference number: 4 (lower is better)
Translates to: LLNKENITHSSSPCILTTSLVVA*QPASYN
Trigger: GTTGTAGCTGGCTGGCTGTCAGGCGACTACAAGACT...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCGCTCGGGGTACACAGTaGGCAGGCGACAGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSARGTQ*AGDSQE
Trigger: CTCTTGACTGTCGCCTGCGCACTGTGTACCCCGAGC...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCGCTCGGGGTACACAGTaGGCAGGCGACAGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPARGTQ*AGDSQE
Trigger: CTCTTGACTGTCGCCTGCGCACTGTGTACCCCGAGC...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCGTGTCTTGGGAGCGCTaGCCTGCACTTCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFVSWER*PALPTL
Trigger: CAGGGTGGGAAGTGCAGGGCAGCGCTCCCAAGACAC...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538118.5
CDS-3UTR TCA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCGAGGGAAGCTCGAGCTaGGCGGAGGGCAGATCCCAA +
Preference number: 4 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVEGSSS*AEGRSQ
Trigger: TTGGGATCTGCCCTCCGCTCAGCTCGAGCTTCCCTC...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000539780.5
CDS-3UTR TCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGCTCCCATCCAAACTCTaGGGACCACTCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQLPSKL*GPLHRQ
Trigger: CTGACGGTGGAGTGGTCCTCAGAGTTTGGATGGGAG...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CCATGGGGGATACAAAGATCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCGCAAGAAGGAAGTTATaGGGACTGAGGGAAACCAAA +
Preference number: 4 (lower is better)
Translates to: PWGIQRSIRHKTLSLVVAARRKL*GLRETK
Trigger: TTTGGTTTCCCTCAGTCCTCATAACTTCCTTCTTGC...GGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGATCTTTGTATCCCCCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCAGCTCGGGGTACACAGTaGGCAGGCGACAGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPARGTQ*AGDSQE
Trigger: CTCTTGACTGTCGCCTGCGCACTGTGTACCCCGAGC...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATCAGGTTGACAGGGTCTaGAGAAGTGGGTCACCGAGC +
Preference number: 4 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNQVDRV*RSGSPS
Trigger: GCTCGGTGACCCACTTCTCCAGACCCTGTCAACCTG...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAAGAGGGAAGCTCGAGCTaGGCGGAGGGCAGATCCCAA +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQEGSSS*AEGRSQ
Trigger: TTGGGATCTGCCCTCCGCTCAGCTCGAGCTTCCCTC...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000539780.5
CDS-3UTR TCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATCCCCACCACCTCTTTTaGTCCTCCTTCTCCGGTACA +
Preference number: 4 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNPHHLF*SSFSGT
Trigger: TGTACCGGAGAAGGAGGATCAAAAGAGGTGGTGGGG...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000538118.5
CDS-3UTR TCA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCACTCCCATCCAAACTCTaGGGACCACTCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPLPSKL*GPLHRQ
Trigger: CTGACGGTGGAGTGGTCCTCAGAGTTTGGATGGGAG...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATATGCTGCCACTGAGCTaGCAAGAGGTGGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNMLPLS*QEVEFR
Trigger: CCTGAACTCCACCTCTTGTCAGCTCAGTGGCAGCAT...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGATGCTGCCACTGAGCTaGCAAGAGGTGGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQMLPLS*QEVEFR
Trigger: CCTGAACTCCACCTCTTGTCAGCTCAGTGGCAGCAT...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTTCTCCGGTACACTCTaGGGAGCATCCGTTACTGCA +
Preference number: 4 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQFSGTL*GASVTA
Trigger: TGCAGTAACGGATGCTCCGCAGAGTGTACCGGAGAA...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTGTGCCAGGTCCAGAATaGACCGCCTTGTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSVPGPE*TALSLL
Trigger: CAGGAGTGACAAGGCGGTGCATTCTGGACCTGGCAC...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCTTCACCCCACTGATGTaGCAGGTCCAGAATGCACCG +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPFTPLM*QVQNAP
Trigger: CGGTGCATTCTGGACCTGGCACATCAGTGGGGTGAA...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCGCTCAAGATGCGGCTTaGCAGCTTAGGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCIAQDAA*QLRTIL
Trigger: GAGAATGGTCCTAAGCTGGCAAGCCGCATCTTGAGC...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp CCATGGGGGATACAAAGATCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCGGATATCAGTTAATTTaGTCAAGATGCGGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: PWGIQRSIRHKTLSLVVAGYQLI*SRCGLP
Trigger: TGGCAAGCCGCATCTTGAGCAAATTAACTGATATCC...GGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGATCTTTGTATCCCCCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp GACAGGGTCTGGAGAAGTGGGTCACCGAGCACTCTGACATTTTTAAGTTCAGTTCCAAGTGTTCAAGACTaGTTGGATTTGAGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: DRVWRSGSPSTLTFLSSVPSVQD*LDLRQA
Trigger: TGCTTGCCTCAAATCCAAGCAGTCTTGAACACTTGG...AACTGAACTTAAAAATGTCAGAGTGCTCGGTGACCCACTTCTCCAGACCCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CCA 90 bp ACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCCTCTTCCTGCTGTGTaGCCCATGGCCTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: TTLCTGSQRNLSQFKCNSPLPAV*PMAWGL
Trigger: CAACCCCCAGGCCATGGGCCACACAGCAGGAAGAGG...ACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAACCTCTTCCTGCTGTGTaGCCCATGGCCTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQPLPAV*PMAWGL
Trigger: CAACCCCCAGGCCATGGGCCACACAGCAGGAAGAGG...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp CCATGGGGGATACAAAGATCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCCAGGGACCAGTTTTGTaGAAGACAATTTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: PWGIQRSIRHKTLSLVVAQGPVL*KTIFPQ
Trigger: CTGTGGAAAAATTGTCTTCCACAAAACTGGTCCCTG...GGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGATCTTTGTATCCCCCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp GCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTCGGCTCAGGGAAGACTaGTTAAATTCCAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: AQVAKEIYHNSNATVCPSRLRED*LNSRSA
Trigger: GGCTGACCTGGAATTTAACCAGTCTTCCCTGAGCCG...ACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538118.5
CDS-3UTR TCA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTACCCCACCACCTCTTTTaGTCCTCCTTCTCCGGTACA +
Preference number: 4 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLPHHLF*SSFSGT
Trigger: TGTACCGGAGAAGGAGGATCAAAAGAGGTGGTGGGG...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000538118.5
CDS-3UTR TCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTCTCCCATCCAAACTCTaGGGACCACTCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCLPSKL*GPLHRQ
Trigger: CTGACGGTGGAGTGGTCCTCAGAGTTTGGATGGGAG...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATAGCCACAGGACCTGCTaGCACCCATTATCTACTGCT +
Preference number: 4 (lower is better)
Translates to: VCPSSIQLVSSIFHCILYSHRTC*HPLSTA
Trigger: AGCAGTAGATAATGGGTGTCAGCAGGTCCTGTGGCT...ATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCAGCCACAGGACCTGCTaGCACCCATTATCTACTGCT +
Preference number: 4 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSSHRTC*HPLSTA
Trigger: AGCAGTAGATAATGGGTGTCAGCAGGTCCTGTGGCT...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTCACTCCTGGAAGAATaGTGCCATCTAGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQSLLEE*CHLVEE
Trigger: CTCCTCCACTAGATGGCATCATTCTTCCAGGAGTGA...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTTTAAATTCACCCCACTaGTGTGCCAGGTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: LLNKENITHSSSPCILTTLNSPH*CARSRM
Trigger: CATTCTGGACCTGGCACATCAGTGGGGTGAATTTAA...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTAATGCTGCCACTGAGCTaGCAAGAGGTGGAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: EIYHNSNATVCPSSIQLVMLPLS*QEVEFR
Trigger: CCTGAACTCCACCTCTTGTCAGCTCAGTGGCAGCAT...TACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCAGAGCACCTCAGGCCTaGAAAGAACAGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSRAPQA*KEQLLP
Trigger: TGGGAGAAGCTGTTCTTTTCAGGCCTGAGGTGCTCT...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCATCACCCTCAGGAATaGCAGGTCTCTCTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCIHHPQE*QVSLSH
Trigger: GTGAGAAAGAGAGACCTGTCATTCCTGAGGGTGATG...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR GCA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCAATTCCCTCCCATCTTaGAGTCCCCAGTTCCACCTT +
Preference number: 4 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCINSLPS*SPQFHL
Trigger: AAGGTGGAACTGGGGACTGCAAGATGGGAGGGAATT...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCTTCACCCCACTGATGTaGCAGGTCCAGAATGCACCG +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSFTPLM*QVQNAP
Trigger: CGGTGCATTCTGGACCTGGCACATCAGTGGGGTGAA...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCTTCACCCCACTGATGTaGCAGGTCCAGAATGCACCG +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFFTPLM*QVQNAP
Trigger: CGGTGCATTCTGGACCTGGCACATCAGTGGGGTGAA...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp GACAGGGTCTGGAGAAGTGGGTCACCGAGCACTCTGACATTTTTAAGTTCAGTTCAGTATATCAGAAACTaGGCAAACAACACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: DRVWRSGSPSTLTFLSSVQYIRN*ANNTGC
Trigger: ACAGCCTGTGTTGTTTGCCCAGTTTCTGATATACTG...AACTGAACTTAAAAATGTCAGAGTGCTCGGTGACCCACTTCTCCAGACCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CCA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCGATGAAGCTCCTCAATaGCCCACCACTCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSDEAPQ*PTTHLF
Trigger: GAAGAGGTGAGTGGTGGGCCATTGAGGAGCTTCATC...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTGTTCTTCACACCAGATaGCTCTGGTGTAACAAAGCC +
Preference number: 4 (lower is better)
Translates to: LLNKENITHSSSPCILTTVLHTR*LWCNKA
Trigger: GGCTTTGTTACACCAGAGCCATCTGGTGTGAAGAAC...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp ACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTCCCATCCAAACTCTaGGGACCACTCCACCGTCAG +
Preference number: 4 (lower is better)
Translates to: TTLCTGSQRNLSQFKCNSLPSKL*GPLHRQ
Trigger: CTGACGGTGGAGTGGTCCTCAGAGTTTGGATGGGAG...ACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGGGTTCTGAAGAGGCTTaGTATGAGGTTTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQGSEEA*YEVSPI
Trigger: GATGGGAGAAACCTCATATCAAGCCTCTTCAGAACC...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCGGTTCTGAAGAGGCTTaGTATGAGGTTTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCIGSEEA*YEVSPI
Trigger: GATGGGAGAAACCTCATATCAAGCCTCTTCAGAACC...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATTCACTCCTGGAAGAATaGTGCCATCTAGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNSLLEE*CHLVEE
Trigger: CTCCTCCACTAGATGGCATCATTCTTCCAGGAGTGA...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTCACTCCTGGAAGAATaGTGCCATCTAGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQSLLEE*CHLVEE
Trigger: CTCCTCCACTAGATGGCATCATTCTTCCAGGAGTGA...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCTTAAATTCACCCCACTaGTGTGCCAGGTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCILNSPH*CARSRM
Trigger: CATTCTGGACCTGGCACATCAGTGGGGTGAATTTAA...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCGGTGAGGTATCTCTCTaGCACCTTAAATTCACCCCA +
Preference number: 4 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCIGEVSL*HLKFTP
Trigger: TGGGGTGAATTTAAGGTGTCAGAGAGATACCTCACC...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGAGTCTTGTAGTCGCCTaGCAGCCAGCCAGCTACAAC +
Preference number: 4 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLSLVVA*QPASYN
Trigger: GTTGTAGCTGGCTGGCTGTCAGGCGACTACAAGACT...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATAATTCCCTCCCATCTTaGAGTCCCCAGTTCCACCTT +
Preference number: 4 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNNSLPS*SPQFHL
Trigger: AAGGTGGAACTGGGGACTGCAAGATGGGAGGGAATT...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCGTGCCAGGTCCAGAATaGACCGCCTTGTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSVPGPE*TALSLL
Trigger: CAGGAGTGACAAGGCGGTGCATTCTGGACCTGGCAC...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAAGTGCCAGGTCCAGAATaGACCGCCTTGTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQVPGPE*TALSLL
Trigger: CAGGAGTGACAAGGCGGTGCATTCTGGACCTGGCAC...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACGTGCCAGGTCCAGAATaGACCGCCTTGTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNVPGPE*TALSLL
Trigger: CAGGAGTGACAAGGCGGTGCATTCTGGACCTGGCAC...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCGCTCAAGATGCGGCTTaGCAGCTTAGGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFAQDAA*QLRTIL
Trigger: GAGAATGGTCCTAAGCTGGCAAGCCGCATCTTGAGC...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCGCTCAAGATGCGGCTTaGCAGCTTAGGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSAQDAA*QLRTIL
Trigger: GAGAATGGTCCTAAGCTGGCAAGCCGCATCTTGAGC...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATAACACCCTTAGAATGTTaGTCGGGGTACACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSITPLEC*SGYTVR
Trigger: GCGCACTGTGTACCCCGAGCAACATTCTAAGGGTGT...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTACACCCTTAGAATGTTaGTCGGGGTACACAGTGCGC +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSTPLEC*SGYTVR
