RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCAS3 (Homo sapiens)

Ensembl gene IDs: ENSG00000141376

Ensembl transcript IDs: ENST00000390652.9, ENST00000407086.8, ENST00000408905.7, ENST00000585744.5, ENST00000585812.5, ENST00000585979.5, ENST00000586041.1, ENST00000586241.1, ENST00000586484.1, ENST00000586705.5, ENST00000587002.1, ENST00000587037.5, ENST00000587294.5, ENST00000587872.1, ENST00000588008.1, ENST00000588168.5, ENST00000588462.5, ENST00000588532.5, ENST00000588569.1, ENST00000588720.1, ENST00000588874.5, ENST00000589222.5, ENST00000590128.5, ENST00000590352.1, ENST00000591147.5, ENST00000592702.5, ENST00000592827.1, ENST00000592848.5

Found 1221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCTCCTGGCCACAGCCTCCACCGACAGGTGTGGCAGAGGGCAAGTaGGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGG +
Preference number: 1 (lower is better)
Translates to: LSWPQPPPTGVAEGK*AEVLGEGSLLHPGR
Trigger: CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGGCTGTGGCCAGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR TCA 90 bp AGAAGCAGGTTGCTGGTACCTACGGGAAGCCAGTCGGGAAGAGGCTaGGGGGCTGGCTCTCATTGGTGGGCAGCGGAGATCGGTAGCCAT +
Preference number: 1 (lower is better)
Translates to: RSRLLVPTGSQSGRG*GAGSHWWAAEIGSH
Trigger: ATGGCTACCGATCTCCGCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589222.5
3UTR CCA 90 bp CGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTaGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTC +
Preference number: 1 (lower is better)
Translates to: RASTVSPGHSLHRQV*QRASALRCLEKGLF
Trigger: GAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR CCA 90 bp TTGAGCACCAAACTGTGGAGCAGGCAAGATTCTAGCCGCTCGAATTaGGCCATGTCGAACAGAGAAGAGCTCTTGTGCTTCACCACTGAT +
Preference number: 1 (lower is better)
Translates to: LSTKLWSRQDSSRSN*AMSNREELLCFTTD
Trigger: ATCAGTGGTGAAGCACAAGAGCTCTTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGAATCTTGCCTGCTCCACAGTTTGGTGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
3UTR TCA 90 bp AGGTGTCTTAAATTGAATGGACTTGACCATCTCCCCAGTACGAAGTaGATACAGATCCACACAACAGTACGGTGGGCTTGTGCCAGAAGA +
Preference number: 1 (lower is better)
Translates to: RCLKLNGLDHLPSTK*IQIHTTVRWACARR
Trigger: TCTTCTGGCACAAGCCCACCGTACTGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAGATGGTCAAGTCCATTCAATTTAAGACACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
3UTR CCA 90 bp TTAGTCTCTTATCAAGCTTCTAGACCCAACCTATCAGCTGCTTCCTaGAAGCCTTTCTCACTAATGTCCTTTCTCTGCTCCAGGATCCAA +
Preference number: 1 (lower is better)
Translates to: LVSYQASRPNLSAAS*KPFSLMSFLCSRIQ
Trigger: TTGGATCCTGGAGCAGAGAAAGGACATTAGTGAGAAAGGCTTCCAGGAAGCAGCTGATAGGTTGGGTCTAGAAGCTTGATAAGAGACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588532.5
3UTR-3UTR TCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGAGAGGGCAAGTGCGCTaGGGTGCTTGGAGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLRGQVR*GAWRRV
Trigger: GACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCT...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGGTCAAAATGGCCAGGTaGACGATCAACTCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGVKMAR*TINSVP
Trigger: GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGAC...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCCATCCAGGTAGGATaGGCGGCTGCTGTCACTAAG +
Preference number: 2 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGSIQVG*AAAVTK
Trigger: CTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGA...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGCTCCACCGACAGGTGTaGCAGAGGGCAAGTGCGCTG +
Preference number: 2 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRLHRQV*QRASAL
Trigger: CAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAG...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGTTCTACAGTCTCTCCTaGCCACAGCCTCCACCGACA +
Preference number: 2 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLFYSLS*PQPPPT
Trigger: TGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAA...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGCAAAGTTTCTTGGTATaGTGCCGCTGGTGGAGCCTG +
Preference number: 2 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLQSFLV*CRWWSL
Trigger: CAGGCTCCACCAGCGGCAGCATACCAAGAAACTTTG...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589222.5
3UTR-3UTR CCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTCCATCCAGGTAGGATaGGCGGCTGCTGTCACTAAG +
Preference number: 2 (lower is better)
Translates to: HRQVWQRASALRCLEKGLSIQVG*AAAVTK
Trigger: CTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGA...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCGTCAAAATGGCCAGGTaGACGATCAACTCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTVKMAR*TINSVP
Trigger: GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGAC...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGTCAAAATGGCCAGGTaGACGATCAACTCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLVKMAR*TINSVP
Trigger: GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGAC...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCAAGAGGCTGAGGGGCTaGCTCTCATTGGTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPKRLRG*LSLVGS
Trigger: GCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTT...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589222.5
3UTR-3UTR CCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCCACCGACAGGTGTaGCAGAGGGCAAGTGCGCTG +
Preference number: 2 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPLHRQV*QRASAL
Trigger: CAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAG...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCCTCCACCGACAGGTGTaGCAGAGGGCAAGTGCGCTG +
Preference number: 2 (lower is better)
Translates to: CDCPLRVKMARWTINSVPLHRQV*QRASAL
Trigger: CAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAG...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR TCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCCATGAGCTGAGGCTGTaGCTGTCCACTCAGGGTCAA +
Preference number: 2 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPHELRL*LSTQGQ
Trigger: TTGACCCTGAGTGGACAGTCACAGCCTCAGCTCATG...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGATGCAGGATGTCATATaGAAACATACACAGGGACCG +
Preference number: 2 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWMQDVI*KHTQGP
Trigger: CGGTCCCTGTGTATGTTTGCATATGACATCCTGCAT...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCTTCTACAGTCTCTCCTaGCCACAGCCTCCACCGACA +
Preference number: 2 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPFYSLS*PQPPPT
Trigger: TGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAA...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR TCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCCAGCCAGACATGAGCTaGGGCTGTGACTGTCCACTC +
Preference number: 2 (lower is better)
Translates to: CDCPLRVKMARWTINSVPQPDMS*GCDCPL
Trigger: GAGTGGACAGTCACAGCCTCAGCTCATGTCTGGCTG...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAGCAAGTGCGCTGAGGTaGTTGGAGAAGGGTCTCTTC +
Preference number: 2 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPASALR*LEKGLF
Trigger: GAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGC...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCGCAAGTGCGCTGAGGTaGTTGGAGAAGGGTCTCTTC +
Preference number: 2 (lower is better)
Translates to: CDCPLRVKMARWTINSVPASALR*LEKGLF
Trigger: GAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGC...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGATGCAGGATGTCATATaGAAACATACACAGGGACCG +
Preference number: 2 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVMQDVI*KHTQGP
Trigger: CGGTCCCTGTGTATGTTTGCATATGACATCCTGCAT...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTCCGTTCACCCCGTGCTaGAGTGGGGCTGACCAAGGG +
Preference number: 2 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGPFTPC*SGADQG
Trigger: CCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGG...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCAGAAGCAGGTTGCTaGTACCTACGGGAAGCCAGT +
Preference number: 2 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPSEAGC*YLREAS
Trigger: ACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGA...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589222.5
3UTR-3UTR TCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCGGGAAGAGGCTaGGGGGCTGGCTCTCATTGG +
Preference number: 2 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLQSGRG*GAGSHW
Trigger: CCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTG...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589222.5
3UTR-3UTR GCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGCAAAAGCGGATCCAATaGAGGATGTCATATGCAAAC +
Preference number: 2 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVQKRIQ*RMSYAN
Trigger: GTTTGCATATGACATCCTGCATTGGATCCGCTTTTG...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCACCTCCGTTCACCCCGTaGTGGAGTGGGGCTGACCAA +
Preference number: 2 (lower is better)
Translates to: TNCSVIYWTRRALFNRASPPFTP*WSGADQ
Trigger: TTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGG...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAGTCAAAATGGCCAGGTaGACGATCAACTCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPVKMAR*TINSVP
Trigger: GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGAC...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATGGGGCTGGCTCTCATTaGTGGGCAGCGGAGATCGGT +
Preference number: 2 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDGAGSH*WAAEIG
Trigger: ACCGATCTCCGCTGCCCACCAATGAGAGCCAGCCCC...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589222.5
3UTR-3UTR TCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTAGAGGGCAAGTGCGCTaGGGTGCTTGGAGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGRGQVR*GAWRRV
Trigger: GACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCT...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR TCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAGAGGGCAAGTGCGCTaGGGTGCTTGGAGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDRGQVR*GAWRRV
Trigger: GACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCT...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR TCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAAGAGGGCAAGTGCGCTaGGGTGCTTGGAGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: TNCSVIYWTRRALFNRASRGQVR*GAWRRV
Trigger: GACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCT...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCTCCACCGACAGGTGTaGCAGAGGGCAAGTGCGCTG +
Preference number: 2 (lower is better)
Translates to: QCRMSYANIHRDRASTVSLHRQV*QRASAL
Trigger: CAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAG...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATTCAGGCCCCCAGATCTaGTCACTGTTCCAGGCTCCC +
Preference number: 2 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDSGPQI*SLFQAP
Trigger: GGGAGCCTGGAACAGTGACCAGATCTGGGGGCCTGA...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTCAGGCCCCCAGATCTaGTCACTGTTCCAGGCTCCC +
Preference number: 2 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGSGPQI*SLFQAP
Trigger: GGGAGCCTGGAACAGTGACCAGATCTGGGGGCCTGA...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCACCGTTCACCCCGTGCTaGAGTGGGGCTGACCAAGGG +
Preference number: 2 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPPFTPC*SGADQG
Trigger: CCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGG...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATGCTGGCTCTCATTGGTaGGCAGCGGAGATCGGTAGC +
Preference number: 2 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDAGSHW*AAEIGS
Trigger: GCTACCGATCTCCGCTGCCCACCAATGAGAGCCAGC...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
3UTR-3UTR TCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGCATGAGCTGAGGCTGTaGCTGTCCACTCAGGGTCAA +
Preference number: 2 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRHELRL*LSTQGQ
Trigger: TTGACCCTGAGTGGACAGTCACAGCCTCAGCTCATG...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCACTCCACCGACAGGTGTaGCAGAGGGCAAGTGCGCTG +
Preference number: 2 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPLHRQV*QRASAL
Trigger: CAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAG...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCACTGACCAAGGGAAGCTaGGGGCAGTGTGTGTCACAG +
Preference number: 2 (lower is better)
Translates to: TNCSVIYWTRRALFNRASLTKGS*GQCVSQ
Trigger: CTGTGACACACACTGCCCCCAGCTTCCCTTGGTCAG...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR TCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCAAGAGGGCAAGTGCGCTaGGGTGCTTGGAGAAGGGTC +
Preference number: 2 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPRGQVR*GAWRRV
Trigger: GACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCT...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR TCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTCATGAGCTGAGGCTGTaGCTGTCCACTCAGGGTCAA +
Preference number: 2 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGHELRL*LSTQGQ
Trigger: TTGACCCTGAGTGGACAGTCACAGCCTCAGCTCATG...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR TCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTCAGCCAGACATGAGCTaGGGCTGTGACTGTCCACTC +
Preference number: 2 (lower is better)
Translates to: VIYWTRRALFNRASVTTVQPDMS*GCDCPL
Trigger: GAGTGGACAGTCACAGCCTCAGCTCATGTCTGGCTG...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATGCAAGTGCGCTGAGGTaGTTGGAGAAGGGTCTCTTC +
Preference number: 2 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDASALR*LEKGLF
Trigger: GAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGC...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGCAAGTGCGCTGAGGTaGTTGGAGAAGGGTCTCTTC +
Preference number: 2 (lower is better)
Translates to: RIQCRMSYANIHRDRASTASALR*LEKGLF
Trigger: GAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGC...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATTCCATCCAGGTAGGATaGGCGGCTGCTGTCACTAAG +
Preference number: 2 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDSIQVG*AAAVTK
Trigger: CTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGA...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCATCCATCCAGGTAGGATaGGCGGCTGCTGTCACTAAG +
Preference number: 2 (lower is better)
Translates to: TNCSVIYWTRRALFNRASSIQVG*AAAVTK
Trigger: CTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGA...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACATTCTACAGTCTCTCCTaGCCACAGCCTCCACCGACA +
Preference number: 2 (lower is better)
Translates to: RIQCRMSYANIHRDRASTFYSLS*PQPPPT
Trigger: TGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAA...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCATTCTACAGTCTCTCCTaGCCACAGCCTCCACCGACA +
Preference number: 2 (lower is better)
Translates to: TNCSVIYWTRRALFNRASFYSLS*PQPPPT
Trigger: TGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAA...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR TCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCACACGGTTTCCTTCACTaGTCAGTACAGGACCAGGGT +
Preference number: 2 (lower is better)
Translates to: TNCSVIYWTRRALFNRASHGFLH*SVQDQG
Trigger: ACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTG...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCCAAAAGCGGATCCAATaGAGGATGTCATATGCAAAC +
Preference number: 2 (lower is better)
Translates to: CDCPLRVKMARWTINSVPQKRIQ*RMSYAN
Trigger: GTTTGCATATGACATCCTGCATTGGATCCGCTTTTG...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTAGTTTCTTGGTATGCTaGCGCTGGTGGAGCCTGAGC +
Preference number: 2 (lower is better)
Translates to: VIYWTRRALFNRASVTTVSFLVC*RWWSLS
Trigger: GCTCAGGCTCCACCAGCGGCAGCATACCAAGAAACT...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
3UTR-3UTR CCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTTCCATCCAGGTAGGATaGGCGGCTGCTGTCACTAAG +
Preference number: 2 (lower is better)
Translates to: QCRMSYANIHRDRASTVSSIQVG*AAAVTK
Trigger: CTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGA...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATCACTCAGGGTCAAAATaGCCAGGTGGACGATCAACT +
Preference number: 2 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDHSGSK*PGGRST
Trigger: AGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR TCA 90 bp AGTGAATACAGATCCACACAACAGTACGGTGGGCTTGTGCCAGAAGATCCAATGCTCCCCAGTACGAAGTaGATACAGATCCACACAACA +
Preference number: 2 (lower is better)
Translates to: SEYRSTQQYGGLVPEDPMLPSTK*IQIHTT
Trigger: TGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAG...CATTGGATCTTCTGGCACAAGCCCACCGTACTGTTGTGTGGATCTGTATTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
3UTR-3UTR GCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACTTATTGGACAAGACGTaGACTTTTCAACAGGGCCTC +
Preference number: 2 (lower is better)
Translates to: RALFNRASVTTVSFTDQYLLDKT*TFQQGL
Trigger: GAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAA...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp CAACAGTACGGTGGGCTTGTGCCAGAAGATCCAATGCTCTTACAAACACCAAGGGGATCCAAACCAGGATaGTATCCTGCATTTAGGACA +
Preference number: 2 (lower is better)
Translates to: QQYGGLVPEDPMLLQTPRGSKPG*YPAFRT
Trigger: TGTCCTAAATGCAGGATAGCATCCTGGTTTGGATCC...CCTTGGTGTTTGTAAGAGCATTGGATCTTCTGGCACAAGCCCACCGTACTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592848.5
3UTR-3UTR GCA 90 bp CACAACAGTACGGTGGGCTTGTGCCAGAAGATCCAATGCTCTTACAAACACCAACTAATGTCCTTTCTCTaGTCCAGGATCCAAACCAGG +
Preference number: 2 (lower is better)
Translates to: HNSTVGLCQKIQCSYKHQLMSFL*SRIQTR
Trigger: CCTGGTTTGGATCCTGGAGCAGAGAAAGGACATTAG...TTGGTGTTTGTAAGAGCATTGGATCTTCTGGCACAAGCCCACCGTACTGTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592848.5
3UTR-3UTR CCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGGCCATCAAAGTTTCTTaGTATGCTGCCGCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKAIKVS*YAAAGG
Trigger: TCCACCAGCGGCAGCATACCAAGAAACTTTGATGGC...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
3UTR-3UTR TCA 90 bp GTACAGCTATCAAAGGCAGCAATTTTCTCCTGCAAGACTACGACAAGGATCCGTCTCCCCAGTACGAAGTaGATACAGATCCACACAACA +
Preference number: 2 (lower is better)
Translates to: VQLSKAAIFSCKTTTRIRLPSTK*IQIHTT
Trigger: TGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAG...ACGGATCCTTGTCGTAGTCTTGCAGGAGAAAATTGCTGCCTTTGATAGCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
3UTR-3UTR GCA 90 bp AAAATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACGCAAGTGCGCTGAGGTaGTTGGAGAAGGGTCTCTTC +
Preference number: 2 (lower is better)
Translates to: KIQKRIQCRMSYANIHRDASALR*LEKGLF
Trigger: GAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGC...GTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATATGCAGGATGTCATATaGAAACATACACAGGGACCG +
Preference number: 2 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDMQDVI*KHTQGP
Trigger: CGGTCCCTGTGTATGTTTGCATATGACATCCTGCAT...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp CCAGTACGAAGTGAATACAGATCCACACAACAGTACGGTGGGCTTGTGCCAGAATGCCAGAAGATCCAATaGTCTTACAAACACCAAGGA +
Preference number: 2 (lower is better)
Translates to: PVRSEYRSTQQYGGLVPECQKIQ*SYKHQG
Trigger: TCCTTGGTGTTTGTAAGAGCATTGGATCTTCTGGCA...TTCTGGCACAAGCCCACCGTACTGTTGTGTGGATCTGTATTCACTTCGTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
3UTR-3UTR CCA 90 bp AAAGGCAGCAATTTTCTCCTGCAAGACTACGACAAGGATCCGTTTATTGCAATGCACACAACAGTACGGTaGGCTTGTGCCAGAAGATCC +
Preference number: 2 (lower is better)
Translates to: KGSNFLLQDYDKDPFIAMHTTVR*ACARRS
Trigger: GGATCTTCTGGCACAAGCCCACCGTACTGTTGTGTG...CATTGCAATAAACGGATCCTTGTCGTAGTCTTGCAGGAGAAAATTGCTGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
3UTR-3UTR GCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTCAAAAGCGGATCCAATaGAGGATGTCATATGCAAAC +
Preference number: 2 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGQKRIQ*RMSYAN
Trigger: GTTTGCATATGACATCCTGCATTGGATCCGCTTTTG...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATCAAAAGCGGATCCAATaGAGGATGTCATATGCAAAC +
Preference number: 2 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDQKRIQ*RMSYAN
Trigger: GTTTGCATATGACATCCTGCATTGGATCCGCTTTTG...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR GCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGTTATTGGACAAGACGTaGACTTTTCAACAGGGCCTC +
Preference number: 2 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKLLDKT*TFQQGL
Trigger: GAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAA...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTGCAGCGTGATTTATTaGACAAGACGTGCACTTTTC +
Preference number: 2 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGCSVIY*TRRALF
