RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for BCAR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000137936

Ensembl transcript IDs: ENST00000260502.11, ENST00000370243.1, ENST00000370244.5, ENST00000370247.7, ENST00000433544.1, ENST00000466632.1, ENST00000469315.1, ENST00000479503.2, ENST00000490377.1, ENST00000538653.1, ENST00000539242.5, ENST00000649852.1

Found 510 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCTGGCCGCCAATCGCTaGGCGCTCCCCGCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACLAANR*ALPAVG
Trigger: GCCCACGGCGGGGAGCGCTCAGCGATTGGCGGCCAG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCTGGGCCCTCGCATCTaGCCGACCCCGGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSLGPRI*PTPAGF
Trigger: GAAGCCGGCCGGGGTCGGGCAGATGCGAGGGCCCAG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCGGGACAGGGCGGGGTaGCCGGCAGAGCAGCTCCGA +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSRDRAG*PAEQLR
Trigger: TCGGAGCTGCTCTGCCGGCCACCCCGCCCTGTCCCG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCGGCAGCCGGGGGAGTaGGTCGGCTCCTTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSRQPGE*VGSFSQ
Trigger: CTGGGAGAAGGAGCCGACTCACTCCCCCGGCTGCCG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370247.7
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTACCCCGGCCGGCTTCTaGGAAGAGGGGACGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACTPAGF*EEGTGG
Trigger: CCCGCCCGTCCCCTCTTCGCAGAAGCCGGCCGGGGT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTAGCTGGGGACGCTCATaGTCCGCGGGGCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACSWGRS*SAGRAR
Trigger: GCGGGCACGCCCCGCGGACCATGAGCGTCCCCAGCT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260502.11
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGAGCGCTCCCCGCCGTaGGCCACGTCTCGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACERSPP*ATSRGV
Trigger: GACTCCCCGAGACGTGGCCCACGGCGGGGAGCGCTC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCCCAGCCCTGGCGTCTaGGGAGACCCTCCGAACCAC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSPSPGV*GDPPNH
Trigger: GTGGTTCGGAGGGTCTCCTCAGACGCCAGGGCTGGG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGGCTGCTCCCGGAGCTaGGGACGCTCATGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACGCSRS*GRSWSA
Trigger: CGCGGACCATGAGCGTCCCCAGCTCCGGGAGCAGCC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260502.11
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCTCTGGACCTCCGGCTaGGGCTCAAAGGCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARLWTSG*GSKAPR
Trigger: GCGCGGCGCCTTTGAGCCCCAGCCGGAGGTCCAGAG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260502.11
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGCGCCTCCCCAGCCCTaGCGTCTGAGGAGACCCTCC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACAPPQP*RLRRPS
Trigger: GGAGGGTCTCCTCAGACGCCAGGGCTGGGGAGGCGC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGCGCCTCCCCAGCCCTaGCGTCTGAGGAGACCCTCC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARAPPQP*RLRRPS
Trigger: GGAGGGTCTCCTCAGACGCCAGGGCTGGGGAGGCGC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGGACGCCACCCATGGTaGGGCTCAGCCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSGRHPW*GSASWP
Trigger: TGGCCAAGAGGCTGAGCCTCACCATGGGTGGCGTCC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCCCAGCCCTGGCGTCTaGGGAGACCCTCCGAACCAC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACPSPGV*GDPPNH
Trigger: GTGGTTCGGAGGGTCTCCTCAGACGCCAGGGCTGGG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTCGCCGTGCCGGTCCTaGCATGGGCTCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSPCRS*HGLSWM
Trigger: CATCCAGGAGAGCCCATGGCAGGACCGGCACGGCGA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTATGATGGCGCCACTCTaGTGGGAGATGGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSMMAPL*WEMGRR
Trigger: CCGCCGGCCCATCTCCCAGCAGAGTGGCGCCATCAT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCAGCGCCCGGGAAGATaGCGCTCGAGTGCCACCGAG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACQRPGR*RSSATE
Trigger: CTCGGTGGCACTCGAGCGGCATCTTCCCGGGCGCTG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCACTCTGCTGGGAGATaGGCCGGCGGTTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSHSAGR*AGGCPR
Trigger: ACGTGGGCAACCGCCGGCCCATCTCCCAGCAGAGTG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCTCCCGGGCCTGGCCTaGGGAGGTGCCATAATGCTC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSLPGLA*GGAIML
Trigger: GAGCATTATGGCACCTCCCCAGGCCAGGCCCGGGAG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCCTCCGAACCACTGCTaGGCTCAGGGCAGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSPPNHC*AQGRLA
Trigger: AGCGAGCCTGCCCTGAGCCCAGCAGTGGTTCGGAGG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTCCACCAGAGCGCTCTaGGCCCTCGCATCTGCCCGA +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSTRAL*ALASAR
Trigger: TCGGGCAGATGCGAGGGCCCAGAGCGCTCTGGTGGA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGGCTGTAGGCCTCGCTaGGTCGCAGAACTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSGCRPR*VAELSG
Trigger: ACCGGACAGTTCTGCGACTCAGCGAGGCCTACAGCC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGGACGCCACCCATGGTaGGGCTCAGCCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARGRHPW*GSASWP
Trigger: TGGCCAAGAGGCTGAGCCTCACCATGGGTGGCGTCC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGGACGCCACCCATGGTaGGGCTCAGCCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACGRHPW*GSASWP
Trigger: TGGCCAAGAGGCTGAGCCTCACCATGGGTGGCGTCC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCTTCTGTCCTGCATGTaGTCCAGGCAGGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSLLSCM*SRQAGW
Trigger: CCAGCCCGCCTGCCTGGATCACATGCAGGACAGAAG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTCCACACCCGAGGACTaGGGTGGCAGCTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSTPED*GGSLQP
Trigger: TGGCTGCAAGCTGCCACCTCAGTCCTCGGGTGTGGA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGCACAGTTGACTGTCTaGTCCCCTCAGCGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSAQLTV*SPQRLP
Trigger: GGGGAGGCGCTGAGGGGATCAGACAGTCAACTGTGC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCGCCGTGCCGGTCCTaGCATGGGCTCTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARSPCRS*HGLSWM
Trigger: CATCCAGGAGAGCCCATGGCAGGACCGGCACGGCGA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGTGAAGGTTTCGCCGTaGCGGTCCTGCCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSVKVSP*RSCHGL
Trigger: GAGCCCATGGCAGGACCGGCACGGCGAAACCTTCAC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTGCGCAGGTCCTCGCTaGTCAGGAGCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSCAGPR*SGAAPP
Trigger: AGGAGGAGCTGCTCCTGAGCAGCGAGGACCTGCGCA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTAGATGGGCCGGCGGTTaGCCACGTAGCAGCGCACCA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACRWAGG*PRSSAP
Trigger: TGGTGCGCTGCTACGTGGGCAACCGCCGGCCCATCT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGAGATGGGCCGGCGGTTaGCCACGTAGCAGCGCACCA +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARRWAGG*PRSSAP
Trigger: TGGTGCGCTGCTACGTGGGCAACCGCCGGCCCATCT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATGATGGCGCCACTCTaGTGGGAGATGGGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARMMAPL*WEMGRR
Trigger: CCGCCGGCCCATCTCCCAGCAGAGTGGCGCCATCAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCCTGGCCTGGGGAGGTaGCATAATGCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSPGLGR*HNAPPG
Trigger: GCCTGGAGGAGCATTATGGCACCTCCCCAGGCCAGG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCCCCTGGGCAAATTCTaGTCTCGGGCCTGGACGCCA +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSPLGKF*SRAWTP
Trigger: TGGCGTCCAGGCCCGAGAGCAGAATTTGCCCAGGGG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTCTGCCGTGGGGATTTaGAGTGGGGGAGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSAVGI*SGGGCP
Trigger: TGGGCACCCTCCCCCACTCCAAATCCCCACGGCAGA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCACTCTGCTGGGAGATaGGCCGGCGGTTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACHSAGR*AGGCPR
Trigger: ACGTGGGCAACCGCCGGCCCATCTCCCAGCAGAGTG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCACTCTGCTGGGAGATaGGCCGGCGGTTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARHSAGR*AGGCPR
Trigger: ACGTGGGCAACCGCCGGCCCATCTCCCAGCAGAGTG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATGGCGCCACTCTGCTaGGAGATGGGCCGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARMAPLC*EMGRRL
Trigger: CAACCGCCGGCCCATCTCCCAGCAGAGTGGCGCCAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTATGGCGCCACTCTGCTaGGAGATGGGCCGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACMAPLC*EMGRRL
Trigger: CAACCGCCGGCCCATCTCCCAGCAGAGTGGCGCCAT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCTCCCGGGCCTGGCCTaGGGAGGTGCCATAATGCTC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACLPGLA*GGAIML
Trigger: GAGCATTATGGCACCTCCCCAGGCCAGGCCCGGGAG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTTCTGCTCTCGGGCCTaGACGCCACCCATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSFCSRA*TPPMVR
Trigger: CCTCACCATGGGTGGCGTCCAGGCCCGAGAGCAGAA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCCTCCGAACCACTGCTaGGCTCAGGGCAGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARPPNHC*AQGRLA
Trigger: AGCGAGCCTGCCCTGAGCCCAGCAGTGGTTCGGAGG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCCTCCGAACCACTGCTaGGCTCAGGGCAGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACPPNHC*AQGRLA
Trigger: AGCGAGCCTGCCCTGAGCCCAGCAGTGGTTCGGAGG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGCCTCCTCGGAGCCTTaGGCTTCCACCAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARASSEP*ASTRAL
Trigger: GAGCGCTCTGGTGGAAGCCCAAGGCTCCGAGGAGGC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCGGGGGTCCTGTCCATaGTGTGCCTCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSRGSCP*CASPWR
Trigger: TCTCCAAGGAGAGGCACATCATGGACAGGACCCCCG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGGCTGTAGGCCTCGCTaGGTCGCAGAACTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARGCRPR*VAELSG
Trigger: ACCGGACAGTTCTGCGACTCAGCGAGGCCTACAGCC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGGCTGTAGGCCTCGCTaGGTCGCAGAACTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACGCRPR*VAELSG
Trigger: ACCGGACAGTTCTGCGACTCAGCGAGGCCTACAGCC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCTTCTGTCCTGCATGTaGTCCAGGCAGGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARLLSCM*SRQAGW
Trigger: CCAGCCCGCCTGCCTGGATCACATGCAGGACAGAAG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCTTCTGTCCTGCATGTaGTCCAGGCAGGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACLLSCM*SRQAGW
Trigger: CCAGCCCGCCTGCCTGGATCACATGCAGGACAGAAG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCGGCAGGTAGCTCTCTaGCTGGTGGGCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSRQVAL*LVGFEG
Trigger: TCCCTCAAAGCCCACCAGTCAGAGAGCTACCTGCCG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTCCACACCCGAGGACTaGGGTGGCAGCTTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACSTPED*GGSLQP
Trigger: TGGCTGCAAGCTGCCACCTCAGTCCTCGGGTGTGGA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGCTCGCTTCCCGTCCTaGACACAGGTGAGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSARFPS*TQVSLG
Trigger: GCCCAAACTCACCTGTGTTCAGGACGGGAAGCGAGC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGCACAGTTGACTGTCTaGTCCCCTCAGCGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACAQLTV*SPQRLP
Trigger: GGGGAGGCGCTGAGGGGATCAGACAGTCAACTGTGC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGAGACGAGGGAACCTTaGGGAACGGCACCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSETREP*GTAPCR
Trigger: CCTGCAAGGTGCCGTTCCTCAAGGTTCCCTCGTCTC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTAGTTGGCCTCTGAGTTaGGCCAGGCAGAGGGAGACG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSWPLS*ARQRET
Trigger: CGTCTCCCTCTGCCTGGCTCAACTCAGAGGCCAACT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCCACCGCCACCTGGATaGTCTTACTCAGAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSPPPPG*SYSEWP
Trigger: CGGCCACTCTGAGTAAGATCATCCAGGTGGCGGTGG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGCAGCACAGAGCTGCTaGGAGGGCGTGGAAAGCACT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSAAQSC*EGVEST
Trigger: AGTGCTTTCCACGCCCTCTCAGCAGCTCTGTGCTGC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370247.7
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCAGCGAGAGGGGACCTaGTGCTCAGAAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSQREGT*CSEGPW
Trigger: CCATGGACCTTCTGAGCAGCAGGTCCCCTCTCGCTG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGTGAAGGTTTCGCCGTaGCGGTCCTGCCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACVKVSP*RSCHGL
Trigger: GAGCCCATGGCAGGACCGGCACGGCGAAACCTTCAC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGTGAAGGTTTCGCCGTaGCGGTCCTGCCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARVKVSP*RSCHGL
Trigger: GAGCCCATGGCAGGACCGGCACGGCGAAACCTTCAC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTGCGCAGGTCCTCGCTaGTCAGGAGCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACCAGPR*SGAAPP
Trigger: AGGAGGAGCTGCTCCTGAGCAGCGAGGACCTGCGCA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTGCGCAGGTCCTCGCTaGTCAGGAGCAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARCAGPR*SGAAPP
Trigger: AGGAGGAGCTGCTCCTGAGCAGCGAGGACCTGCGCA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCCTGGCCTGGGGAGGTaGCATAATGCTCCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARPGLGR*HNAPPG
Trigger: GCCTGGAGGAGCATTATGGCACCTCCCCAGGCCAGG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCCCCTGGGCAAATTCTaGTCTCGGGCCTGGACGCCA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACPLGKF*SRAWTP
Trigger: TGGCGTCCAGGCCCGAGAGCAGAATTTGCCCAGGGG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGTAGCTTTGCTCCCCTaGCGCAGCCTGTGGCAAACG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSVALLP*RSLWQT
Trigger: CGTTTGCCACAGGCTGCGGCAGGGGAGCAAAGCTAC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGGCTCTCAGGATCTCTaGACCTCCGGCTGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARGSQDL*TSGWGS
Trigger: TGAGCCCCAGCCGGAGGTCCAGAGATCCTGAGAGCC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260502.11
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTCTGCCGTGGGGATTTaGAGTGGGGGAGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACSAVGI*SGGGCP
Trigger: TGGGCACCCTCCCCCACTCCAAATCCCCACGGCAGA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGCACCAGGCCGGGGATaGAGTCGAAGCTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSAPGRG*SRSSPS
Trigger: AGATGGAGAGCTTCGACTCCATCCCCGGCCTGGTGC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTTCTGCTCTCGGGCCTaGACGCCACCCATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACFCSRA*TPPMVR
Trigger: CCTCACCATGGGTGGCGTCCAGGCCCGAGAGCAGAA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTTCTGCTCTCGGGCCTaGACGCCACCCATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARFCSRA*TPPMVR
Trigger: CCTCACCATGGGTGGCGTCCAGGCCCGAGAGCAGAA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTACCCGAGGACTGAGGTaGCAGCTTGCAGCCAATCGG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSTRGLR*QLAANR
Trigger: CCGATTGGCTGCAAGCTGCCACCTCAGTCCTCGGGT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCCCTGCCGCAGCCTGTaGCAAACGCTGGGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSPCRSL*QTLGSV
Trigger: AACTGAACCCAGCGTTTGCCACAGGCTGCGGCAGGG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTACCGAGCAAGATGCCTaGCCGCCAATCGCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACTEQDA*PPIAER
Trigger: GCGCTCAGCGATTGGCGGCCAGGCATCTTGCTCGGT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGGGAGGGTGCCCATGTaGCTGAAGTCATCACAGGAC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSGRVPM*LKSSQD