Trigger: GCGCACTGTGTACCCCGAGCAACATTCTAAGGGTGT...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCTACGCTCTGCTTTCTTaGTACTGCCTGCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSYALLS*YCLPLP
Trigger: AGGCAGAGGCAGGCAGTAGCAAGAAAGCAGAGCGTA...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR GCA 90 bp ATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTAGCTGATGTTACGCTCTaGTTTCTTGCTACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: ITIQMQQSVPVAYSWYPLADVTL*FLATAC
Trigger: GCAGGCAGTAGCAAGAAAGCAGAGCGTAACATCAGC...TAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGAGGCTCTTACATACTTaGGATTGGCCCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQRLLHT*DWPTGT
Trigger: TGTCCCTGTGGGCCAATCCCAAGTATGTAAGAGCCT...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp CCATGGGGGATACAAAGATCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCCCAGTAGCATACAGTTaGTATCCTCTATTTTCCATT +
Preference number: 4 (lower is better)
Translates to: PWGIQRSIRHKTLSLVVAPVAYS*YPLFSI
Trigger: AATGGAAAATAGAGGATACCAACTGTATGCTACTGG...GGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGATCTTTGTATCCCCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTGATGAAGCTCCTCAATaGCCCACCACTCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSDEAPQ*PTTHLF
Trigger: GAAGAGGTGAGTGGTGGGCCATTGAGGAGCTTCATC...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp ACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCCAACAAGCGTGTCTTaGGAGCGCTGCCCTGCACTT +
Preference number: 4 (lower is better)
Translates to: TTLCTGSQRNLSQFKCNSPTSVS*ERCPAL
Trigger: AAGTGCAGGGCAGCGCTCCCAAGACACGCTTGTTGG...ACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538118.5
3UTR CAA 72 bp TTGGTGCTTTTGAGGACAATTTCTGCAAGGCCTGGTTaGGCTAAAAGGGACACTTCATTGAAGATCTCTAGG +
Preference number: 4 (lower is better)
Translates to: LVLLRTISARPG*AKRDTSLKISR
Trigger: CCTAGAGATCTTCAATGAAGTGTCCCTTTTAGCCAAACCAGGCCTTGCAGAAATTGTCCTCAAAAGCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
3UTR CAA 72 bp AAAATGTGTGACCCTTGGGTAATTCTGCACTTGGCTTaGTTCTCCCTTGGTGCTTTTGAGGACAATTTCTGC +
Preference number: 4 (lower is better)
Translates to: KMCDPWVILHLA*FSLGAFEDNFC
Trigger: GCAGAAATTGTCCTCAAAAGCACCAAGGGAGAACAAAGCCAAGTGCAGAATTACCCAAGGGTCACACATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTCCACCGTCAGCATATaGTCCGTGAACACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSSTVSI*SVNTVP
Trigger: TGGAACTGTGTTCACGGATCATATGCTGACGGTGGA...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCATCCACCGTCAGCATATaGTCCGTGAACACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPSTVSI*SVNTVP
Trigger: TGGAACTGTGTTCACGGATCATATGCTGACGGTGGA...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGGCAAAAAGAGATaGGCCGTAATTCCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQLGKKR*AVIPSH
Trigger: ATGGGAGGGAATTACGGCTCATCTCTTTTTGCCCAA...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp ATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTAAATTCACCCCACTaGTGTGCCAGGTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: ITIQMQQSVPVAYSWYPLLNSPH*CARSRM
Trigger: CATTCTGGACCTGGCACATCAGTGGGGTGAATTTAA...TAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATGGTGAGGTATCTCTCTaGCACCTTAAATTCACCCCA +
Preference number: 4 (lower is better)
Translates to: VCPSSIQLVSSIFHCILYGEVSL*HLKFTP
Trigger: TGGGGTGAATTTAAGGTGTCAGAGAGATACCTCACC...ATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTCAAGTCATCCATGGTaGGGTATCTCTCTGACACCT +
Preference number: 4 (lower is better)
Translates to: VCPSSIQLVSSIFHCILYSSHPW*GISLTP
Trigger: AGGTGTCAGAGAGATACCTCACCATGGATGACTTGA...ATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp ACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTAGTCTTGTAGTCGCCTaGCAGCCAGCCAGCTACAAC +
Preference number: 4 (lower is better)
Translates to: TTLCTGSQRNLSQFKCNSSLVVA*QPASYN
Trigger: GTTGTAGCTGGCTGGCTGTCAGGCGACTACAAGACT...ACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTCCAAAATACAATGTCTaGGAGTTGACCTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LLNKENITHSSSPCILTTPKYNV*ELTFQG
Trigger: TCCTTGGAAGGTCAACTCTCAGACATTGTATTTTGG...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCGCAAGAAGGAAGTTATaGGGACTGAGGGAAACCAAA +
Preference number: 4 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCIARRKL*GLRETK
Trigger: TTTGGTTTCCCTCAGTCCTCATAACTTCCTTCTTGC...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGTTCTCCGGTACACTCTaGGGAGCATCCGTTACTGCA +
Preference number: 4 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLFSGTL*GASVTA
Trigger: TGCAGTAACGGATGCTCCGCAGAGTGTACCGGAGAA...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCAAATACCGGCAGAGTTaGCCTCACAGCAGAGCGATA +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSKYRQS*PHSRAI
Trigger: TATCGCTCTGCTGTGAGGGCAACTCTGCCGGTATTT...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR GCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTAATTCCCTCCCATCTTaGAGTCCCCAGTTCCACCTT +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSNSLPS*SPQFHL
Trigger: AAGGTGGAACTGGGGACTGCAAGATGGGAGGGAATT...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACTTCACCCCACTGATGTaGCAGGTCCAGAATGCACCG +
Preference number: 4 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNFTPLM*QVQNAP
Trigger: CGGTGCATTCTGGACCTGGCACATCAGTGGGGTGAA...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATCATAGTAGCTCTCCCTaGATCCTAACCACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNHSSSP*ILTTCS
Trigger: TGAGCAAGTGGTTAGGATGCAGGGAGAGCTACTATG...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp TCTTCTTTTGGTGTATCACGAGTTGAATCCTTAATAAATGACTGCCACAAAGAACAATCCATGATACCGTaGGCTCCTCTCCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: SSFGVSRVESLINDCHKEQSMIP*APLQDP
Trigger: TGGGTCCTGGAGAGGAGCGCACGGTATCATGGATTG...TTCTTTGTGGCAGTCATTTATTAAGGATTCAACTCGTGATACACCAAAAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538118.5
CDS-3UTR CCA 90 bp ATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTACATACTTGGGATTaGCCCACAGGGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: ITIQMQQSVPVAYSWYPLLHTWD*PTGTLD
Trigger: ATCCAGTGTCCCTGTGGGCCAATCCCAAGTATGTAA...TAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTAAGGCTCTTACATACTTaGGATTGGCCCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLRLLHT*DWPTGT
Trigger: TGTCCCTGTGGGCCAATCCCAAGTATGTAAGAGCCT...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATAAGGCTCTTACATACTTaGGATTGGCCCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSIRLLHT*DWPTGT
Trigger: TGTCCCTGTGGGCCAATCCCAAGTATGTAAGAGCCT...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCAGGCTCTTACATACTTaGGATTGGCCCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSRLLHT*DWPTGT
Trigger: TGTCCCTGTGGGCCAATCCCAAGTATGTAAGAGCCT...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp CCATGGGGGATACAAAGATCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCTGCCTAGTTATAATGTaGCACTCTTGCTGTATTAAT +
Preference number: 4 (lower is better)
Translates to: PWGIQRSIRHKTLSLVVACLVIM*HSCCIN
Trigger: ATTAATACAGCAAGAGTGCCACATTATAACTAGGCA...GGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGATCTTTGTATCCCCCATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp GACAGGGTCTGGAGAAGTGGGTCACCGAGCACTCTGACATTTTTAAGTTCAGTTATAAGAGATGTGTTCTaGCCTTCTTTGCTTATGATC +
Preference number: 4 (lower is better)
Translates to: DRVWRSGSPSTLTFLSSVIRDVF*PSLLMI
Trigger: GATCATAAGCAAAGAAGGCCAGAACACATCTCTTAT...AACTGAACTTAAAAATGTCAGAGTGCTCGGTGACCCACTTCTCCAGACCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261192.12
3UTR CAA 72 bp GAATACAAAATGTGTGACCCTTGGGTAATTCTGCACTaGGCTTTGTTCTCCCTTGGTGCTTTTGAGGACAAT +
Preference number: 4 (lower is better)
Translates to: EYKMCDPWVILH*ALFSLGAFEDN
Trigger: ATTGTCCTCAAAAGCACCAAGGGAGAACAAAGCCAAGTGCAGAATTACCCAAGGGTCACACATTTTGTATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
3UTR CAA 72 bp CTTTGCCTAGACCTTCCAAACTCTGCGCGTAACTTCTaGAGAGATCTGAATAAAGGCCAATATTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LCLDLPNSARNF*RDLNKGQYFHR
Trigger: CCTGTGAAAATATTGGCCTTTATTCAGATCTCTCAAGAAGTTACGCGCAGAGTTTGGAAGGTCTAGGCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCTCAGCATATGATCCGTaGACACAGTTCCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCISAYDP*TQFQKP
Trigger: TGGTTTTTGGAACTGTGTTCACGGATCATATGCTGA...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGTCCACCGTCAGCATATaGTCCGTGAACACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLSTVSI*SVNTVP
Trigger: TGGAACTGTGTTCACGGATCATATGCTGACGGTGGA...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTCCACCGTCAGCATATaGTCCGTGAACACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVSTVSI*SVNTVP
Trigger: TGGAACTGTGTTCACGGATCATATGCTGACGGTGGA...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCGGTTCTGAAGAGGCTTaGTATGAGGTTTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSGSEEA*YEVSPI
Trigger: GATGGGAGAAACCTCATATCAAGCCTCTTCAGAACC...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTAGGTTCTGAAGAGGCTTaGTATGAGGTTTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: EIYHNSNATVCPSSIQLVGSEEA*YEVSPI
Trigger: GATGGGAGAAACCTCATATCAAGCCTCTTCAGAACC...TACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTACATTCTATCCATGTTaGGGTTTGGCTGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: AQVAKEIYHNSNATVCPSTFYPC*GLAETV
Trigger: GACTGTTTCAGCCAAACCTCAACATGGATAGAATGT...ACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR TCA 90 bp GTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATCAGACTAGCAGATGTTaGATATGGGACCCATTCTTG +
Preference number: 4 (lower is better)
Translates to: VCPSSIQLVSSIFHCILYQTSRC*IWDPFL
Trigger: CAAGAATGGGTCCCATATTCAACATCTGCTAGTCTG...ATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCCAGACTAGCAGATGTTaGATATGGGACCCATTCTTG +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPQTSRC*IWDPFL
Trigger: CAAGAATGGGTCCCATATTCAACATCTGCTAGTCTG...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCTTGGGCAAAAAGAGATaGGCCGTAATTCCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFLGKKR*AVIPSH
Trigger: ATGGGAGGGAATTACGGCTCATCTCTTTTTGCCCAA...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATATTGGGCAAAAAGAGATaGGCCGTAATTCCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSILGKKR*AVIPSH
Trigger: ATGGGAGGGAATTACGGCTCATCTCTTTTTGCCCAA...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTTGGGCAAAAAGAGATaGGCCGTAATTCCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSLGKKR*AVIPSH
Trigger: ATGGGAGGGAATTACGGCTCATCTCTTTTTGCCCAA...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp TCTTCTTTTGGTGTATCACGAGTTGAATCCTTAATAAATGACTGCCACAAAGAAAGCCACAGGACCTGCTaGCACCCATTATCTACTGCT +
Preference number: 4 (lower is better)
Translates to: SSFGVSRVESLINDCHKESHRTC*HPLSTA
Trigger: AGCAGTAGATAATGGGTGTCAGCAGGTCCTGTGGCT...TTCTTTGTGGCAGTCATTTATTAAGGATTCAACTCGTGATACACCAAAAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAAAGCCACAGGACCTGCTaGCACCCATTATCTACTGCT +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQSHRTC*HPLSTA
Trigger: AGCAGTAGATAATGGGTGTCAGCAGGTCCTGTGGCT...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGTCACTCCTGGAAGAATaGTGCCATCTAGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLSLLEE*CHLVEE
Trigger: CTCCTCCACTAGATGGCATCATTCTTCCAGGAGTGA...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCTTAAATTCACCCCACTaGTGTGCCAGGTCCAGAATG +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFLNSPH*CARSRM
Trigger: CATTCTGGACCTGGCACATCAGTGGGGTGAATTTAA...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCGGTGAGGTATCTCTCTaGCACCTTAAATTCACCCCA +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFGEVSL*HLKFTP
Trigger: TGGGGTGAATTTAAGGTGTCAGAGAGATACCTCACC...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTAGGTGAGGTATCTCTCTaGCACCTTAAATTCACCCCA +
Preference number: 4 (lower is better)
Translates to: EIYHNSNATVCPSSIQLVGEVSL*HLKFTP
Trigger: TGGGGTGAATTTAAGGTGTCAGAGAGATACCTCACC...TACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCAAGTCATCCATGGTaGGGTATCTCTCTGACACCT +
Preference number: 4 (lower is better)
Translates to: EIYHNSNATVCPSSIQLVSSHPW*GISLTP
Trigger: AGGTGTCAGAGAGATACCTCACCATGGATGACTTGA...TACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATATCAAGTCATCCATGGTaGGGTATCTCTCTGACACCT +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSISSHPW*GISLTP
Trigger: AGGTGTCAGAGAGATACCTCACCATGGATGACTTGA...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTCAAGTCATCCATGGTaGGGTATCTCTCTGACACCT +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSSSHPW*GISLTP
Trigger: AGGTGTCAGAGAGATACCTCACCATGGATGACTTGA...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGGGATTTGTGCTCCTATaGGAATCTAATGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQGFVLL*ESNAAT
Trigger: AGTGGCAGCATTAGATTCTCATAGGAGCACAAATCC...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCAGAGCACCTCAGGCCTaGAAAGAACAGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSRAPQA*KEQLLP