Trigger: GAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCA...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CCA 90 bp CTGGAAGCCTTTCTCACTAATGTCCTTTCTCTGCTCCAGGATCCAAACCAGGATAGTGCTAGGTGTTTGTaGCAATTATACTGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: LEAFLTNVLSLLQDPNQDSARCL*QLYWCE
Trigger: CTCACACCAGTATAATTGCCACAAACACCTAGCACT...ATCCTGGTTTGGATCCTGGAGCAGAGAAAGGACATTAGTGAGAAAGGCTTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588532.5
3UTR-3UTR CCA 90 bp CCTTTCTCACTAATGTCCTTTCTCTGCTCCAGGATCCAAACCAGGATGCTATCCTTGTGGCAATTATACTaGTGTGAGTATTACTGTACT +
Preference number: 2 (lower is better)
Translates to: PFSLMSFLCSRIQTRMLSLWQLY*CEYYCT
Trigger: AGTACAGTAATACTCACACCAGTATAATTGCCACAA...GGATAGCATCCTGGTTTGGATCCTGGAGCAGAGAAAGGACATTAGTGAGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588532.5
3UTR-3UTR GCA 90 bp GACTACGACAAGGATCCGTTTATTGCAATGGAGATCATAAATAGGTGTCTTAAAAGAGAAGAGCTCTTGTaGTTCACCACTGATAGGGAT +
Preference number: 2 (lower is better)
Translates to: DYDKDPFIAMEIINRCLKREELL*FTTDRD
Trigger: ATCCCTATCAGTGGTGAAGCACAAGAGCTCTTCTCT...TTTAAGACACCTATTTATGATCTCCATTGCAATAAACGGATCCTTGTCGTAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
3UTR-3UTR CCA 90 bp AATCAACAAAGGCGGTTCATTCCCAGTACTATGTATTTCATGAAATTCCAGATTTTGTGGCAATTATACTaGTGTGAGTATTACTGTACT +
Preference number: 2 (lower is better)
Translates to: NQQRRFIPSTMYFMKFQILWQLY*CEYYCT
Trigger: AGTACAGTAATACTCACACCAGTATAATTGCCACAA...AATCTGGAATTTCATGAAATACATAGTACTGGGAATGAACCGCCTTTGTTGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591147.5
3UTR TCA 72 bp GCCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTaGGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGG +
Preference number: 3 (lower is better)
Translates to: ASTDRCGRGQVR*GAWRRVSSPSR
Trigger: CCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR TCA 72 bp TTGCTGGTACCTACGGGAAGCCAGTCGGGAAGAGGCTaGGGGGCTGGCTCTCATTGGTGGGCAGCGGAGATC +
Preference number: 3 (lower is better)
Translates to: LLVPTGSQSGRG*GAGSHWWAAEI
Trigger: GATCTCCGCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTGGCTTCCCGTAGGTACCAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589222.5
3UTR CCA 72 bp ACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTaGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: TVSPGHSLHRQV*QRASALRCLEK
Trigger: CTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR GCA 72 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTaGTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGA +
Preference number: 3 (lower is better)
Translates to: HRQVWQRASALR*LEKGLFSIQVG
Trigger: TCCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CAA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGCTGCTGTCACTAAGCTaGGGGAAGGTGGTTGATGAA +
Preference number: 3 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVLLSLS*GKVVDE
Trigger: TTCATCAACCACCTTCCCCAAGCTTAGTGACAGCAG...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CAA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTGCTGTCACTAAGCTaGGGGAAGGTGGTTGATGAA +
Preference number: 3 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSLLSLS*GKVVDE
Trigger: TTCATCAACCACCTTCCCCAAGCTTAGTGACAGCAG...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR CCA 72 bp TGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGATaGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGT +
Preference number: 3 (lower is better)
Translates to: CLEKGLFSIQVG*AAAVTKLGEGG
Trigger: ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR CCA 72 bp AAACTGTGGAGCAGGCAAGATTCTAGCCGCTCGAATTaGGCCATGTCGAACAGAGAAGAGCTCTTGTGCTTC +
Preference number: 3 (lower is better)
Translates to: KLWSRQDSSRSN*AMSNREELLCF
Trigger: GAAGCACAAGAGCTCTTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGAATCTTGCCTGCTCCACAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586241.1
ENST00000591147.5
ENST00000592848.5
3UTR-3UTR CAA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACCTGCTGTCACTAAGCTaGGGGAAGGTGGTTGATGAA +
Preference number: 3 (lower is better)
Translates to: RALFNRASVTTVSFTDQYLLSLS*GKVVDE
Trigger: TTCATCAACCACCTTCCCCAAGCTTAGTGACAGCAG...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR GCA 72 bp GGACACCAACTGCAGCGTGATTTATTGGACAAGACGTaGACTTTTCAACAGGGCCTCAGTAACCACGGTTTC +
Preference number: 3 (lower is better)
Translates to: GHQLQRDLLDKT*TFQQGLSNHGF
Trigger: GAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR GCA 72 bp GCTTCCTGGAAGCCTTTCTCACTAATGTCCTTTCTCTaGTCCAGGATCCAAACCAGGATGCTATCCTGCATT +
Preference number: 3 (lower is better)
Translates to: ASWKPFSLMSFL*SRIQTRMLSCI
Trigger: AATGCAGGATAGCATCCTGGTTTGGATCCTGGAGCAGAGAAAGGACATTAGTGAGAAAGGCTTCCAGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588532.5
3UTR-3UTR CAA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTGCTGTCACTAAGCTaGGGGAAGGTGGTTGATGAA +
Preference number: 3 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSLLSLS*GKVVDE
Trigger: TTCATCAACCACCTTCCCCAAGCTTAGTGACAGCAG...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR-3UTR CAA 90 bp AAAATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCCAGTCAGAAGCAGGTaGCTGGTACCTACGGGAAGC +
Preference number: 3 (lower is better)
Translates to: KIQKRIQCRMSYANIHRDPVRSR*LVPTGS
Trigger: GCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTGG...GTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589222.5
3UTR-3UTR CAA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCACTGCTGTCACTAAGCTaGGGGAAGGTGGTTGATGAA +
Preference number: 3 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPLLSLS*GKVVDE
Trigger: TTCATCAACCACCTTCCCCAAGCTTAGTGACAGCAG...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR CCA 72 bp TATCAAGCTTCTAGACCCAACCTATCAGCTGCTTCCTaGAAGCCTTTCTCACTAATGTCCTTTCTCTGCTCC +
Preference number: 3 (lower is better)
Translates to: YQASRPNLSAAS*KPFSLMSFLCS
Trigger: GGAGCAGAGAAAGGACATTAGTGAGAAAGGCTTCCAGGAAGCAGCTGATAGGTTGGGTCTAGAAGCTTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588532.5
3UTR-3UTR CAA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGCTGCAGCGTGATTTATaGGACAAGACGTGCACTTTT +
Preference number: 3 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKLQRDL*DKTCTF
Trigger: AAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAG...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR TCA 72 bp AAATTGAATGGACTTGACCATCTCCCCAGTACGAAGTaGATACAGATCCACACAACAGTACGGTGGGCTTGT +
Preference number: 3 (lower is better)
Translates to: KLNGLDHLPSTK*IQIHTTVRWAC
Trigger: ACAAGCCCACCGTACTGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAGATGGTCAAGTCCATTCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
3UTR GCA 72 bp TTCCACTGTAAGCCTTTCTCACTAATGTCCTTTCTCTaGTCCAGGATCCAAACCAGGATGCTATCCTGCATT +
Preference number: 3 (lower is better)
Translates to: FHCKPFSLMSFL*SRIQTRMLSCI
Trigger: AATGCAGGATAGCATCCTGGTTTGGATCCTGGAGCAGAGAAAGGACATTAGTGAGAAAGGCTTACAGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592848.5
3UTR-3UTR CAA 90 bp CCTTTCTCACTAATGTCCTTTCTCTGCTCCAGGATCCAAACCAGGATGCTATCCTTAAGTGCTAGGTGTTaGTGGCAATTATACTGGTGT +
Preference number: 3 (lower is better)
Translates to: PFSLMSFLCSRIQTRMLSLSARC*WQLYWC
Trigger: ACACCAGTATAATTGCCACAAACACCTAGCACTTAA...GGATAGCATCCTGGTTTGGATCCTGGAGCAGAGAAAGGACATTAGTGAGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588532.5
3UTR GCA 72 bp GTGAAAGTACAGCTATCAAAGGCAGCAATTTTCTCCTaGAAGACTACGACAAGGATCCGTTTATTGCAATGG +
Preference number: 3 (lower is better)
Translates to: VKVQLSKAAIFS*KTTTRIRLLQW
Trigger: CCATTGCAATAAACGGATCCTTGTCGTAGTCTTGCAGGAGAAAATTGCTGCCTTTGATAGCTGTACTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
3UTR-3UTR CAA 90 bp ATCACTGTAGCCAATCATAATCAACAAAGGCGGTTCATTCCCAGTACTATGTATTTAAGTGCTAGGTGTTaGTGGCAATTATACTGGTGT +
Preference number: 3 (lower is better)
Translates to: ITVANHNQQRRFIPSTMYLSARC*WQLYWC
Trigger: ACACCAGTATAATTGCCACAAACACCTAGCACTTAA...ATACATAGTACTGGGAATGAACCGCCTTTGTTGATTATGATTGGCTACAGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591147.5
3UTR-3UTR CAA 90 bp GACTACGACAAGGATCCGTTTATTGCAATGGAGATCATAAATAGGTGTCTTAAAAAAGTTATCACATTTTaGAGCACCAAACTGTGGAGC +
Preference number: 3 (lower is better)
Translates to: DYDKDPFIAMEIINRCLKKVITF*STKLWS
Trigger: GCTCCACAGTTTGGTGCTCAAAAATGTGATAACTTT...TTTAAGACACCTATTTATGATCTCCATTGCAATAAACGGATCCTTGTCGTAGTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
CDS-3UTR TCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGTCTTGGGTGCAGTGCTaGGGGGTCGCGGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGSWVQC*GVAAPS
Trigger: TGATGGAGCCGCGACCCCTCAGCACTGCACCCAAGA...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGCCTCCGTGTGCTCCATaGAGGACATGTGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGPPCAP*RTCAAA
Trigger: GGCTGCGGCACATGTCCTCCATGGAGCACACGGAGG...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGGGGGCTGGCTCTCATTaGTGGGCAGCGGAGATCGGT +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGGAGSH*WAAEIG
Trigger: ACCGATCTCCGCTGCCCACCAATGAGAGCCAGCCCC...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
67% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGTGTAGGACTGCTCTGTaGCAGCCTGGGGGCGAACCA +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGCRTAL*QPGGEP
Trigger: TGGTTCGCCCCCAGGCTGTCACAGAGCAGTCCTACA...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGGGCTGGCTCTCATTaGTGGGCAGCGGAGATCGGT +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWGAGSH*WAAEIG
Trigger: ACCGATCTCCGCTGCCCACCAATGAGAGCCAGCCCC...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGAAGAGGCTGAGGGGCTaGCTCTCATTGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGKRLRG*LSLVGS
Trigger: GCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTT...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGTCAGGCCCCCAGATCTaGTCACTGTTCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGSGPQI*SLFQAP
Trigger: GGGAGCCTGGAACAGTGACCAGATCTGGGGGCCTGA...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGCCTTCCCTAGTACTCTaGGCCTCCGTTCACCCCGTG +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGPSLVL*ASVHPV
Trigger: CACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGG...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGGACGTCCCGGCTAGGTaGCTCGGCCATGGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRDVPAR*LGHGVG
Trigger: GCCGACGCCATGGCCGAGTCACCTAGCCGGGACGTC...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGCCGCTGGTGGAGCCTaGGCTGTTACTCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWAAGGA*AVTQSL
Trigger: GAGACTCTGAGTAACAGCTCAGGCTCCACCAGCGGC...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGCAGTCGGGAAGAGGCTaGGGGGCTGGCTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLQSGRG*GAGSHW
Trigger: CCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTG...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGAGGCCCTCCTCCGTGTaGTCCATGGAGGACATGTGC +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWRPSSV*SMEDMC
Trigger: GCACATGTCCTCCATGGAGCACACGGAGGAGGGCCT...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CTACGGGAAGCCAGTCGGGAAGAGGCTGAGGGGCTGGCTCTCATTGGTGGGCAGCCTCCGTTCACCCCGTaGTGGAGTGGGGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: LREASREEAEGLALIGGQPPFTP*WSGADQ
Trigger: TTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGG...CTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTGGCTTCCCGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR CCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGCACACTGGCTTCTCATaGGCAGGGAAGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGHTGFS*AGKWAT
Trigger: TGTGGCCCACTTCCCTGCCCATGAGAAGCCAGTGTG...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCCCTCCGTGTGCTCCATaGAGGACATGTGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTPPCAP*RTCAAA
Trigger: GGCTGCGGCACATGTCCTCCATGGAGCACACGGAGG...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCGGGGCTGGCTCTCATTaGTGGGCAGCGGAGATCGGT +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTGAGSH*WAAEIG
Trigger: ACCGATCTCCGCTGCCCACCAATGAGAGCCAGCCCC...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGGGCCACCATAAGGGTTaGTGGGGAAAACGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGGHHKG*WGKRGK
Trigger: CTTCCCACGTTTTCCCCATCAACCCTTATGGTGGCC...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCATGACCCTGGCATGCTaGCGGGGTCAGAGCGGACTG +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSMTLAC*RGQSGL
Trigger: CAGTCCGCTCTGACCCCGTCAGCATGCCAGGGTCAT...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCATGACCCTGGCATGCTaGCGGGGTCAGAGCGGACTG +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLMTLAC*RGQSGL
Trigger: CAGTCCGCTCTGACCCCGTCAGCATGCCAGGGTCAT...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGATGACCCTGGCATGCTaGCGGGGTCAGAGCGGACTG +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVMTLAC*RGQSGL
Trigger: CAGTCCGCTCTGACCCCGTCAGCATGCCAGGGTCAT...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCAGAGACTGGACGGGATaGCCCTGGCATGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLRDWTG*PWHADG
Trigger: CCCGTCAGCATGCCAGGGTCATCCCGTCCAGTCTCT...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCCAGTCGGGAAGAGGCTaGGGGGCTGGCTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSQSGRG*GAGSHW
Trigger: CCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTG...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGCATGAGCTGAGGCTGTaGCTGTCCACTCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGHELRL*LSTQGQ
Trigger: TTGACCCTGAGTGGACAGTCACAGCCTCAGCTCATG...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCCCTCCGTTCACCCCGTaGTGGAGTGGGGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLPPFTP*WSGADQ
Trigger: TTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGG...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGGGTCAGAGCGGACTaGCTGGATCCTGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWGVRAD*LDPETV
Trigger: AACAGTCTCAGGATCCAGCCAGTCCGCTCTGACCCC...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCGCTGGCTCTCATTGGTaGGCAGCGGAGATCGGTAGC +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTAGSHW*AAEIGS
Trigger: GCTACCGATCTCCGCTGCCCACCAATGAGAGCCAGC...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGCTGACCAAGGGAAGCTaGGGGCAGTGTGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWLTKGS*GQCVSQ
Trigger: CTGTGACACACACTGCCCCCAGCTTCCCTTGGTCAG...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGTGTAGGACTGCTCTGTaGCAGCCTGGGGGCGAACCA +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVCRTAL*QPGGEP
Trigger: TGGTTCGCCCCCAGGCTGTCACAGAGCAGTCCTACA...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTTGTAGGACTGCTCTGTaGCAGCCTGGGGGCGAACCA +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSCRTAL*QPGGEP
Trigger: TGGTTCGCCCCCAGGCTGTCACAGAGCAGTCCTACA...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGAGTGTGCCTGTCAGCTaGGTCACCACTTTCCCTACC +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWSVPVS*VTTFPT
Trigger: GGTAGGGAAAGTGGTGACTCAGCTGACAGGCACACT...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGATCTTCTGTCACACCTaGAGGCAGTGTGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGIFCHT*RQCACQ
Trigger: CTGACAGGCACACTGCCTTCAGGTGTGACAGAAGAT...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGGCCGCTGGTGGAGCCTaGGCTGTTACTCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVAAGGA*AVTQSL
Trigger: GAGACTCTGAGTAACAGCTCAGGCTCCACCAGCGGC...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCAGAGGGCAAGTGCGCTaGGGTGCTTGGAGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSRGQVR*GAWRRV
Trigger: GACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCT...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGCATGAGCTGAGGCTGTaGCTGTCCACTCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWHELRL*LSTQGQ
Trigger: TTGACCCTGAGTGGACAGTCACAGCCTCAGCTCATG...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGTCACTAATCTTGGGTaGAGTGCTGAGGGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLVTNLG*SAEGSR
Trigger: CCGCGACCCCTCAGCACTGCACCCAAGATTAGTGAC...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTCCATGGAGGACATGTaGCGCAGCCCGAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLSMEDM*RSPKPS
Trigger: TGAGGGCTTCGGGCTGCGGCACATGTCCTCCATGGA...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCTCCATGGAGGACATGTaGCGCAGCCCGAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSSMEDM*RSPKPS
Trigger: TGAGGGCTTCGGGCTGCGGCACATGTCCTCCATGGA...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGACCCAGCGACAGTCATaGCTGAAGCAGATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGTQRQS*LKQMSC
Trigger: ACAGGACATCTGCTTCAGCCATGACTGTCGCTGGGT...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGTCAGAGCGGACTGGCTaGATCCTGAGACTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGSERTG*ILRLLR
Trigger: TCTCAACAGTCTCAGGATCCAGCCAGTCCGCTCTGA...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGGGGGTCAGAGCGGACTaGCTGGATCCTGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGGVRAD*LDPETV
Trigger: AACAGTCTCAGGATCCAGCCAGTCCGCTCTGACCCC...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTGCTGGCTCTCATTGGTaGGCAGCGGAGATCGGTAGC +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSAGSHW*AAEIGS
Trigger: GCTACCGATCTCCGCTGCCCACCAATGAGAGCCAGC...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GGGGCTGGCCAGTCAGAAGCAGGTTGCTGGTACCTACGGGAAGCCAGTCGGGAAAAGAGGCTGAGGGGCTaGCTCTCATTGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GAGQSEAGCWYLREASREKRLRG*LSLVGS
Trigger: GCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTT...TTCCCGACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTGGCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGTCAGGCCCCCAGATCTaGTCACTGTTCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVSGPQI*SLFQAP
Trigger: GGGAGCCTGGAACAGTGACCAGATCTGGGGGCCTGA...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCCCGTTCACCCCGTGCTaGAGTGGGGCTGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPPFTPC*SGADQG
Trigger: CCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGG...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGCCGTTCACCCCGTGCTaGAGTGGGGCTGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRPFTPC*SGADQG
Trigger: CCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGG...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAAGCCAGTCGGGAAGAGGCTGAGGGGCTGGCTCTCATTGGTGGGCAGCGGAGAAGTGTGCCTGTCAGCTaGGTCACCACTTTCCCTACC +
Preference number: 4 (lower is better)
Translates to: EASREEAEGLALIGGQRRSVPVS*VTTFPT
Trigger: GGTAGGGAAAGTGGTGACTCAGCTGACAGGCACACT...TCTCCGCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR TCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGTACCCCGGAGAGTACTaGCCACAACCCAGCGACAGT +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVYPGEY*PQPSDS
Trigger: ACTGTCGCTGGGTTGTGGTCAGTACTCTCCGGGGTA...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGGCCCGGTTCGTTTGGTaGTGGTCCCCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGARFVW*WSPMSL
Trigger: CAATGACATTGGGGACCATCACCAAACGAACCGGGC...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000390652.9
ENST00000588462.5
CDS-3UTR TCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCGCCCGGTTCGTTTGGTaGTGGTCCCCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTARFVW*WSPMSL
Trigger: CAATGACATTGGGGACCATCACCAAACGAACCGGGC...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000390652.9
ENST00000588462.5
CDS-3UTR TCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGTCTTGGGTGCAGTGCTaGGGGGTCGCGGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRSWVQC*GVAAPS
Trigger: TGATGGAGCCGCGACCCCTCAGCACTGCACCCAAGA...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGAGGGATGGATGGTTTTaGACTGGAACTGTGGACCCA +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGRDGWF*TGTVDP
Trigger: TGGGTCCACAGTTCCAGTTCAAAACCATCCATCCCT...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCCAGTCGGGAAGAGGCTaGGGGGCTGGCTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPQSGRG*GAGSHW
Trigger: CCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTG...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGCACGGTTTCCTTCACTaGTCAGTACAGGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWHGFLH*SVQDQG
Trigger: ACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTG...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGTGACCCAGAAGGGCTaGTTGATAGACCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWVTQKG*LIDLEQ