Trigger: GTCCTGTGATGACTTCAGTCACATGGGCACCCTCCC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCGGGGGTCCTGTCCATaGTGTGCCTCTCCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACRGSCP*CASPWR
Trigger: TCTCCAAGGAGAGGCACATCATGGACAGGACCCCCG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCGGCAGGTAGCTCTCTaGCTGGTGGGCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARRQVAL*LVGFEG
Trigger: TCCCTCAAAGCCCACCAGTCAGAGAGCTACCTGCCG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCGGCAGGTAGCTCTCTaGCTGGTGGGCTTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACRQVAL*LVGFEG
Trigger: TCCCTCAAAGCCCACCAGTCAGAGAGCTACCTGCCG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGCTCGCTTCCCGTCCTaGACACAGGTGAGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACARFPS*TQVSLG
Trigger: GCCCAAACTCACCTGTGTTCAGGACGGGAAGCGAGC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGGCTTAGGGCACAGTTaGCTGTCTGATCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSGLGHS*LSDPLS
Trigger: GCTGAGGGGATCAGACAGTCAACTGTGCCCTAAGCC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGAGACGAGGGAACCTTaGGGAACGGCACCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACETREP*GTAPCR
Trigger: CCTGCAAGGTGCCGTTCCTCAAGGTTCCCTCGTCTC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGAGACGAGGGAACCTTaGGGAACGGCACCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARETREP*GTAPCR
Trigger: CCTGCAAGGTGCCGTTCCTCAAGGTTCCCTCGTCTC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTAGTTGGCCTCTGAGTTaGGCCAGGCAGAGGGAGACG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACSWPLS*ARQRET
Trigger: CGTCTCCCTCTGCCTGGCTCAACTCAGAGGCCAACT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCGCAGCTGGTGTCCGTaGGGCAAGGTAATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSRSWCP*GKVMSS
Trigger: GGAACTCATTACCTTGCCTCACGGACACCAGCTGCG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCCACCGCCACCTGGATaGTCTTACTCAGAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACPPPPG*SYSEWP
Trigger: CGGCCACTCTGAGTAAGATCATCCAGGTGGCGGTGG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCCACCGCCACCTGGATaGTCTTACTCAGAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARPPPPG*SYSEWP
Trigger: CGGCCACTCTGAGTAAGATCATCCAGGTGGCGGTGG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCAGCGAGAGGGGACCTaGTGCTCAGAAGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACQREGT*CSEGPW
Trigger: CCATGGACCTTCTGAGCAGCAGGTCCCCTCTCGCTG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGTCACAGGCGAGTTCTaGCGTGGGGATTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSVTGEF*RGDLEW
Trigger: CCACTCCAAATCCCCACGGCAGAACTCGCCTGTGAC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTATGGGCTCTCCTGGATaGCATCCTGGGTCACAGGCG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACMGSPG*HPGSQA
Trigger: CGCCTGTGACCCAGGATGGCATCCAGGAGAGCCCAT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATGGGCTCTCCTGGATaGCATCCTGGGTCACAGGCG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARMGSPG*HPGSQA
Trigger: CGCCTGTGACCCAGGATGGCATCCAGGAGAGCCCAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGTAGCTTTGCTCCCCTaGCGCAGCCTGTGGCAAACG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARVALLP*RSLWQT
Trigger: CGTTTGCCACAGGCTGCGGCAGGGGAGCAAAGCTAC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGTAGCTTTGCTCCCCTaGCGCAGCCTGTGGCAAACG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACVALLP*RSLWQT
Trigger: CGTTTGCCACAGGCTGCGGCAGGGGAGCAAAGCTAC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTCCATGCTCAGTACGTaGTGGGCGATGACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSMLST*WAMTLG
Trigger: CCCCAAGGTCATCGCCCAGCACGTACTGAGCATGGA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGTTTGGGTGTACTGGTaGCGCAGAGCAGTCCACGTC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSVWVYW*RRAVHV
Trigger: GACGTGGACTGCTCTGCGGCACCAGTACACCCAAAC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCATCCGGTAGCTGTCTaGAGCCTCGGCCATGAATCG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSHPVAV*SLGHES
Trigger: CGATTCATGGCCGAGGCTGCAGACAGCTACCGGATG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTAGGCGAGTTCTGCCGTaGGGATTTGGAGTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACRRVLP*GFGVGE
Trigger: CTCCCCCACTCCAAATCCCCACGGCAGAACTCGCCT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGAGGCGAGTTCTGCCGTaGGGATTTGGAGTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARRRVLP*GFGVGE
Trigger: CTCCCCCACTCCAAATCCCCACGGCAGAACTCGCCT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTCCTGGATGCCATCCTaGGTCACAGGCGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSWMPS*VTGEFC
Trigger: GCAGAACTCGCCTGTGACCCAGGATGGCATCCAGGA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTGCCATGGGCTCTCCTaGATGCCATCCTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSCHGLS*MPSWVT
Trigger: TGTGACCCAGGATGGCATCCAGGAGAGCCCATGGCA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGCACCAGGCCGGGGATaGAGTCGAAGCTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACAPGRG*SRSSPS
Trigger: AGATGGAGAGCTTCGACTCCATCCCCGGCCTGGTGC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGCACCAGGCCGGGGATaGAGTCGAAGCTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARAPGRG*SRSSPS
Trigger: AGATGGAGAGCTTCGACTCCATCCCCGGCCTGGTGC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTACCCGAGGACTGAGGTaGCAGCTTGCAGCCAATCGG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACTRGLR*QLAANR
Trigger: CCGATTGGCTGCAAGCTGCCACCTCAGTCCTCGGGT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGACCCGAGGACTGAGGTaGCAGCTTGCAGCCAATCGG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARTRGLR*QLAANR
Trigger: CCGATTGGCTGCAAGCTGCCACCTCAGTCCTCGGGT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCCCTGCCGCAGCCTGTaGCAAACGCTGGGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARPCRSL*QTLGSV
Trigger: AACTGAACCCAGCGTTTGCCACAGGCTGCGGCAGGG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTATGCTCAGTACGTGCTaGGCGATGACCTTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSMLSTC*AMTLGS
Trigger: CGACCCCAAGGTCATCGCCCAGCACGTACTGAGCAT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGCAGTTTGGGTGTACTaGTGCCGCAGAGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSAVWVY*CRRAVH
Trigger: GTGGACTGCTCTGCGGCACCAGTACACCCAAACTGC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGCCAGGGGGAACTGGTaGTTCACCGGCATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARARGNW*FTGMFL
Trigger: CAGAAACATGCCGGTGAATCACCAGTTCCCCCTGGC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGCCAGGGGGAACTGGTaGTTCACCGGCATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACARGNW*FTGMFL
Trigger: CAGAAACATGCCGGTGAATCACCAGTTCCCCCTGGC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCTGACTGGTGGGCTTTaGGGGACAAGGCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSLTGGL*GTRLFC
Trigger: ACAGAAGAGCCTTGTCCCTCAAAGCCCACCAGTCAG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGGCTTAGGGCACAGTTaGCTGTCTGATCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARGLGHS*LSDPLS
Trigger: GCTGAGGGGATCAGACAGTCAACTGTGCCCTAAGCC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGGCTTAGGGCACAGTTaGCTGTCTGATCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACGLGHS*LSDPLS
Trigger: GCTGAGGGGATCAGACAGTCAACTGTGCCCTAAGCC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCAAACTCGTTGGGCCTaGAGGAGGAGACAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSQTRWA*RRRQSP
Trigger: TGGAGACTGTCTCCTCCTTCAGGCCCAACGAGTTTG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCGCAGCTGGTGTCCGTaGGGCAAGGTAATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACRSWCP*GKVMSS
Trigger: GGAACTCATTACCTTGCCTCACGGACACCAGCTGCG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCTGCAGCCTCGGCCATaGATCGCGCTGTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARLQPRP*IALLPN
Trigger: ATTTGGCAACAGCGCGATTCATGGCCGAGGCTGCAG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCTGCAGCCTCGGCCATaGATCGCGCTGTTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACLQPRP*IALLPN
Trigger: ATTTGGCAACAGCGCGATTCATGGCCGAGGCTGCAG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGTCACAGGCGAGTTCTaGCGTGGGGATTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARVTGEF*RGDLEW
Trigger: CCACTCCAAATCCCCACGGCAGAACTCGCCTGTGAC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGTCACAGGCGAGTTCTaGCGTGGGGATTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACVTGEF*RGDLEW
Trigger: CCACTCCAAATCCCCACGGCAGAACTCGCCTGTGAC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCTTCTCCATCTGAGCTaGCGCAGGTTCCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSLLHLS*RRFPRS
Trigger: AGACCTTGGGAACCTGCGGCAGCTCAGATGGAGAAG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCCATGCTCAGTACGTaGTGGGCGATGACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARSMLST*WAMTLG
Trigger: CCCCAAGGTCATCGCCCAGCACGTACTGAGCATGGA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTCCATGCTCAGTACGTaGTGGGCGATGACCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACSMLST*WAMTLG
Trigger: CCCCAAGGTCATCGCCCAGCACGTACTGAGCATGGA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCAACCCTGCAGTCCATaGTCAGTACGTGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARQPCSP*SVRAGR
Trigger: TCGCCCAGCACGTACTGAGCATGGACTGCAGGGTTG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGTTTGGGTGTACTGGTaGCGCAGAGCAGTCCACGTC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARVWVYW*RRAVHV
Trigger: GACGTGGACTGCTCTGCGGCACCAGTACACCCAAAC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGTTTGGGTGTACTGGTaGCGCAGAGCAGTCCACGTC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACVWVYW*RRAVHV
Trigger: GACGTGGACTGCTCTGCGGCACCAGTACACCCAAAC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCATCCGGTAGCTGTCTaGAGCCTCGGCCATGAATCG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACHPVAV*SLGHES
Trigger: CGATTCATGGCCGAGGCTGCAGACAGCTACCGGATG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCATCCGGTAGCTGTCTaGAGCCTCGGCCATGAATCG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARHPVAV*SLGHES
Trigger: CGATTCATGGCCGAGGCTGCAGACAGCTACCGGATG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGAAGATGCCGCTCGAGTaGCACCGAGCAAGATGCCTG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARKMPLE*HRARCL
Trigger: CAGGCATCTTGCTCGGTGGCACTCGAGCGGCATCTT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTCCTGGATGCCATCCTaGGTCACAGGCGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACSWMPS*VTGEFC
Trigger: GCAGAACTCGCCTGTGACCCAGGATGGCATCCAGGA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTGCCATGGGCTCTCCTaGATGCCATCCTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACCHGLS*MPSWVT
Trigger: TGTGACCCAGGATGGCATCCAGGAGAGCCCATGGCA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTGCCATGGGCTCTCCTaGATGCCATCCTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARCHGLS*MPSWVT
Trigger: TGTGACCCAGGATGGCATCCAGGAGAGCCCATGGCA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGTCCTGTTGATGGGCTaGAAGATGATGGCGCCACTC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSVLLMG*KMMAPL
Trigger: GAGTGGCGCCATCATCTTCCAGCCCATCAACAGGAC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTCCAGGCAGGCGGGCTaGCTACCACTCTTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSRQAG*LPLFSL
Trigger: CAAAGAAAAGAGTGGTAGCCAGCCCGCCTGCCTGGA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGTGAGCAGTTCTGTGTaGCTTCCCTGGGCACATGAG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSVSSSV*LPWAHE
Trigger: CTCATGTGCCCAGGGAAGCCACACAGAACTGCTCAC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTATGCTCAGTACGTGCTaGGCGATGACCTTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACMLSTC*AMTLGS
Trigger: CGACCCCAAGGTCATCGCCCAGCACGTACTGAGCAT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGCAGTTTGGGTGTACTaGTGCCGCAGAGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARAVWVY*CRRAVH
Trigger: GTGGACTGCTCTGCGGCACCAGTACACCCAAACTGC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGCAGTTTGGGTGTACTaGTGCCGCAGAGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACAVWVY*CRRAVH
Trigger: GTGGACTGCTCTGCGGCACCAGTACACCCAAACTGC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCTGACTGGTGGGCTTTaGGGGACAAGGCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACLTGGL*GTRLFC
Trigger: ACAGAAGAGCCTTGTCCCTCAAAGCCCACCAGTCAG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCTGACTGGTGGGCTTTaGGGGACAAGGCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARLTGGL*GTRLFC
Trigger: ACAGAAGAGCCTTGTCCCTCAAAGCCCACCAGTCAG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCATTCTGCTTGGCTGTaGGCAGTTCTGTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSHSAWL*AVLCGF
Trigger: GAAGCCACACAGAACTGCTCACAGCCAAGCAGAATG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCAAACTCGTTGGGCCTaGAGGAGGAGACAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARQTRWA*RRRQSP
Trigger: TGGAGACTGTCTCCTCCTTCAGGCCCAACGAGTTTG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTAGGGGGAAGGAACTTTaGCTCAAACTCGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSRGKEL*LKLVGP
Trigger: AGGCCCAACGAGTTTGAGTCAAAGTTCCTTCCCCCT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGGCTTTCATGAGAGCTaGGAAGGAATAGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSGFHES*EGIEVP
Trigger: GGGGACCTCTATTCCTTCTCAGCTCTCATGAAAGCC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCTTCTCCATCTGAGCTaGCGCAGGTTCCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACLLHLS*RRFPRS
Trigger: AGACCTTGGGAACCTGCGGCAGCTCAGATGGAGAAG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCCTCCAAAGTGCCCGTaGATCCCAGAATGTCCACTG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACPPKCP*IPECPL
Trigger: CAGTGGACATTCTGGGATGCACGGGCACTTTGGAGG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCCTCCAAAGTGCCCGTaGATCCCAGAATGTCCACTG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARPPKCP*IPECPL
Trigger: CAGTGGACATTCTGGGATGCACGGGCACTTTGGAGG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCTCGGTCCTCCAAAGTaGCCGTGCATCCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACLGPPK*PCIPEC
Trigger: ACATTCTGGGATGCACGGGCACTTTGGAGGACCGAG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGACTCTCTGCCTTCATaGAGGAGTTTGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSDSLPS*RSLLKG
Trigger: GCCCTTCAGCAAACTCCTGCATGAAGGCAGAGAGTC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTATCTTGATAGGCATCTaGGCGATGCTCAGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSILIGI*AMLSER
Trigger: CCTCTCGCTGAGCATCGCCCAGATGCCTATCAAGAT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGTCCTGTTGATGGGCTaGAAGATGATGGCGCCACTC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACVLLMG*KMMAPL
Trigger: GAGTGGCGCCATCATCTTCCAGCCCATCAACAGGAC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGTCCTGTTGATGGGCTaGAAGATGATGGCGCCACTC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARVLLMG*KMMAPL
Trigger: GAGTGGCGCCATCATCTTCCAGCCCATCAACAGGAC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTCCAGGCAGGCGGGCTaGCTACCACTCTTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACSRQAG*LPLFSL
Trigger: CAAAGAAAAGAGTGGTAGCCAGCCCGCCTGCCTGGA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCCAGGCAGGCGGGCTaGCTACCACTCTTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARSRQAG*LPLFSL
Trigger: CAAAGAAAAGAGTGGTAGCCAGCCCGCCTGCCTGGA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTCTGTGTGGCTTCCCTaGGCACATGAGGGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSVWLP*AHEGSF
Trigger: AAAGCTACCCTCATGTGCCCAGGGAAGCCACACAGA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGTGAGCAGTTCTGTGTaGCTTCCCTGGGCACATGAG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACVSSSV*LPWAHE
Trigger: CTCATGTGCCCAGGGAAGCCACACAGAACTGCTCAC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGTGAGCAGTTCTGTGTaGCTTCCCTGGGCACATGAG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARVSSSV*LPWAHE