Trigger: TGGGAGAAGCTGTTCTTTTCAGGCCTGAGGTGCTCT...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGAGCACCTCAGGCCTaGAAAGAACAGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNRAPQA*KEQLLP
Trigger: TGGGAGAAGCTGTTCTTTTCAGGCCTGAGGTGCTCT...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATCTAATCTGGCTTTGCTaGGAAAATCAGCAAGGATGC +
Preference number: 4 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNLIWLC*ENQQGC
Trigger: GCATCCTTGCTGATTTTCTCAGCAAAGCCAGATTAG...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAACATAGCCTGCGGATaGTCTTTCACAAAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPNIACG*SFTKAK
Trigger: CTTGGCTTTTGTGAAAGATCATCCGCAGGCTATGTT...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp GCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTGACCTTTGGAGAGAATaGTCATGGGTTTTGATCAAC +
Preference number: 4 (lower is better)
Translates to: AQVAKEIYHNSNATVCPSDLWRE*SWVLIN
Trigger: GTTGATCAAAACCCATGATCATTCTCTCCAAAGGTC...ACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR GCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCGGAGCATCCGTTACTaGAATCCTTCATTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFRSIRY*NPSLFR
Trigger: ACGGAACAATGAAGGATTGCAGTAACGGATGCTCCG...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000539780.5
CDS-3UTR GCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCGGAGCATCCGTTACTaGAATCCTTCATTGTTCCGT +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSRSIRY*NPSLFR
Trigger: ACGGAACAATGAAGGATTGCAGTAACGGATGCTCCG...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000539780.5
CDS-3UTR GCA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACTTCTCCGGTACACTCTaGGGAGCATCCGTTACTGCA +
Preference number: 4 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNFSGTL*GASVTA
Trigger: TGCAGTAACGGATGCTCCGCAGAGTGTACCGGAGAA...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGAAATACCGGCAGAGTTaGCCTCACAGCAGAGCGATA +
Preference number: 4 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLKYRQS*PHSRAI
Trigger: TATCGCTCTGCTGTGAGGGCAACTCTGCCGGTATTT...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR GCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTAATTCCCTCCCATCTTaGAGTCCCCAGTTCCACCTT +
Preference number: 4 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCNSLPS*SPQFHL
Trigger: AAGGTGGAACTGGGGACTGCAAGATGGGAGGGAATT...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTACACCCATTATCTACTaGTTCACATTGGGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: LLNKENITHSSSPCILTTTPIIY*FTLGKK
Trigger: CTTTTTGCCCAATGTGAAGCAGTAGATAATGGGTGT...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCAAAGCTGGTACCCTTTaGCTCCTTTTGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSKAGTL*LLLWGD
Trigger: ATCTCCCCACAAAAGGAGGCAAAGGGTACCAGCTTT...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CCA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTAGCTACAACATAATGTaGAAAGGACAATGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLNKENITHSSSPCILTTSYNIM*KGQWWE
Trigger: TTCCCACCATTGTCCTTTCCACATTATGTTGTAGCT...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCGATGAAGCTCCTCAATaGCCCACCACTCACCTCTTC +
Preference number: 4 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSDEAPQ*PTTHLF
Trigger: GAAGAGGTGAGTGGTGGGCCATTGAGGAGCTTCATC...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCACTGCAAGGCCTGGTTTaGCTAAAAGGGACACTTCAT +
Preference number: 4 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPLQGLV*LKGTLH
Trigger: ATGAAGTGTCCCTTTTAGCCAAACCAGGCCTTGCAG...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCTCAGCATATGATCCGTaGACACAGTTCCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPSAYDP*TQFQKP
Trigger: TGGTTTTTGGAACTGTGTTCACGGATCATATGCTGA...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp TCTTCTTTTGGTGTATCACGAGTTGAATCCTTAATAAATGACTGCCACAAAGAATCCACCGTCAGCATATaGTCCGTGAACACAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SSFGVSRVESLINDCHKESTVSI*SVNTVP
Trigger: TGGAACTGTGTTCACGGATCATATGCTGACGGTGGA...TTCTTTGTGGCAGTCATTTATTAAGGATTCAACTCGTGATACACCAAAAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp ATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATATGGGACCCATTCTTaGTCCAATTTCACAAGCTGT +
Preference number: 4 (lower is better)
Translates to: ITIQMQQSVPVAYSWYPLYGTHS*SNFTSC
Trigger: ACAGCTTGTGAAATTGGATCAAGAATGGGTCCCATA...TAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCAGACTAGCAGATGTTaGATATGGGACCCATTCTTG +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFQTSRC*IWDPFL
Trigger: CAAGAATGGGTCCCATATTCAACATCTGCTAGTCTG...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCGGTGAGGTATCTCTCTaGCACCTTAAATTCACCCCA +
Preference number: 4 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVGEVSL*HLKFTP
Trigger: TGGGGTGAATTTAAGGTGTCAGAGAGATACCTCACC...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GCTGCTTTCATAGCACAATTCCCCAAAAGCAGAACTGAAACTGTAGCTTTAATAGGATTTGTGCTCCTATaGGAATCTAATGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: AAFIAQFPKSRTETVALIGFVLL*ESNAAT
Trigger: AGTGGCAGCATTAGATTCTCATAGGAGCACAAATCC...TATTAAAGCTACAGTTTCAGTTCTGCTTTTGGGGAATTGTGCTATGAAAGCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTGTTGGTATGATATCATaGCCTCTCTCTAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSVGMIS*PLSRAV
Trigger: CACTGCTCTAGAGAGAGGTCATGATATCATACCAAC...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTCCATTTGGTTGGTATaGTATCATGACCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQSIWLV*YHDLSL
Trigger: TAGAGAGAGGTCATGATATCATACCAACCAAATGGA...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGCCAAAATACAATGTCTaGGAGTTGACCTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQPKYNV*ELTFQG
Trigger: TCCTTGGAAGGTCAACTCTCAGACATTGTATTTTGG...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp ATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTAATAGGTAATGCTCATTaGAAAGCTGGTACCCTTTGC +
Preference number: 4 (lower is better)
Translates to: ITIQMQQSVPVAYSWYPLIGNAH*KAGTLC
Trigger: GCAAAGGGTACCAGCTTTTCAATGAGCATTACCTAT...TAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATACACACTTTCTACCCTaGAGGAAACTGCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNTHFLP*RKLLSY
Trigger: ATAAGACAGCAGTTTCCTTCAGGGTAGAAAGTGTGT...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR GCA 90 bp ACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTAAATACCGGCAGAGTTaGCCTCACAGCAGAGCGATA +
Preference number: 4 (lower is better)
Translates to: TTLCTGSQRNLSQFKCNSKYRQS*PHSRAI
Trigger: TATCGCTCTGCTGTGAGGGCAACTCTGCCGGTATTT...ACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR GCA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCAATTCCCTCCCATCTTaGAGTCCCCAGTTCCACCTT +
Preference number: 4 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSNSLPS*SPQFHL
Trigger: AAGGTGGAACTGGGGACTGCAAGATGGGAGGGAATT...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp GCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTACACCCATTATCTACTaGTTCACATTGGGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: AQVAKEIYHNSNATVCPSTPIIY*FTLGKK
Trigger: CTTTTTGCCCAATGTGAAGCAGTAGATAATGGGTGT...ACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTAATTTTTCCACAGACTaGAGGGTGAAGGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSNFSTD*RVKGGF
Trigger: GAAACCACCCTTCACCCTGCAGTCTGTGGAAAAATT...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCAATTTTTCCACAGACTaGAGGGTGAAGGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFNFSTD*RVKGGF
Trigger: GAAACCACCCTTCACCCTGCAGTCTGTGGAAAAATT...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCAAATTTTTCCACAGACTaGAGGGTGAAGGGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPNFSTD*RVKGGF
Trigger: GAAACCACCCTTCACCCTGCAGTCTGTGGAAAAATT...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGCATAGTAGCTCTCCCTaGATCCTAACCACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLHSSSP*ILTTCS
Trigger: TGAGCAAGTGGTTAGGATGCAGGGAGAGCTACTATG...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAAAGGCTCTTACATACTTaGGATTGGCCCACAGGGACA +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQRLLHT*DWPTGT
Trigger: TGTCCCTGTGGGCCAATCCCAAGTATGTAAGAGCCT...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp ATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTACAGTATATCAGAAACTaGGCAAACAACACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ITIQMQQSVPVAYSWYPLQYIRN*ANNTGC
Trigger: ACAGCCTGTGTTGTTTGCCCAGTTTCTGATATACTG...TAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp GCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCTACAACATAATGTaGAAAGGACAATGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: AQVAKEIYHNSNATVCPSSYNIM*KGQWWE
Trigger: TTCCCACCATTGTCCTTTCCACATTATGTTGTAGCT...ACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCCAGGGACCAGTTTTGTaGAAGACAATTTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSQGPVL*KTIFPQ
Trigger: CTGTGGAAAAATTGTCTTCCACAAAACTGGTCCCTG...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTCTCTATCCAGTGGTGTaGTTTCTGGTCTTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCLYPVV*FLVFLV
Trigger: CACCAGAAAGACCAGAAACCACACCACTGGATAGAG...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATAAAATGTGTGACCCTTaGGTAATTCTGCACTTGGCT +
Preference number: 4 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNKMCDP*VILHLA
Trigger: AGCCAAGTGCAGAATTACCCAAGGGTCACACATTTT...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp GAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCAGCATATGATCCGTaGACACAGTTCCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: EIYHNSNATVCPSSIQLVSAYDP*TQFQKP
Trigger: TGGTTTTTGGAACTGTGTTCACGGATCATATGCTGA...TACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTATCAGCATATGATCCGTaGACACAGTTCCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLSAYDP*TQFQKP
Trigger: TGGTTTTTGGAACTGTGTTCACGGATCATATGCTGA...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATATCAGCATATGATCCGTaGACACAGTTCCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSISAYDP*TQFQKP
Trigger: TGGTTTTTGGAACTGTGTTCACGGATCATATGCTGA...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAAGGTTCTGAAGAGGCTTaGTATGAGGTTTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQGSEEA*YEVSPI
Trigger: GATGGGAGAAACCTCATATCAAGCCTCTTCAGAACC...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTAACATTCTATCCATGTTaGGGTTTGGCTGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: EIYHNSNATVCPSSIQLVTFYPC*GLAETV
Trigger: GACTGTTTCAGCCAAACCTCAACATGGATAGAATGT...TACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR TCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTACATTCTATCCATGTTaGGGTTTGGCTGAAACAGTC +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSTFYPC*GLAETV
Trigger: GACTGTTTCAGCCAAACCTCAACATGGATAGAATGT...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR TCA 90 bp GCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAATTTCACAAGCTGTTaGATACACTCTAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: AQVAKEIYHNSNATVCPSNFTSC*IHSKSS
Trigger: AGAGCTCTTAGAGTGTATTCAACAGCTTGTGAAATT...ACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATATATGGGACCCATTCTTaGTCCAATTTCACAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSIYGTHS*SNFTSC
Trigger: ACAGCTTGTGAAATTGGATCAAGAATGGGTCCCATA...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCTATGGGACCCATTCTTaGTCCAATTTCACAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSYGTHS*SNFTSC
Trigger: ACAGCTTGTGAAATTGGATCAAGAATGGGTCCCATA...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCATATGGGACCCATTCTTaGTCCAATTTCACAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPYGTHS*SNFTSC
Trigger: ACAGCTTGTGAAATTGGATCAAGAATGGGTCCCATA...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCCAGACTAGCAGATGTTaGATATGGGACCCATTCTTG +
Preference number: 4 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVQTSRC*IWDPFL
Trigger: CAAGAATGGGTCCCATATTCAACATCTGCTAGTCTG...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACTCAAGTCATCCATGGTaGGGTATCTCTCTGACACCT +
Preference number: 4 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNSSHPW*GISLTP
Trigger: AGGTGTCAGAGAGATACCTCACCATGGATGACTTGA...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCTATTTAGTATCTGAGTaGAGTACAAAAGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCIYLVSE*STKGGT
Trigger: AGTGCCTCCTTTTGTACTTCACTCAGATACTAAATA...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
CDS-3UTR TCA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTATTTAGTATCTGAGTaGAGTACAAAAGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQYLVSE*STKGGT
Trigger: AGTGCCTCCTTTTGTACTTCACTCAGATACTAAATA...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
CDS-3UTR TCA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGCTACTATTTAGTATCTaGGTGAAGTACAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQLLFSI*VKYKRR
Trigger: CCTCCTTTTGTACTTCACTCAGATACTAAATAGTAG...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
CDS-3UTR TCA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCGTTGGTATGATATCATaGCCTCTCTCTAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVVGMIS*PLSRAV