Trigger: CTGTTCCAGGTCTATCAAGCAGCCCTTCTGGGTCAC...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGAGTTTCTTGGTATGCTaGCGCTGGTGGAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLSFLVC*RWWSLS
Trigger: GCTCAGGCTCCACCAGCGGCAGCATACCAAGAAACT...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGCAGTCAGAAGCAGGTTaGTGGTACCTACGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLQSEAG*WYLREA
Trigger: GGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTG...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGAACTGTGATGATGCCTaGGACCAAAGGACTCCGCCG +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLNCDDA*DQRTPP
Trigger: CGGCGGAGTCCTTTGGTCCCAGGCATCATCACAGTT...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAAGCCAGTCGGGAAGAGGCTGAGGGGCTGGCTCTCATTGGTGGGCAGCGGAGATCATGGGCAGGGAAGTaGGCCACAATGCCATCACTG +
Preference number: 4 (lower is better)
Translates to: EASREEAEGLALIGGQRRSWAGK*ATMPSL
Trigger: CAGTGATGGCATTGTGGCCCACTTCCCTGCCCATGA...TCTCCGCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR CCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGAGCCATGCAGCACACTaGCTTCTCATGGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLSHAAH*LLMGRE
Trigger: TTCCCTGCCCATGAGAAGCCAGTGTGCTGCATGGCT...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGCGCCCATCGATTTGCTaGGTGAAATTTGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGRPSIC*VKFVEE
Trigger: CTCCTCCACAAATTTCACCCAGCAAATCGATGGGCG...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCGCGAGGAGCAGAGGGTaGTTTGCATTAAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTARSRG*FALNGG
Trigger: GCCACCGTTTAATGCAAACCACCCTCTGCTCCTCGC...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGATCCAAAAGAGGCTGTaGCGTGTCACTCGGACCATG +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWIQKRL*RVTRTM
Trigger: CATGGTCCGAGTGACACGCCACAGCCTCTTTTGGAT...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGTCAGAGCGGACTGGCTaGATCCTGAGACTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWSERTG*ILRLLR
Trigger: TCTCAACAGTCTCAGGATCCAGCCAGTCCGCTCTGA...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGCCTCCGTGTGCTCCATaGAGGACATGTGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRPPCAP*RTCAAA
Trigger: GGCTGCGGCACATGTCCTCCATGGAGCACACGGAGG...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCTTGGTATGCTGCCGCTaGTGGAGCCTGAGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTLVCCR*WSLSCY
Trigger: GTAACAGCTCAGGCTCCACCAGCGGCAGCATACCAA...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGTCAGAAGCAGGTTGCTaGTACCTACGGGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWSEAGC*YLREAS
Trigger: ACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGA...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGTCCATCCAGGTAGGATaGGCGGCTGCTGTCACTAAG +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLSIQVG*AAAVTK
Trigger: CTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGA...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCTCCATCCAGGTAGGATaGGCGGCTGCTGTCACTAAG +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTSIQVG*AAAVTK
Trigger: CTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGA...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCCCGTTCACCCCGTGCTaGAGTGGGGCTGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPPFTPC*SGADQG
Trigger: CCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGG...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGAACTGTGGTTTGGCCTaGGGGATGGATGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGNCGLA*GMDGFE
Trigger: TTCAAAACCATCCATCCCTCAGGCCAAACCACAGTT...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGTGTCACTCGGACCATaGGACTGCAACACAGATGAA +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWVSLGP*DCNTDE
Trigger: TTCATCTGTGTTGCAGTCTCATGGTCCGAGTGACAC...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GGTGGGCAGCGGAGATCGGTAGCCATCAAAGTTTCTTGGTATGCTGCCGCTGGTAGAGACTGGACGGGATaGCCCTGGCATGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: GGQRRSVAIKVSWYAAAGRDWTG*PWHADG
Trigger: CCCGTCAGCATGCCAGGGTCATCCCGTCCAGTCTCT...ACCAGCGGCAGCATACCAAGAAACTTTGATGGCTACCGATCTCCGCTGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR TCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCGACGTCCCGGCTAGGTaGCTCGGCCATGGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLADVPAR*LGHGVG
Trigger: GCCGACGCCATGGCCGAGTCACCTAGCCGGGACGTC...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGATGCTTCCCTCTCGCTaGAGTTCTGTTCCGGATCCC +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVMLPSR*SSVPDP
Trigger: GGGATCCGGAACAGAACTTCAGCGAGAGGGAAGCAT...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000588874.5
CDS-3UTR TCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCAGAGGGCAAGTGCGCTaGGGTGCTTGGAGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPRGQVR*GAWRRV
Trigger: GACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCT...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCATGAGCTGAGGCTGTaGCTGTCCACTCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSHELRL*LSTQGQ
Trigger: TTGACCCTGAGTGGACAGTCACAGCCTCAGCTCATG...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGACACCAACTGCAGCGTaGTTTATTGGACAAGACGTG +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGTPTAA*FIGQDV
Trigger: CACGTCTTGTCCAATAAATCACGCTGCAGTTGGTGT...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTGCCGGTTCGTTTGGTaGTGGTCCCCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGCRFVW*WSPMSL
Trigger: CAATGACATTGGGGACCATCACCAAACGAACCGGCA...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407086.8
ENST00000408905.7
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGTGCCGGTTCGTTTGGTaGTGGTCCCCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLCRFVW*WSPMSL
Trigger: CAATGACATTGGGGACCATCACCAAACGAACCGGCA...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000407086.8
ENST00000408905.7
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCATGCTTCCCTCTCGCTaGAGTTCTTCCTCCATCCCG +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSMLPSR*SSSSIP
Trigger: CGGGATGGAGGAAGAACTTCAGCGAGAGGGAAGCAT...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR GCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGAGCAGAGGGTGGTTTaGATTAAACGGTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWEQRVV*IKRWLQ
Trigger: TTGCAGCCACCGTTTAATGCAAACCACCCTCTGCTC...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGAGGCCCTCCTCCGTGTaGTCCATGGAGGACATGTGC +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRRPSSV*SMEDMC
Trigger: GCACATGTCCTCCATGGAGCACACGGAGGAGGGCCT...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGAGTTTCTTGGTATGCTaGCGCTGGTGGAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVSFLVC*RWWSLS
Trigger: GCTCAGGCTCCACCAGCGGCAGCATACCAAGAAACT...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGCAAAGTTTCTTGGTATaGTGCCGCTGGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGQSFLV*CRWWSL
Trigger: CAGGCTCCACCAGCGGCAGCATACCAAGAAACTTTG...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCCAGTCAGAAGCAGGTTaGTGGTACCTACGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLQSEAG*WYLREA
Trigger: GGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTG...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GGGGCTGGCCAGTCAGAAGCAGGTTGCTGGTACCTACGGGAAGCCAGTCGGGAAGCAAGTGCGCTGAGGTaGTTGGAGAAGGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GAGQSEAGCWYLREASREASALR*LEKGLF
Trigger: GAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGC...TTCCCGACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTGGCCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR GCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCCCTCCGTTCACCCCGTaGTGGAGTGGGGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPPPFTP*WSGADQ
Trigger: TTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGG...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGGAGATAACTGTGGTTTaGCCTGAGGGATGGATGGTT +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGEITVV*PEGWMV
Trigger: AACCATCCATCCCTCAGGCCAAACCACAGTTATCTC...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCATCCAAAAGAGGCTGTaGCGTGTCACTCGGACCATG +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTIQKRL*RVTRTM
Trigger: CATGGTCCGAGTGACACGCCACAGCCTCTTTTGGAT...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCCCTCCGTGTGCTCCATaGAGGACATGTGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPPPCAP*RTCAAA
Trigger: GGCTGCGGCACATGTCCTCCATGGAGCACACGGAGG...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGGTATGCTGCCGCTGGTaGAGCCTGAGCTGTTACTCA +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVVCCRW*SLSCYS
Trigger: TGAGTAACAGCTCAGGCTCCACCAGCGGCAGCATAC...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GCTGAGGGGCTGGCTCTCATTGGTGGGCAGCGGAGATCGGTAGCCATCAAAGTTGCTGGCTCTCATTGGTaGGCAGCGGAGATCGGTAGC +
Preference number: 4 (lower is better)
Translates to: AEGLALIGGQRRSVAIKVAGSHW*AAEIGS
Trigger: GCTACCGATCTCCGCTGCCCACCAATGAGAGCCAGC...AACTTTGATGGCTACCGATCTCCGCTGCCCACCAATGAGAGCCAGCCCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR CCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTACAGTCTCTCCTaGCCACAGCCTCCACCGACA +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLFYSLS*PQPPPT
Trigger: TGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAA...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCTCAGGCCCCCAGATCTaGTCACTGTTCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPSGPQI*SLFQAP
Trigger: GGGAGCCTGGAACAGTGACCAGATCTGGGGGCCTGA...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGATCTTCTGTCACACCTaGAGGCAGTGTGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVIFCHT*RQCACQ
Trigger: CTGACAGGCACACTGCCTTCAGGTGTGACAGAAGAT...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCCAAAGGACTCCGCCGTaGATTACTGTGGATGGCAAC +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSQRTPP*ITVDGN
Trigger: GTTGCCATCCACAGTAATTCACGGCGGAGTCCTTTG...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCAAAGGACTCCGCCGTaGATTACTGTGGATGGCAAC +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSQRTPP*ITVDGN
Trigger: GTTGCCATCCACAGTAATTCACGGCGGAGTCCTTTG...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGAGAATTTGGAAGACATaGAAGTCATGGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGRIWKT*KSWPRV
Trigger: CACCCTTGGCCATGACTTTCATGTCTTCCAAATTCT...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGGATGAGGACCAAGGATaGGTCAGAATTTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGDEDQG*VRIWKT
Trigger: TGTCTTCCAAATTCTGACTCATCCTTGGTCCTCATC...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAGCGACAGTCATGGCTaGAGCAGATGTCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTSDSHG*SRCPVL
Trigger: AAGTACAGGACATCTGCTTCAGCCATGACTGTCGCT...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGAGGGATGGATGGTTTTaGACTGGAACTGTGGACCCA +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLRDGWF*TGTVDP
Trigger: TGGGTCCACAGTTCCAGTTCAAAACCATCCATCCCT...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCCCTGTCAAAGGTACCTaGGGCAGCATCAATCACTGT +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTPVKGT*GSINHC
Trigger: ACAGTGATTGATGCTGCCTCAGGTACCTTTGACAGG...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGCCTGTCAAAGGTACCTaGGGCAGCATCAATCACTGT +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLPVKGT*GSINHC
Trigger: ACAGTGATTGATGCTGCCTCAGGTACCTTTGACAGG...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTGCCGCTGGTGGAGCCTaGGCTGTTACTCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGAAGGA*AVTQSL
Trigger: GAGACTCTGAGTAACAGCTCAGGCTCCACCAGCGGC...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCCAGTCGGGAAGAGGCTaGGGGGCTGGCTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPQSGRG*GAGSHW
Trigger: CCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTG...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCCACGGTTTCCTTCACTaGTCAGTACAGGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSHGFLH*SVQDQG
Trigger: ACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTG...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGACACCAACTGCAGCGTaGTTTATTGGACAAGACGTG +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWTPTAA*FIGQDV
Trigger: CACGTCTTGTCCAATAAATCACGCTGCAGTTGGTGT...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTGCCGGTTCGTTTGGTaGTGGTCCCCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLCRFVW*WSPMSL
Trigger: CAATGACATTGGGGACCATCACCAAACGAACCGGCA...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407086.8
ENST00000408905.7
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTGGAAACGGCTCATaGGATTCACTACTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGSGNGS*DSLLVV
Trigger: CACCACGAGTAGTGAATCGCATGAGCCGTTTCCAGA...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGGTGACCCAGAAGGGCTaGTTGATAGACCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVVTQKG*LIDLEQ
Trigger: CTGTTCCAGGTCTATCAAGCAGCCCTTCTGGGTCAC...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTGTTCAGTTTCCCATaGAAGGGTGACCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSLFSFP*KGDPEG
Trigger: CCCTTCTGGGTCACCCTTGCATGGGAAACTGAACAG...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCCTCCGCCCATCGATTTaGTGGGTGAAATTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTLRPSI*WVKFVE
Trigger: CTCCACAAATTTCACCCAGCAAATCGATGGGCGGAG...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCGAGCAGAGGGTGGTTTaGATTAAACGGTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTEQRVV*IKRWLQ
Trigger: TTGCAGCCACCGTTTAATGCAAACCACCCTCTGCTC...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTTCCATGGAGGACATGTaGCGCAGCCCGAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGSMEDM*RSPKPS
Trigger: TGAGGGCTTCGGGCTGCGGCACATGTCCTCCATGGA...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACCTCCGTTCACCCCGTaGTGGAGTGGGGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPPPFTP*WSGADQ
Trigger: TTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGG...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGGAAGGTTTTTACTaGTACGTCAAGGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLGEGFY*YVKGCV
Trigger: GACACAGCCCTTGACGTAGCAGTAAAAACCTTCCCC...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGTTCAAAACACTTCACTaGCACGTGTCTCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLFKTLH*HVSLRG
Trigger: CCCCCTGAGAGACACGTGGCAGTGAAGTGTTTTGAA...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408905.7
ENST00000588462.5
CDS-3UTR CCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCCACACTGGCTTCTCATaGGCAGGGAAGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPHTGFS*AGKWAT
Trigger: TGTGGCCCACTTCCCTGCCCATGAGAAGCCAGTGTG...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGACCCAGCGACAGTCATaGCTGAAGCAGATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVTQRQS*LKQMSC
Trigger: ACAGGACATCTGCTTCAGCCATGACTGTCGCTGGGT...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGAGTCCAGCACTTTTCTaGAAACGGCTCATGCGATTC +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWSPALF*KRLMRF
Trigger: GAATCGCATGAGCCGTTTCCAGAAAAGTGCTGGACT...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTTCACTACCATCAAGCTaGGAAGAGGAGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSSLPSS*EEERAE
Trigger: CTCGGCTCTCTCCTCTTCCCAGCTTGATGGTAGTGA...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGCGCCCATCGATTTGCTaGGTGAAATTTGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGRPSIC*VKFVEE
Trigger: CTCCTCCACAAATTTCACCCAGCAAATCGATGGGCG...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGATCCACAGACGTCTATaGGGTCCAGTGTGTGTTACA +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWIHRRL*GPVCVT
Trigger: TGTAACACACACTGGACCCCATAGACGTCTGTGGAT...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCAAGAGGCTGAGGGGCTaGCTCTCATTGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPKRLRG*LSLVGS
Trigger: GCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTT...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGCTGACCAAGGGAAGCTaGGGGCAGTGTGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRLTKGS*GQCVSQ
Trigger: CTGTGACACACACTGCCCCCAGCTTCCCTTGGTCAG...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCCCTTCCCTAGTACTCTaGGCCTCCGTTCACCCCGTG +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPPSLVL*ASVHPV
Trigger: CACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGG...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTCCTTCCCTAGTACTCTaGGCCTCCGTTCACCCCGTG +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGPSLVL*ASVHPV
Trigger: CACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGG...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAAGCCAGTCGGGAAGAGGCTGAGGGGCTGGCTCTCATTGGTGGGCAGCGGAGAATGCTTTGTTACTGTTaGGTTGCTCACGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: EASREEAEGLALIGGQRRMLCYC*VAHGRW
Trigger: CCAGCGTCCGTGAGCAACCCAACAGTAACAAAGCAT...TCTCCGCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR TCA 90 bp GAAGCCAGTCGGGAAGAGGCTGAGGGGCTGGCTCTCATTGGTGGGCAGCGGAGACTCCCCAGTACGAAGTaGATACAGATCCACACAACA +
Preference number: 4 (lower is better)
Translates to: EASREEAEGLALIGGQRRLPSTK*IQIHTT
Trigger: TGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAG...TCTCCGCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR TCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGCAAGGGTGTCTGTTGTaGCTAGAAGCATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGQGCLL*LEAFHL
Trigger: CAAGTGGAATGCTTCTAGTCACAACAGACACCCTTG...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCAGCGACAGTCATGGCTaGAGCAGATGTCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLSDSHG*SRCPVL
Trigger: AAGTACAGGACATCTGCTTCAGCCATGACTGTCGCT...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTACCCCGGAGAGTACTaGCCACAACCCAGCGACAGT +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPYPGEY*PQPSDS
Trigger: ACTGTCGCTGGGTTGTGGTCAGTACTCTCCGGGGTA...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTTACCCCGGAGAGTACTaGCCACAACCCAGCGACAGT +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGYPGEY*PQPSDS
Trigger: ACTGTCGCTGGGTTGTGGTCAGTACTCTCCGGGGTA...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGCATCGATTTGCTGGGTaGAATTTGTGGAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWHRFAG*NLWRRF
Trigger: AAACCTCCTCCACAAATTTCACCCAGCAAATCGATG...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCAGGGATGGATGGTTTTaGACTGGAACTGTGGACCCA +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSRDGWF*TGTVDP
Trigger: TGGGTCCACAGTTCCAGTTCAAAACCATCCATCCCT...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCAGGGATGGATGGTTTTaGACTGGAACTGTGGACCCA +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLRDGWF*TGTVDP
Trigger: TGGGTCCACAGTTCCAGTTCAAAACCATCCATCCCT...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCGTGTCACTCGGACCATaGGACTGCAACACAGATGAA +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSVSLGP*DCNTDE
Trigger: TTCATCTGTGTTGCAGTCTCATGGTCCGAGTGACAC...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GGGGCTGGCCAGTCAGAAGCAGGTTGCTGGTACCTACGGGAAGCCAGTCGGGAAGTGTCACTCGGACCATaGGACTGCAACACAGATGAA +
Preference number: 4 (lower is better)
Translates to: GAGQSEAGCWYLREASREVSLGP*DCNTDE
Trigger: TTCATCTGTGTTGCAGTCTCATGGTCCGAGTGACAC...TTCCCGACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTGGCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR TCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCCTGTCAAAGGTACCTaGGGCAGCATCAATCACTGT +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSPVKGT*GSINHC
Trigger: ACAGTGATTGATGCTGCCTCAGGTACCTTTGACAGG...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GGGGCTGGCCAGTCAGAAGCAGGTTGCTGGTACCTACGGGAAGCCAGTCGGGAACCTGTCAAAGGTACCTaGGGCAGCATCAATCACTGT +
Preference number: 4 (lower is better)
Translates to: GAGQSEAGCWYLREASREPVKGT*GSINHC
Trigger: ACAGTGATTGATGCTGCCTCAGGTACCTTTGACAGG...TTCCCGACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTGGCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR TCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTGACGTCCCGGCTAGGTaGCTCGGCCATGGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGDVPAR*LGHGVG
Trigger: GCCGACGCCATGGCCGAGTCACCTAGCCGGGACGTC...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGCATGAGCTGAGGCTGTaGCTGTCCACTCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRHELRL*LSTQGQ
Trigger: TTGACCCTGAGTGGACAGTCACAGCCTCAGCTCATG...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGAGAGAAGAGCTCTTGTaGTTCACCACTGATAGGGAT +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWREELL*FTTDRD