Trigger: CTCATGTGCCCAGGGAAGCCACACAGAACTGCTCAC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGGGTGCCCATGTGACTaGAGTCATCACAGGACCTTA +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARGCPCD*SHHRTL
Trigger: TAAGGTCCTGTGATGACTTCAGTCACATGGGCACCC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGGGTGCCCATGTGACTaGAGTCATCACAGGACCTTA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACGCPCD*SHHRTL
Trigger: TAAGGTCCTGTGATGACTTCAGTCACATGGGCACCC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGCGAGGTTCTTCCACTaGCAGGTCAGGACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARARFFH*QVRTKF
Trigger: GAACTTTGTCCTGACCTGTCAGTGGAAGAACCTCGC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGCGAGGTTCTTCCACTaGCAGGTCAGGACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACARFFH*QVRTKF
Trigger: GAACTTTGTCCTGACCTGTCAGTGGAAGAACCTCGC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCATTCTGCTTGGCTGTaGGCAGTTCTGTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARHSAWL*AVLCGF
Trigger: GAAGCCACACAGAACTGCTCACAGCCAAGCAGAATG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCATTCTGCTTGGCTGTaGGCAGTTCTGTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACHSAWL*AVLCGF
Trigger: GAAGCCACACAGAACTGCTCACAGCCAAGCAGAATG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGAGGGGGAAGGAACTTTaGCTCAAACTCGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARRGKEL*LKLVGP
Trigger: AGGCCCAACGAGTTTGAGTCAAAGTTCCTTCCCCCT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTAGGGGGAAGGAACTTTaGCTCAAACTCGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACRGKEL*LKLVGP
Trigger: AGGCCCAACGAGTTTGAGTCAAAGTTCCTTCCCCCT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGGCTTTCATGAGAGCTaGGAAGGAATAGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACGFHES*EGIEVP
Trigger: GGGGACCTCTATTCCTTCTCAGCTCTCATGAAAGCC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGGCTTTCATGAGAGCTaGGAAGGAATAGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARGFHES*EGIEVP
Trigger: GGGGACCTCTATTCCTTCTCAGCTCTCATGAAAGCC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCATGCAGGAGTTTGCTaGAGGGCTTCAGCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSHAGVC*RASAVS
Trigger: AGAAACAGCTGAAGCCCTTCAGCAAACTCCTGCATG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCATCAGCAGTGGGACTaGTACATTGTTTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSHQQWD*YIVWGN
Trigger: GTTCCCCCAAACAATGTATCAGTCCCACTGCTGATG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCCAGCTTGGGTCAGATaGAGCAGCTCTGTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACPAWVR*SSSVWR
Trigger: TCTCCAAACAGAGCTGCTTCATCTGACCCAAGCTGG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTCCCAGAATGTCCACTaGAATGCCGATGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSQNVH*NADGHC
Trigger: ACAATGGCCATCGGCATTGCAGTGGACATTCTGGGA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGACTCTCTGCCTTCATaGAGGAGTTTGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARDSLPS*RSLLKG
Trigger: GCCCTTCAGCAAACTCCTGCATGAAGGCAGAGAGTC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGACTCTCTGCCTTCATaGAGGAGTTTGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACDSLPS*RSLLKG
Trigger: GCCCTTCAGCAAACTCCTGCATGAAGGCAGAGAGTC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATCTTGATAGGCATCTaGGCGATGCTCAGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARILIGI*AMLSER
Trigger: CCTCTCGCTGAGCATCGCCCAGATGCCTATCAAGAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTGGGTCCAGAAGATGTaGATCCCTGAAGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSWVQKM*IPEGEG
Trigger: ACCTTCACCTTCAGGGATCCACATCTTCTGGACCCA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCAAAGTTCCCAGGGCTaGACAGAGAGTCACGAACTA +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSQSSQG*TESHEL
Trigger: TAGTTCGTGACTCTCTGTCCAGCCCTGGGAACTTTG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGCCTGTGGCAAACGCTaGGTTCAGTTCACAGTAGTT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSACGKR*VQFTVV
Trigger: AACTACTGTGAACTGAACCCAGCGTTTGCCACAGGC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTGTGTGGCTTCCCTaGGCACATGAGGGTAGCTTT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARSVWLP*AHEGSF
Trigger: AAAGCTACCCTCATGTGCCCAGGGAAGCCACACAGA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTAGTTCCACCGCCACCTaGATGATCTTACTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSSTAT*MILLRV
Trigger: CACTCTGAGTAAGATCATCCAGGTGGCGGTGGAACT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTAATAGAGGTCCCCCATaGAATCCTTCAGTTCCACCG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSNRGPP*NPSVPP
Trigger: CGGTGGAACTGAAGGATTCCATGGGGGACCTCTATT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTTGGGGGAACACATGTaGACTCTCTGCCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSLGEHM*TLCLHA
Trigger: TGCATGAAGGCAGAGAGTCCACATGTGTTCCCCCAA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGCTGCTGAGAGGGCGTaGAAAGCACTGCATTCCTTA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACAAERA*KALHSL
Trigger: TAAGGAATGCAGTGCTTTCCACGCCCTCTCAGCAGC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370247.7
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTGGGGTCGTTGTTGGTaGACAGTTCTTTTGCACGTT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSWGRCW*TVLLHV
Trigger: AACGTGCAAAAGAACTGTTCACCAACAACGACCCCA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCATGCAGGAGTTTGCTaGAGGGCTTCAGCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACHAGVC*RASAVS
Trigger: AGAAACAGCTGAAGCCCTTCAGCAAACTCCTGCATG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCATGCAGGAGTTTGCTaGAGGGCTTCAGCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARHAGVC*RASAVS
Trigger: AGAAACAGCTGAAGCCCTTCAGCAAACTCCTGCATG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCATCAGCAGTGGGACTaGTACATTGTTTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARHQQWD*YIVWGN
Trigger: GTTCCCCCAAACAATGTATCAGTCCCACTGCTGATG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCCAAATGGTTCAGCATaGTTTCACAGCTCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSPNGSA*FHSSGR
Trigger: ACGACCAGAGCTGTGAAATCATGCTGAACCATTTGG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTATCTCTCTGTCTGATTaGCTTGTGCACCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSISLSD*LVHLCC
Trigger: GCAGCAAAGGTGCACAAGTCAATCAGACAGAGAGAT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTAAGTCACCATCTCGCTaGACAAGGTTTTCAGACACC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSKSPSR*TRFSDT
Trigger: GGTGTCTGAAAACCTTGTGCAGCGAGATGGTGACTT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGAATGTCCACTGCAATaGCGATGGCCATTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSECPLQ*RWPLCC
Trigger: ACAACACAATGGCCATCGGCATTGCAGTGGACATTC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCCCAGAATGTCCACTaGAATGCCGATGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARSQNVH*NADGHC
Trigger: ACAATGGCCATCGGCATTGCAGTGGACATTCTGGGA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCACATGTGGACTCTCTaGCTTCATGCAGGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARHMWTL*LHAGVC
Trigger: GCAAACTCCTGCATGAAGGCAGAGAGTCCACATGTG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCACATGTGGACTCTCTaGCTTCATGCAGGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACHMWTL*LHAGVC
Trigger: GCAAACTCCTGCATGAAGGCAGAGAGTCCACATGTG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCTTGTGCACCTTTGCTaGCCCATAGCAATCGCATTT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSLVHLC*PIAIAF
Trigger: AAATGCGATTGCTATGGGGCAGCAAAGGTGCACAAG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTATCAAAGCTCTGCCTaGTTTACAGGAGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSYQSSA*FTGGGS
Trigger: GGAACCTCCTCCTGTAAAGCAGGCAGAGCTTTGATA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTGGGTCCAGAAGATGTaGATCCCTGAAGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARWVQKM*IPEGEG
Trigger: ACCTTCACCTTCAGGGATCCACATCTTCTGGACCCA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTGGGTCCAGAAGATGTaGATCCCTGAAGGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACWVQKM*IPEGEG
Trigger: ACCTTCACCTTCAGGGATCCACATCTTCTGGACCCA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCAAAGTTCCCAGGGCTaGACAGAGAGTCACGAACTA +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARQSSQG*TESHEL
Trigger: TAGTTCGTGACTCTCTGTCCAGCCCTGGGAACTTTG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGCCTGTGGCAAACGCTaGGTTCAGTTCACAGTAGTT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACACGKR*VQFTVV
Trigger: AACTACTGTGAACTGAACCCAGCGTTTGCCACAGGC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGCCTGTGGCAAACGCTaGGTTCAGTTCACAGTAGTT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARACGKR*VQFTVV
Trigger: AACTACTGTGAACTGAACCCAGCGTTTGCCACAGGC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCCACTGCAATGCCGATaGCCATTGTGTTGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSPLQCR*PLCCVF
Trigger: AAAGACACAACACAATGGCCATCGGCATTGCAGTGG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTAGTTCCACCGCCACCTaGATGATCTTACTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACSSTAT*MILLRV
Trigger: CACTCTGAGTAAGATCATCCAGGTGGCGGTGGAACT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGAGTTCCACCGCCACCTaGATGATCTTACTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARSSTAT*MILLRV
Trigger: CACTCTGAGTAAGATCATCCAGGTGGCGGTGGAACT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGAATAGAGGTCCCCCATaGAATCCTTCAGTTCCACCG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARNRGPP*NPSVPP
Trigger: CGGTGGAACTGAAGGATTCCATGGGGGACCTCTATT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTAATAGAGGTCCCCCATaGAATCCTTCAGTTCCACCG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACNRGPP*NPSVPP
Trigger: CGGTGGAACTGAAGGATTCCATGGGGGACCTCTATT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTTGGGGGAACACATGTaGACTCTCTGCCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARLGEHM*TLCLHA
Trigger: TGCATGAAGGCAGAGAGTCCACATGTGTTCCCCCAA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTTGGGGGAACACATGTaGACTCTCTGCCTTCATGCA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACLGEHM*TLCLHA
Trigger: TGCATGAAGGCAGAGAGTCCACATGTGTTCCCCCAA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTGGGGTCGTTGTTGGTaGACAGTTCTTTTGCACGTT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACWGRCW*TVLLHV
Trigger: AACGTGCAAAAGAACTGTTCACCAACAACGACCCCA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTGGGGTCGTTGTTGGTaGACAGTTCTTTTGCACGTT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARWGRCW*TVLLHV
Trigger: AACGTGCAAAAGAACTGTTCACCAACAACGACCCCA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTCTTTTCTAACCTTGTaGTCTGTGGCATTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSFLTL*SVAFPG
Trigger: CCCTGGAAATGCCACAGATCACAAGGTTAGAAAAGA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCCAAATGGTTCAGCATaGTTTCACAGCTCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACPNGSA*FHSSGR
Trigger: ACGACCAGAGCTGTGAAATCATGCTGAACCATTTGG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCCAAATGGTTCAGCATaGTTTCACAGCTCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARPNGSA*FHSSGR
Trigger: ACGACCAGAGCTGTGAAATCATGCTGAACCATTTGG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTATTTCTTCATCTGGTTaGAAACCTGCCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSISSSG*KPARIL
Trigger: GAGGATCCTGGCAGGTTTTCAACCAGATGAAGAAAT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATCTCTCTGTCTGATTaGCTTGTGCACCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARISLSD*LVHLCC
Trigger: GCAGCAAAGGTGCACAAGTCAATCAGACAGAGAGAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTATCTCTCTGTCTGATTaGCTTGTGCACCTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACISLSD*LVHLCC
Trigger: GCAGCAAAGGTGCACAAGTCAATCAGACAGAGAGAT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGTTTCTGGGAAGGCTTaGAAATTTTCCTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSVSGKA*KFSCSH
Trigger: ATGGCTGCAGGAAAATTTGCAAGCCTTCCCAGAAAC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGAAGTCACCATCTCGCTaGACAAGGTTTTCAGACACC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARKSPSR*TRFSDT
Trigger: GGTGTCTGAAAACCTTGTGCAGCGAGATGGTGACTT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTAAGTCACCATCTCGCTaGACAAGGTTTTCAGACACC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACKSPSR*TRFSDT
Trigger: GGTGTCTGAAAACCTTGTGCAGCGAGATGGTGACTT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGAATGTCCACTGCAATaGCGATGGCCATTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARECPLQ*RWPLCC
Trigger: ACAACACAATGGCCATCGGCATTGCAGTGGACATTC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGAATGTCCACTGCAATaGCGATGGCCATTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACECPLQ*RWPLCC
Trigger: ACAACACAATGGCCATCGGCATTGCAGTGGACATTC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCATGAATCGCGCTGTTaGCAAATGGTTCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSHESRC*QMVQHD
Trigger: ATCATGCTGAACCATTTGGCAACAGCGCGATTCATG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTATCTGGTTGAAAACCTaGCAGGATCCTCTCAGCATT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSIWLKT*QDPLSI
Trigger: AATGCTGAGAGGATCCTGGCAGGTTTTCAACCAGAT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCTTGTGCACCTTTGCTaGCCCATAGCAATCGCATTT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARLVHLC*PIAIAF
Trigger: AAATGCGATTGCTATGGGGCAGCAAAGGTGCACAAG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTATCAAAGCTCTGCCTaGTTTACAGGAGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARYQSSA*FTGGGS
Trigger: GGAACCTCCTCCTGTAAAGCAGGCAGAGCTTTGATA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTATCAAAGCTCTGCCTaGTTTACAGGAGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACYQSSA*FTGGGS
Trigger: GGAACCTCCTCCTGTAAAGCAGGCAGAGCTTTGATA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGAGTTATCAAAGCTCTaGCTGCTTTACAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACELSKL*LLYRRR
Trigger: CCTCCTCCTGTAAAGCAGGCAGAGCTTTGATAACTC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGAGTTATCAAAGCTCTaGCTGCTTTACAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARELSKL*LLYRRR
Trigger: CCTCCTCCTGTAAAGCAGGCAGAGCTTTGATAACTC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCACAATTCGCATCCTTaGACGTTCTTCCTAGATGTG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSHNSHP*TFFLDV
Trigger: CACATCTAGGAAGAACGTGCAAGGATGCGAATTGTG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCACATATTCCACAGTTaGGTCCAGAAGATGTGGATC +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSHIFHS*VQKMWI
Trigger: GATCCACATCTTCTGGACCCAACTGTGGAATATGTG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCCACTGCAATGCCGATaGCCATTGTGTTGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARPLQCR*PLCCVF
Trigger: AAAGACACAACACAATGGCCATCGGCATTGCAGTGG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTCAAAAGTCACAGCCTaGCGCTCCATTAACGTCACA +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACSKVTA*RSINVT
Trigger: TGTGACGTTAATGGAGCGCCAGGCTGTGACTTTTGA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCAAAAGTCACAGCCTaGCGCTCCATTAACGTCACA +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARSKVTA*RSINVT
Trigger: TGTGACGTTAATGGAGCGCCAGGCTGTGACTTTTGA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCGCGCTGTTGCCAAATaGTTCAGCATGATTTCACAG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARRAVAK*FSMISQ
Trigger: CTGTGAAATCATGCTGAACCATTTGGCAACAGCGCG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCGCGCTGTTGCCAAATaGTTCAGCATGATTTCACAG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACRAVAK*FSMISQ
Trigger: CTGTGAAATCATGCTGAACCATTTGGCAACAGCGCG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTCTTTTCTAACCTTGTaGTCTGTGGCATTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACSFLTL*SVAFPG