Trigger: CACTGCTCTAGAGAGAGGTCATGATATCATACCAAC...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTGTTGGTATGATATCATaGCCTCTCTCTAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCVGMIS*PLSRAV
Trigger: CACTGCTCTAGAGAGAGGTCATGATATCATACCAAC...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCTCCATTTGGTTGGTATaGTATCATGACCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSSIWLV*YHDLSL
Trigger: TAGAGAGAGGTCATGATATCATACCAACCAAATGGA...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCACAATGTCTGAGAGTTaGCCTTCCAAGGAAAAATGT +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPTMSES*PSKEKC
Trigger: ACATTTTTCCTTGGAAGGTCAACTCTCAGACATTGT...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTACCAAAATACAATGTCTaGGAGTTGACCTTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLPKYNV*ELTFQG
Trigger: TCCTTGGAAGGTCAACTCTCAGACATTGTATTTTGG...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCGGAAGTTATGAGGACTaGGGGAAACCAAAATACAAT +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPGSYED*GKPKYN
Trigger: ATTGTATTTTGGTTTCCCTCAGTCCTCATAACTTCC...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACATGGAACACATCTCTaGAGTCAACTCTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSIHGTHL*SQLFFW
Trigger: CCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATG...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTCATGGAACACATCTCTaGAGTCAACTCTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSHGTHL*SQLFFW
Trigger: CCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATG...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp TCTTCTTTTGGTGTATCACGAGTTGAATCCTTAATAAATGACTGCCACAAAGAAAAGACTGCTTGGATTTaGGGCAAGCAAGACCACTTG +
Preference number: 4 (lower is better)
Translates to: SSFGVSRVESLINDCHKEKTAWI*GKQDHL
Trigger: CAAGTGGTCTTGCTTGCCTCAAATCCAAGCAGTCTT...TTCTTTGTGGCAGTCATTTATTAAGGATTCAACTCGTGATACACCAAAAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCTATCTGGAAAATAGCTaGACAAACTCTACATGTGGC +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPYLENS*TNSTCG
Trigger: GCCACATGTAGAGTTTGTTCAGCTATTTTCCAGATA...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCGGCCTTCTTTGCTTATaGTCTAACTATTCAGCTATC +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPGLLCL*SNYSAI
Trigger: GATAGCTGAATAGTTAGATCATAAGCAAAGAAGGCC...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGTTAAAAACAGTGGGTTaGGCCCCAGCTCCATGTATT +
Preference number: 4 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLLKTVG*APAPCI
Trigger: AATACATGGAGCTGGGGCTCAACCCACTGTTTTTAA...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR GCA 90 bp ATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTAACACCCATTATCTACTaGTTCACATTGGGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: ITIQMQQSVPVAYSWYPLTPIIY*FTLGKK
Trigger: CTTTTTGCCCAATGTGAAGCAGTAGATAATGGGTGT...TAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCGGATATCAGTTAATTTaGTCAAGATGCGGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSGYQLI*SRCGLP
Trigger: TGGCAAGCCGCATCTTGAGCAAATTAACTGATATCC...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCTGCATCCTAACCACTTaGTCATCAAATCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPCILTT*SSNLHS
Trigger: TGAATGGAGATTTGATGAGCAAGTGGTTAGGATGCA...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTGCATCCTAACCACTTaGTCATCAAATCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQCILTT*SSNLHS
Trigger: TGAATGGAGATTTGATGAGCAAGTGGTTAGGATGCA...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCATAGTAGCTCTCCCTaGATCCTAACCACTTGCTCA +
Preference number: 4 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSHSSSP*ILTTCS
Trigger: TGAGCAAGTGGTTAGGATGCAGGGAGAGCTACTATG...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTGAACTGCTCAGGTTTTaGCTTTGTCTTGACACTTCA +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSELLRF*LCLDTS
Trigger: TGAAGTGTCAAGACAAAGGCAAAACCTGAGCAGTTC...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCGAACTGCTCAGGTTTTaGCTTTGTCTTGACACTTCA +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFELLRF*LCLDTS
Trigger: TGAAGTGTCAAGACAAAGGCAAAACCTGAGCAGTTC...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp GCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTTTGACTAATAACCTTTaGCTAGACCTTCCAAACTCT +
Preference number: 4 (lower is better)
Translates to: AQVAKEIYHNSNATVCPSLTNNL*LDLPNS
Trigger: AGAGTTTGGAAGGTCTAGGCAAAGGTTATTAGTCAA...ACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTATATCAGAAACTaGGCAAACAACACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSQYIRN*ANNTGC
Trigger: ACAGCCTGTGTTGTTTGCCCAGTTTCTGATATACTG...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGCCAGTAGCATACAGTTaGTATCCTCTATTTTCCATT +
Preference number: 4 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQPVAYS*YPLFSI
Trigger: AATGGAAAATAGAGGATACCAACTGTATGCTACTGG...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCACACACCAGATGGCTCTaGTGTAACAAAGCCATTTTA +
Preference number: 4 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPHTRWL*CNKAIL
Trigger: TAAAATGGCTTTGTTACACCAGAGCCATCTGGTGTG...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CCA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGTCTTTCTCACGCTTGTaGGAATTGAGCGTTGACACT +
Preference number: 4 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLSFSRL*ELSVDT
Trigger: AGTGTCAACGCTCAATTCCCACAAGCGTGAGAAAGA...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp ATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTAAATTTCACAAGCTGTTaGATACACTCTAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ITIQMQQSVPVAYSWYPLNFTSC*IHSKSS
Trigger: AGAGCTCTTAGAGTGTATTCAACAGCTTGTGAAATT...TAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTATGGGACCCATTCTTaGTCCAATTTCACAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVYGTHS*SNFTSC
Trigger: ACAGCTTGTGAAATTGGATCAAGAATGGGTCCCATA...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACCAGACTAGCAGATGTTaGATATGGGACCCATTCTTG +
Preference number: 4 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNQTSRC*IWDPFL
Trigger: CAAGAATGGGTCCCATATTCAACATCTGCTAGTCTG...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGCTACTATTTAGTATCTaGGTGAAGTACAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQLLFSI*VKYKRR
Trigger: CCTCCTTTTGTACTTCACTCAGATACTAAATAGTAG...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
CDS-3UTR TCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCTCCATTTGGTTGGTATaGTATCATGACCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFSIWLV*YHDLSL
Trigger: TAGAGAGAGGTCATGATATCATACCAACCAAATGGA...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GCTGCTTTCATAGCACAATTCCCCAAAAGCAGAACTGAAACTGTAGCTTTAATAACAATGTCTGAGAGTTaGCCTTCCAAGGAAAAATGT +
Preference number: 4 (lower is better)
Translates to: AAFIAQFPKSRTETVALITMSES*PSKEKC
Trigger: ACATTTTTCCTTGGAAGGTCAACTCTCAGACATTGT...TATTAAAGCTACAGTTTCAGTTCTGCTTTTGGGGAATTGTGCTATGAAAGCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp GAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTAACAATGTCTGAGAGTTaGCCTTCCAAGGAAAAATGT +
Preference number: 4 (lower is better)
Translates to: EIYHNSNATVCPSSIQLVTMSES*PSKEKC
Trigger: ACATTTTTCCTTGGAAGGTCAACTCTCAGACATTGT...TACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCGCAAGAAGGAAGTTATaGGGACTGAGGGAAACCAAA +
Preference number: 4 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSARRKL*GLRETK
Trigger: TTTGGTTTCCCTCAGTCCTCATAACTTCCTTCTTGC...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTACTGACAAGCTCGGTCTaGAATGTAGAAACTGAAAAA +
Preference number: 4 (lower is better)
Translates to: EIYHNSNATVCPSSIQLVLTSSV*NVETEK
Trigger: TTTTTCAGTTTCTACATTTCAGACCGAGCTTGTCAG...TACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTCATGGAACACATCTCTaGAGTCAACTCTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCHGTHL*SQLFFW
Trigger: CCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATG...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCATAGTGACTGAGCACTaGGTGGGATTGAAGAAAATA +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFIVTEH*VGLKKI
Trigger: TATTTTCTTCAATCCCACTCAGTGCTCAGTCACTAT...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATACAATGCTGATTTCATaGAACCACACAAACAGGATT +
Preference number: 4 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNTMLIS*NHTNRI
Trigger: AATCCTGTTTGTGTGGTTTCATGAAATCAGCATTGT...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTGCATTCAACAATGCTaGTTTCATGAAACCACACAA +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQCIQQC*FHETTQ
Trigger: TTGTGTGGTTTCATGAAATCAGCATTGTTGAATGCA...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTATACATTTACTTCCCTTaGCCAGAAACCTTGAGACAT +
Preference number: 4 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLYIYFP*PETLRH
Trigger: ATGTCTCAAGGTTTCTGGTCAAGGGAAGTAAATGTA...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCAAAGGGACACTTCATTaGAGATCTCTAGGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFKGTLH*RSLGLL
Trigger: TAAAAGGCCTAGAGATCTTCAATGAAGTGTCCCTTT...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR GCA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCAACACCCATTATCTACTaGTTCACATTGGGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPTPIIY*FTLGKK
Trigger: CTTTTTGCCCAATGTGAAGCAGTAGATAATGGGTGT...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCACACCCATTATCTACTaGTTCACATTGGGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFTPIIY*FTLGKK
Trigger: CTTTTTGCCCAATGTGAAGCAGTAGATAATGGGTGT...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTGGATATCAGTTAATTTaGTCAAGATGCGGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCGYQLI*SRCGLP
Trigger: TGGCAAGCCGCATCTTGAGCAAATTAACTGATATCC...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGGATATCAGTTAATTTaGTCAAGATGCGGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLGYQLI*SRCGLP
Trigger: TGGCAAGCCGCATCTTGAGCAAATTAACTGATATCC...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTACAAACTACATTATaGACAGGTAGCCAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCILQTTL*TGSQRN
Trigger: ATTTCTTTGGCTACCTGTGCATAATGTAGTTTGTAG...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATATGCATCCTAACCACTTaGTCATCAAATCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSICILTT*SSNLHS
Trigger: TGAATGGAGATTTGATGAGCAAGTGGTTAGGATGCA...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGCTATGTGTTGCTAAATaGCTCAAGGAAATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQLCVAK*LKEIFP
Trigger: TGGAAAAATTTCCTTGAGGCATTTAGCAACACATAG...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCATAATGTGGCACTCTTaGTGTATTAATCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPIMWHS*CINPLQ
Trigger: TTGCAGTGGATTAATACAGCAAGAGTGCCACATTAT...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCGAACTGCTCAGGTTTTaGCTTTGTCTTGACACTTCA +
Preference number: 4 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVELLRF*LCLDTS
Trigger: TGAAGTGTCAAGACAAAGGCAAAACCTGAGCAGTTC...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp GTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATAATCTTTTTAGGAACTaGTCAGGTTTTGCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: VCPSSIQLVSSIFHCILYNLFRN*SGFAFV
Trigger: GACAAAGGCAAAACCTGAGCAGTTCCTAAAAAGATT...ATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCAATCTTTTTAGGAACTaGTCAGGTTTTGCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSNLFRN*SGFAFV
Trigger: GACAAAGGCAAAACCTGAGCAGTTCCTAAAAAGATT...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATCCATGTTGAGGTTTaGCTGAAACAGTCGAATTTT +
Preference number: 4 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSIHVEV*LKQSNF
Trigger: AAAATTCGACTGTTTCAGCCAAACCTCAACATGGAT...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR CCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATAAGAAAACACTTTCTGTaGATAAAGATAGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSIRKHFL*IKIGCR
Trigger: CCTGCAGCCTATCTTTATCCACAGAAAGTGTTTTCT...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
CDS-3UTR CCA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTGCCTAGTTATAATGTaGCACTCTTGCTGTATTAAT +
Preference number: 4 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQCLVIM*HSCCIN
Trigger: ATTAATACAGCAAGAGTGCCACATTATAACTAGGCA...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGCTCATTGAAAAGCTaGTACCCTTTGCCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVCSLKS*YPLPPF
Trigger: AAAAGGAGGCAAAGGGTACCAGCTTTTCAATGAGCA...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTATTTTCTGAATAGCTaGATCCATCACCTTCAAGCT +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQYFLNS*IHHLQA
Trigger: AGCTTGAAGGTGATGGATCCAGCTATTCAGAAAATA...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTAATTTCACAAGCTGTTaGATACACTCTAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSNFTSC*IHSKSS
Trigger: AGAGCTCTTAGAGTGTATTCAACAGCTTGTGAAATT...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATAAATTTCACAAGCTGTTaGATACACTCTAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSINFTSC*IHSKSS