Trigger: ATCCCTATCAGTGGTGAAGCACAAGAGCTCTTCTCT...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGTGCCAGAAGATCCAATaGTCTTACAAACACCAAGGA +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGCQKIQ*SYKHQG
Trigger: TCCTTGGTGTTTGTAAGAGCATTGGATCTTCTGGCA...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGCAGCAATTTTCTCCTaGAAGACTACGACAAGGATC +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWAAIFS*KTTTRI
Trigger: GATCCTTGTCGTAGTCTTGCAGGAGAAAATTGCTGC...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTCTGGAAACGGCTCATaGGATTCACTACTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLSGNGS*DSLLVV
Trigger: CACCACGAGTAGTGAATCGCATGAGCCGTTTCCAGA...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCCTCCGCCCATCGATTTaGTGGGTGAAATTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSLRPSI*WVKFVE
Trigger: CTCCACAAATTTCACCCAGCAAATCGATGGGCGGAG...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGCTCCGCCCATCGATTTaGTGGGTGAAATTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVLRPSI*WVKFVE
Trigger: CTCCACAAATTTCACCCAGCAAATCGATGGGCGGAG...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTGTCACTAATCTTGGGTaGAGTGCTGAGGGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGVTNLG*SAEGSR
Trigger: CCGCGACCCCTCAGCACTGCACCCAAGATTAGTGAC...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCCTGATAATACTGTACTaGATCTGCAGCGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTLIILY*ICSEEQ
Trigger: CTGCTCCTCGCTGCAGATGCAGTACAGTATTATCAG...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGCTGATAATACTGTACTaGATCTGCAGCGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGLIILY*ICSEEQ
Trigger: CTGCTCCTCGCTGCAGATGCAGTACAGTATTATCAG...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGGCAAGTGCGCTGAGGTaGTTGGAGAAGGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRASALR*LEKGLF
Trigger: GAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGC...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTTCTAGCCGCTCGAATTaGGCCATGTCGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSSSRSN*AMSNRE
Trigger: TTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGA...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCTCATGGGCAGGGAAGTaGGCCACAATGCCATCACTG +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPSWAGK*ATMPSL
Trigger: CAGTGATGGCATTGTGGCCCACTTCCCTGCCCATGA...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CTACGGGAAGCCAGTCGGGAAGAGGCTGAGGGGCTGGCTCTCATTGGTGGGCAGAGTCCAGCACTTTTCTaGAAACGGCTCATGCGATTC +
Preference number: 4 (lower is better)
Translates to: LREASREEAEGLALIGGQSPALF*KRLMRF
Trigger: GAATCGCATGAGCCGTTTCCAGAAAAGTGCTGGACT...CTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTGGCTTCCCGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR CCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGGGTCCCCAATGTCATTaGCTGCTTGATTTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGGPQCH*LLDLCK
Trigger: CTTGCACAAATCAAGCAGCCAATGACATTGGGGACC...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAAGCCAGTCGGGAAGAGGCTGAGGGGCTGGCTCTCATTGGTGGGCAGCGGAGAGGTCCCCAATGTCATTaGCTGCTTGATTTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: EASREEAEGLALIGGQRRGPQCH*LLDLCK
Trigger: CTTGCACAAATCAAGCAGCCAATGACATTGGGGACC...TCTCCGCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR CCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCCGCCCATCGATTTGCTaGGTGAAATTTGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLRPSIC*VKFVEE
Trigger: CTCCTCCACAAATTTCACCCAGCAAATCGATGGGCG...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCGCGAGGAGCAGAGGGTaGTTTGCATTAAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPARSRG*FALNGG
Trigger: GCCACCGTTTAATGCAAACCACCCTCTGCTCCTCGC...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGGCGAGGAGCAGAGGGTaGTTTGCATTAAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRARSRG*FALNGG
Trigger: GCCACCGTTTAATGCAAACCACCCTCTGCTCCTCGC...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGGTTTGGCCTGAGGGATaGATGGTTTTGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGVWPEG*MVLNWN
Trigger: GTTCCAGTTCAAAACCATCCATCCCTCAGGCCAAAC...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCGGGGTCAGAGCGGACTaGCTGGATCCTGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPGVRAD*LDPETV
Trigger: AACAGTCTCAGGATCCAGCCAGTCCGCTCTGACCCC...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGCAGCATCAATCACTGTaGAAACTCCCCTTCGATCAG +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGQHQSL*KLPFDQ
Trigger: CTGATCGAAGGGGAGTTTCCACAGTGATTGATGCTG...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTGCCATCAAAGTTTCTTaGTATGCTGCCGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSAIKVS*YAAAGG
Trigger: TCCACCAGCGGCAGCATACCAAGAAACTTTGATGGC...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCGCCATCAAAGTTTCTTaGTATGCTGCCGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLAIKVS*YAAAGG
Trigger: TCCACCAGCGGCAGCATACCAAGAAACTTTGATGGC...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCGCTGGCTCTCATTGGTaGGCAGCGGAGATCGGTAGC +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPAGSHW*AAEIGS
Trigger: GCTACCGATCTCCGCTGCCCACCAATGAGAGCCAGC...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAGCTGGCTCTCATTGGTaGGCAGCGGAGATCGGTAGC +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPAGSHW*AAEIGS
Trigger: GCTACCGATCTCCGCTGCCCACCAATGAGAGCCAGC...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCCACTCAGGGTCAAAATaGCCAGGTGGACGATCAACT +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSHSGSK*PGGRST
Trigger: AGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCGTTGCTCACGGACGCTaGGCTGTTGGCATTGTTTTT +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLVAHGR*AVGIVF
Trigger: AAAAACAATGCCAACAGCCCAGCGTCCGTGAGCAAC...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR TCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCAGTGTGCCTGTCAGCTaGGTCACCACTTTCCCTACC +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPSVPVS*VTTFPT
Trigger: GGTAGGGAAAGTGGTGACTCAGCTGACAGGCACACT...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGCAAAGGACTCCGCCGTaGATTACTGTGGATGGCAAC +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRQRTPP*ITVDGN
Trigger: GTTGCCATCCACAGTAATTCACGGCGGAGTCCTTTG...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCCAAAGGACTCCGCCGTaGATTACTGTGGATGGCAAC +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPQRTPP*ITVDGN
Trigger: GTTGCCATCCACAGTAATTCACGGCGGAGTCCTTTG...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCGATGAGGACCAAGGATaGGTCAGAATTTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTDEDQG*VRIWKT
Trigger: TGTCTTCCAAATTCTGACTCATCCTTGGTCCTCATC...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGTCAGTTTCTCCCCTGTaGAGAGTATACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVSVSPL*RVYRWW
Trigger: CCACCATCTGTATACTCTTCACAGGGGAGAAACTGA...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCATACCCCGGAGAGTACTaGCCACAACCCAGCGACAGT +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPYPGEY*PQPSDS
Trigger: ACTGTCGCTGGGTTGTGGTCAGTACTCTCCGGGGTA...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGGGATTATTTGCAAACCATaGCCTGGATGTTCCGAAGAT +
Preference number: 4 (lower is better)
Translates to: SGPPFTPCWSGADQGKLGIICKP*PGCSED
Trigger: ATCTTCGGAACATCCAGGTCATGGTTTGCAAATAAT...CCCCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCTCATTGGTGGGCAGCGGAGATCGGTAGCCATCAAAGTTTCTTGGTATGCTGCTCTTGGGTGCAGTGCTaGGGGGTCGCGGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: SHWWAAEIGSHQSFLVCCSWVQC*GVAAPS
Trigger: TGATGGAGCCGCGACCCCTCAGCACTGCACCCAAGA...GCAGCATACCAAGAAACTTTGATGGCTACCGATCTCCGCTGCCCACCAATGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR TCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGTGCAATTCATTCCATTaGGGGGTTCTAACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLCNSFH*GVLTRV
Trigger: GACTCTGGTTAGAACCCCTCAATGGAATGAATTGCA...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTGACGTCCCGGCTAGGTaGCTCGGCCATGGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSDVPAR*LGHGVG
Trigger: GCCGACGCCATGGCCGAGTCACCTAGCCGGGACGTC...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTGACGTCCCGGCTAGGTaGCTCGGCCATGGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSDVPAR*LGHGVG
Trigger: GCCGACGCCATGGCCGAGTCACCTAGCCGGGACGTC...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTATGCTTCCCTCTCGCTaGAGTTCTGTTCCGGATCCC +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGMLPSR*SSVPDP
Trigger: GGGATCCGGAACAGAACTTCAGCGAGAGGGAAGCAT...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000588874.5
CDS-3UTR TCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACAGCCAGACATGAGCTaGGGCTGTGACTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPQPDMS*GCDCPL
Trigger: GAGTGGACAGTCACAGCCTCAGCTCATGTCTGGCTG...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGGCAGCAATTTTCTCCTaGAAGACTACGACAAGGATC +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGAAIFS*KTTTRI
Trigger: GATCCTTGTCGTAGTCTTGCAGGAGAAAATTGCTGC...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTACAGCGACCTCCTTaGTTAGACGTCAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSLQRPP*LDVSSC
Trigger: ACAAGAACTGACGTCTAAGCAAGGAGGTCGCTGTAG...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCCTACAGCGACCTCCTTaGTTAGACGTCAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSLQRPP*LDVSSC
Trigger: ACAAGAACTGACGTCTAAGCAAGGAGGTCGCTGTAG...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCCTACAGCGACCTCCTTaGTTAGACGTCAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLLQRPP*LDVSSC
Trigger: ACAAGAACTGACGTCTAAGCAAGGAGGTCGCTGTAG...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCCCAATGTCATTGGCTaGTTGATTTGTGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSPNVIG*LICARG
Trigger: GCCTCTTGCACAAATCAAGCAGCCAATGACATTGGG...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAGTCACTAATCTTGGGTaGAGTGCTGAGGGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPVTNLG*SAEGSR
Trigger: CCGCGACCCCTCAGCACTGCACCCAAGATTAGTGAC...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGATACTGTACTGCATCTaGAGCGAGGAGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRILYCI*SEEQRV
Trigger: CACCCTCTGCTCCTCGCTGCAGATGCAGTACAGTAT...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GGGGCTGGCCAGTCAGAAGCAGGTTGCTGGTACCTACGGGAAGCCAGTCGGGAACTGATAATACTGTACTaGATCTGCAGCGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GAGQSEAGCWYLREASRELIILY*ICSEEQ
Trigger: CTGCTCCTCGCTGCAGATGCAGTACAGTATTATCAG...TTCCCGACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTGGCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR GCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCTACTCAGAGTCTCGATaGTTCCCTCTCGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSYSESR*FPLAEV
Trigger: AACTTCAGCGAGAGGGAAGCATCGAGACTCTGAGTA...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTACTCAGAGTCTCGATaGTTCCCTCTCGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLYSESR*FPLAEV
Trigger: AACTTCAGCGAGAGGGAAGCATCGAGACTCTGAGTA...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCGCAAGTGCGCTGAGGTaGTTGGAGAAGGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPASALR*LEKGLF
Trigger: GAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGC...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCATGCAGGATGTCATATaGAAACATACACAGGGACCG +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTMQDVI*KHTQGP
Trigger: CGGTCCCTGTGTATGTTTGCATATGACATCCTGCAT...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCTTATTGGACAAGACGTaGACTTTTCAACAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTLLDKT*TFQQGL
Trigger: GAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAA...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGTTATTGGACAAGACGTaGACTTTTCAACAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLLLDKT*TFQQGL
Trigger: GAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAA...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCTGCTCTGTGACAGCCTaGGGGCGAACCACAACTCCA +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPCSVTA*GRTTTP
Trigger: TGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCA...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCTCCACTGTAAGCCTGTaGCACAACATCCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSSTVSL*HNILQK
Trigger: TTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGGA...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGGAATAGGATTCATGTTTaGCCCTGGACATGGATAGCA +
Preference number: 4 (lower is better)
Translates to: TLGLRSPRAGVGLTKGSWNRIHV*PWTWIA
Trigger: TGCTATCCATGTCCAGGGCCAAACATGAATCCTATT...CCAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCCGCCGTGAATTACTGTaGATGGCAACATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTRRELL*MATSSS
Trigger: AGAAGATGATGTTGCCATCCACAGTAATTCACGGCG...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTAACTGTGATGATGCCTaGGACCAAAGGACTCCGCCG +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGNCDDA*DQRTPP
Trigger: CGGCGGAGTCCTTTGGTCCCAGGCATCATCACAGTT...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTTCACTCACAAGCACCTaGCCCTCTCCAACGGTTTCG +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGSLTST*PSPTVS
Trigger: CGAAACCGTTGGAGAGGGCCAGGTGCTTGTGAGTGA...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAGATGTCCTGTACTTTaGCTTCAGTTTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTRCPVL*LQFLPC
Trigger: ACAGGGGAGAAACTGAAGCCAAAGTACAGGACATCT...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTGGTCCCCAATGTCATTaGCTGCTTGATTTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSGPQCH*LLDLCK
Trigger: CTTGCACAAATCAAGCAGCCAATGACATTGGGGACC...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGTTTGAACTGGAACTGTaGACCCATCCACAGACGTCT +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVFELEL*THPQTS
Trigger: AGACGTCTGTGGATGGGTCCACAGTTCCAGTTCAAA...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGTGGATGGTTTTGAACTaGAACTGTGGACCCATCCAC +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVWMVLN*NCGPIH
Trigger: GTGGATGGGTCCACAGTTCCAGTTCAAAACCATCCA...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCTGGATGGTTTTGAACTaGAACTGTGGACCCATCCAC +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSWMVLN*NCGPIH
Trigger: GTGGATGGGTCCACAGTTCCAGTTCAAAACCATCCA...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCGAGATAACTGTGGTTTaGCCTGAGGGATGGATGGTT +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLEITVV*PEGWMV
Trigger: AACCATCCATCCCTCAGGCCAAACCACAGTTATCTC...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGGAGATAACTGTGGTTTaGCCTGAGGGATGGATGGTT +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVEITVV*PEGWMV
Trigger: AACCATCCATCCCTCAGGCCAAACCACAGTTATCTC...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGATCCAAAAGAGGCTGTaGCGTGTCACTCGGACCATG +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRIQKRL*RVTRTM
Trigger: CATGGTCCGAGTGACACGCCACAGCCTCTTTTGGAT...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCGGGGTCAGAGCGGACTaGCTGGATCCTGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPGVRAD*LDPETV
Trigger: AACAGTCTCAGGATCCAGCCAGTCCGCTCTGACCCC...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCGTATGCTGCCGCTGGTaGAGCCTGAGCTGTTACTCA +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPVCCRW*SLSCYS
Trigger: TGAGTAACAGCTCAGGCTCCACCAGCGGCAGCATAC...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTTGGTATGCTGCCGCTaGTGGAGCCTGAGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPLVCCR*WSLSCY
Trigger: GTAACAGCTCAGGCTCCACCAGCGGCAGCATACCAA...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGTCAGAAGCAGGTTGCTaGTACCTACGGGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRSEAGC*YLREAS
Trigger: ACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGA...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGGTCAAAATGGCCAGGTaGACGATCAACTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRVKMAR*TINSVP
Trigger: GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGAC...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GGTGGGCAGCGGAGATCGGTAGCCATCAAAGTTTCTTGGTATGCTGCCGCTGGTATCTTCTGTCACACCTaGAGGCAGTGTGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GGQRRSVAIKVSWYAAAGIFCHT*RQCACQ
Trigger: CTGACAGGCACACTGCCTTCAGGTGTGACAGAAGAT...ACCAGCGGCAGCATACCAAGAAACTTTGATGGCTACCGATCTCCGCTGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR TCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCAGAATTTGGAAGACATaGAAGTCATGGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLRIWKT*KSWPRV
Trigger: CACCCTTGGCCATGACTTTCATGTCTTCCAAATTCT...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GGGGCTGGCCAGTCAGAAGCAGGTTGCTGGTACCTACGGGAAGCCAGTCGGGAAGATGAGGACCAAGGATaGGTCAGAATTTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: GAGQSEAGCWYLREASREDEDQG*VRIWKT
Trigger: TGTCTTCCAAATTCTGACTCATCCTTGGTCCTCATC...TTCCCGACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTGGCCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR TCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCCATCGATTTGCTGGGTaGAATTTGTGGAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSHRFAG*NLWRRF
Trigger: AAACCTCCTCCACAAATTTCACCCAGCAAATCGATG...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTGCAATTCATTCCATTaGGGGGTTCTAACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLCNSFH*GVLTRV
Trigger: GACTCTGGTTAGAACCCCTCAATGGAATGAATTGCA...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCAGAGGGCAAGTGCGCTaGGGTGCTTGGAGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLARGQVR*GAWRRV
Trigger: GACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCT...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGGACAAACTCTTCCCATaGACAGATGGGGAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVDKLFP*TDGERK
Trigger: CTTTCTTTCCCCATCTGTTCATGGGAAGAGTTTGTC...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGTGCCAGAAGATCCAATaGTCTTACAAACACCAAGGA +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLCQKIQ*SYKHQG
Trigger: TCCTTGGTGTTTGTAAGAGCATTGGATCTTCTGGCA...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGTCTGGAAACGGCTCATaGGATTCACTACTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRSGNGS*DSLLVV
Trigger: CACCACGAGTAGTGAATCGCATGAGCCGTTTCCAGA...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCTCTGGAAACGGCTCATaGGATTCACTACTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPSGNGS*DSLLVV
Trigger: CACCACGAGTAGTGAATCGCATGAGCCGTTTCCAGA...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CTGGCCAGTCAGAAGCAGGTTGCTGGTACCTACGGGAAGCCAGTCGGGAAGAGGTACTCAGAGTCTCGATaGTTCCCTCTCGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LASQKQVAGTYGKPVGKRYSESR*FPLAEV
Trigger: AACTTCAGCGAGAGGGAAGCATCGAGACTCTGAGTA...CCTCTTCCCGACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR GCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAAGTTTCTTGGTATGCTaGCGCTGGTGGAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPSFLVC*RWWSLS
Trigger: GCTCAGGCTCCACCAGCGGCAGCATACCAAGAAACT...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAGTTTCTTGGTATGCTaGCGCTGGTGGAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPSFLVC*RWWSLS
Trigger: GCTCAGGCTCCACCAGCGGCAGCATACCAAGAAACT...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTCAAAGTTTCTTGGTATaGTGCCGCTGGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGQSFLV*CRWWSL
Trigger: CAGGCTCCACCAGCGGCAGCATACCAAGAAACTTTG...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACAGTCAGAAGCAGGTTaGTGGTACCTACGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPQSEAG*WYLREA
Trigger: GGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTG...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCATGCAGGATGTCATATaGAAACATACACAGGGACCG +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLMQDVI*KHTQGP
Trigger: CGGTCCCTGTGTATGTTTGCATATGACATCCTGCAT...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGCCTCCGTTCACCCCGTaGTGGAGTGGGGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRPPFTP*WSGADQ
Trigger: TTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGG...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTTTATTGGACAAGACGTaGACTTTTCAACAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSLLDKT*TFQQGL
Trigger: GAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAA...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCTTATTGGACAAGACGTaGACTTTTCAACAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSLLDKT*TFQQGL