Trigger: CCCTGGAAATGCCACAGATCACAAGGTTAGAAAAGA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTTTCTAACCTTGTaGTCTGTGGCATTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARSFLTL*SVAFPG
Trigger: CCCTGGAAATGCCACAGATCACAAGGTTAGAAAAGA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTATTTCTTCATCTGGTTaGAAACCTGCCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACISSSG*KPARIL
Trigger: GAGGATCCTGGCAGGTTTTCAACCAGATGAAGAAAT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATTTCTTCATCTGGTTaGAAACCTGCCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARISSSG*KPARIL
Trigger: GAGGATCCTGGCAGGTTTTCAACCAGATGAAGAAAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGTTTCTGGGAAGGCTTaGAAATTTTCCTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARVSGKA*KFSCSH
Trigger: ATGGCTGCAGGAAAATTTGCAAGCCTTCCCAGAAAC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGTTTCTGGGAAGGCTTaGAAATTTTCCTGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACVSGKA*KFSCSH
Trigger: ATGGCTGCAGGAAAATTTGCAAGCCTTCCCAGAAAC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTGCACGTTTCAACATTaGTGTTTCCAGGGGCTTATT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSCTFQH*CFQGLI
Trigger: AATAAGCCCCTGGAAACAGCAATGTTGAAACGTGCA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCATGAATCGCGCTGTTaGCAAATGGTTCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACHESRC*QMVQHD
Trigger: ATCATGCTGAACCATTTGGCAACAGCGCGATTCATG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCATGAATCGCGCTGTTaGCAAATGGTTCAGCATGAT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARHESRC*QMVQHD
Trigger: ATCATGCTGAACCATTTGGCAACAGCGCGATTCATG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATCTGGTTGAAAACCTaGCAGGATCCTCTCAGCATT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARIWLKT*QDPLSI
Trigger: AATGCTGAGAGGATCCTGGCAGGTTTTCAACCAGAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTATCTGGTTGAAAACCTaGCAGGATCCTCTCAGCATT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACIWLKT*QDPLSI
Trigger: AATGCTGAGAGGATCCTGGCAGGTTTTCAACCAGAT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTCACCGGCATGTTTCTaGGAAGGCTTGCAAATTTTC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACSPACF*EGLQIF
Trigger: GAAAATTTGCAAGCCTTCCCAGAAACATGCCGGTGA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCACATATTCCACAGTTaGGTCCAGAAGATGTGGATC +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACHIFHS*VQKMWI
Trigger: GATCCACATCTTCTGGACCCAACTGTGGAATATGTG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGTTTCTCATAGAGAATaGCAGTTTGGGTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSVSHRE*QFGCTG
Trigger: ACCAGTACACCCAAACTGCCATTCTCTATGAGAAAC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTCATATCTCTCTGTCTaGTTGACTTGTGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACSYLSV*LTCAPL
Trigger: CAAAGGTGCACAAGTCAATCAGACAGAGAGATATGA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTGCACGTTTCAACATTaGTGTTTCCAGGGGCTTATT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARCTFQH*CFQGLI
Trigger: AATAAGCCCCTGGAAACAGCAATGTTGAAACGTGCA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTGCACGTTTCAACATTaGTGTTTCCAGGGGCTTATT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACCTFQH*CFQGLI
Trigger: AATAAGCCCCTGGAAACAGCAATGTTGAAACGTGCA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGGTGAACAGTTCTTTTaGACGTTTCAACATTGCTGT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSGEQFF*TFQHCC
Trigger: ACAGCAATGTTGAAACGTGCAAAAGAACTGTTCACC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGTTTCTCATAGAGAATaGCAGTTTGGGTGTACTGGT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARVSHRE*QFGCTG
Trigger: ACCAGTACACCCAAACTGCCATTCTCTATGAGAAAC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCATAGCAATCGCATTTaGAATTCAGTCTTGCAGATT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSHSNRI*NSVLQI
Trigger: AATCTGCAAGACTGAATTTCAAATGCGATTGCTATG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGGTGAACAGTTCTTTTaGACGTTTCAACATTGCTGT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACGEQFF*TFQHCC
Trigger: ACAGCAATGTTGAAACGTGCAAAAGAACTGTTCACC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR GCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGGTGAACAGTTCTTTTaGACGTTTCAACATTGCTGT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARGEQFF*TFQHCC
Trigger: ACAGCAATGTTGAAACGTGCAAAAGAACTGTTCACC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTATTCATTTCTTCATCTaGTTGAAAACCTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSIHFFI*LKTCQD
Trigger: ATCCTGGCAGGTTTTCAACCAGATGAAGAAATGAAT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTATTCTAAAGGTTCTCTaGAGAGTTATCAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: MVKYHDNRKQPANIARSSILKVL*RVIKAL
Trigger: CAGAGCTTTGATAACTCTCCAGAGAACCTTTAGAAT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCATAGCAATCGCATTTaGAATTCAGTCTTGCAGATT +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACHSNRI*NSVLQI
Trigger: AATCTGCAAGACTGAATTTCAAATGCGATTGCTATG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR TCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCATAGCAATCGCATTTaGAATTCAGTCTTGCAGATT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARHSNRI*NSVLQI
Trigger: AATCTGCAAGACTGAATTTCAAATGCGATTGCTATG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATTCATTTCTTCATCTaGTTGAAAACCTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARIHFFI*LKTCQD
Trigger: ATCCTGGCAGGTTTTCAACCAGATGAAGAAATGAAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTATTCTAAAGGTTCTCTaGAGAGTTATCAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SVLCAIYTFNILWILKACILKVL*RVIKAL
Trigger: CAGAGCTTTGATAACTCTCCAGAGAACCTTTAGAAT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CCA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATTCTAAAGGTTCTCTaGAGAGTTATCAAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TKMVKYHDNRKQPANIARILKVL*RVIKAL
Trigger: CAGAGCTTTGATAACTCTCCAGAGAACCTTTAGAAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS CCA 90 bp CGCGGCGCTGGGCGCTCGGGCTCTCAGGATCTCTGGACCTCCGGCTaGGGCTCAAAGGCGCCGCGCGGCCGGCCTCGCACCGCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: RGAGRSGSQDLWTSG*GSKAPRGRPRTARA
Trigger: GGCGCGGGCGGTGCGAGGCCGGCCGCGCGGCGCCTTTGAGCCCCAGCCGGAGGTCCAGAGATCCTGAGAGCCCGAGCGCCCAGCGCCGCG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260502.11
CDS TCA 90 bp ATGCCGCTCGAGTGCCACCGAGCAAGATGCCTGGCCGCCAATCGCTaGGCGCTCCCCGCCGTGGGCCACGTCTCGGGGAGTCCCAGCGCG +
Preference number: 5 (lower is better)
Translates to: MPLECHRARCLAANR*ALPAVGHVSGSPSA
Trigger: CGCGCTGGGACTCCCCGAGACGTGGCCCACGGCGGGGAGCGCTCAGCGATTGGCGGCCAGGCATCTTGCTCGGTGGCACTCGAGCGGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS GCA 90 bp AGCTCCGACGGGCAGGGGGTCGGGCGAGGCCAGCGCCCGGGAAGATaGCGCTCGAGTGCCACCGAGCAAGATGCCTGGCCGCCAATCGCT +
Preference number: 5 (lower is better)
Translates to: SSDGQGVGRGQRPGR*RSSATEQDAWPPIA
Trigger: AGCGATTGGCGGCCAGGCATCTTGCTCGGTGGCACTCGAGCGGCATCTTCCCGGGCGCTGGCCTCGCCCGACCCCCTGCCCGTCGGAGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS GCA 90 bp CTCGGAGCCTTGGGCTTCCACCAGAGCGCTCTGGGCCCTCGCATCTaGCCGACCCCGGCCGGCTTCTGCGAAGAGGGGACGGGCGGGACA +
Preference number: 5 (lower is better)
Translates to: LGALGFHQSALGPRI*PTPAGFCEEGTGGT
Trigger: TGTCCCGCCCGTCCCCTCTTCGCAGAAGCCGGCCGGGGTCGGGCAGATGCGAGGGCCCAGAGCGCTCTGGTGGAAGCCCAAGGCTCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS CCA 90 bp CAGCGCCCGGGAAGATGCCGCTCGAGTGCCACCGAGCAAGATGCCTaGCCGCCAATCGCTGAGCGCTCCCCGCCGTGGGCCACGTCTCGG +
Preference number: 5 (lower is better)
Translates to: QRPGRCRSSATEQDA*PPIAERSPPWATSR
Trigger: CCGAGACGTGGCCCACGGCGGGGAGCGCTCAGCGATTGGCGGCCAGGCATCTTGCTCGGTGGCACTCGAGCGGCATCTTCCCGGGCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS CCA 90 bp CACATCCGGCCTTCCCTTGGTGAGGCTGCCCTCCCGGGCCTGGCCTaGGGAGGTGCCATAATGCTCCTCCAGGCACCGCAGAGGCACCGT +
Preference number: 5 (lower is better)
Translates to: HIRPSLGEAALPGLA*GGAIMLLQAPQRHR
Trigger: ACGGTGCCTCTGCGGTGCCTGGAGGAGCATTATGGCACCTCCCCAGGCCAGGCCCGGGAGGGCAGCCTCACCAAGGGAAGGCCGGATGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS CCA 90 bp GAGAAACTCGCCTCCTCGGAGCCTTGGGCTTCCACCAGAGCGCTCTaGGCCCTCGCATCTGCCCGACCCCGGCCGGCTTCTGCGAAGAGG +
Preference number: 5 (lower is better)
Translates to: EKLASSEPWASTRAL*ALASARPRPASAKR
Trigger: CCTCTTCGCAGAAGCCGGCCGGGGTCGGGCAGATGCGAGGGCCCAGAGCGCTCTGGTGGAAGCCCAAGGCTCCGAGGAGGCGAGTTTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS TCA 90 bp CCCTCCGAACCACTGCTGGGCTCAGGGCAGGCTCGCTTCCCGTCCTaGACACAGGTGAGTTTGGGCAGGGGCTTGTGTCCACACCCGAGG +
Preference number: 5 (lower is better)
Translates to: PSEPLLGSGQARFPS*TQVSLGRGLCPHPR
Trigger: CCTCGGGTGTGGACACAAGCCCCTGCCCAAACTCACCTGTGTTCAGGACGGGAAGCGAGCCTGCCCTGAGCCCAGCAGTGGTTCGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS CCA 90 bp GTTTCGCCGTGCCGGTCCTGCCATGGGCTCTCCTGGATGCCATCCTaGGTCACAGGCGAGTTCTGCCGTGGGGATTTGGAGTGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: VSPCRSCHGLSWMPS*VTGEFCRGDLEWGR
Trigger: CCTCCCCCACTCCAAATCCCCACGGCAGAACTCGCCTGTGACCCAGGATGGCATCCAGGAGAGCCCATGGCAGGACCGGCACGGCGAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS CCA 90 bp AGATGGGCCGGCGGTTGCCCACGTAGCAGCGCACCAGGCCGGGGATaGAGTCGAAGCTCTCCATCTCGAACTGGTACTGCACGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: RWAGGCPRSSAPGRG*SRSSPSRTGTARGC
Trigger: ACAGCCGCGTGCAGTACCAGTTCGAGATGGAGAGCTTCGACTCCATCCCCGGCCTGGTGCGCTGCTACGTGGGCAACCGCCGGCCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000490377.1
CDS TCA 90 bp CACTGCTGGGCTCAGGGCAGGCTCGCTTCCCGTCCTGAACACAGGTaGGTTTGGGCAGGGGCTTGTGTCCACACCCGAGGACTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: HCWAQGRLASRPEHR*VWAGACVHTRGLRW
Trigger: CCACCTCAGTCCTCGGGTGTGGACACAAGCCCCTGCCCAAACTCACCTGTGTTCAGGACGGGAAGCGAGCCTGCCCTGAGCCCAGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS CCA 90 bp GCAGCCATAATTCTCAACTCGGAGAAACTCGCCTCCTCGGAGCCTTaGGCTTCCACCAGAGCGCTCTGGGCCCTCGCATCTGCCCGACCC +
Preference number: 5 (lower is better)
Translates to: AAIILNSEKLASSEP*ASTRALWALASARP
Trigger: GGGTCGGGCAGATGCGAGGGCCCAGAGCGCTCTGGTGGAAGCCCAAGGCTCCGAGGAGGCGAGTTTCTCCGAGTTGAGAATTATGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS TCA 90 bp GGGCCATTTCTCAGCGTTGTGTTTGCAGCGAGCAATCTTGAGGGATaGGGTAATGTCTCCAGACGTCGCGCGGCGGCGCTCGCGCGCAGG +
Preference number: 5 (lower is better)
Translates to: GPFLSVVFAASNLEG*GNVSRRRAAALARR
Trigger: CCTGCGCGCGAGCGCCGCCGCGCGACGTCTGGAGACATTACCTCATCCCTCAAGATTGCTCGCTGCAAACACAACGCTGAGAAATGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649852.1
CDS CCA 90 bp CTGAAGGTGAAGGTTTCGCCGTGCCGGTCCTGCCATGGGCTCTCCTaGATGCCATCCTGGGTCACAGGCGAGTTCTGCCGTGGGGATTTG +
Preference number: 5 (lower is better)
Translates to: LKVKVSPCRSCHGLS*MPSWVTGEFCRGDL
Trigger: CAAATCCCCACGGCAGAACTCGCCTGTGACCCAGGATGGCATCCAGGAGAGCCCATGGCAGGACCGGCACGGCGAAACCTTCACCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS CCA 90 bp GGCGCCTCATTCTGCTTGGCTGTGAGCAGTTCTGTGTGGCTTCCCTaGGCACATGAGGGTAGCTTTGCTCCCCTGCCGCAGCCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: GASFCLAVSSSVWLP*AHEGSFAPLPQPVA
Trigger: TGCCACAGGCTGCGGCAGGGGAGCAAAGCTACCCTCATGTGCCCAGGGAAGCCACACAGAACTGCTCACAGCCAAGCAGAATGAGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS TCA 90 bp GGGCCATTTCTCAGCGTTGTGTTTGCAGCGAGCAATCTTGAGGGATaGGGTAATGTCTCCGTCTCGCAGCCCGAGGGGAGGCCGCTCGGC +
Preference number: 5 (lower is better)
Translates to: GPFLSVVFAASNLEG*GNVSVSQPEGRPLG
Trigger: GCCGAGCGGCCTCCCCTCGGGCTGCGAGACGGAGACATTACCTCATCCCTCAAGATTGCTCGCTGCAAACACAACGCTGAGAAATGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS CCA 90 bp TGGGCTCTCCTGGATGCCATCCTGGGTCACAGGCGAGTTCTGCCGTaGGGATTTGGAGTGGGGGAGGGTGCCCATGTGACTGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: WALLDAILGHRRVLP*GFGVGEGAHVTEVI
Trigger: GATGACTTCAGTCACATGGGCACCCTCCCCCACTCCAAATCCCCACGGCAGAACTCGCCTGTGACCCAGGATGGCATCCAGGAGAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS CCA 90 bp TTGTTTCTGAGGAGGTTTCCCCTGGGCAAATTCTGCTCTCGGGCCTaGACGCCACCCATGGTGAGGCTCAGCCTCTTGGCCACATCCGGC +
Preference number: 5 (lower is better)
Translates to: LFLRRFPLGKFCSRA*TPPMVRLSLLATSG
Trigger: GCCGGATGTGGCCAAGAGGCTGAGCCTCACCATGGGTGGCGTCCAGGCCCGAGAGCAGAATTTGCCCAGGGGAAACCTCCTCAGAAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS TCA 90 bp GCAGCTTGCAGCCAATCGGCAGGTAGCTCTCTGACTGGTGGGCTTTaGGGGACAAGGCTCTTCTGTCCTGCATGTGATCCAGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: AACSQSAGSSLTGGL*GTRLFCPACDPGRR
Trigger: CCGCCTGCCTGGATCACATGCAGGACAGAAGAGCCTTGTCCCTCAAAGCCCACCAGTCAGAGAGCTACCTGCCGATTGGCTGCAAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS GCA 90 bp AGAAGATGTGGATCCCTGAAGGTGAAGGTTTCGCCGTGCCGGTCCTaGCATGGGCTCTCCTGGATGCCATCCTGGGTCACAGGCGAGTTC +
Preference number: 5 (lower is better)
Translates to: RRCGSLKVKVSPCRS*HGLSWMPSWVTGEF
Trigger: GAACTCGCCTGTGACCCAGGATGGCATCCAGGAGAGCCCATGGCAGGACCGGCACGGCGAAACCTTCACCTTCAGGGATCCACATCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS TCA 90 bp GCAGCCTGTGGCAAACGCTGGGTTCAGTTCACAGTAGTTGGCCTCTaGGTTGAGCCAGGCAGAGGGAGACGAGGGAACCTTGAGGAACGG +
Preference number: 5 (lower is better)
Translates to: AACGKRWVQFTVVGL*VEPGRGRRGNLEER
Trigger: CCGTTCCTCAAGGTTCCCTCGTCTCCCTCTGCCTGGCTCAACTCAGAGGCCAACTACTGTGAACTGAACCCAGCGTTTGCCACAGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS GCA 90 bp GTTCTGTGTGGCTTCCCTGGGCACATGAGGGTAGCTTTGCTCCCCTaGCGCAGCCTGTGGCAAACGCTGGGTTCAGTTCACAGTAGTTGG +
Preference number: 5 (lower is better)
Translates to: VLCGFPGHMRVALLP*RSLWQTLGSVHSSW
Trigger: CCAACTACTGTGAACTGAACCCAGCGTTTGCCACAGGCTGCGGCAGGGGAGCAAAGCTACCCTCATGTGCCCAGGGAAGCCACACAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS GCA 90 bp GAAAGGCCATCTGGGCGTGGACACCCAGCATTCAAAGGAGCGATGTaGTGGAATGGTCTGGCTGCTCCCTCCACACCACGATGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ERPSGRGHPAFKGAM*WNGLAAPSTPRWKL
Trigger: CAGCTTCCATCGTGGTGTGGAGGGAGCAGCCAGACCATTCCAGCACATCGCTCCTTTGAATGCTGGGTGTCCACGCCCAGATGGCCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS CCA 90 bp AGGCCATCTGGGCGTGGACACCCAGCATTCAAAGGAGCGATGTGCTaGAATGGTCTGGCTGCTCCCTCCACACCACGATGGAAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: RPSGRGHPAFKGAMC*NGLAAPSTPRWKLL
Trigger: AAGCAGCTTCCATCGTGGTGTGGAGGGAGCAGCCAGACCATTCCAGCACATCGCTCCTTTGAATGCTGGGTGTCCACGCCCAGATGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS TCA 90 bp AGGGGCGTCACAAACTCGCCCTTGTCCCACTGCCCCTTCTCCATCTaGGCTGCCGCAGGTTCCCAAGGTCTTTCCCTGTCATCATCATCA +
Preference number: 5 (lower is better)
Translates to: RGVTNSPLSHCPFSI*AAAGSQGLSLSSSS
Trigger: TGATGATGATGACAGGGAAAGACCTTGGGAACCTGCGGCAGCTCAGATGGAGAAGGGGCAGTGGGACAAGGGCGAGTTTGTGACGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS TCA 90 bp CAGGCGCAGCTGGTGTCCGTGAGGCAAGGTAATGAGTTCCAGGCCTaGGCTCACCCCCATGTTCCTCCTCATCTCTTCAGAGACTCCAAG +
Preference number: 5 (lower is better)
Translates to: QAQLVSVRQGNEFQA*AHPHVPPHLFRDSK
Trigger: CTTGGAGTCTCTGAAGAGATGAGGAGGAACATGGGGGTGAGCTCAGGCCTGGAACTCATTACCTTGCCTCACGGACACCAGCTGCGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS TCA 90 bp AATAGAGGTCCCCCATGGAATCCTTCAGTTCCACCGCCACCTGGATaGTCTTACTCAGAGTGGCCGCTCGGTCCTCCAAAGTGCCCGTGC +
Preference number: 5 (lower is better)
Translates to: NRGPPWNPSVPPPPG*SYSEWPLGPPKCPC
Trigger: GCACGGGCACTTTGGAGGACCGAGCGGCCACTCTGAGTAAGATCATCCAGGTGGCGGTGGAACTGAAGGATTCCATGGGGGACCTCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS TCA 90 bp ACACACATGCACCCTTCTGCACACCTACAGCAGGCACTGGCTCTGTaGCTAAGATGCTCCTCCCAGGGAGTCACCTTTGGCAGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: THMHPSAHLQQALAL*LRCSSQGVTFGRCL
Trigger: CAGGCACCTGCCAAAGGTGACTCCCTGGGAGGAGCATCTTAGTCACAGAGCCAGTGCCTGCTGTAGGTGTGCAGAAGGGTGCATGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS TCA 90 bp GCCTCAGCTCTGTGGACGTGCAGCTTCCCCTGCACATTGCATCTCTaGATGAAGGCTTCCTCTGGAGGCCTGCATGGTGACAGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: ASALWTCSFPCTLHL*MKASSGGLHGDRLA