Trigger: AGAGCTCTTAGAGTGTATTCAACAGCTTGTGAAATT...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCATATTTAGTATCTGAGTaGAGTACAAAAGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPYLVSE*STKGGT
Trigger: AGTGCCTCCTTTTGTACTTCACTCAGATACTAAATA...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
CDS-3UTR TCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCTATTTAGTATCTGAGTaGAGTACAAAAGGAGGCACT +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSYLVSE*STKGGT
Trigger: AGTGCCTCCTTTTGTACTTCACTCAGATACTAAATA...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
CDS-3UTR TCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCTACTATTTAGTATCTaGGTGAAGTACAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSLLFSI*VKYKRR
Trigger: CCTCCTTTTGTACTTCACTCAGATACTAAATAGTAG...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
CDS-3UTR TCA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCGGAAGTTATGAGGACTaGGGGAAACCAAAATACAAT +
Preference number: 4 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVGSYED*GKPKYN
Trigger: ATTGTATTTTGGTTTCCCTCAGTCCTCATAACTTCC...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTCTGACAAGCTCGGTCTaGAATGTAGAAACTGAAAAA +
Preference number: 4 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCLTSSV*NVETEK
Trigger: TTTTTCAGTTTCTACATTTCAGACCGAGCTTGTCAG...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCATGTTACCATCTAGCTaGTGTTACGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSMLPSS*CYALLS
Trigger: AGAAAGCAGAGCGTAACATCAGCTAGATGGTAACAT...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAATGTCTTCAAGAGAGCTaGCATTGCATGTTACCATCT +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQCLQES*HCMLPS
Trigger: AGATGGTAACATGCAATGTCAGCTCTCTTGAAGACA...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCAAAACCTTCAGAGCATaGGGTAGTTTCCTTTACCTA +
Preference number: 4 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVKTFRA*GSFLYL
Trigger: TAGGTAAAGGAAACTACCTCATGCTCTGAAGGTTTT...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR GCA 90 bp ACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTGGATATCAGTTAATTTaGTCAAGATGCGGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: TTLCTGSQRNLSQFKCNSGYQLI*SRCGLP
Trigger: TGGCAAGCCGCATCTTGAGCAAATTAACTGATATCC...ACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCCTACAAACTACATTATaGACAGGTAGCCAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSLQTTL*TGSQRN
Trigger: ATTTCTTTGGCTACCTGTGCATAATGTAGTTTGTAG...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGCTACAAACTACATTATaGACAGGTAGCCAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQLQTTL*TGSQRN
Trigger: ATTTCTTTGGCTACCTGTGCATAATGTAGTTTGTAG...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATCTATGTGTTGCTAAATaGCTCAAGGAAATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNLCVAK*LKEIFP
Trigger: TGGAAAAATTTCCTTGAGGCATTTAGCAACACATAG...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCCTATGTGTTGCTAAATaGCTCAAGGAAATTTTTCCA +
Preference number: 4 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPLCVAK*LKEIFP
Trigger: TGGAAAAATTTCCTTGAGGCATTTAGCAACACATAG...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCATAATGTGGCACTCTTaGTGTATTAATCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFIMWHS*CINPLQ
Trigger: TTGCAGTGGATTAATACAGCAAGAGTGCCACATTAT...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCATAATGTGGCACTCTTaGTGTATTAATCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSIMWHS*CINPLQ
Trigger: TTGCAGTGGATTAATACAGCAAGAGTGCCACATTAT...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCAGTCTTCATCATCTTTaGCAAGTAATAGGTAATGCT +
Preference number: 4 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSSLHHL*QVIGNA
Trigger: AGCATTACCTATTACTTGGCAAAGATGATGAAGACT...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CCA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCAATCCATGTTGAGGTTTaGCTGAAACAGTCGAATTTT +
Preference number: 4 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPIHVEV*LKQSNF
Trigger: AAAATTCGACTGTTTCAGCCAAACCTCAACATGGAT...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR CCA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACCAGTATATCAGAAACTaGGCAAACAACACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNQYIRN*ANNTGC
Trigger: ACAGCCTGTGTTGTTTGCCCAGTTTCTGATATACTG...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAGTATATCAGAAACTaGGCAAACAACACAGGCTGT +
Preference number: 4 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSQYIRN*ANNTGC
Trigger: ACAGCCTGTGTTGTTTGCCCAGTTTCTGATATACTG...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp ATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATCTTCTCTTCCATACTaGATATCAGTTAATTTGCTC +
Preference number: 4 (lower is better)
Translates to: ITIQMQQSVPVAYSWYPLSSLPY*ISVNLL
Trigger: GAGCAAATTAACTGATATCCAGTATGGAAGAGAAGA...TAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTCCAGTAGCATACAGTTaGTATCCTCTATTTTCCATT +
Preference number: 4 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSPVAYS*YPLFSI
Trigger: AATGGAAAATAGAGGATACCAACTGTATGCTACTGG...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGAGAAAACACTTTCTGTaGATAAAGATAGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLRKHFL*IKIGCR
Trigger: CCTGCAGCCTATCTTTATCCACAGAAAGTGTTTTCT...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
CDS-3UTR CCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAACAGGGACCAGTTTTGTaGAAGACAATTTTTCCACAG +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQQGPVL*KTIFPQ
Trigger: CTGTGGAAAAATTGTCTTCCACAAAACTGGTCCCTG...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCTGCCTAGTTATAATGTaGCACTCTTGCTGTATTAAT +
Preference number: 4 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSCLVIM*HSCCIN
Trigger: ATTAATACAGCAAGAGTGCCACATTATAACTAGGCA...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATAGCAAATAGTCTAGACTaGGGTGTTAAGCCATTTATA +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSIANSLD*GVKPFI
Trigger: TATAAATGGCTTAACACCCCAGTCTAGACTATTTGC...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538118.5
CDS-3UTR TCA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCAATTTCACAAGCTGTTaGATACACTCTAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVNFTSC*IHSKSS
Trigger: AGAGCTCTTAGAGTGTATTCAACAGCTTGTGAAATT...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR TCA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCGGAAGTTATGAGGACTaGGGGAAACCAAAATACAAT +
Preference number: 4 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSGSYED*GKPKYN
Trigger: ATTGTATTTTGGTTTCCCTCAGTCCTCATAACTTCC...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR TCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAACTGACAAGCTCGGTCTaGAATGTAGAAACTGAAAAA +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQLTSSV*NVETEK
Trigger: TTTTTCAGTTTCTACATTTCAGACCGAGCTTGTCAG...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp GAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTACTACAAACTACATTATaGACAGGTAGCCAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: EIYHNSNATVCPSSIQLVLQTTL*TGSQRN
Trigger: ATTTCTTTGGCTACCTGTGCATAATGTAGTTTGTAG...TACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR GCA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGAATCTTTTTAGGAACTaGTCAGGTTTTGCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLNLFRN*SGFAFV
Trigger: GACAAAGGCAAAACCTGAGCAGTTCCTAAAAAGATT...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR GCA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCGATATACTCATTAATTaGCTCCAAGTGTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFDILIN*LQVFKT
Trigger: AGTCTTGAACACTTGGAGGCAATTAATGAGTATATC...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CCA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATATCTTCTCTTCCATACTaGATATCAGTTAATTTGCTC +
Preference number: 4 (lower is better)
Translates to: VAKEIYHNSNATVCPSSISSLPY*ISVNLL
Trigger: GAGCAAATTAACTGATATCCAGTATGGAAGAGAAGA...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAAAGAAAACACTTTCTGTaGATAAAGATAGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQRKHFL*IKIGCR
Trigger: CCTGCAGCCTATCTTTATCCACAGAAAGTGTTTTCT...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
CDS-3UTR CCA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCAGCTACAACATAATGTaGAAAGGACAATGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSSYNIM*KGQWWE
Trigger: TTCCCACCATTGTCCTTTCCACATTATGTTGTAGCT...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTTTGTGGGGAGATATCTaGAAAATAGCTGAACAAACT +
Preference number: 4 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCLWGDI*KIAEQT
Trigger: AGTTTGTTCAGCTATTTTCCAGATATCTCCCCACAA...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAACTACTATTTAGTATCTaGGTGAAGTACAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQLLFSI*VKYKRR
Trigger: CCTCCTTTTGTACTTCACTCAGATACTAAATAGTAG...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
CDS-3UTR TCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAAATGAAAGTTATTTTCTaGATAGCTGGATCCATCACC +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQMKVIF*IAGSIT
Trigger: GGTGATGGATCCAGCTATTCAGAAAATAACTTTCAT...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp ACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTACTTTCTTCCACCTTTaGATCTTTAAAAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: TTLCTGSQRNLSQFKCNSTFFHL*IFKRGL
Trigger: CAAACCCCTTTTAAAGATTCAAAGGTGGAAGAAAGT...ACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR TCA 90 bp TCTTCTTTTGGTGTATCACGAGTTGAATCCTTAATAAATGACTGCCACAAAGAAGAAGATCTCAATGCTTaGCAGAATAAGGAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SSFGVSRVESLINDCHKEEDLNA*QNKEKA
Trigger: AGCTTTTTCCTTATTCTGTCAAGCATTGAGATCTTC...TTCTTTGTGGCAGTCATTTATTAAGGATTCAACTCGTGATACACCAAAAGAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR GCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTCTACAAACTACATTATaGACAGGTAGCCAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCLQTTL*TGSQRN
Trigger: ATTTCTTTGGCTACCTGTGCATAATGTAGTTTGTAG...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTTCTTCTCTTCCATACTaGATATCAGTTAATTTGCTC +
Preference number: 4 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCSSLPY*ISVNLL
Trigger: GAGCAAATTAACTGATATCCAGTATGGAAGAGAAGA...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACCCAGTAGCATACAGTTaGTATCCTCTATTTTCCATT +
Preference number: 4 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNPVAYS*YPLFSI
Trigger: AATGGAAAATAGAGGATACCAACTGTATGCTACTGG...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAAACTATATGTCAGCCATaGGGGATACAAAGATCTATA +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQTICQP*GIQRSI
Trigger: TATAGATCTTTGTATCCCCCATGGCTGACATATAGT...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp TCTTCTTTTGGTGTATCACGAGTTGAATCCTTAATAAATGACTGCCACAAAGAAACTATATGTCAGCCATaGGGGATACAAAGATCTATA +
Preference number: 4 (lower is better)
Translates to: SSFGVSRVESLINDCHKETICQP*GIQRSI
Trigger: TATAGATCTTTGTATCCCCCATGGCTGACATATAGT...TTCTTTGTGGCAGTCATTTATTAAGGATTCAACTCGTGATACACCAAAAGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CCA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCATTATGACAATGAATaGGAAGAGGTAATCTACTCC +
Preference number: 4 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSHYDNE*EEVIYS
Trigger: GGAGTAGATTACCTCTTCCCATTCATTGTCATAATG...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
3UTR CAA 72 bp AATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTaGGTATCCTCTATTTTCCATTGTATCCTCTATTTT +
Preference number: 4 (lower is better)
Translates to: NSNATVCPSSIQ*VSSIFHCILYF
Trigger: AAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp ACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTTCTTCTCTTCCATACTaGATATCAGTTAATTTGCTC +
Preference number: 4 (lower is better)
Translates to: TTLCTGSQRNLSQFKCNSSSLPY*ISVNLL
Trigger: GAGCAAATTAACTGATATCCAGTATGGAAGAGAAGA...ACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CCA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAATCTTCTCTTCCATACTaGATATCAGTTAATTTGCTC +
Preference number: 4 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQSSLPY*ISVNLL
Trigger: GAGCAAATTAACTGATATCCAGTATGGAAGAGAAGA...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS GCA 90 bp CTGGCCGTGTGGACCGGGTCTGCGGCTGCAGAGCGCGGTCCCGGCTaGAGCAAGACCTGGGGCAGTGCCCGAGGCGGCGGCGAGTACACG +
Preference number: 5 (lower is better)
Translates to: LAVWTGSAAAERGPG*SKTWGSARGGGEYT
Trigger: CGTGTACTCGCCGCCGCCTCGGGCACTGCCCCAGGTCTTGCTGCAGCCGGGACCGCGCTCTGCAGCCGCAGACCCGGTCCACACGGCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000342945.9
CDS GCA 90 bp CTCCAACAAGCGTGTCTTGGGAGCGCTGCCCTGCACTTCCCACCCTaGCGGGGTCGCGGCGGTTTTTGTCCTCCTCCGCCGGCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: LQQACLGSAALHFPP*RGRGGFCPPPPAQG
Trigger: TCCCTGAGCCGGCGGAGGAGGACAAAAACCGCCGCGACCCCGGCAGGGTGGGAAGTGCAGGGCAGCGCTCCCAAGACACGCTTGTTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538118.5
ENST00000544418.1
CDS GCA 90 bp ACCCAGGCCCGAACCTCCAACAAGCGTGTCTTGGGAGCGCTGCCCTaGACTTCCCACCCTGCCGGGGTCGCGGCGGTTTTTGTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: TQARTSNKRVLGALP*TSHPAGVAAVFVLL