Trigger: GAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAA...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCCACCAGTACAACGACTaGGTCTTCTTGGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPHQYND*VFLGNL
Trigger: CAGATTCCCCAAGAAGACCCAGTCGTTGTACTGGTG...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTCACACAACAGTACGGTaGGCTTGTGCCAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGHTTVR*ACARRS
Trigger: GGATCTTCTGGCACAAGCCCACCGTACTGTTGTGTG...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCGCCGTGAATTACTGTaGATGGCAACATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: PPTGVAEGKCAEVLGEGSRRELL*MATSSS
Trigger: AGAAGATGATGTTGCCATCCACAGTAATTCACGGCG...AGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCTCATGGGCAGGGAAGTaGGCCACAATGCCATCACTG +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPSWAGK*ATMPSL
Trigger: CAGTGATGGCATTGTGGCCCACTTCCCTGCCCATGA...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTTCACTACCATCAAGCTaGGAAGAGGAGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGSLPSS*EEERAE
Trigger: CTCGGCTCTCTCCTCTTCCCAGCTTGATGGTAGTGA...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCCGCCCATCGATTTGCTaGGTGAAATTTGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPRPSIC*VKFVEE
Trigger: CTCCTCCACAAATTTCACCCAGCAAATCGATGGGCG...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTCTTCCTGTCCACTATaGTCAGAAGCTAAACTGTCG +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLSSCPL*SEAKLS
Trigger: CGACAGTTTAGCTTCTGACCATAGTGGACAGGAAGA...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GGTGGGCAGCGGAGATCGGTAGCCATCAAAGTTTCTTGGTATGCTGCCGCTGGTTCAGAGCGGACTGGCTaGATCCTGAGACTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: GGQRRSVAIKVSWYAAAGSERTG*ILRLLR
Trigger: TCTCAACAGTCTCAGGATCCAGCCAGTCCGCTCTGA...ACCAGCGGCAGCATACCAAGAAACTTTGATGGCTACCGATCTCCGCTGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR CCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGCCTCCGTGTGCTCCATaGAGGACATGTGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRPPCAP*RTCAAA
Trigger: GGCTGCGGCACATGTCCTCCATGGAGCACACGGAGG...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCATTCTACAGTCTCTCCTaGCCACAGCCTCCACCGACA +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPFYSLS*PQPPPT
Trigger: TGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAA...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCACCGTTCACCCCGTGCTaGAGTGGGGCTGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASPFTPC*SGADQG
Trigger: CCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGG...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACCGTTCACCCCGTGCTaGAGTGGGGCTGACCAAGGG +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLPFTPC*SGADQG
Trigger: CCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGG...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCAAGGGAAGCTGTGCAGCGTGATTTATTaGACAAGACGTGCACTTTTC +
Preference number: 4 (lower is better)
Translates to: YSGPPFTPCWSGADQGKLCSVIY*TRRALF
Trigger: GAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCA...CAGCTTCCCTTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCTGCAGCGTGATTTATTaGACAAGACGTGCACTTTTC +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTCSVIY*TRRALF
Trigger: GAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCA...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CCTATCAGCTGCTTCCTGGAAGCCTTTCTCACTAATGTCCTTTCTCTGCTCCAGTGTAGGACTGCTCTGTaGCAGCCTGGGGGCGAACCA +
Preference number: 4 (lower is better)
Translates to: PISCFLEAFLTNVLSLLQCRTAL*QPGGEP
Trigger: TGGTTCGCCCCCAGGCTGTCACAGAGCAGTCCTACA...CTGGAGCAGAGAAAGGACATTAGTGAGAAAGGCTTCCAGGAAGCAGCTGATAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588532.5
CDS-3UTR TCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAATCTTCTGTCACACCTaGAGGCAGTGTGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPIFCHT*RQCACQ
Trigger: CTGACAGGCACACTGCCTTCAGGTGTGACAGAAGAT...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGCAAGGGTGTCTGTTGTaGCTAGAAGCATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRQGCLL*LEAFHL
Trigger: CAAGTGGAATGCTTCTAGTCACAACAGACACCCTTG...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCTCAGTTTCTCCCCTGTaGAGAGTATACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPSVSPL*RVYRWW
Trigger: CCACCATCTGTATACTCTTCACAGGGGAGAAACTGA...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCTACCCCGGAGAGTACTaGCCACAACCCAGCGACAGT +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLAYPGEY*PQPSDS
Trigger: ACTGTCGCTGGGTTGTGGTCAGTACTCTCCGGGGTA...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGATTCACTACTCGTGGTaGCATATGTGTACGAACACA +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVIHYSW*HMCTNT
Trigger: TGTGTTCGTACACATATGTCACCACGAGTAGTGAAT...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACATCTTGGGTGCAGTGCTaGGGGGTCGCGGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTSWVQC*GVAAPS
Trigger: TGATGGAGCCGCGACCCCTCAGCACTGCACCCAAGA...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCAACTGTGGTTTGGCCTaGGGGATGGATGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPNCGLA*GMDGFE
Trigger: TTCAAAACCATCCATCCCTCAGGCCAAACCACAGTT...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGAACTGTGGTTTGGCCTaGGGGATGGATGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRNCGLA*GMDGFE
Trigger: TTCAAAACCATCCATCCCTCAGGCCAAACCACAGTT...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTATGACCCTGGCATGCTaGCGGGGTCAGAGCGGACTG +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGMTLAC*RGQSGL
Trigger: CAGTCCGCTCTGACCCCGTCAGCATGCCAGGGTCAT...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAAGAGACTGGACGGGATaGCCCTGGCATGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASRDWTG*PWHADG
Trigger: CCCGTCAGCATGCCAGGGTCATCCCGTCCAGTCTCT...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTCCTGTCAAAGGTACCTaGGGCAGCATCAATCACTGT +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGPVKGT*GSINHC
Trigger: ACAGTGATTGATGCTGCCTCAGGTACCTTTGACAGG...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCCACGGTTTCCTTCACTaGTCAGTACAGGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPHGFLH*SVQDQG
Trigger: ACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTG...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCACACCAACTGCAGCGTaGTTTATTGGACAAGACGTG +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPTPTAA*FIGQDV
Trigger: CACGTCTTGTCCAATAAATCACGCTGCAGTTGGTGT...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAGTGACCCAGAAGGGCTaGTTGATAGACCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPVTQKG*LIDLEQ
Trigger: CTGTTCCAGGTCTATCAAGCAGCCCTTCTGGGTCAC...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGTCCATGGAGGACATGTaGCGCAGCCCGAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRSMEDM*RSPKPS
Trigger: TGAGGGCTTCGGGCTGCGGCACATGTCCTCCATGGA...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGTACTCAGAGTCTCGATaGTTCCCTCTCGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRYSESR*FPLAEV
Trigger: AACTTCAGCGAGAGGGAAGCATCGAGACTCTGAGTA...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACAAAGTTTCTTGGTATaGTGCCGCTGGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPQSFLV*CRWWSL
Trigger: CAGGCTCCACCAGCGGCAGCATACCAAGAAACTTTG...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCTCCACTGTAAGCCTGTaGCACAACATCCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPSTVSL*HNILQK
Trigger: TTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGGA...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCAATAGGATTCATGTTTaGCCCTGGACATGGATAGCA +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSNRIHV*PWTWIA
Trigger: TGCTATCCATGTCCAGGGCCAAACATGAATCCTATT...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGAATAGGATTCATGTTTaGCCCTGGACATGGATAGCA +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVNRIHV*PWTWIA
Trigger: TGCTATCCATGTCCAGGGCCAAACATGAATCCTATT...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CCTCCACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTGTCATCATTTCCAGTaGTGTGTCGTCACTAATCTT +
Preference number: 4 (lower is better)
Translates to: PPPTGVAEGKCAEVLGEGCHHFQ*CVVTNL
Trigger: AAGATTAGTGACGACACACCACTGGAAATGATGACA...CCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCTTCCCTAGTACTCTGGGCCTCCGTTCACCCCGTGCTGGAGTGGGGCTGACCGTTTGCATTAAACGGTaGCTGCAATTCATTCCATTG +
Preference number: 4 (lower is better)
Translates to: SFPSTLGLRSPRAGVGLTVCIKR*LQFIPL
Trigger: CAATGGAATGAATTGCAGCCACCGTTTAATGCAAAC...GGTCAGCCCCACTCCAGCACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCGGGGTCAGAGCGGACTaGCTGGATCCTGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLAGVRAD*LDPETV
Trigger: AACAGTCTCAGGATCCAGCCAGTCCGCTCTGACCCC...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATCTCCACCGACAGGTGTaGCAGAGGGCAAGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDLHRQV*QRASAL
Trigger: CAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAG...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGCCTTCCCTAGTACTCTaGGCCTCCGTTCACCCCGTG +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRPSLVL*ASVHPV
Trigger: CACGGGGTGAACGGAGGCCCAGAGTACTAGGGAAGG...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
3UTR CAA 72 bp CGCTCGAATTGGGCCATGTCGAACAGAGAAGAGCTCTaGTGCTTCACCACTGATAGGGATGCTCCAGACCTG +
Preference number: 4 (lower is better)
Translates to: RSNWAMSNREEL*CFTTDRDAPDL
Trigger: CAGGTCTGGAGCATCCCTATCAGTGGTGAAGCACAAGAGCTCTTCTCTGTTCGACATGGCCCAATTCGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586241.1
ENST00000591147.5
ENST00000592848.5
CDS-3UTR TCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACTACCCCGGAGAGTACTaGCCACAACCCAGCGACAGT +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYYPGEY*PQPSDS
Trigger: ACTGTCGCTGGGTTGTGGTCAGTACTCTCCGGGGTA...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCGGCCACCATAAGGGTTaGTGGGGAAAACGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLAGHHKG*WGKRGK
Trigger: CTTCCCACGTTTTCCCCATCAACCCTTATGGTGGCC...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCTTGGGTGCAGTGCTaGGGGGTCGCGGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVSWVQC*GVAAPS
Trigger: TGATGGAGCCGCGACCCCTCAGCACTGCACCCAAGA...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGTGCAATTCATTCCATTaGGGGGTTCTAACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRCNSFH*GVLTRV
Trigger: GACTCTGGTTAGAACCCCTCAATGGAATGAATTGCA...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTAGAGACTGGACGGGATaGCCCTGGCATGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSRDWTG*PWHADG
Trigger: CCCGTCAGCATGCCAGGGTCATCCCGTCCAGTCTCT...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTAGCCGCTGGTGGAGCCTaGGCTGTTACTCAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLAAGGA*AVTQSL
Trigger: GAGACTCTGAGTAACAGCTCAGGCTCCACCAGCGGC...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCAGTCGGGAAGAGGCTaGGGGGCTGGCTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSQSGRG*GAGSHW
Trigger: CCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTG...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTAAGAGGGCAAGTGCGCTaGGGTGCTTGGAGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLRGQVR*GAWRRV
Trigger: GACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCT...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAAGAGGGCAAGTGCGCTaGGGTGCTTGGAGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTRGQVR*GAWRRV
Trigger: GACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCT...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGCAGCCAGACATGAGCTaGGGCTGTGACTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRQPDMS*GCDCPL
Trigger: GAGTGGACAGTCACAGCCTCAGCTCATGTCTGGCTG...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCTCTGGAAACGGCTCATaGGATTCACTACTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPSGNGS*DSLLVV
Trigger: CACCACGAGTAGTGAATCGCATGAGCCGTTTCCAGA...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGTGGCTGCTTGATTTGTaGAAGAGGCATCACTACCAT +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRWLLDL*KRHHYH
Trigger: ATGGTAGTGATGCCTCTTGCACAAATCAAGCAGCCA...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAAGGCCCTCCTCCGTGTaGTCCATGGAGGACATGTGC +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASRPSSV*SMEDMC
Trigger: GCACATGTCCTCCATGGAGCACACGGAGGAGGGCCT...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTAAGGCCCTCCTCCGTGTaGTCCATGGAGGACATGTGC +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLRPSSV*SMEDMC
Trigger: GCACATGTCCTCCATGGAGCACACGGAGGAGGGCCT...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTCCGTTCACCCCGTaGTGGAGTGGGGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSPPFTP*WSGADQ
Trigger: TTGGTCAGCCCCACTCCAGCACGGGGTGAACGGAGG...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTCAGGCCCTTATTGGACAAGACGTaGACTTTTCAACAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: HSGSKWPGGRSTLSPLRPLLDKT*TFQQGL
Trigger: GAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAA...GGGCCTGAGTGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GATTCTAGCCGCTCGAATTGGGCCATGTCGAACAGAGAAGAGCTCTTGTGCTTCACCCAACCTATCAGCTaGTTCCTGGAAGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: DSSRSNWAMSNREELLCFTQPIS*FLEACG
Trigger: GCCACAGGCTTCCAGGAAGCAGCTGATAGGTTGGGT...GAAGCACAAGAGCTCTTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591147.5
CDS-3UTR CCA 90 bp CCTATCAGCTGCTTCCTGGAAGCCTTTCTCACTAATGTCCTTTCTCTGCTCCAGTGCTCTGTGACAGCCTaGGGGCGAACCACAACTCCA +
Preference number: 4 (lower is better)
Translates to: PISCFLEAFLTNVLSLLQCSVTA*GRTTTP
Trigger: TGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCA...CTGGAGCAGAGAAAGGACATTAGTGAGAAAGGCTTCCAGGAAGCAGCTGATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588532.5
CDS-3UTR CCA 90 bp AAGATTCTAGCCGCTCGAATTGGGCCATGTCGAACAGAGAAGAGCTCTTGTGCTTGCTCTGTGACAGCCTaGGGGCGAACCACAACTCCA +
Preference number: 4 (lower is better)
Translates to: KILAARIGPCRTEKSSCACSVTA*GRTTTP
Trigger: TGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCA...AGCACAAGAGCTCTTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591147.5
ENST00000592848.5
CDS-3UTR CCA 90 bp CAACAGTACGGTGGGCTTGTGCCAGAAGATCCAATGCTCTTACAAACACCAAGGTGCTCTGTGACAGCCTaGGGGCGAACCACAACTCCA +
Preference number: 4 (lower is better)
Translates to: QQYGGLVPEDPMLLQTPRCSVTA*GRTTTP
Trigger: TGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCA...CCTTGGTGTTTGTAAGAGCATTGGATCTTCTGGCACAAGCCCACCGTACTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592848.5
CDS-3UTR CCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTTCCACTGTAAGCCTGTaGCACAACATCCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGSTVSL*HNILQK
Trigger: TTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGGA...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCTCTAGCCGCTCGAATTaGGCCATGTCGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPSSRSN*AMSNRE
Trigger: TTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGA...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGCACACTGGCTTCTCATaGGCAGGGAAGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRHTGFS*AGKWAT
Trigger: TGTGGCCCACTTCCCTGCCCATGAGAAGCCAGTGTG...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCAGCCATGCAGCACACTaGCTTCTCATGGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLASHAAH*LLMGRE
Trigger: TTCCCTGCCCATGAGAAGCCAGTGTGCTGCATGGCT...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTAGTCCAGCACTTTTCTaGAAACGGCTCATGCGATTC +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGSPALF*KRLMRF
Trigger: GAATCGCATGAGCCGTTTCCAGAAAAGTGCTGGACT...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCAGTCCAGCACTTTTCTaGAAACGGCTCATGCGATTC +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPSPALF*KRLMRF
Trigger: GAATCGCATGAGCCGTTTCCAGAAAAGTGCTGGACT...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACGCCCATCGATTTGCTaGGTGAAATTTGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPRPSIC*VKFVEE
Trigger: CTCCTCCACAAATTTCACCCAGCAAATCGATGGGCG...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTGTCATCATTTCCAGTaGTGTGTCGTCACTAATCTT +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLCHHFQ*CVVTNL
Trigger: AAGATTAGTGACGACACACCACTGGAAATGATGACA...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCGCGAGGAGCAGAGGGTaGTTTGCATTAAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLAARSRG*FALNGG
Trigger: GCCACCGTTTAATGCAAACCACCCTCTGCTCCTCGC...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTGGATGGTTTTGAACTaGAACTGTGGACCCATCCAC +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPWMVLN*NCGPIH
Trigger: GTGGATGGGTCCACAGTTCCAGTTCAAAACCATCCA...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTGTTTGGCCTGAGGGATaGATGGTTTTGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGVWPEG*MVLNWN
Trigger: GTTCCAGTTCAAAACCATCCATCCCTCAGGCCAAAC...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTCAGCATCAATCACTGTaGAAACTCCCCTTCGATCAG +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGQHQSL*KLPFDQ
Trigger: CTGATCGAAGGGGAGTTTCCACAGTGATTGATGCTG...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCGTATGCTGCCGCTGGTaGAGCCTGAGCTGTTACTCA +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLAVCCRW*SLSCYS
Trigger: TGAGTAACAGCTCAGGCTCCACCAGCGGCAGCATAC...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTGGGGCTGGCTCTCATTaGTGGGCAGCGGAGATCGGT +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVGAGSH*WAAEIG
Trigger: ACCGATCTCCGCTGCCCACCAATGAGAGCCAGCCCC...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAGGCTGAGGGGCTaGCTCTCATTGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDKRLRG*LSLVGS
Trigger: GCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTT...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCTCCATCCAGGTAGGATaGGCGGCTGCTGTCACTAAG +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLASIQVG*AAAVTK
Trigger: CTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGA...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTATCAGGCCCCCAGATCTaGTCACTGTTCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLSGPQI*SLFQAP
Trigger: GGGAGCCTGGAACAGTGACCAGATCTGGGGGCCTGA...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCATCAGGCCCCCAGATCTaGTCACTGTTCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASSGPQI*SLFQAP
Trigger: GGGAGCCTGGAACAGTGACCAGATCTGGGGGCCTGA...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGTGTAGGACTGCTCTGTaGCAGCCTGGGGGCGAACCA +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKCRTAL*QPGGEP
Trigger: TGGTTCGCCCCCAGGCTGTCACAGAGCAGTCCTACA...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGTGTGCCTGTCAGCTaGGTCACCACTTTCCCTACC +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYSVPVS*VTTFPT
Trigger: GGTAGGGAAAGTGGTGACTCAGCTGACAGGCACACT...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTAGAATTTGGAAGACATaGAAGTCATGGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGRIWKT*KSWPRV
Trigger: CACCCTTGGCCATGACTTTCATGTCTTCCAAATTCT...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGGGCCACCATAAGGGTTaGTGGGGAAAACGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRGHHKG*WGKRGK
Trigger: CTTCCCACGTTTTCCCCATCAACCCTTATGGTGGCC...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGATGACCCTGGCATGCTaGCGGGGTCAGAGCGGACTG +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPMTLAC*RGQSGL
Trigger: CAGTCCGCTCTGACCCCGTCAGCATGCCAGGGTCAT...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCAATGACCCTGGCATGCTaGCGGGGTCAGAGCGGACTG +
Preference number: 4 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPMTLAC*RGQSGL
Trigger: CAGTCCGCTCTGACCCCGTCAGCATGCCAGGGTCAT...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCACAGCCAGACATGAGCTaGGGCTGTGACTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASQPDMS*GCDCPL
Trigger: GAGTGGACAGTCACAGCCTCAGCTCATGTCTGGCTG...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGCCAGACATGAGCTaGGGCTGTGACTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLQPDMS*GCDCPL
Trigger: GAGTGGACAGTCACAGCCTCAGCTCATGTCTGGCTG...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTGACAAACTCTTCCCATaGACAGATGGGGAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGDKLFP*TDGERK
Trigger: CTTTCTTTCCCCATCTGTTCATGGGAAGAGTTTGTC...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGAATCAACTTGTTTTCTaGATAAGCAAGCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRNQLVF*ISKPAA