Trigger: TGCAAGCCTGTCACCATGCAGGCCTCCAGAGGAAGCCTTCATTCAGAGATGCAATGTGCAGGGGAAGCTGCACGTCCACAGAGCTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS GCA 90 bp CATCTTGATAGGCATCTGGGCGATGCTCAGCGAGAGGGGACCTGCTaGTCAGAAGGTCCATGGATGAGGCCAGGGGGAACTGGTGATTCA +
Preference number: 5 (lower is better)
Translates to: HLDRHLGDAQREGTC*SEGPWMRPGGTGDS
Trigger: TGAATCACCAGTTCCCCCTGGCCTCATCCATGGACCTTCTGAGCAGCAGGTCCCCTCTCGCTGAGCATCGCCCAGATGCCTATCAAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS GCA 90 bp ACACATCTTGATAGGCATCTGGGCGATGCTCAGCGAGAGGGGACCTaGTGCTCAGAAGGTCCATGGATGAGGCCAGGGGGAACTGGTGAT +
Preference number: 5 (lower is better)
Translates to: THLDRHLGDAQREGT*CSEGPWMRPGGTGD
Trigger: ATCACCAGTTCCCCCTGGCCTCATCCATGGACCTTCTGAGCAGCAGGTCCCCTCTCGCTGAGCATCGCCCAGATGCCTATCAAGATGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS GCA 90 bp GGCCAGGGGGAACTGGTGATTCACCGGCATGTTTCTGGGAAGGCTTaGAAATTTTCCTGCAGCCATAATTCTCAACTCTCCCGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: GQGELVIHRHVSGKA*KFSCSHNSQLSRRG
Trigger: GCCGCGCCGGGAGAGTTGAGAATTATGGCTGCAGGAAAATTTGCAAGCCTTCCCAGAAACATGCCGGTGAATCACCAGTTCCCCCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260502.11
CDS CCA 90 bp ATCTGGGCGTGGACACCCAGCATTCAAAGGAGCGATGTGCTGGAATaGTCTGGCTGCTCCCTCCACACCACGATGGAAGCTGCTTTTGCT +
Preference number: 5 (lower is better)
Translates to: IWAWTPSIQRSDVLE*SGCSLHTTMEAAFA
Trigger: AGCAAAAGCAGCTTCCATCGTGGTGTGGAGGGAGCAGCCAGACCATTCCAGCACATCGCTCCTTTGAATGCTGGGTGTCCACGCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS GCA 90 bp CGTCACAAACTCGCCCTTGTCCCACTGCCCCTTCTCCATCTGAGCTaGCGCAGGTTCCCAAGGTCTTTCCCTGTCATCATCATCAAGGAT +
Preference number: 5 (lower is better)
Translates to: RHKLALVPLPLLHLS*RRFPRSFPVIIIKD
Trigger: ATCCTTGATGATGATGACAGGGAAAGACCTTGGGAACCTGCGGCAGCTCAGATGGAGAAGGGGCAGTGGGACAAGGGCGAGTTTGTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS GCA 90 bp TCCCTCCACACCACGATGGAAGCTGCTTTTGCTGATGACTGTAGCTaGGCACTGTGCCCCTCTCAACCTTCAGCATCCTCCATTGACTCC +
Preference number: 5 (lower is better)
Translates to: SLHTTMEAAFADDCS*ALCPSQPSASSIDS
Trigger: GGAGTCAATGGAGGATGCTGAAGGTTGAGAGGGGCACAGTGCGCAGCTACAGTCATCAGCAAAAGCAGCTTCCATCGTGGTGTGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS CCA 90 bp CTTCCGTGGAAGGGTGCCATGTATAGACACATCTTGATAGGCATCTaGGCGATGCTCAGCGAGAGGGGACCTGCTGCTCAGAAGGTCCAT +
Preference number: 5 (lower is better)
Translates to: LPWKGAMYRHILIGI*AMLSERGPAAQKVH
Trigger: ATGGACCTTCTGAGCAGCAGGTCCCCTCTCGCTGAGCATCGCCCAGATGCCTATCAAGATGTGTCTATACATGGCACCCTTCCACGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS CCA 90 bp GCTCCTCCCAGGGAGTCACCTTTGGCAGGTGCCTGGACTGTGACATaGGCCACTGAACTGCTCATCATTCGTCTTTCAAAGCCAAGGACT +
Preference number: 5 (lower is better)
Translates to: APPRESPLAGAWTVT*ATELLIIRLSKPRT
Trigger: AGTCCTTGGCTTTGAAAGACGAATGATGAGCAGTTCAGTGGCCCATGTCACAGTCCAGGCACCTGCCAAAGGTGACTCCCTGGGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS TCA 90 bp GACCTGCTGCTCAGAAGGTCCATGGATGAGGCCAGGGGGAACTGGTaGTTCACCGGCATGTTTCTGGGAAGGCTTGCAAATTTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: DLLLRRSMDEARGNW*FTGMFLGRLANFPA
Trigger: TGCAGGAAAATTTGCAAGCCTTCCCAGAAACATGCCGGTGAATCACCAGTTCCCCCTGGCCTCATCCATGGACCTTCTGAGCAGCAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS TCA 90 bp TCTGACTGGTGGGCTTTGAGGGACAAGGCTCTTCTGTCCTGCATGTaGTCCAGGCAGGCGGGCTGGCTACCACTCTTTTCTTTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: SDWWALRDKALLSCM*SRQAGWLPLFSLFL
Trigger: CAGAAACAAAGAAAAGAGTGGTAGCCAGCCCGCCTGCCTGGATCACATGCAGGACAGAAGAGCCTTGTCCCTCAAAGCCCACCAGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS GCA 90 bp GGCCGCTCGGTCCTCCAAAGTGCCCGTGCATCCCAGAATGTCCACTaGAATGCCGATGGCCATTGTGTTGTGTCTTTCAATTATGTCCAG +
Preference number: 5 (lower is better)
Translates to: GRSVLQSARASQNVH*NADGHCVVSFNYVQ
Trigger: CTGGACATAATTGAAAGACACAACACAATGGCCATCGGCATTGCAGTGGACATTCTGGGATGCACGGGCACTTTGGAGGACCGAGCGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS GCA 90 bp TGGACACCCAGCATTCAAAGGAGCGATGTGCTGGAATGGTCTGGCTaGTCCCTCCACACCACGATGGAAGCTGCTTTTGCTGATGACTGT +
Preference number: 5 (lower is better)
Translates to: WTPSIQRSDVLEWSG*SLHTTMEAAFADDC
Trigger: ACAGTCATCAGCAAAAGCAGCTTCCATCGTGGTGTGGAGGGAGCAGCCAGACCATTCCAGCACATCGCTCCTTTGAATGCTGGGTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS CCA 90 bp GAGCGAGGTTCTTCCACTGACAGGTCAGGACAAAGTTCCCAGGGCTaGACAGAGAGTCACGAACTAGGAAGTCACCATCTCGCTGCACAA +
Preference number: 5 (lower is better)
Translates to: ERGSSTDRSGQSSQG*TESHELGSHHLAAQ
Trigger: TTGTGCAGCGAGATGGTGACTTCCTAGTTCGTGACTCTCTGTCCAGCCCTGGGAACTTTGTCCTGACCTGTCAGTGGAAGAACCTCGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000490377.1
CDS CCA 90 bp ATCATCATCAAGGATCAAGTAGTTGACGCCAGAGTTCCGGGGACCTaGCGCCTCATTCTGCTTGGCTGTGAGCAGTTCTGTGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: IIIKDQVVDARVPGT*RLILLGCEQFCVAS
Trigger: GGAAGCCACACAGAACTGCTCACAGCCAAGCAGAATGAGGCGCCAGGTCCCCGGAACTCTGGCGTCAACTACTTGATCCTTGATGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS TCA 90 bp AAGATGCTCCTCCCAGGGAGTCACCTTTGGCAGGTGCCTGGACTGTaGCATGGGCCACTGAACTGCTCATCATTCGTCTTTCAAAGCCAA +
Preference number: 5 (lower is better)
Translates to: KMLLPGSHLWQVPGL*HGPLNCSSFVFQSQ
Trigger: TTGGCTTTGAAAGACGAATGATGAGCAGTTCAGTGGCCCATGTCACAGTCCAGGCACCTGCCAAAGGTGACTCCCTGGGAGGAGCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS TCA 90 bp TCTGACTGGTGGGCTTTGAGGGACAAGGCTCTTCTGTCCTGCATGTaGTCCAGGCAGGCGGGCTGGCTACCACTCTTTTCTTTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: SDWWALRDKALLSCM*SRQAGWLPLFSLFL
Trigger: AAGAAACAAAGAAAAGAGTGGTAGCCAGCCCGCCTGCCTGGATCACATGCAGGACAGAAGAGCCTTGTCCCTCAAAGCCCACCAGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466632.1
ENST00000539242.5
CDS GCA 90 bp CTCGGTCCTCCAAAGTGCCCGTGCATCCCAGAATGTCCACTGCAATaGCGATGGCCATTGTGTTGTGTCTTTCAATTATGTCCAGGCGCA +
Preference number: 5 (lower is better)
Translates to: LGPPKCPCIPECPLQ*RWPLCCVFQLCPGA
Trigger: TGCGCCTGGACATAATTGAAAGACACAACACAATGGCCATCGGCATTGCAGTGGACATTCTGGGATGCACGGGCACTTTGGAGGACCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS GCA 90 bp TTGAAAACCTGCCAGGATCCTCTCAGCATTCATCCGGTAGCTGTCTaGAGCCTCGGCCATGAATCGCGCTGTTGCCAAATGGTTCAGCAT +
Preference number: 5 (lower is better)
Translates to: LKTCQDPLSIHPVAV*SLGHESRCCQMVQH
Trigger: ATGCTGAACCATTTGGCAACAGCGCGATTCATGGCCGAGGCTGCAGACAGCTACCGGATGAATGCTGAGAGGATCCTGGCAGGTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000538653.1
ENST00000539242.5
CDS TCA 90 bp CAACATTGCTGTTTCCAGGGGCTTATTCTCAGGGGGAAGGAACTTTaGCTCAAACTCGTTGGGCCTGAAGGAGGAGACAGTCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: QHCCFQGLILRGKEL*LKLVGPEGGDSLQE
Trigger: CTCCTGGAGACTGTCTCCTCCTTCAGGCCCAACGAGTTTGAGTCAAAGTTCCTTCCCCCTGAGAATAAGCCCCTGGAAACAGCAATGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS TCA 90 bp ATTGTGTTGTGTCTTTCAATTATGTCCAGGCGCAGCTGGTGTCCGTaGGGCAAGGTAATGAGTTCCAGGCCTGAGCTCACCCCCATGTTC +
Preference number: 5 (lower is better)
Translates to: IVLCLSIMSRRSWCP*GKVMSSRPELTPMF
Trigger: GAACATGGGGGTGAGCTCAGGCCTGGAACTCATTACCTTGCCTCACGGACACCAGCTGCGCCTGGACATAATTGAAAGACACAACACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS TCA 90 bp CAGGGAGTCACCTTTGGCAGGTGCCTGGACTGTGACATGGGCCACTaGACTGCTCATCATTCGTCTTTCAAAGCCAAGGACTTTTCACTC +
Preference number: 5 (lower is better)
Translates to: QGVTFGRCLDCDMGH*TAHHSSFKAKDFSL
Trigger: GAGTGAAAAGTCCTTGGCTTTGAAAGACGAATGATGAGCAGTTCAGTGGCCCATGTCACAGTCCAGGCACCTGCCAAAGGTGACTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS TCA 90 bp ACTGGAGAATTTATAATGTGGTGCAGCCTGGCTGTTCCTGTAGCCTaGCCACCTGGGTTTGCATCCTGGCTCAGCTGTATGACTCTGGAC +
Preference number: 5 (lower is better)
Translates to: TGEFIMWCSLAVPVA*PPGFASWLSCMTLD
Trigger: GTCCAGAGTCATACAGCTGAGCCAGGATGCAAACCCAGGTGGTCAGGCTACAGGAACAGCCAGGCTGCACCACATTATAAATTCTCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490377.1
CDS GCA 90 bp GGCCAGGGGGAACTGGTGATTCACCGGCATGTTTCTGGGAAGGCTTaGAAATTTTCCTGCAGCCATAATTCTCAACTCGGAGAAACTCGC +
Preference number: 5 (lower is better)
Translates to: GQGELVIHRHVSGKA*KFSCSHNSQLGETR
Trigger: GCGAGTTTCTCCGAGTTGAGAATTATGGCTGCAGGAAAATTTGCAAGCCTTCCCAGAAACATGCCGGTGAATCACCAGTTCCCCCTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS CCA 90 bp ACTCCAAGTATCCTAGCAACCCTGCAGTCCATGCTCAGTACGTGCTaGGCGATGACCTTGGGGTCGTTGTTGGTGAACAGTTCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: TPSILATLQSMLSTC*AMTLGSLLVNSSFA
Trigger: TGCAAAAGAACTGTTCACCAACAACGACCCCAAGGTCATCGCCCAGCACGTACTGAGCATGGACTGCAGGGTTGCTAGGATACTTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS CCA 90 bp GTCCTCAGGCCCAGTCTTTTCCACCAGCTCCCTGGGAGAGTTGTTTaGAGAAGCGATTCACAATTCGCATCCTTGCACGTTCTTCCTAGA +
Preference number: 5 (lower is better)
Translates to: VLRPSLFHQLPGRVV*RSDSQFASLHVLPR
Trigger: TCTAGGAAGAACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAACTCTCCCAGGGAGCTGGTGGAAAAGACTGGGCCTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS TCA 90 bp CAACTCTTGCCTCTTCCTCCTTTCTCCAGGCCAGCTTGGGTCAGATaGAGCAGCTCTGTTTGGAGAAGCGATTCACAATTCGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: QLLPLPPFSRPAWVR*SSSVWRSDSQFASL
Trigger: CAAGGATGCGAATTGTGAATCGCTTCTCCAAACAGAGCTGCTTCATCTGACCCAAGCTGGCCTGGAGAAAGGAGGAAGAGGCAAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS TCA 90 bp GGAGCTCAACCCACTGACTGCCTGAGAGCCCAGAAGTGTCATTTCTaGCTATCTAAAGACCAGAGCATCTACTTGCTGCCATGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: GAQPTDCLRAQKCHF*LSKDQSIYLLPWLA
Trigger: AGCCAACCATGGCAGCAAGTAGATGCTCTGGTCTTTAGATAGTCAGAAATGACACTTCTGGGCTCTCAGGCAGTCAGTGGGTTGAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTACATCCGGCCTTCCCTaGGTGAGGCTGCCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSTSGLP*VRLPSR
Trigger: CCGGGAGGGCAGCCTCACCAAGGGAAGGCCGGATGT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCGCCTCCTCGGAGCCTaGGGCTTCCACCAGAGCGCT +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSRLLGA*GFHQSA
Trigger: AGCGCTCTGGTGGAAGCCCAAGGCTCCGAGGAGGCG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS TCA 90 bp TTGGGGGAACACATGTGGACTCTCTGCCTTCATGCAGGAGTTTGCTaGAGGGCTTCAGCTGTTTCTCATAGAGAATGGCAGTTTGGGTGT +
Preference number: 5 (lower is better)
Translates to: LGEHMWTLCLHAGVC*RASAVSHREWQFGC
Trigger: ACACCCAAACTGCCATTCTCTATGAGAAACAGCTGAAGCCCTTCAGCAAACTCCTGCATGAAGGCAGAGAGTCCACATGTGTTCCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000538653.1
ENST00000539242.5
CDS GCA 90 bp AGGCTGGATGAAATTCTGCCCTGTACTTGCAAACATTTGCAGAACTaGTCAGTCAGCCTTCCGGGAAAACCATGCCCACATCCTACTGGA +
Preference number: 5 (lower is better)
Translates to: RLDEILPCTCKHLQN*SVSLPGKPCPHPTG
Trigger: TCCAGTAGGATGTGGGCATGGTTTTCCCGGAAGGCTGACTGAGCAGTTCTGCAAATGTTTGCAAGTACAGGGCAGAATTTCATCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS CCA 90 bp GAACTGCTCAGTCAGCCTTCCGGGAAAACCATGCCCACATCCTACTaGATTCCTCTAGCTTTGGTGTTGTCAACACAGAGATCACTGAGA +
Preference number: 5 (lower is better)
Translates to: ELLSQPSGKTMPTSY*IPLALVLSTQRSLR
Trigger: TCTCAGTGATCTCTGTGTTGACAACACCAAAGCTAGAGGAATCCAGTAGGATGTGGGCATGGTTTTCCCGGAAGGCTGACTGAGCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGACATCCGGCCTTCCCTaGGTGAGGCTGCCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARTSGLP*VRLPSR
Trigger: CCGGGAGGGCAGCCTCACCAAGGGAAGGCCGGATGT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTACATCCGGCCTTCCCTaGGTGAGGCTGCCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACTSGLP*VRLPSR
Trigger: CCGGGAGGGCAGCCTCACCAAGGGAAGGCCGGATGT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTTGAGGAACGGCACCTaGCAGGGCTTAGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSLRNGT*QGLGGG
Trigger: GCCCCCGCCTAAGCCCTGCAAGGTGCCGTTCCTCAA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS GCA 90 bp TCTTGGCTCAAGGTTCTGAGGCTGGATGAAATTCTGCCCTGTACTTaGAAACATTTGCAGAACTGCTCAGTCAGCCTTCCGGGAAAACCA +
Preference number: 5 (lower is better)
Translates to: SWLKVLRLDEILPCT*KHLQNCSVSLPGKP
Trigger: TGGTTTTCCCGGAAGGCTGACTGAGCAGTTCTGCAAATGTTTGCAAGTACAGGGCAGAATTTCATCCAGCCTCAGAACCTTGAGCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS GCA 90 bp TCCCTGGGAGAGTTGTTTGGAGAAGCGATTCACAATTCGCATCCTTaGACGTTCTTCCTAGATGTGCCAAGAATGCAAGACCCTGATCAC +
Preference number: 5 (lower is better)
Translates to: SLGELFGEAIHNSHP*TFFLDVPRMQDPDH
Trigger: GTGATCAGGGTCTTGCATTCTTGGCACATCTAGGAAGAACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAACTCTCCCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS GCA 90 bp CCAGGGCTGGACAGAGAGTCACGAACTAGGAAGTCACCATCTCGCTaGACAAGGTTTTCAGACACAGCAACTGGAGAATTTATAATGTGG +
Preference number: 5 (lower is better)
Translates to: PGLDRESRTRKSPSR*TRFSDTATGEFIMW
Trigger: CCACATTATAAATTCTCCAGTTGCTGTGTCTGAAAACCTTGTGCAGCGAGATGGTGACTTCCTAGTTCGTGACTCTCTGTCCAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490377.1
CDS CCA 90 bp ACCAGAGCATCTACTTGCTGCCATGGTTGGCTGCTGGGCTGGTTTTaGGGTTCTTTTGCATTACGGGCTTATGGGTACTTTAATGTGACT +
Preference number: 5 (lower is better)
Translates to: TRASTCCHGWLLGWF*GSFALRAYGYFNVT
Trigger: AGTCACATTAAAGTACCCATAAGCCCGTAATGCAAAAGAACCCCAAAACCAGCCCAGCAGCCAACCATGGCAGCAAGTAGATGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS CCA 90 bp ATTTATAATGTGGTGCAGCCTGGCTGTTCCTGTAGCCTGACCACCTaGGTTTGCATCCTGGCTCAGCTGTATGACTCTGGACAAATTACA +
Preference number: 5 (lower is better)
Translates to: IYNVVQPGCSCSLTT*VCILAQLYDSGQIT
Trigger: TGTAATTTGTCCAGAGTCATACAGCTGAGCCAGGATGCAAACCCAGGTGGTCAGGCTACAGGAACAGCCAGGCTGCACCACATTATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490377.1
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGTGAGGCTCAGCCTCTaGGCCACATCCGGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACVRLSL*ATSGLP
Trigger: GGGAAGGCCGGATGTGGCCAAGAGGCTGAGCCTCAC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGTGAGGCTCAGCCTCTaGGCCACATCCGGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARVRLSL*ATSGLP
Trigger: GGGAAGGCCGGATGTGGCCAAGAGGCTGAGCCTCAC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTTGAGGAACGGCACCTaGCAGGGCTTAGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACLRNGT*QGLGGG
Trigger: GCCCCCGCCTAAGCCCTGCAAGGTGCCGTTCCTCAA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCACATGAGGGTAGCTTaGCTCCCCTGCCGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSHMRVA*LPCRSL
Trigger: CAGGCTGCGGCAGGGGAGCAAAGCTACCCTCATGTG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS GCA 90 bp GATGAAGCAGCTCTGTTTGGAGAAGCGATTCACAATTCGCATCCTTaGACGTTCTTCCTAGATGTGCCAAGAATGCAAGACCCTGATCAC +
Preference number: 5 (lower is better)
Translates to: DEAALFGEAIHNSHP*TFFLDVPRMQDPDH
Trigger: GTGATCAGGGTCTTGCATTCTTGGCACATCTAGGAAGAACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAGAGCTGCTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGGAGACGAGGGAACCTaGAGGAACGGCACCTTGCAG +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSGDEGT*RNGTLQ
Trigger: CTGCAAGGTGCCGTTCCTCAAGGTTCCCTCGTCTCC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCACATGAGGGTAGCTTaGCTCCCCTGCCGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARHMRVA*LPCRSL
Trigger: CAGGCTGCGGCAGGGGAGCAAAGCTACCCTCATGTG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCACATGAGGGTAGCTTaGCTCCCCTGCCGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACHMRVA*LPCRSL
Trigger: CAGGCTGCGGCAGGGGAGCAAAGCTACCCTCATGTG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGTCACAAACTCGCCCTaGTCCCACTGCCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSVTNSP*SHCPFS
Trigger: GGAGAAGGGGCAGTGGGACAAGGGCGAGTTTGTGAC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS CCA 90 bp CAAGGAAATGTGGCCAGTTTCATATTGTTGGATGGGATGTCTCGCTaGCTTAGAGAAGCCTATCTCTTGGTAGTGGAGACACATCAACCT +
Preference number: 5 (lower is better)
Translates to: QGNVASFILLDGMSR*LREAYLLVVETHQP
Trigger: AGGTTGATGTGTCTCCACTACCAAGAGATAGGCTTCTCTAAGCCAGCGAGACATCCCATCCAACAATATGAAACTGGCCACATTTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGAGTTTGGGCAGGGGCTaGTGTCCACACCCGAGGACT +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARSLGRG*CPHPRT