Trigger: GAGGAGGACAAAAACCGCCGCGACCCCGGCAGGGTGGGAAGTGCAGGGCAGCGCTCCCAAGACACGCTTGTTGGAGGTTCGGGCCTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538118.5
ENST00000544418.1
CDS GCA 90 bp CAAGCACCCAGGCCCGAACCTCCAACAAGCGTGTCTTGGGAGCGCTaGCCTGCACTTCCCACCCTGCCGGGGTCGCGGCGGTTTTTGTCC +
Preference number: 5 (lower is better)
Translates to: QAPRPEPPTSVSWER*PALPTLPGSRRFLS
Trigger: GGACAAAAACCGCCGCGACCCCGGCAGGGTGGGAAGTGCAGGGCAGCGCTCCCAAGACACGCTTGTTGGAGGTTCGGGCCTGGGTGCTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538118.5
ENST00000544418.1
CDS CCA 90 bp GGGGTCGCGGCGGTTTTTGTCCTCCTCCGCCGGCTCAGGGAAGACTaGTTAAATTCCAGGTCAGCCCTACAGAGCCAGGGTTCGCCGGCA +
Preference number: 5 (lower is better)
Translates to: GVAAVFVLLRRLRED*LNSRSALQSQGSPA
Trigger: TGCCGGCGAACCCTGGCTCTGTAGGGCTGACCTGGAATTTAACCAGTCTTCCCTGAGCCGGCGGAGGAGGACAAAAACCGCCGCGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538118.5
ENST00000544418.1
CDS TCA 90 bp CACAGACGCACAATAGCAAGCCTGCAAAGGGAACGGGGACGGGCGTaGACCATTTCCTCCACCAGCAGGGTCCTCCGATGCCGCAGCATC +
Preference number: 5 (lower is better)
Translates to: HRRTIASLQRERGRA*TISSTSRVLRCRSI
Trigger: GATGCTGCGGCATCGGAGGACCCTGCTGGTGGAGGAAATGGTTCACGCCCGTCCCCGTTCCCTTTGCAGGCTTGCTATTGTGCGTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544418.1
CDS TCA 90 bp GCAAAGCTGATGAGCCAGGGTGCAATGACAGGTTCTGAAGAGGCTTaGTATGAGGTTTCTCCCATCCAAACTCTGAGGACCACTCCACCG +
Preference number: 5 (lower is better)
Translates to: AKLMSQGAMTGSEEA*YEVSPIQTLRTTPP
Trigger: CGGTGGAGTGGTCCTCAGAGTTTGGATGGGAGAAACCTCATATCAAGCCTCTTCAGAACCTGTCATTGCACCCTGGCTCATCAGCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000546285.1
CDS-3UTR CAA 90 bp CCATGGGGGATACAAAGATCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCCAGGCTCTTACATACTaGGGATTGGCCCACAGGGAC +
Preference number: 5 (lower is better)
Translates to: PWGIQRSIRHKTLSLVVAQALTY*GLAHRD
Trigger: GTCCCTGTGGGCCAATCCCAAGTATGTAAGAGCCTG...GGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGATCTTTGTATCCCCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS TCA 90 bp GATGTGCCAGGTCCAGAATGCACCGCCTTGTCACTCCTGGAAGAATaGTGCCATCTAGTGGAGGAGTTGCCAGTTCTTCTTCTCCATCTT +
Preference number: 5 (lower is better)
Translates to: DVPGPECTALSLLEE*CHLVEELPVLLLHL
Trigger: AAGATGGAGAAGAAGAACTGGCAACTCCTCCACTAGATGGCATCATTCTTCCAGGAGTGACAAGGCGGTGCATTCTGGACCTGGCACATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000612790.1
CDS TCA 90 bp CAGGTTCTGAAGAGGCTTGATATGAGGTTTCTCCCATCCAAACTCTaGGGACCACTCCACCGTCAGCATATGATCCGTGAACACAGTTCC +
Preference number: 5 (lower is better)
Translates to: QVLKRLDMRFLPSKL*GPLHRQHMIREHSS
Trigger: GGAACTGTGTTCACGGATCATATGCTGACGGTGGAGTGGTCCTCAGAGTTTGGATGGGAGAAACCTCATATCAAGCCTCTTCAGAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000546285.1
CDS-3UTR CAA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGGGTCGCGGCGGTTTTaGTCCTCCTCCGCCGGCTCA +
Preference number: 5 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLGSRRF*SSSAGS
Trigger: TGAGCCGGCGGAGGAGGACAAAAACCGCCGCGACCC...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538118.5
CDS-3UTR CAA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCTCCAACAAGCGTGTCTaGGGAGCGCTGCCCTGCACT +
Preference number: 5 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCISNKRV*GALPCT
Trigger: AGTGCAGGGCAGCGCTCCCAAGACACGCTTGTTGGA...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538118.5
CDS TCA 90 bp GGTTTCTCCCATCCAAACTCTGAGGACCACTCCACCGTCAGCATATaGTCCGTGAACACAGTTCCAAAAACCAGATTATTGGGGTCTGGT +
Preference number: 5 (lower is better)
Translates to: GFSHPNSEDHSTVSI*SVNTVPKTRLLGSG
Trigger: ACCAGACCCCAATAATCTGGTTTTTGGAACTGTGTTCACGGATCATATGCTGACGGTGGAGTGGTCCTCAGAGTTTGGATGGGAGAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000546285.1
CDS TCA 90 bp ATTTCAGGCTTACAAAAGTTGTTCATATCAAAGGCACCCACCCACTaGTGTGCCAGGTCCAGAATGCACCGCCTTGTCACTCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: ISGLQKLFISKAPTH*CARSRMHRLVTPGR
Trigger: TCTTCCAGGAGTGACAAGGCGGTGCATTCTGGACCTGGCACATCAGTGGGTGGGTGCCTTTGATATGAACAACTTTTGTAAGCCTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612790.1
CDS GCA 90 bp AGGCTTACAAAAGTTGTTCATATCAAAGGCACCCACCCACTGATGTaGCAGGTCCAGAATGCACCGCCTTGTCACTCCTGGAAGAATGAT +
Preference number: 5 (lower is better)
Translates to: RLTKVVHIKGTHPLM*QVQNAPPCHSWKND
Trigger: ATCATTCTTCCAGGAGTGACAAGGCGGTGCATTCTGGACCTGGCACATCAGTGGGTGGGTGCCTTTGATATGAACAACTTTTGTAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612790.1
CDS-3UTR CAA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCTCCCCACCACCTCTTTaGATCCTCCTTCTCCGGTAC +
Preference number: 5 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCISPPPL*ILLLRY
Trigger: GTACCGGAGAAGGAGGATCAAAAGAGGTGGTGGGGA...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp CCATGGGGGATACAAAGATCTATAAGGCACAAGACCCTCAGTCTTGTAGTCGCCTGGATATCAGTTAATTaGCTCAAGATGCGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: PWGIQRSIRHKTLSLVVAWISVN*LKMRLA
Trigger: GGCAAGCCGCATCTTGAGCAAATTAACTGATATCCA...GGCGACTACAAGACTGAGGGTCTTGTGCCTTATAGATCTTTGTATCCCCCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp ATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATACTGCAATCCTTCATaGTTCCGTCGGCCACGAGGG +
Preference number: 5 (lower is better)
Translates to: ITIQMQQSVPVAYSWYPLYCNPS*FRRPRG
Trigger: CCCTCGTGGCCGACGGAACAATGAAGGATTGCAGTA...TAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000539780.5
CDS-3UTR CAA 90 bp GTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATCAGGCTCTTACATACTaGGGATTGGCCCACAGGGAC +
Preference number: 5 (lower is better)
Translates to: VCPSSIQLVSSIFHCILYQALTY*GLAHRD
Trigger: GTCCCTGTGGGCCAATCCCAAGTATGTAAGAGCCTG...ATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCCAGGCTCTTACATACTaGGGATTGGCCCACAGGGAC +
Preference number: 5 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSQALTY*GLAHRD
Trigger: GTCCCTGTGGGCCAATCCCAAGTATGTAAGAGCCTG...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp GTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATCACACCCTTAGAATGTaGCTCGGGGTACACAGTGCG +
Preference number: 5 (lower is better)
Translates to: VCPSSIQLVSSIFHCILYHTLRM*LGVHSA
Trigger: CGCACTGTGTACCCCGAGCAACATTCTAAGGGTGTG...ATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS TCA 90 bp CCGGCAGAGTTGCCCTCACAGCAGAGCGATACATTCTATCCATGTTaGGGTTTGGCTGAAACAGTCGAATTTTATTATCTACTCCTCGAA +
Preference number: 5 (lower is better)
Translates to: PAELPSQQSDTFYPC*GLAETVEFYYLLLE
Trigger: TTCGAGGAGTAGATAATAAAATTCGACTGTTTCAGCCAAACCTCAACATGGATAGAATGTATCGCTCTGCTGTGAGGGCAACTCTGCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
ENST00000544418.1
ENST00000546285.1
ENST00000612790.1
CDS-3UTR CAA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCATCCCCACCACCTCTTTaGATCCTCCTTCTCCGGTAC +
Preference number: 5 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPSPPPL*ILLLRY
Trigger: GTACCGGAGAAGGAGGATCAAAAGAGGTGGTGGGGA...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCAAATACCGGCAGAGTaGCCCTCACAGCAGAGCGAT +
Preference number: 5 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFQIPAE*PSQQSD
Trigger: ATCGCTCTGCTGTGAGGGCAACTCTGCCGGTATTTG...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR CAA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGACAAAGAGCAGGGCTTaGGTAGGCTTCTTGACTCCA +
Preference number: 5 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQTKSRA*VGFLTP
Trigger: TGGAGTCAAGAAGCCTACCAAAGCCCTGCTCTTTGT...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp GAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTACAGGCTCTTACATACTaGGGATTGGCCCACAGGGAC +
Preference number: 5 (lower is better)
Translates to: EIYHNSNATVCPSSIQLVQALTY*GLAHRD
Trigger: GTCCCTGTGGGCCAATCCCAAGTATGTAAGAGCCTG...TACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTCACACCCTTAGAATGTaGCTCGGGGTACACAGTGCG +
Preference number: 5 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSHTLRM*LGVHSA
Trigger: CGCACTGTGTACCCCGAGCAACATTCTAAGGGTGTG...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS CCA 90 bp AGTTGGAATGTGTATTGTCTCGCCTTTGTACAGTATATCAGAAACTaGGCAAACAACACAGGCTGTACCAGAGCCAAACATCTCTCTCAC +
Preference number: 5 (lower is better)
Translates to: SWNVYCLAFVQYIRN*ANNTGCTRAKHLSH
Trigger: GTGAGAGAGATGTTTGGCTCTGGTACAGCCTGTGTTGTTTGCCCAGTTTCTGATATACTGTACAAAGGCGAGACAATACACATTCCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCGCTTTGGTAGGCTTCTaGACTCCAAGAGAAGGCTCA +
Preference number: 5 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPALVGF*TPREGS
Trigger: TGAGCCTTCTCTTGGAGTCAAGAAGCCTACCAAAGC...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp GTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATGCTTTGGTAGGCTTCTaGACTCCAAGAGAAGGCTCA +
Preference number: 5 (lower is better)
Translates to: VCPSSIQLVSSIFHCILYALVGF*TPREGS
Trigger: TGAGCCTTCTCTTGGAGTCAAGAAGCCTACCAAAGC...ATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGACAAAGAGCAGGGCTTaGGTAGGCTTCTTGACTCCA +
Preference number: 5 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQTKSRA*VGFLTP
Trigger: TGGAGTCAAGAAGCCTACCAAAGCCCTGCTCTTTGT...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCCACACCCTTAGAATGTaGCTCGGGGTACACAGTGCG +
Preference number: 5 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVHTLRM*LGVHSA
Trigger: CGCACTGTGTACCCCGAGCAACATTCTAAGGGTGTG...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp GCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTACCCTTTGCCTCCTTTaGTGGGGAGATATCTGGAAA +
Preference number: 5 (lower is better)
Translates to: AQVAKEIYHNSNATVCPSTLCLL*WGDIWK
Trigger: TTTCCAGATATCTCCCCACAAAAGGAGGCAAAGGGT...ACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCTCTGCAAGGCCTGGTTaGGCTAAAAGGGACACTTCA +
Preference number: 5 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSSARPG*AKRDTS
Trigger: TGAAGTGTCCCTTTTAGCCAAACCAGGCCTTGCAGA...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCTGGGTAATTCTGCACTaGGCTTTGTTCTCCCTTGGT +
Preference number: 5 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCIWVILH*ALFSLG
Trigger: ACCAAGGGAGAACAAAGCCAAGTGCAGAATTACCCA...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCCTCTCTTTCTCACGCTaGTGGGAATTGAGCGTTGAC +
Preference number: 5 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSLSFSR*WELSVD
Trigger: GTCAACGCTCAATTCCCACAAGCGTGAGAAAGAGAG...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCTACTGCAATCCTTCATaGTTCCGTCGGCCACGAGGG +
Preference number: 5 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSYCNPS*FRRPRG
Trigger: CCCTCGTGGCCGACGGAACAATGAAGGATTGCAGTA...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000539780.5
CDS-3UTR CAA 90 bp ACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTTCCCCACCACCTCTTTaGATCCTCCTTCTCCGGTAC +
Preference number: 5 (lower is better)
Translates to: TTLCTGSQRNLSQFKCNSSPPPL*ILLLRY
Trigger: GTACCGGAGAAGGAGGATCAAAAGAGGTGGTGGGGA...ACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAAATACCGGCAGAGTaGCCCTCACAGCAGAGCGAT +
Preference number: 5 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSQIPAE*PSQQSD
Trigger: ATCGCTCTGCTGTGAGGGCAACTCTGCCGGTATTTG...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR CAA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTAGCTTTGGTAGGCTTCTaGACTCCAAGAGAAGGCTCA +
Preference number: 5 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLALVGF*TPREGS
Trigger: TGAGCCTTCTCTTGGAGTCAAGAAGCCTACCAAAGC...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTGCTTTGGTAGGCTTCTaGACTCCAAGAGAAGGCTCA +
Preference number: 5 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSALVGF*TPREGS
Trigger: TGAGCCTTCTCTTGGAGTCAAGAAGCCTACCAAAGC...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCTTCAGGATAGCACAATaGTCCAGTCGCTCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSFRIAQ*SSRSLL
Trigger: GAGAAGAGAGCGACTGGACAATTGTGCTATCCTGAA...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTAGACTTCTCAGTCACTaGTTTCTCTTTCCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: LLNKENITHSSSPCILTTRLLSH*FLFPFH
Trigger: GTGAAAGGGAAAGAGAAACAAGTGACTGAGAAGTCT...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp ATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATCACGCTTGTGGGAATaGAGCGTTGACACTGTAAGA +
Preference number: 5 (lower is better)
Translates to: ITIQMQQSVPVAYSWYPLSRLWE*SVDTVR
Trigger: TCTTACAGTGTCAACGCTCAATTCCCACAAGCGTGA...TAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS TCA 90 bp GCCCTCACAGCAGAGCGATACATTCTATCCATGTTGAGGTTTGGCTaGAACAGTCGAATTTTATTATCTACTCCTCGAAATGCCTTCAAT +
Preference number: 5 (lower is better)
Translates to: ALTAERYILSMLRFG*NSRILLSTPRNAFN
Trigger: ATTGAAGGCATTTCGAGGAGTAGATAATAAAATTCGACTGTTTCAGCCAAACCTCAACATGGATAGAATGTATCGCTCTGCTGTGAGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
ENST00000544418.1
ENST00000546285.1
CDS CCA 90 bp AGTTGCCCTCACAGCAGAGCGATACATTCTATCCATGTTGAGGTTTaGCTGAAACAGTCGAATTTTATTATCTACTCCTCGAAATGCCTT +
Preference number: 5 (lower is better)
Translates to: SCPHSRAIHSIHVEV*LKQSNFIIYSSKCL