Trigger: AGCCGCTGGCTTGCTTATGCAGAAAACAAGTTGATT...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACTACAGCGACCTCCTTaGTTAGACGTCAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPLQRPP*LDVSSC
Trigger: ACAAGAACTGACGTCTAAGCAAGGAGGTCGCTGTAG...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCGTGACCCAGAAGGGCTaGTTGATAGACCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLAVTQKG*LIDLEQ
Trigger: CTGTTCCAGGTCTATCAAGCAGCCCTTCTGGGTCAC...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTGGCTGCTTGATTTGTaGAAGAGGCATCACTACCAT +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPWLLDL*KRHHYH
Trigger: ATGGTAGTGATGCCTCTTGCACAAATCAAGCAGCCA...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCCCCAATGTCATTGGCTaGTTGATTTGTGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPPNVIG*LICARG
Trigger: GCCTCTTGCACAAATCAAGCAGCCAATGACATTGGG...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCACCCAATGTCATTGGCTaGTTGATTTGTGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPPNVIG*LICARG
Trigger: GCCTCTTGCACAAATCAAGCAGCCAATGACATTGGG...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATGTCACTAATCTTGGGTaGAGTGCTGAGGGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDVTNLG*SAEGSR
Trigger: CCGCGACCCCTCAGCACTGCACCCAAGATTAGTGAC...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTAGTCACTAATCTTGGGTaGAGTGCTGAGGGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLVTNLG*SAEGSR
Trigger: CCGCGACCCCTCAGCACTGCACCCAAGATTAGTGAC...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTTCCATGGAGGACATGTaGCGCAGCCCGAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSSMEDM*RSPKPS
Trigger: TGAGGGCTTCGGGCTGCGGCACATGTCCTCCATGGA...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTTCCATGGAGGACATGTaGCGCAGCCCGAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSSMEDM*RSPKPS
Trigger: TGAGGGCTTCGGGCTGCGGCACATGTCCTCCATGGA...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTAGGCCCTCCTCCGTGTaGTCCATGGAGGACATGTGC +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSRPSSV*SMEDMC
Trigger: GCACATGTCCTCCATGGAGCACACGGAGGAGGGCCT...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGAGTTTCTTGGTATGCTaGCGCTGGTGGAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRSFLVC*RWWSLS
Trigger: GCTCAGGCTCCACCAGCGGCAGCATACCAAGAAACT...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCCAAAGTTTCTTGGTATaGTGCCGCTGGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLAQSFLV*CRWWSL
Trigger: CAGGCTCCACCAGCGGCAGCATACCAAGAAACTTTG...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACCAGTCAGAAGCAGGTTaGTGGTACCTACGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYQSEAG*WYLREA
Trigger: GGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTG...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGGCAAGTGCGCTGAGGTaGTTGGAGAAGGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRASALR*LEKGLF
Trigger: GAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGC...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACGCAAGTGCGCTGAGGTaGTTGGAGAAGGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYASALR*LEKGLF
Trigger: GAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGC...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCATGCAGGATGTCATATaGAAACATACACAGGGACCG +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPMQDVI*KHTQGP
Trigger: CGGTCCCTGTGTATGTTTGCATATGACATCCTGCAT...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTATGCTCTGTGACAGCCTaGGGGCGAACCACAACTCCA +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLCSVTA*GRTTTP
Trigger: TGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCA...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCTTCTCCATCCAGGTAGGAATAGGATTCATGTTTaGCCCTGGACATGGATAGCA +
Preference number: 4 (lower is better)
Translates to: EGKCAEVLGEGSLLHPGRNRIHV*PWTWIA
Trigger: TGCTATCCATGTCCAGGGCCAAACATGAATCCTATT...CCTACCTGGATGGAGAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAACTGTGATGATGCCTaGGACCAAAGGACTCCGCCG +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYNCDDA*DQRTPP
Trigger: CGGCGGAGTCCTTTGGTCCCAGGCATCATCACAGTT...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACTCACTCACAAGCACCTaGCCCTCTCCAACGGTTTCG +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYSLTST*PSPTVS
Trigger: CGAAACCGTTGGAGAGGGCCAGGTGCTTGTGAGTGA...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATCACACTGGCTTCTCATaGGCAGGGAAGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDHTGFS*AGKWAT
Trigger: TGTGGCCCACTTCCCTGCCCATGAGAAGCCAGTGTG...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGAGCCATGCAGCACACTaGCTTCTCATGGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRSHAAH*LLMGRE
Trigger: TTCCCTGCCCATGAGAAGCCAGTGTGCTGCATGGCT...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGCCATGCAGCACACTaGCTTCTCATGGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYSHAAH*LLMGRE
Trigger: TTCCCTGCCCATGAGAAGCCAGTGTGCTGCATGGCT...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAGTCCAGCACTTTTCTaGAAACGGCTCATGCGATTC +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPSPALF*KRLMRF
Trigger: GAATCGCATGAGCCGTTTCCAGAAAAGTGCTGGACT...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCTCATTGGTGGGCAGCGGAGATCGGTAGCCATCAAAGTTTCTTGGTATGCTGCTCACTACCATCAAGCTaGGAAGAGGAGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SHWWAAEIGSHQSFLVCCSLPSS*EEERAE
Trigger: CTCGGCTCTCTCCTCTTCCCAGCTTGATGGTAGTGA...GCAGCATACCAAGAAACTTTGATGGCTACCGATCTCCGCTGCCCACCAATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAGGTCCCCAATGTCATTaGCTGCTTGATTTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPGPQCH*LLDLCK
Trigger: CTTGCACAAATCAAGCAGCCAATGACATTGGGGACC...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCGTTACAATTTCAACCTaGGAAAGCCATTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLVTIST*ESHSSS
Trigger: AGATGAAGAATGGCTTTCCCAGGTTGAAATTGTAAC...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGGGACCGAGCTTCTACAGTCTCTCCTGGCCACAGCCTCCACCGACAGGTGTGGTTACAATTTCAACCTaGGAAAGCCATTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: QGPSFYSLSWPQPPPTGVVTIST*ESHSSS
Trigger: AGATGAAGAATGGCTTTCCCAGGTTGAAATTGTAAC...CACACCTGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAAGCTCGGTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCTCCTCCAGCGTTACAATTTCAACCTaGGAAAGCCATTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: EEQRLKGRTRAGLLPSSSVTIST*ESHSSS
Trigger: AGATGAAGAATGGCTTTCCCAGGTTGAAATTGTAAC...GCTGGAGGAGGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCTTTGAACTGGAACTGTaGACCCATCCACAGACGTCT +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPFELEL*THPQTS
Trigger: AGACGTCTGTGGATGGGTCCACAGTTCCAGTTCAAA...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCGTTTGGCCTGAGGGATaGATGGTTTTGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPVWPEG*MVLNWN
Trigger: GTTCCAGTTCAAAACCATCCATCCCTCAGGCCAAAC...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGTTGGTATGCTGCCGCTaGTGGAGCCTGAGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRLVCCR*WSLSCY
Trigger: GTAACAGCTCAGGCTCCACCAGCGGCAGCATACCAA...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTGCTGGCTCTCATTGGTaGGCAGCGGAGATCGGTAGC +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVAGSHW*AAEIGS
Trigger: GCTACCGATCTCCGCTGCCCACCAATGAGAGCCAGC...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCAGGGGCTGGCTCTCATTaGTGGGCAGCGGAGATCGGT +
Preference number: 4 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPGAGSH*WAAEIG
Trigger: ACCGATCTCCGCTGCCCACCAATGAGAGCCAGCCCC...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTAAGAGGCTGAGGGGCTaGCTCTCATTGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSKRLRG*LSLVGS
Trigger: GCTGCCCACCAATGAGAGCCAGCCCCTCAGCCTCTT...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGCTCCACCGACAGGTGTaGCAGAGGGCAAGTGCGCTG +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPLHRQV*QRASAL
Trigger: CAGCGCACTTGCCCTCTGCCACACCTGTCGGTGGAG...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGTTCTACAGTCTCTCCTaGCCACAGCCTCCACCGACA +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRFYSLS*PQPPPT
Trigger: TGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAA...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTCTGACCAAGGGAAGCTaGGGGCAGTGTGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGLTKGS*GQCVSQ
Trigger: CTGTGACACACACTGCCCCCAGCTTCCCTTGGTCAG...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CCATCTCCCCAGTACGAAGTGAATACAGATCCACACAACAGTACGGTGGGCTTGATGTATGTGACAGCCTaGGGGCGAACCACAACTCCA +
Preference number: 4 (lower is better)
Translates to: PSPQYEVNTDPHNSTVGLMYVTA*GRTTTP
Trigger: TGGAGTTGTGGTTCGCCCCCAGGCTGTCACATACAT...CAAGCCCACCGTACTGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586241.1
CDS-3UTR TCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCAGCGACAGTCATGGCTaGAGCAGATGTCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLASDSHG*SRCPVL
Trigger: AAGTACAGGACATCTGCTTCAGCCATGACTGTCGCT...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTAGGCCACCATAAGGGTTaGTGGGGAAAACGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLGHHKG*WGKRGK
Trigger: CTTCCCACGTTTTCCCCATCAACCCTTATGGTGGCC...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGGCCACCATAAGGGTTaGTGGGGAAAACGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTGHHKG*WGKRGK
Trigger: CTTCCCACGTTTTCCCCATCAACCCTTATGGTGGCC...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTAATGCTTCCCTCTCGCTaGAGTTCTGTTCCGGATCCC +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLMLPSR*SSVPDP
Trigger: GGGATCCGGAACAGAACTTCAGCGAGAGGGAAGCAT...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000588874.5
CDS-3UTR TCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGAGGGCAAGTGCGCTaGGGTGCTTGGAGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPRGQVR*GAWRRV
Trigger: GACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCT...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATCATGAGCTGAGGCTGTaGCTGTCCACTCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDHELRL*LSTQGQ
Trigger: TTGACCCTGAGTGGACAGTCACAGCCTCAGCTCATG...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGCAGCCAGACATGAGCTaGGGCTGTGACTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKQPDMS*GCDCPL
Trigger: GAGTGGACAGTCACAGCCTCAGCTCATGTCTGGCTG...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTGCCAGCACAGCAGTCTaGGATCAAACTGCAAGGCGG +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVASTAV*DQTARR
Trigger: CCGCCTTGCAGTTTGATCTCAGACTGCTGTGCTGGC...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588874.5
CDS-3UTR GCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAAGAGAAGAGCTCTTGTaGTTCACCACTGATAGGGAT +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPREELL*FTTDRD
Trigger: ATCCCTATCAGTGGTGAAGCACAAGAGCTCTTCTCT...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTTGCCAGAAGATCCAATaGTCTTACAAACACCAAGGA +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGCQKIQ*SYKHQG
Trigger: TCCTTGGTGTTTGTAAGAGCATTGGATCTTCTGGCA...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCTCATTGGTGGGCAGCGGAGATCGGTAGCCATCAAAGTTTCTTGGTATGCTGCCTCCGCCCATCGATTTaGTGGGTGAAATTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SHWWAAEIGSHQSFLVCCLRPSI*WVKFVE
Trigger: CTCCACAAATTTCACCCAGCAAATCGATGGGCGGAG...GCAGCATACCAAGAAACTTTGATGGCTACCGATCTCCGCTGCCCACCAATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR GCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCAAGGCCCTCCTCCGTGTaGTCCATGGAGGACATGTGC +
Preference number: 4 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPRPSSV*SMEDMC
Trigger: GCACATGTCCTCCATGGAGCACACGGAGGAGGGCCT...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATCAGTCAGAAGCAGGTTaGTGGTACCTACGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDQSEAG*WYLREA
Trigger: GGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTG...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTGCAAGTGCGCTGAGGTaGTTGGAGAAGGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGASALR*LEKGLF
Trigger: GAAGAGACCCTTCTCCAAGCACCTCAGCGCACTTGC...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACCCAAAACACTTCACTaGCACGTGTCTCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLPKTLH*HVSLRG
Trigger: CCCCCTGAGAGACACGTGGCAGTGAAGTGTTTTGGG...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR CCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTTGCTCTGTGACAGCCTaGGGGCGAACCACAACTCCA +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSCSVTA*GRTTTP
Trigger: TGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCA...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTGTGCTTCACCACTGATAGGGATGCTCCAGACCTGCATTCCATCACTGTAGCCTCTAGCCGCTCGAATTaGGCCATGTCGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: LCFTTDRDAPDLHSITVASSRSN*AMSNRE
Trigger: TTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGA...GGCTACAGTGATGGAATGCAGGTCTGGAGCATCCCTATCAGTGGTGAAGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586241.1
ENST00000591147.5
ENST00000592848.5
CDS-3UTR CCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCTCTAGCCGCTCGAATTaGGCCATGTCGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLASSRSN*AMSNRE
Trigger: TTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGA...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAAGATTCTAGCCGCTCGAATTGGGCCATGTCGAACAGAGAAGAGCTCTTGTGCTCTAGCCGCTCGAATTaGGCCATGTCGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: QDSSRSNWAMSNREELLCSSRSN*AMSNRE
Trigger: TTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGA...GCACAAGAGCTCTTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGAATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586241.1
ENST00000591147.5
ENST00000592848.5
CDS-3UTR CCA 90 bp GGCAAGATTCTAGCCGCTCGAATTGGGCCATGTCGAACAGAGAAGAGCTCTTGTTCTAGCCGCTCGAATTaGGCCATGTCGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: GKILAARIGPCRTEKSSCSSRSN*AMSNRE
Trigger: TTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGA...ACAAGAGCTCTTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGAATCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586241.1
ENST00000591147.5
ENST00000592848.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACCACACAACAGTACGGTaGGCTTGTGCCAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYHTTVR*ACARRS
Trigger: GGATCTTCTGGCACAAGCCCACCGTACTGTTGTGTG...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGAATACAGATCCACACAACAGTACGGTGGGCTTGTGCCAGAAGATCCAATGCCACACAACAGTACGGTaGGCTTGTGCCAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: VNTDPHNSTVGLCQKIQCHTTVR*ACARRS
Trigger: GGATCTTCTGGCACAAGCCCACCGTACTGTTGTGTG...GCATTGGATCTTCTGGCACAAGCCCACCGTACTGTTGTGTGGATCTGTATTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
CDS-3UTR CCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCCGCCGTGAATTACTGTaGATGGCAACATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPRRELL*MATSSS
Trigger: AGAAGATGATGTTGCCATCCACAGTAATTCACGGCG...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAACTGTGATGATGCCTaGGACCAAAGGACTCCGCCG +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDNCDDA*DQRTPP
Trigger: CGGCGGAGTCCTTTGGTCCCAGGCATCATCACAGTT...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATTCACTCACAAGCACCTaGCCCTCTCCAACGGTTTCG +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDSLTST*PSPTVS
Trigger: CGAAACCGTTGGAGAGGGCCAGGTGCTTGTGAGTGA...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTATCACTCACAAGCACCTaGCCCTCTCCAACGGTTTCG +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLSLTST*PSPTVS
Trigger: CGAAACCGTTGGAGAGGGCCAGGTGCTTGTGAGTGA...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTATCATGGGCAGGGAAGTaGGCCACAATGCCATCACTG +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLSWAGK*ATMPSL
Trigger: CAGTGATGGCATTGTGGCCCACTTCCCTGCCCATGA...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATTCATGGGCAGGGAAGTaGGCCACAATGCCATCACTG +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDSWAGK*ATMPSL
Trigger: CAGTGATGGCATTGTGGCCCACTTCCCTGCCCATGA...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTCACACTGGCTTCTCATaGGCAGGGAAGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVHTGFS*AGKWAT
Trigger: TGTGGCCCACTTCCCTGCCCATGAGAAGCCAGTGTG...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAAGCCATGCAGCACACTaGCTTCTCATGGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTSHAAH*LLMGRE
Trigger: TTCCCTGCCCATGAGAAGCCAGTGTGCTGCATGGCT...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAGATGTCCTGTACTTTaGCTTCAGTTTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPRCPVL*LQFLPC
Trigger: ACAGGGGAGAAACTGAAGCCAAAGTACAGGACATCT...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CACCGACAGGTGTGGCAGAGGGCAAGTGCGCTGAGGTGCTTGGAGAAGGGTCTCAGGTTTAACTTTGCATaGGGCTTTTATGGAAAAACA +
Preference number: 4 (lower is better)
Translates to: HRQVWQRASALRCLEKGLRFNFA*GFYGKT
Trigger: TGTTTTTCCATAAAAGCCCCATGCAAAGTTAAACCT...GAGACCCTTCTCCAAGCACCTCAGCGCACTTGCCCTCTGCCACACCTGTCGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000390652.9
ENST00000588462.5
CDS-3UTR CCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGCGAGGAGCAGAGGGTaGTTTGCATTAAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTARSRG*FALNGG
Trigger: GCCACCGTTTAATGCAAACCACCCTCTGCTCCTCGC...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACATCCAAAAGAGGCTGTaGCGTGTCACTCGGACCATG +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYIQKRL*RVTRTM
Trigger: CATGGTCCGAGTGACACGCCACAGCCTCTTTTGGAT...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGATCCAAAAGAGGCTGTaGCGTGTCACTCGGACCATG +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRIQKRL*RVTRTM
Trigger: CATGGTCCGAGTGACACGCCACAGCCTCTTTTGGAT...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACTCAGAGCGGACTGGCTaGATCCTGAGACTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYSERTG*ILRLLR
Trigger: TCTCAACAGTCTCAGGATCCAGCCAGTCCGCTCTGA...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACTCAGAAGCAGGTTGCTaGTACCTACGGGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYSEAGC*YLREAS
Trigger: ACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGA...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTCCATCCAGGTAGGATaGGCGGCTGCTGTCACTAAG +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGSIQVG*AAAVTK
Trigger: CTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGA...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCTACAGTCTCTCCTaGCCACAGCCTCCACCGACA +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGFYSLS*PQPPPT
Trigger: TGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAA...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCATCAGGCCCCCAGATCTaGTCACTGTTCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPSGPQI*SLFQAP
Trigger: GGGAGCCTGGAACAGTGACCAGATCTGGGGGCCTGA...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACGTCAAAATGGCCAGGTaGACGATCAACTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYVKMAR*TINSVP
Trigger: GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGAC...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCCACTCAGGGTCAAAATaGCCAGGTGGACGATCAACT +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLAHSGSK*PGGRST
Trigger: AGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCTGACCAAGGGAAGCTaGGGGCAGTGTGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSLTKGS*GQCVSQ
Trigger: CTGTGACACACACTGCCCCCAGCTTCCCTTGGTCAG...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTGACCAAGGGAAGCTaGGGGCAGTGTGTGTCACAG +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSLTKGS*GQCVSQ
Trigger: CTGTGACACACACTGCCCCCAGCTTCCCTTGGTCAG...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTTGCAGCGTGATTTATTaGACAAGACGTGCACTTTTC +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGCSVIY*TRRALF
Trigger: GAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCA...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GATTCTAGCCGCTCGAATTGGGCCATGTCGAACAGAGAAGAGCTCTTGTGCTTCCTTCCTGGAAGCCTGTaGCACAACATCCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: DSSRSNWAMSNREELLCFLPGSL*HNILQK
Trigger: TTTCTGCAGGATGTTGTGCCACAGGCTTCCAGGAAG...GAAGCACAAGAGCTCTTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591147.5
CDS-3UTR TCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCCTCCCCAGTACGAAGTaGATACAGATCCACACAACA +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLALPSTK*IQIHTT
Trigger: TGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAG...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAATCTTCTGTCACACCTaGAGGCAGTGTGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASIFCHT*RQCACQ