Trigger: AGTCCTCGGGTGTGGACACAAGCCCCTGCCCAAACT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTAGTTTGGGCAGGGGCTaGTGTCCACACCCGAGGACT +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACSLGRG*CPHPRT
Trigger: AGTCCTCGGGTGTGGACACAAGCCCCTGCCCAAACT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGGAGACGAGGGAACCTaGAGGAACGGCACCTTGCAG +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACGDEGT*RNGTLQ
Trigger: CTGCAAGGTGCCGTTCCTCAAGGTTCCCTCGTCTCC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGGAGACGAGGGAACCTaGAGGAACGGCACCTTGCAG +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARGDEGT*RNGTLQ
Trigger: CTGCAAGGTGCCGTTCCTCAAGGTTCCCTCGTCTCC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGGCGCCTCATTCTGCTaGGCTGTGAGCAGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSGASFC*AVSSSV
Trigger: CACAGAACTGCTCACAGCCAAGCAGAATGAGGCGCC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGTCACAAACTCGCCCTaGTCCCACTGCCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACVTNSP*SHCPFS
Trigger: GGAGAAGGGGCAGTGGGACAAGGGCGAGTTTGTGAC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGTCACAAACTCGCCCTaGTCCCACTGCCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARVTNSP*SHCPFS
Trigger: GGAGAAGGGGCAGTGGGACAAGGGCGAGTTTGTGAC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTGCTGGGCGATGACCTaGGGGTCGTTGTTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSCWAMT*GSLLVN
Trigger: GTTCACCAACAACGACCCCAAGGTCATCGCCCAGCA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS GCA 90 bp CTTGTAAACGCATTGTTTGGAGAAGCGATTCACAATTCGCATCCTTaGACGTTCTTCCTAGATGTGCCAAGAATGCAAGACCCTGATCAC +
Preference number: 5 (lower is better)
Translates to: LVNALFGEAIHNSHP*TFFLDVPRMQDPDH
Trigger: GTGATCAGGGTCTTGCATTCTTGGCACATCTAGGAAGAACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAATGCGTTTACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649852.1
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTAGAGGCACCGTCCTGTaGATGGGCTGGAAGATGATG +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSRGTVL*MGWKMM
Trigger: CATCATCTTCCAGCCCATCAACAGGACGGTGCCTCT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTCTGACTGGTGGGCTTaGAGGGACAAGGCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSDWWA*RDKALL
Trigger: CAGAAGAGCCTTGTCCCTCAAAGCCCACCAGTCAGA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGGCGCCTCATTCTGCTaGGCTGTGAGCAGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARGASFC*AVSSSV
Trigger: CACAGAACTGCTCACAGCCAAGCAGAATGAGGCGCC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGGCGCCTCATTCTGCTaGGCTGTGAGCAGTTCTGTG +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACGASFC*AVSSSV
Trigger: CACAGAACTGCTCACAGCCAAGCAGAATGAGGCGCC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCAGGGGGAAGGAACTTaGACTCAAACTCGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSQGEGT*TQTRWA
Trigger: GGCCCAACGAGTTTGAGTCAAAGTTCCTTCCCCCTG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTGCTGGGCGATGACCTaGGGGTCGTTGTTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARCWAMT*GSLLVN
Trigger: GTTCACCAACAACGACCCCAAGGTCATCGCCCAGCA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTGCTGGGCGATGACCTaGGGGTCGTTGTTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACCWAMT*GSLLVN
Trigger: GTTCACCAACAACGACCCCAAGGTCATCGCCCAGCA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTTTCTCCAGGCCAGCTaGGGTCAGATGAAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSFLQAS*GQMKQL
Trigger: GAGCTGCTTCATCTGACCCAAGCTGGCCTGGAGAAA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS TCA 90 bp ATGAAACTTTTGGCTTTGCTGATGCTGAGTCTTGGCTCAAGGTTCTaGGGCTGGATGAAATTCTGCCCTGTACTTGCAAACATTTGCAGA +
Preference number: 5 (lower is better)
Translates to: MKLLALLMLSLGSRF*GWMKFCPVLANICR
Trigger: TCTGCAAATGTTTGCAAGTACAGGGCAGAATTTCATCCAGCCTCAGAACCTTGAGCCAAGACTCAGCATCAGCAAAGCCAAAAGTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTAGAGGCACCGTCCTGTaGATGGGCTGGAAGATGATG +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACRGTVL*MGWKMM
Trigger: CATCATCTTCCAGCCCATCAACAGGACGGTGCCTCT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTGACTGGTGGGCTTaGAGGGACAAGGCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARSDWWA*RDKALL
Trigger: CAGAAGAGCCTTGTCCCTCAAAGCCCACCAGTCAGA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTCTGACTGGTGGGCTTaGAGGGACAAGGCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACSDWWA*RDKALL
Trigger: CAGAAGAGCCTTGTCCCTCAAAGCCCACCAGTCAGA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCAGGGGGAAGGAACTTaGACTCAAACTCGTTGGGCC +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARQGEGT*TQTRWA
Trigger: GGCCCAACGAGTTTGAGTCAAAGTTCCTTCCCCCTG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTATAGAGAATGGCAGTTaGGGTGTACTGGTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSIENGS*GVLVPQ
Trigger: CTGCGGCACCAGTACACCCAAACTGCCATTCTCTAT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTTTGACTCAAACTCGTaGGGCCTGAAGGAGGAGACA +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSFDSNS*GLKEET
Trigger: TGTCTCCTCCTTCAGGCCCAACGAGTTTGAGTCAAA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATAGAGAATGGCAGTTaGGGTGTACTGGTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARIENGS*GVLVPQ
Trigger: CTGCGGCACCAGTACACCCAAACTGCCATTCTCTAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCTCTGTCTGATTGACTaGTGCACCTTTGCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACLCLID*CTFAAP
Trigger: TGGGGCAGCAAAGGTGCACAAGTCAATCAGACAGAG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCTCTGTCTGATTGACTaGTGCACCTTTGCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARLCLID*CTFAAP
Trigger: TGGGGCAGCAAAGGTGCACAAGTCAATCAGACAGAG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTTTGACTCAAACTCGTaGGGCCTGAAGGAGGAGACA +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARFDSNS*GLKEET
Trigger: TGTCTCCTCCTTCAGGCCCAACGAGTTTGAGTCAAA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTTTGACTCAAACTCGTaGGGCCTGAAGGAGGAGACA +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACFDSNS*GLKEET
Trigger: TGTCTCCTCCTTCAGGCCCAACGAGTTTGAGTCAAA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTACCTTGGGGTCGTTGTaGGTGAACAGTTCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSTLGSL*VNSSFA
Trigger: TGCAAAAGAACTGTTCACCAACAACGACCCCAAGGT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTGGACTGATACATTGTTaGGGGGAACACATGTGGACT +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSGLIHC*GEHMWT
Trigger: AGTCCACATGTGTTCCCCCAAACAATGTATCAGTCC...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTAGTGGGACTGATACATaGTTTGGGGGAACACATGTG +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSSGTDT*FGGTHV
Trigger: CACATGTGTTCCCCCAAACAATGTATCAGTCCCACT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTTTGCAGCGAGCAATCTaGAGGGATGAGGTAATGTCT +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSLQRAI*RDEVMS
Trigger: AGACATTACCTCATCCCTCAAGATTGCTCGCTGCAA...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS CCA 90 bp TTTTTATTACTGCAGGCTTCACCTCTCTATTTGATATCTCACAGATaGCCCGTGATGAATCATGTGACGCACAGTGCTAAGTTAATCTCT +
Preference number: 5 (lower is better)
Translates to: FLLLQASPLYLISHR*PVMNHVTHSAKLIS
Trigger: AGAGATTAACTTAGCACTGTGCGTCACATGATTCATCACGGGCCATCTGTGAGATATCAAATAGAGAGGTGAAGCCTGCAGTAATAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433544.1
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTGTTTCTGGGAAGGCTaGCAAATTTTCCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACCFWEG*QIFLQP
Trigger: TGGCTGCAGGAAAATTTGCAAGCCTTCCCAGAAACA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTGTTTCTGGGAAGGCTaGCAAATTTTCCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARCFWEG*QIFLQP
Trigger: TGGCTGCAGGAAAATTTGCAAGCCTTCCCAGAAACA...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTATGTATAGACACATCTaGATAGGCATCTGGGCGATG +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSMYRHI*IGIWAM
Trigger: CATCGCCCAGATGCCTATCAAGATGTGTCTATACAT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCTACCACTCTTTTCTTaGTTTCTGAGGAGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSLPLFS*FLRRFP
Trigger: GGGAAACCTCCTCAGAAACAAAGAAAAGAGTGGTAG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTACCTTGGGGTCGTTGTaGGTGAACAGTTCTTTTGCA +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACTLGSL*VNSSFA
Trigger: TGCAAAAGAACTGTTCACCAACAACGACCCCAAGGT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTATGACCTTGGGGTCGTaGTTGGTGAACAGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSMTLGS*LVNSSF
Trigger: AAAAGAACTGTTCACCAACAACGACCCCAAGGTCAT...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCCGATGGCCATTGTGTaGTGTCTTTCAATTATGTCC +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSPMAIV*CLSIMS
Trigger: GGACATAATTGAAAGACACAACACAATGGCCATCGG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGGACTGATACATTGTTaGGGGGAACACATGTGGACT +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACGLIHC*GEHMWT
Trigger: AGTCCACATGTGTTCCCCCAAACAATGTATCAGTCC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGGACTGATACATTGTTaGGGGGAACACATGTGGACT +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARGLIHC*GEHMWT
Trigger: AGTCCACATGTGTTCCCCCAAACAATGTATCAGTCC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGAGTGGGACTGATACATaGTTTGGGGGAACACATGTG +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARSGTDT*FGGTHV
Trigger: CACATGTGTTCCCCCAAACAATGTATCAGTCCCACT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTAGTGGGACTGATACATaGTTTGGGGGAACACATGTG +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACSGTDT*FGGTHV
Trigger: CACATGTGTTCCCCCAAACAATGTATCAGTCCCACT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCATTTCTTCATCTGGTaGAAAACCTGCCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSHFFIW*KTCQDP
Trigger: AGGATCCTGGCAGGTTTTCAACCAGATGAAGAAATG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATGATGTGCCTCTCCTaGGAGAACTTGACTCCAATG +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARMMCLS*ENLTPM
Trigger: CATTGGAGTCAAGTTCTCCAAGGAGAGGCACATCAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370247.7
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATGTATAGACACATCTaGATAGGCATCTGGGCGATG +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARMYRHI*IGIWAM
Trigger: CATCGCCCAGATGCCTATCAAGATGTGTCTATACAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTCACATATTCCACAGTaGGGTCCAGAAGATGTGGAT +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACSHIPQ*GPEDVD
Trigger: ATCCACATCTTCTGGACCCAACTGTGGAATATGTGA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTATGATGTGCCTCTCCTaGGAGAACTTCACATATTCC +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACMMCLS*ENFTYS
Trigger: GGAATATGTGAAGTTCTCCAAGGAGAGGCACATCAT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCTACCACTCTTTTCTTaGTTTCTGAGGAGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACLPLFS*FLRRFP
Trigger: GGGAAACCTCCTCAGAAACAAAGAAAAGAGTGGTAG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCTACCACTCTTTTCTTaGTTTCTGAGGAGGTTTCCC +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARLPLFS*FLRRFP
Trigger: GGGAAACCTCCTCAGAAACAAAGAAAAGAGTGGTAG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGATGACCTTGGGGTCGTaGTTGGTGAACAGTTCTTTT +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARMTLGS*LVNSSF
Trigger: AAAAGAACTGTTCACCAACAACGACCCCAAGGTCAT...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCCGATGGCCATTGTGTaGTGTCTTTCAATTATGTCC +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACPMAIV*CLSIMS
Trigger: GGACATAATTGAAAGACACAACACAATGGCCATCGG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGTCTTCTCAATGCCGATGGCCATaGTGTTGTGTCTTTCAATTA +
Preference number: 5 (lower is better)
Translates to: MVKYHDNRKQPANIARSSQCRWP*CCVFQL
Trigger: TAATTGAAAGACACAACACAATGGCCATCGGCATTG...AGAAGACCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCATTTCTTCATCTGGTaGAAAACCTGCCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARHFFIW*KTCQDP
Trigger: AGGATCCTGGCAGGTTTTCAACCAGATGAAGAAATG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCATTTCTTCATCTGGTaGAAAACCTGCCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACHFFIW*KTCQDP
Trigger: AGGATCCTGGCAGGTTTTCAACCAGATGAAGAAATG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTTCACAATTCGCATCCTaGCACGTTCTTCCTAGATGT +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACSQFAS*HVLPRC
Trigger: ACATCTAGGAAGAACGTGCAAGGATGCGAATTGTGA...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCTCTCCTTGGAGAACTaGACTCCAATGAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARLSLEN*TPMKDL
Trigger: CAAGTCTTTCATTGGAGTCAAGTTCTCCAAGGAGAG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370247.7
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCAATGCCGATGGCCATaGTGTTGTGTCTTTCAATTA +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARQCRWP*CCVFQL
Trigger: TAATTGAAAGACACAACACAATGGCCATCGGCATTG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTCAATGCCGATGGCCATaGTGTTGTGTCTTTCAATTA +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACQCRWP*CCVFQL
Trigger: TAATTGAAAGACACAACACAATGGCCATCGGCATTG...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTATGAAGCAGCTCTGTTaGGAGAAGCGATTCACAATT +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACMKQLC*EKRFTI
Trigger: AATTGTGAATCGCTTCTCCAAACAGAGCTGCTTCAT...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS-3UTR CAA 90 bp AGTGTGCTCTGTGCAATTTACACGTTTAATATCCTGTGGATACTAAAAGCTTGTGGTCTTCTCTTAAATTaGCTGATCAACATTAGCAGT +
Preference number: 5 (lower is better)
Translates to: SVLCAIYTFNILWILKACGLLLN*LINISS
Trigger: ACTGCTAATGTTGATCAGCAAATTTAAGAGAAGACC...ACAAGCTTTTAGTATCCACAGGATATTAAACGTGTAAATTGCACAGAGCACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGGGTCTTCTCTTAAATTaGCTGATCAACATTAGCAGT +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARGLLLN*LINISS
Trigger: ACTGCTAATGTTGATCAGCAAATTTAAGAGAAGACC...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS-3UTR CAA 90 bp ACTAAAATGGTCAAATACCATGATAATAGAAAGCAACCAGCCAACATAGCTAGGCTACCACTCTTTTCTTaGTTTCTTTACAAGCACCAA +
Preference number: 5 (lower is better)
Translates to: TKMVKYHDNRKQPANIARLPLFS*FLYKHQ
Trigger: TTGGTGCTTGTAAAGAAACAAAGAAAAGAGTGGTAG...CCTAGCTATGTTGGCTGGTTGCTTTCTATTATCATGGTATTTGACCATTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539242.5
CDS GCA 72 bp GGGCAGGGGGTCGGGCGAGGCCAGCGCCCGGGAAGATaGCGCTCGAGTGCCACCGAGCAAGATGCCTGGCCG +
Preference number: 6 (lower is better)
Translates to: GQGVGRGQRPGR*RSSATEQDAWP
Trigger: CGGCCAGGCATCTTGCTCGGTGGCACTCGAGCGGCATCTTCCCGGGCGCTGGCCTCGCCCGACCCCCTGCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS TCA 72 bp GAGTGCCACCGAGCAAGATGCCTGGCCGCCAATCGCTaGGCGCTCCCCGCCGTGGGCCACGTCTCGGGGAGT +
Preference number: 6 (lower is better)
Translates to: ECHRARCLAANR*ALPAVGHVSGS
Trigger: ACTCCCCGAGACGTGGCCCACGGCGGGGAGCGCTCAGCGATTGGCGGCCAGGCATCTTGCTCGGTGGCACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS GCA 72 bp TTGGGCTTCCACCAGAGCGCTCTGGGCCCTCGCATCTaGCCGACCCCGGCCGGCTTCTGCGAAGAGGGGACG +
Preference number: 6 (lower is better)
Translates to: LGFHQSALGPRI*PTPAGFCEEGT
Trigger: CGTCCCCTCTTCGCAGAAGCCGGCCGGGGTCGGGCAGATGCGAGGGCCCAGAGCGCTCTGGTGGAAGCCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS CCA 72 bp GGAAGATGCCGCTCGAGTGCCACCGAGCAAGATGCCTaGCCGCCAATCGCTGAGCGCTCCCCGCCGTGGGCC +
Preference number: 6 (lower is better)
Translates to: GRCRSSATEQDA*PPIAERSPPWA
Trigger: GGCCCACGGCGGGGAGCGCTCAGCGATTGGCGGCCAGGCATCTTGCTCGGTGGCACTCGAGCGGCATCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS CAA 90 bp TTCTGCTCTCGGGCCTGGACGCCACCCATGGTGAGGCTCAGCCTCTaGGCCACATCCGGCCTTCCCTTGGTGAGGCTGCCCTCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: FCSRAWTPPMVRLSL*ATSGLPLVRLPSRA
Trigger: GGCCCGGGAGGGCAGCCTCACCAAGGGAAGGCCGGATGTGGCCAAGAGGCTGAGCCTCACCATGGGTGGCGTCCAGGCCCGAGAGCAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS CCA 72 bp CCTTCCCTTGGTGAGGCTGCCCTCCCGGGCCTGGCCTaGGGAGGTGCCATAATGCTCCTCCAGGCACCGCAG +