Trigger: AAGGCATTTCGAGGAGTAGATAATAAAATTCGACTGTTTCAGCCAAACCTCAACATGGATAGAATGTATCGCTCTGCTGTGAGGGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
ENST00000544418.1
ENST00000546285.1
ENST00000612790.1
CDS-3UTR CAA 90 bp GCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTTCTAAGAGCTCTTCTTaGTCAAATACCGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: AQVAKEIYHNSNATVCPSSKSSS*SNTGRV
Trigger: AACTCTGCCGGTATTTGACAAAGAAGAGCTCTTAGA...ACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR CAA 90 bp GCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTATATGGGACCCATTCTaGATCCAATTTCACAAGCTG +
Preference number: 5 (lower is better)
Translates to: AQVAKEIYHNSNATVCPSIWDPF*IQFHKL
Trigger: CAGCTTGTGAAATTGGATCAAGAATGGGTCCCATAT...ACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGCTTTGGTAGGCTTCTaGACTCCAAGAGAAGGCTCA +
Preference number: 5 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLALVGF*TPREGS
Trigger: TGAGCCTTCTCTTGGAGTCAAGAAGCCTACCAAAGC...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp GTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTGGATATCAGTTAATTaGCTCAAGATGCGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: VCPSSIQLVSSIFHCILYWISVN*LKMRLA
Trigger: GGCAAGCCGCATCTTGAGCAAATTAACTGATATCCA...ATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp GCTGCTTTCATAGCACAATTCCCCAAAAGCAGAACTGAAACTGTAGCTTTAATATTCAGGATAGCACAATaGTCCAGTCGCTCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: AAFIAQFPKSRTETVALIFRIAQ*SSRSLL
Trigger: GAGAAGAGAGCGACTGGACAATTGTGCTATCCTGAA...TATTAAAGCTACAGTTTCAGTTCTGCTTTTGGGGAATTGTGCTATGAAAGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp GAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATTCAGGATAGCACAATaGTCCAGTCGCTCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: EIYHNSNATVCPSSIQLVFRIAQ*SSRSLL
Trigger: GAGAAGAGAGCGACTGGACAATTGTGCTATCCTGAA...TACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCATTCAGGATAGCACAATaGTCCAGTCGCTCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPFRIAQ*SSRSLL
Trigger: GAGAAGAGAGCGACTGGACAATTGTGCTATCCTGAA...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGAATGACAATGGTGGATaGTGTTCTCCTTATCAGGAG +
Preference number: 5 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQNDNGG*CSPYQE
Trigger: CTCCTGATAAGGAGAACACAATCCACCATTGTCATT...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp GTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCAAGACTGCTTGGATTaGAGGCAAGCAAGACCACTT +
Preference number: 5 (lower is better)
Translates to: VPVAYSWYPLFSIVSSIFQDCLD*RQARPL
Trigger: AAGTGGTCTTGCTTGCCTCAAATCCAAGCAGTCTTG...GAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp GCATGGAACACATCTCTGAAGTCAACTCTTCTTTTGGTGTATCACGAGTTGAATTCTGCGCGTAACTTCTaGAGAGATCTGAATAAAGGC +
Preference number: 5 (lower is better)
Translates to: AWNTSLKSTLLLVYHELNSARNF*RDLNKG
Trigger: GCCTTTATTCAGATCTCTCAAGAAGTTACGCGCAGA...ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTTCAGAGATGTGTTCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp GCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTCTAAGAGCTCTTCTTaGTCAAATACCGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: AKEIYHNSNATVCPSSIQSKSSS*SNTGRV
Trigger: AACTCTGCCGGTATTTGACAAAGAAGAGCTCTTAGA...CTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR CAA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATATGGGACCCATTCTaGATCCAATTTCACAAGCTG +
Preference number: 5 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSIWDPF*IQFHKL
Trigger: CAGCTTGTGAAATTGGATCAAGAATGGGTCCCATAT...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCATATGGGACCCATTCTaGATCCAATTTCACAAGCTG +
Preference number: 5 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPIWDPF*IQFHKL
Trigger: CAGCTTGTGAAATTGGATCAAGAATGGGTCCCATAT...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp AATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCCAAACAAAGAGCAGGGCTTaGGTAGGCTTCTTGACTCCA +
Preference number: 5 (lower is better)
Translates to: NHSCNTLILQTTLCTGSQTKSRA*VGFLTP
Trigger: TGGAGTCAAGAAGCCTACCAAAGCCCTGCTCTTTGT...TTGGCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACACAAAGAGCAGGGCTTaGGTAGGCTTCTTGACTCCA +
Preference number: 5 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNTKSRA*VGFLTP
Trigger: TGGAGTCAAGAAGCCTACCAAAGCCCTGCTCTTTGT...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp ACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTACAAAGAGCAGGGCTTaGGTAGGCTTCTTGACTCCA +
Preference number: 5 (lower is better)
Translates to: TTLCTGSQRNLSQFKCNSTKSRA*VGFLTP
Trigger: TGGAGTCAAGAAGCCTACCAAAGCCCTGCTCTTTGT...ACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp CCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGATATCAGTTAATTaGCTCAAGATGCGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: PKKSITIQMQQSVPVAYSWISVN*LKMRLA
Trigger: GGCAAGCCGCATCTTGAGCAAATTAACTGATATCCA...ACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp GTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATAGACTTCTCAGTCACTaGTTTCTCTTTCCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: VCPSSIQLVSSIFHCILYRLLSH*FLFPFH
Trigger: GTGAAAGGGAAAGAGAAACAAGTGACTGAGAAGTCT...ATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCTTCTGCCGGCTTACTaGGTACCTCTGATGAATATT +
Preference number: 5 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSLLPAY*VPLMNI
Trigger: AATATTCATCAGAGGTACCAAGTAAGCCGGCAGAAG...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp GAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATGGCTTTGTTCTCCCTaGGTGCTTTTGAGGACAATT +
Preference number: 5 (lower is better)
Translates to: EIYHNSNATVCPSSIQLVWLCSP*VLLRTI
Trigger: AATTGTCCTCAAAAGCACCAAGGGAGAACAAAGCCA...TACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp CTCCTAAACAAGGAAAATATCACCCATAGTAGCTCTCCCTGCATCCTAACCACTGTTTACAGTAACTCTTaGCAAAACTTCAGGTTTTGC +
Preference number: 5 (lower is better)
Translates to: LLNKENITHSSSPCILTTVYSNS*QNFRFC
Trigger: GCAAAACCTGAAGTTTTGCAAAGAGTTACTGTAAAC...AGTGGTTAGGATGCAGGGAGAGCTACTATGGGTGATATTTTCCTTGTTTAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTCTAAGAGCTCTTCTTaGTCAAATACTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQSKSSS*SNTSTA
Trigger: TGCAGTGGAAGTATTTGACAAAGAAGAGCTCTTAGA...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342945.9
ENST00000539780.5
CDS-3UTR CAA 90 bp GCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTTCTAAGAGCTCTTCTTaGTCAAATACTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: AQVAKEIYHNSNATVCPSSKSSS*SNTSTA
Trigger: TGCAGTGGAAGTATTTGACAAAGAAGAGCTCTTAGA...ACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342945.9
ENST00000539780.5
CDS-3UTR CAA 90 bp GCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCTGTATTGTCTCGCCTTaGTACAGTATATCAGAAACT +
Preference number: 5 (lower is better)
Translates to: ATVCPSSIQLVSSIFHCICIVSP*YSISET
Trigger: AGTTTCTGATATACTGTACAAAGGCGAGACAATACA...GATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp AGCGTCAAGGTCAATTTCCTGTCTTATTACTTAAATGACAATGGTGGATTGTGTTGGATATCAGTTAATTaGCTCAAGATGCGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: SVKVNFLSYYLNDNGGLCWISVN*LKMRLA
Trigger: GGCAAGCCGCATCTTGAGCAAATTAACTGATATCCA...ACACAATCCACCATTGTCATTTAAGTAATAAGACAGGAAATTGACCTTGACGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp ACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTTTCAGGATAGCACAATaGTCCAGTCGCTCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: TTLCTGSQRNLSQFKCNSFRIAQ*SSRSLL
Trigger: GAGAAGAGAGCGACTGGACAATTGTGCTATCCTGAA...ACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp TTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCCCAGTAGCATACAGTaGGTATCCTCTATTTTCCAT +
Preference number: 5 (lower is better)
Translates to: LCTGSQRNLSQFKCNSLSPSSIQ*VSSIFH
Trigger: ATGGAAAATAGAGGATACCAACTGTATGCTACTGGG...GGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp CCCAGTAGCATACAGTTGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCACCCAGTAGCATACAGTaGGTATCCTCTATTTTCCAT +
Preference number: 5 (lower is better)
Translates to: PSSIQLVSSIFHCILYFPPSSIQ*VSSIFH
Trigger: ATGGAAAATAGAGGATACCAACTGTATGCTACTGGG...TGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACCCAGTAGCATACAGTaGGTATCCTCTATTTTCCAT +
Preference number: 5 (lower is better)
Translates to: VAKEIYHNSNATVCPSSIPSSIQ*VSSIFH
Trigger: ATGGAAAATAGAGGATACCAACTGTATGCTACTGGG...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp TGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGAAGTCAACTCTTCTTTaGGTGTATCACGAGTTGAAT +
Preference number: 5 (lower is better)
Translates to: CTGSQRNLSQFKCNSLSQKSTLL*VYHELN
Trigger: ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTT...CTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTAAGACTTCTCAGTCACTaGTTTCTCTTTCCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLRLLSH*FLFPFH
Trigger: GTGAAAGGGAAAGAGAAACAAGTGACTGAGAAGTCT...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATATTGTGGGATTATTCCTaGTTAAGTCACCCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: VAKEIYHNSNATVCPSSILWDYS*LSHPRK
Trigger: TTTCCTGGGGTGACTTAACAAGGAATAATCCCACAA...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACCTTAAAAACAGTGGGTaGAGCCCCAGCTCCATGTAT +
Preference number: 5 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNLKNSG*SPSSMY
Trigger: ATACATGGAGCTGGGGCTCAACCCACTGTTTTTAAG...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCTCTCCCTTGGTGCTTTaGAGGACAATTTCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSSPLVL*RTISAR
Trigger: CCTTGCAGAAATTGTCCTCAAAAGCACCAAGGGAGA...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp CTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCATTCTGCACTTGGCTTaGTTCTCCCTTGGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: LHYAQVAKEIYHNSNATVILHLA*FSLGAF
Trigger: AAAAGCACCAAGGGAGAACAAAGCCAAGTGCAGAAT...GACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTAATGCGATCCTGCAAGTaGTCACCACTATACATAAAG +
Preference number: 5 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLMRSCK*SPLYIK
Trigger: CTTTATGTATAGTGGTGACAACTTGCAGGATCGCAT...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS TCA 90 bp CTCAGTTCCAATGAATGTAGGACGAATATACAGACTAGCAGATGTTaGATATGGGACCCATTCTTGATCCAATTTCACAAGCTGTTGAAT +
Preference number: 5 (lower is better)
Translates to: LSSNECRTNIQTSRC*IWDPFLIQFHKLLN
Trigger: ATTCAACAGCTTGTGAAATTGGATCAAGAATGGGTCCCATATTCAACATCTGCTAGTCTGTATATTCGTCCTACATTCATTGGAACTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000612790.1
CDS-3UTR CAA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGTCTAAGAGCTCTTCTTaGTCAAATACCGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLSKSSS*SNTGRV
Trigger: AACTCTGCCGGTATTTGACAAAGAAGAGCTCTTAGA...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
CDS-3UTR CAA 90 bp TATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCTGTATTGTCTCGCCTTaGTACAGTATATCAGAAACT +
Preference number: 5 (lower is better)
Translates to: YAQVAKEIYHNSNATVCPCIVSP*YSISET
Trigger: AGTTTCTGATATACTGTACAAAGGCGAGACAATACA...GGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACTGGATATCAGTTAATTaGCTCAAGATGCGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNWISVN*LKMRLA
Trigger: GGCAAGCCGCATCTTGAGCAAATTAACTGATATCCA...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTGTTCAAGACTGCTaGGATTTGAGGCAAGCAAGA +
Preference number: 5 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNSVQDC*DLRQAR
Trigger: TCTTGCTTGCCTCAAATCCAAGCAGTCTTGAACACT...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp ATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGGTATCCTCTATTTTCCCTCAAGTTATACGTCTaGTTGATTGGGTCTATTGTA +
Preference number: 5 (lower is better)
Translates to: IQMQQSVPVAYSWYPLFSLKLYV*LIGSIV
Trigger: TACAATAGACCCAATCAACAAGACGTATAACTTGAG...GGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACCAATATTTTCACAGGTaGACAGGGTCTGGAGAAGTG +
Preference number: 5 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNQYFHR*TGSGEV
Trigger: CACTTCTCCAGACCCTGTCAACCTGTGAAAATATTG...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp AACAATCACTCTTGTAACACATTGATACTACAAACTACATTATGCACAGGTAGCATATGGGACCCATTCTaGATCCAATTTCACAAGCTG +
Preference number: 5 (lower is better)
Translates to: NNHSCNTLILQTTLCTGSIWDPF*IQFHKL
Trigger: CAGCTTGTGAAATTGGATCAAGAATGGGTCCCATAT...GCTACCTGTGCATAATGTAGTTTGTAGTATCAATGTGTTACAAGAGTGATTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp ACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTATATGGGACCCATTCTaGATCCAATTTCACAAGCTG +
Preference number: 5 (lower is better)
Translates to: TTLCTGSQRNLSQFKCNSIWDPF*IQFHKL
Trigger: CAGCTTGTGAAATTGGATCAAGAATGGGTCCCATAT...ACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp GTAGCCAAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATATGTATTGTCTCGCCTTaGTACAGTATATCAGAAACT +
Preference number: 5 (lower is better)
Translates to: VAKEIYHNSNATVCPSSICIVSP*YSISET
Trigger: AGTTTCTGATATACTGTACAAAGGCGAGACAATACA...TATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTTGGCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTATGTATTGTCTCGCCTTaGTACAGTATATCAGAAACT +