Trigger: CTGACAGGCACACTGCCTTCAGGTGTGACAGAAGAT...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCCAAGGGTGTCTGTTGTaGCTAGAAGCATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLAQGCLL*LEAFHL
Trigger: CAAGTGGAATGCTTCTAGTCACAACAGACACCCTTG...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGAGCGACAGTCATGGCTaGAGCAGATGTCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRSDSHG*SRCPVL
Trigger: AAGTACAGGACATCTGCTTCAGCCATGACTGTCGCT...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCATTCACTACTCGTGGTaGCATATGTGTACGAACACA +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPIHYSW*HMCTNT
Trigger: TGTGTTCGTACACATATGTCACCACGAGTAGTGAAT...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTATTATTTGCAAACCATaGCCTGGATGTTCCGAAGAT +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGIICKP*PGCSED
Trigger: ATCTTCGGAACATCCAGGTCATGGTTTGCAAATAAT...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp AAAATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACAGAGACTGGACGGGATaGCCCTGGCATGCTGACGGG +
Preference number: 4 (lower is better)
Translates to: KIQKRIQCRMSYANIHRDRDWTG*PWHADG
Trigger: CCCGTCAGCATGCCAGGGTCATCCCGTCCAGTCTCT...GTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCATGAGCTGAGGCTGTaGCTGTCCACTCAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSHELRL*LSTQGQ
Trigger: TTGACCCTGAGTGGACAGTCACAGCCTCAGCTCATG...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGCAGCCAGACATGAGCTaGGGCTGTGACTGTCCACTC +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPQPDMS*GCDCPL
Trigger: GAGTGGACAGTCACAGCCTCAGCTCATGTCTGGCTG...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACATGCCGGTTCGTTTGGTaGTGGTCCCCAATGTCATTG +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTCRFVW*WSPMSL
Trigger: CAATGACATTGGGGACCATCACCAAACGAACCGGCA...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407086.8
ENST00000408905.7
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAAATCAACTTGTTTTCTaGATAAGCAAGCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPNQLVF*ISKPAA
Trigger: AGCCGCTGGCTTGCTTATGCAGAAAACAAGTTGATT...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTAGTGACCCAGAAGGGCTaGTTGATAGACCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLVTQKG*LIDLEQ
Trigger: CTGTTCCAGGTCTATCAAGCAGCCCTTCTGGGTCAC...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATCTGTTCAGTTTCCCATaGAAGGGTGACCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDLFSFP*KGDPEG
Trigger: CCCTTCTGGGTCACCCTTGCATGGGAAACTGAACAG...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACGAGCAGAGGGTGGTTTaGATTAAACGGTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYEQRVV*IKRWLQ
Trigger: TTGCAGCCACCGTTTAATGCAAACCACCCTCTGCTC...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGGAGCAGAGGGTGGTTTaGATTAAACGGTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYREQRVV*IKRWLQ
Trigger: TTGCAGCCACCGTTTAATGCAAACCACCCTCTGCTC...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCACAAAGTTTCTTGGTATaGTGCCGCTGGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASQSFLV*CRWWSL
Trigger: CAGGCTCCACCAGCGGCAGCATACCAAGAAACTTTG...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAAAGTTTCTTGGTATaGTGCCGCTGGTGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLQSFLV*CRWWSL
Trigger: CAGGCTCCACCAGCGGCAGCATACCAAGAAACTTTG...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCAGTCAGAAGCAGGTTaGTGGTACCTACGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSQSEAG*WYLREA
Trigger: GGCTTCCCGTAGGTACCAGCAACCTGCTTCTGACTG...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AAGATTCTAGCCGCTCGAATTGGGCCATGTCGAACAGAGAAGAGCTCTTGTGCTCACCAGTACAACGACTaGGTCTTCTTGGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: KILAARIGPCRTEKSSCAHQYND*VFLGNL
Trigger: CAGATTCCCCAAGAAGACCCAGTCGTTGTACTGGTG...AGCACAAGAGCTCTTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586241.1
ENST00000591147.5
ENST00000592848.5
CDS-3UTR CCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGCACCAGTACAACGACTaGGTCTTCTTGGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRHQYND*VFLGNL
Trigger: CAGATTCCCCAAGAAGACCCAGTCGTTGTACTGGTG...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCATGCTCTGTGACAGCCTaGGGGCGAACCACAACTCCA +
Preference number: 4 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPCSVTA*GRTTTP
Trigger: TGGAGTTGTGGTTCGCCCCCAGGCTGTCACAGAGCA...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTCACACAACAGTACGGTaGGCTTGTGCCAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGHTTVR*ACARRS
Trigger: GGATCTTCTGGCACAAGCCCACCGTACTGTTGTGTG...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTGATGAAGGAAGAGCAGAGACTGAAGGGTAGGACCAGAGCGGGGCTTCTCCCCGTGAATTACTGTGGATaGCAACATCATCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LMKEEQRLKGRTRAGLLPVNYCG*QHHLLS
Trigger: TGACAGAAGATGATGTTGCCATCCACAGTAATTCAC...GGGGAGAAGCCCCGCTCTGGTCCTACCCTTCAGTCTCTGCTCTTCCTTCATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TTCTCCATCCAGGTAGGATGGGCGGCTGCTGTCACTAAGCTTGGGGAAGGTGGTGTGAATTACTGTGGATaGCAACATCATCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: FSIQVGWAAAVTKLGEGGVNYCG*QHHLLS
Trigger: TGACAGAAGATGATGTTGCCATCCACAGTAATTCAC...ACCACCTTCCCCAAGCTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTAACTGTGATGATGCCTaGGACCAAAGGACTCCGCCG +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSNCDDA*DQRTPP
Trigger: CGGCGGAGTCCTTTGGTCCCAGGCATCATCACAGTT...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCACTCACAAGCACCTaGCCCTCTCCAACGGTTTCG +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVSLTST*PSPTVS
Trigger: CGAAACCGTTGGAGAGGGCCAGGTGCTTGTGAGTGA...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTTCATGGGCAGGGAAGTaGGCCACAATGCCATCACTG +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSSWAGK*ATMPSL
Trigger: CAGTGATGGCATTGTGGCCCACTTCCCTGCCCATGA...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGCACACTGGCTTCTCATaGGCAGGGAAGTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPHTGFS*AGKWAT
Trigger: TGTGGCCCACTTCCCTGCCCATGAGAAGCCAGTGTG...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAGCCATGCAGCACACTaGCTTCTCATGGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKSHAAH*LLMGRE
Trigger: TTCCCTGCCCATGAGAAGCCAGTGTGCTGCATGGCT...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAACCCAGCGACAGTCATaGCTGAAGCAGATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTTQRQS*LKQMSC
Trigger: ACAGGACATCTGCTTCAGCCATGACTGTCGCTGGGT...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATACCCAGCGACAGTCATaGCTGAAGCAGATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDTQRQS*LKQMSC
Trigger: ACAGGACATCTGCTTCAGCCATGACTGTCGCTGGGT...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTATCACTACCATCAAGCTaGGAAGAGGAGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLSLPSS*EEERAE
Trigger: CTCGGCTCTCTCCTCTTCCCAGCTTGATGGTAGTGA...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACCGCCCATCGATTTGCTaGGTGAAATTTGTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYRPSIC*VKFVEE
Trigger: CTCCTCCACAAATTTCACCCAGCAAATCGATGGGCG...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTGCGAGGAGCAGAGGGTaGTTTGCATTAAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVARSRG*FALNGG
Trigger: GCCACCGTTTAATGCAAACCACCCTCTGCTCCTCGC...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCTGGATGGTTTTGAACTaGAACTGTGGACCCATCCAC +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLAWMVLN*NCGPIH
Trigger: GTGGATGGGTCCACAGTTCCAGTTCAAAACCATCCA...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATTCAGAGCGGACTGGCTaGATCCTGAGACTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDSERTG*ILRLLR
Trigger: TCTCAACAGTCTCAGGATCCAGCCAGTCCGCTCTGA...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTGTATGCTGCCGCTGGTaGAGCCTGAGCTGTTACTCA +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSVCCRW*SLSCYS
Trigger: TGAGTAACAGCTCAGGCTCCACCAGCGGCAGCATAC...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTGTATGCTGCCGCTGGTaGAGCCTGAGCTGTTACTCA +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVVCCRW*SLSCYS
Trigger: TGAGTAACAGCTCAGGCTCCACCAGCGGCAGCATAC...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTTTGGTATGCTGCCGCTaGTGGAGCCTGAGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSLVCCR*WSLSCY
Trigger: GTAACAGCTCAGGCTCCACCAGCGGCAGCATACCAA...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGTTGGTATGCTGCCGCTaGTGGAGCCTGAGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKLVCCR*WSLSCY
Trigger: GTAACAGCTCAGGCTCCACCAGCGGCAGCATACCAA...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGGCCATCAAAGTTTCTTaGTATGCTGCCGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRAIKVS*YAAAGG
Trigger: TCCACCAGCGGCAGCATACCAAGAAACTTTGATGGC...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACGCCATCAAAGTTTCTTaGTATGCTGCCGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYAIKVS*YAAAGG
Trigger: TCCACCAGCGGCAGCATACCAAGAAACTTTGATGGC...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACATCAGAAGCAGGTTGCTaGTACCTACGGGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTSEAGC*YLREAS
Trigger: ACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGA...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGTCCATCCAGGTAGGATaGGCGGCTGCTGTCACTAAG +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKSIQVG*AAAVTK
Trigger: CTTAGTGACAGCAGCCGCCCATCCTACCTGGATGGA...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGTTCTACAGTCTCTCCTaGCCACAGCCTCCACCGACA +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKFYSLS*PQPPPT
Trigger: TGTCGGTGGAGGCTGTGGCCAGGAGAGACTGTAGAA...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTGTCAAAATGGCCAGGTaGACGATCAACTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGVKMAR*TINSVP
Trigger: GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGAC...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCAAAATGGCCAGGTaGACGATCAACTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTVKMAR*TINSVP
Trigger: GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGAC...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTCAAAATGGCCAGGTaGACGATCAACTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASVKMAR*TINSVP
Trigger: GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGAC...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGCACTCAGGGTCAAAATaGCCAGGTGGACGATCAACT +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRHSGSK*PGGRST
Trigger: AGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCATGCAGCGTGATTTATTaGACAAGACGTGCACTTTTC +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPCSVIY*TRRALF
Trigger: GAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCA...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GTGAATACAGATCCACACAACAGTACGGTGGGCTTGTGCCAGAAGATCCAATGCCTCCCCAGTACGAAGTaGATACAGATCCACACAACA +
Preference number: 4 (lower is better)
Translates to: VNTDPHNSTVGLCQKIQCLPSTK*IQIHTT
Trigger: TGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAG...GCATTGGATCTTCTGGCACAAGCCCACCGTACTGTTGTGTGGATCTGTATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
CDS-3UTR TCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGTGTGCCTGTCAGCTaGGTCACCACTTTCCCTACC +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPSVPVS*VTTFPT
Trigger: GGTAGGGAAAGTGGTGACTCAGCTGACAGGCACACT...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCAAGTGTGCCTGTCAGCTaGGTCACCACTTTCCCTACC +
Preference number: 4 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPSVPVS*VTTFPT
Trigger: GGTAGGGAAAGTGGTGACTCAGCTGACAGGCACACT...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCAAAGGACTCCGCCGTaGATTACTGTGGATGGCAAC +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSQRTPP*ITVDGN
Trigger: GTTGCCATCCACAGTAATTCACGGCGGAGTCCTTTG...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACCAAGGGTGTCTGTTGTaGCTAGAAGCATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYQGCLL*LEAFHL
Trigger: CAAGTGGAATGCTTCTAGTCACAACAGACACCCTTG...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCAGAATTTGGAAGACATaGAAGTCATGGCCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLARIWKT*KSWPRV
Trigger: CACCCTTGGCCATGACTTTCATGTCTTCCAAATTCT...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCGATGAGGACCAAGGATaGGTCAGAATTTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLADEDQG*VRIWKT
Trigger: TGTCTTCCAAATTCTGACTCATCCTTGGTCCTCATC...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACTCAGTTTCTCCCCTGTaGAGAGTATACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYSVSPL*RVYRWW
Trigger: CCACCATCTGTATACTCTTCACAGGGGAGAAACTGA...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAATTATTTGCAAACCATaGCCTGGATGTTCCGAAGAT +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPIICKP*PGCSED
Trigger: ATCTTCGGAACATCCAGGTCATGGTTTGCAAATAAT...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTAGGGATGGATGGTTTTaGACTGGAACTGTGGACCCA +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGRDGWF*TGTVDP
Trigger: TGGGTCCACAGTTCCAGTTCAAAACCATCCATCCCT...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCTCATTGGTGGGCAGCGGAGATCGGTAGCCATCAAAGTTTCTTGGTATGCTGCGACAAACTCTTCCCATaGACAGATGGGGAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: SHWWAAEIGSHQSFLVCCDKLFP*TDGERK
Trigger: CTTTCTTTCCCCATCTGTTCATGGGAAGAGTTTGTC...GCAGCATACCAAGAAACTTTGATGGCTACCGATCTCCGCTGCCCACCAATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR TCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTCACGGTTTCCTTCACTaGTCAGTACAGGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVHGFLH*SVQDQG
Trigger: ACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTG...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCAGAGAAGAGCTCTTGTaGTTCACCACTGATAGGGAT +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLAREELL*FTTDRD
Trigger: ATCCCTATCAGTGGTGAAGCACAAGAGCTCTTCTCT...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACATCTGGAAACGGCTCATaGGATTCACTACTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTSGNGS*DSLLVV
Trigger: CACCACGAGTAGTGAATCGCATGAGCCGTTTCCAGA...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGGTGACCCAGAAGGGCTaGTTGATAGACCTGGAACAG +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKVTQKG*LIDLEQ
Trigger: CTGTTCCAGGTCTATCAAGCAGCCCTTCTGGGTCAC...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTGTTCAGTTTCCCATaGAAGGGTGACCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSLFSFP*KGDPEG
Trigger: CCCTTCTGGGTCACCCTTGCATGGGAAACTGAACAG...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTCTGTTCAGTTTCCCATaGAAGGGTGACCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVLFSFP*KGDPEG
Trigger: CCCTTCTGGGTCACCCTTGCATGGGAAACTGAACAG...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGCTGTTCAGTTTCCCATaGAAGGGTGACCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKLFSFP*KGDPEG
Trigger: CCCTTCTGGGTCACCCTTGCATGGGAAACTGAACAG...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCTCATTGGTGGGCAGCGGAGATCGGTAGCCATCAAAGTTTCTTGGTATGCTGCTGGCTGCTTGATTTGTaGAAGAGGCATCACTACCAT +
Preference number: 4 (lower is better)
Translates to: SHWWAAEIGSHQSFLVCCWLLDL*KRHHYH
Trigger: ATGGTAGTGATGCCTCTTGCACAAATCAAGCAGCCA...GCAGCATACCAAGAAACTTTGATGGCTACCGATCTCCGCTGCCCACCAATGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR GCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTCTCCGCCCATCGATTTaGTGGGTGAAATTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGLRPSI*WVKFVE
Trigger: CTCCACAAATTTCACCCAGCAAATCGATGGGCGGAG...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACTCCGCCCATCGATTTaGTGGGTGAAATTTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLLRPSI*WVKFVE
Trigger: CTCCACAAATTTCACCCAGCAAATCGATGGGCGGAG...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGATACTGTACTGCATCTaGAGCGAGGAGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKILYCI*SEEQRV
Trigger: CACCCTCTGCTCCTCGCTGCAGATGCAGTACAGTAT...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGCTGATAATACTGTACTaGATCTGCAGCGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRLIILY*ICSEEQ
Trigger: CTGCTCCTCGCTGCAGATGCAGTACAGTATTATCAG...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGTTTCTTGGTATGCTaGCGCTGGTGGAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPSFLVC*RWWSLS
Trigger: GCTCAGGCTCCACCAGCGGCAGCATACCAAGAAACT...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATGGGGAAGGTTTTTACTaGTACGTCAAGGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDGEGFY*YVKGCV
Trigger: GACACAGCCCTTGACGTAGCAGTAAAAACCTTCCCC...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTTTGTTACTGTTGGGTTaGTCACGGACGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSLLLLG*SRTLGC
Trigger: ACAGCCCAGCGTCCGTGAGCAACCCAACAGTAACAA...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR GCA 90 bp TGGAAGCCTTTCTCACTAATGTCCTTTCTCTGCTCCAGGATCCAAACCAGGATGACCCAACCTATCAGCTaGTTCCTGGAAGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: WKPFSLMSFLCSRIQTRMTQPIS*FLEAFL
Trigger: GAGAAAGGCTTCCAGGAAGCAGCTGATAGGTTGGGT...CATCCTGGTTTGGATCCTGGAGCAGAGAAAGGACATTAGTGAGAAAGGCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588532.5
CDS-3UTR CCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCACACAACAGTACGGTaGGCTTGTGCCAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSHTTVR*ACARRS
Trigger: GGATCTTCTGGCACAAGCCCACCGTACTGTTGTGTG...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAGTGAATTACTGTGGATaGCAACATCATCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPVNYCG*QHHLLS
Trigger: TGACAGAAGATGATGTTGCCATCCACAGTAATTCAC...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCCGCCGTGAATTACTGTaGATGGCAACATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLARRELL*MATSSS
Trigger: AGAAGATGATGTTGCCATCCACAGTAATTCACGGCG...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCATCACTCACAAGCACCTaGCCCTCTCCAACGGTTTCG +
Preference number: 4 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPSLTST*PSPTVS
Trigger: CGAAACCGTTGGAGAGGGCCAGGTGCTTGTGAGTGA...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTACCCAGCGACAGTCATaGCTGAAGCAGATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVTQRQS*LKQMSC
Trigger: ACAGGACATCTGCTTCAGCCATGACTGTCGCTGGGT...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTTCACTACCATCAAGCTaGGAAGAGGAGAGAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSSLPSS*EEERAE
Trigger: CTCGGCTCTCTCCTCTTCCCAGCTTGATGGTAGTGA...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACGGTCCCCAATGTCATTaGCTGCTTGATTTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYGPQCH*LLDLCK
Trigger: CTTGCACAAATCAAGCAGCCAATGACATTGGGGACC...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TGTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCTGTCATCATTTCCAGTaGTGTGTCGTCACTAATCTT +
Preference number: 4 (lower is better)
Translates to: CDCPLRVKMARWTINSVPCHHFQ*CVVTNL
Trigger: AAGATTAGTGACGACACACCACTGGAAATGATGACA...GGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACATCCACAGACGTCTATaGGGTCCAGTGTGTGTTACA +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYIHRRL*GPVCVT
Trigger: TGTAACACACACTGGACCCCATAGACGTCTGTGGAT...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGTTTGAACTGGAACTGTaGACCCATCCACAGACGTCT +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRFELEL*THPQTS
Trigger: AGACGTCTGTGGATGGGTCCACAGTTCCAGTTCAAA...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGATCCAAAAGAGGCTGTaGCGTGTCACTCGGACCATG +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKIQKRL*RVTRTM
Trigger: CATGGTCCGAGTGACACGCCACAGCCTCTTTTGGAT...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATGCCATCAAAGTTTCTTaGTATGCTGCCGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDAIKVS*YAAAGG
Trigger: TCCACCAGCGGCAGCATACCAAGAAACTTTGATGGC...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTTCAGAAGCAGGTTGCTaGTACCTACGGGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSSEAGC*YLREAS
Trigger: ACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGA...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACACTCCCCAGTACGAAGTaGATACAGATCCACACAACA +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTLPSTK*IQIHTT
Trigger: TGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAG...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCATCAGTTTCTCCCCTGTaGAGAGTATACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASSVSPL*RVYRWW
Trigger: CCACCATCTGTATACTCTTCACAGGGGAGAAACTGA...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTAGCGACAGTCATGGCTaGAGCAGATGTCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSSDSHG*SRCPVL