Preference number: 6 (lower is better)
Translates to: PSLGEAALPGLA*GGAIMLLQAPQ
Trigger: CTGCGGTGCCTGGAGGAGCATTATGGCACCTCCCCAGGCCAGGCCCGGGAGGGCAGCCTCACCAAGGGAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS CAA 72 bp CGGGCCTGGACGCCACCCATGGTGAGGCTCAGCCTCTaGGCCACATCCGGCCTTCCCTTGGTGAGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: RAWTPPMVRLSL*ATSGLPLVRLP
Trigger: GGGCAGCCTCACCAAGGGAAGGCCGGATGTGGCCAAGAGGCTGAGCCTCACCATGGGTGGCGTCCAGGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS GCA 72 bp TTTCGCCGTGCCGGTCCTGCCATGGGCTCTCCTGGATaGCATCCTGGGTCACAGGCGAGTTCTGCCGTGGGG +
Preference number: 6 (lower is better)
Translates to: FRRAGPAMGSPG*HPGSQASSAVG
Trigger: CCCCACGGCAGAACTCGCCTGTGACCCAGGATGGCATCCAGGAGAGCCCATGGCAGGACCGGCACGGCGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS TCA 72 bp GCAAATTCTGCTCTCGGGCCTGGACGCCACCCATGGTaGGGCTCAGCCTCTTGGCCACATCCGGCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: ANSALGPGRHPW*GSASWPHPAFP
Trigger: AGGGAAGGCCGGATGTGGCCAAGAGGCTGAGCCTCACCATGGGTGGCGTCCAGGCCCGAGAGCAGAATTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS GCA 72 bp CTCTCCTGGATGCCATCCTGGGTCACAGGCGAGTTCTaGCGTGGGGATTTGGAGTGGGGGAGGGTGCCCATG +
Preference number: 6 (lower is better)
Translates to: LSWMPSWVTGEF*RGDLEWGRVPM
Trigger: CATGGGCACCCTCCCCCACTCCAAATCCCCACGGCAGAACTCGCCTGTGACCCAGGATGGCATCCAGGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS CCA 72 bp TGCCGGTCCTGCCATGGGCTCTCCTGGATGCCATCCTaGGTCACAGGCGAGTTCTGCCGTGGGGATTTGGAG +
Preference number: 6 (lower is better)
Translates to: CRSCHGLSWMPS*VTGEFCRGDLE
Trigger: CTCCAAATCCCCACGGCAGAACTCGCCTGTGACCCAGGATGGCATCCAGGAGAGCCCATGGCAGGACCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS CCA 72 bp AAGGTTTCGCCGTGCCGGTCCTGCCATGGGCTCTCCTaGATGCCATCCTGGGTCACAGGCGAGTTCTGCCGT +
Preference number: 6 (lower is better)
Translates to: KVSPCRSCHGLS*MPSWVTGEFCR
Trigger: ACGGCAGAACTCGCCTGTGACCCAGGATGGCATCCAGGAGAGCCCATGGCAGGACCGGCACGGCGAAACCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS CCA 72 bp GGCGGTTGCCCACGTAGCAGCGCACCAGGCCGGGGATaGAGTCGAAGCTCTCCATCTCGAACTGGTACTGCA +
Preference number: 6 (lower is better)
Translates to: GGCPRSSAPGRG*SRSSPSRTGTA
Trigger: TGCAGTACCAGTTCGAGATGGAGAGCTTCGACTCCATCCCCGGCCTGGTGCGCTGCTACGTGGGCAACCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000490377.1
CDS CCA 72 bp AGGAGGTTTCCCCTGGGCAAATTCTGCTCTCGGGCCTaGACGCCACCCATGGTGAGGCTCAGCCTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: RRFPLGKFCSRA*TPPMVRLSLLA
Trigger: GGCCAAGAGGCTGAGCCTCACCATGGGTGGCGTCCAGGCCCGAGAGCAGAATTTGCCCAGGGGAAACCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS CAA 72 bp TCTGAGTTGAGCCAGGCAGAGGGAGACGAGGGAACCTaGAGGAACGGCACCTTGCAGGGCTTAGGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: SELSQAEGDEGT*RNGTLQGLGGG
Trigger: GCCCCCGCCTAAGCCCTGCAAGGTGCCGTTCCTCAAGGTTCCCTCGTCTCCCTCTGCCTGGCTCAACTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS CAA 90 bp TGCAGCCATAATTCTCAACTCGGAGAAACTCGCCTCCTCGGAGCCTaGGGCTTCCACCAGAGCGCTCTGGGCCCTCGCATCTGCCCGACC +
Preference number: 6 (lower is better)
Translates to: CSHNSQLGETRLLGA*GFHQSALGPRICPT
Trigger: GGTCGGGCAGATGCGAGGGCCCAGAGCGCTCTGGTGGAAGCCCAAGGCTCCGAGGAGGCGAGTTTCTCCGAGTTGAGAATTATGGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS GCA 72 bp AGGCATCTGGGCGATGCTCAGCGAGAGGGGACCTGCTaGTCAGAAGGTCCATGGATGAGGCCAGGGGGAACT +
Preference number: 6 (lower is better)
Translates to: RHLGDAQREGTC*SEGPWMRPGGT
Trigger: AGTTCCCCCTGGCCTCATCCATGGACCTTCTGAGCAGCAGGTCCCCTCTCGCTGAGCATCGCCCAGATGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS GCA 72 bp GGCTTCCCTGGGCACATGAGGGTAGCTTTGCTCCCCTaGCGCAGCCTGTGGCAAACGCTGGGTTCAGTTCAC +
Preference number: 6 (lower is better)
Translates to: GFPGHMRVALLP*RSLWQTLGSVH
Trigger: GTGAACTGAACCCAGCGTTTGCCACAGGCTGCGGCAGGGGAGCAAAGCTACCCTCATGTGCCCAGGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS CAA 72 bp GTTCTGTGTGGCTTCCCTGGGCACATGAGGGTAGCTTaGCTCCCCTGCCGCAGCCTGTGGCAAACGCTGGGT +
Preference number: 6 (lower is better)
Translates to: VLCGFPGHMRVA*LPCRSLWQTLG
Trigger: ACCCAGCGTTTGCCACAGGCTGCGGCAGGGGAGCAAAGCTACCCTCATGTGCCCAGGGAAGCCACACAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS GCA 72 bp TTGACGCCAGAGTTCCGGGGACCTGGCGCCTCATTCTaGTTGGCTGTGAGCAGTTCTGTGTGGCTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: LTPEFRGPGASF*LAVSSSVWLPW
Trigger: CCAGGGAAGCCACACAGAACTGCTCACAGCCAAGCAGAATGAGGCGCCAGGTCCCCGGAACTCTGGCGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS CCA 72 bp GGGCGTGGACACCCAGCATTCAAAGGAGCGATGTGCTaGAATGGTCTGGCTGCTCCCTCCACACCACGATGG +
Preference number: 6 (lower is better)
Translates to: GRGHPAFKGAMC*NGLAAPSTPRW
Trigger: CCATCGTGGTGTGGAGGGAGCAGCCAGACCATTCCAGCACATCGCTCCTTTGAATGCTGGGTGTCCACGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS CAA 72 bp AATTCTCAACTCGGAGAAACTCGCCTCCTCGGAGCCTaGGGCTTCCACCAGAGCGCTCTGGGCCCTCGCATC +
Preference number: 6 (lower is better)
Translates to: NSQLGETRLLGA*GFHQSALGPRI
Trigger: GATGCGAGGGCCCAGAGCGCTCTGGTGGAAGCCCAAGGCTCCGAGGAGGCGAGTTTCTCCGAGTTGAGAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370243.1
CDS TCA 72 bp CTCAGCGTTGTGTTTGCAGCGAGCAATCTTGAGGGATaGGGTAATGTCTCCAGACGTCGCGCGGCGGCGCTC +
Preference number: 6 (lower is better)
Translates to: LSVVFAASNLEG*GNVSRRRAAAL
Trigger: GAGCGCCGCCGCGCGACGTCTGGAGACATTACCTCATCCCTCAAGATTGCTCGCTGCAAACACAACGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649852.1
CDS GCA 72 bp AGAAGATGTGGATCCCTGAAGGTGAAGGTTTCGCCGTaGCGGTCCTGCCATGGGCTCTCCTGGATGCCATCC +
Preference number: 6 (lower is better)
Translates to: RRCGSLKVKVSP*RSCHGLSWMPS
Trigger: GGATGGCATCCAGGAGAGCCCATGGCAGGACCGGCACGGCGAAACCTTCACCTTCAGGGATCCACATCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS GCA 72 bp TACTCAGAGTGGCCGCTCGGTCCTCCAAAGTGCCCGTaGATCCCAGAATGTCCACTGCAATGCCGATGGCCA +
Preference number: 6 (lower is better)
Translates to: YSEWPLGPPKCP*IPECPLQCRWP
Trigger: TGGCCATCGGCATTGCAGTGGACATTCTGGGATGCACGGGCACTTTGGAGGACCGAGCGGCCACTCTGAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS GCA 72 bp TCTGGGCGTGGACACCCAGCATTCAAAGGAGCGATGTaGTGGAATGGTCTGGCTGCTCCCTCCACACCACGA +
Preference number: 6 (lower is better)
Translates to: SGRGHPAFKGAM*WNGLAAPSTPR
Trigger: TCGTGGTGTGGAGGGAGCAGCCAGACCATTCCAGCACATCGCTCCTTTGAATGCTGGGTGTCCACGCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS CCA 72 bp TTCTGCTTGGCTGTGAGCAGTTCTGTGTGGCTTCCCTaGGCACATGAGGGTAGCTTTGCTCCCCTGCCGCAG +
Preference number: 6 (lower is better)
Translates to: FCLAVSSSVWLP*AHEGSFAPLPQ
Trigger: CTGCGGCAGGGGAGCAAAGCTACCCTCATGTGCCCAGGGAAGCCACACAGAACTGCTCACAGCCAAGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS CCA 72 bp AGGTCCCCCATGGAATCCTTCAGTTCCACCGCCACCTaGATGATCTTACTCAGAGTGGCCGCTCGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: RSPMESFSSTAT*MILLRVAARSS
Trigger: GGAGGACCGAGCGGCCACTCTGAGTAAGATCATCCAGGTGGCGGTGGAACTGAAGGATTCCATGGGGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS TCA 72 bp CCCCCATGGAATCCTTCAGTTCCACCGCCACCTGGATaGTCTTACTCAGAGTGGCCGCTCGGTCCTCCAAAG +
Preference number: 6 (lower is better)
Translates to: PPWNPSVPPPPG*SYSEWPLGPPK
Trigger: CTTTGGAGGACCGAGCGGCCACTCTGAGTAAGATCATCCAGGTGGCGGTGGAACTGAAGGATTCCATGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS TCA 72 bp CTCAGCGTTGTGTTTGCAGCGAGCAATCTTGAGGGATaGGGTAATGTCTCCGTCTCGCAGCCCGAGGGGAGG +
Preference number: 6 (lower is better)
Translates to: LSVVFAASNLEG*GNVSVSQPEGR
Trigger: CCTCCCCTCGGGCTGCGAGACGGAGACATTACCTCATCCCTCAAGATTGCTCGCTGCAAACACAACGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS TCA 72 bp CACCCTTCTGCACACCTACAGCAGGCACTGGCTCTGTaGCTAAGATGCTCCTCCCAGGGAGTCACCTTTGGC +
Preference number: 6 (lower is better)
Translates to: HPSAHLQQALAL*LRCSSQGVTFG
Trigger: GCCAAAGGTGACTCCCTGGGAGGAGCATCTTAGTCACAGAGCCAGTGCCTGCTGTAGGTGTGCAGAAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS CAA 90 bp CTTTACTTGGGCCATTTCTCAGCGTTGTGTTTGCAGCGAGCAATCTaGAGGGATGAGGTAATGTCTCCAGACGTCGCGCGGCGGCGCTCG +
Preference number: 6 (lower is better)
Translates to: LYLGHFSALCLQRAI*RDEVMSPDVARRRS
Trigger: CGAGCGCCGCCGCGCGACGTCTGGAGACATTACCTCATCCCTCAAGATTGCTCGCTGCAAACACAACGCTGAGAAATGGCCCAAGTAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649852.1
CDS TCA 72 bp GGCAAACGCTGGGTTCAGTTCACAGTAGTTGGCCTCTaGGTTGAGCCAGGCAGAGGGAGACGAGGGAACCTT +
Preference number: 6 (lower is better)
Translates to: GKRWVQFTVVGL*VEPGRGRRGNL
Trigger: AAGGTTCCCTCGTCTCCCTCTGCCTGGCTCAACTCAGAGGCCAACTACTGTGAACTGAACCCAGCGTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS TCA 72 bp CAGGGGGAAGGAACTTTGACTCAAACTCGTTGGGCCTaGAGGAGGAGACAGTCTCCAGGAGGGGCGTCACAA +
Preference number: 6 (lower is better)
Translates to: QGEGTLTQTRWA*RRRQSPGGASQ
Trigger: TTGTGACGCCCCTCCTGGAGACTGTCTCCTCCTTCAGGCCCAACGAGTTTGAGTCAAAGTTCCTTCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS TCA 72 bp CTGTGGACGTGCAGCTTCCCCTGCACATTGCATCTCTaGATGAAGGCTTCCTCTGGAGGCCTGCATGGTGAC +
Preference number: 6 (lower is better)
Translates to: LWTCSFPCTLHL*MKASSGGLHGD
Trigger: GTCACCATGCAGGCCTCCAGAGGAAGCCTTCATTCAGAGATGCAATGTGCAGGGGAAGCTGCACGTCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS GCA 72 bp TGCCAGGATCCTCTCAGCATTCATCCGGTAGCTGTCTaGAGCCTCGGCCATGAATCGCGCTGTTGCCAAATG +
Preference number: 6 (lower is better)
Translates to: CQDPLSIHPVAV*SLGHESRCCQM
Trigger: CATTTGGCAACAGCGCGATTCATGGCCGAGGCTGCAGACAGCTACCGGATGAATGCTGAGAGGATCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000538653.1
ENST00000539242.5
CDS CCA 72 bp GATGCTCCTCCCAGGGAGTCACCTTTGGCAGGTGCCTaGACTGTGACATGGGCCACTGAACTGCTCATCATT +
Preference number: 6 (lower is better)
Translates to: DAPPRESPLAGA*TVTWATELLII
Trigger: AATGATGAGCAGTTCAGTGGCCCATGTCACAGTCCAGGCACCTGCCAAAGGTGACTCCCTGGGAGGAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS CAA 90 bp CTTTACTTGGGCCATTTCTCAGCGTTGTGTTTGCAGCGAGCAATCTaGAGGGATGAGGTAATGTCTCCGTCTCGCAGCCCGAGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: LYLGHFSALCLQRAI*RDEVMSPSRSPRGG
Trigger: GCCTCCCCTCGGGCTGCGAGACGGAGACATTACCTCATCCCTCAAGATTGCTCGCTGCAAACACAACGCTGAGAAATGGCCCAAGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS TCA 72 bp AGCCAATCGGCAGGTAGCTCTCTGACTGGTGGGCTTTaGGGGACAAGGCTCTTCTGTCCTGCATGTGATCCA +
Preference number: 6 (lower is better)
Translates to: SQSAGSSLTGGL*GTRLFCPACDP
Trigger: TGGATCACATGCAGGACAGAAGAGCCTTGTCCCTCAAAGCCCACCAGTCAGAGAGCTACCTGCCGATTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS TCA 72 bp CTCCCAGGGAGTCACCTTTGGCAGGTGCCTGGACTGTaGCATGGGCCACTGAACTGCTCATCATTCGTCTTT +
Preference number: 6 (lower is better)
Translates to: LPGSHLWQVPGL*HGPLNCSSFVF
Trigger: AAAGACGAATGATGAGCAGTTCAGTGGCCCATGTCACAGTCCAGGCACCTGCCAAAGGTGACTCCCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS GCA 72 bp GACAGAGAGTCACGAACTAGGAAGTCACCATCTCGCTaGACAAGGTTTTCAGACACCTGTCGGGGGATGCGG +
Preference number: 6 (lower is better)
Translates to: DRESRTRKSPSR*TRFSDTCRGMR
Trigger: CCGCATCCCCCGACAGGTGTCTGAAAACCTTGTGCAGCGAGATGGTGACTTCCTAGTTCGTGACTCTCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
CDS GCA 72 bp AGTATCCTAGCAACCCTGCAGTCCATGCTCAGTACGTaGTGGGCGATGACCTTGGGGTCGTTGTTGGTGAAC +
Preference number: 6 (lower is better)
Translates to: SILATLQSMLST*WAMTLGSLLVN
Trigger: GTTCACCAACAACGACCCCAAGGTCATCGCCCAGCACGTACTGAGCATGGACTGCAGGGTTGCTAGGATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS GCA 72 bp ACCACGATGGAAGCTGCTTTTGCTGATGACTGTAGCTaGGCACTGTGCCCCTCTCAACCTTCAGCATCCTCC +
Preference number: 6 (lower is better)
Translates to: TTMEAAFADDCS*ALCPSQPSASS
Trigger: GGAGGATGCTGAAGGTTGAGAGGGGCACAGTGCGCAGCTACAGTCATCAGCAAAAGCAGCTTCCATCGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS CCA 72 bp AAGGGTGCCATGTATAGACACATCTTGATAGGCATCTaGGCGATGCTCAGCGAGAGGGGACCTGCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: KGAMYRHILIGI*AMLSERGPAAQ
Trigger: CTGAGCAGCAGGTCCCCTCTCGCTGAGCATCGCCCAGATGCCTATCAAGATGTGTCTATACATGGCACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS CCA 72 bp AAGGATCAAGTAGTTGACGCCAGAGTTCCGGGGACCTaGCGCCTCATTCTGCTTGGCTGTGAGCAGTTCTGT +
Preference number: 6 (lower is better)
Translates to: KDQVVDARVPGT*RLILLGCEQFC
Trigger: ACAGAACTGCTCACAGCCAAGCAGAATGAGGCGCCAGGTCCCCGGAACTCTGGCGTCAACTACTTGATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS CCA 72 bp ATCCTAGCAACCCTGCAGTCCATGCTCAGTACGTGCTaGGCGATGACCTTGGGGTCGTTGTTGGTGAACAGT +
Preference number: 6 (lower is better)
Translates to: ILATLQSMLSTC*AMTLGSLLVNS
Trigger: ACTGTTCACCAACAACGACCCCAAGGTCATCGCCCAGCACGTACTGAGCATGGACTGCAGGGTTGCTAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS CAA 90 bp CCAGGGTCCTCAGGCCCAGTCTTTTCCACCAGCTCCCTGGGAGAGTaGTTTGGAGAAGCGATTCACAATTCGCATCCTTGCACGTTCTTC +
Preference number: 6 (lower is better)
Translates to: PGSSGPVFSTSSLGE*FGEAIHNSHPCTFF
Trigger: GAAGAACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAACTCTCCCAGGGAGCTGGTGGAAAAGACTGGGCCTGAGGACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS TCA 72 bp CTCAGAAGGTCCATGGATGAGGCCAGGGGGAACTGGTaGTTCACCGGCATGTTTCTGGGAAGGCTTGCAAAT +
Preference number: 6 (lower is better)
Translates to: LRRSMDEARGNW*FTGMFLGRLAN
Trigger: ATTTGCAAGCCTTCCCAGAAACATGCCGGTGAATCACCAGTTCCCCCTGGCCTCATCCATGGACCTTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS TCA 72 bp TGTCTTTCAATTATGTCCAGGCGCAGCTGGTGTCCGTaGGGCAAGGTAATGAGTTCCAGGCCTGAGCTCACC +
Preference number: 6 (lower is better)
Translates to: CLSIMSRRSWCP*GKVMSSRPELT
Trigger: GGTGAGCTCAGGCCTGGAACTCATTACCTTGCCTCACGGACACCAGCTGCGCCTGGACATAATTGAAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS TCA 72 bp CTTGGCAGGGGGACTTTAATGGGGAGCTCAACCCACTaGCTGCCTGAGAGCCCAGAAGTGTCATTTCTGACT +
Preference number: 6 (lower is better)
Translates to: LGRGTLMGSSTH*LPESPEVSFLT
Trigger: AGTCAGAAATGACACTTCTGGGCTCTCAGGCAGTCAGTGGGTTGAGCTCCCCATTAAAGTCCCCCTGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS GCA 72 bp GTAGCTGTCTGCAGCCTCGGCCATGAATCGCGCTGTTaGCAAATGGTTCAGCATGATTTCACAGCTCTGGTC +
Preference number: 6 (lower is better)
Translates to: VAVCSLGHESRC*QMVQHDFTALV
Trigger: GACCAGAGCTGTGAAATCATGCTGAACCATTTGGCAACAGCGCGATTCATGGCCGAGGCTGCAGACAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000538653.1
ENST00000539242.5
CDS GCA 72 bp AGCATTCAAAGGAGCGATGTGCTGGAATGGTCTGGCTaGTCCCTCCACACCACGATGGAAGCTGCTTTTGCT +
Preference number: 6 (lower is better)
Translates to: SIQRSDVLEWSG*SLHTTMEAAFA
Trigger: AGCAAAAGCAGCTTCCATCGTGGTGTGGAGGGAGCAGCCAGACCATTCCAGCACATCGCTCCTTTGAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS CAA 72 bp CTGCAGTCCATGCTCAGTACGTGCTGGGCGATGACCTaGGGGTCGTTGTTGGTGAACAGTTCTTTTGCACGT +
Preference number: 6 (lower is better)
Translates to: LQSMLSTCWAMT*GSLLVNSSFAR
Trigger: ACGTGCAAAAGAACTGTTCACCAACAACGACCCCAAGGTCATCGCCCAGCACGTACTGAGCATGGACTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS TCA 72 bp ACCTTTGGCAGGTGCCTGGACTGTGACATGGGCCACTaGACTGCTCATCATTCGTCTTTCAAAGCCAAGGAC +
Preference number: 6 (lower is better)
Translates to: TFGRCLDCDMGH*TAHHSSFKAKD
Trigger: GTCCTTGGCTTTGAAAGACGAATGATGAGCAGTTCAGTGGCCCATGTCACAGTCCAGGCACCTGCCAAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS TCA 72 bp TTTATAATGTGGTGCAGCCTGGCTGTTCCTGTAGCCTaGCCACCTGGGTTTGCATCCTGGCTCAGCTGTATG +
Preference number: 6 (lower is better)
Translates to: FIMWCSLAVPVA*PPGFASWLSCM
Trigger: CATACAGCTGAGCCAGGATGCAAACCCAGGTGGTCAGGCTACAGGAACAGCCAGGCTGCACCACATTATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490377.1
CDS CCA 72 bp TCTTCCACTGACAGGTCAGGACAAAGTTCCCAGGGCTaGACAGAGAGTCACGAACTAGGAAGTCACCATCTC +
Preference number: 6 (lower is better)
Translates to: SSTDRSGQSSQG*TESHELGSHHL
Trigger: GAGATGGTGACTTCCTAGTTCGTGACTCTCTGTCCAGCCCTGGGAACTTTGTCCTGACCTGTCAGTGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000490377.1
CDS CCA 72 bp AGGGAGTCACCTTTGGCAGGTGCCTGGACTGTGACATaGGCCACTGAACTGCTCATCATTCGTCTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: RESPLAGAWTVT*ATELLIIRLSK
Trigger: CTTTGAAAGACGAATGATGAGCAGTTCAGTGGCCCATGTCACAGTCCAGGCACCTGCCAAAGGTGACTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS CAA 72 bp TTTCTTCCGTGGAAGGGTGCCATGTATAGACACATCTaGATAGGCATCTGGGCGATGCTCAGCGAGAGGGGA +
Preference number: 6 (lower is better)
Translates to: FLPWKGAMYRHI*IGIWAMLSERG
Trigger: TCCCCTCTCGCTGAGCATCGCCCAGATGCCTATCAAGATGTGTCTATACATGGCACCCTTCCACGGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
CDS CAA 72 bp CTCCAGGCCAGCTTGGGTCAGATGAAGCAGCTCTGTTaGGAGAAGCGATTCACAATTCGCATCCTTGCACGT +
Preference number: 6 (lower is better)
Translates to: LQASLGQMKQLC*EKRFTIRILAR
Trigger: ACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAGAGCTGCTTCATCTGACCCAAGCTGGCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS CAA 72 bp GCCCAGTCTTTTCCACCAGCTCCCTGGGAGAGTTGTTaGGAGAAGCGATTCACAATTCGCATCCTTGCACGT +
Preference number: 6 (lower is better)
Translates to: AQSFPPAPWESC*EKRFTIRILAR
Trigger: ACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAACTCTCCCAGGGAGCTGGTGGAAAAGACTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS CAA 72 bp TCAGGCCCAGTCTTTTCCACCAGCTCCCTGGGAGAGTaGTTTGGAGAAGCGATTCACAATTCGCATCCTTGC +
Preference number: 6 (lower is better)
Translates to: SGPVFSTSSLGE*FGEAIHNSHPC
Trigger: GCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAACTCTCCCAGGGAGCTGGTGGAAAAGACTGGGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS CAA 90 bp CGCTCCATTAACGTCACAAGCGGCATCAGCAGTGGGACTGATACATaGTTTGGGGGAACACATGTGGACTCTCTGCCTTCATGCAGGAGT +
Preference number: 6 (lower is better)
Translates to: RSINVTSGISSGTDT*FGGTHVDSLPSCRS
Trigger: ACTCCTGCATGAAGGCAGAGAGTCCACATGTGTTCCCCCAAACAATGTATCAGTCCCACTGCTGATGCCGCTTGTGACGTTAATGGAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000538653.1
ENST00000539242.5
CDS CAA 90 bp CAGTCCATGCTCAGTACGTGCTGGGCGATGACCTTGGGGTCGTTGTaGGTGAACAGTTCTTTTGCACGTTTCAACATTGCTGTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: QSMLSTCWAMTLGSL*VNSSFARFNIAVSR
Trigger: CCTGGAAACAGCAATGTTGAAACGTGCAAAAGAACTGTTCACCAACAACGACCCCAAGGTCATCGCCCAGCACGTACTGAGCATGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS CAA 90 bp CTGCAGTCCATGCTCAGTACGTGCTGGGCGATGACCTTGGGGTCGTaGTTGGTGAACAGTTCTTTTGCACGTTTCAACATTGCTGTTTCC +
Preference number: 6 (lower is better)
Translates to: LQSMLSTCWAMTLGS*LVNSSFARFNIAVS
Trigger: GGAAACAGCAATGTTGAAACGTGCAAAAGAACTGTTCACCAACAACGACCCCAAGGTCATCGCCCAGCACGTACTGAGCATGGACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS CAA 90 bp CTAGCAACCCTGCAGTCCATGCTCAGTACGTGCTGGGCGATGACCTaGGGGTCGTTGTTGGTGAACAGTTCTTTTGCACGTTTCAACATT +
Preference number: 6 (lower is better)
Translates to: LATLQSMLSTCWAMT*GSLLVNSSFARFNI
Trigger: AATGTTGAAACGTGCAAAAGAACTGTTCACCAACAACGACCCCAAGGTCATCGCCCAGCACGTACTGAGCATGGACTGCAGGGTTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS CAA 90 bp CCATTAACGTCACAAGCGGCATCAGCAGTGGGACTGATACATTGTTaGGGGGAACACATGTGGACTCTCTGCCTTCATGCAGGAGTTTGC +
Preference number: 6 (lower is better)
Translates to: PLTSQAASAVGLIHC*GEHMWTLCLHAGVC
Trigger: GCAAACTCCTGCATGAAGGCAGAGAGTCCACATGTGTTCCCCCAAACAATGTATCAGTCCCACTGCTGATGCCGCTTGTGACGTTAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000538653.1
ENST00000539242.5
CDS CAA 90 bp AAGACCCTGATCACGCTTTACTTGGGCCATTTCTCAGCGTTGTGTTaGCAGCGAGCAATCTTGAGGGATGAGGTAATGTCTCCGTCTCGC +
Preference number: 6 (lower is better)
Translates to: KTLITLYLGHFSALC*QRAILRDEVMSPSR
Trigger: GCGAGACGGAGACATTACCTCATCCCTCAAGATTGCTCGCTGCAAACACAACGCTGAGAAATGGCCCAAGTAAAGCGTGATCAGGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS TCA 72 bp TGTTTCCAGGGGCTTATTCTCAGGGGGAAGGAACTTTaGCTCAAACTCGTTGGGCCTGAAGGAGGAGACAGT +
Preference number: 6 (lower is better)
Translates to: CFQGLILRGKEL*LKLVGPEGGDS
Trigger: ACTGTCTCCTCCTTCAGGCCCAACGAGTTTGAGTCAAAGTTCCTTCCCCCTGAGAATAAGCCCCTGGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS GCA 72 bp GTCCTCCAAAGTGCCCGTGCATCCCAGAATGTCCACTaGAATGCCGATGGCCATTGTGTTGTGTCTTTCAAT +
Preference number: 6 (lower is better)
Translates to: VLQSARASQNVH*NADGHCVVSFN
Trigger: ATTGAAAGACACAACACAATGGCCATCGGCATTGCAGTGGACATTCTGGGATGCACGGGCACTTTGGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS CCA 72 bp TGCCCGTGCATCCCAGAATGTCCACTGCAATGCCGATaGCCATTGTGTTGTGTCTTTCAATTATGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: CPCIPECPLQCR*PLCCVFQLCPG
Trigger: GCCTGGACATAATTGAAAGACACAACACAATGGCCATCGGCATTGCAGTGGACATTCTGGGATGCACGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS CCA 72 bp TTTTCCCACATGTCGGTTCCTTCAAAAGTCACAGCCTaGCGCTCCATTAACGTCACAAGCGGCATCAGCAGT +
Preference number: 6 (lower is better)
Translates to: FSHMSVPSKVTA*RSINVTSGISS
Trigger: ACTGCTGATGCCGCTTGTGACGTTAATGGAGCGCCAGGCTGTGACTTTTGAAGGAACCGACATGTGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000538653.1
ENST00000539242.5
CDS CCA 72 bp CCCAGTCTTTTCCACCAGCTCCCTGGGAGAGTTGTTTaGAGAAGCGATTCACAATTCGCATCCTTGCACGTT +
Preference number: 6 (lower is better)
Translates to: PSLFHQLPGRVV*RSDSQFASLHV
Trigger: AACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAACTCTCCCAGGGAGCTGGTGGAAAAGACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS CAA 72 bp AACGTCACAAGCGGCATCAGCAGTGGGACTGATACATaGTTTGGGGGAACACATGTGGACTCTCTGCCTTCA +
Preference number: 6 (lower is better)
Translates to: NVTSGISSGTDT*FGGTHVDSLPS
Trigger: TGAAGGCAGAGAGTCCACATGTGTTCCCCCAAACAATGTATCAGTCCCACTGCTGATGCCGCTTGTGACGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000538653.1
ENST00000539242.5
CDS CAA 90 bp AAGACCCTGATCACGCTTTACTTGGGCCATTTCTCAGCGTTGTGTTaGCAGCGAGCAATCTTGAGGGATGAGGTAATGTCTCCAGACGTC +
Preference number: 6 (lower is better)
Translates to: KTLITLYLGHFSALC*QRAILRDEVMSPDV
Trigger: GACGTCTGGAGACATTACCTCATCCCTCAAGATTGCTCGCTGCAAACACAACGCTGAGAAATGGCCCAAGTAAAGCGTGATCAGGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649852.1
CDS TCA 72 bp CACATGTGGACTCTCTGCCTTCATGCAGGAGTTTGCTaGAGGGCTTCAGCTGTTTCTCATAGAGAATGGCAG +
Preference number: 6 (lower is better)
Translates to: HMWTLCLHAGVC*RASAVSHREWQ
Trigger: CTGCCATTCTCTATGAGAAACAGCTGAAGCCCTTCAGCAAACTCCTGCATGAAGGCAGAGAGTCCACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000538653.1
ENST00000539242.5
CDS TCA 72 bp CCTGACCACCTGGGTTTGCATCCTGGCTCAGCTGTATaGCTCTGGACAAATTACATAATCTCCTTGTGGCTC +
Preference number: 6 (lower is better)
Translates to: PDHLGLHPGSAV*LWTNYIISLWL
Trigger: GAGCCACAAGGAGATTATGTAATTTGTCCAGAGTCATACAGCTGAGCCAGGATGCAAACCCAGGTGGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490377.1
CDS GCA 72 bp GTCATTTCTGACTATCTAAAGACCAGAGCATCTACTTaGTGCCATGGTTGGCTGCTGGGCTGGTTTTGGGGT +
Preference number: 6 (lower is better)
Translates to: VISDYLKTRAST*CHGWLLGWFWG
Trigger: ACCCCAAAACCAGCCCAGCAGCCAACCATGGCAGCAAGTAGATGCTCTGGTCTTTAGATAGTCAGAAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS CCA 72 bp GTGCCTCTCCTTGGAGAACTTCACATATTCCACAGTTaGGTCCAGAAGATGTGGATCCCTGTAATCCCAGCT +
Preference number: 6 (lower is better)
Translates to: VPLLGELHIFHS*VQKMWIPVIPA
Trigger: AGCTGGGATTACAGGGATCCACATCTTCTGGACCCAACTGTGGAATATGTGAAGTTCTCCAAGGAGAGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479503.2
CDS CAA 90 bp AAGGTTCTGAGGCTGGATGAAATTCTGCCCTGTACTTGCAAACATTaGCAGAACTGCTCAGTCAGCCTTCCGGGAAAACCATGCCCACAT +
Preference number: 6 (lower is better)
Translates to: KVLRLDEILPCTCKH*QNCSVSLPGKPCPH
Trigger: ATGTGGGCATGGTTTTCCCGGAAGGCTGACTGAGCAGTTCTGCAAATGTTTGCAAGTACAGGGCAGAATTTCATCCAGCCTCAGAACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS TCA 72 bp TTGGCTTTGCTGATGCTGAGTCTTGGCTCAAGGTTCTaGGGCTGGATGAAATTCTGCCCTGTACTTGCAAAC +
Preference number: 6 (lower is better)
Translates to: LALLMLSLGSRF*GWMKFCPVLAN
Trigger: GTTTGCAAGTACAGGGCAGAATTTCATCCAGCCTCAGAACCTTGAGCCAAGACTCAGCATCAGCAAAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS GCA 72 bp CCAAAGTGCCCGTGCATCCCAGAATGTCCACTGCAATaGCGATGGCCATTGTGTTGTGTCTTTCAATTATGT +
Preference number: 6 (lower is better)
Translates to: PKCPCIPECPLQ*RWPLCCVFQLC
Trigger: ACATAATTGAAAGACACAACACAATGGCCATCGGCATTGCAGTGGACATTCTGGGATGCACGGGCACTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000539242.5
CDS GCA 72 bp GGCTGGATGAAATTCTGCCCTGTACTTGCAAACATTTaGAGAACTGCTCAGTCAGCCTTCCGGGAAAACCAT +
Preference number: 6 (lower is better)
Translates to: GWMKFCPVLANI*RTAQSAFRENH
Trigger: ATGGTTTTCCCGGAAGGCTGACTGAGCAGTTCTGCAAATGTTTGCAAGTACAGGGCAGAATTTCATCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS GCA 72 bp AAGGTTCTGAGGCTGGATGAAATTCTGCCCTGTACTTaGAAACATTTGCAGAACTGCTCAGTCAGCCTTCCG +
Preference number: 6 (lower is better)
Translates to: KVLRLDEILPCT*KHLQNCSVSLP
Trigger: CGGAAGGCTGACTGAGCAGTTCTGCAAATGTTTGCAAGTACAGGGCAGAATTTCATCCAGCCTCAGAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS CCA 72 bp GTGGCCAGTTTCATATTGTTGGATGGGATGTCTCGCTaGCTTAGAGAAGCCTATCTCTTGGTAGTGGAGACA +
Preference number: 6 (lower is better)
Translates to: VASFILLDGMSR*LREAYLLVVET
Trigger: TGTCTCCACTACCAAGAGATAGGCTTCTCTAAGCCAGCGAGACATCCCATCCAACAATATGAAACTGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS CCA 72 bp CTGCAGGCTTCACCTCTCTATTTGATATCTCACAGATaGCCCGTGATGAATCATGTGACGCACAGTGCTAAG +
Preference number: 6 (lower is better)
Translates to: LQASPLYLISHR*PVMNHVTHSAK
Trigger: CTTAGCACTGTGCGTCACATGATTCATCACGGGCCATCTGTGAGATATCAAATAGAGAGGTGAAGCCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433544.1
CDS CCA 72 bp ACCATCTCGCTGCACAAGGTTTTCAGACACAGCAACTaGAGAATTTATAATGTGGTGCAGCCTGGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: TISLHKVFRHSN*RIYNVVQPGCS
Trigger: GGAACAGCCAGGCTGCACCACATTATAAATTCTCCAGTTGCTGTGTCTGAAAACCTTGTGCAGCGAGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490377.1
CDS CAA 72 bp ATGCTCAGTACGTGCTGGGCGATGACCTTGGGGTCGTaGTTGGTGAACAGTTCTTTTGCACGTTTCAACATT +
Preference number: 6 (lower is better)
Translates to: MLSTCWAMTLGS*LVNSSFARFNI
Trigger: AATGTTGAAACGTGCAAAAGAACTGTTCACCAACAACGACCCCAAGGTCATCGCCCAGCACGTACTGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000466632.1
ENST00000539242.5
CDS CAA 90 bp AGGAAATCTTGCAGAGAAGAGCAGATAAGAAATGCTCCCACAACCTaGCTCCCTTCCCCCAACACACATGTACACGTACACATACACACA +
Preference number: 6 (lower is better)
Translates to: RKSCREEQIRNAPTT*LPSPNTHVHVHIHT
Trigger: TGTGTGTATGTGTACGTGTACATGTGTGTTGGGGGAAGGGAGCAAGGTTGTGGGAGCATTTCTTATCTGCTCTTCTCTGCAAGATTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS GCA 72 bp GCTCTGTTTGGAGAAGCGATTCACAATTCGCATCCTTaGACGTTCTTCCTAGATGTGCCAAGAATGCAAGAC +
Preference number: 6 (lower is better)
Translates to: ALFGEAIHNSHP*TFFLDVPRMQD
Trigger: GTCTTGCATTCTTGGCACATCTAGGAAGAACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS GCA 72 bp GACAGAGAGTCACGAACTAGGAAGTCACCATCTCGCTaGACAAGGTTTTCAGACACAGCAACTGGAGAATTT +
Preference number: 6 (lower is better)
Translates to: DRESRTRKSPSR*TRFSDTATGEF
Trigger: AAATTCTCCAGTTGCTGTGTCTGAAAACCTTGTGCAGCGAGATGGTGACTTCCTAGTTCGTGACTCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490377.1
CDS CAA 72 bp ATCACGCTTTACTTGGGCCATTTCTCAGCGTTGTGTTaGCAGCGAGCAATCTTGAGGGATGAGGTAATGTCT +
Preference number: 6 (lower is better)
Translates to: ITLYLGHFSALC*QRAILRDEVMS
Trigger: AGACATTACCTCATCCCTCAAGATTGCTCGCTGCAAACACAACGCTGAGAAATGGCCCAAGTAAAGCGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370244.5
ENST00000469315.1
ENST00000649852.1
CDS CAA 72 bp ACGTTGACATCTCAAGGAAATGTGGCCAGTTTCATATaGTTGGATGGGATGTCTCGCTGGCTTAGAGAAGCC +
Preference number: 6 (lower is better)
Translates to: TLTSQGNVASFI*LDGMSRWLREA
Trigger: GGCTTCTCTAAGCCAGCGAGACATCCCATCCAACAATATGAAACTGGCCACATTTCCTTGAGATGTCAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS GCA 72 bp GAGTTGTTTGGAGAAGCGATTCACAATTCGCATCCTTaGACGTTCTTCCTAGATGTGCCAAGAATGCAAGAC +
Preference number: 6 (lower is better)
Translates to: ELFGEAIHNSHP*TFFLDVPRMQD
Trigger: GTCTTGCATTCTTGGCACATCTAGGAAGAACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS GCA 72 bp GCATTGTTTGGAGAAGCGATTCACAATTCGCATCCTTaGACGTTCTTCCTAGATGTGCCAAGAATGCAAGAC +
Preference number: 6 (lower is better)
Translates to: ALFGEAIHNSHP*TFFLDVPRMQD
Trigger: GTCTTGCATTCTTGGCACATCTAGGAAGAACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649852.1
CDS CAA 72 bp AGCTCTGTTTGGAGAAGCGATTCACAATTCGCATCCTaGCACGTTCTTCCTAGATGTGCCAAGAATGCAAGA +
Preference number: 6 (lower is better)
Translates to: SSVWRSDSQFAS*HVLPRCAKNAR
Trigger: TCTTGCATTCTTGGCACATCTAGGAAGAACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370244.5
CDS CAA 72 bp CGCATTGTTTGGAGAAGCGATTCACAATTCGCATCCTaGCACGTTCTTCCTAGATGTGCCAAGAATGCAAGA +
Preference number: 6 (lower is better)
Translates to: RIVWRSDSQFAS*HVLPRCAKNAR
Trigger: TCTTGCATTCTTGGCACATCTAGGAAGAACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAATGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649852.1
CDS CAA 90 bp CTTTCAACGTTGACATCTCAAGGAAATGTGGCCAGTTTCATATTGTaGGATGGGATGTCTCGCTGGCTTAGAGAAGCCTATCTCTTGGTA +
Preference number: 6 (lower is better)
Translates to: LSTLTSQGNVASFIL*DGMSRWLREAYLLV
Trigger: TACCAAGAGATAGGCTTCTCTAAGCCAGCGAGACATCCCATCCAACAATATGAAACTGGCCACATTTCCTTGAGATGTCAACGTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS CAA 90 bp ACACTTTCAACGTTGACATCTCAAGGAAATGTGGCCAGTTTCATATaGTTGGATGGGATGTCTCGCTGGCTTAGAGAAGCCTATCTCTTG +
Preference number: 6 (lower is better)
Translates to: TLSTLTSQGNVASFI*LDGMSRWLREAYLL
Trigger: CAAGAGATAGGCTTCTCTAAGCCAGCGAGACATCCCATCCAACAATATGAAACTGGCCACATTTCCTTGAGATGTCAACGTTGAAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS CAA 72 bp AGAGTTGTTTGGAGAAGCGATTCACAATTCGCATCCTaGCACGTTCTTCCTAGATGTGCCAAGAATGCAAGA +
Preference number: 6 (lower is better)
Translates to: RVVWRSDSQFAS*HVLPRCAKNAR
Trigger: TCTTGCATTCTTGGCACATCTAGGAAGAACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469315.1
CDS CAA 90 bp GTTTCTAGGTCTCCTGATTCTATATCCAGCCTTCTTGTAAACGCATaGTTTGGAGAAGCGATTCACAATTCGCATCCTTGCACGTTCTTC +
Preference number: 6 (lower is better)
Translates to: VSRSPDSISSLLVNA*FGEAIHNSHPCTFF
Trigger: GAAGAACGTGCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAATGCGTTTACAAGAAGGCTGGATATAGAATCAGGAGACCTAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649852.1
CDS TCA 72 bp AACCTCAGAGAGGTCTTGCTCAAAGTCTATAGCAGGTaGATGATACAGCTGCGATTCAAATCCAGATCATGT +
Preference number: 6 (lower is better)
Translates to: NLREVLLKVYSR*MIQLRFKSRSC
Trigger: ACATGATCTGGATTTGAATCGCAGCTGTATCATTCACCTGCTATAGACTTTGAGCAAGACCTCTCTGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS CAA 72 bp TCTCCTGATTCTATATCCAGCCTTCTTGTAAACGCATaGTTTGGAGAAGCGATTCACAATTCGCATCCTTGC +
Preference number: 6 (lower is better)
Translates to: SPDSISSLLVNA*FGEAIHNSHPC
Trigger: GCAAGGATGCGAATTGTGAATCGCTTCTCCAAACAATGCGTTTACAAGAAGGCTGGATATAGAATCAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649852.1
CDS TCA 72 bp TCAGAGAGGTCTTGCTCAAAGTCTATAGCAGGTGAATaGTACAGCTGCGATTCAAATCCAGATCATGTGTTT +
Preference number: 6 (lower is better)
Translates to: SERSCSKSIAGE*YSCDSNPDHVF
Trigger: AAACACATGATCTGGATTTGAATCGCAGCTGTATCATTCACCTGCTATAGACTTTGAGCAAGACCTCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS CAA 72 bp ATTCAAATCCAGATCATGTGTTTCCAAGCGGTGTTTTaGTATTCCACTCAAGCTGTGTTGCACCCAACTTCA +
Preference number: 6 (lower is better)
Translates to: IQIQIMCFQAVF*YSTQAVLHPTS
Trigger: TGAAGTTGGGTGCAACACAGCTTGAGTGGAATACAAAAACACCGCTTGGAAACACATGATCTGGATTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1
CDS TCA 72 bp GTTAAAATCTGGTTGAATTTCTCATATCTCTCTGTCTaGTTGACTTGTGCACCTTTGCTGCCCCATAGCAAT +
Preference number: 6 (lower is better)
Translates to: VKIWLNFSYLSV*LTCAPLLPHSN
Trigger: ATTGCTATGGGGCAGCAAAGGTGCACAAGTCAATCAGACAGAGAGATATGAGAAATTCAACCAGATTTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260502.11
ENST00000370243.1
ENST00000370244.5
ENST00000370247.7
ENST00000538653.1
ENST00000539242.5
CDS TCA 72 bp GTTCTTTTGCATTACGGGCTTATGGGTACTTTAATGTaGCTTAAATCACAGGAAATCTTGCAGAGAAGAGCA +
Preference number: 6 (lower is better)
Translates to: VLLHYGLMGTLM*LKSQEILQRRA
Trigger: TGCTCTTCTCTGCAAGATTTCCTGTGATTTAAGTCACATTAAAGTACCCATAAGCCCGTAATGCAAAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433544.1
ENST00000649852.1