Preference number: 5 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLCIVSP*YSISET
Trigger: AGTTTCTGATATACTGTACAAAGGCGAGACAATACA...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACCCCAGTAGCATACAGTaGGTATCCTCTATTTTCCAT +
Preference number: 5 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNPSSIQ*VSSIFH
Trigger: ATGGAAAATAGAGGATACCAACTGTATGCTACTGGG...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS-3UTR CAA 90 bp TCTTCTTTTGGTGTATCACGAGTTGAATCCTTAATAAATGACTGCCACAAAGAACCCAGTAGCATACAGTaGGTATCCTCTATTTTCCAT +
Preference number: 5 (lower is better)
Translates to: SSFGVSRVESLINDCHKEPSSIQ*VSSIFH
Trigger: ATGGAAAATAGAGGATACCAACTGTATGCTACTGGG...TTCTTTGTGGCAGTCATTTATTAAGGATTCAACTCGTGATACACCAAAAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAATGACAATGGTGGATaGTGTTCTCCTTATCAGGAG +
Preference number: 5 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNNDNGG*CSPYQE
Trigger: CTCCTGATAAGGAGAACACAATCCACCATTGTCATT...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTAAAGTCAACTCTTCTTTaGGTGTATCACGAGTTGAAT +
Preference number: 5 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLKSTLL*VYHELN
Trigger: ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTT...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp GTGGATTGTGTTCTCCTTATCAGGAGACCTCCAGTTTTTAAACATCTATCCTTAATAAATGAGCTTATTTaGGCAGCTGCTTTCATAGCA +
Preference number: 5 (lower is better)
Translates to: VDCVLLIRRPPVFKHLSLINELI*AAAFIA
Trigger: TGCTATGAAAGCAGCTGCCAAAATAAGCTCATTTAT...TAAGGATAGATGTTTAAAAACTGGAGGTCTCCTGATAAGGAGAACACAATCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS-3UTR CAA 90 bp AAAGAAATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTTGAAGTCAACTCTTCTTTaGGTGTATCACGAGTTGAAT +
Preference number: 5 (lower is better)
Translates to: KEIYHNSNATVCPSSIQLKSTLL*VYHELN
Trigger: ATTCAACTCGTGATACACCAAAAGAAGAGTTGACTT...CAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGATTTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
CDS-3UTR CAA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACAAAAGGGACACTTCATaGAAGATCTCTAGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNKRDTS*KISRPF
Trigger: AAAAGGCCTAGAGATCTTCAATGAAGTGTCCCTTTT...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261192.12
CDS GCA 90 bp GGTATAACCTCATTGACTTCTGCCAAAGTGTTTGAATATATTCTTTaGTCAAGGATAGGAAATGGGAAAAAGATCCTTTTAAGCTATGTG +
Preference number: 5 (lower is better)
Translates to: GITSLTSAKVFEYIL*SRIGNGKKILLSYV
Trigger: CACATAGCTTAAAAGGATCTTTTTCCCATTTCCTATCCTTGAGCAAAGAATATATTCAAACACTTTGGCAGAAGTCAATGAGGTTATACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544418.1
CDS-3UTR CAA 90 bp CAAACTACATTATGCACAGGTAGCCAAAGAAATCTATCACAATTCAAATGCAACTGTATTGTCTCGCCTTaGTACAGTATATCAGAAACT +
Preference number: 5 (lower is better)
Translates to: QTTLCTGSQRNLSQFKCNCIVSP*YSISET
Trigger: AGTTTCTGATATACTGTACAAAGGCGAGACAATACA...GTTGCATTTGAATTGTGATAGATTTCTTTGGCTACCTGTGCATAATGTAGTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS GCA 72 bp TGGACCGGGTCTGCGGCTGCAGAGCGCGGTCCCGGCTaGAGCAAGACCTGGGGCAGTGCCCGAGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: WTGSAAAERGPG*SKTWGSARGGG
Trigger: GCCGCCGCCTCGGGCACTGCCCCAGGTCTTGCTGCAGCCGGGACCGCGCTCTGCAGCCGCAGACCCGGTCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261192.12
ENST00000342945.9
CDS GCA 72 bp GCGTGTCTTGGGAGCGCTGCCCTGCACTTCCCACCCTaGCGGGGTCGCGGCGGTTTTTGTCCTCCTCCGCCG +
Preference number: 6 (lower is better)
Translates to: ACLGSAALHFPP*RGRGGFCPPPP
Trigger: CGGCGGAGGAGGACAAAAACCGCCGCGACCCCGGCAGGGTGGGAAGTGCAGGGCAGCGCTCCCAAGACACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538118.5
ENST00000544418.1
CDS GCA 72 bp AGGCCCGAACCTCCAACAAGCGTGTCTTGGGAGCGCTaGCCTGCACTTCCCACCCTGCCGGGGTCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: RPEPPTSVSWER*PALPTLPGSRR
Trigger: CCGCCGCGACCCCGGCAGGGTGGGAAGTGCAGGGCAGCGCTCCCAAGACACGCTTGTTGGAGGTTCGGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538118.5
ENST00000544418.1
CDS CAA 90 bp CTCAGACAACCAAGCACCCAGGCCCGAACCTCCAACAAGCGTGTCTaGGGAGCGCTGCCCTGCACTTCCCACCCTGCCGGGGTCGCGGCG +
Preference number: 6 (lower is better)
Translates to: LRQPSTQARTSNKRV*GALPCTSHPAGVAA
Trigger: CGCCGCGACCCCGGCAGGGTGGGAAGTGCAGGGCAGCGCTCCCAAGACACGCTTGTTGGAGGTTCGGGCCTGGGTGCTTGGTTGTCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538118.5
ENST00000544418.1
CDS CAA 72 bp CCAAGCACCCAGGCCCGAACCTCCAACAAGCGTGTCTaGGGAGCGCTGCCCTGCACTTCCCACCCTGCCGGG +
Preference number: 6 (lower is better)
Translates to: PSTQARTSNKRV*GALPCTSHPAG
Trigger: CCCGGCAGGGTGGGAAGTGCAGGGCAGCGCTCCCAAGACACGCTTGTTGGAGGTTCGGGCCTGGGTGCTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538118.5
ENST00000544418.1
CDS GCA 72 bp CGAACCTCCAACAAGCGTGTCTTGGGAGCGCTGCCCTaGACTTCCCACCCTGCCGGGGTCGCGGCGGTTTTT +
Preference number: 6 (lower is better)
Translates to: RTSNKRVLGALP*TSHPAGVAAVF
Trigger: AAAAACCGCCGCGACCCCGGCAGGGTGGGAAGTGCAGGGCAGCGCTCCCAAGACACGCTTGTTGGAGGTTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538118.5
ENST00000544418.1
CDS TCA 72 bp ACAATAGCAAGCCTGCAAAGGGAACGGGGACGGGCGTaGACCATTTCCTCCACCAGCAGGGTCCTCCGATGC +
Preference number: 6 (lower is better)
Translates to: TIASLQRERGRA*TISSTSRVLRC
Trigger: GCATCGGAGGACCCTGCTGGTGGAGGAAATGGTTCACGCCCGTCCCCGTTCCCTTTGCAGGCTTGCTATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544418.1
CDS CCA 72 bp GCGGTTTTTGTCCTCCTCCGCCGGCTCAGGGAAGACTaGTTAAATTCCAGGTCAGCCCTACAGAGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: AVFVLLRRLRED*LNSRSALQSQG
Trigger: ACCCTGGCTCTGTAGGGCTGACCTGGAATTTAACCAGTCTTCCCTGAGCCGGCGGAGGAGGACAAAAACCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538118.5
ENST00000544418.1
CDS GCA 72 bp AAAGTTGTTCATATCAAAGGCACCCACCCACTGATGTaGCAGGTCCAGAATGCACCGCCTTGTCACTCCTGG +
Preference number: 6 (lower is better)
Translates to: KVVHIKGTHPLM*QVQNAPPCHSW
Trigger: CCAGGAGTGACAAGGCGGTGCATTCTGGACCTGGCACATCAGTGGGTGGGTGCCTTTGATATGAACAACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612790.1
CDS CAA 72 bp GGTCCCACTGGGCTCAAGAGTACAAAGAGCAGGGCTTaGGTAGGCTTCTTGACTCCAAGAGAAGGCTCAGTT +
Preference number: 6 (lower is better)
Translates to: GPTGLKSTKSRA*VGFLTPREGSV
Trigger: AACTGAGCCTTCTCTTGGAGTCAAGAAGCCTACCAAAGCCCTGCTCTTTGTACTCTTGAGCCCAGTGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000612790.1
CDS CAA 90 bp CCCATCTTGCAGTCCCCAGTTCCACCTTTCCAGGCTCTTACATACTaGGGATTGGCCCACAGGGACACTGGATTAAAGGTTCCACTTGAA +
Preference number: 6 (lower is better)
Translates to: PILQSPVPPFQALTY*GLAHRDTGLKVPLE
Trigger: TTCAAGTGGAACCTTTAATCCAGTGTCCCTGTGGGCCAATCCCAAGTATGTAAGAGCCTGGAAAGGTGGAACTGGGGACTGCAAGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000612790.1
CDS TCA 72 bp GGTCCAGAATGCACCGCCTTGTCACTCCTGGAAGAATaGTGCCATCTAGTGGAGGAGTTGCCAGTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: GPECTALSLLEE*CHLVEELPVLL
Trigger: AAGAAGAACTGGCAACTCCTCCACTAGATGGCATCATTCTTCCAGGAGTGACAAGGCGGTGCATTCTGGACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000612790.1
CDS CAA 72 bp CAGTCCCCAGTTCCACCTTTCCAGGCTCTTACATACTaGGGATTGGCCCACAGGGACACTGGATTAAAGGTT +
Preference number: 6 (lower is better)
Translates to: QSPVPPFQALTY*GLAHRDTGLKV
Trigger: AACCTTTAATCCAGTGTCCCTGTGGGCCAATCCCAAGTATGTAAGAGCCTGGAAAGGTGGAACTGGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000612790.1
CDS TCA 72 bp ATGAGCCAGGGTGCAATGACAGGTTCTGAAGAGGCTTaGTATGAGGTTTCTCCCATCCAAACTCTGAGGACC +
Preference number: 6 (lower is better)
Translates to: MSQGAMTGSEEA*YEVSPIQTLRT
Trigger: GGTCCTCAGAGTTTGGATGGGAGAAACCTCATATCAAGCCTCTTCAGAACCTGTCATTGCACCCTGGCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000546285.1
CDS TCA 72 bp GGCTGTTGTCAAGTCATCCATGGTGAGGTATCTCTCTaGCACCTTAAATTCACCCCACTGATGTGCCAGGTC +
Preference number: 6 (lower is better)
Translates to: GCCQVIHGEVSL*HLKFTPLMCQV
Trigger: GACCTGGCACATCAGTGGGGTGAATTTAAGGTGTCAGAGAGATACCTCACCATGGATGACTTGACAACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS TCA 72 bp ACTCTGAGGACCACTCCACCGTCAGCATATGATCCGTaGACACAGTTCCAAAAACCAGATTATTGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: TLRTTPPSAYDP*TQFQKPDYWGL
Trigger: CAGACCCCAATAATCTGGTTTTTGGAACTGTGTTCACGGATCATATGCTGACGGTGGAGTGGTCCTCAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000546285.1
CDS TCA 72 bp AAGAGGCTTGATATGAGGTTTCTCCCATCCAAACTCTaGGGACCACTCCACCGTCAGCATATGATCCGTGAA +
Preference number: 6 (lower is better)
Translates to: KRLDMRFLPSKL*GPLHRQHMIRE
Trigger: TTCACGGATCATATGCTGACGGTGGAGTGGTCCTCAGAGTTTGGATGGGAGAAACCTCATATCAAGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000546285.1
CDS TCA 72 bp CCCATTATCTACTGCTTCACATTGGGCAAAAAGAGATaGGCCGTAATTCCCTCCCATCTTGCAGTCCCCAGT +
Preference number: 6 (lower is better)
Translates to: PIIYCFTLGKKR*AVIPSHLAVPS
Trigger: ACTGGGGACTGCAAGATGGGAGGGAATTACGGCTCATCTCTTTTTGCCCAATGTGAAGCAGTAGATAATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000612790.1
CDS TCA 72 bp TTACAAAAGTTGTTCATATCAAAGGCACCCACCCACTaGTGTGCCAGGTCCAGAATGCACCGCCTTGTCACT +
Preference number: 6 (lower is better)
Translates to: LQKLFISKAPTH*CARSRMHRLVT
Trigger: AGTGACAAGGCGGTGCATTCTGGACCTGGCACATCAGTGGGTGGGTGCCTTTGATATGAACAACTTTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612790.1
CDS CCA 72 bp ATTTATAGAAAAATCTCCAGGGCGCGCTCAGCCTCGTaGTCTTGTCAATCACAGACGCACAATAGCAAGCCT +
Preference number: 6 (lower is better)
Translates to: IYRKISRARSAS*SCQSQTHNSKP
Trigger: AGGCTTGCTATTGTGCGTCTGTGATTGACAAGACCACGAGGCTGAGCGCGCCCTGGAGATTTTTCTATAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544418.1
CDS TCA 72 bp CATCCAAACTCTGAGGACCACTCCACCGTCAGCATATaGTCCGTGAACACAGTTCCAAAAACCAGATTATTG +
Preference number: 6 (lower is better)
Translates to: HPNSEDHSTVSI*SVNTVPKTRLL
Trigger: CAATAATCTGGTTTTTGGAACTGTGTTCACGGATCATATGCTGACGGTGGAGTGGTCCTCAGAGTTTGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000546285.1
CDS CAA 72 bp CTCAAGAGTACAAAGAGCAGGGCTTTGGTAGGCTTCTaGACTCCAAGAGAAGGCTCAGTTCCAATGAATGTA +
Preference number: 6 (lower is better)
Translates to: LKSTKSRALVGF*TPREGSVPMNV
Trigger: TACATTCATTGGAACTGAGCCTTCTCTTGGAGTCAAGAAGCCTACCAAAGCCCTGCTCTTTGTACTCTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000612790.1
CDS CAA 72 bp TCGCTCTCTTCTCTTCCATACTGGATATCAGTTAATTaGCTCAAGATGCGGCTTGCCAGCTTAGGACCATTC +
Preference number: 6 (lower is better)
Translates to: SLSSLPYWISVN*LKMRLASLGPF
Trigger: GAATGGTCCTAAGCTGGCAAGCCGCATCTTGAGCAAATTAACTGATATCCAGTATGGAAGAGAAGAGAGCGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000543099.1
CDS CCA 72 bp GTGTATTGTCTCGCCTTTGTACAGTATATCAGAAACTaGGCAAACAACACAGGCTGTACCAGAGCCAAACAT +
Preference number: 6 (lower is better)
Translates to: VYCLAFVQYIRN*ANNTGCTRAKH
Trigger: ATGTTTGGCTCTGGTACAGCCTGTGTTGTTTGCCCAGTTTCTGATATACTGTACAAAGGCGAGACAATACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
CDS CCA 72 bp CACAGCAGAGCGATACATTCTATCCATGTTGAGGTTTaGCTGAAACAGTCGAATTTTATTATCTACTCCTCG +
Preference number: 6 (lower is better)
Translates to: HSRAIHSIHVEV*LKQSNFIIYSS
Trigger: CGAGGAGTAGATAATAAAATTCGACTGTTTCAGCCAAACCTCAACATGGATAGAATGTATCGCTCTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
ENST00000544418.1
ENST00000546285.1
ENST00000612790.1
CDS TCA 72 bp TTGCCCTCACAGCAGAGCGATACATTCTATCCATGTTaGGGTTTGGCTGAAACAGTCGAATTTTATTATCTA +
Preference number: 6 (lower is better)
Translates to: LPSQQSDTFYPC*GLAETVEFYYL
Trigger: TAGATAATAAAATTCGACTGTTTCAGCCAAACCTCAACATGGATAGAATGTATCGCTCTGCTGTGAGGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
ENST00000544418.1
ENST00000546285.1
ENST00000612790.1
CDS CCA 72 bp AATTGTCTCCCTTATATCCGAGCAAATAGTCTAGACTaGGGTGTTAAGCCATTTATAGAAAAATCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: NCLPYIRANSLD*GVKPFIEKSPG
Trigger: CCCTGGAGATTTTTCTATAAATGGCTTAACACCCCAGTCTAGACTATTTGCTCGGATATAAGGGAGACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538118.5
ENST00000544418.1
CDS TCA 72 bp GCAGAGCGATACATTCTATCCATGTTGAGGTTTGGCTaGAACAGTCGAATTTTATTATCTACTCCTCGAAAT +
Preference number: 6 (lower is better)
Translates to: AERYILSMLRFG*NSRILLSTPRN
Trigger: ATTTCGAGGAGTAGATAATAAAATTCGACTGTTTCAGCCAAACCTCAACATGGATAGAATGTATCGCTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261192.12
ENST00000538118.5
ENST00000539282.5
ENST00000544418.1
ENST00000546285.1
ENST00000612790.1
CDS CAA 90 bp ATCTATCACAATTCAAATGCAACAGTCTGTCCCAGTAGCATACAGTaGGTATCCTCTATTTTCCATTGTATCCTCTATTTTCCATTCAGG +
Preference number: 6 (lower is better)
Translates to: IYHNSNATVCPSSIQ*VSSIFHCILYFPFR
Trigger: CCTGAATGGAAAATAGAGGATACAATGGAAAATAGAGGATACCAACTGTATGCTACTGGGACAGACTGTTGCATTTGAATTGTGATAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000543099.1
CDS TCA 72 bp AATGAATGTAGGACGAATATACAGACTAGCAGATGTTaGATATGGGACCCATTCTTGATCCAATTTCACAAG +
Preference number: 6 (lower is better)
Translates to: NECRTNIQTSRC*IWDPFLIQFHK
Trigger: CTTGTGAAATTGGATCAAGAATGGGTCCCATATTCAACATCTGCTAGTCTGTATATTCGTCCTACATTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261192.12
ENST00000342945.9
ENST00000538118.5
ENST00000539282.5
ENST00000539780.5
ENST00000544418.1
ENST00000546285.1
ENST00000612790.1