Trigger: AAGTACAGGACATCTGCTTCAGCCATGACTGTCGCT...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTAAACTGTGGTTTGGCCTaGGGGATGGATGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLNCGLA*GMDGFE
Trigger: TTCAAAACCATCCATCCCTCAGGCCAAACCACAGTT...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAAACTGTGGTTTGGCCTaGGGGATGGATGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASNCGLA*GMDGFE
Trigger: TTCAAAACCATCCATCCCTCAGGCCAAACCACAGTT...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTGTGTCACTCGGACCATaGGACTGCAACACAGATGAA +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSVSLGP*DCNTDE
Trigger: TTCATCTGTGTTGCAGTCTCATGGTCCGAGTGACAC...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGGTGTCACTCGGACCATaGGACTGCAACACAGATGAA +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKVSLGP*DCNTDE
Trigger: TTCATCTGTGTTGCAGTCTCATGGTCCGAGTGACAC...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGGACAAACTCTTCCCATaGACAGATGGGGAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRDKLFP*TDGERK
Trigger: CTTTCTTTCCCCATCTGTTCATGGGAAGAGTTTGTC...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGCACGGTTTCCTTCACTaGTCAGTACAGGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPHGFLH*SVQDQG
Trigger: ACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTG...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAACACCAACTGCAGCGTaGTTTATTGGACAAGACGTG +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTTPTAA*FIGQDV
Trigger: CACGTCTTGTCCAATAAATCACGCTGCAGTTGGTGT...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGGCAGCAATTTTCTCCTaGAAGACTACGACAAGGATC +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRAAIFS*KTTTRI
Trigger: GATCCTTGTCGTAGTCTTGCAGGAGAAAATTGCTGC...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTCCTGGCCAATCAACTTGTTTTCTaGATAAGCAAGCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GCHMQTYTGTELLQSLLANQLVF*ISKPAA
Trigger: AGCCGCTGGCTTGCTTATGCAGAAAACAAGTTGATT...GGCCAGGAGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGATACTGTACTGCATCTaGAGCGAGGAGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPILYCI*SEEQRV
Trigger: CACCCTCTGCTCCTCGCTGCAGATGCAGTACAGTAT...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCACTGATAATACTGTACTaGATCTGCAGCGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASLIILY*ICSEEQ
Trigger: CTGCTCCTCGCTGCAGATGCAGTACAGTATTATCAG...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACATACTCAGAGTCTCGATaGTTCCCTCTCGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTYSESR*FPLAEV
Trigger: AACTTCAGCGAGAGGGAAGCATCGAGACTCTGAGTA...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTTTCAAAACACTTCACTaGCACGTGTCTCTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSFKTLH*HVSLRG
Trigger: CCCCCTGAGAGACACGTGGCAGTGAAGTGTTTTGAA...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408905.7
ENST00000588462.5
CDS-3UTR GCA 90 bp CCTATCAGCTGCTTCCTGGAAGCCTTTCTCACTAATGTCCTTTCTCTGCTCCAGGGATCCAAACCAGGATaGTATCCTGCATTTAGGACA +
Preference number: 4 (lower is better)
Translates to: PISCFLEAFLTNVLSLLQGSKPG*YPAFRT
Trigger: TGTCCTAAATGCAGGATAGCATCCTGGTTTGGATCC...CTGGAGCAGAGAAAGGACATTAGTGAGAAAGGCTTCCAGGAAGCAGCTGATAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588532.5
CDS-3UTR CCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTCACCAGTACAACGACTaGGTCTTCTTGGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVHQYND*VFLGNL
Trigger: CAGATTCCCCAAGAAGACCCAGTCGTTGTACTGGTG...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTATCCACTGTAAGCCTGTaGCACAACATCCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLSTVSL*HNILQK
Trigger: TTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGGA...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTTCTAGCCGCTCGAATTaGGCCATGTCGAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSSSRSN*AMSNRE
Trigger: TTCTCTGTTCGACATGGCCCAATTCGAGCGGCTAGA...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGCACACAACAGTACGGTaGGCTTGTGCCAGAAGATCC +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPHTTVR*ACARRS
Trigger: GGATCTTCTGGCACAAGCCCACCGTACTGTTGTGTG...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGATGTCCTGTACTTTaGCTTCAGTTTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYRCPVL*LQFLPC
Trigger: ACAGGGGAGAAACTGAAGCCAAAGTACAGGACATCT...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGAGATGTCCTGTACTTTaGCTTCAGTTTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRRCPVL*LQFLPC
Trigger: ACAGGGGAGAAACTGAAGCCAAAGTACAGGACATCT...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCAACCCAGCGACAGTCATaGCTGAAGCAGATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPTQRQS*LKQMSC
Trigger: ACAGGACATCTGCTTCAGCCATGACTGTCGCTGGGT...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATGGTCCCCAATGTCATTaGCTGCTTGATTTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDGPQCH*LLDLCK
Trigger: CTTGCACAAATCAAGCAGCCAATGACATTGGGGACC...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACTCTTCCTGTCCACTATaGTCAGAAGCTAAACTGTCG +
Preference number: 4 (lower is better)
Translates to: RALFNRASVTTVSFTDQYSSCPL*SEAKLS
Trigger: CGACAGTTTAGCTTCTGACCATAGTGGACAGGAAGA...GTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGACTGTCCACTCAGGGTCAAAATGGCCAGGTGGACGATCAACTCTGTCCCCAGTTACAATTTCAACCTaGGAAAGCCATTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: VTVHSGSKWPGGRSTLSPVTIST*ESHSSS
Trigger: AGATGAAGAATGGCTTTCCCAGGTTGAAATTGTAAC...TGGGGACAGAGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTGGACAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCATGGATGGTTTTGAACTaGAACTGTGGACCCATCCAC +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASWMVLN*NCGPIH
Trigger: GTGGATGGGTCCACAGTTCCAGTTCAAAACCATCCA...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGCATCAATCACTGTaGAAACTCCCCTTCGATCAG +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLQHQSL*KLPFDQ
Trigger: CTGATCGAAGGGGAGTTTCCACAGTGATTGATGCTG...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTCAGCATCAATCACTGTaGAAACTCCCCTTCGATCAG +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGQHQSL*KLPFDQ
Trigger: CTGATCGAAGGGGAGTTTCCACAGTGATTGATGCTG...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCATCAGAAGCAGGTTGCTaGTACCTACGGGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPSEAGC*YLREAS
Trigger: ACTGGCTTCCCGTAGGTACCAGCAACCTGCTTCTGA...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGCTCCCCAGTACGAAGTaGATACAGATCCACACAACA +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKLPSTK*IQIHTT
Trigger: TGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAG...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTCTCCCCAGTACGAAGTaGATACAGATCCACACAACA +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVLPSTK*IQIHTT
Trigger: TGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAG...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTCAAGGGTGTCTGTTGTaGCTAGAAGCATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVQGCLL*LEAFHL
Trigger: CAAGTGGAATGCTTCTAGTCACAACAGACACCCTTG...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCGACAGTCATGGCTaGAGCAGATGTCCTGTACTT +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPSDSHG*SRCPVL
Trigger: AAGTACAGGACATCTGCTTCAGCCATGACTGTCGCT...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACACATCGATTTGCTGGGTaGAATTTGTGGAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTHRFAG*NLWRRF
Trigger: AAACCTCCTCCACAAATTTCACCCAGCAAATCGATG...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATCATCGATTTGCTGGGTaGAATTTGTGGAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDHRFAG*NLWRRF
Trigger: AAACCTCCTCCACAAATTTCACCCAGCAAATCGATG...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATTGCAATTCATTCCATTaGGGGGTTCTAACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDCNSFH*GVLTRV
Trigger: GACTCTGGTTAGAACCCCTCAATGGAATGAATTGCA...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTAACTGTGGTTTGGCCTaGGGGATGGATGGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVNCGLA*GMDGFE
Trigger: TTCAAAACCATCCATCCCTCAGGCCAAACCACAGTT...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGACAAACTCTTCCCATaGACAGATGGGGAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASDKLFP*TDGERK
Trigger: CTTTCTTTCCCCATCTGTTCATGGGAAGAGTTTGTC...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTACACCAACTGCAGCGTaGTTTATTGGACAAGACGTG +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSTPTAA*FIGQDV
Trigger: CACGTCTTGTCCAATAAATCACGCTGCAGTTGGTGT...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGACACCAACTGCAGCGTaGTTTATTGGACAAGACGTG +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKTPTAA*FIGQDV
Trigger: CACGTCTTGTCCAATAAATCACGCTGCAGTTGGTGT...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTGCAGCAATTTTCTCCTaGAAGACTACGACAAGGATC +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGAAIFS*KTTTRI
Trigger: GATCCTTGTCGTAGTCTTGCAGGAGAAAATTGCTGC...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTACAGCGACCTCCTTaGTTAGACGTCAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSLQRPP*LDVSSC
Trigger: ACAAGAACTGACGTCTAAGCAAGGAGGTCGCTGTAG...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACATGGCTGCTTGATTTGTaGAAGAGGCATCACTACCAT +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTWLLDL*KRHHYH
Trigger: ATGGTAGTGATGCCTCTTGCACAAATCAAGCAGCCA...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTCCCAATGTCATTGGCTaGTTGATTTGTGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVPNVIG*LICARG
Trigger: GCCTCTTGCACAAATCAAGCAGCCAATGACATTGGG...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGCCCAATGTCATTGGCTaGTTGATTTGTGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKPNVIG*LICARG
Trigger: GCCTCTTGCACAAATCAAGCAGCCAATGACATTGGG...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGGAGCAGAGGGTGGTTTaGATTAAACGGTGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPEQRVV*IKRWLQ
Trigger: TTGCAGCCACCGTTTAATGCAAACCACCCTCTGCTC...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTTACTCAGAGTCTCGATaGTTCCCTCTCGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSYSESR*FPLAEV
Trigger: AACTTCAGCGAGAGGGAAGCATCGAGACTCTGAGTA...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTATGCAGGATGTCATATaGAAACATACACAGGGACCG +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGMQDVI*KHTQGP
Trigger: CGGTCCCTGTGTATGTTTGCATATGACATCCTGCAT...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTGGGATGGACACCAACTaGAGCGTGATTTATTGGACA +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSGMDTN*SVIYWT
Trigger: TGTCCAATAAATCACGCTGCAGTTGGTGTCCATCCC...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000390652.9
CDS-3UTR GCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCAGGGGAAGGTTTTTACTaGTACGTCAAGGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPGEGFY*YVKGCV
Trigger: GACACAGCCCTTGACGTAGCAGTAAAAACCTTCCCC...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTTCCATCCCGAACGCATaGTTTGTTACTGTTGGGTTG +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSSIPNA*FVTVGL
Trigger: CAACCCAACAGTAACAAAGCATGCGTTCGGGATGGA...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589222.5
CDS-3UTR GCA 90 bp AAGCCTTTCTCACTAATGTCCTTTCTCTGCTCCAGGATCCAAACCAGGATGCTACTAATGTCCTTTCTCTaGTCCAGGATCCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: KPFSLMSFLCSRIQTRMLLMSFL*SRIQTR
Trigger: CCTGGTTTGGATCCTGGAGCAGAGAAAGGACATTAG...TAGCATCCTGGTTTGGATCCTGGAGCAGAGAAAGGACATTAGTGAGAAAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588532.5
ENST00000592848.5
CDS-3UTR CCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGCACCAGTACAACGACTaGGTCTTCTTGGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPHQYND*VFLGNL
Trigger: CAGATTCCCCAAGAAGACCCAGTCGTTGTACTGGTG...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCACTGTAAGCCTGTaGCACAACATCCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVSTVSL*HNILQK
Trigger: TTTCTGCAGGATGTTGTGCCACAGGCTTACAGTGGA...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACGCCGTGAATTACTGTaGATGGCAACATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLRRELL*MATSSS
Trigger: AGAAGATGATGTTGCCATCCACAGTAATTCACGGCG...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTAAGATGTCCTGTACTTTaGCTTCAGTTTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLRCPVL*LQFLPC
Trigger: ACAGGGGAGAAACTGAAGCCAAAGTACAGGACATCT...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTATCCACAGACGTCTATaGGGTCCAGTGTGTGTTACA +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSIHRRL*GPVCVT
Trigger: TGTAACACACACTGGACCCCATAGACGTCTGTGGAT...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGTTTGAACTGGAACTGTaGACCCATCCACAGACGTCT +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKFELEL*THPQTS
Trigger: AGACGTCTGTGGATGGGTCCACAGTTCCAGTTCAAA...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTTGGATGGTTTTGAACTaGAACTGTGGACCCATCCAC +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVWMVLN*NCGPIH
Trigger: GTGGATGGGTCCACAGTTCCAGTTCAAAACCATCCA...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGGTTTGGCCTGAGGGATaGATGGTTTTGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKVWPEG*MVLNWN
Trigger: GTTCCAGTTCAAAACCATCCATCCCTCAGGCCAAAC...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTGAGATAACTGTGGTTTaGCCTGAGGGATGGATGGTT +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSEITVV*PEGWMV
Trigger: AACCATCCATCCCTCAGGCCAAACCACAGTTATCTC...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTGAGATAACTGTGGTTTaGCCTGAGGGATGGATGGTT +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVEITVV*PEGWMV
Trigger: AACCATCCATCCCTCAGGCCAAACCACAGTTATCTC...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGCACTCAGGGTCAAAATaGCCAGGTGGACGATCAACT +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPHSGSK*PGGRST
Trigger: AGTTGATCGTCCACCTGGCCATTTTGACCCTGAGTG...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CTGGAAGCCTTTCTCACTAATGTCCTTTCTCTGCTCCAGGATCCAAACCAGGATCTATCAGCTGCTTCCTaGAAGCCTTTCTCACTAATG +
Preference number: 4 (lower is better)
Translates to: LEAFLTNVLSLLQDPNQDLSAAS*KPFSLM
Trigger: CATTAGTGAGAAAGGCTTCCAGGAAGCAGCTGATAG...ATCCTGGTTTGGATCCTGGAGCAGAGAAAGGACATTAGTGAGAAAGGCTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588532.5
CDS-3UTR TCA 90 bp ACAGCTATCAAAGGCAGCAATTTTCTCCTGCAAGACTACGACAAGGATCCGTTTCTCCCCAGTACGAAGTaGATACAGATCCACACAACA +
Preference number: 4 (lower is better)
Translates to: TAIKGSNFLLQDYDKDPFLPSTK*IQIHTT
Trigger: TGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAG...AAACGGATCCTTGTCGTAGTCTTGCAGGAGAAAATTGCTGCCTTTGATAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586241.1
ENST00000592848.5
CDS-3UTR TCA 90 bp CAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGAAAGACAAACTCTTCCCACAAGGGTGTCTGTTGTaGCTAGAAGCATTCCACTTG +
Preference number: 4 (lower is better)
Translates to: QYRTRVKGLKDKKDKLFPQGCLL*LEAFHL
Trigger: CAAGTGGAATGCTTCTAGTCACAACAGACACCCTTG...TGGGAAGAGTTTGTCTTTCTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTGATGAGGACCAAGGATaGGTCAGAATTTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSDEDQG*VRIWKT
Trigger: TGTCTTCCAAATTCTGACTCATCCTTGGTCCTCATC...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGTCAGTTTCTCCCCTGTaGAGAGTATACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPSVSPL*RVYRWW
Trigger: CCACCATCTGTATACTCTTCACAGGGGAGAAACTGA...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACCACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATATTCACTACTCGTGGTaGCATATGTGTACGAACACA +
Preference number: 4 (lower is better)
Translates to: TTVSFTDQYRTRVKGLKDIHYSW*HMCTNT
Trigger: TGTGTTCGTACACATATGTCACCACGAGTAGTGAAT...ATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTATTCACTACTCGTGGTaGCATATGTGTACGAACACA +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGIHYSW*HMCTNT
Trigger: TGTGTTCGTACACATATGTCACCACGAGTAGTGAAT...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAATTCACTACTCGTGGTaGCATATGTGTACGAACACA +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASIHYSW*HMCTNT
Trigger: TGTGTTCGTACACATATGTCACCACGAGTAGTGAAT...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTTCATCGATTTGCTGGGTaGAATTTGTGGAGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: VIYWTRRALFNRASVTTVHRFAG*NLWRRF
Trigger: AAACCTCCTCCACAAATTTCACCCAGCAAATCGATG...AACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR TCA 90 bp GCACTTTTCAACAGGGCCTCAGTAACCACGGTTTCCTTCACTGATCAGTACAGGATTATTTGCAAACCATaGCCTGGATGTTCCGAAGAT +
Preference number: 4 (lower is better)
Translates to: ALFNRASVTTVSFTDQYRIICKP*PGCSED
Trigger: ATCTTCGGAACATCCAGGTCATGGTTTGCAAATAAT...CCTGTACTGATCAGTGAAGGAAACCGTGGTTACTGAGGCCCTGTTGAAAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp TCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTAGAGAAGAGCTCTTGTaGTTCACCACTGATAGGGAT +
Preference number: 4 (lower is better)
Translates to: SNAGCHMQTYTGTELLQSREELL*FTTDRD
Trigger: ATCCCTATCAGTGGTGAAGCACAAGAGCTCTTCTCT...AGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACATGCCAGAAGATCCAATaGTCTTACAAACACCAAGGA +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTCQKIQ*SYKHQG
Trigger: TCCTTGGTGTTTGTAAGAGCATTGGATCTTCTGGCA...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACCAACTGCAGCGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCATGCCAGAAGATCCAATaGTCTTACAAACACCAAGGA +
Preference number: 4 (lower is better)
Translates to: TNCSVIYWTRRALFNRASCQKIQ*SYKHQG
Trigger: TCCTTGGTGTTTGTAAGAGCATTGGATCTTCTGGCA...TGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACGCTGCAGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTAAATCAACTTGTTTTCTaGATAAGCAAGCCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: SGSNAGCHMQTYTGTELLNQLVF*ISKPAA
Trigger: AGCCGCTGGCTTGCTTATGCAGAAAACAAGTTGATT...TAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGCTACAGCGACCTCCTTaGTTAGACGTCAGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPLQRPP*LDVSSC
Trigger: ACAAGAACTGACGTCTAAGCAAGGAGGTCGCTGTAG...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AAAATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCTGTTCAGTTTCCCATaGAAGGGTGACCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: KIQKRIQCRMSYANIHRDLFSFP*KGDPEG
Trigger: CCCTTCTGGGTCACCCTTGCATGGGAAACTGAACAG...GTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGCCCAATGTCATTGGCTaGTTGATTTGTGCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NTKADPMQDVICKHTQGPPNVIG*LICARG
Trigger: GCCTCTTGCACAAATCAAGCAGCCAATGACATTGGG...CGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp AAAATACAAAAGCGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACATACTGTACTGCATCTaGAGCGAGGAGCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KIQKRIQCRMSYANIHRDILYCI*SEEQRV
Trigger: CACCCTCTGCTCCTCGCTGCAGATGCAGTACAGTAT...GTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCGCTTTTGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACAGTCTCTATGCAGGATGTCATATaGAAACATACACAGGGACCG +
Preference number: 4 (lower is better)
Translates to: QCRMSYANIHRDRASTVSMQDVI*KHTQGP
Trigger: CGGTCCCTGTGTATGTTTGCATATGACATCCTGCAT...AGAGACTGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp ACGGTTTCCTTCACTGATCAGTACAGGACCAGGGTAAAGGGGCTTAAAGATAAGATGCAGGATGTCATATaGAAACATACACAGGGACCG +
Preference number: 4 (lower is better)
Translates to: TVSFTDQYRTRVKGLKDKMQDVI*KHTQGP
Trigger: CGGTCCCTGTGTATGTTTGCATATGACATCCTGCAT...CTTATCTTTAAGCCCCTTTACCCTGGTCCTGTACTGATCAGTGAAGGAAACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR GCA 90 bp CGGATCCAATGCAGGATGTCATATGCAAACATACACAGGGACCGAGCTTCTACACAAAAGCGGATCCAATaGAGGATGTCATATGCAAAC +
Preference number: 4 (lower is better)
Translates to: RIQCRMSYANIHRDRASTQKRIQ*RMSYAN
Trigger: GTTTGCATATGACATCCTGCATTGGATCCGCTTTTG...TGTAGAAGCTCGGTCCCTGTGTATGTTTGCATATGACATCCTGCATTGGATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp CGTGATTTATTGGACAAGACGTGCACTTTTCAACAGGGCCTCAGTAACCACGGTAATAGGATTCATGTTTaGCCCTGGACATGGATAGCA +
Preference number: 4 (lower is better)
Translates to: RDLLDKTCTFQQGLSNHGNRIHV*PWTWIA
Trigger: TGCTATCCATGTCCAGGGCCAAACATGAATCCTATT...ACCGTGGTTACTGAGGCCCTGTTGAAAAGTGCACGTCTTGTCCAATAAATCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000390652.9
ENST00000407086.8
ENST00000408905.7
ENST00000588462.5
ENST00000588874.5
ENST00000589222.5
CDS-3UTR CCA 90 bp GACTTGACCATCTCCCCAGTACGAAGTGAATACAGATCCACACAACAGTACGGTAATAGGATTCATGTTTaGCCCTGGACATGGATAGCA +
Preference number: 4 (lower is better)
Translates to: DLTISPVRSEYRSTQQYGNRIHV*PWTWIA
Trigger: TGCTATCCATGTCCAGGGCCAAACATGAATCCTATT...ACCGTACTGTTGTGTGGATCTGTATTCACTTCGTACTGGGGAGATGGTCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts: